Use of filter papers to determine seroprevalence of Toxoplasma gondii among hunted ungulates in remote Peruvian Amazon.

PubMed

Aston, Emily J; Mayor, Pedro; Bowman, Dwight D; Mohammed, Hussni O; Liotta, Janice L; Kwok, Oliver; Dubey, J P

2014-04-01

Toxoplasmosis is a zoonosis caused by the protozoan Toxoplasma gondii, and it is found worldwide. To determine whether ungulates are reservoirs of T. gondii in an isolated and remote region of the northeastern Peruvian Amazon, antibodies to T. gondii were determined in 5 species of ungulates by the modified agglutination test (MAT). These animals were hunted by subsistence hunters along the Yavarí-Mirín River, in the northeastern Peruvian Amazon. Blood samples were collected by hunters on filter papers. For determination of T. gondii antibodies, blood was eluted from filter papers, and a titer of 1:25 was considered indicative of exposure to T. gondii. Antibodies to T. gondii were found in 26 (31.0%) peccaries (Pecari tajacu, Tayassu pecari), six (17.1%) brocket deer (Mazama americana, Mazama gouazoubira), and four (40.0%) lowland tapir (Tapirus terrestris). We also introduced a modification to the MAT protocol that allows the extraction of fluid samples from several types of laboratory-grade filter paper, thus enabling researchers to easily adapt their approaches to the materials presented to them.

Accelerated losses of protected forests from gold mining in the Peruvian Amazon

NASA Astrophysics Data System (ADS)

Asner, Gregory P.; Tupayachi, Raul

2016-09-01

Gold mining in Amazonia involves forest removal, soil excavation, and the use of liquid mercury, which together pose a major threat to biodiversity, water quality, forest carbon stocks, and human health. Within the global biodiversity hotspot of Madre de Dios, Peru, gold mining has continued despite numerous 2012 government decrees and enforcement actions against it. Mining is now also thought to have entered federally protected areas, but the rates of miner encroachment are unknown. Here, we utilize high-resolution remote sensing to assess annual changes in gold mining extent from 1999 to 2016 throughout the Madre de Dios region, including the high-diversity Tambopata National Reserve and buffer zone. Regionally, gold mining-related losses of forest averaged 4437 ha yr-1. A temporary downward inflection in the annual growth rate of mining-related forest loss following 2012 government action was followed by a near doubling of the deforestation rate from mining in 2013-2014. The total estimated area of gold mining throughout the region increased about 40% between 2012 and 2016, including in the Tambopata National Reserve. Our results reveal an urgent need for more socio-environmental effort and law enforcement action to combat illegal gold mining in the Peruvian Amazon.

Mercury concentrations in urine of amerindian populations near oil fields in the peruvian and ecuadorian amazon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Webb, Jena, E-mail: jena.webb@mail.mcgill.ca

Background: Mercury is a global contaminant with toxic, persistent effects on human health. Petroleum extraction is an important source of elemental mercury; little is known about human exposure levels near oil fields in the Amazon basin. Objectives: To characterize mercury levels in people living near oil production sites in the Peruvian and Ecuadorian Amazon, controlling for fish consumption, occupation, source of water and socio-demographic characteristics. Methods: Analyze mercury levels in urine samples using cold vapour atomic fluorescence spectrometry from 76 indigenous men and women in eight riverine communities situated near oil wells or pipelines. Subjects answered a questionnaire soliciting socio-demographic,more » occupational and dietary information. Data were analyzed using multiple linear regression modeling. Results: The mean value of U-Hg was 2.61 μg/g creatinine (95% CI: 2.14–3.08), with 7% of the sample recording values above the global background standard suggested by The World Health Organization (5 μg/g creatinine). Women who used water from a surface source had two and a half times the amount of mercury in their urine (mean=3.70 μg/g creatinine, 95% CI: 2.26–5.15) compared with women who used other water sources (mean =1.39 μg/g creatinine, 95% CI: 0.51–2.25). Men who were involved in an oil clean-up operation had twice as much mercury in their urine (mean =3.07 μg/g creatinine, 95% CI: 1.97–4.16) as did those who worked on other tasks (mean =1.56 μg/g creatinine, 95% CI: 1.48–2.65). Mercury levels were not associated with the number of fish meals per week. Conclusions: Indigenous peoples of the Peruvian and Ecuadorian Amazon living near oil production sites generally had urine mercury levels within the global background standard suggested by the World Health Organization. Increased levels of mercury in urine were detected for men involved in oil spill remediation and for women who relied on surface water for household needs. These findings signal the need for strict safety measures to limit the amount of oil entering the waterways in Andean Amazonia so as to protect the health of indigenous people. - Highlights: • 7% of participants had levels of inorganic mercury at or exceeding levels suggested by WHO (5 μg/g creatinine). • U-Hg levels were 2.5 times higher among women using surface water than those who drew on water from a well, spring or rain. • Men who had worked cleaning up an oil spill had more than twice the amount of mercury in their urine as men who did not.« less

A Slippery Slope: Children's Perceptions of Their Role in Environmental Preservation in the Peruvian Amazon

ERIC Educational Resources Information Center

Galeano, Rebecca

2013-01-01

Despite international attention and attempts to preserve the environmental diversity of the Amazon, it is an accepted fact that those who inhabit the forest must be the ones who preserve it. This article presents an analysis of how children in small rural riverine communities along the Amazon understand the importance of environmental preservation…

Joint Force Quarterly. Number 13, Autumn 1996

DTIC Science & Technology

1996-10-01

specifically ac- knowledges a 1986 study, “Ecuadorian- Peruvian Rivalry in the Upper Amazon,” as his source. That inaccurate account by William Krieg—based...joint Peruvian -Ecuadorian and U.S. records dating from 1942 to 1949 (released this year by Peru’s foreign ministry) clarify the historical account...despite the fact that Peruvian and Ecuadorian experts agreed in September 1948 to define the small stretch of the Cordillera del Cóndor which remains

Insight on the Peruvian Amazon River: A Planform Metric Characterization of its Morphodynamics

NASA Astrophysics Data System (ADS)

Garcia, A. M. P.; Ortals, C.; Frias, C. E.; Abad, J. D.; Vizcarra, J.

2014-12-01

Starting in Peru, the Amazon River flows through Colombia and Brazil; additionally, tributaries from Bolivia, Venezuela, and Ecuador contribute to the massive river and its unique geomorphic features. Accordingly, the Amazon Basin has become an important aspect of South America; it is an area of extraordinary biodiversity, rich resources, and unique cultures. However, due to the sheer magnitude and exceptionality of the Amazon River, research regarding the morphodynamic processes that shape and define the river has been difficult. Consequently, current research has not completely understood the planform dynamics of some portions of this river that present a main channel and secondary channels known as "anabranching structures". The purpose of this research was to gain an understanding of the geomorphology of the upper Amazon, the Peruvian section, by obtaining migration rates and planform metrics, including channel count, length, width, and sinuosity, as well as island count, area, and shape. With this data, the morphodynamics of the Peruvian Amazon, especially the relationship between the main channel and its secondary channels in each "anabranching structure" along the river, could be analyzed according to correlations found between various metrics. This analysis was carried out for 5-year time spans over a period of 25 years. Preliminary results showed that the average migration rate versus channel bend radius envelope peak is lower for the secondary channels than for the main channel. However, the maximum migration rate was not always found in the main channel; for several structures, the most dynamic channels were the secondary ones. This implies a certain periodicity to the river's migratory patterns that could be related to the valley boundaries, the local channel sinuosity or geological formations in the study area.

Health, healthcare access, and use of traditional versus modern medicine in remote Peruvian Amazon communities: a descriptive study of knowledge, attitudes, and practices.

PubMed

Williamson, Jonathan; Ramirez, Ronald; Wingfield, Tom

2015-04-01

There is an urgent need for healthcare research, funding, and infrastructure in the Peruvian Amazon. We performed a descriptive study of health, health knowledge and practice, and healthcare access of 13 remote communities of the Manatí and Amazon Rivers in northeastern Peru. Eighty-five adults attending a medical boat service were interviewed to collect data on socioeconomic position, health, diagnosed illnesses, pain, healthcare access, and traditional versus modern medicine use. In this setting, poverty and gender inequality were prevalent, and healthcare access was limited by long distances to the health post and long waiting times. There was a high burden of reported pain (mainly head and musculoskeletal) and chronic non-communicable diseases, such as hypertension (19%). Nearly all participants felt that they did not completely understand their diagnosed illnesses and wanted to know more. Participants preferred modern over traditional medicine, predominantly because of mistrust or lack of belief in traditional medicine. Our findings provide novel evidence concerning transitional health beliefs, hidden pain, and chronic non-communicable disease prevalence in marginalized communities of the Peruvian Amazon. Healthcare provision was limited by a breach between health education, knowledge, and access. Additional participatory research with similar rural populations is required to inform regional healthcare policy and decision-making. © The American Society of Tropical Medicine and Hygiene.

Social and economic causes of deforestation in the Peruvian Amazon basin: Natives and colonists. Working paper

DOE Office of Scientific and Technical Information (OSTI.GOV)

Garland, E.B.

1991-03-01

The people in the Peruvian Amazon directly engaged in agriculture are the leading cause of deforestation; and can be divided into two groups, colonists and indigenous groups. The factors affecting the rate at which each group causes deforestation differ. The paper explores these differences in Peru's Upper Huallaga Valley (the principal coca producing region in the world), focusing on the interrelationships between land availability, land tenure laws, and market forces on one hand, and agricultural intensification and deforestation on the other. The study concludes that the technological decisions of the two groups are guided by diverse sets of socioeconomic factors.

[Hantavirus pulmonary syndrome (Rio Mamore virus) in the Peruvian Amazon region].

PubMed

Casapía, Martín; Mamani, Enrique; García, María P; Miraval, María L; Valencia, Pedro; Quino, Alberto H; Alvarez, Carlos; Donaires, Luis F

2012-01-01

Hantavirus infection is a viral zoonotic infection borne by rodents which most letal form clinical is the Hantavirus Pulmonary Syndrome (SPH, Spanish abbreviation). The Mamore River variant originates in South America and was found in rodents without any association to human diseases. Two cases of SPH were identified in the Peruvian Amazon region in November 2011. In both cases, a molecular diagnostic testing was conducted by the Instituto Nacional de Salud from Peru. A phylogenetic analysis of a viral genome fragment and a histopathological evaluation were conducted. Both patients developed adult respiratory distress syndrome and refractory shock. A patient died and another one recovered 12 days later.

Efficacy and Effectiveness of Mefloquine and Artesunate Combination Therapy for Uncomplicated Plasmodium falciparum Malaria in the Peruvian Amazon

PubMed Central

de Oliveira, Alexandre Macedo; Chavez, Jorge; de Leon, Gabriel Ponce; Durand, Salomon; Arrospide, Nancy; Roberts, Jacquelin; Cabezas, Cesar; Marquiño, Wilmer

2011-01-01

We evaluated the efficacy and effectiveness of mefloquine (MQ) plus artesunate (AS) to treat patients with uncomplicated malaria in the Peruvian Amazon Basin in April 2005–March 2006. Patients ≥ 1 year of age with fever (axillary temperature ≥ 37.5°C) or history of fever and Plasmodium falciparum monoinfection were included. Patients received antimalarial treatment with MQ (12.5 mg/kg/day for two days) and AS (4.0 mg/kg/day for three days) either by directly observed therapy or without directly observed therapy. After a 28-day follow-up, treatment efficacy and effectiveness were assessed on the basis of clinical and parasitologic outcomes. Ninety-six patients were enrolled in each study group; nine patients were lost to follow-up. All patients, except for one in the observed group, demonstrated adequate clinical and parasitologic response; none had detectable parasitemia on day 3. The efficacy of MQ + AS efficacy was 98.9% (95% confidence interval = 94.1–100.0%) and the effectiveness was 100.0% (95% confidence interval = 95.9–100.0%). Our study shows that MQ + AS is highly efficacious in the Peruvian Amazon. PMID:21896825

Polycystic echinococcosis in Pacas, Amazon region, Peru.

PubMed

Mayor, Pedro; Baquedano, Laura E; Sanchez, Elisabeth; Aramburu, Javier; Gomez-Puerta, Luis A; Mamani, Victor J; Gavidia, Cesar M

2015-03-01

In the Peruvian Amazon, paca meat is consumed by humans. To determine human risk for polycystic echinococcosis, we examined wild pacas from 2 villages; 15 (11.7%) of 128 were infected with Echinococcus vogeli tapeworms. High E. vogeli prevalence among pacas indicates potential risk for humans living in E. vogeli-contaminated areas.

Conservation performance of different conservation governance regimes in the Peruvian Amazon.

PubMed

Schleicher, Judith; Peres, Carlos A; Amano, Tatsuya; Llactayo, William; Leader-Williams, Nigel

2017-09-12

State-controlled protected areas (PAs) have dominated conservation strategies globally, yet their performance relative to other governance regimes is rarely assessed comprehensively. Furthermore, performance indicators of forest PAs are typically restricted to deforestation, although the extent of forest degradation is greater. We address these shortfalls through an empirical impact evaluation of state PAs, Indigenous Territories (ITs), and civil society and private Conservation Concessions (CCs) on deforestation and degradation throughout the Peruvian Amazon. We integrated remote-sensing data with environmental and socio-economic datasets, and used propensity-score matching to assess: (i) how deforestation and degradation varied across governance regimes between 2006-2011; (ii) their proximate drivers; and (iii) whether state PAs, CCs and ITs avoided deforestation and degradation compared with logging and mining concessions, and the unprotected landscape. CCs, state PAs, and ITs all avoided deforestation and degradation compared to analogous areas in the unprotected landscape. CCs and ITs were on average more effective in this respect than state PAs, showing that local governance can be equally or more effective than centralized state regimes. However, there were no consistent differences between conservation governance regimes when matched to logging and mining concessions. Future impact assessments would therefore benefit from further disentangling governance regimes across unprotected land.

Identification of Blood Meals from Potential Arbovirus Mosquito Vectors in the Peruvian Amazon Basin

PubMed Central

Palermo, Pedro M.; Aguilar, Patricia V.; Sanchez, Juan F.; Zorrilla, Víctor; Flores-Mendoza, Carmen; Huayanay, Anibal; Guevara, Carolina; Lescano, Andrés G.; Halsey, Eric S.

2016-01-01

The transmission dynamics of many arboviruses in the Amazon Basin region have not been fully elucidated, including the vectors and natural reservoir hosts. Identification of blood meal sources in field-caught mosquitoes could yield information for identifying potential arbovirus vertebrate hosts. We identified blood meal sources in 131 mosquitoes collected from areas endemic for arboviruses in the Peruvian Department of Loreto by sequencing polymerase chain reaction amplicons of the cytochrome b gene. Psorophora (Janthinosoma) albigenu, Psorophora (Grabhamia) cingulata, Mansonia humeralis, Anopheles oswaldoi s.l., and Anopheles benarrochi s.l. had mainly anthropophilic feeding preferences; Aedes (Ochlerotatus) serratus, and Aedes (Ochlerotatus) fulvus had feeding preferences for peridomestic animals; and Culex (Melanoconion) spp. fed on a variety of vertebrates, mainly rodents (spiny rats), birds, and amphibians. On the basis of these feeding preferences, many mosquitoes could be considered as potential enzootic and bridge arbovirus vectors in the Amazon Basin of Peru. PMID:27621304

Hydrological Predictability for the Peruvian Amazon

NASA Astrophysics Data System (ADS)

Towner, Jamie; Stephens, Elizabeth; Cloke, Hannah; Bazo, Juan; Coughlan, Erin; Zsoter, Ervin

2017-04-01

Population growth in the Peruvian Amazon has prompted the expansion of livelihoods further into the floodplain and thus increasing vulnerability to the annual rise and fall of the river. This growth has coincided with a period of increasing hydrological extremes with more frequent severe flood events. The anticipation and forecasting of these events is crucial for mitigating vulnerability. Forecast-based Financing (FbF) an initiative of the German Red Cross implements risk reducing actions based on threshold exceedance within hydrometeorological forecasts using the Global Flood Awareness System (GloFAS). However, the lead times required to complete certain actions can be long (e.g. several weeks to months ahead to purchase materials and reinforce houses) and are beyond the current capabilities of GloFAS. Therefore, further calibration of the model is required in addition to understanding the climatic drivers and associated hydrological response for specific flood events, such as those observed in 2009, 2012 and 2015. This review sets out to determine the current capabilities of the GloFAS model while exploring the limits of predictability for the Amazon basin. More specifically, how the temporal patterns of flow within the main coinciding tributaries correspond to the overall Amazonian flood wave under various climatic and meteorological influences. Linking the source areas of flow to predictability within the seasonal forecasting system will develop the ability to expand the limit of predictability of the flood wave. This presentation will focus on the Iquitos region of Peru, while providing an overview of the new techniques and current challenges faced within seasonal flood prediction.

Patterns of Geographic Expansion of Aedes aegypti in the Peruvian Amazon

PubMed Central

Guagliardo, Sarah Anne; Barboza, José Luis; Morrison, Amy C.; Astete, Helvio; Vazquez-Prokopec, Gonzalo; Kitron, Uriel

2014-01-01

Background and Objectives In the Peruvian Amazon, the dengue vector Aedes aegypti is abundant in large urban centers such as Iquitos. In recent years, it has also been found in a number of neighboring rural communities with similar climatic and socioeconomic conditions. To better understand Ae. aegypti spread, we compared characteristics of communities, houses, and containers in infested and uninfested communities. Methods We conducted pupal-demographic surveys and deployed ovitraps in 34 communities surrounding the city of Iquitos. Communities surveyed were located along two transects: the Amazon River and a 95km highway. We calculated entomological indices, mapped Ae. aegypti presence, and developed univariable and multivariable logistic regression models to predict Ae. aegypti presence at the community, household, or container level. Results Large communities closer to Iquitos were more likely to be infested with Ae. aegypti. Within infested communities, houses with Ae. aegypti had more passively-filled containers and were more often infested with other mosquito genera than houses without Ae. aegypti. For containers, large water tanks/drums and containers with solar exposure were more likely to be infested with Ae. aegypti. Maps of Ae. aegypti presence revealed a linear pattern of infestation along the highway, and a scattered pattern along the Amazon River. We also identified the geographical limit of Ae. aegypti expansion along the highway at 19.3 km south of Iquitos. Conclusion In the Peruvian Amazon, Ae. aegypti geographic spread is driven by human transportation networks along rivers and highways. Our results suggest that urban development and oviposition site availability drive Ae. aegypti colonization along roads. Along rivers, boat traffic is likely to drive long-distance dispersal via unintentional transport of mosquitoes on boats. PMID:25101786

Patterns of geographic expansion of Aedes aegypti in the Peruvian Amazon.

PubMed

Guagliardo, Sarah Anne; Barboza, José Luis; Morrison, Amy C; Astete, Helvio; Vazquez-Prokopec, Gonzalo; Kitron, Uriel

2014-08-01

In the Peruvian Amazon, the dengue vector Aedes aegypti is abundant in large urban centers such as Iquitos. In recent years, it has also been found in a number of neighboring rural communities with similar climatic and socioeconomic conditions. To better understand Ae. aegypti spread, we compared characteristics of communities, houses, and containers in infested and uninfested communities. We conducted pupal-demographic surveys and deployed ovitraps in 34 communities surrounding the city of Iquitos. Communities surveyed were located along two transects: the Amazon River and a 95 km highway. We calculated entomological indices, mapped Ae. aegypti presence, and developed univariable and multivariable logistic regression models to predict Ae. aegypti presence at the community, household, or container level. Large communities closer to Iquitos were more likely to be infested with Ae. aegypti. Within infested communities, houses with Ae. aegypti had more passively-filled containers and were more often infested with other mosquito genera than houses without Ae. aegypti. For containers, large water tanks/drums and containers with solar exposure were more likely to be infested with Ae. aegypti. Maps of Ae. aegypti presence revealed a linear pattern of infestation along the highway, and a scattered pattern along the Amazon River. We also identified the geographical limit of Ae. aegypti expansion along the highway at 19.3 km south of Iquitos. In the Peruvian Amazon, Ae. aegypti geographic spread is driven by human transportation networks along rivers and highways. Our results suggest that urban development and oviposition site availability drive Ae. aegypti colonization along roads. Along rivers, boat traffic is likely to drive long-distance dispersal via unintentional transport of mosquitoes on boats.

Polycystic Echinococcosis in Pacas, Amazon Region, Peru

PubMed Central

Mayor, Pedro; Baquedano, Laura E.; Sanchez, Elisabeth; Aramburu, Javier; Gomez-Puerta, Luis A.; Mamani, Victor J.

2015-01-01

In the Peruvian Amazon, paca meat is consumed by humans. To determine human risk for polycystic echinococcosis, we examined wild pacas from 2 villages; 15 (11.7%) of 128 were infected with Echinococcus vogeli tapeworms. High E. vogeli prevalence among pacas indicates potential risk for humans living in E. vogeli–contaminated areas. PMID:25695937

Micro-epidemiology and spatial heterogeneity of P. vivax parasitaemia in riverine communities of the Peruvian Amazon: A multilevel analysis.

PubMed

Carrasco-Escobar, Gabriel; Gamboa, Dionicia; Castro, Marcia C; Bangdiwala, Shrikant I; Rodriguez, Hugo; Contreras-Mancilla, Juan; Alava, Freddy; Speybroeck, Niko; Lescano, Andres G; Vinetz, Joseph M; Rosas-Aguirre, Angel; Llanos-Cuentas, Alejandro

2017-08-14

Malaria has steadily increased in the Peruvian Amazon over the last five years. This study aimed to determine the parasite prevalence and micro-geographical heterogeneity of Plasmodium vivax parasitaemia in communities of the Peruvian Amazon. Four cross-sectional active case detection surveys were conducted between May and July 2015 in four riverine communities in Mazan district. Analysis of 2785 samples of 820 individuals nested within 154 households for Plasmodium parasitaemia was carried out using light microscopy and qPCR. The spatio-temporal distribution of Plasmodium parasitaemia, dominated by P. vivax, was shown to cluster at both household and community levels. Of enrolled individuals, 47% had at least one P. vivax parasitaemia and 10% P. falciparum, by qPCR, both of which were predominantly sub-microscopic and asymptomatic. Spatial analysis detected significant clustering in three communities. Our findings showed that communities at small-to-moderate spatial scales differed in P. vivax parasite prevalence, and multilevel Poisson regression models showed that such differences were influenced by factors such as age, education, and location of households within high-risk clusters, as well as factors linked to a local micro-geographic context, such as travel and occupation. Complex transmission patterns were found to be related to human mobility among communities in the same micro-basin.

Morphological and genetic diversity of camu-camu [Myrciaria dubia (Kunth) McVaugh] in the Peruvian Amazon

PubMed Central

Šmíd, Jan; Kalousová, Marie; Mandák, Bohumil; Houška, Jakub; Chládová, Anna; Pinedo, Mario

2017-01-01

Camu-camu [Myrciaria dubia (Kunth) McVaugh] is currently an important and promising fruit species grown in the Peruvian Amazon, as well as in Brazil, Colombia, and Bolivia. The species is valued for its high content of fruit-based vitamin C. Large plantations have been established only in the last two decades, and a substantial part of the production is still obtained by collecting fruits from the wild. Domestication of the species is at an early stage; most farmers cultivate the plants without any breeding, or only through a simple mass selection process. The main objective of the study was to characterize morphological and genetic variation within and among cultivated and natural populations of camu-camu in the Peruvian Amazon. In total, we sampled 13 populations: ten wild in the Iquitos region, and three cultivated in the Pucallpa region in the Peruvian Amazon. To assess the genetic diversity using seven microsatellite loci, we analyzed samples from ten individual trees per each population (n = 126). Morphological data was collected from five trees from each population (n = 65). The analysis did not reveal statistically significant differences for most of the morphological descriptors. For wild and cultivated populations, the observed heterozygosity was 0.347 and 0.404 (expected 0.516 and 0.506), and the fixation index was 0.328 and 0.200, respectively. Wild populations could be divided into two groups according to the UPGMA and STRUCTURE analysis. In cultivated populations, their approximate origin was determined. Our findings indicate a high genetic diversity among the populations, but also a high degree of inbreeding within the populations. This can be explained by either the isolation of these populations from each other or the low number of individuals in some populations. This high level of genetic diversity can be explored for the selection of superior individuals for further breeding. PMID:28658316

Morphological and genetic diversity of camu-camu [Myrciaria dubia (Kunth) McVaugh] in the Peruvian Amazon.

PubMed

Šmíd, Jan; Kalousová, Marie; Mandák, Bohumil; Houška, Jakub; Chládová, Anna; Pinedo, Mario; Lojka, Bohdan

2017-01-01

Camu-camu [Myrciaria dubia (Kunth) McVaugh] is currently an important and promising fruit species grown in the Peruvian Amazon, as well as in Brazil, Colombia, and Bolivia. The species is valued for its high content of fruit-based vitamin C. Large plantations have been established only in the last two decades, and a substantial part of the production is still obtained by collecting fruits from the wild. Domestication of the species is at an early stage; most farmers cultivate the plants without any breeding, or only through a simple mass selection process. The main objective of the study was to characterize morphological and genetic variation within and among cultivated and natural populations of camu-camu in the Peruvian Amazon. In total, we sampled 13 populations: ten wild in the Iquitos region, and three cultivated in the Pucallpa region in the Peruvian Amazon. To assess the genetic diversity using seven microsatellite loci, we analyzed samples from ten individual trees per each population (n = 126). Morphological data was collected from five trees from each population (n = 65). The analysis did not reveal statistically significant differences for most of the morphological descriptors. For wild and cultivated populations, the observed heterozygosity was 0.347 and 0.404 (expected 0.516 and 0.506), and the fixation index was 0.328 and 0.200, respectively. Wild populations could be divided into two groups according to the UPGMA and STRUCTURE analysis. In cultivated populations, their approximate origin was determined. Our findings indicate a high genetic diversity among the populations, but also a high degree of inbreeding within the populations. This can be explained by either the isolation of these populations from each other or the low number of individuals in some populations. This high level of genetic diversity can be explored for the selection of superior individuals for further breeding.

Morphology of the oxyurid nematodes Trypanoxyuris (T.) cacajao n. sp. and T. (T.) ucayalii n. sp. from the red uakari monkey Cacajao calvus ucayalii in the Peruvian Amazon.

PubMed

Conga, D F; Giese, E G; Serra-Freire, N M; Bowler, M; Mayor, P

2016-07-01

Cacajao calvus ucayalii (Thomas, 1928) (Primates: Pitheciidae), a subspecies endemic to the Peruvian Amazon, occurs in patchy and sometimes isolated populations in north-eastern Peru and is in a vulnerable situation, mainly due to habitat loss and hunting. This rareness and remote distribution means that, until now, parasitical studies have been limited. Based on optical and scanning electron microscopy of specimens of both sexes, we report two new species of Trypanoxyuris pinworms occurring in the large intestine of the Peruvian red uakari, namely Trypanoxyuris (Trypanoxyuris) cacajao and Trypanoxyuris (Trypanoxyuris) ucayalii. Both species showed a distinct morphology of the lips and cephalic structure. Sexual dimorphism in the lateral alae was observed in both male and the female worms, with ventral ornamentation being shown in the oesophageal teeth. The finding of these new pinworm species highlights the possibility of discovering other species.

Susceptibility of Peruvian Mosquitoes to Eastern Equine Encephalitis virus

DTIC Science & Technology

2008-07-01

the Amazon Basin, near Iquitos, Peru , and used in experimental studies to evaluate their susceptibility to strains of eastern equine encephalitis virus...the repeated isolation of strains of EEEV from Cx. pedroi captured in the Amazon Basin region of Peru , suggests that Cx. pedroi may be the primary...in the Amazon Basin region in Peru , mosquitoes were cap- tured and identiÞed and tested for arboviruses (Pecor et al. 2000, Jones et al. 2004, Turell

Act No. 24994 of 19 January 1989. Basic Law on the Rural Development of the Peruvian Amazon Region.

PubMed

1989-01-01

This Act sets forth the government's policy on rural development of the Peruvian Amazon region. Major objectives of the Act include the promotion of new rural settlements in the Amazon region, the promotion of migration from the Andes to the Amazon region, and the stimulation of agriculture, livestock, and forestry activities in the Amazon region. The following are the means that the government will use, among others, to attain these goals: 1) the development of Population Displacement Programmes, which will give individual persons and families economic and logistic support in moving; 2) the establishment of Civic Colonizing Services, temporary mobile units, which will offer settlers health services, education services, technical assistance with respect to agriculture and livestock, and promotional credits; 3) the creation of the Council for Amazon River Transport to coordinate and recommend activities to improve river transport; 4) the granting to settlers of land, free education for their children, medical care, technical training and assistance with respect to agriculture, and a supply of seeds; 5) the exemption of certain investors from payment of income taxes; and 6) the granting of a wide range of incentives for agricultural production. The Act also creates a Council for Planning and Development in the Amazon Region to draw up and approve a Plan for the Development of the Amazon Region. It calls for the rational use of the natural resources of the Amazon Region in the framework of preserving the ecosystem and preventing its ruin and delegates to the regional governments the authority to enter into contracts on the use of forest materials and to undertake reforestation programs. Finally, the Act provides various guarantees for the native population, including guarantees with respect to land and preservation of ethnic and social identity.

Determining risk for severe leptospirosis by molecular analysis of environmental surface waters for pathogenic Leptospira.

PubMed

Ganoza, Christian A; Matthias, Michael A; Collins-Richards, Devon; Brouwer, Kimberly C; Cunningham, Calaveras B; Segura, Eddy R; Gilman, Robert H; Gotuzzo, Eduardo; Vinetz, Joseph M

2006-08-01

Although previous data indicate that the overall incidence of human leptospirosis in the Peruvian Amazon is similar in urban and rural sites, severe leptospirosis has been observed only in the urban context. As a potential explanation for this epidemiological observation, we tested the hypothesis that concentrations of more virulent Leptospira would be higher in urban than in rural environmental surface waters. A quantitative real-time PCR assay was used to compare levels of Leptospira in urban and rural environmental surface waters in sites in the Peruvian Amazon region of Iquitos. Molecular taxonomic analysis of a 1,200-bp segment of the leptospiral 16S ribosomal RNA gene was used to identify Leptospira to the species level. Pathogenic Leptospira species were found only in urban slum water sources (Fisher's exact test; p = 0.013). The concentration of pathogen-related Leptospira was higher in urban than rural water sources (approximately 10(3) leptospires/ml versus 0.5 x 10(2) leptospires/ml; F = 8.406, p < 0.05). Identical 16S rRNA gene sequences from Leptospira interrogans serovar Icterohaemorrhagiae were found in urban slum market area gutter water and in human isolates, suggesting a specific mode of transmission from rats to humans. In a prospective, population-based study of patients presenting with acute febrile illness, isolation of L. interrogans-related leptospires from humans was significantly associated with urban acquisition (75% of urban isolates); human isolates of other leptospiral species were associated with rural acquisition (78% of rural isolates) (chi-square analysis; p < 0.01). This distribution of human leptospiral isolates mirrored the distribution of leptospiral 16S ribosomal gene sequences in urban and rural water sources. Our findings data support the hypothesis that urban severe leptospirosis in the Peruvian Amazon is associated with higher concentrations of more pathogenic leptospires at sites of exposure and transmission. This combined quantitative and molecular taxonomical risk assessment of environmental surface waters is globally applicable for assessing risk for leptospiral infection and severe disease in leptospirosis-endemic regions.

Determining Risk for Severe Leptospirosis by Molecular Analysis of Environmental Surface Waters for Pathogenic Leptospira

PubMed Central

Collins-Richards, Devon; Brouwer, Kimberly C; Cunningham, Calaveras B; Segura, Eddy R; Gilman, Robert H; Gotuzzo, Eduardo; Vinetz, Joseph M

2006-01-01

Background Although previous data indicate that the overall incidence of human leptospirosis in the Peruvian Amazon is similar in urban and rural sites, severe leptospirosis has been observed only in the urban context. As a potential explanation for this epidemiological observation, we tested the hypothesis that concentrations of more virulent Leptospira would be higher in urban than in rural environmental surface waters. Methods and Findings A quantitative real-time PCR assay was used to compare levels of Leptospira in urban and rural environmental surface waters in sites in the Peruvian Amazon region of Iquitos. Molecular taxonomic analysis of a 1,200-bp segment of the leptospiral 16S ribosomal RNA gene was used to identify Leptospira to the species level. Pathogenic Leptospira species were found only in urban slum water sources (Fisher's exact test; p = 0.013). The concentration of pathogen-related Leptospira was higher in urban than rural water sources (~103 leptospires/ml versus 0.5 × 102 leptospires/ml; F = 8.406, p < 0.05). Identical 16S rRNA gene sequences from Leptospira interrogans serovar Icterohaemorrhagiae were found in urban slum market area gutter water and in human isolates, suggesting a specific mode of transmission from rats to humans. In a prospective, population-based study of patients presenting with acute febrile illness, isolation of L. interrogans-related leptospires from humans was significantly associated with urban acquisition (75% of urban isolates); human isolates of other leptospiral species were associated with rural acquisition (78% of rural isolates) (chi-square analysis; p < 0.01). This distribution of human leptospiral isolates mirrored the distribution of leptospiral 16S ribosomal gene sequences in urban and rural water sources. Conclusions Our findings data support the hypothesis that urban severe leptospirosis in the Peruvian Amazon is associated with higher concentrations of more pathogenic leptospires at sites of exposure and transmission. This combined quantitative and molecular taxonomical risk assessment of environmental surface waters is globally applicable for assessing risk for leptospiral infection and severe disease in leptospirosis-endemic regions. PMID:16933963

Vector Competence of Peruvian Mosquitoes (Diptera:Culicidae) for a Subtype IIIC Strain in the Venezuelan Equine Encephalomyelitis Complex Isolated from Mosquitoes Captured in Peru

DTIC Science & Technology

2006-03-01

Amazon Basin, near Iquitos, Peru , for their suscep- tibility to a subtype IIIC strain of the Venezuelan equine encephalomyelitis complex. This virus...As part of a field ecology study of mosquitoes in the Amazon Basin region of Peru (Jones et al. 2004), over 160 virus isolations were made from...distribution unlimited 13. SUPPLEMENTARY NOTES 14. ABSTRACT We evaluated mosquitoes collected in the Amazon Basin, near Iquitos, Peru , for their

Effects of Point Mutations in Plasmodium falciparum Dihydrofolate Reductase and Dihydropterate Synthase Genes on Clinical Outcomes and In Vitro Susceptibility to Sulfadoxine and Pyrimethamine

DTIC Science & Technology

2009-08-01

therapeutic efficacy of SP in two locations in the Amazon rainforest region of Peru, and to correlate the presence of molecular markers associated with...pyrimethamine at two locations in the Peruvian Amazon enrolling 99 patients of which, 86 patients completed the protocol specified 28 day follow up. Our...the Amazon basin, it may be possible to predict treatment failure with sulfadoxine- pyrimethamine equally well by determination of either of the

Identification of Blood Meals from Potential Arbovirus Mosquito Vectors in the Peruvian Amazon Basin.

PubMed

Palermo, Pedro M; Aguilar, Patricia V; Sanchez, Juan F; Zorrilla, Víctor; Flores-Mendoza, Carmen; Huayanay, Anibal; Guevara, Carolina; Lescano, Andrés G; Halsey, Eric S

2016-11-02

The transmission dynamics of many arboviruses in the Amazon Basin region have not been fully elucidated, including the vectors and natural reservoir hosts. Identification of blood meal sources in field-caught mosquitoes could yield information for identifying potential arbovirus vertebrate hosts. We identified blood meal sources in 131 mosquitoes collected from areas endemic for arboviruses in the Peruvian Department of Loreto by sequencing polymerase chain reaction amplicons of the cytochrome b gene. Psorophora (Janthinosoma) albigenu, Psorophora (Grabhamia) cingulata, Mansonia humeralis, Anopheles oswaldoi s.l., and Anopheles benarrochi s.l. had mainly anthropophilic feeding preferences; Aedes (Ochlerotatus) serratus, and Aedes (Ochlerotatus) fulvus had feeding preferences for peridomestic animals; and Culex (Melanoconion) spp. fed on a variety of vertebrates, mainly rodents (spiny rats), birds, and amphibians. On the basis of these feeding preferences, many mosquitoes could be considered as potential enzootic and bridge arbovirus vectors in the Amazon Basin of Peru. © The American Society of Tropical Medicine and Hygiene.

Integrating Language Documentation, Language Preservation, and Linguistic Research: Working with the Kokamas from the Amazon

ERIC Educational Resources Information Center

Vallejos, Rosa

2014-01-01

This paper highlights the role of speech community members on a series of interconnected projects to document, study and maintain Kokama, a deeply endangered language from the Peruvian Amazon. The remaining fluent speakers of the language are mostly older than 60 years of age, are spread out across various small villages, and speak the language in…

The occurrence and frequency of Witches’ Broom Disease associated with Wild Cacao from the Upper Amazon of Peru

USDA-ARS?s Scientific Manuscript database

The Peruvian Amazon is within the center of origin and diversity for cacao (Theobroma cacao). One of the primary disease of cacao in Peru and Latin America is withes’ broom disease (WBD) caused by Moniliophthora perniciosa. The objective of this study was to determine the incidence of WBD in wild ca...

Hair Mercury Level is Associated with Anemia and Micronutrient Status in Children Living Near Artisanal and Small-Scale Gold Mining in the Peruvian Amazon.

PubMed

Weinhouse, Caren; Ortiz, Ernesto J; Berky, Axel J; Bullins, Paige; Hare-Grogg, John; Rogers, Laura; Morales, Ana-Maria; Hsu-Kim, Heileen; Pan, William K

2017-12-01

Anemia has been widely studied in global health contexts because of severe nutritional deficiency, and more recently, inflammatory status, but chemical exposures are rarely considered. Until recently, "anemia" was used synonymously with "iron deficiency anemia (IDA)" in global health settings. However, only 50% of anemia cases worldwide are IDA. Environmental toxicology studies of anemia risk have generally focused on populations in developed countries, albeit with high exposure to environmental toxicants, such as lead or cadmium. In the developing world, toxicant exposures commonly coexist with other risk factors for anemia. In particular, artisanal and small-scale gold mining (ASGM) communities are at risk for dietary methylmercury exposure through contaminated fish consumption, and for anemia due to food insecurity and infectious and chronic diseases. Here, we report analysis of total hair mercury content, hemoglobin, and serum micronutrient levels in children < 12 years of age ( N = 83) near ASGM in the Peruvian Amazon. Forty-nine percent ( N = 29/59) of those aged < 5 years were anemic (< 11 g/dL) and 52% ( N = 12/23) of those aged 5-11 years (< 11.5 g/dL). Few children were stunted, wasted, or micronutrient deficient. Median total hair mercury was 1.18 μg/g (range: 0.06-9.70 μg/g). We found an inverse association between total mercury and hemoglobin (β = -0.12 g/dL, P = 0.06) that persisted (β = -0.14 g/dL, P = 0.04) after adjusting for age, sex, anthropometrics, and vitamin B 12 in multivariate regression. This study provides preliminary evidence that methylmercury exposure is associated with anemia, which is especially relevant to children living near ASGM.

Use of filter papers to determine seroprevalence of Toxoplasma gondii among hunted ungulates in remote Peruvian Amazon☆

PubMed Central

Aston, Emily J.; Mayor, Pedro; Bowman, Dwight D.; Mohammed, Hussni O.; Liotta, Janice L.; Kwok, Oliver; Dubey, J.P.

2013-01-01

Toxoplasmosis is a zoonosis caused by the protozoan Toxoplasma gondii, and it is found worldwide. To determine whether ungulates are reservoirs of T. gondii in an isolated and remote region of the northeastern Peruvian Amazon, antibodies to T. gondii were determined in 5 species of ungulates by the modified agglutination test (MAT). These animals were hunted by subsistence hunters along the Yavarí-Mirín River, in the northeastern Peruvian Amazon. Blood samples were collected by hunters on filter papers. For determination of T. gondii antibodies, blood was eluted from filter papers, and a titer of 1:25 was considered indicative of exposure to T. gondii. Antibodies to T. gondii were found in 26 (31.0%) peccaries (Pecari tajacu, Tayassu pecari), six (17.1%) brocket deer (Mazama americana, Mazama gouazoubira), and four (40.0%) lowland tapir (Tapirus terrestris). We also introduced a modification to the MAT protocol that allows the extraction of fluid samples from several types of laboratory-grade filter paper, thus enabling researchers to easily adapt their approaches to the materials presented to them. PMID:24918073

Genetic diversity and structure of managed and semi-natural populations of cocoa (Theobroma cacao) in the Huallaga and Ucayali Valleys of Peru.

PubMed

Zhang, Dapeng; Arevalo-Gardini, Enrique; Mischke, Sue; Zúñiga-Cernades, Luis; Barreto-Chavez, Alejandro; Del Aguila, Jorge Adriazola

2006-09-01

Cocoa (Theobroma cacao) is indigenous to the Amazon region of South America, and it is well known that the Peruvian Amazon harbours a large number of diverse cocoa populations. A small fraction of the diversity has been collected and maintained as an ex-situ germplasm repository in Peru. However, incorrect labelling of accessions and lack of information on genetic diversity have hindered efficient conservation and use of this germplasm. This study targeted assessment of genetic diversity and population structure in a managed and a semi-natural population. Using a capillary electrophoresis genotyping system, 105 cocoa accessions collected from the Huallaga and Ucayali valleys of Peru were fingerprinted. Based on 15 loci SSR profiles, genetic identity was examined for each accession and duplicates identified, population structure assessed and genetic diversity analysed in these two populations. Ten synonymous mislabelled groups were identified among the 105 accessions. The germplasm group in the Huallaga valley was clearly separated from the group in Ucayali valley by the Bayesian assignment test. The Huallaga group has lower genetic diversity, both in terms of allelic richness and of gene diversity, than the Ucayali group. Analysis of molecular variance suggested genetic substructure in the Ucayali group. Significant spatial correlation between genetic distance and geographical distances was detected in the Ucayali group by Mantel tests. These results substantiate the hypothesis that the Peruvian Amazon hosts a high level of cocoa genetic diversity, and the diversity has a spatial structure. The introduction of exotic seed populations into the Peruvian Amazon is changing the cocoa germplasm spectrum in this region. The spatial structure of cocoa diversity recorded here highlights the need for additional collecting and conservation measures for natural and semi-natural cocoa populations.

Fasciola hepatica Infection in an Indigenous Community of the Peruvian Jungle

PubMed Central

Cabada, Miguel M.; Castellanos-Gonzalez, Alejandro; Lopez, Martha; Caravedo, María Alejandra; Arque, Eulogia; White, Arthur Clinton

2016-01-01

Fasciola hepatica is a zoonotic infection with a worldwide distribution. Autochthonous cases have not been reported in the Amazon region of Peru. Operculated eggs resembling F. hepatica were identified in the stools of five out of 215 subjects in a remote indigenous community of the Peruvian jungle. Polymerase chain reaction targeting Fasciola hepatica cytochrome oxidase subunit 1 (COI) gene and sequencing of the products confirmed Fasciola infection. PMID:26976892

Understanding moisture recycling for atmospheric river management in Amazonian communities

NASA Astrophysics Data System (ADS)

Weng, Wei; Luedeke, Matthias; Zemp, Delphine-Clara; Lakes, Tobia; Pradhan, Prajal; Kropp, Juergen

2017-04-01

The invisible atmospheric transports of moisture have recently attracted more research efforts into understanding their structures, processes involved and their function as an ecosystem service. Current attention has been focused on larger scale analysis such as studying global or continental level moisture recycling. Here we applied a water balance model to backtrack the flying river that sustains two local communities in the Colombian and Peruvian Amazon where vulnerable communities rely highly on the rainfall for agricultural practices. By utilising global precipitation (TRMM Multisatillite Precipitation Analysis; TMPA) and evapotranspiration products (Moderate Resolution Imaging Spectroradiometer MODIS, MOD16ET) as input data in the present modelling experiments to compensate the sparse ground observation data in these regions, the moisture recycling process targeting the two amazonian communities which has not yet been explored quantitatively has been shown. The TMPA was selected because of its proved comparativeness with observation data in its precipitation estimations over Amazon regions while the MOD16ET data was chosen for being validated by previous studies in the Amazon basin and for reported good performance. In average, 45.5 % of the precipitation occurring to Caquetá region in Colombia is of terrestrial origin from the South American continent while 48.2% of the total rainfall received by Peruvian Yurimaguas is also from the South American land sources. The spatial distribution of the precipitationsheds (defined previously as the upwind contribution of evapotranspiration to a specific location's precipitation) shows transboundary and transnational shares in the moisture contributors of the precipitation for both regions. An interesting reversed upstream-downstream roles can be observed when the upstream regions in traditional watershed thinking become downstream areas considering precipitationsheds and flying rivers. Strong seasonal variations are also detected by our results. Since undergoing rapid land cultivation expansion in the precipitationsheds of these study areas can potentially alter the moisture recycling process which sustains ecosystem and communities, the tele-connection linking the contributors and recipients presented in this study has highlighted that region-wise collaboration and communication will be essential for an adaptive Amazonia facing environmental change, especially in regards to its vulnerable communities.

Healthcare Access and Health Beliefs of the Indigenous Peoples in Remote Amazonian Peru

PubMed Central

Brierley, Charlotte K.; Suarez, Nicolas; Arora, Gitanjli; Graham, Devon

2014-01-01

Little is published about the health issues of traditional communities in the remote Peruvian Amazon. This study assessed healthcare access, health perceptions, and beliefs of the indigenous population along the Ampiyacu and Yaguasyacu rivers in north-eastern Peru. One hundred and seventy-nine adult inhabitants of 10 remote settlements attending health clinics were interviewed during a medical services trip in April 2012. Demographics, health status, access to healthcare, health education, sanitation, alcohol use, and smoke exposure were recorded. Our findings indicate that poverty, household overcrowding, and poor sanitation remain commonplace in this group. Furthermore, there are poor levels of health education and on-going barriers to accessing healthcare. Healthcare access and health education remain poor in the remote Peruvian Amazon. This combined with poverty and its sequelae render this population vulnerable to disease. PMID:24277789

Demographic and health attributes of the Nahua, initial contact population of the Peruvian Amazon.

PubMed

Culqui, Dante R; Ayuso-Alvarez, Ana; Munayco, Cesar V; Quispe-Huaman, Carlos; Mayta-Tristán, Percy; Campos, Juan de Mata Donado

2016-01-01

We present the case of the Nahua population of Santa Rosa de Serjali, Peruvian Amazon's population, considered of initial contact. This population consists of human groups that for a long time decided to live in isolation, but lately have begun living a more sedentary lifestyle and in contact with Western populations. There are two fully identified initial contact groups in Peru: the Nahua and the Nanti. The health statistics of the Nahua are scarce. This study offers an interpretation of demographic and epidemiological indicators of the Nahua people, trying to identify if a certain degree of health vulnerability exists. We performed a cross sectional study, and after analyzing their health indicators, as well as the supplemental qualitative analysis of the population, brought us to conclude that in 2006, the Nahua, remained in a state of health vulnerability.

Insights from the genome of a high alkaline cellulase producing Aspergillus fumigatus strain obtained from Peruvian Amazon rainforest.

PubMed

Paul, Sujay; Zhang, Angel; Ludeña, Yvette; Villena, Gretty K; Yu, Fengan; Sherman, David H; Gutiérrez-Correa, Marcel

2017-06-10

Here, we report the complete genome sequence of a high alkaline cellulase producing Aspergillus fumigatus strain LMB-35Aa isolated from soil of Peruvian Amazon rainforest. The genome is ∼27.5mb in size, comprises of 228 scaffolds with an average GC content of 50%, and is predicted to contain a total of 8660 protein-coding genes. Of which, 6156 are with known function; it codes for 607 putative CAZymes families potentially involved in carbohydrate metabolism. Several important cellulose degrading genes, such as endoglucanase A, endoglucanase B, endoglucanase D and beta-glucosidase, are also identified. The genome of A. fumigatus strain LMB-35Aa represents the first whole sequenced genome of non-clinical, high cellulase producing A. fumigatus strain isolated from forest soil. Copyright © 2017 Elsevier B.V. All rights reserved.

Fasciola hepatica Infection in an Indigenous Community of the Peruvian Jungle.

PubMed

Cabada, Miguel M; Castellanos-Gonzalez, Alejandro; Lopez, Martha; Caravedo, María Alejandra; Arque, Eulogia; White, Arthur Clinton

2016-06-01

Fasciola hepatica is a zoonotic infection with a worldwide distribution. Autochthonous cases have not been reported in the Amazon region of Peru. Operculated eggs resembling F. hepatica were identified in the stools of five out of 215 subjects in a remote indigenous community of the Peruvian jungle. Polymerase chain reaction targeting Fasciola hepatica cytochrome oxidase subunit 1 (COI) gene and sequencing of the products confirmed Fasciola infection. © The American Society of Tropical Medicine and Hygiene.

Oil pollution in soils and sediments from the Northern Peruvian Amazon.

PubMed

Rosell-Melé, Antoni; Moraleda-Cibrián, Núria; Cartró-Sabaté, Mar; Colomer-Ventura, Ferran; Mayor, Pedro; Orta-Martínez, Martí

2018-01-01

Oil has been extracted from the Northern Peruvian Amazon for over four decades. However, few scientific studies have assessed the impacts of such activities in the environment and health of indigenous communities in the region. We have investigated the occurrence of petrogenic hydrocarbon pollution in soils and sediments from areas favoured as hunting or fishing grounds by local indigenous inhabitants. The study was conducted in one of the most productive oil blocks in Peru, located in the headwaters of the Amazon river. Soils and river sediments, in the vicinity of oil extraction and processing infrastructure, contained an oil pollution signature as attested by the occurrence of hopanes and steranes. Given the lack of any other significant source of oil pollution in the region, the sources of hydrocarbons are likely to be the activities of the oil industry in the oil block, from voluntary discharges or accidental spills. Spillage of produced water was commonplace until 2009. Moreover, petrogenic compounds were absent in control samples in sites far removed from any oil infrastructure in the oil block. Our findings suggest that wildlife and indigenous populations in this region of the Amazon are exposed to the ingestion of oil polluted soils and sediments. The data obtained supports previous claims that the local spillage of oil and produced waters in the water courses in the Corrientes and Pastaza basins could have eventually reached the main water course of the Amazon. Copyright © 2017 Elsevier B.V. All rights reserved.

Elevated rates of gold mining in the Amazon revealed through high-resolution monitoring.

PubMed

Asner, Gregory P; Llactayo, William; Tupayachi, Raul; Luna, Ernesto Ráez

2013-11-12

Gold mining has rapidly increased in western Amazonia, but the rates and ecological impacts of mining remain poorly known and potentially underestimated. We combined field surveys, airborne mapping, and high-resolution satellite imaging to assess road- and river-based gold mining in the Madre de Dios region of the Peruvian Amazon from 1999 to 2012. In this period, the geographic extent of gold mining increased 400%. The average annual rate of forest loss as a result of gold mining tripled in 2008 following the global economic recession, closely associated with increased gold prices. Small clandestine operations now comprise more than half of all gold mining activities throughout the region. These rates of gold mining are far higher than previous estimates that were based on traditional satellite mapping techniques. Our results prove that gold mining is growing more rapidly than previously thought, and that high-resolution monitoring approaches are required to accurately quantify human impacts on tropical forests.

Elevated rates of gold mining in the Amazon revealed through high-resolution monitoring

PubMed Central

Asner, Gregory P.; Llactayo, William; Tupayachi, Raul; Luna, Ernesto Ráez

2013-01-01

Gold mining has rapidly increased in western Amazonia, but the rates and ecological impacts of mining remain poorly known and potentially underestimated. We combined field surveys, airborne mapping, and high-resolution satellite imaging to assess road- and river-based gold mining in the Madre de Dios region of the Peruvian Amazon from 1999 to 2012. In this period, the geographic extent of gold mining increased 400%. The average annual rate of forest loss as a result of gold mining tripled in 2008 following the global economic recession, closely associated with increased gold prices. Small clandestine operations now comprise more than half of all gold mining activities throughout the region. These rates of gold mining are far higher than previous estimates that were based on traditional satellite mapping techniques. Our results prove that gold mining is growing more rapidly than previously thought, and that high-resolution monitoring approaches are required to accurately quantify human impacts on tropical forests. PMID:24167281

The DISAM Journal of International Security Assistance Management. Volume 23, Number 2, Winter 2001

DTIC Science & Technology

2001-01-01

humanitarian role as our forces remain ever prepared for their main task of seeing to the defense and security of our country. The DISAM Journal, Winter 2001...the international mine action community. During 2001, a survey will be conducted with customers of the site to ensure that our focus remains on the...preparation. The DISAM Journal, Winter 200137 United States and Peruvians treat a child on a Medrete in the Peruvian Amazon . Units must prepare for overseas

Detection of pathogenic Leptospira spp. infections among mammals captured in the Peruvian Amazon basin region.

PubMed

Bunnell, J E; Hice, C L; Watts, D M; Montrueil, V; Tesh, R B; Vinetz, J M

2000-01-01

To identify potential zoonotic reservoirs of pathogenic leptospires in the Peruvian Amazon basin, wild mammals were trapped from July 1997 to December 1998 near the city of Iquitos. After extraction of nucleic acids from animal kidneys, DNA of pathogenic leptospires was identified by polymerase chain reaction (PCR) assays using one of two primer sets, one amplifying a region of the 23S rRNA gene, and the other amplifying a gene fragment specific for Leptospira spp (G1/G2 primers). Overall, 29% (40 of 136) of the mammals tested showed evidence of renal infection by Leptospira spp., including 20% (13 of 64) of the rodents, 39% (20 of 51) of the marsupials, and 35% (7 of 20) of the chiropterans (bats). Marsupials and chiropterans were implicated as more significant reservoir hosts of leptospires pathogenic to humans than previously recognized.

Structural factors that increase HIV/STI vulnerability among indigenous people in the Peruvian amazon.

PubMed

Orellana, E Roberto; Alva, Isaac E; Cárcamo, Cesar P; García, Patricia J

2013-09-01

We examined structural factors-social, political, economic, and environmental-that increase vulnerability to HIV among indigenous people in the Peruvian Amazon. Indigenous adults belonging to 12 different ethnic groups were purposively recruited in four Amazonian river ports and 16 indigenous villages. Qualitative data revealed a complex set of structural factors that give rise to environments of risk where health is constantly challenged. Ferryboats that cross Amazonian rivers are settings where unprotected sex-including transactional sex between passengers and boat crew and commercial sex work-often take place. Population mobility and mixing also occurs in settings like the river docks, mining sites, and other resource extraction camps, where heavy drinking and unprotected sex work are common. Multilevel, combination prevention strategies that integrate empirically based interventions with indigenous knowledge are urgently needed, not only to reduce vulnerability to HIV transmission, but also to eliminate the structural determinants of indigenous people's health.

Structural Factors That Increase HIV/STI Vulnerability Among Indigenous People in the Peruvian Amazon

PubMed Central

Orellana, E. Roberto; Alva, Isaac E.; Cárcamo, Cesar P.; García, Patricia J.

2015-01-01

We examined structural factors—social, political, economic, and environmental—that increase vulnerability to HIV among indigenous people in the Peruvian Amazon. Indigenous adults belonging to 12 different ethnic groups were purposively recruited in four Amazonian river ports and 16 indigenous villages. Qualitative data revealed a complex set of structural factors that give rise to environments of risk where health is constantly challenged. Ferryboats that cross Amazonian rivers are settings where unprotected sex—including transactional sex between passengers and boat crew and commercial sex work—often take place. Population mobility and mixing also occurs in settings like the river docks, mining sites, and other resource extraction camps, where heavy drinking and unprotected sex work are common. Multilevel, combination prevention strategies that integrate empirically based interventions with indigenous knowledge are urgently needed, not only to reduce vulnerability to HIV transmission, but also to eliminate the structural determinants of indigenous people’s health. PMID:23925407

Accelerating to Zero: Strategies to Eliminate Malaria in the Peruvian Amazon

PubMed Central

Quispe, Antonio M.; Llanos-Cuentas, Alejandro; Rodriguez, Hugo; Clendenes, Martin; Cabezas, Cesar; Leon, Luis M.; Chuquiyauri, Raul; Moreno, Marta; Kaslow, David C.; Grogl, Max; Herrera, Sócrates; Magill, Alan J.; Kosek, Margaret; Vinetz, Joseph M.; Lescano, Andres G.; Gotuzzo, Eduardo

2016-01-01

In February 2014, the Malaria Elimination Working Group, in partnership with the Peruvian Ministry of Health (MoH), hosted its first international conference on malaria elimination in Iquitos, Peru. The 2-day meeting gathered 85 malaria experts, including 18 international panelists, 23 stakeholders from different malaria-endemic regions of Peru, and 11 MoH authorities. The main outcome was consensus that implementing a malaria elimination project in the Amazon region is achievable, but would require: 1) a comprehensive strategic plan, 2) the altering of current programmatic guidelines from control toward elimination by including symptomatic as well as asymptomatic individuals for antimalarial therapy and transmission-blocking interventions, and 3) the prioritization of community-based active case detection with proper rapid diagnostic tests to interrupt transmission. Elimination efforts must involve key stakeholders and experts at every level of government and include integrated research activities to evaluate, implement, and tailor sustainable interventions appropriate to the region.

Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp: implications for South American prehistory.

PubMed

Scliar, Marilia O; Gouveia, Mateus H; Benazzo, Andrea; Ghirotto, Silvia; Fagundes, Nelson J R; Leal, Thiago P; Magalhães, Wagner C S; Pereira, Latife; Rodrigues, Maira R; Soares-Souza, Giordano B; Cabrera, Lilia; Berg, Douglas E; Gilman, Robert H; Bertorelle, Giorgio; Tarazona-Santos, Eduardo

2014-09-30

Archaeology reports millenary cultural contacts between Peruvian Coast-Andes and the Amazon Yunga, a rainforest transitional region between Andes and Lower Amazonia. To clarify the relationships between cultural and biological evolution of these populations, in particular between Amazon Yungas and Andeans, we used DNA-sequence data, a model-based Bayesian approach and several statistical validations to infer a set of demographic parameters. We found that the genetic diversity of the Shimaa (an Amazon Yunga population) is a subset of that of Quechuas from Central-Andes. Using the Isolation-with-Migration population genetics model, we inferred that the Shimaa ancestors were a small subgroup that split less than 5300 years ago (after the development of complex societies) from an ancestral Andean population. After the split, the most plausible scenario compatible with our results is that the ancestors of Shimaas moved toward the Peruvian Amazon Yunga and incorporated the culture and language of some of their neighbors, but not a substantial amount of their genes. We validated our results using Approximate Bayesian Computations, posterior predictive tests and the analysis of pseudo-observed datasets. We presented a case study in which model-based Bayesian approaches, combined with necessary statistical validations, shed light into the prehistoric demographic relationship between Andeans and a population from the Amazon Yunga. Our results offer a testable model for the peopling of this large transitional environmental region between the Andes and the Lower Amazonia. However, studies on larger samples and involving more populations of these regions are necessary to confirm if the predominant Andean biological origin of the Shimaas is the rule, and not the exception.

Acceptability of a herd immunity-focused, transmission-blocking malaria vaccine in malaria-endemic communities in the Peruvian Amazon: an exploratory study.

PubMed

White, Sara E; Harvey, Steven A; Meza, Graciela; Llanos, Alejandro; Guzman, Mitchel; Gamboa, Dionicia; Vinetz, Joseph M

2018-04-27

A transmission-blocking vaccine (TBV) to prevent malaria-infected humans from infecting mosquitoes has been increasingly considered as a tool for malaria control and elimination. This study tested the hypothesis that a malaria TBV would be acceptable among residents of a malaria-hypoendemic region. The study was carried out in six Spanish-speaking rural villages in the Department of Loreto in the Peruvian Amazon. These villages comprise a cohort of 430 households associated with the Peru-Brazil International Centre for Excellence in Malaria Research. Individuals from one-third (143) of enrolled households in an ongoing longitudinal, prospective cohort study in 6 communities in Loreto, Peru, were randomly selected to participate by answering a pre-validated questionnaire. All 143 participants expressed desire for a malaria vaccine in general; only 1 (0.7%) expressed unwillingness to receive a transmission-blocking malaria vaccine. Injection was considered most acceptable for adults (97.2%); for children drops in the mouth were preferred (96.8%). Acceptability waned marginally with the prospect of multiple injections (83.8%) and different projected efficacies at 70 and 50% (90.1 and 71.8%, respectively). Respondents demonstrated clear understanding that the vaccine was for community, rather than personal, protection against malaria infection. In this setting of the Peruvian Amazon, a transmission-blocking malaria vaccine was found to be almost universally acceptable. This study is the first to report that residents of a malaria-endemic region have been queried regarding a malaria vaccine strategy that policy-makers in the industrialized world often dismiss as altruistic.

Genetic Diversity and Structure of Managed and Semi-natural Populations of Cocoa (Theobroma cacao) in the Huallaga and Ucayali Valleys of Peru

PubMed Central

ZHANG, DAPENG; AREVALO-GARDINI, ENRIQUE; MISCHKE, SUE; ZÚÑIGA-CERNADES, LUIS; BARRETO-CHAVEZ, ALEJANDRO; AGUILA, JORGE ADRIAZOLA DEL

2006-01-01

• Background and Aims Cocoa (Theobroma cacao) is indigenous to the Amazon region of South America, and it is well known that the Peruvian Amazon harbours a large number of diverse cocoa populations. A small fraction of the diversity has been collected and maintained as an ex-situ germplasm repository in Peru. However, incorrect labelling of accessions and lack of information on genetic diversity have hindered efficient conservation and use of this germplasm. This study targeted assessment of genetic diversity and population structure in a managed and a semi-natural population. •Methods Using a capillary electrophoresis genotyping system, 105 cocoa accessions collected from the Huallaga and Ucayali valleys of Peru were fingerprinted. Based on 15 loci SSR profiles, genetic identity was examined for each accession and duplicates identified, population structure assessed and genetic diversity analysed in these two populations. •Key Results Ten synonymous mislabelled groups were identified among the 105 accessions. The germplasm group in the Huallaga valley was clearly separated from the group in Ucayali valley by the Bayesian assignment test. The Huallaga group has lower genetic diversity, both in terms of allelic richness and of gene diversity, than the Ucayali group. Analysis of molecular variance suggested genetic substructure in the Ucayali group. Significant spatial correlation between genetic distance and geographical distances was detected in the Ucayali group by Mantel tests. •Conclusions These results substantiate the hypothesis that the Peruvian Amazon hosts a high level of cocoa genetic diversity, and the diversity has a spatial structure. The introduction of exotic seed populations into the Peruvian Amazon is changing the cocoa germplasm spectrum in this region. The spatial structure of cocoa diversity recorded here highlights the need for additional collecting and conservation measures for natural and semi-natural cocoa populations. PMID:16845139

The dilemma of contact: voluntary isolation and the impacts of gas exploitation on health and rights in the Kugapakori Nahua Reserve, Peruvian Amazon

NASA Astrophysics Data System (ADS)

Napolitano, Dora A.; Ryan, Aliya S. S.

2007-10-01

Many small groups of indigenous peoples in the Amazon basin avoid and resist direct encounters with outsiders. As far as we know, they do so because of appalling experiences in earlier encounters with national society. When contacted today, they are extremely vulnerable to introduced diseases and exploitation. In this paper we draw on our experience in the Kugapakori Nahua Reserve for isolated peoples in SE Peru to discuss some of the current debates about whether isolated peoples should be contacted and how best to respect their right to life, health, autonomy and territory. The remote headwater regions where isolated peoples sought refuge during the last century are increasingly sought after for resource extraction. In particular, the extraction of oil and gas is increasing throughout the Peruvian Amazon. In the second part of the paper we give some examples of how oil/gas companies and the energy sector in Peru have affected the well-being of the peoples in this reserve in the 21st century. If this trend is not reversed the impacts for isolated peoples will be irreparable.

Outbreak of Cutaneous Leishmaniasis in Peruvian Military Personnel Undertaking Training Activities in the Amazon Basin, 2010

PubMed Central

Oré, Marianela; Sáenz, Eliana; Cabrera, Rufino; Sanchez, Juan F.; De Los Santos, Maxy B.; Lucas, Carmen M.; Núñez, Jorge H.; Edgel, Kimberly A.; Sopan, Justino; Fernández, Jorge; Carnero, Andres M.; Baldeviano, G. Christian; Arrasco, Juan C.; Graf, Paul C. F.; Lescano, Andres G.

2015-01-01

Military personnel deployed to the Amazon Basin are at high risk for cutaneous leishmaniasis (CL). We responded to an outbreak among Peruvian Army personnel returning from short-term training in the Amazon, conducting active case detection, lesion sample collection, and risk factor assessment. The attack rate was 25% (76/303); the incubation period was 2–36 weeks (median = 8). Most cases had one lesion (66%), primarily ulcerative (49%), and in the legs (57%). Real-time polymerase chain reaction (PCR) identified Leishmania (Viannia) braziliensis (59/61 = 97%) and L. (V.) guyanensis (2/61 = 3%). Being male (risk ratio [RR] = 4.01; P = 0.034), not wearing long-sleeve clothes (RR = 1.71; P = 0.005), and sleeping in open rooms (RR = 1.80; P = 0.009) were associated with CL. Sodium stibogluconate therapy had a 41% cure rate, less than previously reported in Peru (∼ 70%; P < 0.001). After emphasizing pre-deployment education and other basic prevention measures, trainees in the following year had lower incidence (1/278 = 0.4%; P < 0.001). Basic prevention can reduce CL risk in deployed militaries. PMID:26078320

Genome-Level Determination of Plasmodium falciparum Blood-Stage Targets of Malarial Clinical Immunity in the Peruvian Amazon

PubMed Central

Torres, Katherine J.; Castrillon, Carlos E.; Moss, Eli L.; Saito, Mayuko; Tenorio, Roy; Molina, Douglas M.; Davies, Huw; Neafsey, Daniel E.; Felgner, Philip; Vinetz, Joseph M.; Gamboa, Dionicia

2015-01-01

Background. Persons with blood-stage Plasmodium falciparum parasitemia in the absence of symptoms are considered to be clinically immune. We hypothesized that asymptomatic subjects with P. falciparum parasitemia would differentially recognize a subset of P. falciparum proteins on a genomic scale. Methods and Findings. Compared with symptomatic subjects, sera from clinically immune, asymptomatically infected individuals differentially recognized 51 P. falciparum proteins, including the established vaccine candidate PfMSP1. Novel, hitherto unstudied hypothetical proteins and other proteins not previously recognized as potential vaccine candidates were also differentially recognized. Genes encoding the proteins differentially recognized by the Peruvian clinically immune individuals exhibited a significant enrichment of nonsynonymous nucleotide variation, an observation consistent with these genes undergoing immune selection. Conclusions. A limited set of P. falciparum protein antigens was associated with the development of naturally acquired clinical immunity in the low-transmission setting of the Peruvian Amazon. These results imply that, even in a low-transmission setting, an asexual blood-stage vaccine designed to reduce clinical malaria symptoms will likely need to contain large numbers of often-polymorphic proteins, a finding at odds with many current efforts in the design of vaccines against asexual blood-stage P. falciparum. PMID:25381370

Human leptospirosis caused by a new, antigenically unique Leptospira associated with a Rattus species reservoir in the Peruvian Amazon.

PubMed

Matthias, Michael A; Ricaldi, Jessica N; Cespedes, Manuel; Diaz, M Monica; Galloway, Renee L; Saito, Mayuko; Steigerwalt, Arnold G; Patra, Kailash P; Ore, Carlos Vidal; Gotuzzo, Eduardo; Gilman, Robert H; Levett, Paul N; Vinetz, Joseph M

2008-04-02

As part of a prospective study of leptospirosis and biodiversity of Leptospira in the Peruvian Amazon, a new Leptospira species was isolated from humans with acute febrile illness. Field trapping identified this leptospire in peridomestic rats (Rattus norvegicus, six isolates; R. rattus, two isolates) obtained in urban, peri-urban, and rural areas of the Iquitos region. Novelty of this species was proven by serological typing, 16S ribosomal RNA gene sequencing, pulsed-field gel electrophoresis, and DNA-DNA hybridization analysis. We have named this species "Leptospira licerasiae" serovar Varillal, and have determined that it is phylogenetically related to, but genetically distinct from, other intermediate Leptospira such as L. fainei and L. inadai. The type strain is serovar Varillal strain VAR 010(T), which has been deposited into internationally accessible culture collections. By microscopic agglutination test, "Leptospira licerasiae" serovar Varillal was antigenically distinct from all known serogroups of Leptospira except for low level cross-reaction with rabbit anti-L. fainei serovar Hurstbridge at a titer of 1:100. LipL32, although not detectable by PCR, was detectable in "Leptospira licerasiae" serovar Varillal by both Southern blot hybridization and Western immunoblot, although on immunoblot, the predicted protein was significantly smaller (27 kDa) than that of L. interrogans and L. kirschneri (32 kDa). Isolation was rare from humans (2/45 Leptospira isolates from 881 febrile patients sampled), but high titers of MAT antibodies against "Leptospira licerasiae" serovar Varillal were common (30%) among patients fulfilling serological criteria for acute leptospirosis in the Iquitos region, and uncommon (7%) elsewhere in Peru. This new leptospiral species reflects Amazonian biodiversity and has evolved to become an important cause of leptospirosis in the Peruvian Amazon.

Human Leptospirosis Caused by a New, Antigenically Unique Leptospira Associated with a Rattus Species Reservoir in the Peruvian Amazon

PubMed Central

Cespedes, Manuel; Diaz, M. Monica; Galloway, Renee L.; Saito, Mayuko; Steigerwalt, Arnold G.; Patra, Kailash P.; Ore, Carlos Vidal; Gotuzzo, Eduardo; Gilman, Robert H.; Levett, Paul N.; Vinetz, Joseph M.

2008-01-01

As part of a prospective study of leptospirosis and biodiversity of Leptospira in the Peruvian Amazon, a new Leptospira species was isolated from humans with acute febrile illness. Field trapping identified this leptospire in peridomestic rats (Rattus norvegicus, six isolates; R. rattus, two isolates) obtained in urban, peri-urban, and rural areas of the Iquitos region. Novelty of this species was proven by serological typing, 16S ribosomal RNA gene sequencing, pulsed-field gel electrophoresis, and DNA-DNA hybridization analysis. We have named this species “Leptospira licerasiae” serovar Varillal, and have determined that it is phylogenetically related to, but genetically distinct from, other intermediate Leptospira such as L. fainei and L. inadai. The type strain is serovar Varillal strain VAR 010T, which has been deposited into internationally accessible culture collections. By microscopic agglutination test, “Leptospira licerasiae” serovar Varillal was antigenically distinct from all known serogroups of Leptospira except for low level cross-reaction with rabbit anti–L. fainei serovar Hurstbridge at a titer of 1∶100. LipL32, although not detectable by PCR, was detectable in “Leptospira licerasiae” serovar Varillal by both Southern blot hybridization and Western immunoblot, although on immunoblot, the predicted protein was significantly smaller (27 kDa) than that of L. interrogans and L. kirschneri (32 kDa). Isolation was rare from humans (2/45 Leptospira isolates from 881 febrile patients sampled), but high titers of MAT antibodies against “Leptospira licerasiae” serovar Varillal were common (30%) among patients fulfilling serological criteria for acute leptospirosis in the Iquitos region, and uncommon (7%) elsewhere in Peru. This new leptospiral species reflects Amazonian biodiversity and has evolved to become an important cause of leptospirosis in the Peruvian Amazon. PMID:18382606

[Cost-effectiveness ratio of using rapid tests for malaria diagnosis in the Peruvian Amazon].

PubMed

Rosas Aguirre, Angel Martín; Llanos Zavalaga, Luis Fernando; Trelles de Belaunde, Miguel

2009-05-01

To determine the cost-effectiveness ratios of three options for diagnosing malaria at the local health provider in 50 communities near the Peruvian Amazon. Calculation of the incremental cost-effectiveness ratios of three options for diagnosing malaria-not using rapid tests, using rapid tests, and accessing microscopy-in patients presenting with fever in 50 communities near Iquitos in the Peruvian Amazon, communities with limited access to microscopy that depend on a network of local health providers. The incremental costs and effects of the two latter options were calculated and compared with the first option (currently in use). By dividing the incremental costs among the incremental effects, the incremental cost-effectiveness ratio was calculated. Using rapid tests would save the Ministry of Health of Peru: US$191 for each new case of Plasmodium falciparum malaria treated promptly and appropriately; US$31 per new case of P. vivax malaria treated promptly and appropriately; US$1,051 per case of acute malaria averted; and US$17,655 for each death avoided. Access to microscopy by all the communities would generate an additional cost of: US$198 per new case of P. falciparum malaria treated promptly and appropriately; US$31 per new case of P. vivax malaria treated promptly and appropriately; US$1,086 per case of acute malaria averted; and US$18,255 for each death avoided. The use of rapid tests by local health providers can improve the effectiveness of malaria diagnosis in patients with fever in the 50 communities studied, at a cost lower than the current method. The recommendation is to expand the use of rapid tests among the health providers in communities similar to those studied.

From drought to flooding: understanding the abrupt 2010-11 hydrological annual cycle in the Amazonas River and tributaries

NASA Astrophysics Data System (ADS)

Carlo Espinoza, Jhan; Ronchail, Josyane; Loup Guyot, Jean; Junquas, Clementine; Drapeau, Guillaume; Martinez, Jean Michel; Santini, William; Vauchel, Philippe; Lavado, Waldo; Ordoñez, Julio; Espinoza, Raúl

2012-06-01

In this work we document and analyze the hydrological annual cycles characterized by a rapid transition between low and high flows in the Amazonas River (Peruvian Amazon) and we show how these events, which may impact vulnerable riverside residents, are related to regional climate variability. Our analysis is based on comprehensive discharge, rainfall and average suspended sediment data sets. Particular attention is paid to the 2010-11 hydrological year, when an unprecedented abrupt transition from the extreme September 2010 drought (8300 m3 s-1) to one of the four highest discharges in April 2011 (49 500 m3 s-1) was recorded at Tamshiyacu (Amazonas River). This unusual transition is also observed in average suspended sediments. Years with a rapid increase in discharge are characterized by negative sea surface temperature anomalies in the central equatorial Pacific during austral summer, corresponding to a La Niña-like mode. It originates a geopotential height wave train over the subtropical South Pacific and southeastern South America, with a negative anomaly along the southern Amazon and the southeastern South Atlantic convergence zone region. As a consequence, the monsoon flux is retained over the Amazon and a strong convergence of humidity occurs in the Peruvian Amazon basin, favoring high rainfall and discharge. These features are also reported during the 2010-11 austral summer, when an intense La Niña event characterized the equatorial Pacific.

Needs, Acceptability, and Value of Humanitarian Medical Assistance in Remote Peruvian Amazon Riverine Communities

PubMed Central

Sanchez, Juan F.; Halsey, Eric S.; Bayer, Angela M.; Beltran, Martin; Razuri, Hugo R.; Velasquez, Daniel E.; Cama, Vitaliano A.; Graf, Paul C. F.; Quispe, Antonio M.; Maves, Ryan C.; Montgomery, Joel M.; Sanders, John W.; Lescano, Andres G.

2015-01-01

Much debate exists regarding the need, acceptability, and value of humanitarian medical assistance. We conducted a cross-sectional study on 457 children under 5 years from four remote riverine communities in the Peruvian Amazon and collected anthropometric measures, blood samples (1–4 years), and stool samples. Focus groups and key informant interviews assessed perspectives regarding medical aid delivered by foreigners. The prevalence of stunting, anemia, and intestinal parasites was 20%, 37%, and 62%, respectively. Infection with multiple parasites, usually geohelminths, was detected in 41% of children. The prevalence of intestinal parasites both individual and polyparasitism increased with age. Participants from smaller communities less exposed to foreigners expressed lack of trust and fear of them. However, participants from all communities were positive about foreigners visiting to provide health support. Prevalent health needs such as parasitic infections and anemia may be addressed by short-term medical interventions. There is a perceived openness to and acceptability of medical assistance delivered by foreign personnel. PMID:25846293

Factors Associated with Delayed Tuberculosis Test-seeking Behavior in the Peruvian Amazon

PubMed Central

Ford, Carolyn M.; Bayer, Angela M.; Gilman, Robert H.; Onifade, Dami; Acosta, Colleen; Cabrera, Lilia; Vidal, Carlos; Evans, Carlton A.

2010-01-01

This study aimed to determine the psychosocial factors associated with delayed test-seeking among tuberculosis patients. The duration of symptoms before seeking medical care was assessed by interview for 108 newly diagnosed pulmonary tuberculosis patients in the city of Iquitos in the Peruvian Amazon, which has high tuberculosis incidence. Beliefs associated with test-seeking behavior and delay was assessed in these patients. The median delay from symptom onset to seeking diagnostic testing was 61 days (inter-quartile range 30–91 days). The belief that tuberculosis is curable was associated with a 100% longer test-seeking delay; the perception that tuberculosis was common was associated with a 57% longer delay; male gender was associated with a 48% longer delay; and education less than complete secondary schooling was associated with a 44% longer delay. In conclusion, current health promotion activities that emphasize tuberculosis curability and high prevalence may paradoxically increase test-seeking delay and therefore require prospective evaluation. PMID:19996443

Titling indigenous communities protects forests in the Peruvian Amazon.

PubMed

Blackman, Allen; Corral, Leonardo; Lima, Eirivelthon Santos; Asner, Gregory P

2017-04-18

Developing countries are increasingly decentralizing forest governance by granting indigenous groups and other local communities formal legal title to land. However, the effects of titling on forest cover are unclear. Rigorous analyses of titling campaigns are rare, and related theoretical and empirical research suggests that they could either stem or spur forest damage. We analyze such a campaign in the Peruvian Amazon, where more than 1,200 indigenous communities comprising some 11 million ha have been titled since the mid-1970s. We use community-level longitudinal data derived from high-resolution satellite images to estimate the effect of titling between 2002 and 2005 on contemporaneous forest clearing and disturbance. Our results indicate that titling reduces clearing by more than three-quarters and forest disturbance by roughly two-thirds in a 2-y window spanning the year title is awarded and the year afterward. These results suggest that awarding formal land titles to local communities can advance forest conservation.

Titling indigenous communities protects forests in the Peruvian Amazon

PubMed Central

Blackman, Allen; Corral, Leonardo; Lima, Eirivelthon Santos; Asner, Gregory P.

2017-01-01

Developing countries are increasingly decentralizing forest governance by granting indigenous groups and other local communities formal legal title to land. However, the effects of titling on forest cover are unclear. Rigorous analyses of titling campaigns are rare, and related theoretical and empirical research suggests that they could either stem or spur forest damage. We analyze such a campaign in the Peruvian Amazon, where more than 1,200 indigenous communities comprising some 11 million ha have been titled since the mid-1970s. We use community-level longitudinal data derived from high-resolution satellite images to estimate the effect of titling between 2002 and 2005 on contemporaneous forest clearing and disturbance. Our results indicate that titling reduces clearing by more than three-quarters and forest disturbance by roughly two-thirds in a 2-y window spanning the year title is awarded and the year afterward. These results suggest that awarding formal land titles to local communities can advance forest conservation. PMID:28373565

Expansion of HIV and syphilis into the Peruvian Amazon: a survey of four communities of an indigenous Amazonian ethnic group

PubMed Central

Bartlett, Ellika C.; Zavaleta, Carol; Fernández, Connie; Razuri, Hugo; Vilcarromero, Stalin; Vermund, Sten H.; Gotuzzo, Eduardo

2008-01-01

Summary Background In 2004, cases of HIV and syphilis were reported in an indigenous community in the Peruvian Amazon. This study sought to determine the prevalence of HIV and syphilis in four remote communities of the same indigenous ethnic group located further from an urban center than the original community, and to identify risk factors for HIV and syphilis transmission. Methods Rapid and confirmatory tests for HIV and syphilis were performed. A questionnaire elicited demographic information, risk factors for sexually transmitted infections, and knowledge/beliefs about HIV/AIDS. Results We collected 282 blood samples and conducted interviews with 281 (99.6%) participants. The confirmed syphilis prevalence rate was 3.2% (9/282; 3.7% (5/135) for men and 2.7% (4/147) for women). The confirmed HIV prevalence rate was 0.7% (2/282), with both infections in men who had sex with men (MSM). Self-reported MSM activity was 39.7%. There was poor knowledge about HIV infection, transmission, and prevention, and low acceptance of known prevention methods. Conclusions HIV and syphilis are now prevalent in remote Amazonian communities of an indigenous group in Peru. Expansion of the HIV epidemic into the Amazon requires an urgent public health response. PMID:18760648

A new genus of katydid from the Amazon Rainforest (Orthoptera: Tettigoniidae; Phaneropterinae; Steirodontini): Ninth contribution to the suprageneric organization of the Neotropical phaneropterines.

PubMed

Cadena-Castañeda, Oscar J; Mendes, Diego Matheus De Mello; Alves-Oliveira, João Rafael

2016-08-15

Emsleyfolium diasae n. gen. et n. sp., from the Brazilian, Colombian, Ecuadorian and Peruvian Amazon is described in this contribution. This new genus is morphologically very similar to Stilpnochlora, but is distinguished from the other Steirodiontini genera by its cone-head (similar to some genera of subfamily Conocephalinae, e.g. Neoconocephalus and Bucrates), modification of the tenth tergite into three lobes and absence of styles on subgenital plate. Thanatosis behavior is described as a defense mechanism.

High prevalence of very-low Plasmodium falciparum and Plasmodium vivax parasitaemia carriers in the Peruvian Amazon: insights into local and occupational mobility-related transmission.

PubMed

Carrasco-Escobar, Gabriel; Miranda-Alban, Julio; Fernandez-Miñope, Carlos; Brouwer, Kimberly C; Torres, Katherine; Calderon, Maritza; Gamboa, Dionicia; Llanos-Cuentas, Alejandro; Vinetz, Joseph M

2017-10-16

The incidence of malaria due both to Plasmodium falciparum and Plasmodium vivax in the Peruvian Amazon has risen in the past 5 years. This study tested the hypothesis that the maintenance and emergence of malaria in hypoendemic regions such as Amazonia is determined by submicroscopic and asymptomatic Plasmodium parasitaemia carriers. The present study aimed to precisely quantify the rate of very-low parasitaemia carriers in two sites of the Peruvian Amazon in relation to transmission patterns of P. vivax and P. falciparum in this area. This study was carried out within the Amazonian-ICEMR longitudinal cohort. Blood samples were collected for light microscopy diagnosis and packed red blood cell (PRBC) samples were analysed by qPCR. Plasma samples were tested for total IgG reactivity against recombinant PvMSP-10 and PfMSP-10 antigens by ELISA. Occupation and age 10 years and greater were considered surrogates of occupation-related mobility. Risk factors for P. falciparum and P. vivax infections detected by PRBC-qPCR were assessed by multilevel logistic regression models. Among 450 subjects, the prevalence of P. vivax by PRBC-PCR (25.1%) was sixfold higher than that determined by microscopy (3.6%). The prevalence of P. falciparum infection was 4.9% by PRBC-PCR and 0.2% by microscopy. More than 40% of infections had parasitaemia under 5 parasites/μL. Multivariate analysis for infections detected by PRBC-PCR showed that participants with recent settlement in the study area (AOR 2.1; 95% CI 1.03:4.2), age ≥ 30 years (AOR 3.3; 95% CI 1.6:6.9) and seropositivity to P. vivax (AOR 1.8; 95% CI 1.0:3.2) had significantly higher likelihood of P. vivax infection, while the odds of P. falciparum infection was higher for participants between 10 and 29 years (AOR 10.7; 95% CI 1.3:91.1) and with a previous P. falciparum infection (AOR 10.4; 95% CI 1.5:71.1). This study confirms the contrasting transmission patterns of P. vivax and P. falciparum in the Peruvian Amazon, with stable local transmission for P. vivax and the source of P. falciparum to the study villages dominated by very low parasitaemia carriers, age 10 years and older, who had travelled away from home for work and brought P. falciparum infection with them.

Hepatitis B virus, syphilis, and HIV seroprevalence in pregnant women and their male partners from six indigenous populations of the Peruvian Amazon Basin, 2007-2008.

PubMed

Ormaeche, Melvy; Whittembury, Alvaro; Pun, Mónica; Suárez-Ognio, Luis

2012-10-01

To assess the seroprevalence of hepatitis B virus (HBV), syphilis, and HIV and associated risk factors in pregnant women and their male partners from six indigenous populations of the Peruvian Amazon Basin. A cross-sectional study was performed in six indigenous populations from the Peruvian Amazon Basin. Blood samples were obtained and tested for HBV (antibodies to the hepatitis B core antigen (anti-HBc) and hepatitis B surface antigen (HBsAg)), for syphilis (rapid plasma reagin and microhemagglutination assay for Treponema pallidum antibodies), and for HIV (ELISA and indirect immunofluorescence test). A survey was also performed to identify associated risk factors. One thousand two hundred and fifty-one pregnant women and 778 male partners were enrolled in the study. The seroprevalence of anti-HBc in pregnant women was 42.06% (95% confidence interval (CI) 39.28-44.85%) and in their male partners was 54.09% (95% CI 50.32-57.86%). The seroprevalence of HBsAg in pregnant women was 2.11% (95% CI 0.78-3.44%) and in their male partners was 3.98% (95% CI 1.87-6.08%). The seroprevalence of syphilis in pregnant women was 1.60% (95% CI 0.86-2.33%) and in their male partners was 2.44% (95% CI 1.22-3.66%). HIV seroprevalence in pregnant women was 0.16% (95% CI 0.02-0.58%) and in their male partners was 0.29% (95% CI 0.04-1.03%). Sexual risk factors were strongly related to blood markers of syphilis and HBV. Hepatitis B was found to be hyperendemic and strongly related to sexual factors, suggesting an important sexual component in the transmission of the disease in the populations studied. Syphilis was found to have an endemicity in pregnant women above the national level and this may be indicative of high mother-to-child transmission. HIV has started to show its presence in indigenous populations of the Amazon Basin and the results suggest the epidemic is concentrated. Copyright © 2012 International Society for Infectious Diseases. Published by Elsevier Ltd. All rights reserved.

Genome-level determination of Plasmodium falciparum blood-stage targets of malarial clinical immunity in the Peruvian Amazon.

PubMed

Torres, Katherine J; Castrillon, Carlos E; Moss, Eli L; Saito, Mayuko; Tenorio, Roy; Molina, Douglas M; Davies, Huw; Neafsey, Daniel E; Felgner, Philip; Vinetz, Joseph M; Gamboa, Dionicia

2015-04-15

Persons with blood-stage Plasmodium falciparum parasitemia in the absence of symptoms are considered to be clinically immune. We hypothesized that asymptomatic subjects with P. falciparum parasitemia would differentially recognize a subset of P. falciparum proteins on a genomic scale. Compared with symptomatic subjects, sera from clinically immune, asymptomatically infected individuals differentially recognized 51 P. falciparum proteins, including the established vaccine candidate PfMSP1. Novel, hitherto unstudied hypothetical proteins and other proteins not previously recognized as potential vaccine candidates were also differentially recognized. Genes encoding the proteins differentially recognized by the Peruvian clinically immune individuals exhibited a significant enrichment of nonsynonymous nucleotide variation, an observation consistent with these genes undergoing immune selection. A limited set of P. falciparum protein antigens was associated with the development of naturally acquired clinical immunity in the low-transmission setting of the Peruvian Amazon. These results imply that, even in a low-transmission setting, an asexual blood-stage vaccine designed to reduce clinical malaria symptoms will likely need to contain large numbers of often-polymorphic proteins, a finding at odds with many current efforts in the design of vaccines against asexual blood-stage P. falciparum. © The Author 2014. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Toxoplasma gondii antibodies in wild white-lipped peccary (Tayassu pecari) from Peru

USDA-ARS?s Scientific Manuscript database

In the Peruvian Amazon, the white-lipped peccary (Tayassu pecari) is a desirable game and is important for local rural economy. Blood samples from 101 white-lipped peccary from Peru were collected from 3 different conservation areas located in the municipalities of Manu and Tambopata, southeastern r...

Naphthalene, an insect repellent, is produced by Muscodor vitigenus, a novel endophytic fungus

Treesearch

Bryn H. Daisy; Gary A. Strobel; Uvidelio Castillo; David Ezra; Joe Sears; David K. Weaver; Justin B. Runyon

2002-01-01

Muscodor vitigenus is a recently described endophytic fungus of Paullinia paullinioides, a liana growing in the understorey of the rainforests of the Peruvian Amazon. This fungus produces naphthalene under certain cultural conditions. Naphthalene produced by M. vitigenus was identified by gas chromatography/mass...

Rare models: Roger Casement, the Amazon, and the ethnographic picturesque.

PubMed

Wylie, Lesley

2010-01-01

In 1910 Roger Casement was sent by the British government to investigate the alleged humanitarian abuses of the Peruvian Amazon Company in the Putumayo, a disputed border zone in North West Amazonia. Casement brought more than verbal and written testimony back to London. On 26 June, some six months after he returned from the Amazon, Casement collected two Amerindian boys - Omarino and Ricudo - from Southampton docks. This paper will reconstruct the brief period that these young men spent in Britain in the summer of 1911 and assess, in particular, to what extent they were treated as 'exhibits' by Casement, who not only introduced them to leading members of the British establishment but also arranged for them to be painted and photographed following contemporary ethnographic conventions.

Ecuadorean-Peruvian Rivalry in the Upper Amazon,

DTIC Science & Technology

1978-01-01

8217 y el Ecuador. Documentos anexos a la Memoria del Per. Madrid, 1903. Vol. III, Document 86- p. 216 ff. 2. Jorge W. Villacres Moscoso, Historia...AMISTAD Y LIMITES ENTRE PERU Y ECUADOR Los Gobiernos del Peru’ y del Ecuador, deseando dar solucior. a la cuestic~n de Ifmites que por largo tiempo los

Use of filter papers to determine seroprevalence of Toxoplasma gondii among hunted ungulates

USDA-ARS?s Scientific Manuscript database

Toxoplasmosis is a zoonosis caused by the protozoan Toxoplasma gondii, and it is found worldwide. To determine whether ungulates are reservoirs of T. gondii in an isolated and remote region of the northeastern Peruvian Amazon, antibodies to T. gondii were determined in 5 species of ungulates by the...

We need to "ikarar the kutipados": intercultural understanding and health care in the Peruvian Amazon.

PubMed

Yajahuanca, Rosário Avellaneda; Diniz, Carmen Simone Grilo; Cabral, Cristiane da Silva

2015-09-01

The scope of this qualitative research was to describe and analyze how the Kukamas Kukamirias indigenous population from the Peruvian Amazon perceives and evaluates the healthcare offered by health workers at the local San Regis health post. An ethnographic-based study was conducted among the San Regis community on the Marañon River in the Loreto district of Peru, including interviews and participative observations with female and male patients as well as with traditional healers and professional health workers. An intercultural perspective is adopted to discuss the evaluations made by the Kukamas Kukamirias about the healthcare offered by professionals at their local health post. Issues examined include the intercultural matches and mismatches that affect vulnerable groups of the population in their interactions with the health services. The frequent preference shown for traditional treatment implies a close relationship between the healer and the person who is sick. This means that conventional forms of healthcare should be seen from an intercultural perspective and taken into account when organizing and articulating health services.

The peopling of South America and the trans-Andean gene flow of the first settlers.

PubMed

Gómez-Carballa, Alberto; Pardo-Seco, Jacobo; Brandini, Stefania; Achilli, Alessandro; Perego, Ugo A; Coble, Michael D; Diegoli, Toni M; Álvarez-Iglesias, Vanesa; Martinón-Torres, Federico; Olivieri, Anna; Torroni, Antonio; Salas, Antonio

2018-06-01

Genetic and archaeological data indicate that the initial Paleoindian settlers of South America followed two entry routes separated by the Andes and the Amazon rainforest. The interactions between these paths and their impact on the peopling of South America remain unclear. Analysis of genetic variation in the Peruvian Andes and regions located south of the Amazon River might provide clues on this issue. We analyzed mitochondrial DNA variation at different Andean locations and >360,000 autosomal SNPs from 28 Native American ethnic groups to evaluate different trans-Andean demographic scenarios. Our data reveal that the Peruvian Altiplano was an important enclave for early Paleoindian expansions and point to a genetic continuity in the Andes until recent times, which was only marginally affected by gene flow from the Amazonian lowlands. Genomic variation shows a good fit with the archaeological evidence, indicating that the genetic interactions between the descendants of the settlers that followed the Pacific and Atlantic routes were extremely limited. © 2018 Gómez-Carballa et al.; Published by Cold Spring Harbor Laboratory Press.

SEROEPIDEMIOLOGY OF STRONGYLOIDIASIS IN THE PERUVIAN AMAZON

PubMed Central

YORI, PABLO P.; KOSEK, MARGARET; GILMAN, ROBERT H.; CORDOVA, JULIANNA; BERN, CARYN; CHAVEZ, CESAR BANDA; OLORTEGUI, MARIBEL PAREDES; MONTALVAN, CARMEN; SANCHEZ, GRACIELA MEZA; WORTHEN, BEVELLE; WORTHEN, JAMES; LEUNG, FAY; ORÉ, CARLOS VIDAL

2006-01-01

A stool and serosurvey for Strongyloides stercoralis was conducted in a community in the Peruvian Amazon region. Strongyloidiasis stercoralis was identified in the stool of 69 (8.7%) of 792 participants. Six hundred nine sera were tested using by an enzyme-linked immunosorbent assay (ELISA), which had a sensitivity of 92% and a specificity of 94%; 442 (72%) were positive. In multivariable logistic regression models, having S. stercoralis in stool was associated with hookworm in the same specimen (odds ratio [OR] = 4.44, 95% confidence interval [CI] = 2.02-9.79), occasionally or never wearing shoes (OR = 1.89, 95% CI = 1.10-3.27), and increasing age (OR = 1.012 for each one-year increase, 95% CI = 1.00-1.03). Similarly, occasionally or never wearing shoes (OR = 1.54, 95% CI = 1.01-2.37) and increasing age (OR = 1.04 for each one-year increase, 95% CI = 1.02-1.06) were associated with an increased risk of a positive S. stercoralis ELISA result. The ELISA had a negative predictive value of 98% and is an excellent screening test for strongyloidiasis. PMID:16407351

Antidesmoglein 1 and 3 antibodies in healthy subjects of a population in the Peruvian high amazon.

PubMed

Ramos, Willy; Díaz, Jesús; Gutierrez, Ericson L; Lazarte, Jose S; Bohnett, Mary C; Ronceros, Gerardo; Ortega-Loayza, Alex G

2018-03-01

The objective of this study was to determine the presence of anti-Dsg1 and Dsg3 antibodies in healthy subjects of the high Peruvian Amazon (Tuemal, Rodriguez de Mendoza province, department of Amazonas) to establish the theoretical presence of environmental factors or triggers in the area. Cross-sectional study. The study population included persons of any age or gender, clinically healthy, who were evaluated by a dermatologist to confirm the absence of blistering diseases. Blood samples were analyzed by indirect immunofluorescence (IIF), immunoprecipitation (IP), anti-Dsg1 IgM antibody (Ab) enzyme-linked immunosorbent assay (ELISA), as well as anti-Dsg1 and anti-Dsg3 IgG Ab ELISA. Participants included 21 healthy subjects comprised of 61.9% males and 38.1% females; 47.6% had a positive anti-Dsg1 Ab ELISA for total IgG (or any subclasses). IIF detected antibodies against intercellular spaces in one subject. Anti-Dsg1 Ab IP was mildly positive in 33.3% of the subjects. Anti-Dsg1 IgG subclasses found positive were: IgG1 (19.0%), IgG2 (33.3%), and IgG3 (28.6%); none of the samples were positive for anti-Dsg1 Ab IgM ELISA, and 23.8% of the subjects were positive for anti-Dsg3 Ab ELISA. The age distribution was similar for subjects positive for anti-Dsg1 and anti-Dsg3 Ab ELISA, with higher frequencies found among the 20-29 and 40-49 year-old age groups. A fraction of healthy subjects of the high Peruvian Amazon developed anti-Dsg1 and anti-Dsg3 antibodies, demonstrating the possible presence of environmental factors for endemic pemphigus (EP) at a higher altitude than previously described. © 2017 The International Society of Dermatology.

Rapid Diagnostic Tests for Malaria Diagnosis in the Peruvian Amazon: Impact of pfhrp2 Gene Deletions and Cross-Reactions

PubMed Central

Maltha, Jessica; Gamboa, Dionicia; Bendezu, Jorge; Sanchez, Luis; Cnops, Lieselotte; Gillet, Philippe; Jacobs, Jan

2012-01-01

Background In the Peruvian Amazon, Plasmodium falciparum and Plasmodium vivax malaria are endemic in rural areas, where microscopy is not available. Malaria rapid diagnostic tests (RDTs) provide quick and accurate diagnosis. However, pfhrp2 gene deletions may limit the use of histidine-rich protein-2 (PfHRP2) detecting RDTs. Further, cross-reactions of P. falciparum with P. vivax-specific test lines and vice versa may impair diagnostic specificity. Methods Thirteen RDT products were evaluated on 179 prospectively collected malaria positive samples. Species diagnosis was performed by microscopy and confirmed by PCR. Pfhrp2 gene deletions were assessed by PCR. Results Sensitivity for P. falciparum diagnosis was lower for PfHRP2 compared to P. falciparum-specific Plasmodium lactate dehydrogenase (Pf-pLDH)- detecting RDTs (71.6% vs. 98.7%, p<0.001). Most (19/21) false negative PfHRP2 results were associated with pfhrp2 gene deletions (25.7% of 74 P. falciparum samples). Diagnostic sensitivity for P. vivax (101 samples) was excellent, except for two products. In 10/12 P. vivax-detecting RDT products, cross-reactions with the PfHRP2 or Pf-pLDH line occurred at a median frequency of 2.5% (range 0%–10.9%) of P. vivax samples assessed. In two RDT products, two and one P. falciparum samples respectively cross-reacted with the Pv-pLDH line. Two Pf-pLDH/pan-pLDH-detecting RDTs showed excellent sensitivity with few (1.0%) cross-reactions but showed faint Pf-pLDH lines in 24.7% and 38.9% of P. falciparum samples. Conclusion PfHRP2-detecting RDTs are not suitable in the Peruvian Amazon due to pfhrp2 gene deletions. Two Pf-pLDH-detecting RDTs performed excellently and are promising RDTs for this region although faint test lines are of concern. PMID:22952633

Rapid diagnostic tests for malaria diagnosis in the Peruvian Amazon: impact of pfhrp2 gene deletions and cross-reactions.

PubMed

Maltha, Jessica; Gamboa, Dionicia; Bendezu, Jorge; Sanchez, Luis; Cnops, Lieselotte; Gillet, Philippe; Jacobs, Jan

2012-01-01

In the Peruvian Amazon, Plasmodium falciparum and Plasmodium vivax malaria are endemic in rural areas, where microscopy is not available. Malaria rapid diagnostic tests (RDTs) provide quick and accurate diagnosis. However, pfhrp2 gene deletions may limit the use of histidine-rich protein-2 (PfHRP2) detecting RDTs. Further, cross-reactions of P. falciparum with P. vivax-specific test lines and vice versa may impair diagnostic specificity. Thirteen RDT products were evaluated on 179 prospectively collected malaria positive samples. Species diagnosis was performed by microscopy and confirmed by PCR. Pfhrp2 gene deletions were assessed by PCR. Sensitivity for P. falciparum diagnosis was lower for PfHRP2 compared to P. falciparum-specific Plasmodium lactate dehydrogenase (Pf-pLDH)-detecting RDTs (71.6% vs. 98.7%, p<0.001). Most (19/21) false negative PfHRP2 results were associated with pfhrp2 gene deletions (25.7% of 74 P. falciparum samples). Diagnostic sensitivity for P. vivax (101 samples) was excellent, except for two products. In 10/12 P. vivax-detecting RDT products, cross-reactions with the PfHRP2 or Pf-pLDH line occurred at a median frequency of 2.5% (range 0%-10.9%) of P. vivax samples assessed. In two RDT products, two and one P. falciparum samples respectively cross-reacted with the Pv-pLDH line. Two Pf-pLDH/pan-pLDH-detecting RDTs showed excellent sensitivity with few (1.0%) cross-reactions but showed faint Pf-pLDH lines in 24.7% and 38.9% of P. falciparum samples. PfHRP2-detecting RDTs are not suitable in the Peruvian Amazon due to pfhrp2 gene deletions. Two Pf-pLDH-detecting RDTs performed excellently and are promising RDTs for this region although faint test lines are of concern.

In vitro Antimicrobial Activity of Traditional Plant Used in Mestizo Shamanism from the Peruvian Amazon in Case of Infectious Diseases

PubMed Central

Roumy, Vincent; Gutierrez-Choquevilca, Andréa-Luz; Lopez Mesia, Jean Pierre; Ruiz, Lastenia; Ruiz Macedo, Juan Celidonio; Abedini, Amin; Landoulsi, Ameni; Samaillie, Jennifer; Hennebelle, Thierry; Rivière, Céline; Neut, Christel

2015-01-01

Context: Our survey was performed near Iquitos (Peruvian Amazon) and its surroundings and leads us to consider Mestizo ethnomedical practices. The plant species reported here are traditionally used for ailments related to microbial infections. Inhabitants of various ethnic origins were interviewed, and 52 selected plants extracts were evaluated for their antimicrobial properties against a panel of 36 sensitive and multi-resistant bacteria or yeast. The study aimed at providing information on antimicrobial plant extract activities and the ethnomedical context of Mestizo riverine populations from Loreto (Peru). Material and Method: The minimum inhibitory concentrations (MICs) of the plant crude extracts were carried out using the agar dilution method and ranged between 0.075 and 5.0 mg/ml. Results: Of the 40 plants analyzed, 9 species showed MIC ≤0.3 mg/ml (Anacardium occidentale, Couroupita guianensis, Croton lechleri, Davilla rugosa, Erythrina amazonica, Jacaranda copaia subsp. Spectabilis, Oenocarpus bataua, Peperomia macrostachya, and Phyllanthus urinaria) for one or several of the 36 microorganisms and only 6 drug extracts were inactive. Among the 40 plants, 13 were evaluated for the first time for an antibacterial activity. Conclusion: This evaluation of the antimicrobial activity of 40 plants using an approved standard methodology allowed comparing those activities against various microbes to establish antimicrobial spectra of standardized plant extracts, and give support to the traditional use of these plants. It may also help discovering new chemical classes of antimicrobial agents that could serve against multi-resistant bacteria. SUMMARY This study leads us to consider Mestizo ethnomedical practices near Iquitos (Peruvian Amazon) and its surroundings. The plant species reported here are traditionally used for ailments related to microbial infections. 52 selected plants extracts were evaluated for their antimicrobial properties against a panel of 36 sensitive and multi resistant bacteria or yeast. The study aimed at providing information on antimicrobial plant extract activities and the ethnomedical context of Mestizo riverine populations from Loreto. PMID:27013805

In vitro Antimicrobial Activity of Traditional Plant Used in Mestizo Shamanism from the Peruvian Amazon in Case of Infectious Diseases.

PubMed

Roumy, Vincent; Gutierrez-Choquevilca, Andréa-Luz; Lopez Mesia, Jean Pierre; Ruiz, Lastenia; Ruiz Macedo, Juan Celidonio; Abedini, Amin; Landoulsi, Ameni; Samaillie, Jennifer; Hennebelle, Thierry; Rivière, Céline; Neut, Christel

2015-10-01

Our survey was performed near Iquitos (Peruvian Amazon) and its surroundings and leads us to consider Mestizo ethnomedical practices. The plant species reported here are traditionally used for ailments related to microbial infections. Inhabitants of various ethnic origins were interviewed, and 52 selected plants extracts were evaluated for their antimicrobial properties against a panel of 36 sensitive and multi-resistant bacteria or yeast. The study aimed at providing information on antimicrobial plant extract activities and the ethnomedical context of Mestizo riverine populations from Loreto (Peru). The minimum inhibitory concentrations (MICs) of the plant crude extracts were carried out using the agar dilution method and ranged between 0.075 and 5.0 mg/ml. Of the 40 plants analyzed, 9 species showed MIC ≤0.3 mg/ml (Anacardium occidentale, Couroupita guianensis, Croton lechleri, Davilla rugosa, Erythrina amazonica, Jacaranda copaia subsp. Spectabilis, Oenocarpus bataua, Peperomia macrostachya, and Phyllanthus urinaria) for one or several of the 36 microorganisms and only 6 drug extracts were inactive. Among the 40 plants, 13 were evaluated for the first time for an antibacterial activity. This evaluation of the antimicrobial activity of 40 plants using an approved standard methodology allowed comparing those activities against various microbes to establish antimicrobial spectra of standardized plant extracts, and give support to the traditional use of these plants. It may also help discovering new chemical classes of antimicrobial agents that could serve against multi-resistant bacteria. This study leads us to consider Mestizo ethnomedical practices near Iquitos (Peruvian Amazon) and its surroundings. The plant species reported here are traditionally used for ailments related to microbial infections. 52 selected plants extracts were evaluated for their antimicrobial properties against a panel of 36 sensitive and multi resistant bacteria or yeast. The study aimed at providing information on antimicrobial plant extract activities and the ethnomedical context of Mestizo riverine populations from Loreto.

Establishment of five cover crops and total soil nutrient extraction in a humid tropical soil in the Peruvian Amazon

USDA-ARS?s Scientific Manuscript database

In order to evaluate the establishment of five cover crops and their potential to increase soil fertility through nutrient extraction, an experiment was installed in the Research Station of Choclino, San Martin, Peru. Five cover crops were planted: Arachis pintoi Krapov. & W.C. Greg, Calopogonium m...

Wood anatomy of the neotropical Sapotaceae : XVII. Gambeya

Treesearch

Bohumil Francis Kukachka

1980-01-01

Gambeya is an African genus to which Aubréville added Gambeya excelsa (Huber) Aubr., based on the Amazonian Chrysophyllum excelsum Huber. Whether Gambeya is the appropriate taxon for the American species remains to be resolved. Wood specimens indicate that several species occur in the Americas ranging from Southern Mexico to the Peruvian Amazon. The woods of the...

Forecasting Malaria in the Western Amazon

NASA Astrophysics Data System (ADS)

Pan, W. K.; Zaitchik, B. F.; Pizzitutti, F.; Berky, A.; Feingold, B.; Mena, C.; Janko, M.

2017-12-01

Reported cases of malaria in the western Amazon regions of Peru, Colombia and Ecuador have more than tripled since 2011. Responding to this epidemic has been challenging given large-scale environmental impacts and demographic changes combined with changing financial and political priorities. In Peru alone, malaria cases increased 5-fold since 2011. Reasons include changes in the Global Malaria Fund, massive flooding in 2012, the "mega" El Nino in 2016, and continued natural resource extraction via logging and mining. These challenges prompted the recent creation of the Malaria Cero program in 2017 with the goal to eradicate malaria by 2021. To assist in malaria eradiation, a team of investigators supported by NASA have been developing an Early Warning System for Malaria. The system leverages demographic, epidemiological, meteorological and land use/cover data to develop a four-component system that will improve detection of malaria across the western Amazon Basin. System components include a land data assimilation system (LDAS) to estimate past and future hydrological states and flux, a seasonal human population model to estimate population at risk and spatial connectivity to high risk transmission areas, a sub-regional statistical model to identify when and where observed malaria cases have exceeded those expected, and an Agent Based Model (ABM) to integrate human, environmental, and entomological transmission dynamics with potential strategies for control. Data include: daily case detection reports between 2000 and 2017 from all health posts in the region of Loreto in the northern Peruvian Amazon; LDAS outputs (precipitation, temperature, humidity, solar radiation) at a 1km and weekly scale; satellite-derived estimates of land cover; and human population size from census and health data. This presentation will provide an overview of components, focusing on how the system identifies an outbreak and plans for technology transfer.

Aerial and surface rivers: downwind impacts on water availability from land use changes in Amazonia

NASA Astrophysics Data System (ADS)

Weng, Wei; Luedeke, Matthias K. B.; Zemp, Delphine C.; Lakes, Tobia; Kropp, Juergen P.

2018-02-01

The abundant evapotranspiration provided by the Amazon forests is an important component of the hydrological cycle, both regionally and globally. Since the last century, deforestation and expanding agricultural activities have been changing the ecosystem and its provision of moisture to the atmosphere. However, it remains uncertain how the ongoing land use change will influence rainfall, runoff, and water availability as findings from previous studies differ. Using moisture tracking experiments based on observational data, we provide a spatially detailed analysis recognizing potential teleconnection between source and sink regions of atmospheric moisture. We apply land use scenarios in upwind moisture sources and quantify the corresponding rainfall and runoff changes in downwind moisture sinks. We find spatially varying responses of water regimes to land use changes, which may explain the diverse results from previous studies. Parts of the Peruvian Amazon and western Bolivia are identified as the sink areas most sensitive to land use change in the Amazon and we highlight the current water stress by Amazonian land use change on these areas in terms of the water availability. Furthermore, we also identify the influential source areas where land use change may considerably reduce a given target sink's water reception (from our example of the Ucayali River basin outlet, rainfall by 5-12 % and runoff by 19-50 % according to scenarios). Sensitive sinks and influential sources are therefore suggested as hotspots for achieving sustainable land-water management.

Living Rivers: Importance of Andes-Amazon Connectivity and Consequences of Hydropower Development

NASA Astrophysics Data System (ADS)

Anderson, E.

2016-12-01

The inherent dynamism of rivers along elevational and longitudinal gradients underpins freshwater biodiversity, ecosystem function, and ecosystem services in the Andean-Amazon. While this region covers only a small part of the entire Amazon Basin, its influences on downstream ecology, biogeochemistry, and human wellbeing are disproportionate with its relative small size. Seasonal flow pulses from Andean rivers maintain habitat, signal migratory fishes, and export sediment, nutrients, and organic matter to distant ecosystems—like lowland Amazonia and the Atlantic coast of Brazil. Rivers are key transportation routes, and freshwater fisheries are a primary protein source for the >30 million people that inhabit the Amazon Basin. Numerous cultural traditions depend on free-flowing Andean rivers; examples include Kukama beliefs in the underwater cities of the Marañon River, where people who have drowned in rivers whose bodies are not recovered go to live, or the pre-dawn bathing rituals of the Peruvian Shawi, who gain energy and connect with ancestors in cold, fast-flowing Andean waters. Transformations in the Andean-Amazon landscape—in particular from dams—threaten to compromise flows critical for human and ecosystem wellbeing. Presently, at least 250 hydropower dams are in operation, under construction, or proposed for Andean-Amazon rivers. This presentation will discuss regional trends in hydropower development, quantify effects of existing and proposed dams on Andean-Amazon connectivity, and examine the social and cultural importance of free-flowing Andean-Amazon rivers.

Trading forests for yields in the Peruvian Amazon

NASA Astrophysics Data System (ADS)

Gibbs, Holly

2012-03-01

Our knowledge of how agriculture expands, and the types of land it replaces, is remarkably limited across the tropics. Most remote-sensing studies focus on the net gains and losses in forests and agricultural land rather than the land-use transition pathways (Gibbs et al 2010). Only a handful of studies identify land sources for new croplands or plantations, and then only for farming systems aggregated together (e.g., Koh and Wilcove 2008, Morton et al 2006, Gibbs et al 2010). Gutiérrez-Vélez et al (2011), however, have taken a leap forward by tracking the different expansion pathways for smallholder and industrial oil palm plantations. Using a combination of Landsat, MODIS and field surveys, they investigate whether higher yields in new agricultural lands spare forests in the Peruvian Amazon and in a smaller focus area in the Ucayali region. Across the Peruvian Amazon, they show that between 2000 and 2010, new high-yield oil palm plantations replaced forests 72% of the time and accounted for 1.3% of total deforestation, with most expansion occurring after 2006. Gutiérrez-Vélez et al went further in the Ucayali region and compared land sources for new high-yield and low-yield plantations. Expansion of higher-yield agricultural lands should logically reduce the total area needed for production, thus potentially sparing forests. In the Ucayali focus area, expansion of high-yield oil palm did convert less total land area but more forest was cleared than with low-yield expansion. Smaller-scale plantations tended to expand into already cleared areas while industrial-scale plantations traded their greater yields for forests, leading to higher land-clearing carbon emissions per production unit (Gibbs et al 2008). Gutiérrez-Vélez et al show that higher yields may require less land for production but more forest may be lost in the process, and they emphasize the need for stronger incentives for land sparing. The potential land-saving nature of these high-yield plantations could be further analyzed by considering whether they help depress global prices, reducing incentives to expand elsewhere (Angelsen and Kaimowitz 2001). The significance of the study goes well beyond the bounds of Ucayli, and highlights risks to Amazonian forests from oil palm expansion (Butler and Laurance 2010). Oil palm is an astoundingly profitable and productive crop, with typical oil yields more than ten times that of soy. Some have even argued that oil palm is innately land sparing because it would take substantially more land for all other oil-bearing crops to provide the same output. However, most production gains from oil palm have occurred through increased area rather than increased yield, and in many cases expansion has been through forest clearing (Koh and Wilcove 2008, Gibbs et al 2010). The findings of Gutiérrez-Vélez et al (2011) are particularly significant considering that the booming palm oil sectors in Indonesia and Malaysia, which currently produce over 80% of the world's product, are facing a host of pressures that constrain future area expansion. Malaysia has little remaining land suited for plantations and Indonesia faces intensifying international scrutiny over the future of their forestlands. Consequently, the Amazon basin is widely considered the new frontier, with more than half of its forest area suitable for palm oil cultivation (Butler and Laurance 2010) and growing incentives from Brazil's Program for the Sustainable Production of Oil Palm, which aims to utilize degraded lands and spur reforestation efforts. Their results also illuminate another key issue, namely the constraints faced by large-scale producers when they seek to expand plantation area. Emerging demand-side conservation efforts, such as the Roundtable for Sustainable Palm Oil (RSPO), assume that already cleared and non-forested lands are freely available. Gutiérrez-Vélez et al (2011) hint at the obstacles to using such cleared lands, which is that they are inhabited and often have contested land tenure. We must carefully consider our consumption of these commodities in the face of growing land scarcity (Lambin and Meyfroidt 2011). If high-yield plantations displace low-yield plantations they too may follow the path of industrial agriculture and resume destruction of the forests that conservation efforts aim to protect. Without clear incentives to spare land, we could be trading forest for higher yields. References Angelsen A and Kaimowitz D 2001 Agricultural Technologies and Tropical Deforestation (New York: CABI Publishing) (www.cifor.org/publications/pdf files/books/bangelsen0101e0.pdf) Butler R and Laurance W 2010 Is oil palm the next emerging threat to the Amazon? Trop. Conserv. Sci. 2 1-10 Gibbs H K, Johnston M, Foley J A, Holloway T, Monfreda C, Ramankutty N and Zaks D 2008 Carbon payback times for crop-based biofuel expansion in the tropics: the effects of changing yield and technology Environ. Res. Lett. 3 034001 Gibbs H K, Ruesch A S, Achard F, Clayton M K, Holmgren P, Ramankutty N and Foley J A 2010 Tropical forests were the primary sources of new agricultural land in the 1980s and 1990s Proc. Natl Acad. Sci. 107 16732-7 Gutiérrez-Vélez V H, DeFries R, Pinedo-Vásquez M, Uriarte M, Padoch C, Baethgen W, Fernandes K and Lim Y 2011 High-yield oil palm expansion spares land at the expense of forests in the Peruvian Amazon Environ. Res. Lett. 6 044029 Koh L and Wilcove D 2008 Is oil palm agriculture really destroying tropical biodiversity? Conserv. Lett. 1 60-4 Lambin E and Meyfroidt P 2011 Inaugural article: global land use change, economic globalization, and the looming land scarcity Proc. Natl Acad. Sci. 108 93465-72 Morton D C et al 2006 Cropland expansion changes deforestation dynamics in the southern Brazilian Amazon Proc. Natl Acad. Sci. USA 103 14637-41

77 FR 40171 - Endangered and Threatened Wildlife and Plants; Two Foreign Macaw Species

Federal Register 2010, 2011, 2012, 2013, 2014

2012-07-06

... the Madre de Dios department in the southeastern Peruvian Amazon (Lee 2010, p. 14). Flocks of 40 to 50 individuals have been observed in Atalya at Madre de Dios (Snyder et al. 2000, p. 125). The species has been... eastern slope of the Sierra Madre Oriental mountain range, known locally as the ``Sierra de Guatemala...

Determinants of Caregivers' Use and Adoption of Household Water Chlorination: A Qualitative Study with Peri-Urban Communities in the Peruvian Amazon.

PubMed

Rothstein, Jessica D; Leontsini, Elli; Olortegui, Maribel Paredes; Yori, Pablo Peñataro; Surkan, Pamela J; Kosek, Margaret

2015-09-01

The gap between the efficacy and the effectiveness of household water treatment in reducing diarrhea-related morbidity indicates the need for a better understanding of the determinants of long-term behavior change. To explore the barriers to drinking water chlorination in the Peruvian Amazon, where diarrhea is endemic among under-5 children, we conducted qualitative research with 23 caregivers from peri-urban communities of Iquitos, Peru. Our inquiry drew on the Transtheoretical Model of behavior change and the Integrated Behavioral Model for Water, Sanitation, and Hygiene to identify the most relevant contextual, psychosocial, and technological determinants of initial action and long-term adoption of chlorination. Our findings suggest that the decision to try out this practice resulted from the combined effect of knowledge of chlorination benefits and product availability and affordability. Progress from action to adoption was influenced by caretakers' understanding of dosage, the packaging of chlorine products, knowledge and skills for multipurpose laundry bleach, the taste of treated water, and reinforcement. This analysis suggests that a focus on these determinants and the household domain may help to improve the sustainability of future intervention efforts. © The American Society of Tropical Medicine and Hygiene.

Exploration of Vanilla pompona from the Peruvian Amazon as a potential source of vanilla essence: quantification of phenolics by HPLC-DAD.

PubMed

Maruenda, Helena; Vico, Maria del Lujan; Householder, J Ethan; Janovec, John P; Cañari, Cristhian; Naka, Angelica; Gonzalez, Ana E

2013-05-01

This study provides the first chemical investigation of wild-harvested fruits of Vanilla pompona ssp. grandiflora (Lindl.) Soto-Arenas developed in their natural habitat in the Peruvian Amazon. Flowers were hand-pollinated and the resulting fruits were analysed at different developmental stages using an HPLC-DAD method validated for the quantification of glucovanillin and seven other compounds. The method showed satisfactory linearity (r(2)>0.9969), precision (coefficient of variation <2%), recoveries (70-100%), limit of detection (0.008-0.212 μg/ml), and limit of quantification (0.027-0.707 μg/ml). The evaluation of crude and enzyme-hydrolyzed Soxhlet-extracted samples confirmed the leading role of glucosides in fruit development. LC-ESI-MS studies corroborated the identities of four glucosides and seven aglycones, among them vanillin (5.7/100 g), 4-hydroxybenzyl alcohol (3.6/100 g), and anisyl alcohol (7.1/100 g) were found in high concentrations. The attractive flavor/aroma profile exhibited by wild V. pompona fruits supports studies focused on the development of this species as a specialty crop. Copyright © 2012 Elsevier Ltd. All rights reserved.

Continuous Supply of Plasmodium vivax Sporozoites from Colonized Anopheles darlingi in the Peruvian Amazon

PubMed Central

2018-01-01

In vitro culture of Plasmodium vivax liver stages underlies key understandings of the fundamental biology of this parasite, particularly the latent, hyponozoite stage, toward drug and vaccine development. Here, we report systematic production of Plasmodium vivax sporozoites in colonized Anopheles darlingi mosquitoes in the Peruvian Amazon. Human subject-derived P. vivax-infected blood was fed to Anopheles darlingi females using standard membrane feedings assays. Optimizing A. darlingi infection and sporozoite production included replacement of infected patient donor serum with naïve donor serum, comparing anticoagulants in processing blood samples, and addition of penicillin–streptomycin and ATP to infectious blood meals. Replacement of donor serum by naïve serum in the P. vivax donor blood increased oocysts in the mosquito midgut, and heparin, as anticoagulant, was associated with the highest sporozoite yields. Maintaining blood-fed mosquitoes on penicillin–streptomycin in sugar significantly extended mosquito survival which enabled greater sporozoite yield. In this study, we have shown that a robust P. vivax sporozoite production is feasible in a malaria-endemic setting where infected subjects and a stable A. darlingi colony are brought together, with optimized laboratory conditions. PMID:29465219

Continuous Supply of Plasmodium vivax Sporozoites from Colonized Anopheles darlingi in the Peruvian Amazon.

PubMed

Moreno, Marta; Tong-Rios, Carlos; Orjuela-Sanchez, Pamela; Carrasco-Escobar, Gabriel; Campo, Brice; Gamboa, Dionicia; Winzeler, Elizabeth A; Vinetz, Joseph M

2018-04-13

In vitro culture of Plasmodium vivax liver stages underlies key understandings of the fundamental biology of this parasite, particularly the latent, hyponozoite stage, toward drug and vaccine development. Here, we report systematic production of Plasmodium vivax sporozoites in colonized Anopheles darlingi mosquitoes in the Peruvian Amazon. Human subject-derived P. vivax-infected blood was fed to Anopheles darlingi females using standard membrane feedings assays. Optimizing A. darlingi infection and sporozoite production included replacement of infected patient donor serum with naïve donor serum, comparing anticoagulants in processing blood samples, and addition of penicillin-streptomycin and ATP to infectious blood meals. Replacement of donor serum by naïve serum in the P. vivax donor blood increased oocysts in the mosquito midgut, and heparin, as anticoagulant, was associated with the highest sporozoite yields. Maintaining blood-fed mosquitoes on penicillin-streptomycin in sugar significantly extended mosquito survival which enabled greater sporozoite yield. In this study, we have shown that a robust P. vivax sporozoite production is feasible in a malaria-endemic setting where infected subjects and a stable A. darlingi colony are brought together, with optimized laboratory conditions.

Determinants of Caregivers' Use and Adoption of Household Water Chlorination: A Qualitative Study with Peri-urban Communities in the Peruvian Amazon

PubMed Central

Rothstein, Jessica D.; Leontsini, Elli; Olortegui, Maribel Paredes; Yori, Pablo Peñataro; Surkan, Pamela J.; Kosek, Margaret

2015-01-01

The gap between the efficacy and the effectiveness of household water treatment in reducing diarrhea-related morbidity indicates the need for a better understanding of the determinants of long-term behavior change. To explore the barriers to drinking water chlorination in the Peruvian Amazon, where diarrhea is endemic among under-5 children, we conducted qualitative research with 23 caregivers from peri-urban communities of Iquitos, Peru. Our inquiry drew on the Transtheoretical Model of behavior change and the Integrated Behavioral Model for Water, Sanitation, and Hygiene to identify the most relevant contextual, psychosocial, and technological determinants of initial action and long-term adoption of chlorination. Our findings suggest that the decision to try out this practice resulted from the combined effect of knowledge of chlorination benefits and product availability and affordability. Progress from action to adoption was influenced by caretakers' understanding of dosage, the packaging of chlorine products, knowledge and skills for multipurpose laundry bleach, the taste of treated water, and reinforcement. This analysis suggests that a focus on these determinants and the household domain may help to improve the sustainability of future intervention efforts. PMID:26175028

A new species of small-eared shrew of the genus Cryptotis (Mammalia, Eulipotyphla, Soricidae) from the northernmost Peruvian Andes.

PubMed

Zeballos, Horacio; Pino, Kateryn; Medina, CÉsar E; Pari, Alexander; ChÁvez, Daniel; Tinoco, NicolÁs; Ceballos, Gerardo

2018-01-31

The northernmost Peruvian Andes, a unique biogeographic region characterized by the confluence of multiple distinct ecosystems (i.e. Amazon basin, Pacific rainforest, the Sechura Desert, the northern and central Andes), is the southernmost geographic range limit of the South American shrews representing the genus Cryptotis. In the northernmost Peruvian Andes, two poorly known species have traditionally been reported (C. peruviensis and C. equatoris). Our study, based on molecular and morphologic traits, confirms the presence of C. peruviensis but also the occurrence of C. montivaga, based on specimens erroneously assigned to C. equatoris. Moreover, a new species of Cryptotis from the páramo and montane forests of the Tabaconas Namballe National Sanctuary near the Ecuadorian border is also described. It is a member of the thomasi group and is distinguished from other South American shrews by a unique set of morphological characters, including large body size, comparatively short tail, simple ectoloph of M3, and large PM4 post protocrista.

Gold mining in the Peruvian Amazon: global prices, deforestation, and mercury imports.

PubMed

Swenson, Jennifer J; Carter, Catherine E; Domec, Jean-Christophe; Delgado, Cesar I

2011-04-19

Many factors such as poverty, ineffective institutions and environmental regulations may prevent developing countries from managing how natural resources are extracted to meet a strong market demand. Extraction for some resources has reached such proportions that evidence is measurable from space. We present recent evidence of the global demand for a single commodity and the ecosystem destruction resulting from commodity extraction, recorded by satellites for one of the most biodiverse areas of the world. We find that since 2003, recent mining deforestation in Madre de Dios, Peru is increasing nonlinearly alongside a constant annual rate of increase in international gold price (∼18%/yr). We detect that the new pattern of mining deforestation (1915 ha/year, 2006-2009) is outpacing that of nearby settlement deforestation. We show that gold price is linked with exponential increases in Peruvian national mercury imports over time (R(2) = 0.93, p = 0.04, 2003-2009). Given the past rates of increase we predict that mercury imports may more than double for 2011 (∼500 t/year). Virtually all of Peru's mercury imports are used in artisanal gold mining. Much of the mining increase is unregulated/artisanal in nature, lacking environmental impact analysis or miner education. As a result, large quantities of mercury are being released into the atmosphere, sediments and waterways. Other developing countries endowed with gold deposits are likely experiencing similar environmental destruction in response to recent record high gold prices. The increasing availability of satellite imagery ought to evoke further studies linking economic variables with land use and cover changes on the ground.

The first isolations of eastern encephalitis, group C, and Guama group arboviruses from the Peruvian Amazon region of western South America.

PubMed

Scherer, W F; Madalengoitia, J; Flores, W; Acosta, M

1975-01-01

Two strains of eastern encephalitis (EE) virus were isolated in the Amazon region of Peru near Pucallpa, Loreto Department, using sentinel hamsters. EE virus antibodies were found in healthy horses at both Pucallpa and Iquitos in the same Department. Fourteen group C and four Guama group arboviruses were recovered from sentenel hamsters and mosquitoes near Iquitos. The group C agents were Caraparu-Ossa, Marituba, and Oriboca-Itaqui viruses, and the Guama group agents were Bimiti virus. Besides providing a detailed account of these investigations, this article includes a current list of known arboviruses of the American tropics that can be detected with sentinel hamsters.

Peru-Bolivia border, part of Amazon Basin, and the SLS-2 laboratory module

NASA Image and Video Library

1993-10-24

STS058-76-041 (18 Oct-1 Nov 1993) --- Backdropped against the Peru-Bolivia border and part of the Amazon basin, the Spacelab Life Sciences (SLS-2) laboratory module was captured with a 70mm camera, by one of the seven crew members inside the Space Shuttle Columbia's cabin. Part of the tunnel-like passageway is visible in the foreground. Six NASA astronauts and a veterinarian from the private sector spent two weeks devoted to medical research in Earth-orbit. Lake Titicaca, the largest high-altitude lake in the world lies in the Altiplano of Bolivia and Peru. Space Shuttle photography has been used to document fluctuations of several meters of the level of Lake Titicaca during the past decade, as well as to document the eutrophication of the north end of the lake, which is primarily due to increased population in the Peruvian shoreline areas. This view shows the effect of abnormally heavy precipitation of the region for the third successive year. Meteorologists feel this precipitation increase, which may portend another increase of the lake level, is due to the third successive El Nino - Southern Oscillation phenomenon in the 1993 - 94 southern hemisphere summertime. This global phenomenon is now resulting in major weather disturbances in Indonesia, California, Texas and elsewhere.

Anti-inflammatory activity of animal oils from the Peruvian Amazon.

PubMed

Schmeda-Hirschmann, Guillermo; Delporte, Carla; Valenzuela-Barra, Gabriela; Silva, Ximena; Vargas-Arana, Gabriel; Lima, Beatriz; Feresin, Gabriela E

2014-10-28

Animal oils and fats from the fishes Electrophorus electricus and Potamotrygon motoro, the reptiles Boa constrictor, Chelonoidis denticulata (Geochelone denticulata) and Melanosuchus niger and the riverine dolphin Inia geoffrensis are used as anti-inflammatory agents in the Peruvian Amazon. The aim of the study was to assess the topic anti-inflammatory effect of the oils/fats as well as to evaluate its antimicrobial activity and fatty acid composition. The oils/fats were purchased from a traditional store at the Iquitos market of Belen, Peru. The topic anti-inflammatory effect was evaluated by the mice ear edema induced by arachidonic acid (AA) and 12-O-tetradecanoylphorbol-13-acetate (TPA) at the dose of 3mg oil/ear. Indomethacine and nimesulide were used as reference anti-inflammatory drugs. The application resembles the traditional topical use of the oils. The antimicrobial effect of the oils/fats was assessed by the microdilution test against reference strains of Escherichia coli, Staphylococcus aureus and Salmonella enteritidis. The fatty acid composition of the oils/fats (as methyl esters) was determined by GC and GC-MS analysis after saponification. All oils/fats showed topic anti-inflammatory activity, with better effect in the TPA-induced mice ear edema assay. The most active drugs were Potamotrygon motoro, Melanosuchus niger and Geochelone denticulata. In the AA-induced assay, the best activity was found for Potamotrygon motoro and Electrophorus electricus oil. The oil of Electrophorus electricus also showed a weak antimicrobial effect with MIC values of 250 µg/mL against Escherichia coli ATCC 25922 and Salmonella enteritidis-MI. The main fatty acids in the oils were oleic, palmitic and linoleic acids. Topical application of all the oils/fats investigated showed anti-inflammatory activity in the mice ear edema assay. The effect can be related with the identity and composition of the fatty acids in the samples. This study gives support to the traditional use of animal oils/fats as ant-inflammatory agents in the Peruvian Amazon. However, new alternative should be encouraged due to the conservation status of several of the animal sources of the crude drugs. Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Short term effects of fire on soil respiration in Peruvian Amazon

NASA Astrophysics Data System (ADS)

Suarez, L. F.; Kruijt, B.

2008-05-01

Severe changes are affecting the role of Amazon in the Earth system. One of these possible effects could be the modification of the role of soils in the carbon cycle due to land use and land cover change activities mainly involving the change of forest by crops. In this sense, fire is the main tool used by farmers for land use and also is an important factor for mobilizing C from the soil to the atmosphere, mainly as CO2. This could have an important effect in the global warming. This proposal will evaluate the variation of the soil respiration related to the seasonality and the fire effects on soils in the Amazon of Peru and Brazil. In experimental locations of Peru with different vegetation cover (forest and pasture), we measured soil respiration along with the organic carbon and the microbial biomass of soils during campaigns covering wet and dry seasons. Complementary measurements of soil temperature, water and nutrient content were performed. Also, we reproduced a fire experiment simulating agricultural local activity by the technique of "slash and burn" to evaluate fire effects on soil respiration. Measurements were taken after the soil cooled and at least 3 days after the fire. Additionally, the carbon stocks of the subplots were evaluated. Evaluation of the variations of CO2 fluxes and the capacity of adaptation to fire and water content are discussed through the comparisons of the different locations, type of soils and concentration of available N (nitrate and ammonium) as an indicator of nutrient content.

Andean settlers rush for Amazonia.

PubMed

Serra-vega, J

1990-01-01

Governments of Andean countries (Peru, Bolivia, Colombia, Ecuador, and Venezuela) have encouraged migration to the Amazon Basin, which has contributed to its destruction. Population pressure, landlessness, and poverty are the inducements to migrate. Efforts to populate the Amazon forest were begun as early as 1964 in Peru without international notice. By 1980, logging was allowed in Peru, and Brazil considered colonization of the Amazon essential to national sovereignty. By 1986, outside of Lima, Peru, a development project originally funded by the World Bank, the InterAmerican Development Bank, and the US, resulted in conflicts between settlers and Indians, in loggers indiscriminately cutting, and in farmers using slash and burn techniques to clear forests. Elsewhere the Peruvian Amazon, in San Ignacio, the population was growing by 5.5%/year. The jungle road that had been started but never completed, Carretera Marginal, destroyed 5 million hectares of primary forest, and much of the 600,000 hectares of arable land gained by the road suffered from inappropriate farming practices which caused massive erosion and laterization of the soils. Food crop production declined, and production of coca for cocaine increased. Coca crops are controlled by the Shining Path guerrillas, who are trying to overthrow the Peruvian government. Devastation of Ecuador around Lago Agrio continues. In Colombia, east of Bogota, forests have disappeared and hills have eroded and silted up rivers and dams. The Andean piedmont in Bolivia has also been devastated by loggers and by slash and burn farming. Southeastern Bolivian forests have been cleared for soya bean cultivation on poor soils. Social and economic crises propel people into the remaining forests. The solution is to ease foreign debt, transfer appropriate technology at affordable prices, refuse to finance destructive development, and help to educate and train scientific researchers. Family planning services are also urgently needed. Basic facts on population, biodiversity, the greenhouse effect, deforestation, roads, iron, gold, and Indians is provided.

Area Assessment: Peru.

DTIC Science & Technology

1985-09-24

covers over half the country, including the vast Amazon River Basin and the Madre de Dio River Basin. The sierra, which makes up over one-fourth of Peru...departments. d. FOURTH (HQ CUSCO): Puno, Cusco, Apurimac, Junin, Pasco, Huanuco, San Martin, Auacucho, and Madre de Dios departments. e. FIFTH (HQ...panies. In Peru the gold boom began in 1978 in the southeastern jungle region ( Madre de Dios ) when the Peruvian Government issued Decree-Law No. 22178

U.S. Army Medical Department Journal, April-June 2008

DTIC Science & Technology

2008-06-01

IGR), against dengue vector mosquitoes. In the Peruvian Amazon community at Iquitos, Stancil42 (Naval Medical Research Center Detachment, Peru ...Research Unit- Kenya, Nairobi; Naval Medical Research Center Detachment, Lima, Peru ; Naval Medical Research Unit-2, Jakarta, Indonesia; and the Naval...These projects have revealed that sand flies often emerge from the soil beneath tents and camps. In an effort to prevent sand flies breeding in rodent

Tuberculosis and nutrition: disease perceptions and health seeking behavior of household contacts in the Peruvian Amazon

PubMed Central

Baldwin, M. R.; Yori, P. P.; Ford, C.; Moore, D. A. J.; Gilman, R. H.; Vidal, C.; Ticona, E.; Evans, C. A.

2010-01-01

SETTING Households of TB patients in the Peruvian Amazon. OBJECTIVE To investigate how knowledge and beliefs of household contacts about TB affected health seeking behavior. DESIGN Interviews with 73 patients finishing treatment and 79 of their adult household contacts. RESULTS Contacts were knowledgeable about free screening and treatment, but contacts who noted weight loss, not cough, were more likely to be screened for TB (P = 0.03). Forty-two per cent reported that TB was prevented by nutrition, 28% by separating eating utensils, and only 19% by avoiding a coughing patient. Only one household contact reported being stigmatized. Stigma centered upon nutrition, and only 12% knew of the association between TB and HIV. Only 14% had a BMI <20, yet 30% reported regularly going to sleep hungry. Free food packages were reported to be the most important reason for treatment adherence by 33% of patients. CONCLUSION Contacts misperceived TB as a nutritional disease and did not fear airborne transmission, which should be corrected by public health education. Weight loss, and not cough, led to screening. Stigma appeared to be minimized because risk was perceived as personal, through malnutrition, rather than exposure-based. Nutritional incentives that utilize these beliefs may reduce diagnostic delay and enhance treatment adherence. PMID:15636496

Attenuated CagA oncoprotein in Helicobacter pylori from Amerindians in Peruvian Amazon.

PubMed

Suzuki, Masato; Kiga, Kotaro; Kersulyte, Dangeruta; Cok, Jaime; Hooper, Catherine C; Mimuro, Hitomi; Sanada, Takahito; Suzuki, Shiho; Oyama, Masaaki; Kozuka-Hata, Hiroko; Kamiya, Shigeru; Zou, Quan-Ming; Gilman, Robert H; Berg, Douglas E; Sasakawa, Chihiro

2011-08-26

Population genetic analyses of bacterial genes whose products interact with host tissues can give new understanding of infection and disease processes. Here we show that strains of the genetically diverse gastric pathogen Helicobacter pylori from Amerindians from the remote Peruvian Amazon contain novel alleles of cagA, a major virulence gene, and reveal distinctive properties of their encoded CagA proteins. CagA is injected into the gastric epithelium where it hijacks pleiotropic signaling pathways, helps Hp exploit its special gastric mucosal niche, and affects the risk that infection will result in overt gastroduodenal diseases including gastric cancer. The Amerindian CagA proteins contain unusual but functional tyrosine phosphorylation motifs and attenuated CRPIA motifs, which affect gastric epithelial proliferation, inflammation, and bacterial pathogenesis. Amerindian CagA proteins induced less production of IL-8 and cancer-associated Mucin 2 than did those of prototype Western or East Asian strains and behaved as dominant negative inhibitors of action of prototype CagA during mixed infection of Mongolian gerbils. We suggest that Amerindian cagA is of relatively low virulence, that this may have been selected in ancestral strains during infection of the people who migrated from Asia into the Americas many thousands of years ago, and that such attenuated CagA proteins could be useful therapeutically.

Andes Altiplano, South America

NASA Image and Video Library

1991-08-11

STS043-151-159 (2-11 August 1991) --- This photograph looks westward over the high plateau of the southern Peruvian Andes west and north of Lake Titicaca (not in field of view). Lima, Peru lies under the clouds just north of the clear coastal area. Because the high Andes have been uplifted 10,000 to 13,000 feet during the past 20 million years, the rivers which cut down to the Pacific Ocean have gorges almost that deep, such as the Rio Ocona at the bottom of the photograph. The eastern slopes of the Andes are heavily forested, forming the headwaters of the Amazon system. Smoke from burning in the Amazon basin fills river valleys on the right side of the photograph. A Linhof camera was used to take this view.

Gold Mining in the Peruvian Amazon: Global Prices, Deforestation, and Mercury Imports

PubMed Central

Swenson, Jennifer J.; Carter, Catherine E.; Domec, Jean-Christophe; Delgado, Cesar I.

2011-01-01

Many factors such as poverty, ineffective institutions and environmental regulations may prevent developing countries from managing how natural resources are extracted to meet a strong market demand. Extraction for some resources has reached such proportions that evidence is measurable from space. We present recent evidence of the global demand for a single commodity and the ecosystem destruction resulting from commodity extraction, recorded by satellites for one of the most biodiverse areas of the world. We find that since 2003, recent mining deforestation in Madre de Dios, Peru is increasing nonlinearly alongside a constant annual rate of increase in international gold price (∼18%/yr). We detect that the new pattern of mining deforestation (1915 ha/year, 2006–2009) is outpacing that of nearby settlement deforestation. We show that gold price is linked with exponential increases in Peruvian national mercury imports over time (R2 = 0.93, p = 0.04, 2003–2009). Given the past rates of increase we predict that mercury imports may more than double for 2011 (∼500 t/year). Virtually all of Peru's mercury imports are used in artisanal gold mining. Much of the mining increase is unregulated/artisanal in nature, lacking environmental impact analysis or miner education. As a result, large quantities of mercury are being released into the atmosphere, sediments and waterways. Other developing countries endowed with gold deposits are likely experiencing similar environmental destruction in response to recent record high gold prices. The increasing availability of satellite imagery ought to evoke further studies linking economic variables with land use and cover changes on the ground. PMID:21526143

Genetic differentiation and trade among populations of peach palm ( Bactris gasipaes Kunth) in the Peruvian Amazon-implications for genetic resource management.

PubMed

Adin, A; Weber, J C; Sotelo Montes, C; Vidaurre, H; Vosman, B; Smulders, M J M

2004-05-01

Peach palm ( Bactris gasipaes Kunth) is cultivated for fruit and 'heart of palm', and is an important component of agroforestry systems in the Peruvian Amazon. In this study, AFLP was used to compare genetic diversity among domesticated populations along the Paranapura and Cuiparillo rivers, which are managed by indigenous and colonist farming communities, respectively. Gene diversity was 0.2629 for the populations in indigenous communities and 0.2534 in colonist communities. Genetic differentiation among populations ( G(st)) was 0.0377-0.0416 ( P<0.01) among populations along both rivers. There was no relation between genetic differentiation and the geographical location of populations along the rivers. Since natural seed dispersal by birds and rodents is thought to occur only across relatively short distances (100-200 m), it is likely that exchange of material by farmers and commercial traders is responsible for most of the 'long-distance' (over more than 20 km) gene flow among populations along the two rivers studied. This exchange of material may be important to counteract the effects of selection as well as genetic drift in small groups of trees in farmers' fields, much as in a metapopulation, and may account for the weak genetic differentiation between the two rivers ( G(st)=0.0249, P<0.01). A comparison with samples from other landraces in Peru and Brazil showed the existence of an isolation-by-distance structure up to 3,000 km, consistent with gene flow on a regional scale, likely mediated by trade in the Amazon Basin. Results are discussed with regard to practical implications for the management of genetic resources with farming communities.

Prevalence of soil-transmitted helminths after mass albendazole administration in an indigenous community of the Manu jungle in Peru.

PubMed

Cabada, Miguel M; Lopez, Martha; Arque, Eulogia; Clinton White, A

2014-06-01

Few data are available on the epidemiology of soil-transmitted helminths (STHs) in indigenous populations of the Peruvian Amazon. While albendazole is being increasingly used in deworming campaigns, few data exist on the impact of mass drug administration in isolated populations. We studied the prevalence of STHs, anemia, and malnutrition in a Matsigenka ethnic group from the Peruvian Amazon. Participants had received two doses of albendazole on consecutive days, 3 months before and again 2 weeks before data collection. Overall, 290 subjects were included. Most were female (53.7%) and 63.9% were ≤19 years old. Half of the participants had helminth infections. Trichiuris (30.2%), hookworm (19.1%), Ascaris (17.7%), and Strongyloides (5.6%) were the most common helminths. Other helminth ova included Capillaria hepatica and Fasciola-like eggs. Subjects of 5-19 years (51.8 %) and 20-35 years (68.6 %) old had helminths more often than those under 5 years (38%) and older than 35 years (41.5%) (P  =  0.02). Anemia was detected in 41% of children and this was more common in children under 5 years that in those of 5-19 years [odd ratio (OR) = 5.68; 95% CI: 2.71-11.88]. Overall, 72.1% of children were malnourished. Stunting was common in children (70.7%), but wasting was not (2.9%). Despite repeated albendazole administration, this population continued to have a high prevalence of STHs, anemia, and malnutrition. In addition, we detected unusual organisms and organisms that do not respond to albendazole. Further studies are needed to assess the rationale and efficacy of mass chemotherapy for STHs in the Amazon.

Prevalence of soil-transmitted helminths after mass albendazole administration in an indigenous community of the Manu jungle in Peru

PubMed Central

Cabada, Miguel M; Lopez, Martha; Arque, Eulogia; Clinton White, A

2014-01-01

Few data are available on the epidemiology of soil-transmitted helminths (STHs) in indigenous populations of the Peruvian Amazon. While albendazole is being increasingly used in deworming campaigns, few data exist on the impact of mass drug administration in isolated populations. We studied the prevalence of STHs, anemia, and malnutrition in a Matsigenka ethnic group from the Peruvian Amazon. Participants had received two doses of albendazole on consecutive days, 3 months before and again 2 weeks before data collection. Overall, 290 subjects were included. Most were female (53.7%) and 63.9% were ≤19 years old. Half of the participants had helminth infections. Trichiuris (30.2%), hookworm (19.1%), Ascaris (17.7%), and Strongyloides (5.6%) were the most common helminths. Other helminth ova included Capillaria hepatica and Fasciola-like eggs. Subjects of 5–19 years (51.8 %) and 20–35 years (68.6 %) old had helminths more often than those under 5 years (38%) and older than 35 years (41.5%) (P  =  0.02). Anemia was detected in 41% of children and this was more common in children under 5 years that in those of 5–19 years [odd ratio (OR)  =  5.68; 95% CI: 2.71–11.88]. Overall, 72.1% of children were malnourished. Stunting was common in children (70.7%), but wasting was not (2.9%). Despite repeated albendazole administration, this population continued to have a high prevalence of STHs, anemia, and malnutrition. In addition, we detected unusual organisms and organisms that do not respond to albendazole. Further studies are needed to assess the rationale and efficacy of mass chemotherapy for STHs in the Amazon. PMID:24934795

Trypanosoma evansi isolated from capybara (Hidrochaeris hidrochaeris).

PubMed

Muñoz, K; Chávez, A

2001-10-01

A study was conducted to determine the morphological and biometric characteristics of Trypanosoma isolated from 50 capybaras animals, raised in captivity in the Peruvian Amazon. Trypanosoma was found in 14 blood samples using the microhaematocrit, wide drop, and Giemsa-stain methods and T. evansi was identified through morphological details in all 14 positive samples (the subterminal kinetoplast, the developed undulating membrane, and a long free flagellum were used for the identification of the agent).

Biennial Conference on the Biology of Marine Mammals (10th), Held in Galveston, Texas on November 11-15, 1993

DTIC Science & Technology

1993-11-15

RESERVE, PERUVIAN AMAZON mate, Bruce R. Leatherwood. Stephen Oregon State University, Hatfield Marine Science Center, Newport, OR IUCN/SSC Cetacean...River, Peru , to determine distribution, density and habitat reasonably important areas remain largely unknown. Often little is also allocation of river...Throughout Peru , dolphins of both species are found widely feeding gray whales versus wide-ranging searches in these dimensions by In the main

The Deployed Warfighter Protection Research Program: Finding New Methods to Vanquish Old Foes (The United States Army Medical Department Journal, April-June 2008)

DTIC Science & Technology

2008-06-01

pyriproxyfen, the most powerful insect growth regulator (IGR), against dengue vector mosquitoes. In the Peruvian Amazon community at Iquitos, Stancil42 (Naval...Medical Research Center Detachment, Peru ) received a grant to optimize strategies for preventing the breeding of Aedes aegypti mosquitoes in...effort to prevent sand flies breeding in rodent burrows, the Genesis Company (Wellington, Colorado) won an award for producing insecticidal baits that

Sources and risk factors for lead exposure in indigenous children of the Peruvian Amazon, disentangling connections with oil activity.

PubMed

Anticona, Cynthia; Bergdahl, Ingvar A; San Sebastian, Miguel

2012-01-01

In the Corrientes river basin, Peruvian Amazon, lead exposure among indigenous communities was first reported in 2006. To address controversy regarding the main source of exposure, this study aimed to identify the sources and risk factors for lead exposure among children from the communities in question, and to clarify the potential relationship with oil activity. This cross-sectional study was conducted in six communities. Participants were children aged 0-17 years and their mothers. Data collection included blood lead levels (BLLs) and hemoglobin determination, a questionnaire on risk factors and environmental sampling. We used age-stratified multivariate regression models, with generalized estimating equation to account for correlation within households. Twenty-seven percent of the children had BLLs ≥10 μg/dl. Mother's BLLs ≥10 μg/dl, playing and chewing lead scraps, fishing ≥three times/week, and living in highly oil-exposed communities increased the risk of having BLLs ≥10 μg/dl. Lead concentrations in sediment, soil, dust, and fish samples were below reference values. Mother's BLLs ≥10 μg/dl, playing and chewing lead scraps to manufacture fishing sinkers were the most important risk factors for children's BLLs ≥10 μg/dl. The connection with oil activity appears to be through access to metal lead from the industry's wastes.

Compositional characterization of native Peruvian chili peppers (Capsicum spp.).

PubMed

Meckelmann, Sven W; Riegel, Dieter W; van Zonneveld, Maarten J; Ríos, Llermé; Peña, Karla; Ugas, Roberto; Quinonez, Lourdes; Mueller-Seitz, Erika; Petz, Michael

2013-03-13

The national Capsicum germplasm bank of Peru at INIA holds a unique collection of more than 700 Capsicum accessions, including many landraces. These conserved accessions have never been thoroughly characterized or evaluated. Another smaller collection exists at UNALM, and CIDRA provided taxonomically characterized fruits from the Amazon region of Ucayali. Of these collections, 147 accessions have been selected to represent the biodiversity of Peruvian Capsicum annuum , Capsicum baccatum , Capsicum chinense , and Capsicum frutescens by morphological traits as well as by agronomic characteristics and regional origin. All fruits from the selected accessions have been oven-dried and ground in Peru and analyzed in Germany. Results are reported for each accession by total capsaicinoids and capsaicinoid pattern, total polyphenol content, antioxidant capacity, specific flavonoids (quercetin, kaempferol, luteolin, apigenin), fat content, vitamin C, surface color, and extractable color. A wide variability in phytochemical composition and concentration levels was found.

The microeconomics of sexual exploitation of girls and young women in the Peruvian Amazon.

PubMed

Mujica, Jaris

2013-01-01

This paper examines the sexual exploitation of girls and young women as an increasing phenomenon within the extractive industries of wood, oil, minerals and gas in Peruvian Amazonia. The analysis focuses on the city of Pucallpa and the northern part of the Ucayali River and aims to identify the social and economic dynamics underpinning the commercial sexual exploitation of female children and teenagers around the main river port. The study describes the local operating mechanisms of bars and restaurants in the port, the demand for and perceptions of the sexual exploitation of children and teenagers, and the economic logic that it entails. Using a discourse analytic approach, it is argued that this is a business whose profitability is tied to the trade in alcoholic beverages and foods and which responds to a set of family connections and networks.

Time-Varying, Serotype-Specific Force of Infection of Dengue Virus

DTIC Science & Technology

2014-05-20

Barraquer I, et al. (2011) From re-emergence to hyperendemicity: The natural history of the dengue epidemic in Brazil . PLoS Negl Trop Dis 5(1):e935. 14...Negl Trop Dis 5(9):e1322. 22. Egger JR, et al. (2008) Reconstructing historical changes in the force of infection of dengue fever in Singapore...documented outbreak of dengue in the Peruvian amazon region . Bull Pan Am Health Organ 26(3):201–207. 26. Watts DM, et al. (1999) Failure of secondary

Descriptive Analysis and Strategic Options to Defeat Commodity-Based Threat Financing Methodologies Related to Gold

DTIC Science & Technology

2015-09-01

continue to occur in the Peruvian Andes and the low-lying Amazon basin in the environmentally sensitive and protected region of Madre de Dios . In 2013...PwC stated, “six mining companies and the small producers of the region of Madre de Dios concentrate 62% of [gold] production (PwC, 2013b, p. 16...illegal mining operations occur throughout Madre de Dios without attempts at formalization. In Madre de Dios , forests are clear cut of vegetation

When "health" is not enough: societal, individual and biomedical assessments of well-being among the Matsigenka of the Peruvian Amazon.

PubMed

Izquierdo, Carolina

2005-08-01

Although biomedical indicators of health status show that physical health for the Matsigenka of the Peruvian Amazon has significantly improved over the past 20-30 years, the Matsigenka perceive their health and well-being to have severely declined during this period. This discrepancy between empirical measures and local perceptions of health and well-being points to the central tension inherent in measuring and defining "health." While biomedical parameters of health are generally linked to notions of the body free of illness, measurable by physiological means, the Matsigenka define physical health as only one component of what it means to be healthy and to experience well-being. For the Matsigenka, notions of health and well-being are linked fundamentally to ideals about happiness, productivity and goodness, in addition to biomedical health. The Matsigenka attribute the decrease in their well-being to newly instigated sorcery and stressors resulting from outside influences and morality institutionalized by cultural "outsiders", such as missionaries, school teachers, health personnel, oil company employees and government officials. This article explores the relationships between biomedical, societal and personal assessments of health and well-being among the Matsigenka as they seek to preserve their sense of wellness in spite of their rapidly changing social and economic environment. By using longitudinal qualitative and quantitative ethnographic and health data, this paper shows that, for the Matsigenka, increases in acculturation and permanent settlement result in an alarming decrease in their health and well-being.

Assessment of an automated capillary system for Plasmodium vivax microsatellite genotyping.

PubMed

Manrique, Paulo; Hoshi, Mari; Fasabi, Manuel; Nolasco, Oscar; Yori, Pablo; Calderón, Martiza; Gilman, Robert H; Kosek, Margaret N; Vinetz, Joseph M; Gamboa, Dionicia

2015-08-21

Several platforms have been used to generate the primary data for microsatellite analysis of malaria parasite genotypes. Each has relative advantages but share a limitation of being time- and cost-intensive. A commercially available automated capillary gel cartridge system was assessed in the microsatellite analysis of Plasmodium vivax diversity in the Peruvian Amazon. The reproducibility and accuracy of a commercially-available automated capillary system, QIAxcel, was assessed using a sequenced PCR product of 227 base pairs. This product was measured 42 times, then 27 P. vivax samples from Peruvian Amazon subjects were analyzed with this instrument using five informative microsatellites. Results from the QIAxcel system were compared with a Sanger-type sequencing machine, the ABI PRISM(®) 3100 Genetic Analyzer. Significant differences were seen between the sequenced amplicons and the results from the QIAxcel instrument. Different runs, plates and cartridges yielded significantly different results. Additionally, allele size decreased with each run by 0.045, or 1 bp, every three plates. QIAxcel and ABI PRISM systems differed in giving different values than those obtained by ABI PRISM, and too many (i.e. inaccurate) alleles per locus were also seen with the automated instrument. While P. vivax diversity could generally be estimated using an automated capillary gel cartridge system, the data demonstrate that this system is not sufficiently precise for reliably identifying parasite strains via microsatellite analysis. This conclusion reached after systematic analysis was due both to inadequate precision and poor reproducibility in measuring PCR product size.

Evidence for Aedes aegypti (Diptera: Culicidae) Oviposition on Boats in the Peruvian Amazon.

PubMed

Guagliardo, Sarah Anne; Morrison, Amy C; Luis Barboza, Jose; Wesson, Dawn M; Ponnusamy, Loganathan; Astete, Helvio; Vazquez-Prokopec, Gonzalo; Kitron, Uriel

2015-07-01

Dengue vector Aedes aegypti L. is invading peri-urban and rural areas throughout Latin America. Our previous research in the Peruvian Amazon has shown that river boats are heavily infested with immature and adult Ae. aegypti mosquitoes, likely playing a major role in their long-distance dispersal and successful invasion. However, the presence of immature mosquitoes provides no information about the timing of oviposition, and whether it took place in the boats. Here, we used baited ovitraps deployed on river boats to test the hypothesis that Ae. aegypti oviposition occurs during boat travel. We deployed 360 ovitraps on 60 different barges during August and October of 2013, and February 2014 (with 20 barges sampled during each month). We found that Ae. aegypti mosquitoes in 22 individual ovitraps from 15 of the 60 barges (premise index 25%) across all sampling dates. Further, the distribution of Ae. aegypti egg abundance was highly aggregated: 2.6% of traps (N=7) were responsible for 71.8% of eggs found, and 1.5% of traps (N=4) were responsible for all (100%) of the larvae found. Similarly, 5% of boats were responsible for the 71.47% of eggs. Our results provide strong evidence that Ae. aegypti oviposition commonly occurs during boat travel. Baited ovitraps could represent a cost-effective means of monitoring and controlling mosquito populations on boats. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

¿Somos iguales? Using a structural violence framework to understand gender and health inequities from an intersectional perspective in the Peruvian Amazon.

PubMed

Shannon, Geordan D; Motta, Angelica; Cáceres, Carlos F; Skordis-Worrall, Jolene; Bowie, Diana; Prost, Audrey

In the Peruvian Amazon, historical events of colonization and political marginalization intersect with identities of ethnicity, class and geography in the construction of gender and health inequities. Gender-based inequalities can manifest in poor health outcomes via discriminatory practices, healthcare system imbalances, inequities in health research, and differential exposures and vulnerabilities to diseases. Structural violence is a comprehensive framework to explain the mechanisms by which social forces such as poverty, racism and gender inequity become embodied as individual experiences and health outcomes, and thus may be a useful tool in structuring an intersectional analysis of gender and health inequities in Amazonian Peru. The aim of this paper is to explore the intersection of gender inequities with other social inequalities in the production of health and disease in Peru's Amazon using a structural violence approach. Exploratory qualitative research was performed in two Loreto settings - urban Iquitos and the rural Lower Napo River region - between March and November 2015. This included participant observation with prolonged stays in the community, 46 semi-structured individual interviews and three group discussions. Thematic analysis was performed to identify emerging themes related to gender inequalities in health and healthcare and how these intersect with layered social disadvantages in the reproduction of health and illness. We employed a structural violence approach to construct an intersectional analysis of gender and health inequities in Amazonian Peru. Our findings were arranged into five interrelated domains within a gender, structural violence and health model: gender as a symbolic institution, systemic gender-based violence, interpersonal violence, the social determinants of health, and other health outcomes. Each domain represents one aspect of the complex associations between gender, gender inequity and health. Through this model, we were able to explore: gender, health and intersectionality; structural violence; and to highlight particular local gender and health dynamics. Intersecting influences of poverty, ethnicity, geography and gender served as significant barriers to healthcare in both rural and urban settings.

Projected increases in the annual flood pulse of the Western Amazon

NASA Astrophysics Data System (ADS)

Zulkafli, Zed; Buytaert, Wouter; Manz, Bastian; Véliz Rosas, Claudia; Willems, Patrick; Lavado-Casimiro, Waldo; Guyot, Jean-Loup; Santini, William

2016-01-01

The impact of a changing climate on the Amazon basin is a subject of intensive research because of its rich biodiversity and the significant role of rainforests in carbon cycling. Climate change has also a direct hydrological impact, and increasing efforts have focused on understanding the hydrological dynamics at continental and subregional scales, such as the Western Amazon. New projections from the Coupled Model Inter-comparison Project Phase 5 ensemble indicate consistent climatic warming and increasing seasonality of precipitation in the Peruvian Amazon basin. Here we use a distributed land surface model to quantify the potential impact of this change in the climate on the hydrological regime of the upper Amazon river. Using extreme value analysis, historical and future projections of the annual minimum, mean, and maximum river flows are produced for a range of return periods between 1 and 100 yr. We show that the RCP 4.5 and 8.5 scenarios of climate change project an increased severity of the wet season flood pulse (7.5% and 12% increases respectively for the 100 yr return floods). These findings agree with previously projected increases in high extremes under the Special Report on Emissions Scenarios climate projections, and are important to highlight due to the potential consequences on reproductive processes of in-stream species, swamp forest ecology, and socio-economy in the floodplain, amidst a growing literature that more strongly emphasises future droughts and their impact on the viability of the rainforest system over greater Amazonia.

Land Use Change Driven by Gold Mining; Peruvian Amazon

NASA Astrophysics Data System (ADS)

Swenson, J. J.; Carter, C. E.; domec, J.; Delgado, C. I.

2011-12-01

Many factors such as poverty, ineffective institutions and environmental regulations may prevent developing countries from managing how natural resources are extracted to meet a strong market demand. Extraction for some resources has reached such proportions that evidence is measurable from space. We present recent evidence of the global demand for a single commodity and the ecosystem destruction resulting from commodity extraction, recorded by satellites for one of the most biodiverse areas of the world. We find that since 2003, recent mining deforestation in Madre de Dios, Peru is increasing nonlinearly alongside a constant annual rate of increase in international gold price (~18%/yr). We detect that the new pattern of mining deforestation (1915 ha/year, 2006-2009) is outpacing that of nearby settlement deforestation. We show that gold price is linked with exponential increases in Peruvian national mercury imports over time (R2 = 0.93, p = 0.04, 2003- 2009). Given the past rates of increase we predict that mercury imports may more than double for 2011 (~500 t/year). Virtually all of Peru's mercury imports are used in artisanal gold mining. Much of the mining increase is unregulated/ artisanal in nature, lacking environmental impact analysis or miner education. As a result, large quantities of mercury are being released into the atmosphere, sediments and waterways. Other developing countries endowed with gold deposits are likely experiencing similar environmental destruction in response to recent record high gold prices. The increasing availability of satellite imagery ought to evoke further studies linking economic variables with land use and cover changes on the ground.

Anti-Plasmodium falciparum invasion ligand antibodies in a low malaria transmission region, Loreto, Peru

PubMed Central

2012-01-01

Background Erythrocyte invasion by Plasmodium falciparum is a complex process that involves two families; Erythrocyte Binding-Like (EBL) and the Reticulocyte Binding-Like (PfRh) proteins. Antibodies that inhibit merozoite attachment and invasion are believed to be important in mediating naturally acquired immunity and immunity generated by parasite blood stage vaccine candidates. The hypotheses tested in this study were 1) that antibody responses against specific P. falciparum invasion ligands (EBL and PfRh) differ between symptomatic and asymptomatic individuals living in the low-transmission region of the Peruvian Amazon and 2), such antibody responses might have an association, either direct or indirect, with clinical immunity observed in asymptomatically parasitaemic individuals. Methods ELISA was used to assess antibody responses (IgG, IgG1 and IgG3) against recombinant P. falciparum invasion ligands of the EBL (EBA-175, EBA-181, EBA-140) and PfRh families (PfRh1, PfRh2a, PfRh2b, PfRh4 and PfRh5) in 45 individuals infected with P. falciparum from Peruvian Amazon. Individuals were classified as having symptomatic malaria (N=37) or asymptomatic infection (N=8). Results Antibody responses against both EBL and PfRh family proteins were significantly higher in asymptomatic compared to symptomatic individuals, demonstrating an association with clinical immunity. Significant differences in the total IgG responses were observed with EBA-175, EBA-181, PfRh2b, and MSP119 (as a control). IgG1 responses against EBA-181, PfRh2a and PfRh2b were significantly higher in the asymptomatic individuals. Total IgG antibody responses against PfRh1, PfRh2a, PfRh2b, PfRh5, EBA-175, EBA-181 and MSP119 proteins were negatively correlated with level of parasitaemia. IgG1 responses against EBA-181, PfRh2a and PfRh2b and IgG3 response for PfRh2a were also negatively correlated with parasitaemia. Conclusions These data suggest that falciparum malaria patients who develop clinical immunity (asymptomatic parasitaemia) in a low transmission setting such as the Peruvian Amazon have antibody responses to defined P. falciparum invasion ligand proteins higher than those found in symptomatic (non-immune) patients. While these findings will have to be confirmed by larger studies, these results are consistent with a potential role for one or more of these invasion ligands as a component of an anti-P. falciparum vaccine in low-transmission malaria-endemic regions. PMID:23110555

First evidences of Amazonian wildlife feeding on petroleum-contaminated soils: A new exposure route to petrogenic compounds?

PubMed

Orta-Martínez, Martí; Rosell-Melé, Antoni; Cartró-Sabaté, Mar; O'Callaghan-Gordo, Cristina; Moraleda-Cibrián, Núria; Mayor, Pedro

2018-01-01

Videos recorded with infrared camera traps placed in petroleum contaminated areas of the Peruvian Amazon have shown that four wildlife species, the most important for indigenous peoples' diet (lowland tapir, paca, red-brocket deer and collared peccary), consume oil-contaminated soils and water. Further research is needed to clarify whether Amazonian wildlife's geophagy can be a route of exposure to petrogenic contamination for populations living in the vicinity of oil extraction areas and relying on subsistence hunting. Copyright © 2017 Elsevier Inc. All rights reserved.

Late Pleistocene equilibrium-line reconstructions in the northern Peruvian Andes

USGS Publications Warehouse

Rodbell, D.T.

1992-01-01

ELA reconstructions using the toe-to-headwall-altitude ratio method for paleoglaciers in the Cordilleras Blanca and Oriental, northern Peruvian Andes indicate that ELAs during the last glacial maximum (LGM; marine isotope stage 2)) were c.4300 m in the Cordillera Blanca, c.3900-3600 m on the west side of the Cordillera Oriental, and c.3200 m on the east (Amazon Basin) side of the Cordillera Oriental. Comparison with estimated modern ELAs and glaciation thresholds indicate that ELA depression ranged from c.700 m in the Cordillera Blanca to c.1200 m on the east side of the Cordillera Oriental. Palynological evidence for drier conditions during the LGM in the tropical Andes suggests that ELA depression of this amount involved a temperature reduction (>5-6??C) that greatly exceeded the tropical sea-surface temperature depression estimates of CLIMAP (<2??C). The west to east increase in ELA depression during the LGM indicates that the steep modern precipitation gradients may have been even steeper during the LGM. -from Author

Interculturality and Intercultural Education: A Challenge for Democracy

NASA Astrophysics Data System (ADS)

Aikman, Sheila

1997-09-01

The paper examines the debate taking place in Peru, and also more generally in South and Central American countries with large indigenous populations, on the nature of interculturality and intercultural education. It investigates concepts fundamental to interculturality such as democracy and equality and asks what they mean in the context of the Peruvian state, civil society and the indigenous movement. It questions whether an interculturality based in apolitical calls for dialogue and respect for cultural and linguistic plurality can meet the needs of indigenous peoples and their daily confrontations with oppressive and unequal intercultural relations. Taking Peru as an example, it investigates the possibilities for the development of an interculturality that is characterised by equality and participation and which enables indigenous peoples to have greater control over their lives. It then briefly examines the nature of the intercultural lives of the Harakmbut of SE Peruvian Amazon and a new indigenous intercultural education programme which the Harakmbut hope will help them address the inequalities and exploitation which they face.

[High blood pressure and obesity in indigenous Ashaninkas of Junin region, Peru].

PubMed

Romero, Candice; Zavaleta, Carol; Cabrera, Lilia; Gilman, Robert H; Miranda, J Jaime

2014-01-01

In order to determine the prevalence of high blood pressure and obesity in indigenous Ashaninkas, with limited contact with Western culture, a cross-sectional study was conducted in 2008 in five Ashaninka communities of the Junin region in the jungle of Peru. Individuals aged 35 or older were included. 76 subjects were evaluated (average age 47.4 years old, 52.6 % women) corresponding to 43.2% of the eligible population. The prevalence of hypertension was 14.5% (CI 95%: 6.4-22.6) and the prevalence of obesity, according to body mass index, was 4% (CI 95%: 0-8.4). No differences were observed in gender or in blood pressure levels by age group. Compared with previous studies in non-indigenous people of the Peruvian jungle, the prevalence of high blood pressure was higher while the prevalence of obesity was lower. Our findings are a call to be aware of the situation of chronic non-communicable diseases in indigenous populations in the Peruvian Amazon.

Linking national agrarian policy to deforestation in the Peruvian Amazon: a case study of Tambopata, 1986-1997.

PubMed

Alvarez, Nora L; Naughton-Treves, Lisa

2003-06-01

Amazonian deforestation rates vary regionally, and ebb and flow according to macroeconomic policy and local social factors. We used remote sensing and field interviews to investigate deforestation patterns and drivers at a Peruvian frontier during 1986-1991, when rural credit and guaranteed markets were available; and 1991-1997, when structural adjustment measures were imposed. The highest rate of clearing (1.5% gross) was observed along roads during 1986-1991. Roadside deforestation slowed in 1991-1997 (0.7% gross) and extensive regrowth yielded a net increase in forest cover (0.5%). Deforestation along rivers was relatively constant. Riverside farms today retain more land in both crops and forest than do roadside farms where pasture and successional growth predominate. Long-term residents maintain more forest on their farms than do recent colonists, but proximity to urban markets is the strongest predictor of forest cover. Future credit programs must reflect spatial patterns of development and ecological vulnerability, and support the recuperation of fallow lands and secondary forest.

Population genetic structure of traditional populations in the Peruvian Central Andes and implications for South American population history.

PubMed

Cabana, Graciela S; Lewis, Cecil M; Tito, Raúl Y; Covey, R Alan; Cáceres, Angela M; Cruz, Augusto F De La; Durand, Diana; Housman, Genevieve; Hulsey, Brannon I; Iannacone, Gian Carlo; López, Paul W; Martínez, Rolando; Medina, Ángel; Dávila, Olimpio Ortega; Pinto, Karla Paloma Osorio; Santillán, Susan I Polo; Domínguez, Percy Rojas; Rubel, Meagan; Smith, Heather F; Smith, Silvia E; Massa, Verónica Rubín de Celis; Lizárraga, Beatriz; Stone, Anne C

2014-01-01

Molecular-based characterizations of Andean peoples are traditionally conducted in the service of elucidating continent-level evolutionary processes in South America. Consequently, genetic variation among "western" Andean populations is often represented in relation to variation among "eastern" Amazon and Orinoco River Basin populations. This west-east contrast in patterns of population genetic variation is typically attributed to large-scale phenomena, such as dual founder colonization events or differing long-term microevolutionary histories. However, alternative explanations that consider the nature and causes of population genetic diversity within the Andean region remain underexplored. Here we examine population genetic diversity in the Peruvian Central Andes using data from the mtDNA first hypervariable region and Y-chromosome short tandem repeats among 17 newly sampled populations and 15 published samples. Using this geographically comprehensive data set, we first reassessed the currently accepted pattern of western versus eastern population genetic structure, which our results ultimately reject: mtDNA population diversities were lower, rather than higher, within Andean versus eastern populations, and only highland Y-chromosomes exhibited significantly higher within-population diversities compared with eastern groups. Multiple populations, including several highland samples, exhibited low genetic diversities for both genetic systems. Second, we explored whether the implementation of Inca state and Spanish colonial policies starting at about ad 1400 could have substantially restructured population genetic variation and consequently constitute a primary explanation for the extant pattern of population diversity in the Peruvian Central Andes. Our results suggest that Peruvian Central Andean population structure cannot be parsimoniously explained as the sole outcome of combined Inca and Spanish policies on the region's population demography: highland populations differed from coastal and lowland populations in mtDNA genetic structure only; highland groups also showed strong evidence of female-biased gene flow and/or effective sizes relative to other Peruvian ecozones. Taken together, these findings indicate that population genetic structure in the Peruvian Central Andes is considerably more complex than previously reported and that characterizations of and explanations for genetic variation may be best pursued within more localized regions and defined time periods.

Effects of a post-deworming health hygiene education intervention on absenteeism in school-age children of the Peruvian Amazon.

PubMed

Thériault, François L; Maheu-Giroux, Mathieu; Blouin, Brittany; Casapía, Martin; Gyorkos, Theresa W

2014-08-01

Soil-transmitted helminth (STH) infections are a leading cause of disability and disease burden in school-age children of worm-endemic regions. Their effect on school absenteeism, however, remains unclear. The World Health Organization currently recommends delivering mass deworming and health hygiene education through school-based programs, in an effort to control STH-related morbidity. In this cluster-RCT, the impact of a health hygiene education intervention on absenteeism was measured. From April to June 2010, all Grade 5 students at 18 schools in a worm-endemic region of the Peruvian Amazon were dewormed. Immediately following deworming, nine schools were randomly assigned to the intervention arm of the trial using a matched-pair design. The Grade 5 students attending intervention schools (N = 517) received four months of health hygiene education aimed at increasing knowledge of STH prevention. Grade 5 students from the other nine schools (N = 571) served as controls. Absenteeism was measured daily through teachers' attendance logs. After four months of follow-up, overall absenteeism rates at intervention and control schools were not statistically significantly different. However, post-trial non-randomized analyses have shown that students with moderate-to-heavy Ascaris infections and light hookworm infections four months after deworming had, respectively, missed 2.4% (95% CI: 0.1%, 4.7%) and 4.6% (95% CI: 1.9%, 7.4%) more schooldays during the follow-up period than their uninfected counterparts. These results provide empirical evidence of a direct effect of STH infections on absenteeism in school-age children.

Effects of a Post-Deworming Health Hygiene Education Intervention on Absenteeism in School-Age Children of the Peruvian Amazon

PubMed Central

Thériault, François L.; Maheu-Giroux, Mathieu; Blouin, Brittany; Casapía, Martin; Gyorkos, Theresa W.

2014-01-01

Soil-transmitted helminth (STH) infections are a leading cause of disability and disease burden in school-age children of worm-endemic regions. Their effect on school absenteeism, however, remains unclear. The World Health Organization currently recommends delivering mass deworming and health hygiene education through school-based programs, in an effort to control STH-related morbidity. In this cluster-RCT, the impact of a health hygiene education intervention on absenteeism was measured. From April to June 2010, all Grade 5 students at 18 schools in a worm-endemic region of the Peruvian Amazon were dewormed. Immediately following deworming, nine schools were randomly assigned to the intervention arm of the trial using a matched-pair design. The Grade 5 students attending intervention schools (N = 517) received four months of health hygiene education aimed at increasing knowledge of STH prevention. Grade 5 students from the other nine schools (N = 571) served as controls. Absenteeism was measured daily through teachers' attendance logs. After four months of follow-up, overall absenteeism rates at intervention and control schools were not statistically significantly different. However, post-trial non-randomized analyses have shown that students with moderate-to-heavy Ascaris infections and light hookworm infections four months after deworming had, respectively, missed 2.4% (95% CI: 0.1%, 4.7%) and 4.6% (95% CI: 1.9%, 7.4%) more schooldays during the follow-up period than their uninfected counterparts. These results provide empirical evidence of a direct effect of STH infections on absenteeism in school-age children. PMID:25122469

Conservation Beyond Park Boundaries: The Impact of Buffer Zones on Deforestation and Mining Concessions in the Peruvian Amazon.

PubMed

Weisse, Mikaela J; Naughton-Treves, Lisa C

2016-08-01

Many researchers have tested whether protected areas save tropical forest, but generally focus on parks and reserves, management units that have internationally recognized standing and clear objectives. Buffer zones have received considerably less attention because of their ambiguous rules and often informal status. Although buffer zones are frequently dismissed as ineffective, they warrant attention given the need for landscape-level approaches to conservation and their prevalence around the world-in Peru, buffer zones cover >10 % of the country. This study examines the effectiveness of buffer zones in the Peruvian Amazon to (a) prevent deforestation and (b) limit the extent of mining concessions. We employ covariate matching to determine the impact of 13 buffer zones on deforestation and mining concessions from 2007 to 2012. Despite variation between sites, these 13 buffer zones have prevented ~320 km(2) of forest loss within their borders during the study period and ~1739 km(2) of mining concessions, an outcome associated with the special approval process for granting formal concessions in these areas. However, a closer look at the buffer zone around the Tambopata National Reserve reveals the difficulties of controlling illegal and informal activities. According to interviews with NGO employees, government officials, and community leaders, enforcement of conservation is limited by uncertain institutional responsibilities, inadequate budgets, and corruption, although formal and community-based efforts to block illicit mining are on the rise. Landscape-level conservation not only requires clear legal protocol for addressing large-scale, formal extractive activities, but there must also be strategies and coordination to combat illegal activities.

Birds of Two Oceans? Trans-Andean and Divergent Migration of Black Skimmers (Rynchops niger cinerascens) from the Peruvian Amazon

PubMed Central

Davenport, Lisa C.

2016-01-01

Seasonal flooding compels some birds that breed in aquatic habitats in Amazonia to undertake annual migrations, yet we know little about how the complex landscape of the Amazon region is used seasonally by these species. The possibility of trans-Andes migration for Amazonian breeding birds has largely been discounted given the high geographic barrier posed by the Andean Cordillera and the desert habitat along much of the Pacific Coast. Here we demonstrate a trans-Andes route for Black Skimmers (Rynchops niger cinerascens) breeding on the Manu River (in the lowlands of Manu National Park, Perú), as well as divergent movement patterns both regionally and across the continent. Of eight skimmers tracked with satellite telemetry, three provided data on their outbound migrations, with two crossing the high Peruvian Andes to the Pacific. A third traveled over 1800 km to the southeast before transmissions ended in eastern Paraguay. One of the two trans-Andean migrants demonstrated a full round-trip migration back to its tagging location after traveling down the Pacific Coast from latitude 9° South to latitude 37° S, spending the austral summer in the Gulf of Arauco, Chile. This is the first documentation of a trans-Andes migration observed for any bird breeding in lowland Amazonia. To our knowledge, this research also documents the first example of a tropical-breeding waterbird migrating out of the tropics to spend the non-breeding season in the temperate summer, this being the reverse pattern with respect to seasonality for austral migrants in general. PMID:26760301

Unstable Malaria Transmission in the Southern Peruvian Amazon and Its Association with Gold Mining, Madre de Dios, 2001-2012.

PubMed

Sanchez, Juan F; Carnero, Andres M; Rivera, Esteban; Rosales, Luis A; Baldeviano, G Christian; Asencios, Jorge L; Edgel, Kimberly A; Vinetz, Joseph M; Lescano, Andres G

2017-02-08

The reemergence of malaria in the last decade in Madre de Dios, southern Peruvian Amazon basin, was accompanied by ecological, political, and socioeconomic changes related to the proliferation of illegal gold mining. We conducted a secondary analysis of passive malaria surveillance data reported by the health networks in Madre de Dios between 2001 and 2012. We calculated the number of cases of malaria by year, geographic location, intensity of illegal mining activities, and proximity of health facilities to the Peru-Brazil Interoceanic Highway. During 2001-2012, 203,773 febrile cases were identified in Madre de Dios, of which 30,811 (15.1%) were confirmed cases of malaria; all but 10 cases were due to Plasmodium vivax Cases of malaria rose rapidly between 2004 and 2007, reached 4,469 cases in 2005, and then declined after 2010 to pre-2004 levels. Health facilities located in areas of intense illegal gold mining reported 30-fold more cases than those in non-mining areas (ratio = 31.54, 95% confidence interval [CI] = 19.28, 51.60). Finally, health facilities located > 1 km from the Interoceanic Highway reported significantly more cases than health facilities within this distance (ratio = 16.20, 95% CI = 8.25, 31.80). Transmission of malaria in Madre de Dios is unstable, geographically heterogeneous, and strongly associated with illegal gold mining. These findings highlight the importance of spatially oriented interventions to control malaria in Madre de Dios, as well as the need for research on malaria transmission in illegal gold mining camps. © The American Society of Tropical Medicine and Hygiene.

Mercury concentrations in bats (Chiroptera) from a gold mining area in the Peruvian Amazon.

PubMed

Moreno-Brush, Mónica; Portillo, Alejandro; Brändel, Stefan Dominik; Storch, Ilse; Tschapka, Marco; Biester, Harald

2018-01-01

In the southeastern Peruvian Amazon, artisanal and small-scale gold mining (ASGM) is estimated to have released up to 300 tonnes of mercury (Hg) to the environment between 1995 and 2007 alone, and is claimed to be responsible for Hg concentrations above international thresholds for aquatic wildlife species. Here, we examined whether Hg concentrations in bat populations are potentially related to regional ASGM-Hg releases. We determined Hg concentrations in the fur of bats collected at three different distances from the major ASGM areas in Peru. Our findings from 204 individuals of 32 species indicate that Hg concentrations in bat fur mainly resulted from differences in feeding habits, because Hg concentrations were significantly higher in omnivorous bats than in frugivorous bats. At least in two species, populations living in ASGM-affected sites harbored higher Hg concentrations than did populations in unaffected sites. Because Hg concentrations reflect Hg dietary exposure, Hg emissions from amalgam roasting sites appear to deposit locally and enter the terrestrial food web. Although our study demonstrates that ASGM activities (and Hg point sources) increase Hg exposure in wildlife, the overall Hg concentrations reported here are relatively low. The measured Hg concentrations were below the toxicity threshold at which adverse neurological effects have been reported in rodents and mink (>10 µg g -1 ), and were in the range of Hg concentrations in the fur of bats from nonpoint source affected sites in other latitudes. This study emphasizes the importance of considering feeding habits when evaluating Hg concentrations in bats and other vertebrates.

Conservation Beyond Park Boundaries: The Impact of Buffer Zones on Deforestation and Mining Concessions in the Peruvian Amazon

NASA Astrophysics Data System (ADS)

Weisse, Mikaela J.; Naughton-Treves, Lisa C.

2016-08-01

Many researchers have tested whether protected areas save tropical forest, but generally focus on parks and reserves, management units that have internationally recognized standing and clear objectives. Buffer zones have received considerably less attention because of their ambiguous rules and often informal status. Although buffer zones are frequently dismissed as ineffective, they warrant attention given the need for landscape-level approaches to conservation and their prevalence around the world—in Peru, buffer zones cover >10 % of the country. This study examines the effectiveness of buffer zones in the Peruvian Amazon to (a) prevent deforestation and (b) limit the extent of mining concessions. We employ covariate matching to determine the impact of 13 buffer zones on deforestation and mining concessions from 2007 to 2012. Despite variation between sites, these 13 buffer zones have prevented ~320 km2 of forest loss within their borders during the study period and ~1739 km2 of mining concessions, an outcome associated with the special approval process for granting formal concessions in these areas. However, a closer look at the buffer zone around the Tambopata National Reserve reveals the difficulties of controlling illegal and informal activities. According to interviews with NGO employees, government officials, and community leaders, enforcement of conservation is limited by uncertain institutional responsibilities, inadequate budgets, and corruption, although formal and community-based efforts to block illicit mining are on the rise. Landscape-level conservation not only requires clear legal protocol for addressing large-scale, formal extractive activities, but there must also be strategies and coordination to combat illegal activities.

Unstable Malaria Transmission in the Southern Peruvian Amazon and Its Association with Gold Mining, Madre de Dios, 2001–2012

PubMed Central

Sanchez, Juan F.; Carnero, Andres M.; Rivera, Esteban; Rosales, Luis A.; Baldeviano, G. Christian; Asencios, Jorge L.; Edgel, Kimberly A.; Vinetz, Joseph M.; Lescano, Andres G.

2017-01-01

The reemergence of malaria in the last decade in Madre de Dios, southern Peruvian Amazon basin, was accompanied by ecological, political, and socioeconomic changes related to the proliferation of illegal gold mining. We conducted a secondary analysis of passive malaria surveillance data reported by the health networks in Madre de Dios between 2001 and 2012. We calculated the number of cases of malaria by year, geographic location, intensity of illegal mining activities, and proximity of health facilities to the Peru–Brazil Interoceanic Highway. During 2001–2012, 203,773 febrile cases were identified in Madre de Dios, of which 30,811 (15.1%) were confirmed cases of malaria; all but 10 cases were due to Plasmodium vivax. Cases of malaria rose rapidly between 2004 and 2007, reached 4,469 cases in 2005, and then declined after 2010 to pre-2004 levels. Health facilities located in areas of intense illegal gold mining reported 30-fold more cases than those in non-mining areas (ratio = 31.54, 95% confidence interval [CI] = 19.28, 51.60). Finally, health facilities located > 1 km from the Interoceanic Highway reported significantly more cases than health facilities within this distance (ratio = 16.20, 95% CI = 8.25, 31.80). Transmission of malaria in Madre de Dios is unstable, geographically heterogeneous, and strongly associated with illegal gold mining. These findings highlight the importance of spatially oriented interventions to control malaria in Madre de Dios, as well as the need for research on malaria transmission in illegal gold mining camps. PMID:27879461

DIVERSITY OF BAT-ASSOCIATED LEPTOSPIRA IN THE PERUVIAN AMAZON INFERRED BY BAYESIAN PHYLOGENETIC ANALYSIS OF 16S RIBOSOMAL DNA SEQUENCES

PubMed Central

MATTHIAS, MICHAEL A.; DÍAZ, M. MÓNICA; CAMPOS, KALINA J.; CALDERON, MARITZA; WILLIG, MICHAEL R.; PACHECO, VICTOR; GOTUZZO, EDUARDO; GILMAN, ROBERT H.; VINETZ, JOSEPH M.

2008-01-01

The role of bats as potential sources of transmission to humans or as maintenance hosts of leptospires is poorly understood. We quantified the prevalence of leptospiral colonization in bats in the Peruvian Amazon in the vicinity of Iquitos, an area of high biologic diversity. Of 589 analyzed bats, culture (3 of 589) and molecular evidence (20 of 589) of leptospiral colonization was found in the kidneys, yielding an overall colonization rate of 3.4%. Infection rates differed with habitat and location, and among different bat species. Bayesian analysis was used to infer phylogenic relationships of leptospiral 16S ribosomal DNA sequences. Tree topologies were consistent with groupings based on DNA-DNA hybridization studies. A diverse group of leptospires was found in peri-Iquitos bat populations including Leptospira interrogans (5 clones), L. kirschneri (1), L. borgpetersenii (4), L. fainei (1), and two previously undescribed leptospiral species (8). Although L. kirschenri and L. interrogans have been previously isolated from bats, this report is the first to describe L. borgpetersenii and L. fainei infection of bats. A wild animal reservoir of L. fainei has not been previously described. The detection in bats of the L. interrogans serovar Icterohemorrhagiae, a leptospire typically maintained by peridomestic rats, suggests a rodent-bat infection cycle. Bats in Iquitos maintain a genetically diverse group of leptospires. These results provide a solid basis for pursuing molecular epidemiologic studies of bat-associated Leptospira, a potentially new epidemiologic reservoir of transmission of leptospirosis to humans. PMID:16282313

Birds of Two Oceans? Trans-Andean and Divergent Migration of Black Skimmers (Rynchops niger cinerascens) from the Peruvian Amazon.

PubMed

Davenport, Lisa C; Goodenough, Katharine S; Haugaasen, Torbjørn

2016-01-01

Seasonal flooding compels some birds that breed in aquatic habitats in Amazonia to undertake annual migrations, yet we know little about how the complex landscape of the Amazon region is used seasonally by these species. The possibility of trans-Andes migration for Amazonian breeding birds has largely been discounted given the high geographic barrier posed by the Andean Cordillera and the desert habitat along much of the Pacific Coast. Here we demonstrate a trans-Andes route for Black Skimmers (Rynchops niger cinerascens) breeding on the Manu River (in the lowlands of Manu National Park, Perú), as well as divergent movement patterns both regionally and across the continent. Of eight skimmers tracked with satellite telemetry, three provided data on their outbound migrations, with two crossing the high Peruvian Andes to the Pacific. A third traveled over 1800 km to the southeast before transmissions ended in eastern Paraguay. One of the two trans-Andean migrants demonstrated a full round-trip migration back to its tagging location after traveling down the Pacific Coast from latitude 9° South to latitude 37° S, spending the austral summer in the Gulf of Arauco, Chile. This is the first documentation of a trans-Andes migration observed for any bird breeding in lowland Amazonia. To our knowledge, this research also documents the first example of a tropical-breeding waterbird migrating out of the tropics to spend the non-breeding season in the temperate summer, this being the reverse pattern with respect to seasonality for austral migrants in general.

Annual Carbon Emissions from Deforestation in the Amazon Basin between 2000 and 2010.

PubMed

Song, Xiao-Peng; Huang, Chengquan; Saatchi, Sassan S; Hansen, Matthew C; Townshend, John R

2015-01-01

Reducing emissions from deforestation and forest degradation (REDD+) is considered one of the most cost-effective strategies for mitigating climate change. However, historical deforestation and emission rates-critical inputs for setting reference emission levels for REDD+-are poorly understood. Here we use multi-source, time-series satellite data to quantify carbon emissions from deforestation in the Amazon basin on a year-to-year basis between 2000 and 2010. We first derive annual deforestation indicators by using the Moderate Resolution Imaging Spectroradiometer Vegetation Continuous Fields (MODIS VCF) product. MODIS indicators are calibrated by using a large sample of Landsat data to generate accurate deforestation rates, which are subsequently combined with a spatially explicit biomass dataset to calculate committed annual carbon emissions. Across the study area, the average deforestation and associated carbon emissions were estimated to be 1.59 ± 0.25 M ha•yr(-1) and 0.18 ± 0.07 Pg C•yr(-1) respectively, with substantially different trends and inter-annual variability in different regions. Deforestation in the Brazilian Amazon increased between 2001 and 2004 and declined substantially afterwards, whereas deforestation in the Bolivian Amazon, the Colombian Amazon, and the Peruvian Amazon increased over the study period. The average carbon density of lost forests after 2005 was 130 Mg C•ha(-1), ~11% lower than the average carbon density of remaining forests in year 2010 (144 Mg C•ha(-1)). Moreover, the average carbon density of cleared forests increased at a rate of 7 Mg C•ha(-1)•yr(-1) from 2005 to 2010, suggesting that deforestation has been progressively encroaching into high-biomass lands in the Amazon basin. Spatially explicit, annual deforestation and emission estimates like the ones derived in this study are useful for setting baselines for REDD+ and other emission mitigation programs, and for evaluating the performance of such efforts.

Annual Carbon Emissions from Deforestation in the Amazon Basin between 2000 and 2010

PubMed Central

Song, Xiao-Peng; Huang, Chengquan; Saatchi, Sassan S.; Hansen, Matthew C.; Townshend, John R.

2015-01-01

Reducing emissions from deforestation and forest degradation (REDD+) is considered one of the most cost-effective strategies for mitigating climate change. However, historical deforestation and emission rates―critical inputs for setting reference emission levels for REDD+―are poorly understood. Here we use multi-source, time-series satellite data to quantify carbon emissions from deforestation in the Amazon basin on a year-to-year basis between 2000 and 2010. We first derive annual deforestation indicators by using the Moderate Resolution Imaging Spectroradiometer Vegetation Continuous Fields (MODIS VCF) product. MODIS indicators are calibrated by using a large sample of Landsat data to generate accurate deforestation rates, which are subsequently combined with a spatially explicit biomass dataset to calculate committed annual carbon emissions. Across the study area, the average deforestation and associated carbon emissions were estimated to be 1.59 ± 0.25 M ha•yr−1 and 0.18 ± 0.07 Pg C•yr−1 respectively, with substantially different trends and inter-annual variability in different regions. Deforestation in the Brazilian Amazon increased between 2001 and 2004 and declined substantially afterwards, whereas deforestation in the Bolivian Amazon, the Colombian Amazon, and the Peruvian Amazon increased over the study period. The average carbon density of lost forests after 2005 was 130 Mg C•ha−1, ~11% lower than the average carbon density of remaining forests in year 2010 (144 Mg C•ha−1). Moreover, the average carbon density of cleared forests increased at a rate of 7 Mg C•ha−1•yr−1 from 2005 to 2010, suggesting that deforestation has been progressively encroaching into high-biomass lands in the Amazon basin. Spatially explicit, annual deforestation and emission estimates like the ones derived in this study are useful for setting baselines for REDD+ and other emission mitigation programs, and for evaluating the performance of such efforts. PMID:25951328

[Primary sclerosing cholangitis associated with Sjögren's syndrome, retroperitoneal fibrosis and chronic pancreatitis. Report of a case].

PubMed

Barreda, F; Contardo, C; León, A; Navarrete, J; Figueroa, R; Attanasio, F

1989-01-01

Primary Sclerosing Cholangitis (PSC) is an unusual chronic, cholestatic disease of unknown etiology, more frequently seen in young adults in close relationship with Chronic Ulcerative Colitis. We report the case of a 30 year old woman, coming from the peruvian amazon with PSC associated with Sjögren Syndrome, Chronic Pancreatitis and Retroperitoneal Fibrosis, without colonic involvement. She was treated with external biliary drainage and controlled for 12 months. In this paper, clinical, biochemical, radiological, histological and therapeutic features are reviewed as well as its possible immunologie autoimmune origin.

Micro-heterogeneity of malaria transmission in the Peruvian Amazon: a baseline assessment underlying a population-based cohort study.

PubMed

Rosas-Aguirre, Angel; Guzman-Guzman, Mitchel; Gamboa, Dionicia; Chuquiyauri, Raul; Ramirez, Roberson; Manrique, Paulo; Carrasco-Escobar, Gabriel; Puemape, Carmen; Llanos-Cuentas, Alejandro; Vinetz, Joseph M

2017-08-04

Understanding the dynamics of malaria transmission in diverse endemic settings is key for designing and implementing locally adapted and sustainable control and elimination strategies. A parasitological and epidemiological survey was conducted in September-October 2012, as a baseline underlying a 3-year population-based longitudinal cohort study. The aim was to characterize malaria transmission patterns in two contrasting ecological rural sites in the Peruvian Amazon, Lupuna (LUP), a riverine environment, and Cahuide (CAH), associated with road-linked deforestation. After a full population census, 1941 individuals 3 years and older (829 in LUP, 1112 in CAH) were interviewed, clinically examined and had a blood sample taken for the detection of malaria parasites by microscopy and PCR. Species-specific parasite prevalence was estimated overall and by site. Multivariate logistic regression models assessed risk factors for parasite infection by PCR, while SaTScan detected spatial clusters of PCR-positive individuals within each site. In addition, data from routine malaria surveillance in the period 2009-2012 were obtained. Parasite prevalence by PCR was higher in CAH than in LUP for Plasmodium vivax (6.2% vs. 3.9%) and for Plasmodium falciparum (2.6% vs. 1.2%). Among PCR-confirmed infections, asymptomatic (Asy) parasite carriers were always more common than symptomatic (Sy) infections for P. vivax (Asy/Sy ratio: 2/1 in LUP and 3.7/1 in CAH) and for P. falciparum (Asy/Sy ratio: 1.3/1 in LUP and 4/1 in CAH). Sub-patent (Spat) infections also predominated over patent (Pat) infections for both species: P. vivax (Spat/Pat ratio: 2.8/1 in LUP and 3.7/1 in CAH) and P. falciparum malaria (Spat/Pat ratio: 1.9/1 in LUP and 26/0 in CAH). For CAH, age, gender and living in a household without electricity were significantly associated with P. vivax infection, while only age and living in a household with electricity was associated with P. falciparum infection. For LUP, only household overcrowding was associated with P. falciparum infection. The spatial analysis only identified well-defined clusters of P. vivax and P. falciparum infected individuals in CAH. Reported malaria incidence indicated that malaria transmission has long occurred in LUP with primarily seasonal patterns, and confirmed a malaria outbreak in CAH since May 2012. This parasitological and epidemiological baseline assessment demonstrates that malaria transmission and parasite prevalence is heterogeneous in the Peruvian Amazon, and influenced by local socio-demographics and ecological contexts. Riverine and road construction/deforestation contexts must be taken into account in order to carry out effective anti-malaria control and elimination efforts.

The Climate Effects of Deforestation the Amazon Rainforest under Global Warming Conditions

NASA Astrophysics Data System (ADS)

Werth, D.; Avissar, R.

2006-12-01

Replacement of tropical rainforests has been observed to have a strong drying effect in Amazon simulations, with effects reaching high into the atmospheric column and into the midlatitudes. The drying effects of deforestation, however, can be moderated by the effects of global warming, which should accelerate the hydrologic cycle of the Amazon. The effects of a prescribed, time-varying Amazon deforestation done in conjunction with a steady, moderate increase in CO2 concentrations are determined using a climate model. The model agrees with previous studies when each forcing is applied individually - compared to a control run, Amazon deforestation decreases the local precipitation and global warming increases it. When both are applied, however, the precipitation and other hydrologic variables decrease, but to a lesser extent than when deforestation alone was applied. In effect, the two effects act opposite to one another and bring the simulated climate closer to that of the control.

Linking Deforestation to Malaria in the Amazon: Characterization of the Breeding Habitat of the Principal Malaria Vector, Anopheles darlingi

PubMed Central

Vittor, Amy Y.; Pan, William; Gilman, Robert H.; Tielsch, James; Glass, Gregory; Shields, Tim; Sánchez-Lozano, Wagner; Pinedo, Viviana V.; Salas-Cobos, Erit; Flores, Silvia; Patz, Jonathan A.

2009-01-01

This study examined the larval breeding habitat of a major South American malaria vector, Anopheles darlingi, in areas with varying degrees of ecologic alteration in the Peruvian Amazon. Water bodies were repeatedly sampled across 112 km of transects along the Iquitos-Nauta road in ecologically varied areas. Field data and satellite imagery were used to determine the landscape composition surrounding each site. Seventeen species of Anopheles larvae were collected. Anopheles darlingi larvae were present in 87 of 844 sites (10.3%). Sites with A. darlingi larvae had an average of 24.1% forest cover, compared with 41.0% for sites without A. darlingi (P < 0.0001). Multivariate analysis identified seasonality, algae, water body size, presence of human populations, and the amount of forest and secondary growth as significant determinants of A. darlingi presence. We conclude that deforestation and associated ecologic alterations are conducive to A. darlingi larval presence, and thereby increase malaria risk. PMID:19556558

Depopulation of rural landscapes exacerbates fire activity in the western Amazon.

PubMed

Uriarte, María; Pinedo-Vasquez, Miquel; DeFries, Ruth S; Fernandes, Katia; Gutierrez-Velez, Victor; Baethgen, Walter E; Padoch, Christine

2012-12-26

Destructive fires in Amazonia have occurred in the past decade, leading to forest degradation, carbon emissions, impaired air quality, and property damage. Here, we couple climate, geospatial, and province-level census data, with farmer surveys to examine the climatic, demographic, and land use factors associated with fire frequency in the Peruvian Amazon from 2000 to 2010. Although our results corroborate previous findings elsewhere that drought and proximity to roads increase fire frequency, the province-scale analysis further identifies decreases in rural populations as an additional factor. Farmer survey data suggest that increased burn scar frequency and size reflect increased flammability of emptying rural landscapes and reduced capacity to control fire. With rural populations projected to decline, more frequent drought, and expansion of road infrastructure, fire risk is likely to increase in western Amazonia. Damage from fire can be reduced through warning systems that target high-risk locations, coordinated fire fighting efforts, and initiatives that provide options for people to remain in rural landscapes.

Depopulation of rural landscapes exacerbates fire activity in the western Amazon

PubMed Central

Uriarte, María; Pinedo-Vasquez, Miquel; DeFries, Ruth S.; Fernandes, Katia; Gutierrez-Velez, Victor; Baethgen, Walter E.; Padoch, Christine

2012-01-01

Destructive fires in Amazonia have occurred in the past decade, leading to forest degradation, carbon emissions, impaired air quality, and property damage. Here, we couple climate, geospatial, and province-level census data, with farmer surveys to examine the climatic, demographic, and land use factors associated with fire frequency in the Peruvian Amazon from 2000 to 2010. Although our results corroborate previous findings elsewhere that drought and proximity to roads increase fire frequency, the province-scale analysis further identifies decreases in rural populations as an additional factor. Farmer survey data suggest that increased burn scar frequency and size reflect increased flammability of emptying rural landscapes and reduced capacity to control fire. With rural populations projected to decline, more frequent drought, and expansion of road infrastructure, fire risk is likely to increase in western Amazonia. Damage from fire can be reduced through warning systems that target high-risk locations, coordinated fire fighting efforts, and initiatives that provide options for people to remain in rural landscapes. PMID:23236144

¿Somos iguales? Using a structural violence framework to understand gender and health inequities from an intersectional perspective in the Peruvian Amazon

PubMed Central

Shannon, Geordan D.; Motta, Angelica; Cáceres, Carlos F.; Skordis-Worrall, Jolene; Bowie, Diana; Prost, Audrey

2017-01-01

ABSTRACT Background: In the Peruvian Amazon, historical events of colonization and political marginalization intersect with identities of ethnicity, class and geography in the construction of gender and health inequities. Gender-based inequalities can manifest in poor health outcomes via discriminatory practices, healthcare system imbalances, inequities in health research, and differential exposures and vulnerabilities to diseases. Structural violence is a comprehensive framework to explain the mechanisms by which social forces such as poverty, racism and gender inequity become embodied as individual experiences and health outcomes, and thus may be a useful tool in structuring an intersectional analysis of gender and health inequities in Amazonian Peru. Objective: The aim of this paper is to explore the intersection of gender inequities with other social inequalities in the production of health and disease in Peru’s Amazon using a structural violence approach. Design: Exploratory qualitative research was performed in two Loreto settings – urban Iquitos and the rural Lower Napo River region – between March and November 2015. This included participant observation with prolonged stays in the community, 46 semi-structured individual interviews and three group discussions. Thematic analysis was performed to identify emerging themes related to gender inequalities in health and healthcare and how these intersect with layered social disadvantages in the reproduction of health and illness. We employed a structural violence approach to construct an intersectional analysis of gender and health inequities in Amazonian Peru. Results: Our findings were arranged into five interrelated domains within a gender, structural violence and health model: gender as a symbolic institution, systemic gender-based violence, interpersonal violence, the social determinants of health, and other health outcomes. Each domain represents one aspect of the complex associations between gender, gender inequity and health. Through this model, we were able to explore: gender, health and intersectionality; structural violence; and to highlight particular local gender and health dynamics. Intersecting influences of poverty, ethnicity, geography and gender served as significant barriers to healthcare in both rural and urban settings. PMID:28640664

[Globalization, inequality, and transmission of tropical diseases in the Venezuelan Amazon].

PubMed

Botto-Abella, Carlos; Graterol-Mendoza, Beatriz

2007-01-01

Economic globalization appears to be causing greater inequalities and increased vulnerability to tropical diseases around the world. The Venezuelan Amazon population, especially the rural indigenous population, displays among the worst health indicators in the Americas. High infant mortality rates in remote indigenous populations indicate that such communities have been affected by the globalization of disease, rather than favored by globalization of health. Globalization has also influenced public policies in the country, affecting the efficiency of control programs targeting tropical diseases. A new global pact for the sustainable development of the planet is needed, supported by the globalization of human values and rights. In Venezuela, new policies for the indigenous health sector, more resources, and greater autonomy could help reduce the inequities described here in the Venezuelan Amazon.

Dynamics of Malaria Drug Resistance Patterns in the Amazon Basin Region following Changes in Peruvian National Treatment Policy for Uncomplicated Malaria▿ †

PubMed Central

Bacon, David J.; McCollum, Andrea M.; Griffing, Sean M.; Salas, Carola; Soberon, Valeria; Santolalla, Meddly; Haley, Ryan; Tsukayama, Pablo; Lucas, Carmen; Escalante, Ananias A.; Udhayakumar, Venkatachalam

2009-01-01

Monitoring changes in the frequencies of drug-resistant and -sensitive genotypes can facilitate in vivo clinical trials to assess the efficacy of drugs before complete failure occurs. Peru changed its national treatment policy for uncomplicated malaria to artesunate (ART)-plus-mefloquine (MQ) combination therapy in the Amazon basin in 2001. We genotyped isolates collected in 1999 and isolates collected in 2006 to 2007 for mutations in the Plasmodium falciparum dihydrofolate reductase (Pfdhfr) and dihydropteroate synthase (Pfdhps) genes, multidrug resistance gene 1 (Pfmdr-1), the chloroquine (CQ) resistance transporter gene (Pfcrt), and the Ca2+ ATPase gene (PfATP6); these have been shown to be involved in resistance to sulfadoxine-pyrimethamine (SP), MQ, CQ, and possibly ART, respectively. Microsatellite haplotypes around the Pfdhfr, Pfdhps, Pfcrt, and Pfmdr-1 loci were also determined. There was a significant decline in the highly SP resistant Pfdhfr and Pfdhps genotypes from 1999 to 2006. In contrast, a CQ-resistant Pfcrt genotype increased in frequency during the same period. Among five different Pfmdr-1 allelic forms noted in 1999, two genotypes increased in frequency while one genotype decreased by 2006. We also noted previously undescribed polymorphisms in the PfATP6 gene as well as an increase in the frequency of a deletion mutant during this period. In addition, microsatellite analysis revealed that the resistant Pfdhfr, Pfdhps, and Pfcrt genotypes have each evolved from a single founder haplotype, while Pfmdr-1 genotypes have evolved from at least two independent haplotypes. Importantly, this study demonstrates that the Peruvian triple mutant Pfdhps genotypes are very similar to those found in other parts of South America. PMID:19258269

Functional anatomy of the female genital organs of the wild black agouti (Dasyprocta fuliginosa) female in the Peruvian Amazon.

PubMed

Mayor, P; Bodmer, R E; Lopez-Bejar, M

2011-02-01

This study examined anatomical and histological characteristics of genital organs of 38 black agouti females in the wild in different reproductive stages, collected by rural hunters in the North-eastern Peruvian Amazon. Females in the follicular phase of the estrous cycle had greater antral follicle sizes than other females, the largest antral follicle measuring 2.34mm. Antral follicles in pregnant females and females in luteal phase of the estrous cycle had an average maximum diameter smaller than 1mm. In black agouti females in follicular phase, some antral follicles are selected to continue to growth, reaching a pre-ovulatory diameter of 2mm. Mean ovulation rate was 2.5 follicles and litter size was 2.1 embryos or fetuses per pregnant female, resulting in a rate of ovum mortality of 20.8%. Many follicles from which ovulation did not occur of 1-mm maximum diameter luteinize forming accessory CL. The constituent active luteal tissues of the ovary are functional and accessory CL. Although all females had accessory CL, transformation of follicles into accessory CL occurred especially in pregnant females, resulting in a contribution from 9% to 23% of the total luteal volume as pregnancy advances. The persistence of functional CL throughout pregnancy might reflect the importance for the maintenance of gestation and may be essential for the continuous hormonal production. The duplex uterus of the agouti female is composed by two completely independent uterine horns with correspondent separate cervices opening into the vagina. In pregnant females, most remarkable observed uterine adaptations were induced by the progressive enlargement caused by the normal pregnancy evolution. The wild black agouti showed different vaginal epithelium features in accordance with the reproductive state of the female. Copyright © 2011 Elsevier B.V. All rights reserved.

Dealing with AFLP genotyping errors to reveal genetic structure in Plukenetia volubilis (Euphorbiaceae) in the Peruvian Amazon

PubMed Central

Vašek, Jakub; Viehmannová, Iva; Ocelák, Martin; Cachique Huansi, Danter; Vejl, Pavel

2017-01-01

An analysis of the population structure and genetic diversity for any organism often depends on one or more molecular marker techniques. Nonetheless, these techniques are not absolutely reliable because of various sources of errors arising during the genotyping process. Thus, a complex analysis of genotyping error was carried out with the AFLP method in 169 samples of the oil seed plant Plukenetia volubilis L. from small isolated subpopulations in the Peruvian Amazon. Samples were collected in nine localities from the region of San Martin. Analysis was done in eight datasets with a genotyping error from 0 to 5%. Using eleven primer combinations, 102 to 275 markers were obtained according to the dataset. It was found that it is only possible to obtain the most reliable and robust results through a multiple-level filtering process. Genotyping error and software set up influence both the estimation of population structure and genetic diversity, where in our case population number (K) varied between 2–9 depending on the dataset and statistical method used. Surprisingly, discrepancies in K number were caused more by statistical approaches than by genotyping errors themselves. However, for estimation of genetic diversity, the degree of genotyping error was critical because descriptive parameters (He, FST, PLP 5%) varied substantially (by at least 25%). Due to low gene flow, P. volubilis mostly consists of small isolated subpopulations (ΦPT = 0.252–0.323) with some degree of admixture given by socio-economic connectivity among the sites; a direct link between the genetic and geographic distances was not confirmed. The study illustrates the successful application of AFLP to infer genetic structure in non-model plants. PMID:28910307

[Health and nutrition of indigenous and nonindigenous children in the Peruvian Amazon].

PubMed

Díaz, Adrián; Arana, Ana; Vargas-Machuca, Rocío; Antiporta, Daniel

2015-07-01

Evaluate the nutritional status of indigenous and nonindigenous children under 5 in two provinces in the Peruvian Amazon. . Descriptive cross-sectional representative study of families with children under 5 in the provinces of Bagua and Condorcanqui in Peru. The study consisted of an interview with the child's or children's mother or caregiver, anthropometric assessment, capillary hemoglobin measurement, screening for intestinal parasites in children under 5, access to health services, history of acute respiratory infections and acute diarrheal diseases, socioeconomic status, and intake of inadequately iodized salt. Using generalized linear methods, the determinants of chronic malnutrition and anemia in children were identified in each study population. . A total of 986 families and 1 372 children were assessed. The prevalence of chronic malnutrition was higher in the indigenous population than in the nonindigenous population (56.2% versus 21.9%); likewise for anemia (51.3% versus 40.9%). The determinants of chronic malnutrition in the two populations differed. In the indigenous population, the main determinants were an age of more than 36 months (OR 2.21; CI95% 1.61-3.04) and substandard housing (OR 2.9; CI95% 1.19-7.11), while in the non-indigenous population, they were extreme poverty (OR 2.31; IC95% 1.50-3.55) and institutional birth (OR 3.1; IC95% 2.00-4.83). There are marked gaps between the indigenous population and the nonindigenous population in terms of living conditions, access to health services, and the nutritional status of children under 5. Particular attention should be paid to the indigenous population to improve the way state programs and services are delivered in these contexts.

Early child health in an informal settlement in the Peruvian Amazon.

PubMed

Lee, Gwenyth O; Paredes Olortegui, Maribel; Salmón-Mulanovich, Gabriela; Peñataro Yori, Pablo; Kosek, Margaret

2016-10-12

Informal settlements are common throughout the developing world. In Peru, land occupations, commonly "invasions" in Spanish, are a means by which the extremely poor attempt to obtain access to land. Here, we examine difference in child health between two communities in the Peruvian Amazon, one well-established and one newly formed by 'invasion', as captured incidentally by a prospective epidemiological cohort study. Between 2002 and 2006 a study designed to describe the epidemiology of pediatric enteric infections and child growth in a community-based setting enrolled 442 children in Santa Clara de Nanay, a community adjacent to the city of Iquitos, in Loreto, Peru. In early 2003, a land occupation, commonly called an "invasion" in Spanish, was organized by members of the Santa Clara community, and approximately 20 % of participating study families began occupying privately owned agricultural land adjacent to Santa Clara, thus forming the new community of La Union. Parents in families that chose to invade reported less education than parents in families that chose not to. Children in the new community experienced a higher incidence of diarrheal disease and non-specific fevers, although fewer helminth infections, than children who remained in the established community. At the time of the invasion, there were no differences in anthropometric status between the two groups; however children in the new community experienced greater progressive growth faltering over the course of the longitudinal study. Growth faltering in early childhood represents an enduring loss of human potential. Therefore, our data suggests the human cost of land invasion may be disproportionately borne by the youngest individuals. Innovative policy strategies may be needed to protect this vulnerable group.

Helicobacter pylori from Peruvian Amerindians: Traces of Human Migrations in Strains from Remote Amazon, and Genome Sequence of an Amerind Strain

PubMed Central

Kersulyte, Dangeruta; Kalia, Awdhesh; Gilman, Robert H.; Mendez, Melissa; Herrera, Phabiola; Cabrera, Lilia; Velapatiño, Billie; Balqui, Jacqueline; Paredes Puente de la Vega, Freddy; Rodriguez Ulloa, Carlos A.; Cok, Jaime; Hooper, Catherine C.; Dailide, Giedrius; Tamma, Sravya; Berg, Douglas E.

2010-01-01

Background The gastric pathogen Helicobacter pylori is extraordinary in its genetic diversity, the differences between strains from well-separated human populations, and the range of diseases that infection promotes. Principal Findings Housekeeping gene sequences from H. pylori from residents of an Amerindian village in the Peruvian Amazon, Shimaa, were related to, but not intermingled with, those from Asia. This suggests descent of Shimaa strains from H. pylori that had infected the people who migrated from Asia into The Americas some 15,000+ years ago. In contrast, European type sequences predominated in strains from Amerindian Lima shantytown residents, but with some 12% Amerindian or East Asian-like admixture, which indicates displacement of ancestral purely Amerindian strains by those of hybrid or European ancestry. The genome of one Shimaa village strain, Shi470, was sequenced completely. Its SNP pattern was more Asian- than European-like genome-wide, indicating a purely Amerind ancestry. Among its unusual features were two cagA virulence genes, each distinct from those known from elsewhere; and a novel allele of gene hp0519, whose encoded protein is postulated to interact with host tissue. More generally, however, the Shi470 genome is similar in gene content and organization to those of strains from industrialized countries. Conclusions Our data indicate that Shimaa village H. pylori descend from Asian strains brought to The Americas many millennia ago; and that Amerind strains are less fit than, and were substantially displaced by, hybrid or European strains in less isolated communities. Genome comparisons of H. pylori from Amerindian and other communities should help elucidate evolutionary forces that have shaped pathogen populations in The Americas and worldwide. PMID:21124785

Endemic pemphigus in the Peruvian Amazon: epidemiology and risk factors for the development of complications during treatment*

PubMed Central

Ramos, Willy; Chacon, Gina Rocio; Galarza, Carlos; Gutierrez, Ericson Leonardo; Smith, Maria Eugenia; Ortega-Loayza, Alex Gerardo

2012-01-01

BACKGROUND Pemphigus is an autoimmune blistering disease. According to a report, in areas of endemic pemphigus foliaceus (EPF) in Peru there are cases of pemphigus vulgaris with epidemiologic, clinical and histopathologic characteristics similar to those of "endemic pemphigus vulgaris" (EPV) in Brazil. OBJECTIVES To determine the clinical and epidemiologic characteristics of endemic pemphigus and the risk factors of patients for developing complications during treatment. METHODS A study was carried out from July 2003 to March 2008. The study population was 60 patients with EPF and 7 patients with EPV evaluated in hospitals and clinics in the Peruvian Amazon and Lima. A multivariate analysis was carried out using binary logistic regression. RESULTS The average age of EPF patients was 31.4 years; 55% were men; 60% presented the generalized clinical variant. Non-compliance with the treatment was seen in 57.1% of the patients. Thirty-five percent presented complications (e.g. pyodermitis and pyelonephritis) during treatment. The risk factors for developing complications during treatment were non-compliance with the treatment and having the generalized clinical form. In the EPV group, the average age was 21.7 years; 71.4% were men. All patients presented with the mucocutaneous clinical variant and the initial presentation consisted of oral mucosa lesions; 71.4% presented complications during treatment, pyodermitis being the most frequent. CONCLUSIONS Non-compliance with the treatment and the generalized clinical form are risk factors for the development of complications during treatment of patients with EPF. Peru indeed has EPV cases with epidemiologic characteristics similar to EPF. Living in a rural area may represent a risk factor for the development of complications during treatment of patients with EPV. PMID:23197201

River Boats Contribute to the Regional Spread of the Dengue Vector Aedes aegypti in the Peruvian Amazon

PubMed Central

Guagliardo, Sarah Anne; Morrison, Amy C.; Barboza, Jose Luis; Requena, Edwin; Astete, Helvio; Vazquez-Prokopec, Gonzalo; Kitron, Uriel

2015-01-01

Background and Objectives The dramatic range expansion of the dengue vector Aedes aegypti is associated with various anthropogenic transport activities, but little is known about the underlying mechanisms driving this geographic expansion. We longitudinally characterized infestation of different vehicle types (cars, boats, etc.) to estimate the frequency and intensity of mosquito introductions into novel locations (propagule pressure). Methods Exhaustive adult and immature Ae. aegypti collections were performed on six different vehicle types at five ports and two bus/ taxi departure points in the Amazonian city of Iquitos, Peru during 2013. Aquatic vehicles included 32 large and 33 medium-sized barges, 53 water taxis, and 41 speed boats. Terrestrial vehicles sampled included 40 buses and 30 taxis traveling on the only highway in the region. Ae. aegypti adult infestation rates and immature indices were analyzed by vehicle type, location within vehicles, and sampling date. Results Large barges (71.9% infested) and medium barges (39.4% infested) accounted for most of the infestations. Notably, buses had an overall infestation rate of 12.5%. On large barges, the greatest number of Ae. aegypti adults were found in October, whereas most immatures were found in February followed by October. The vast majority of larvae (85.9%) and pupae (76.7%) collected in large barges were produced in puddles formed in cargo holds. Conclusions Because larges barges provide suitable mosquito habitats (due to dark, damp cargo storage spaces and ample oviposition sites), we conclude that they likely serve as significant contributors to mosquitoes’ propagule pressure across long distances throughout the Peruvian Amazon. This information can help anticipate vector population mixing and future range expansions of dengue and other viruses transmitted by Ae. aegypti. PMID:25860352

What caused the 2012 dengue outbreak in Pucallpa, Peru? A socio-ecological autopsy.

PubMed

Charette, Margot; Berrang-Ford, Lea; Llanos-Cuentas, Elmer Alejandro; Cárcamo, César; Kulkarni, Manisha

2017-02-01

Dengue is highly endemic in Peru, with increases in transmission particularly since vector re-infestation of the country in the 1980s. Pucallpa, the second largest city in the Peruvian Amazon, experienced a large outbreak in 2012 that caused more than 10,000 cases and 13 deaths. To date, there has been limited research on dengue in the Peruvian Amazon outside of Iquitos, and no published review or critical analysis of the 2012 Pucallpa dengue outbreak. This study describes the incidence, surveillance, and control of dengue in Ucayali to understand the factors that contributed to the 2012 Pucallpa outbreak. We employed a socio-ecological autopsy approach to consider distal and proximal contributing factors, drawing on existing literature and interviews with key personnel involved in dengue control, surveillance and treatment in Ucayali. Spatio-temporal analysis showed that relative risk of dengue was higher in the northern districts of Calleria (RR = 2.18), Manantay (RR = 1.49) and Yarinacocha (RR = 1.25) compared to all other districts between 2004 and 2014. The seasonal occurrence of the 2012 outbreak is consistent with typical seasonal patterns for dengue incidence in the region. Our assessment suggests that the outbreak was proximally triggered by the introduction of a new virus serotype (DENV-2 Asian/America) to the region. Increased travel, rapid urbanization, and inadequate water management facilitated the potential for virus spread and transmission, both within Pucallpa and regionally. These triggers occurred within the context of failures in surveillance and control programming, including underfunded and ad hoc vector control. These findings have implications for future prevention and control of dengue in Ucayali as new diseases such as chikungunya and Zika threaten the region. Copyright © 2016 Elsevier Ltd. All rights reserved.

River boats contribute to the regional spread of the dengue vector Aedes aegypti in the Peruvian Amazon.

PubMed

Guagliardo, Sarah Anne; Morrison, Amy C; Barboza, Jose Luis; Requena, Edwin; Astete, Helvio; Vazquez-Prokopec, Gonzalo; Kitron, Uriel

2015-04-01

The dramatic range expansion of the dengue vector Aedes aegypti is associated with various anthropogenic transport activities, but little is known about the underlying mechanisms driving this geographic expansion. We longitudinally characterized infestation of different vehicle types (cars, boats, etc.) to estimate the frequency and intensity of mosquito introductions into novel locations (propagule pressure). Exhaustive adult and immature Ae. aegypti collections were performed on six different vehicle types at five ports and two bus/ taxi departure points in the Amazonian city of Iquitos, Peru during 2013. Aquatic vehicles included 32 large and 33 medium-sized barges, 53 water taxis, and 41 speed boats. Terrestrial vehicles sampled included 40 buses and 30 taxis traveling on the only highway in the region. Ae. aegypti adult infestation rates and immature indices were analyzed by vehicle type, location within vehicles, and sampling date. Large barges (71.9% infested) and medium barges (39.4% infested) accounted for most of the infestations. Notably, buses had an overall infestation rate of 12.5%. On large barges, the greatest number of Ae. aegypti adults were found in October, whereas most immatures were found in February followed by October. The vast majority of larvae (85.9%) and pupae (76.7%) collected in large barges were produced in puddles formed in cargo holds. Because larges barges provide suitable mosquito habitats (due to dark, damp cargo storage spaces and ample oviposition sites), we conclude that they likely serve as significant contributors to mosquitoes' propagule pressure across long distances throughout the Peruvian Amazon. This information can help anticipate vector population mixing and future range expansions of dengue and other viruses transmitted by Ae. aegypti.

Anti-inflammatory and analgesic components from "hierba santa," a traditional medicine in Peru.

PubMed

Kawano, Marii; Otsuka, Mayumi; Umeyama, Kazuhiro; Yamazaki, Mikio; Shiota, Tetsuo; Satake, Motoyoshi; Okuyama, Emi

2009-04-01

"Hierba santa," a Peruvian herbal medicine, is used to alleviate many symptoms, including headache, hemorrhoids, fever, and rheumatism. Several Cestrum species are said to be the origin of hierba santa. Three lots of hierba santa: Cestrum auriculatum (herb 1 and herb 2) and C. hediundinum (herb 3), which were purchased from Peruvian markets at Cuzco (Andes area) and Equitos (Amazon area), respectively, were examined for their pharmacological activities and active components. Herbs 1-3 showed anti-inflammatory and analgesic activities in the in vivo writhing inhibition test in mouse and inhibited prostaglandin E(1)-, E(2)-, or ACh-induced contractions of guinea pig ileum in the Magnus method. Activity-based separation of each extract yielded cestrumines A and B, cestrusides A and B, a mixture of (+)- and (-)-pinoresinol glucosides, nicotiflorin, rutin, sinapoyl glucose, ursolic acid, beta-sitosteryl glucoside, and 2-sec-butyl-4,6-dihydroxyphenyl-beta-D: -glucopyranoside. Among them, cestrumine A and cestrusides A and B are new compounds. All three lots of hierba santa do not contain exactly the same active components.

Screening of medicinal plants traditionally used in Peruvian Amazon for in vitro antioxidant and anticancer potential.

PubMed

Tauchen, Jan; Huml, Lukas; Bortl, Ludvik; Doskocil, Ivo; Jarosova, Veronika; Marsik, Petr; Frankova, Adela; Clavo Peralta, Zoyla Mirella; Chuspe Zans, Maria-Elena; Havlik, Jaroslav; Lapcik, Oldrich; Kokoska, Ladislav

2018-04-16

Plants mentioned in this study have numerous records in traditional Peruvian medicine being used in treatment of cancer and other diseases likely to be associated with oxidative stress. Amongst the eight plant species tested, only Dysphania ambrosioides exhibited combinatory antioxidant and anti-proliferative effect on a broad spectrum of cancer cells (DPPH and ORAC values = 80.6 and 687.3 μg TE/mg extract, respectively; IC 50 against Caco-2, HT-29 and Hep-G2 = 129.2, 69.9 and 130.6, respectively). Alkaloids and phenolic compounds might significantly contribute to anticancer/antioxidant activity of this plant. The results justify the traditional medicinal use of this plant. Our findings further suggest that D. ambrosioides might serve as a prospective material for further development of novel plant-based antioxidant and/or anti-proliferative agents. Detailed analysis of chemical composition together with toxicology assessments and in vivo antioxidant/anti-proliferative activity of this plant should be carried out in order to verify its potential practical use.

Curriculum Reform and the Displacement of Knowledge in Peruvian Rural Secondary Schools: Exploring the Unintended Local Consequences of Global Education Policies

ERIC Educational Resources Information Center

Balarin, Maria; Benavides, Martin

2010-01-01

This paper draws attention to processes of policy implementation in developing contexts, and to the unintended consequences of education policies that follow international policy scripts without enough consideration of local histories and cultures. Drawing on a study of teaching practices in Peruvian rural secondary schools after a period of…

Mapping the geographic distribution of canopy species communities in lowland Amazon rainforest with CAO-AToMS (Invited)

NASA Astrophysics Data System (ADS)

Feret, J.; Asner, G. P.

2013-12-01

Mapping regional canopy diversity will greatly advance our understanding as well as the conservation of tropical rainforests. Changes in species composition across space and time are particularly important to understand the influence of climate, human activity and environmental factors on these ecosystems, but to date such monitoring is extremely challenging and is facing a scale gap between small-scale, highly detailed field studies and large-scale, low-resolution satellite observations. Advances were recently made in the field of spectroscopic imagery for the estimation of canopy alpha-diversity, and an original approach based on the segmentation of the spectral space proved its ability to estimate Shannon diversity index with unprecedented accuracy. We adapted this method in order to estimate spectral dissimilarity across landscape as a proxy for changes in species composition. We applied this approach and mapped species composition over four sites located in lowland rainforest of Peruvian Amazon. This study was based on spectroscopic imagery acquired using the Carnegie Airborne Observatory (CAO) Airborne Taxonomic Mapping System (AToMS), operating a unique sensor combining the fine spectral and spatial resolution required for such task. We obtained accurate estimation of Bray-Curtis distance between pairs of plots, which is the most commonly used metric to estimate dissimilarity in species composition (n=497 pairs, r=0.63). The maps of species composition were then compared to topo-hydrographic properties. Our results indicated a strong shift in species composition and community diversity between floodplain and terra firme terrain conditions as well as a significantly higher diversity of species communities within Amazonian floodplains. These results pave the way for global mapping of tropical canopy diversity at fine geographic resolution.

Estimating Sediment Delivery to The Rio Maranon, Peru Prior to Large-Scale Hydropower Developments Using High Resolution Imagery from Google Earth and a DJI Phantom 3 Drone

NASA Astrophysics Data System (ADS)

Goode, J. R.; Candelaria, T.; Kramer, N. R.; Hill, A. F.

2016-12-01

As global energy demands increase, generating hydroelectric power by constructing dams and reservoirs on large river systems is increasingly seen as a renewable alternative to fossil fuels, especially in emerging economies. Many large-scale hydropower projects are located in steep mountainous terrain, where environmental factors have the potential to conspire against the sustainability and success of such projects. As reservoir storage capacity decreases when sediment builds up behind dams, high sediment yields can limit project life expectancy and overall hydropower viability. In addition, episodically delivered sediment from landslides can make quantifying sediment loads difficult. These factors, combined with remote access, limit the critical data needed to effectively evaluate development decisions. In the summer of 2015, we conducted a basic survey to characterize the geomorphology, hydrology and ecology of 620 km of the Rio Maranon, Peru - a major tributary to the Amazon River, which flows north from the semi-arid Peruvian Andes - prior to its dissection by several large hydropower dams. Here we present one component of this larger study: a first order analysis of potential sediment inputs to the Rio Maranon, Peru. To evaluate sediment delivery and storage in this system, we used high resolution Google Earth imagery to delineate landslides, combined with high resolution imagery from a DJI Phantom 3 Drone, flown at alluvial fan inputs to the river in the field. Because hillslope-derived sediment inputs from headwater tributaries are important to overall ecosystem health in large river systems, our study has the potential to contribute to the understanding the impacts of large Andean dams on sediment connectivity to the Amazon basin.

[Molecular cloning and characterization in silico of phospholipase A(2) transcript isolated from Lachesis muta peruvian snake venom].

PubMed

Jimenez, Karim L; Zavaleta, Amparo I; Izaguirre, Victor; Yarleque, Armando; Inga, Rosio R

2010-01-01

Isolate and characterize in silico gene phospholipase A(2) (PLA(2)) isolated from Lachesis muta venom of the Peruvian Amazon. Technique RT-PCR from total RNA was using specific primers, the amplified DNA product was inserted into the pGEM vector for subsequent sequencing. By bioinformatic analysis identified an open reading frame of 414 nucleotides that encoded 138 amino acids including a signal peptide of 16 aminoacids, molecular weight and pI were 13,976 kDa and 5.66 respectively. The aminoacid sequence was called Lm-PLA(2)-Peru, contains an aspartate at position 49, this aminoacid in conjunction with other conserved residues such as Tyr-28, Gly-30, Gly-32, His-48, Tyr52, Asp99 are important for enzymatic activity. The comparison with the amino acid sequence data banks showed of similarity between PLA(2) from Lachesis stenophrys (93%) and other PLA(2) snake venoms and over 80% of other sPLA(2) family Viperidae venoms. A phylogenetic analysis showed that Lm-PLA(2)-Peru grouped with other acidic [Asp(49)] sPLA(2) previously isolated from Bothriechis schlegelii venom showing 89 % nucleotide sequence identity. Finally, the computer modeling indicated that enzyme had the characteristic structure of sPLA(2) group II that consisted of three α-helices, a β-wing, a short helix and a calcium-binding loop. The nucleotide sequence corresponding to the first transcript of gene from PLA(2) cloned of Lachesis muta venom, snake from the Peruvian rainforest.

The Influence of the Madden-Julian Oscillation (mjo) on Extreme Rainfall Over the Central and Southern Peruvian Andes

NASA Astrophysics Data System (ADS)

Heidinger, H.; Jones, C.; Carvalho, L. V.

2015-12-01

Extreme rainfall is important for the Andean region because of the large contribution of these events to the seasonal totals and consequent impacts on water resources for agriculture, water consumption, industry and hydropower generation, as well as the occurrence of floods and landslides. Over Central and Southern Peruvian Andes (CSPA), rainfall exceeding the 90th percentile contributed between 44 to 100% to the total Nov-Mar 1979-2010 rainfall. Additionally, precipitation from a large majority of stations in the CSPA exhibits statistically significant spectral peaks on intraseasonal time-scales (20 to 70 days). The Madden-Julian Oscillation (MJO) is the most important intraseasonal mode of atmospheric circulation and moist convection in the tropics and the occurrence of extreme weather events worldwide. Mechanisms explaining the relationships between the MJO and precipitation in the Peruvian Andes have not been properly described yet. The present study examines the relationships between the activity and phases of the MJO and the occurrence of extreme rainfall over the CSPA. We found that the frequency of extreme rainfall events increase in the CSPA when the MJO is active. MJO phases 5, 6 and 7 contribute to the overall occurrence of extreme rainfall events over the CSPA. However, how the MJO phases modulate extreme rainfall depends on the location of the stations. For instance, extreme precipitation (above the 90th percentile) in stations in the Amazon basin are slightly more sensitive to phases 2, 3 and 4; the frequency of extremes in stations in the Pacific basin increases in phases 5, 6 and 7 whereas phase 2, 3 and 7 modulates extreme precipitation in stations in the Titicaca basin. Greater variability among stations is observed when using the 95th and 99th percentiles to identify extremes. Among the main mechanisms that explain the increase in extreme rainfall events in the Peruvian Andes is the intensification of the easterly moisture flux anomalies, which are favored during certain phases of the MJO. Here dynamical mechanisms linking the MJO to the occurrence of extreme rainfall in stations in the Peruvian Andes are investigated using composites of integrated moisture flux and geopotential height anomalies.

Projected increases in the annual flood pulse of the western Amazon

NASA Astrophysics Data System (ADS)

Zulkafli, Zed; Buytaert, Wouter; Manz, Bastian; Veliz Rosas, Claudia; Willems, Patrick; Lavado-Casimiro, Waldo; Guyot, Jean-Loup; Santini, William

2016-04-01

The impact of a changing climate on the Amazon basin is a subject of intensive research due to its rich biodiversity and the significant role of rain forest in carbon cycling. Climate change has also direct hydrological impact, and there have been increasing efforts to understand such dynamics at continental and subregional scales such as the scale of the western Amazon. New projections from the Coupled Model Inter- comparison Project Phase 5 (CMIP5) ensemble indicate consistent climatic warming and increasing seasonality of precipitation in the Peruvian Amazon basin. Here we use a distributed land surface model to quantify the potential impact of this change in the climate on the hydrological regime of the river. Using extremes value analysis, historical and future projections of the annual minimum, mean, and maximum river flows are produced for a range of return periods between 1 and 100 years. We show that the RCP 4.5 and 8.5 scenarios of climate change project an increased severity of the wet season flood pulse (7.5% and 12% increases respectively for the 100- year return floods). These findings are in agreement with previously projected increases in high extremes under the Special Report on Emissions Scenarios (SRES) climate projections, and are important to highlight due to the potential consequences on reproductive processes of in-stream species, swamp forest ecology, and socio-economy in the floodplain, amid a growing literature that more strongly emphasises future droughts and their impact on the viability of the rain forest system over the greater Amazonia.

A Large Proportion of P. falciparum Isolates in the Amazon Region of Peru Lack pfhrp2 and pfhrp3: Implications for Malaria Rapid Diagnostic Tests

PubMed Central

Gamboa, Dionicia; Ho, Mei-Fong; Bendezu, Jorge; Torres, Katherine; Chiodini, Peter L.; Barnwell, John W.; Incardona, Sandra; Perkins, Mark; Bell, David; McCarthy, James; Cheng, Qin

2010-01-01

Background Malaria rapid diagnostic tests (RDTs) offer significant potential to improve the diagnosis of malaria, and are playing an increasing role in malaria case management, control and elimination. Peru, along with other South American countries, is moving to introduce malaria RDTs as components of malaria control programmes supported by the Global Fund for AIDS, TB and malaria. The selection of the most suitable malaria RDTs is critical to the success of the programmes. Methods Eight of nine microscopy positive P. falciparum samples collected in Iquitos, Peru tested negative or weak positive using HRP2-detecting RDTs. These samples were tested for the presence of pfhrp2 and pfhrp3 and their flanking genes by PCR, as well as the presence of HRP proteins by ELISA. To investigate for geographic extent of HRP-deleted parasites and their temporal occurrence a retrospective study was undertaken on 148 microscopy positive P. falciparum samples collected in different areas of the Amazon region of Peru. Findings Eight of the nine isolates lacked the pfhrp2 and/or pfhrp3 genes and one or both flanking genes, and the absence of HRP was confirmed by ELISA. The retrospective study showed that 61 (41%) and 103 (70%) of the 148 samples lacked the pfhrp2 or pfhrp3 genes respectively, with 32 (21.6%) samples lacking both hrp genes. Conclusions This is the first documentation of P. falciparum field isolates lacking pfhrp2 and/or pfhrp3. The high frequency and wide distribution of different parasites lacking pfhrp2 and/or pfhrp3 in widely dispersed areas in the Peruvian Amazon implies that malaria RDTs targeting HRP2 will fail to detect a high proportion of P. falciparum in malaria-endemic areas of Peru and should not be used. RDTs detecting parasite LDH or aldolase and quality microscopy should be use for malaria diagnosis in this region. There is an urgent need for investigation of the abundance and geographic distribution of these parasites in Peru and neighbouring countries. PMID:20111602

Dental remains of cebid platyrrhines from the earliest late Miocene of Western Amazonia, Peru: Macroevolutionary implications on the extant capuchin and marmoset lineages.

PubMed

Marivaux, Laurent; Adnet, Sylvain; Altamirano-Sierra, Ali J; Pujos, François; Ramdarshan, Anusha; Salas-Gismondi, Rodolfo; Tejada-Lara, Julia V; Antoine, Pierre-Olivier

2016-11-01

Undoubted fossil Cebidae have so far been primarily documented from the late middle Miocene of Colombia, the late Miocene of Brazilian Amazonia, the early Miocene of Peruvian Amazonia, and very recently from the earliest Miocene of Panama. The evolutionary history of cebids is far from being well-documented, with notably a complete blank in the record of callitrichine stem lineages until and after the late middle Miocene (Laventan SALMA). Further documenting their evolutionary history is therefore of primary importance. Recent field efforts in Peruvian Amazonia (Contamana area, Loreto Department) have allowed for the discovery of an early late Miocene (ca. 11 Ma; Mayoan SALMA) fossil primate-bearing locality (CTA-43; Pebas Formation). In this study, we analyze the primate material, which consists of five isolated teeth documenting two distinct Cebidae: Cebus sp., a medium-sized capuchin (Cebinae), and Cebuella sp., a tiny marmoset (Callitrichinae). Although limited, this new fossil material of platyrrhines contributes to documenting the post-Laventan evolutionary history of cebids, and besides testifies to the earliest occurrences of the modern Cebuella and Cebus/Sapajus lineages in the Neotropics. Regarding the evolutionary history of callitrichine marmosets, the discovery of an 11 Ma-old fossil representative of the modern Cebuella pushes back by at least 6 Ma the age of the Mico/Cebuella divergence currently proposed by molecular biologists (i.e., ca. 4.5 Ma). This also extends back to > 11 Ma BP the divergence between Callithrix and the common ancestor (CA) of Mico/Cebuella, as well as the divergence between the CA of marmosets and Callimico (Goeldi's callitrichine). This discovery from Peruvian Amazonia implies a deep evolutionary root of the Cebuella lineage in the northwestern part of South America (the modern western Amazon basin), slightly before the recession of the Pebas mega-wetland system (PMWS), ca. 10.5 Ma, and well-before the subsequent establishment of the Amazon drainage system (ca. 9-7 Ma). During the late middle/early late Miocene interval, the PMWS was seemingly not a limiting factor for dispersals and widespread distribution of terrestrial mammals, but it was also likely a source of diversification via a complex patchwork of submerged/emerged lands varying through time. © 2016 Wiley Periodicals, Inc.

Spatial Pattern of Standing Timber Value across the Brazilian Amazon

PubMed Central

Ahmed, Sadia E.; Ewers, Robert M.

2012-01-01

The Amazon is a globally important system, providing a host of ecosystem services from climate regulation to food sources. It is also home to a quarter of all global diversity. Large swathes of forest are removed each year, and many models have attempted to predict the spatial patterns of this forest loss. The spatial patterns of deforestation are determined largely by the patterns of roads that open access to frontier areas and expansion of the road network in the Amazon is largely determined by profit seeking logging activities. Here we present predictions for the spatial distribution of standing value of timber across the Amazon. We show that the patterns of timber value reflect large-scale ecological gradients, determining the spatial distribution of functional traits of trees which are, in turn, correlated with timber values. We expect that understanding the spatial patterns of timber value across the Amazon will aid predictions of logging movements and thus predictions of potential future road developments. These predictions in turn will be of great use in estimating the spatial patterns of deforestation in this globally important biome. PMID:22590520

Peruvian and globally reported amino acid substitutions on the Mycobacterium tuberculosis pyrazinamidase suggest a conserved pattern of mutations associated to pyrazinamide resistance

PubMed Central

Zimic, Mirko; Sheen, Patricia; Quiliano, Miguel; Gutierrez, Andrés; Gilman, Robert H.

2010-01-01

Resistance to pyrazinamide in Mycobacterium tuberculosis is usually associated with a reduction of pyrazinamidase activity caused by mutations in pncA, the pyrazinamidase coding gene. Pyrazinamidase is a hydrolase that converts pyrazinamide, the antituberculous drug against the latent stage, to the active compound, pyrazinoic acid. To better understand the relationship between pncA mutations and pyrazinamide-resistance, it is necessary to analyze the distribution of pncA mutations from pyrazinamide resistant strains. We determined the distribution of Peruvian and globally reported pncA missense mutations from M. tuberculosis clinical isolates resistant to pyrazinamide. The distributions of the single amino acid substitutions were compared at the secondary-structure-domains level. The distribution of the Peruvian mutations followed a similar pattern as the mutations reported globally. A consensus clustering of mutations was observed in hot-spot regions located in the metal coordination site and to a lesser extent in the active site of the enzyme. The data was not able to reject the null hypothesis that both distributions are similar, suggesting that pncA mutations associated to pyrazinamide resistance in M. tuberculosis, follow a conserved pattern responsible to impair the pyrazinamidase activity. PMID:19963078

High-resolution forest carbon stocks and emissions in the Amazon.

PubMed

Asner, Gregory P; Powell, George V N; Mascaro, Joseph; Knapp, David E; Clark, John K; Jacobson, James; Kennedy-Bowdoin, Ty; Balaji, Aravindh; Paez-Acosta, Guayana; Victoria, Eloy; Secada, Laura; Valqui, Michael; Hughes, R Flint

2010-09-21

Efforts to mitigate climate change through the Reduced Emissions from Deforestation and Degradation (REDD) depend on mapping and monitoring of tropical forest carbon stocks and emissions over large geographic areas. With a new integrated use of satellite imaging, airborne light detection and ranging, and field plots, we mapped aboveground carbon stocks and emissions at 0.1-ha resolution over 4.3 million ha of the Peruvian Amazon, an area twice that of all forests in Costa Rica, to reveal the determinants of forest carbon density and to demonstrate the feasibility of mapping carbon emissions for REDD. We discovered previously unknown variation in carbon storage at multiple scales based on geologic substrate and forest type. From 1999 to 2009, emissions from land use totaled 1.1% of the standing carbon throughout the region. Forest degradation, such as from selective logging, increased regional carbon emissions by 47% over deforestation alone, and secondary regrowth provided an 18% offset against total gross emissions. Very high-resolution monitoring reduces uncertainty in carbon emissions for REDD programs while uncovering fundamental environmental controls on forest carbon storage and their interactions with land-use change.

Susceptibility of Peruvian mosquitoes to eastern equine encephalitis virus.

PubMed

Turell, M J; O'Guinn, M L; Dohm, D; Zyzak, M; Watts, D; Fernandez, R; Calampa, C; Klein, T A; Jones, J W

2008-07-01

Mosquitoes were collected in the Amazon Basin, near Iquitos, Peru, and used in experimental studies to evaluate their susceptibility to strains of eastern equine encephalitis virus (EEEV) that were isolated from mosquitoes captured within 20 km of Iquitos. When fed on hamsters or chickens with a viremia of 4105 plaque-forming units (PFU) of EEEV/ml, Culex pedroi Sirivanakarn and Belkin, Aedesfulvus (Wiedemann), Psorophora albigenu (Peryassu), and Psorophoraferox (Von Humboldt) were susceptible to infection, whereas none of the Aedes serratus (Theobald), Culex vomerifer Komp, Culex gnomatos Sallum, Huchings, and Ferreira, Culex portesi Senevet and Abonnenc, or Culex coronator Dyar and Knab became infected, even though they fed on the same viremic blood sources. When these mosquito species fed on animals with viremias of approximately 10(8) PFU/ml, Cx. pedroi, Ae.II (Brazil-Peru) and a lineage III (Argentina-Panama) isolate of EEEV. This study, combined with the repeated isolation of strains of EEEV from Cx. pedroi captured in the Amazon Basin region of Peru, suggests that Cx. pedroi may be the primary enzootic vector of EEEV in this region.

Vector competence of Peruvian mosquitoes (Diptera: Culicidae) for a subtype IIIC virus in the Venezuelan equine encephalomyelitis complex isolated from mosquitoes captured in Peru.

PubMed

Turell, M J; Dohm, D J; Fernandez, R; Calampa, C; O'Guinn, M L

2006-03-01

We evaluated mosquitoes collected in the Amazon Basin, near Iquitos, Peru, for their susceptibility to a subtype IIIC strain of the Venezuelan equine encephalomyelitis complex. This virus had been previously isolated from a pool of mixed Culex vomerifer and Cx. gnomatos captured near Iquitos, Peru, in 1997. After feeding on hamsters with viremias of about 10(8) plaque-forming units of virus per ml, Cx. gnomatos was the most efficient vector. Other species, such as Ochlerotatus fulvus and Psorophora cingulata, although highly susceptible to infection, were not efficient laboratory vectors of this virus due to a significant salivary gland barrier. The Cx. (Culex) species, consisting mostly of Cx. (Cux.) coronator, were nearly refractory to subtype IIIC virus and exhibited both midgut infection as well as salivary gland barriers. Additional studies on biting behavior, mosquito population densities, and vertebrate reservoir hosts of subtype IIIC virus are needed to determine the role that these species play in the maintenance and spread of this virus in the Amazon Basin region.

Experimental Infection of Rattus norvegicus by the Group II Intermediate Pathogen, Leptospira licerasiae.

PubMed

Fernandez, Carla; Lubar, Aristea A; Vinetz, Joseph M; Matthias, Michael A

2018-06-25

Leptospira licerasiae serovar Varillal, a group II intermediate pathogen species/serovar discovered in the Peruvian Amazon city of Iquitos, is commonly recognized in this region by sera from humans (at least 40% seroprevalence) without a known clinical history of leptospirosis. This high frequency of human seroreactivity remains unexplained. To test the hypothesis that the oral route of infection might explain the high rate of human seroreactivity against L. licerasiae , an experimental infection model using Rattus norvegicus was developed, given that rats were one of the original reservoir hosts identified as being colonized by this leptospire. Sprague-Dawley rats were experimentally exposed via mucosa, direct gastric gavage, or parenteral inoculation with nine different isolates of L. licerasiae originally isolated from Peruvian humans, peridomiciliary rodents, and wildlife. As shown by quantitative polymerase chain reaction of kidney tissue, Leptospira infection via these routes of infection was equally successful. Importantly, the data show that L. licerasiae infects R. norvegicus via the oral route demonstration, leading to renal colonization. Not only do these findings confirm the infectiousness of group II Leptospira , but also they underscore the potential importance of oral as well as mucosal and transcutaneous routes of Leptospira infection.

Plasmodium falciparum Malaria in the Peruvian Amazon, a Region of Low Transmission, Is Associated with Immunologic Memory

PubMed Central

Clark, Eva H.; Silva, Claudia J.; Weiss, Greta E.; Li, Shanping; Padilla, Carlos; Crompton, Peter D.; Hernandez, Jean N.

2012-01-01

The development of clinical immunity to Plasmodium falciparum malaria is thought to require years of parasite exposure, a delay often attributed to difficulties in developing protective antibody levels. In this study, we evaluated several P. falciparum vaccine candidate antigens, including apical membrane antigen 1 (AMA-1), circumsporozoite protein (CSP), erythrocyte binding antigen 175 (EBA-175), and the 19-kDa region of merozoite surface protein 1 (MSP119). After observing a more robust antibody response to MSP119, we evaluated the magnitude and longevity of IgG responses specific to this antigen in Peruvian adults and children before, during, and after P. falciparum infection. In this low-transmission region, even one reported prior infection was sufficient to produce a positive anti-MSP119 IgG response for >5 months in the absence of reinfection. We also observed an expansion of the total plasmablast (CD19+ CD27+ CD38high) population in the majority of individuals shortly after infection and detected MSP1-specific memory B cells in a subset of individuals at various postinfection time points. This evidence supports our hypothesis that effective antimalaria humoral immunity can develop in low-transmission regions. PMID:22252876

Plasmodium falciparum malaria in the Peruvian Amazon, a region of low transmission, is associated with immunologic memory.

PubMed

Clark, Eva H; Silva, Claudia J; Weiss, Greta E; Li, Shanping; Padilla, Carlos; Crompton, Peter D; Hernandez, Jean N; Branch, OraLee H

2012-04-01

The development of clinical immunity to Plasmodium falciparum malaria is thought to require years of parasite exposure, a delay often attributed to difficulties in developing protective antibody levels. In this study, we evaluated several P. falciparum vaccine candidate antigens, including apical membrane antigen 1 (AMA-1), circumsporozoite protein (CSP), erythrocyte binding antigen 175 (EBA-175), and the 19-kDa region of merozoite surface protein 1 (MSP1(19)). After observing a more robust antibody response to MSP1(19), we evaluated the magnitude and longevity of IgG responses specific to this antigen in Peruvian adults and children before, during, and after P. falciparum infection. In this low-transmission region, even one reported prior infection was sufficient to produce a positive anti-MSP1(19) IgG response for >5 months in the absence of reinfection. We also observed an expansion of the total plasmablast (CD19(+) CD27(+) CD38(high)) population in the majority of individuals shortly after infection and detected MSP1-specific memory B cells in a subset of individuals at various postinfection time points. This evidence supports our hypothesis that effective antimalaria humoral immunity can develop in low-transmission regions.

A new Myxidium species (Myxozoa: Myxosporea) infecting the gallbladder of the turtle Podocnemis unifilis (Testudines: Podocnemididae) from Peruvian Amazon.

PubMed

Espinoza, Luis L; Mertins, Omar; Gama, Gabriella S; Fernandes Patta, Ana C M; Mathews, Patrick D

2017-08-01

A new myxosporean species, Myxidium peruviensis n. sp., is described parasitizing the gall bladder of the yellow-spotted river turtle Podocnemis unifilis kept in captivity in an Amazonian Peruvian turtle rescue unit in the city of Iquitos, State of Loreto, Peru. The parasite was found in four of ten (40%) P. unifilis examined. The new species was characterized based on morphological and molecular phylogeny analyses. SSU rDNA sequence of the spores of M. peruviensis n. sp. resulted in 1876 nucleotides and this sequence did no match any of the Myxozoa available in the GenBank. Phylogenetic analysis identified the new species as a sister species of Myxidium turturibus, the unique Myxidium species described in a Neotropical turtle. Nevertheless, the SSU rDNA sequences of the new species and M. turturibus have only a 91.5% similarity. This is the first description and molecular study of a Myxozoa in a reptile from Peru. Considering the status of P. unifilis as vulnerable species, the infection by Myxidium parasites is emphasized as possible disease impeller, representing menace to the turtle conservation. Copyright © 2017 Elsevier B.V. All rights reserved.

[Lessons learned in the control of Aedes aegypti to address dengue and the emergency of chikungunya in Iquitos, Peru].

PubMed

Vilcarromero, Stalin; Casanova, Wilma; Ampuero, Julia S; Ramal-Asayag, Cesar; Siles, Crystyan; Díaz, Gloria; Durand, Salomón; Celis-Salinas, Juan C; Astete, Helvio; Rojas, Percy; Vásquez-La Torre, Gabriela; Marín, Johan; Bazán, Isabel; Alegre, Yuri; Morrison, Amy C; Rodriguez-Ferrucci, Hugo

2015-01-01

Dengue has affected Iquitos since 1990 causing outbreaks of major impact on public health and for this reason great efforts have been made for its temporal control. Currently, with the expansion of the chikungunya virus in the Americas and the threat of the emergence of the virus in Iquitos, we reflect on lessons learned by way of the activities undertaken in the area of vector control; epidemiological surveillance, diagnosis and clinical management during periods of outbreaks of dengue, in a way that will allow us to better face the threat of an outbreak of chikungunya virus in the largest city in the Peruvian Amazon.

Histidine-rich protein 2 (pfhrp2) and pfhrp3 gene deletions in Plasmodium falciparum isolates from select sites in Brazil and Bolivia.

PubMed

Rachid Viana, Giselle Maria; Akinyi Okoth, Sheila; Silva-Flannery, Luciana; Lima Barbosa, Danielle Regina; Macedo de Oliveira, Alexandre; Goldman, Ira F; Morton, Lindsay C; Huber, Curtis; Anez, Arletta; Dantas Machado, Ricardo Luiz; Aranha Camargo, Luís Marcelo; Costa Negreiros do Valle, Suiane; Marins Póvoa, Marinete; Udhayakumar, Venkatachalam; Barnwell, John W

2017-01-01

More than 80% of available malaria rapid diagnostic tests (RDTs) are based on the detection of histidine-rich protein-2 (PfHRP2) for diagnosis of Plasmodium falciparum malaria. Recent studies have shown the genes that code for this protein and its paralog, histidine-rich protein-3 (PfHRP3), are absent in parasites from the Peruvian Amazon Basin. Lack of PfHRP2 protein through deletion of the pfhrp2 gene leads to false-negative RDT results for P. falciparum. We have evaluated the extent of pfhrp2 and pfhrp3 gene deletions in a convenience sample of 198 isolates from six sites in three states across the Brazilian Amazon Basin (Acre, Rondonia and Para) and 25 isolates from two sites in Bolivia collected at different times between 2010 and 2012. Pfhrp2 and pfhrp3 gene and their flanking genes on chromosomes 7 and 13, respectively, were amplified from 198 blood specimens collected in Brazil. In Brazil, the isolates collected in Acre state, located in the western part of the Brazilian Amazon, had the highest percentage of deletions for pfhrp2 25 (31.2%) of 79, while among those collected in Rondonia, the prevalence of pfhrp2 gene deletion was only 3.3% (2 out of 60 patients). In isolates from Para state, all parasites were pfhrp2-positive. In contrast, we detected high proportions of isolates from all 3 states that were pfhrp3-negative ranging from 18.3% (11 out of 60 samples) to 50.9% (30 out of 59 samples). In Bolivia, only one of 25 samples (4%) tested had deleted pfhrp2 gene, while 68% (17 out of 25 samples) were pfhrp3-negative. Among the isolates tested, P. falciparum pfhrp2 gene deletions were present mainly in those from Acre State in the Brazilian Amazon. These results indicate it is important to reconsider the use of PfHRP2-based RDTs in the western region of the Brazilian Amazon and to implement appropriate surveillance systems to monitor pfhrp2 gene deletions in this and other parts of the Amazon region.

Histidine-rich protein 2 (pfhrp2) and pfhrp3 gene deletions in Plasmodium falciparum isolates from select sites in Brazil and Bolivia

PubMed Central

Rachid Viana, Giselle Maria; Akinyi Okoth, Sheila; Silva-Flannery, Luciana; Lima Barbosa, Danielle Regina; Macedo de Oliveira, Alexandre; Goldman, Ira F.; Morton, Lindsay C.; Huber, Curtis; Anez, Arletta; Dantas Machado, Ricardo Luiz; Aranha Camargo, Luís Marcelo; Costa Negreiros do Valle, Suiane; Marins Póvoa, Marinete; Barnwell, John W.

2017-01-01

More than 80% of available malaria rapid diagnostic tests (RDTs) are based on the detection of histidine-rich protein-2 (PfHRP2) for diagnosis of Plasmodium falciparum malaria. Recent studies have shown the genes that code for this protein and its paralog, histidine-rich protein-3 (PfHRP3), are absent in parasites from the Peruvian Amazon Basin. Lack of PfHRP2 protein through deletion of the pfhrp2 gene leads to false-negative RDT results for P. falciparum. We have evaluated the extent of pfhrp2 and pfhrp3 gene deletions in a convenience sample of 198 isolates from six sites in three states across the Brazilian Amazon Basin (Acre, Rondonia and Para) and 25 isolates from two sites in Bolivia collected at different times between 2010 and 2012. Pfhrp2 and pfhrp3 gene and their flanking genes on chromosomes 7 and 13, respectively, were amplified from 198 blood specimens collected in Brazil. In Brazil, the isolates collected in Acre state, located in the western part of the Brazilian Amazon, had the highest percentage of deletions for pfhrp2 25 (31.2%) of 79, while among those collected in Rondonia, the prevalence of pfhrp2 gene deletion was only 3.3% (2 out of 60 patients). In isolates from Para state, all parasites were pfhrp2-positive. In contrast, we detected high proportions of isolates from all 3 states that were pfhrp3-negative ranging from 18.3% (11 out of 60 samples) to 50.9% (30 out of 59 samples). In Bolivia, only one of 25 samples (4%) tested had deleted pfhrp2 gene, while 68% (17 out of 25 samples) were pfhrp3-negative. Among the isolates tested, P. falciparum pfhrp2 gene deletions were present mainly in those from Acre State in the Brazilian Amazon. These results indicate it is important to reconsider the use of PfHRP2-based RDTs in the western region of the Brazilian Amazon and to implement appropriate surveillance systems to monitor pfhrp2 gene deletions in this and other parts of the Amazon region. PMID:28301474

Historical and Present Day Mercury Contamination From Gold Mining in Three Feeding Guilds of Bats From the Peruvian Amazon

NASA Astrophysics Data System (ADS)

Kumar, A.; Divoll, T.

2014-12-01

Miners in many countries use mercury as an amalgam to separate gold from river sediments. In the last twenty years the price of gold has risen and the number of small-scale, artisanal gold mining operations in the Amazon basin have also increased. The influx of mercury into natural river systems has detrimental consequences for the surrounding ecosystem and for organisms, particularly those at higher trophic levels. Toxic mercury levels have been shown to impair reproductive, neurological and behavioral functioning of organisms. I used bats (Chiroptera) as a mammalian model system to study mercury contamination and accumulation due to gold mining from field caught and museum collection specimens in Amazonian Perú and showed that: (1) Total mercury concentrations in Amazonian bat species have increased over time since the 1920's; (2) Bat species from sites with current active mining have higher concentrations of mercury than non-mining sites, with some species having levels exceeding those considered toxic for mammals; (3) Higher trophic levels of bats (piscivores and insectivores) bioaccumulate more mercury than bats of lower trophic levels (frugivores); (4) Bats located in present day uncontaminated sites have the same mercury levels as bats collected in the 1920's from the Amazon basin. The variety of bat feeding guilds allowed for a comparison of how mercury accumulation is affected by diet within one taxonomic order. The novel use of museum specimens allowed for a look back into the historical timeline of mercury contamination in the Amazon basin. Bats represent a new and exciting study system since, like humans, they are mammals and should therefore show similar neurochemical and behavioral responses to this toxic element.

Tropical forest soil microbes and climate warming: An Andean-Amazon gradient and `SWELTR'

NASA Astrophysics Data System (ADS)

Nottingham, A.; Turner, B. L.; Fierer, N.; Whitaker, J.; Ostle, N. J.; McNamara, N. P.; Bardgett, R.; Silman, M.; Bååth, E.; Salinas, N.; Meir, P.

2017-12-01

Climate warming predicted for the tropics in the coming century will result in average temperatures under which no closed canopy forest exists today. There is, therefore, great uncertainty associated with the direction and magnitude of feedbacks between tropical forests and our future climate - especially relating to the response of soil microbes and the third of global soil carbon contained in tropical forests. While warming experiments are yet to be performed in tropical forests, natural temperature gradients are powerful tools to investigate temperature effects on soil microbes. Here we draw on studies from a 3.5 km elevation gradient - and 20oC mean annual temperature gradient - in Peruvian tropical forest, to investigate how temperature affects the structure of microbial communities, microbial metabolism, enzymatic activity and soil organic matter cycling. With decreased elevation, soil microbial diversity increased and community composition shifted, from taxa associated with oligotrophic towards copiotrophic traits. A key role for temperature in shaping these patterns was demonstrated by a soil translocation experiment, where temperature-manipulation altered the relative abundance of specific taxa. Functional implications of these community composition shifts were indicated by changes in enzyme activities, the temperature sensitivity of bacterial and fungal growth rates, and the presence of temperature-adapted iso-enzymes at different elevations. Studies from a Peruvian elevation transect indicated that soil microbial communities are adapted to long-term (differences with elevation) and short-term (translocation responses) temperature changes. These findings indicate the potential for adaptation of soil microbes in tropical soils to future climate warming. However, in order to evaluate the sensitivity of these processes to climate warming in lowland forests, in situ experimentation is required. Finally, we describe SWELTR (Soil Warming Experiment in Lowland Tropical Rainforest), a new soil warming experiment being undertaken on Barro Colorado Island, Panama, designed to improve our understanding of biogeochemical feedbacks to climate warming in lowland tropical forests.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yoon, Jin -Ho

Amazon rainfall is subject to year-to-year fluctuation resulting in drought and flood in various intensities. A major climatic driver of the interannual variation of the Amazon rainfall is El Niño/Southern Oscillation. Also, the Sea Surface Temperature over the Atlantic Ocean is identified as an important climatic driver on the Amazon water cycle. Previously, observational datasets were used to support the Atlantic influence on Amazon rainfall. Furthermore, it is found that multiple global climate models do reproduce the Atlantic-Amazon link robustly. However, there exist differences in rainfall response, which primarily depends on the climatological rainfall amount.

Security of the Brazilian Amazon Area

DTIC Science & Technology

1992-04-01

effect in Amazonia". Brazil’s Institute for Space Research. Sio Paulo, April 1991: 5-6. Thompson, Dick. "A Global Agenda for the Amazon." Time, 18...to be overcome as Brazil pursues settlement and development of the Amazon. The natural ecologic systems of the Amazon must be defended with...agricultural techniques appropriate to the region and developed within the context of a comprehensive, responsible program that meets Brazil’s needs for

Multi-model analysis of the Atlantic influence on Southern Amazon rainfall

DOE PAGES

Yoon, Jin -Ho

2015-12-07

Amazon rainfall is subject to year-to-year fluctuation resulting in drought and flood in various intensities. A major climatic driver of the interannual variation of the Amazon rainfall is El Niño/Southern Oscillation. Also, the Sea Surface Temperature over the Atlantic Ocean is identified as an important climatic driver on the Amazon water cycle. Previously, observational datasets were used to support the Atlantic influence on Amazon rainfall. Furthermore, it is found that multiple global climate models do reproduce the Atlantic-Amazon link robustly. However, there exist differences in rainfall response, which primarily depends on the climatological rainfall amount.

Coupled ecosystem/supply chain modelling of fish products from sea to shelf: the Peruvian anchoveta case.

PubMed

Avadí, Angel; Fréon, Pierre; Tam, Jorge

2014-01-01

Sustainability assessment of food supply chains is relevant for global sustainable development. A framework is proposed for analysing fishfood (fish products for direct human consumption) supply chains with local or international scopes. It combines a material flow model (including an ecosystem dimension) of the supply chains, calculation of sustainability indicators (environmental, socio-economic, nutritional), and finally multi-criteria comparison of alternative supply chains (e.g. fates of landed fish) and future exploitation scenarios. The Peruvian anchoveta fishery is the starting point for various local and global supply chains, especially via reduction of anchoveta into fishmeal and oil, used worldwide as a key input in livestock and fish feeds. The Peruvian anchoveta supply chains are described, and the proposed methodology is used to model them. Three scenarios were explored: status quo of fish exploitation (Scenario 1), increase in anchoveta landings for food (Scenario 2), and radical decrease in total anchoveta landings to allow other fish stocks to prosper (Scenario 3). It was found that Scenario 2 provided the best balance of sustainability improvements among the three scenarios, but further refinement of the assessment is recommended. In the long term, the best opportunities for improving the environmental and socio-economic performance of Peruvian fisheries are related to sustainability-improving management and policy changes affecting the reduction industry. Our approach provides the tools and quantitative results to identify these best improvement opportunities.

Coupled Ecosystem/Supply Chain Modelling of Fish Products from Sea to Shelf: The Peruvian Anchoveta Case

PubMed Central

Avadí, Angel; Fréon, Pierre; Tam, Jorge

2014-01-01

Sustainability assessment of food supply chains is relevant for global sustainable development. A framework is proposed for analysing fishfood (fish products for direct human consumption) supply chains with local or international scopes. It combines a material flow model (including an ecosystem dimension) of the supply chains, calculation of sustainability indicators (environmental, socio-economic, nutritional), and finally multi-criteria comparison of alternative supply chains (e.g. fates of landed fish) and future exploitation scenarios. The Peruvian anchoveta fishery is the starting point for various local and global supply chains, especially via reduction of anchoveta into fishmeal and oil, used worldwide as a key input in livestock and fish feeds. The Peruvian anchoveta supply chains are described, and the proposed methodology is used to model them. Three scenarios were explored: status quo of fish exploitation (Scenario 1), increase in anchoveta landings for food (Scenario 2), and radical decrease in total anchoveta landings to allow other fish stocks to prosper (Scenario 3). It was found that Scenario 2 provided the best balance of sustainability improvements among the three scenarios, but further refinement of the assessment is recommended. In the long term, the best opportunities for improving the environmental and socio-economic performance of Peruvian fisheries are related to sustainability-improving management and policy changes affecting the reduction industry. Our approach provides the tools and quantitative results to identify these best improvement opportunities. PMID:25003196

Predominance of asymptomatic and sub-microscopic infections characterizes the Plasmodium gametocyte reservoir in the Peruvian Amazon.

PubMed

Rovira-Vallbona, Eduard; Contreras-Mancilla, Juan José; Ramirez, Roberson; Guzmán-Guzmán, Mitchel; Carrasco-Escobar, Gabriel; Llanos-Cuentas, Alejandro; Vinetz, Joseph M; Gamboa, Dionicia; Rosanas-Urgell, Anna

2017-07-01

Malaria transmission requires that Anopheles mosquitoes ingest Plasmodium gametocyte stages circulating in the human bloodstream. In the context of malaria elimination, understanding the epidemiology of gametocytes relative to all Plasmodium infections and the contribution of asymptomatic and sub-microscopic parasite carriers to the gametocyte reservoir is necessary, especially in low endemic settings with predominance of P.vivax. A 13-month longitudinal study was conducted in two communities (n = 1935 individuals) of Loreto Department, Peru, with five active screenings for Plasmodium infections and gametocyte stages by quantitative real-time PCR (qPCR) and reverse transcription (RT)-qPCR, respectively. Parasite prevalence by qPCR was 7.2% for P.vivax (n = 520/7235; range by survey 6.0%-8.1%) and 3.2% for P.falciparum (n = 235/7235; range by survey 0.4%-7.7%). Sub-microscopic infections accounted for 73.5% of P.vivax (range by survey 60%-89%) and almost the totality of P.falciparum cases. Gametocytes were found in 28.4% P.vivax infections (range by survey 18.7%-34.1%), with a peak of 61.5% in one community at the start of the transmission season. About 59.8% of all P.vivax gametocyte carriers were asymptomatic and 31.9% were sub-microscopic. Age patterns for gametocyte prevalence paralleled asexual stage infections and peaked among >15-25 year old individuals. Asexual parasite density was found to be the strongest predictor for P.vivax gametocyte presence in longitudinal multivariate analysis (odds ratio 2.33 [95% confidence interval 1.96, 2.78]; P<0.001). Despite significant differences in seasonality patterns and P.vivax prevalence found at the local scale, sub-microscopic and asymptomatic infections predominate and contribute significantly to the gametocyte reservoir in different communities of the Peruvian Amazon. Control and elimination campaigns need sensitive tools to detect all infections that escape routine malaria surveillance, which may contribute to maintain transmission in the region.

Hotspots of Malaria Transmission in the Peruvian Amazon: Rapid Assessment through a Parasitological and Serological Survey

PubMed Central

Rosas-Aguirre, Angel; Speybroeck, Niko; Llanos-Cuentas, Alejandro; Rosanas-Urgell, Anna; Carrasco-Escobar, Gabriel; Rodriguez, Hugo; Gamboa, Dionicia; Contreras-Mancilla, Juan; Alava, Freddy; Soares, Irene S.; Remarque, Edmond; D´Alessandro, Umberto; Erhart, Annette

2015-01-01

Background With low and markedly seasonal malaria transmission, increasingly sensitive tools for better stratifying the risk of infection and targeting control interventions are needed. A cross-sectional survey to characterize the current malaria transmission patterns, identify hotspots, and detect recent changes using parasitological and serological measures was conducted in three sites of the Peruvian Amazon. Material and Methods After full census of the study population, 651 participants were interviewed, clinically examined and had a blood sample taken for the detection of malaria parasites (microscopy and PCR) and antibodies against P. vivax (PvMSP119, PvAMA1) and P. falciparum (PfGLURP, PfAMA1) antigens by ELISA. Risk factors for malaria infection (positive PCR) and malaria exposure (seropositivity) were assessed by multivariate survey logistic regression models. Age-specific seroprevalence was analyzed using a reversible catalytic conversion model based on maximum likelihood for generating seroconversion rates (SCR, λ). SaTScan was used to detect spatial clusters of serology-positive individuals within each site. Results The overall parasite prevalence by PCR was low, i.e. 3.9% for P. vivax and 6.7% for P. falciparum, while the seroprevalence was substantially higher, 33.6% for P. vivax and 22.0% for P. falciparum, with major differences between study sites. Age and location (site) were significantly associated with P. vivax exposure; while location, age and outdoor occupation were associated with P. falciparum exposure. P. falciparum seroprevalence curves showed a stable transmission throughout time, while for P. vivax transmission was better described by a model with two SCRs. The spatial analysis identified well-defined clusters of P. falciparum seropositive individuals in two sites, while it detected only a very small cluster of P. vivax exposure. Conclusion The use of a single parasitological and serological malaria survey has proven to be an efficient and accurate method to characterize the species specific heterogeneity in malaria transmission at micro-geographical level as well as to identify recent changes in transmission. PMID:26356311

The importance of chemosensory clues in Aguaruna tree classification and identification.

PubMed

Jernigan, Kevin A

2008-05-03

The ethnobotanical literature still contains few detailed descriptions of the sensory criteria people use for judging membership in taxonomic categories. Olfactory criteria in particular have been explored very little. This paper will describe the importance of odor for woody plant taxonomy and identification among the Aguaruna Jívaro of the northern Peruvian Amazon, focusing on the Aguaruna category númi (trees excluding palms). Aguaruna informants almost always place trees that they consider to have a similar odor together as kumpají - 'companions,' a metaphor they use to describe trees that they consider to be related. The research took place in several Aguaruna communities in the upper Marañón region of the Peruvian Amazon. Structured interview data focus on informant criteria for membership in various folk taxa of trees. Informants were also asked to explain what members of each group of related companions had in common. This paper focuses on odor and taste criteria that came to light during these structured interviews. Botanical voucher specimens were collected, wherever possible. Of the 182 tree folk genera recorded in this study, 51 (28%) were widely considered to possess a distinctive odor. Thirty nine of those (76%) were said to have odors similar to some other tree, while the other 24% had unique odors. Aguaruna informants very rarely described tree odors in non-botanical terms. Taste was used mostly to describe trees with edible fruits. Trees judged to be related were nearly always in the same botanical family. The results of this study illustrate that odor of bark, sap, flowers, fruit and leaves are important clues that help the Aguaruna to judge the relatedness of trees found in their local environment. In contrast, taste appears to play a more limited role. The results suggest a more general ethnobotanical hypothesis that could be tested in other cultural settings: people tend to consider plants with similar odors to be related, but say that plants with unique odors are unrelated to any other plants.

Risk factors associated with malnutrition in one-year-old children living in the Peruvian Amazon.

PubMed

Joseph, Serene A; Casapía, Martín; Blouin, Brittany; Maheu-Giroux, Mathieu; Rahme, Elham; Gyorkos, Theresa W

2014-12-01

Children under two years of age are in the most critical window for growth and development. As mobility increases, this time period also coincides with first exposure to soil-transmitted helminth (STH) infections in tropical and sub-tropical environments. The association between malnutrition and STH infection, however, has been understudied in this vulnerable age group. A nested cross-sectional survey was conducted in 12 and 13-month old children participating in a deworming trial in Iquitos, an STH-endemic area of the Peruvian Amazon. An extensive socio-demo-epi questionnaire was administered to the child's parent. Length and weight were measured, and the Bayley Scales of Infant and Toddler Development were administered to measure cognition, language, and fine motor development. Stool specimens were collected to determine the presence of STH. The association between malnutrition (i.e. stunting and underweight) and STH infection, and other child, maternal, and household characteristics, was analyzed using multivariable Poisson regression. A total of 1760 children were recruited between September 2011 and June 2012. Baseline data showed a prevalence of stunting and underweight of 24.2% and 8.6%, respectively. In a subgroup of 880 randomly-allocated children whose specimens were analyzed by the Kato-Katz method, the prevalence of any STH infection was 14.5%. Risk factors for stunting in these 880 children included infection with at least one STH species (aRR = 1.37; 95% CI 1.01, 1.86) and a lower development score (aRR = 0.97; 95% CI: 0.95, 0.99). A lower development score was also a significant risk factor for underweight (aRR = 0.92; 95% CI: 0.89, 0.95). The high prevalence of malnutrition, particularly stunting, and its association with STH infection and lower developmental attainment in early preschool-age children is of concern. Emphasis should be placed on determining the most cost-effective, integrated interventions to reduce disease and malnutrition burdens in this vulnerable age group.

Easier said than done: challenges of applying the Ecohealth approach to the study on heavy metals exposure among indigenous communities of the Peruvian Amazon.

PubMed

Anticona, Cynthia; Coe, Anna-Britt; Bergdahl, Ingvar A; San Sebastian, Miguel

2013-05-03

The renewed interest in community participation in health research is linked to its potential for bridging gaps between research and practice. Its main attributes are the generation of knowledge that can lead to socially robust, long-lasting solutions and the creation of a co-learner relationship between researchers and research users. Following this philosophy, Ecohealth has evolved into a specialized framework for participatory research on the impact of pollution on ecosystems and human health. However, its principles pose considerable challenges. Its outcomes are strongly influenced by contextual factors that are impossible to control for ahead of time.This paper describes how the Ecohealth principles were applied to an epidemiological study of heavy metals exposure among indigenous communities of the Peruvian Amazon. It illustrates how knowledge generated from participatory research does not necessarily imply solving a public health problem. This study aimed to contribute to the understanding of the benefits and barriers of following the basic principles of the Ecohealth approach, and assist researchers working in similar contexts. Based upon their personal experience as participant observers, the authors describe the research process; then, they discuss the most important challenges faced, their implications, and the attempted strategies for resolution. Challenges were grouped into four themes: (1) building trust; (2) one partnership, many stakeholders, multiple agendas; (3) being a researcher; and (4) communicating complex and unexpected findings. Integrating the principles of transdisciplinarity and participation posed a series of challenges to the research process that were difficult, and sometimes impossible to overcome. However, positive outcomes from this experience were the lessons learned by the different actors. Despite the lack of immediate action, it is expected that useful interventions to prevent and control lead exposure in the Corrientes population will be implemented in the medium term.

Easier said than done: challenges of applying the Ecohealth approach to the study on heavy metals exposure among indigenous communities of the Peruvian Amazon

PubMed Central

2013-01-01

Background The renewed interest in community participation in health research is linked to its potential for bridging gaps between research and practice. Its main attributes are the generation of knowledge that can lead to socially robust, long-lasting solutions and the creation of a co-learner relationship between researchers and research users. Following this philosophy, Ecohealth has evolved into a specialized framework for participatory research on the impact of pollution on ecosystems and human health. However, its principles pose considerable challenges. Its outcomes are strongly influenced by contextual factors that are impossible to control for ahead of time. This paper describes how the Ecohealth principles were applied to an epidemiological study of heavy metals exposure among indigenous communities of the Peruvian Amazon. It illustrates how knowledge generated from participatory research does not necessarily imply solving a public health problem. This study aimed to contribute to the understanding of the benefits and barriers of following the basic principles of the Ecohealth approach, and assist researchers working in similar contexts. Research process Based upon their personal experience as participant observers, the authors describe the research process; then, they discuss the most important challenges faced, their implications, and the attempted strategies for resolution. Challenges Challenges were grouped into four themes: (1) building trust; (2) one partnership, many stakeholders, multiple agendas; (3) being a researcher; and (4) communicating complex and unexpected findings. Conclusions Integrating the principles of transdisciplinarity and participation posed a series of challenges to the research process that were difficult, and sometimes impossible to overcome. However, positive outcomes from this experience were the lessons learned by the different actors. Despite the lack of immediate action, it is expected that useful interventions to prevent and control lead exposure in the Corrientes population will be implemented in the medium term. PMID:23642035

Multidisciplinary and participatory workshops with stakeholders in a community of extreme poverty in the Peruvian Amazon: Development of priority concerns and potential health, nutrition and education interventions

PubMed Central

Casapia, Martin; Joseph, Serene A; Gyorkos, Theresa W

2007-01-01

Background Communities of extreme poverty suffer disproportionately from a wide range of adverse outcomes, but are often neglected or underserved by organized services and research attention. In order to target the first Millennium Development Goal of eradicating extreme poverty, thereby reducing health inequalities, participatory research in these communities is needed. Therefore, the purpose of this study was to determine the priority problems and respective potential cost-effective interventions in Belen, a community of extreme poverty in the Peruvian Amazon, using a multidisciplinary and participatory focus. Methods Two multidisciplinary and participatory workshops were conducted with important stakeholders from government, non-government and community organizations, national institutes and academic institutions. In Workshop 1, participants prioritized the main health and health-related problems in the community of Belen. Problem trees were developed to show perceived causes and effects for the top six problems. In Workshop 2, following presentations describing data from recently completed field research in school and household populations of Belen, participants listed potential interventions for the priority problems, including associated barriers, enabling factors, costs and benefits. Results The top ten priority problems in Belen were identified as: 1) infant malnutrition; 2) adolescent pregnancy; 3) diarrhoea; 4) anaemia; 5) parasites; 6) lack of basic sanitation; 7) low level of education; 8) sexually transmitted diseases; 9) domestic violence; and 10) delayed school entry. Causes and effects for the top six problems, proposed interventions, and factors relating to the implementation of interventions were multidisciplinary in nature and included health, nutrition, education, social and environmental issues. Conclusion The two workshops provided valuable insight into the main health and health-related problems facing the community of Belen. The participatory focus of the workshops ensured the active involvement of important stakeholders from Belen. Based on the results of the workshops, effective and essential interventions are now being planned which will contribute to reducing health inequalities in the community. PMID:17623093

NTFP harvesters as citizen scientists: Validating traditional and crowdsourced knowledge on seed production of Brazil nut trees in the Peruvian Amazon.

PubMed

Thomas, Evert; Valdivia, Jheyson; Alcázar Caicedo, Carolina; Quaedvlieg, Julia; Wadt, Lucia Helena O; Corvera, Ronald

2017-01-01

Understanding the factors that underlie the production of non-timber forest products (NTFPs), as well as regularly monitoring production levels, are key to allow sustainability assessments of NTFP extractive economies. Brazil nut (Bertholletia excelsa, Lecythidaceae) seed harvesting from natural forests is one of the cornerstone NTFP economies in Amazonia. In the Peruvian Amazon it is organized in a concession system. Drawing on seed production estimates of >135,000 individual Brazil nut trees from >400 concessions and ethno-ecological interviews with >80 concession holders, here we aimed to (i) assess the accuracy of seed production estimates by Brazil nut seed harvesters, and (ii) validate their traditional ecological knowledge (TEK) about the variables that influence Brazil nut production. We compared productivity estimates with actual field measurements carried out in the study area and found a positive correlation between them. Furthermore, we compared the relationships between seed production and a number of phenotypic, phytosanitary and environmental variables described in literature with those obtained for the seed production estimates and found high consistency between them, justifying the use of the dataset for validating TEK and innovative hypothesis testing. As expected, nearly all TEK on Brazil nut productivity was corroborated by our data. This is reassuring as Brazil nut concession holders, and NTFP harvesters at large, rely on their knowledge to guide the management of the trees upon which their extractive economies are based. Our findings suggest that productivity estimates of Brazil nut trees and possibly other NTFP-producing species could replace or complement actual measurements, which are very expensive and labour intensive, at least in areas where harvesters have a tradition of collecting NTFPs from the same trees over multiple years or decades. Productivity estimates might even be sourced from harvesters through registers on an annual basis, thus allowing a more cost-efficient and robust monitoring of productivity levels.

NTFP harvesters as citizen scientists: Validating traditional and crowdsourced knowledge on seed production of Brazil nut trees in the Peruvian Amazon

PubMed Central

Thomas, Evert; Valdivia, Jheyson; Alcázar Caicedo, Carolina; Quaedvlieg, Julia; Wadt, Lucia Helena O.; Corvera, Ronald

2017-01-01

Understanding the factors that underlie the production of non-timber forest products (NTFPs), as well as regularly monitoring production levels, are key to allow sustainability assessments of NTFP extractive economies. Brazil nut (Bertholletia excelsa, Lecythidaceae) seed harvesting from natural forests is one of the cornerstone NTFP economies in Amazonia. In the Peruvian Amazon it is organized in a concession system. Drawing on seed production estimates of >135,000 individual Brazil nut trees from >400 concessions and ethno-ecological interviews with >80 concession holders, here we aimed to (i) assess the accuracy of seed production estimates by Brazil nut seed harvesters, and (ii) validate their traditional ecological knowledge (TEK) about the variables that influence Brazil nut production. We compared productivity estimates with actual field measurements carried out in the study area and found a positive correlation between them. Furthermore, we compared the relationships between seed production and a number of phenotypic, phytosanitary and environmental variables described in literature with those obtained for the seed production estimates and found high consistency between them, justifying the use of the dataset for validating TEK and innovative hypothesis testing. As expected, nearly all TEK on Brazil nut productivity was corroborated by our data. This is reassuring as Brazil nut concession holders, and NTFP harvesters at large, rely on their knowledge to guide the management of the trees upon which their extractive economies are based. Our findings suggest that productivity estimates of Brazil nut trees and possibly other NTFP-producing species could replace or complement actual measurements, which are very expensive and labour intensive, at least in areas where harvesters have a tradition of collecting NTFPs from the same trees over multiple years or decades. Productivity estimates might even be sourced from harvesters through registers on an annual basis, thus allowing a more cost-efficient and robust monitoring of productivity levels. PMID:28837638

Loop-mediated isothermal DNA amplification for asymptomatic malaria detection in challenging field settings: Technical performance and pilot implementation in the Peruvian Amazon

PubMed Central

Serra-Casas, Elisa; Manrique, Paulo; Ding, Xavier C.; Carrasco-Escobar, Gabriel; Alava, Freddy; Gave, Anthony; Rodriguez, Hugo; Contreras-Mancilla, Juan; Rosas-Aguirre, Angel; Speybroeck, Niko; González, Iveth J.

2017-01-01

Background Loop-mediated isothermal DNA amplification (LAMP) methodology offers an opportunity for point-of-care (POC) molecular detection of asymptomatic malaria infections. However, there is still little evidence on the feasibility of implementing this technique for population screenings in isolated field settings. Methods Overall, we recruited 1167 individuals from terrestrial (‘road’) and hydric (‘riverine’) communities of the Peruvian Amazon for a cross-sectional survey to detect asymptomatic malaria infections. The technical performance of LAMP was evaluated in a subgroup of 503 samples, using real-time Polymerase Chain Reaction (qPCR) as reference standard. The operational feasibility of introducing LAMP testing in the mobile screening campaigns was assessed based on field-suitability parameters, along with a pilot POC-LAMP assay in a riverine community without laboratory infrastructure. Results LAMP had a sensitivity of 91.8% (87.7–94.9) and specificity of 91.9% (87.8–95.0), and the overall accuracy was significantly better among samples collected during road screenings than riverine communities (p≤0.004). LAMP-based diagnostic strategy was successfully implemented within the field-team logistics and the POC-LAMP pilot in the riverine community allowed for a reduction in the turnaround time for case management, from 12–24 hours to less than 5 hours. Specimens with haemolytic appearance were regularly observed in riverine screenings and could help explaining the hindered performance/interpretation of the LAMP reaction in these communities. Conclusions LAMP-based molecular malaria diagnosis can be deployed outside of reference laboratories, providing similar performance as qPCR. However, scale-up in remote field settings such as riverine communities needs to consider a number of logistical challenges (e.g. environmental conditions, labour-intensiveness in large population screenings) that can influence its optimal implementation. PMID:28982155

Predominance of asymptomatic and sub-microscopic infections characterizes the Plasmodium gametocyte reservoir in the Peruvian Amazon

PubMed Central

Contreras-Mancilla, Juan José; Ramirez, Roberson; Guzmán-Guzmán, Mitchel; Carrasco-Escobar, Gabriel; Llanos-Cuentas, Alejandro; Vinetz, Joseph M.

2017-01-01

Malaria transmission requires that Anopheles mosquitoes ingest Plasmodium gametocyte stages circulating in the human bloodstream. In the context of malaria elimination, understanding the epidemiology of gametocytes relative to all Plasmodium infections and the contribution of asymptomatic and sub-microscopic parasite carriers to the gametocyte reservoir is necessary, especially in low endemic settings with predominance of P.vivax. A 13-month longitudinal study was conducted in two communities (n = 1935 individuals) of Loreto Department, Peru, with five active screenings for Plasmodium infections and gametocyte stages by quantitative real-time PCR (qPCR) and reverse transcription (RT)-qPCR, respectively. Parasite prevalence by qPCR was 7.2% for P.vivax (n = 520/7235; range by survey 6.0%-8.1%) and 3.2% for P.falciparum (n = 235/7235; range by survey 0.4%-7.7%). Sub-microscopic infections accounted for 73.5% of P.vivax (range by survey 60%-89%) and almost the totality of P.falciparum cases. Gametocytes were found in 28.4% P.vivax infections (range by survey 18.7%-34.1%), with a peak of 61.5% in one community at the start of the transmission season. About 59.8% of all P.vivax gametocyte carriers were asymptomatic and 31.9% were sub-microscopic. Age patterns for gametocyte prevalence paralleled asexual stage infections and peaked among >15–25 year old individuals. Asexual parasite density was found to be the strongest predictor for P.vivax gametocyte presence in longitudinal multivariate analysis (odds ratio 2.33 [95% confidence interval 1.96, 2.78]; P<0.001). Despite significant differences in seasonality patterns and P.vivax prevalence found at the local scale, sub-microscopic and asymptomatic infections predominate and contribute significantly to the gametocyte reservoir in different communities of the Peruvian Amazon. Control and elimination campaigns need sensitive tools to detect all infections that escape routine malaria surveillance, which may contribute to maintain transmission in the region. PMID:28671944

DoD Global Emerging Infections System Annual Report, Fiscal Year 2000

DTIC Science & Technology

2000-01-01

partners in Peru , Bolivia, and Suriname and was conducted largely under the supervision of a CDC officer assigned to NMRCD. Surveillance in the Amazon ...pyrimethamine on the north coast of Peru . In the Amazon basin, resistance to both chloroquine and sulfadoxine-pyrimethamine is noted in the central Amazon ...the north coast and in the Amazon region, respectively.As a result of this work, Peru now has better and more up-to-date information on antimalarial

Climate change mitigation opportunities based on carbon footprint estimates of dietary patterns in Peru

PubMed Central

Larrea-Gallegos, Gustavo; Villanueva-Rey, Pedro; Gilardino, Alessandro

2017-01-01

Food consumption accounts for an important proportion of the world GHG emissions per capita. Previous studies have delved into the nature of dietary patterns, showing that GHG reductions can be achieved in diets if certain foods are consumed rather than other, more GHG intensive products. For instance, vegetarian and low-meat diets have proved to be less carbon intensive than diets that are based on ruminant meat. These environmental patterns, increasingly analyzed in developed nations, are yet to be assessed in countries liked Peru where food purchase represents a relatively high percentage of the average household expenditure, ranging from 38% to 51% of the same. Therefore, food consumption can be identified as a potential way to reduce GHG emissions in Peru. However, the Peruvian government lacks a specific strategy to mitigate emissions in this sector, despite the recent ratification of the Paris Accord. In view of this, the main objective of this study is to analyze the environmental impacts of a set of 47 Peruvian food diet profiles, including geographical and socioeconomic scenarios. In order to do this, Life Cycle Assessment was used as the methodological framework to obtain the overall impacts of the components in the dietary patterns observed and primary data linked to the composition of diets were collected from the Peruvian National Institute for Statistics (INEI). Life cycle inventories for the different products that are part of the Peruvian diet were obtained from a set of previous scientific articles and reports regarding food production. Results were computed using the IPCC 2013 assessment method to estimate GHG emissions. Despite variations in GHG emissions from a geographical perspective, no significant differences were observed between cities located in the three Peruvian natural regions (i.e., coast, Andes and Amazon basin). In contrast, there appears to be a strong, positive correlation between GHG emissions and social expenditure or academic status. When compared to GHG emissions computed in the literature for developed nations, where the average caloric intake is substantially higher, diet-related emissions in Peru were in the low range. Our results could be used as a baseline for policy support to align nutritional and health policies in Peru with the need to reduce the environmental impacts linked to food production. PMID:29145461

Climate change mitigation opportunities based on carbon footprint estimates of dietary patterns in Peru.

PubMed

Vázquez-Rowe, Ian; Larrea-Gallegos, Gustavo; Villanueva-Rey, Pedro; Gilardino, Alessandro

2017-01-01

Food consumption accounts for an important proportion of the world GHG emissions per capita. Previous studies have delved into the nature of dietary patterns, showing that GHG reductions can be achieved in diets if certain foods are consumed rather than other, more GHG intensive products. For instance, vegetarian and low-meat diets have proved to be less carbon intensive than diets that are based on ruminant meat. These environmental patterns, increasingly analyzed in developed nations, are yet to be assessed in countries liked Peru where food purchase represents a relatively high percentage of the average household expenditure, ranging from 38% to 51% of the same. Therefore, food consumption can be identified as a potential way to reduce GHG emissions in Peru. However, the Peruvian government lacks a specific strategy to mitigate emissions in this sector, despite the recent ratification of the Paris Accord. In view of this, the main objective of this study is to analyze the environmental impacts of a set of 47 Peruvian food diet profiles, including geographical and socioeconomic scenarios. In order to do this, Life Cycle Assessment was used as the methodological framework to obtain the overall impacts of the components in the dietary patterns observed and primary data linked to the composition of diets were collected from the Peruvian National Institute for Statistics (INEI). Life cycle inventories for the different products that are part of the Peruvian diet were obtained from a set of previous scientific articles and reports regarding food production. Results were computed using the IPCC 2013 assessment method to estimate GHG emissions. Despite variations in GHG emissions from a geographical perspective, no significant differences were observed between cities located in the three Peruvian natural regions (i.e., coast, Andes and Amazon basin). In contrast, there appears to be a strong, positive correlation between GHG emissions and social expenditure or academic status. When compared to GHG emissions computed in the literature for developed nations, where the average caloric intake is substantially higher, diet-related emissions in Peru were in the low range. Our results could be used as a baseline for policy support to align nutritional and health policies in Peru with the need to reduce the environmental impacts linked to food production.

Metagenomics Analysis of Microorganisms in Freshwater Lakes of the Amazon Basin.

PubMed

Toyama, Danyelle; Kishi, Luciano Takeshi; Santos-Júnior, Célio Dias; Soares-Costa, Andrea; de Oliveira, Tereza Cristina Souza; de Miranda, Fernando Pellon; Henrique-Silva, Flávio

2016-12-22

The Amazon Basin is the largest hydrographic basin on the planet, and the dynamics of its aquatic microorganisms strongly impact global biogeochemical cycles. However, it remains poorly studied. This metagenome project was performed to obtain a snapshot of prokaryotic microbiota from four important lakes in the Amazon Basin. Copyright © 2016 Toyama et al.

Global Economic Integration and Local Community Resilience: Road Paving and Rural Demographic Change in the Southwestern Amazon

ERIC Educational Resources Information Center

Perz, Stephen G.; Cabrera, Liliana; Carvalho, Lucas Araujo; Castillo, Jorge; Barnes, Grenville

2010-01-01

Recent years have witnessed an expansion in international investment in large-scale infrastructure projects with the goal of achieving global economic integration. We focus on one such project, the Inter-Oceanic Highway in the "MAP" region, a trinational frontier where Bolivia, Brazil, and Peru meet in the southwestern Amazon. We adopt a…

Demographic threats to the sustainability of Brazil nut exploitation.

PubMed

Peres, Carlos A; Baider, Claudia; Zuidema, Pieter A; Wadt, Lúcia H O; Kainer, Karen A; Gomes-Silva, Daisy A P; Salomão, Rafael P; Simões, Luciana L; Franciosi, Eduardo R N; Cornejo Valverde, Fernando; Gribel, Rogério; Shepard, Glenn H; Kanashiro, Milton; Coventry, Peter; Yu, Douglas W; Watkinson, Andrew R; Freckleton, Robert P

2003-12-19

A comparative analysis of 23 populations of the Brazil nut tree (Bertholletia excelsa) across the Brazilian, Peruvian, and Bolivian Amazon shows that the history and intensity of Brazil nut exploitation are major determinants of population size structure. Populations subjected to persistent levels of harvest lack juvenile trees less than 60 centimeters in diameter at breast height; only populations with a history of either light or recent exploitation contain large numbers of juvenile trees. A harvesting model confirms that intensive exploitation levels over the past century are such that juvenile recruitment is insufficient to maintain populations over the long term. Without management, intensively harvested populations will succumb to a process of senescence and demographic collapse, threatening this cornerstone of the Amazonian extractive economy.

Herbivores promote habitat specialization by trees in Amazonian forests.

PubMed

Fine, Paul V A; Mesones, Italo; Coley, Phyllis D

2004-07-30

In an edaphically heterogeneous area in the Peruvian Amazon, clay soils and nutrient-poor white sands each harbor distinctive plant communities. To determine whether a trade-off between growth and antiherbivore defense enforces habitat specialization on these two soil types, we conducted a reciprocal transplant study of seedlings of 20 species from six genera of phylogenetically independent pairs of edaphic specialist trees and manipulated the presence of herbivores. Clay specialist species grew significantly faster than white-sand specialists in both soil types when protected from herbivores. However, when unprotected, white-sand specialists dominated in white-sand forests and clay specialists dominated in clay forests. Therefore, habitat specialization in this system results from an interaction of herbivore pressure with soil type.

Chagas disease and globalization of the Amazon.

PubMed

Briceño-León, Roberto

2007-01-01

The increasing number of autochthonous cases of Chagas disease in the Amazon since the 1970s has led to fear that the disease may become a new public health problem in the region. This transformation in the disease's epidemiological pattern in the Amazon can be explained by environmental and social changes in the last 30 years. The current article draws on the sociological theory of perverse effects to explain these changes as the unwanted result of the shift from the "inward" development model prevailing until the 1970s to the "outward" model that we know as globalization, oriented by industrial forces and international trade. The current article highlights the implementation of five new patterns in agriculture, cattle-raising, mining, lumbering, and urban occupation that have generated changes in the environment and the traditional indigenous habitat and have led to migratory flows, deforestation, sedentary living, the presence of domestic animals, and changes in the habitat that facilitate colonization of human dwellings by vectors and the domestic and work-related transmission of the disease. The expansion of Chagas disease is thus a perverse effect of the globalization process in the Amazon.

The future of the Amazon: new perspectives from climate, ecosystem and social sciences.

PubMed

Betts, Richard A; Malhi, Yadvinder; Roberts, J Timmons

2008-05-27

The potential loss or large-scale degradation of the tropical rainforests has become one of the iconic images of the impacts of twenty-first century environmental change and may be one of our century's most profound legacies. In the Amazon region, the direct threat of deforestation and degradation is now strongly intertwined with an indirect challenge we are just beginning to understand: the possibility of substantial regional drought driven by global climate change. The Amazon region hosts more than half of the world's remaining tropical forests, and some parts have among the greatest concentrations of biodiversity found anywhere on Earth. Overall, the region is estimated to host about a quarter of all global biodiversity. It acts as one of the major 'flywheels' of global climate, transpiring water and generating clouds, affecting atmospheric circulation across continents and hemispheres, and storing substantial reserves of biomass and soil carbon. Hence, the ongoing degradation of Amazonia is a threat to local climate stability and a contributor to the global atmospheric climate change crisis. Conversely, the stabilization of Amazonian deforestation and degradation would be an opportunity for local adaptation to climate change, as well as a potential global contributor towards mitigation of climate change. However, addressing deforestation in the Amazon raises substantial challenges in policy, governance, sustainability and economic science. This paper introduces a theme issue dedicated to a multidisciplinary analysis of these challenges.

Child Health in the Peruvian Amazon: Prevalence and Factors Associated with Referred Morbidity and Health Care Access in the City of Iñapari

PubMed Central

Guimarães, Maria Gabriela Silva; Braña, Athos Muniz; Oliart-Guzmán, Humberto; Branco, Fernando Luiz Cunha Castelo; Delfino, Breno Matos; Pereira, Thasciany Moraes; Mantovani, Saulo Augusto Silva; Martins, Antonio Camargo; Santos, Ana Paula; Filgueira-Júnior, José Alcântara; Ramalho, Alanderson Alves; Guimarães, Andreia da Silva; Oliveira, Cristieli Sérgio de Menezes; de Araújo, Thiago Santos; Estrada, Carlos Hermógenes Manrique de Lara; Arróspide, Nancy; da Silva-Nunes, Mônica

2015-01-01

Introduction. Children under 5 years of age are more susceptible to developing morbidities such as diarrhea, respiratory infections, anemia, and malnutrition. The objective of the study is to evaluate the prevalence of reported morbidities in this age group in the city of Iñapari (Peru) and the access to health services in this municipality. Methods. Data collection using interviews that assessed socioeconomic and demographic conditions, child morbidity, and access to health services was performed in 2011. Statistical analysis was performed using SPSS 13.0. Results. Regarding morbidities that occurred during lifetime, 39.8% reported previous anemia and intestinal parasite infection. About 53.7% of the children reported any type of morbidities in the last 15 days before interview, being most frequent respiratory symptoms (38.9%), diarrhea (23,4%), and fever (23,1%). Only 63.1% of those reporting recent morbidities sought health care. These morbidities were associated with precarious sanitation and lack of infrastructure, the presence of other comorbidities, and poor access to health services. Conclusion. The main referred morbidities in Amazonian Peruvian children were diarrhea, respiratory symptoms, anemia, and vomiting. Incentives and improvements in the health and sanitation conditions would be important measures to improve the quality of life of the Amazonian child population. PMID:26640493

Utilizing GNSS Reflectometry to Assess Surface Inundation Dynamics in Tropical Wetlands

NASA Astrophysics Data System (ADS)

Jensen, K.; McDonald, K. C.; Podest, E.; Chew, C. C.

2017-12-01

Tropical wetlands play a significant role in global atmospheric methane and terrestrial water storage. Despite the growing number of remote sensing products from satellite sensors, both spatial distribution and temporal variability of wetlands remain highly uncertain. An emerging innovative approach to mapping wetlands is offered by GNSS reflectometry (GNSS-R), a bistatic radar concept that takes advantage of GNSS transmitting satellites to yield observations with global coverage and rapid revisit time. This technology offers the potential to capture dynamic inundation changes in wetlands at higher temporal fidelity and sensitivity under the canopy than presently possible. We present an integrative analysis of radiometric modeling, ground measurements, and several microwave remote sensing datasets traditionally used for wetland observations. From a theoretical standpoint, GNSS-R sensitivities for vegetation and wetlands are investigated with a bistatic radar model in order to understand the interactions of the signal with various land surface components. GNSS reflections from the TechDemoSat-1 (TDS-1), Soil Moisture Active Passive (SMAP), and Cyclone GNSS (CYGNSS) missions are tested experimentally with contemporaneous (1) field measurements collected from the Pacaya Samiria National Reserve in the Peruvian Amazon, (2) imaging radar from Sentinel-1 and PALSAR-2 observed over a variety of tropical wetland systems, and (3) pan-tropical coarse-resolution (25km) microwave datasets (Surface Water Microwave Product Series). We find that GNSS-R data provide the potential to extend capabilities of current remote sensing techniques to characterize surface inundation extent, and we explore how to maximize synergism between different satellite sensors to produce an enhanced wetland monitoring product.

Methane airborne measurements and comparison to global models during BARCA

NASA Astrophysics Data System (ADS)

Beck, Veronika; Chen, Huilin; Gerbig, Christoph; Bergamaschi, Peter; Bruhwiler, Lori; Houweling, Sander; Röckmann, Thomas; Kolle, Olaf; Steinbach, Julia; Koch, Thomas; Sapart, Célia J.; van der Veen, Carina; Frankenberg, Christian; Andreae, Meinrat O.; Artaxo, Paulo; Longo, Karla M.; Wofsy, Steven C.

2012-08-01

Tropical regions, especially the Amazon region, account for large emissions of methane (CH4). Here, we present CH4 observations from two airborne campaigns conducted within the BARCA (Balanço Atmosférico Regional de Carbono na Amazônia) project in the Amazon basin in November 2008 (end of the dry season) and May 2009 (end of the wet season). We performed continuous measurements of CH4 onboard an aircraft for the first time in the Amazon region, covering the whole Amazon basin with over 150 vertical profiles between altitudes of 500 m and 4000 m. The observations support the finding of previous ground-based, airborne, and satellite measurements that the Amazon basin is a large source of atmospheric CH4. Isotope analysis verified that the majority of emissions can be attributed to CH4 emissions from wetlands, while urban CH4 emissions could be also traced back to biogenic origin. A comparison of five TM5 based global CH4 inversions with the observations clearly indicates that the inversions using SCIAMACHY observations represent the BARCA observations best. The calculated CH4 flux estimate obtained from the mismatch between observations and TM5-modeled CH4 fields ranges from 36 to 43 mg m-2 d-1 for the Amazon lowland region.

Improving simulated spatial distribution of productivity and biomass in Amazon forests using the ACME land model

NASA Astrophysics Data System (ADS)

Yang, X.; Thornton, P. E.; Ricciuto, D. M.; Shi, X.; Xu, M.; Hoffman, F. M.; Norby, R. J.

2017-12-01

Tropical forests play a crucial role in the global carbon cycle, accounting for one third of the global NPP and containing about 25% of global vegetation biomass and soil carbon. This is particularly true for tropical forests in the Amazon region, as it comprises approximately 50% of the world's tropical forests. It is therefore important for us to understand and represent the processes that determine the fluxes and storage of carbon in these forests. In this study, we show that the implementation of phosphorus (P) cycle and P limitation in the ACME Land Model (ALM) improves simulated spatial pattern of NPP. The P-enabled ALM is able to capture the west-to-east gradient of productivity, consistent with field observations. We also show that by improving the representation of mortality processes, ALM is able to reproduce the observed spatial pattern of above ground biomass across the Amazon region.

76 FR 19993 - Granting of Request for Early Termination of the Waiting Period Under the Premerger Notification...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-04-11

... 03/23/2011 20110137 G Amazon.com , Inc.; Quidsi, Inc.; Amazon.com , Inc. 20110603 G Ares Corporate Opportunities Fund III, L.P.; Global Defense Technology & Systems, Inc.; Ares Corporate Opportunities Fund III...

Campaign datasets for Observations and Modeling of the Green Ocean Amazon (GOAMAZON)

DOE Data Explorer

Martin,Scot; Mei,Fan; Alexander,Lizabeth; Artaxo,Paulo; Barbosa,Henrique; Bartholomew,Mary Jane; Biscaro,Thiago; Buseck,Peter; Chand,Duli; Comstock,Jennifer; Dubey,Manvendra; Godstein,Allen; Guenther,Alex; Hubbe,John; Jardine,Kolby; Jimenez,Jose-Luis; Kim,Saewung; Kuang,Chongai; Laskin,Alexander; Long,Chuck; Paralovo,Sarah; Petaja,Tuukka; Powers,Heath; Schumacher,Courtney; Sedlacek,Arthur; Senum,Gunnar; Smith,James; Shilling,John; Springston,Stephen; Thayer,Mitchell; Tomlinson,Jason; Wang,Jian; Xie,Shaocheng

2016-05-30

The hydrologic cycle of the Amazon Basin is one of the primary heat engines of the Southern Hemisphere. Any accurate climate model must succeed in a good description of the Basin, both in its natural state and in states perturbed by regional and global human activities. At the present time, however, tropical deep convection in a natural state is poorly understood and modeled, with insufficient observational data sets for model constraint. Furthermore, future climate scenarios resulting from human activities globally show the possible drying and the eventual possible conversion of rain forest to savanna in response to global climate change. Based on our current state of knowledge, the governing conditions of this catastrophic change are not defined. Human activities locally, including the economic development activities that are growing the population and the industry within the Basin, also have the potential to shift regional climate, most immediately by an increment in aerosol number and mass concentrations, and the shift is across the range of values to which cloud properties are most sensitive. The ARM Climate Research Facility in the Amazon Basin seeks to understand aerosol and cloud life cycles, particularly the susceptibility to cloud aerosol precipitation interactions, within the Amazon Basin.

Antimicrobial activity of some medicinal barks used in Peruvian Amazon.

PubMed

Kloucek, P; Svobodova, B; Polesny, Z; Langrova, I; Smrcek, S; Kokoska, L

2007-05-04

The aim of this study was to evaluate the antimicrobial activity of six barks traditionally used in Callería District (Ucayali Department, Peru) for treating conditions likely to be associated with microorganisms. Ethanol extracts of stem barks of Abuta grandifolia (Menispermaceae), Dipteryx micrantha (Leguminosae), Cordia alliodora (Boraginaceae), Naucleopsis glabra (Moraceae), Pterocarpus rohrii (Leguminosae), and root bark of Maytenus macrocarpa (Celastraceae) were tested against nine bacteria and one yeast using the broth microdilution method. All plants possessed significant antimicrobial effect, however, the extract of Naucleopsis glabra exhibited the strongest activity against Gram-positive bacteria (MICs ranging from 62.5 to 125 microg/ml), while the broadest spectrum of action was shown by the extract of Maytenus macrocarpa, which inhibited all the strains tested with MICs ranging from 125 to 250 microg/ml.

[Globalization and environmentalism: polyphonic ethnicities in the Amazon].

PubMed

Garnelo, Luiza; Sampaio, Sully

2005-01-01

The article examines the issue of globalization, along with its contradictions and the ways in which it guides and shapes specific situations within the Amazon's present-day reality, while simultaneously engendering the uniformization of economic production and the valorization of cultural differences. The discussion explores the nuances of implementing a massified, standardized productive base that paradoxically fosters the valorization of cultural differences and favors alliances between, on the one hand, ethno-political leaders from indigenous Amazon groups and, on the other, environmentalists and other transworld actors who wield strong decision-making power. The article analyzes the indigenous movement's network of alliances and highlights the polyphony of the different political agents that come to clash with each other within this post-modern geopolitical setting.

Elevated Mercury Concentrations in Humans of Madre de Dios, Peru

PubMed Central

Ashe, Katy

2012-01-01

The enormous increase in practically unregulated mining in Madre de Dios Peru is leading to massive release of liquid elemental mercury to the environment. Rapidly increasing global prices for gold are causing a massive upsurge in artisanal mining in the Peruvian Amazon, considered to be one of the most biodiverse places on the planet. This study identifies the current levels of mercury in the human population, through identifying levels of total mercury in human hair in mining zones of Madre de Dios Department and in the nearby city of Puerto Maldonado. A regression analysis reveals that fish consumption, gender, and location of residence were significant indicators of mercury levels; while duration of residence and age had no significant relationship to mercury levels. Increased fish consumption levels were the strongest indicators of increased total mercury levels across the entire population. The levels of total mercury in hair was significantly (α = 0.05) higher in mining zones, than Puerto Maldonado. In both areas men had significantly higher levels than women, likely due to a difference in metabolism or varying levels of direct involvement in gold mining- a male predominated industry. This is the first study to show the health threat that mercury poses to this region, however further research needs to be done to gain a more refined understanding of the predominant routes of exposure in this population. PMID:22438911

Elevated mercury concentrations in humans of Madre de Dios, Peru.

PubMed

Ashe, Katy

2012-01-01

The enormous increase in practically unregulated mining in Madre de Dios Peru is leading to massive release of liquid elemental mercury to the environment. Rapidly increasing global prices for gold are causing a massive upsurge in artisanal mining in the Peruvian Amazon, considered to be one of the most biodiverse places on the planet. This study identifies the current levels of mercury in the human population, through identifying levels of total mercury in human hair in mining zones of Madre de Dios Department and in the nearby city of Puerto Maldonado. A regression analysis reveals that fish consumption, gender, and location of residence were significant indicators of mercury levels; while duration of residence and age had no significant relationship to mercury levels. Increased fish consumption levels were the strongest indicators of increased total mercury levels across the entire population. The levels of total mercury in hair was significantly (α = 0.05) higher in mining zones, than Puerto Maldonado. In both areas men had significantly higher levels than women, likely due to a difference in metabolism or varying levels of direct involvement in gold mining- a male predominated industry. This is the first study to show the health threat that mercury poses to this region, however further research needs to be done to gain a more refined understanding of the predominant routes of exposure in this population.

Temporal variability in methane fluxes from tropical peatlands within the Peruvian Amazon

NASA Astrophysics Data System (ADS)

Murphy, Wayne; Berrio, Juan Carlos; Boom, Arnoud; Page, Sue; Arn Teh, Yit

2016-04-01

Tropical peatlands are one of the largest soil carbon (C) reservoirs globally and play a significant role in modulating fluxes of C between the tropical biosphere and atmosphere. These C fluxes are of global importance because tropical wetlands are the single largest natural source of atmospheric methane (CH4); while land-use change and biomass burning also contribute to the growing global atmospheric carbon dioxide (CO2) burden. Amazonian peatlands play a potentially important role in regional and global atmospheric budgets of C because of their large extent. These ecosystems cover an estimated 150,000km2, which is roughly three-quarters the size of Indonesian peatlands; the world's most extensive and well-studied tropical peatlands. Here we report CH4 fluxes from a lowland tropical peatland in the Pastaza-Maranon foreland basin in Peru, one of the largest peatland complexes in the lowland Amazon Basin. Strong prolonged seasonal rainfall events and the annual Amazon River flood-pulse may lead to pronounced temporal variability in biogeochemical cycling and trace gas fluxes, and this study explored how CH4 fluxes varied among wet and dry season periods in a number of key vegetation types in this region. Sampling was concentrated in 3 of the most numerically-dominant vegetation types: Forested Swamp, Mixed Palm Swamp and Mauritia flexuosa-dominated Palm Swamp, with data collection occurring in both wet and dry seasons over a 2 year period from 2012-2014 (4 field campaigns in total). Overall mean CH4 fluxes from the Forested Swamp, Mixed Palm Swamp and Mauritia flexuosa-dominated Palm Swamp for the entire sampling period were 31.06 ± 3.42 mg CH4 - C m-2 d-1, 52.03 ± 16.05 mg CH4 - C m-2 d-1 and 36.68 ± 4.32 mg CH4 - C m-2 d-1. CH4 emissions, when averaged across the entire dataset, did not differ significantly among habitats. However, when CH4 emissions were aggregated by season, the Mixed Palm Swamp showed a significantly different emissions from all other habitats (Fischers LSD, P<0.0001). All of the vegetation types showed pronounced seasonality in CH4 fluxes. Mean dry and wet season fluxes for the Forested Swamp were 18.82 ± 2.61 mg CH4 - C m-2 d-1 and 60.42 ± 9.11 mg CH4 - C m-2 d-1; 85.51 ± 26.36 mg CH4 - C m-2 d-1 and 5.15 ± 2.73 mg CH4 - C m-2 d-1 for the Mixed Palm Swamp; and 25.54 ± 2.9 mg CH4 - C m-2 d-1 and 53.36 ± 9.78 mg CH4 - C m-2 d-1 for the Mauritia flexuosa-dominated Palm Swamp. Dry season fluxes did not differ from each other between years. In contrast, wet season fluxes showed significant differences between years, with CH4 emissions in the 2012 wet season more than double the emissions from the 2014 year. These observed differences in CH4 emissions during different seasons suggest that seasonal variability in water availability and flooding is a key control on CH4 emissions from Amazonian peatlands.

Long-term decline of the Amazon carbon sink.

PubMed

Brienen, R J W; Phillips, O L; Feldpausch, T R; Gloor, E; Baker, T R; Lloyd, J; Lopez-Gonzalez, G; Monteagudo-Mendoza, A; Malhi, Y; Lewis, S L; Vásquez Martinez, R; Alexiades, M; Álvarez Dávila, E; Alvarez-Loayza, P; Andrade, A; Aragão, L E O C; Araujo-Murakami, A; Arets, E J M M; Arroyo, L; Aymard C, G A; Bánki, O S; Baraloto, C; Barroso, J; Bonal, D; Boot, R G A; Camargo, J L C; Castilho, C V; Chama, V; Chao, K J; Chave, J; Comiskey, J A; Cornejo Valverde, F; da Costa, L; de Oliveira, E A; Di Fiore, A; Erwin, T L; Fauset, S; Forsthofer, M; Galbraith, D R; Grahame, E S; Groot, N; Hérault, B; Higuchi, N; Honorio Coronado, E N; Keeling, H; Killeen, T J; Laurance, W F; Laurance, S; Licona, J; Magnussen, W E; Marimon, B S; Marimon-Junior, B H; Mendoza, C; Neill, D A; Nogueira, E M; Núñez, P; Pallqui Camacho, N C; Parada, A; Pardo-Molina, G; Peacock, J; Peña-Claros, M; Pickavance, G C; Pitman, N C A; Poorter, L; Prieto, A; Quesada, C A; Ramírez, F; Ramírez-Angulo, H; Restrepo, Z; Roopsind, A; Rudas, A; Salomão, R P; Schwarz, M; Silva, N; Silva-Espejo, J E; Silveira, M; Stropp, J; Talbot, J; ter Steege, H; Teran-Aguilar, J; Terborgh, J; Thomas-Caesar, R; Toledo, M; Torello-Raventos, M; Umetsu, R K; van der Heijden, G M F; van der Hout, P; Guimarães Vieira, I C; Vieira, S A; Vilanova, E; Vos, V A; Zagt, R J

2015-03-19

Atmospheric carbon dioxide records indicate that the land surface has acted as a strong global carbon sink over recent decades, with a substantial fraction of this sink probably located in the tropics, particularly in the Amazon. Nevertheless, it is unclear how the terrestrial carbon sink will evolve as climate and atmospheric composition continue to change. Here we analyse the historical evolution of the biomass dynamics of the Amazon rainforest over three decades using a distributed network of 321 plots. While this analysis confirms that Amazon forests have acted as a long-term net biomass sink, we find a long-term decreasing trend of carbon accumulation. Rates of net increase in above-ground biomass declined by one-third during the past decade compared to the 1990s. This is a consequence of growth rate increases levelling off recently, while biomass mortality persistently increased throughout, leading to a shortening of carbon residence times. Potential drivers for the mortality increase include greater climate variability, and feedbacks of faster growth on mortality, resulting in shortened tree longevity. The observed decline of the Amazon sink diverges markedly from the recent increase in terrestrial carbon uptake at the global scale, and is contrary to expectations based on models.

[Ground-clearing fires in the amazon and respiratory disease].

PubMed

Gonçalves, Karen dos Santos; de Castro, Hermano Albuquerque; Hacon, Sandra de Souza

2012-06-01

The intentional burning of forest biomass commonly known as "ground-clearing fires" is an age-old and widespread practice in the country and is seen as a major contributor to global emissions of greenhouse gases. However, global awareness of their potential impact is relatively recent. The occurrence of large ground-clearing fires in the Brazilian and international scenarios drew attention to the problem, but the measures taken to prevent and/or control the fires are still insufficient. In the Amazon region, with distinct geographical and environmental features from the rest of the country, with its historic process of land occupation, every year the ground-clearing fires expose larger portions of the population making them vulnerable to its effects. In this context, this non-systematic review presents the papers written over the past five years about the fires in the Brazilian Amazon and respiratory illness. The main objective is to provide information for managers and leaders on environmental issues about the problems related to biomass burning in the Amazon region.

[Evaluation of peruvian money test in screening of cognitive impairment among older adults].

PubMed

Oscanoa, Teodoro J; Cieza, Edwin; Parodi, José F; Paredes, Napoleón

2016-03-01

Objectives To evaluate the Peruvian adaptation of the money test (Eurotest) for identifying cognitive impairment among >60-year-old adults. Materials and methods This is a phase I study of diagnostic test, with a convenience sampling and calculation of the test´s sensitivity and specificity, based on a pretest prevalence of 50%. The criteria of the Diagnostic and Statistical Manual of Mental Disorders (DSM IV) and Global Deterioration Scale (GDS) were used for the operational definition of patients with cognitive impairment. Receiver operating characteristic (ROC) curve analysis was used to identify the optimal cut-off value. Results The study evaluated 42 cases and 42 controls; there was no significant difference between age (77.88 ± 6.01 years vs. 6.49 76.14 ± years) and years of education (13.69 ± 3.70 years vs. 8.17 ± 4.71 years). The Peruvian version of the Eurotest has a sensitivity of 90.5% and specificity of 83.3% with cut-off value of 24. Conclusions The Peruvian adapted version of the Eurotest, called prueba de la moneda peruana could be useful in screening for cognitive impairment among older adults.

Is mercury from small-scale gold mining prevalent in the southeastern Peruvian Amazon?

PubMed

Moreno-Brush, Mónica; Rydberg, Johan; Gamboa, Nadia; Storch, Ilse; Biester, Harald

2016-11-01

There is an ongoing debate on the fate of mercury (Hg) in areas affected by artisanal and small-scale gold mining (ASGM). Over the last 30 years, ASGM has released 69 tons of Hg into the southeastern Peruvian Amazon. To investigate the role of suspended matter and hydrological factors on the fate of ASGM-Hg, we analysed riverbank sediments and suspended matter along the partially ASGM-affected Malinowski-Tambopata river system and examined Hg accumulation in fish. In addition, local impacts of atmospheric Hg emissions on aquatic systems were assessed by analysing a sediment core from an oxbow lake. Hg concentrations in riverbank sediments are lower (20-53 ng g -1 ) than in suspended matter (∼400-4000 ng g -1 ) due to differences in particle size. Elevated Hg concentrations in suspended matter from ASGM-affected river sections (∼1400 vs. ∼30-120 ng L -1 in unaffected sections) are mainly driven by the increased amount of suspended matter rather than increased Hg concentrations in the suspended matter. The oxbow lake sediment record shows low Hg concentrations (64-86 ng g -1 ) without evidence of any ASGM-related increase in atmospheric Hg input. Hg flux variations are mostly an effect of variations in sediment accumulation rates. Moreover, only 5% of the analysed fish (only piscivores) exceed WHO recommendations for human consumption (500 ng g -1 ). Our findings show that ASGM-affected river sections in the Malinowski-Tambopata system do not exhibit increased Hg accumulation, indicating that the released Hg is either retained at the spill site or transported to areas farther away from the ASGM areas. We suspect that the fate of ASGM-Hg in such tropical rivers is mainly linked to transport associated with the suspended matter, especially during high water situations. We assume that our findings are typical for ASGM-affected areas in tropical regions and could explain why aquatic systems in such ASGM regions often show comparatively modest enrichment in Hg levels. Copyright © 2016 Elsevier Ltd. All rights reserved.

Antiprotozoal activity of medicinal plants used by Iquitos-Nauta road communities in Loreto (Peru).

PubMed

Vásquez-Ocmín, Pedro; Cojean, Sandrine; Rengifo, Elsa; Suyyagh-Albouz, Soulaf; Amasifuen Guerra, Carlos A; Pomel, Sébastien; Cabanillas, Billy; Mejía, Kember; Loiseau, Philippe M; Figadère, Bruno; Maciuk, Alexandre

2018-01-10

In the Peruvian Amazon, the use of medicinal plants is a common practice. However, there is few documented information about the practical aspects of their use and few scientific validation. The starting point for this work was a set of interviews of people living in rural communities from the Peruvian Amazon about their uses of plants. Protozoan diseases are a public health issue in the Amazonian communities, who partly cope with it by using traditional remedies. Validation of these traditional practices contributes to public health care efficiency and may help identify new antiprotozoal compounds. to inventory and validate the use of medicinal plants by rural people of Loreto region. Rural mestizos were interviewed about traditional medication of parasite infections with medicinal plants. Ethnopharmacological surveys were undertaken in two villages along Iquitos-Nauta road (Loreto region, Peru), namely 13 de Febrero and El Dorado communities. Forty-six plants were collected according to their traditional use for the treatment of parasitic diseases, 50 ethanolic extracts (different parts for some of the plants) were tested in vitro on Plasmodium falciparum (3D7 sensitive strain and W2 chloroquine resistant strain), Leishmania donovani LV9 strain and Trypanosoma brucei gambiense. Cytotoxic assessment (HUVEC cells) of the active extracts was performed. Two of the most active plants were submitted to preliminary bioguided fractionation to ascertain and explore their activities. From the initial plants list, 10 were found to be active on P. falciparum, 15 on L. donovani and 2 on the three parasites. The ethanolic extract from Costus curvibracteatus (Costaceae) leaves and Grias neuberthii (Lecythidaceae) bark showed strong in vitro activity on P. falciparum (sensitive and resistant strain) and L. donovani and moderate activity on T. brucei gambiense. The Amazonian forest communities in Peru represents a source of knowledge on the use of medicinal plants. In this work, several extracts with antiprotozoal activity were identified. This work contributes to validate some traditional uses and opens subsequent investigations on active compounds isolation and identification. Copyright © 2017 Elsevier B.V. All rights reserved.

Anemia and malnutrition in indigenous children and adolescents of the Peruvian Amazon in a context of lead exposure: a cross-sectional study.

PubMed

Anticona, Cynthia; San Sebastian, Miguel

2014-01-01

Indigenous children and adolescents of the Peruvian Amazon live in precarious conditions that could increase the risk of malnutrition. A particular problem in the Corrientes river communities is the high exposure to lead among children and adolescents. This study aimed to determine the nutritional status of children and adolescents in indigenous communities in the Corrientes river basin and examine risk factors for anemia, stunting, underweight, and wasting. This was a cross-sectional assessment in children and adolescents aged 0-17 years from six communities (n=330). Data collection included measurement of hemoglobin levels, anthropometrics, blood lead levels (BLLs); a parental questionnaire including demographic and dwelling information; parents' occupation; and the child's duration of breastfeeding and food consumption. Analysis included univariate, bivariate, and logistic regression. Overall, anemia prevalence was 51.0%, stunting (proxy for chronic malnutrition) 50.0%, and underweight 20.0%. Bivariate analysis showed that anemia and underweight prevalence was higher in the 0-4 years group (p<0.05). No association was found between anemia, stunting, or underweight with gender, community exposure to oil activity, or consumption of river water. Stunting prevalence was higher in the group whose BLLs were >5 µg/dL (p<0.05). In the logistic regression analysis, no variable was associated with anemia or underweight. The group 5-11 years and >12 years had 1.9 and 3.1 times higher risk of stunting than the group under five years, respectively. Children and adolescents with BLLs >5 µg/dL had twice the risk of stunting compared to those with lower BLLs. Half of the study population was found with anemia and stunting. Anemia was more prevalent in the 0- to 5-year age group and stunting in the 12- to 17-year group. The association between stunting and BLLs might be attributed to a direct effect of lead on human growth. Also, poor nutrition and other socioeconomic-related factors may contribute to the simultaneous existence of stunting and elevated BLLs.

Anemia and malnutrition in indigenous children and adolescents of the Peruvian Amazon in a context of lead exposure: a cross-sectional study

PubMed Central

Anticona, Cynthia; San Sebastian, Miguel

2014-01-01

Background Indigenous children and adolescents of the Peruvian Amazon live in precarious conditions that could increase the risk of malnutrition. A particular problem in the Corrientes river communities is the high exposure to lead among children and adolescents. Objective This study aimed to determine the nutritional status of children and adolescents in indigenous communities in the Corrientes river basin and examine risk factors for anemia, stunting, underweight, and wasting. Design This was a cross-sectional assessment in children and adolescents aged 0–17 years from six communities (n=330). Data collection included measurement of hemoglobin levels, anthropometrics, blood lead levels (BLLs); a parental questionnaire including demographic and dwelling information; parents’ occupation; and the child's duration of breastfeeding and food consumption. Analysis included univariate, bivariate, and logistic regression. Results Overall, anemia prevalence was 51.0%, stunting (proxy for chronic malnutrition) 50.0%, and underweight 20.0%. Bivariate analysis showed that anemia and underweight prevalence was higher in the 0–4 years group (p<0.05). No association was found between anemia, stunting, or underweight with gender, community exposure to oil activity, or consumption of river water. Stunting prevalence was higher in the group whose BLLs were >5 µg/dL (p<0.05). In the logistic regression analysis, no variable was associated with anemia or underweight. The group 5–11 years and >12 years had 1.9 and 3.1 times higher risk of stunting than the group under five years, respectively. Children and adolescents with BLLs >5 µg/dL had twice the risk of stunting compared to those with lower BLLs. Conclusions Half of the study population was found with anemia and stunting. Anemia was more prevalent in the 0- to 5-year age group and stunting in the 12- to 17-year group. The association between stunting and BLLs might be attributed to a direct effect of lead on human growth. Also, poor nutrition and other socioeconomic-related factors may contribute to the simultaneous existence of stunting and elevated BLLs. PMID:24560254

Microsatellite data suggest significant population structure and differentiation within the malaria vector Anopheles darlingi in Central and South America.

PubMed

Mirabello, Lisa; Vineis, Joseph H; Yanoviak, Stephen P; Scarpassa, Vera M; Póvoa, Marinete M; Padilla, Norma; Achee, Nicole L; Conn, Jan E

2008-03-26

Anopheles darlingi is the most important malaria vector in the Neotropics. An understanding of A. darlingi's population structure and contemporary gene flow patterns is necessary if vector populations are to be successfully controlled. We assessed population genetic structure and levels of differentiation based on 1,376 samples from 31 localities throughout the Peruvian and Brazilian Amazon and Central America using 5-8 microsatellite loci. We found high levels of polymorphism for all of the Amazonian populations (mean RS = 7.62, mean HO = 0.742), and low levels for the Belize and Guatemalan populations (mean RS = 4.3, mean HO = 0.457). The Bayesian clustering analysis revealed five population clusters: northeastern Amazonian Brazil, southeastern and central Amazonian Brazil, western and central Amazonian Brazil, Peruvian Amazon, and the Central American populations. Within Central America there was low non-significant differentiation, except for between the populations separated by the Maya Mountains. Within Amazonia there was a moderate level of significant differentiation attributed to isolation by distance. Within Peru there was no significant population structure and low differentiation, and some evidence of a population expansion. The pairwise estimates of genetic differentiation between Central America and Amazonian populations were all very high and highly significant (FST = 0.1859 - 0.3901, P < 0.05). Both the DA and FST distance-based trees illustrated the main division to be between Central America and Amazonia. We detected a large amount of population structure in Amazonia, with three population clusters within Brazil and one including the Peru populations. The considerable differences in Ne among the populations may have contributed to the observed genetic differentiation. All of the data suggest that the primary division within A. darlingi corresponds to two white gene genotypes between Amazonia (genotype 1) and Central America, parts of Colombia and Venezuela (genotype 2), and are in agreement with previously published mitochondrial COI gene sequences interpreted as incipient species. Overall, it appears that two main factors have contributed to the genetic differentiation between the population clusters: physical distance between the populations and the differences in effective population sizes among the subpopulations.

Improving Oil Palm Classification in the Peruvian Amazon by Combining Active and Passive Remote Sensing Data

NASA Astrophysics Data System (ADS)

Gutierrez-Velez, V. H.; DeFries, R. S.

2011-12-01

Oil palm expansion has led to clearing of extensive forest areas in the tropics. However quantitative assessments of the magnitude of oil palm expansion to deforestation have been challenging due in large part to the limitations presented by conventional optical data sets for discriminating plantations from forests and other tree cover vegetations. Recently available information from active remote sensors has opened the possibility of using these data sources to overcome these limitations. The purpose of this analysis is to evaluate the accuracy of oil palm classification when using ALOS/PALSAR active satellite data in conjunction with Landsat information, compared to the use of Landsat data only. The analysis takes place in a focused region around the city of Pucallpa in the Ucayali province of the Peruvian Amazon for the year 2010. Oil palm plantations were separated in five categories consisting of four age classes (0-3, 3-5, 5-10 and > 10 yrs) and an additional class accounting for degraded plantations older than 15 yr. Other land covers were water bodies, unvegetated land, short and tall grass, fallow, secondary vegetation, and forest. Classifications were performed using random forests. Training points for calibration and validation consisted of 411 polygons measured in areas representative of the land covers of interest and totaled 6,367 ha. Overall classification accuracy increased from 89.9% using only Landsat data sets to 94.3% using both Landast and ALOS/PALSAR. Both user's and producer's accuracy increased in all classes when using both data sets except for producer's accuracy in short grass which decreased by 1%. The largest increase in user's accuracy was obtained in oil palm plantations older than 10 years from 62 to 80% while producer's accuracy improved the most in plantations in age class 3-5 from 63 to 80%. Results demonstrate the suitability of data from ALOS/PALSAR and other active remote sensors to improve classification of oil palm plantations in age classes and discriminate them from other land covers. Results suggest a potential for improving discrimination of other tree cover types using a combination of active and conventional optical remote sensors.

Amazonian and neotropical plant communities on glacial time-scales: The failure of the aridity and refuge hypotheses

NASA Astrophysics Data System (ADS)

Colinvaux, P. A.; De Oliveira, P. E.; Bush, M. B.

2000-01-01

Plants respond to Pleistocene climatic change as species, not as associations or biomes. This has been demonstrated unequivocally by paleobotanical data for temperate latitudes. In the far richer vegetations of the tropics species populations also fluctuated independently in response to climatic forcing, from their longlasting glacial states to the patterns of brief interglacials like the present and back again. We use pollen data to reconstruct the vegetation of the Amazon basin in oxygen isotope stages 3 and 2 of the last glaciation in order to measure how the plant populations of the Amazon responded to the global warming at the onset of the Holocene. We find that plant communities of the neotropics vent copious pollen to lake sediments and that this pollen yields powerful signals for community composition. Three continuous sedimentary records reaching through oxygen isotope stage 2 are available from the Amazon lowlands, those from Carajas, Lake Pata and marine deposits off the mouth of the Amazon River. All three records yield pollen histories of remarkable constancy and stability. By comparing them with deposits of equal antiquity from the cerrado (savanna) of central Brazil, we show that most of the Amazon lowlands remained under forest throughout a glacial cycle. This forest was never fragmented by open vegetation as postulated by the refugia hypothesis. Instead the intact forest of glacial times included significant populations of plants that are now montane, suggesting that the global warming of the early Holocene resulted in the expulsion of heat intolerant plants from the lowland forest. Pollen data from the Amazonian flank of the Andes and from Pacific Panama provide evidence that populations of these heat intolerant plants survive the heat of interglacials in part by maintaining large populations at cooler montane altitudes. Our conclusion that the Amazon lowlands were forested in glacial times specifically refutes the hypothesis of Amazonian glacial aridity. Accordingly we examine the geomorphological evidence for glacial aridity and find it wanting. Of the three paleodune systems reported for tropical South America, that of NE Brazil was active in the Holocene as well as the Pleistocene. Parts of NE Brazil were actually moister than now in late-glacial times. Paleodunes in the Pantanal have never been seen on the ground, and those in the Orinoco Llanos are undated and may be of any age since the Tertiary. Arkosic sands in the Amazon fan deposits came from the Andean foothills or from down cutting by rivers and cannot be evidence of a former arid land surface. White sands of Amazonia formed as podzols, not by aeolian activity. Such Amazonian stone lines as have received critical scrutiny are concretionary pisolites in stratigraphic formations that are more than ten million years old. Although the Amazon was never arid, modeling cooler glacial tropics gives plausibility to a somewhat drier Amazon in glacial times, a concept given substance by pollen data for the movement of ecotones in Rondonia, by stream histories in the Bolivian Andes, and by evidence for lowered lake levels at Carajas and Lake Pata. But this reduced precipitation was never enough to fragment the forest in the Amazon lowlands themselves. Pleistocene mammals of the Napo river valley in Ecuador were able to live along the river system in a forested landscape. Our data suggest that the Amazon forests have been stable since the start of the Pleistocene, a fact that has contributed to the storage of vast diversity. The coming anthropogenic global warming and CO 2 enrichment will add to the global warming already endured by Amazon biota in the Holocene. We think it possible that the expulsion from the lowland forests of heat intolerant species is already complete and that the forest property of maintaining its own microhabitat will allow the high species richness to survive more global warming, provided large enough tracts of forest are preserved.

Proceedings of the Department of Defense (DoD) Symposium. DoD Entomology: Global, Diverse, and Improving Public Health

DTIC Science & Technology

2010-12-14

Parasitology in the Amazon city of Iquitos, Peru , where NAMRU-6 has 90 permanent field and laboratory staff. Over 10 years of research have focused on...laboratory in Iquitos, Peru , a city of approximately 380,000 people (INEI 2008) in the Amazon Basin (Figures 3 and 4). The mission of NAMRU-6 is... Amazon Malaria Initiative and a military-to-military training program in Peru , Ecuador, and Colombia (Figure 5). NAMRU-6 Entomology has been

Installation and operation of a large scale RAPS system in Peru

NASA Astrophysics Data System (ADS)

Cole, J. F.

In 1997, International Lead Zinc Research Organization Inc. (ILZRO), Solar Energy Industries Association (SEIA), and the Ministry of Energy and Mines (MEM) of Peru signed a Memorandum of Understanding to facilitate the installation of hybrid remote area power supply (RAPS) systems in the Amazon region of Peru. Many remote villages in this vast region have either no or limited electricity supplied by diesel generators running a few hours per day. Subsequently, ILZRO sponsored the engineering design of the hybrid RAPS system and SEIA supported a socio-economic study to determine the sustainability of such systems and the locations for pilot installations. In mid-1998, the Peruvian government approved the design of the system. ILZRO then began efforts to obtain governmental and inter-governmental funding to supplement its own funds to underwrite the cost of manufacture and installation of the systems in two villages in the Amazon region. Additional major funding has been received from the Global Environmental Facility (GEF) administered by the United Nations Development Program (UNDP) and from the Common Fund for Commodities (CFC). Funds have also been received from the US Department of Energy, the International Greenhouse Partnership (Australia) and the Peruvian government. The RAPS system consists of modules designed to provide 150 kW h per day of utility grade ac electricity over a 24 h period. Each module contains a diesel generator, battery bank using heavy-duty 2 V VRLA GEL batteries, a battery charger, a photovoltaic array and an ac/dc inverter. The batteries and electrical components are housed in modified shipping containers. The modules can be installed with a new generator or retrofitted to an existing generator. The charging and discharging regime of the batteries has been recommended by a study carried out by CSIRO, which has simulated the RAPS operation. The system will employ a partial-state-of-charge (PSOC) regime in order to optimize the life of the batteries, which have a projected life of 8-10 years. A remote monitoring system will consist of a satellite link between each of the remote area power systems and one or more central hosts. The system operator will be able to obtain actual operational status of the system and will be able to change set points and to force operation of certain functions in order to test the system. Preliminary cost analyses indicate that such RAPS systems are more economically attractive to provide electricity to remote villages than other alternatives, including 24 h diesel generation and grid extension. The past 5 years have provided a number of lessons learned, particularly related to dealing with government agencies in a developing country, overcoming logistical problems such as shipping long distances and dealing with difficult climate and terrain. Despite difficulties encountered, the promise of RAPS systems as a rapidly growing market for lead-acid batteries appears to be bright given the demand for sustainable remote electrification.

Formation of a katabatic induced cold front at the east Andean slopes

NASA Astrophysics Data System (ADS)

Trachte, K.; Nauss, T.,; Rollenbeck, R.; Bendix, J.

2009-04-01

Within the DFG research unit 816, climate dynamics in a tropical mountain rain forest in the national reserve of the Reserva Biósfera de San Francisco in South Ecuador are investigated. Precipitation measurements in the mountain environment of the Estación Científica de San Francisco (ECSF) with a vertical rain radar profiler have been made over the last seven years. They reveal unexpected constant early morning rainfall events. On the basis of cloud top temperatures from corresponding GOES satellite imageries, a Mesoscale Convective System could be derived. Its formation region is located south-east of the ECSF in the Peruvian Amazon basin. The generation of the MCS is assumed to results from an interaction of both local and mesoscale conditions. Nocturnal drainage air from the Andean slopes and valleys confluences in the Amazon basin due to the concave lined terrain. This cold air converges with the warm-moist air of the Amazon inducing a local cold front. This process yields to deep convection resulting in a MCS. With the numerical model ARPS the hypothesized formation of a cloud cluster due to a katabatic induced cold front is shown in an ideal case study. Therefor an ideal terrain model representing the features of the Andes in the target area has been used. The simplification of the oprography concerns a concave lined slope and a valley draining into the basin. It describes the confluence of the cold drainage air due to the shape of the terrain. Inside the basin the generation of a local cold front is shown, which triggers the formation of a cloud cluster.

A validated agent-based model to study the spatial and temporal heterogeneities of malaria incidence in the rainforest environment.

PubMed

Pizzitutti, Francesco; Pan, William; Barbieri, Alisson; Miranda, J Jaime; Feingold, Beth; Guedes, Gilvan R; Alarcon-Valenzuela, Javiera; Mena, Carlos F

2015-12-22

The Amazon environment has been exposed in the last decades to radical changes that have been accompanied by a remarkable rise of both Plasmodium falciparum and Plasmodium vivax malaria. The malaria transmission process is highly influenced by factors such as spatial and temporal heterogeneities of the environment and individual-based characteristics of mosquitoes and humans populations. All these determinant factors can be simulated effectively trough agent-based models. This paper presents a validated agent-based model of local-scale malaria transmission. The model reproduces the environment of a typical riverine village in the northern Peruvian Amazon, where the malaria transmission is highly seasonal and apparently associated with flooding of large areas caused by the neighbouring river. Agents representing humans, mosquitoes and the two species of Plasmodium (P. falciparum and P. vivax) are simulated in a spatially explicit representation of the environment around the village. The model environment includes: climate, people houses positions and elevation. A representation of changes in the mosquito breeding areas extension caused by the river flooding is also included in the simulation environment. A calibration process was carried out to reproduce the variations of the malaria monthly incidence over a period of 3 years. The calibrated model is also able to reproduce the spatial heterogeneities of local scale malaria transmission. A "what if" eradication strategy scenario is proposed: if the mosquito breeding sites are eliminated through mosquito larva habitat management in a buffer area extended at least 200 m around the village, the malaria transmission is eradicated from the village. The use of agent-based models can reproduce effectively the spatiotemporal variations of the malaria transmission in a low endemicity environment dominated by river floodings like in the Amazon.

Interannual variability of a precipitation gradient along the semi-arid catchment areas for the metropolitan region of Lima- Peru in relation to atmospheric circulation at the mesoscale

NASA Astrophysics Data System (ADS)

Otto, Marco; Seidel, Jochen; Trachte, Katja

2013-04-01

The main moisture source for precipitation on the western slopes of the Central Andes is located east of the mountain range known as the Amazon basin. However, the Andean mountains, which reach up to 6000 m a.s.l., strongly influence climatic conditions along the Pacific coastline of South America as a climatic barrier for the low-level tropospheric flow and associated moisture transport from the Amazon basin. Additional, large scale subsidence caused by the South Pacific High inhabits convective rainfall at the Pacific coast where large metropolitan areas such as the Peruvian capital Lima are located. Two contrasts in precipitation can be found while crossing the Andean mountains from West to East. On the Pacific coast, at the location of the metropolitan area of Lima, no more than 10 mm mean annual rainfall occurs. In contrast, up to 1000 mm mean annual rainfall occur only 100 km east of Lima within the upper region (4000 m .a.s.l.) of the Western Cordillera. The transition takes place along the western slopes of the Western Cordillera and is characterised by a strong precipitation gradient. Here, catchment areas are located that provide most of the water resources needed to sustain an urban area of approximately 10 million people. This study investigates the interannual variability of the precipitation gradient between 1998 and 2012. The analysis is based on daily precipitation data of 22 rain gauge station, daily rainfall data of the Tropical Rainfall Mission (TRMM 3B42) at 0.25 degrees and reanalysis data at 36 km spatial resolution at the mesoscale. The reanalysis data was produced using the Weather Research and Forecasting Model. Station data was provided by the Peruvian weather service during the project "Sustainable Water and Wastewater Management in Urban Growth Centres Coping with Climate Change - Concepts for Lima Metropolitana (Peru) (LiWa)", which is financed by the German Federal Ministry of Education and Research (BMBF). We are interested in the following questions. How is the interannual variability of the observed precipitation gradient related to atmospheric circulation east (Amazon basin) and west (south-east Pacific) of the study region? If those relations are quantifiable, are there any forecast potentials for the characteristics of the precipitation gradient during the raining season? The results of the study provide valuable information needed to understand the generation of rainfall in the frame of a case study for the largest metropolitan area that is located at the arid Pacific coast of Peru. This information may also be useful for local managers in order to optimise water resource management and land use strategies.

Extratropical Respones to Amazon Deforestation

NASA Astrophysics Data System (ADS)

Badger, A.; Dirmeyer, P.

2014-12-01

Land-use change (LUC) is known to impact local climate conditions through modifications of land-atmosphere interactions. Large-scale LUC, such as Amazon deforestation, could have a significant effect on the local and regional climates. The question remains as to what the global impact of large-scale LUC could be, as previous modeling studies have shown non-local responses due to Amazon deforestation. A common shortcoming in many previous modeling studies is the use of prescribed ocean conditions, which can act as a boundary condition to dampen the global response with respect to changes in the mean and variability. Using fully coupled modeling simulations with the Community Earth System Model version 1.2.0, the Amazon rainforest has been replaced with a distribution of representative tropical crops. Through the modifications of local land-atmosphere interactions, a significant change in the region, both at the surface and throughout the atmosphere, can be quantified. Accompanying these local changes are significant changes to the atmospheric circulation across all scales, thus modifying regional climates in other locales. Notable impacts include significant changes in precipitation, surface fluxes, basin-wide sea surface temperatures and ENSO behavior.

A Limnological Examination of the Southwestern Amazon, Madre de Dios, Peru

NASA Astrophysics Data System (ADS)

Belcon, Alana Urnesha

This dissertation investigates the limnology of the southwestern Peruvian Amazon centered on the Madre de Dios department by examining first the geomorphology and then the ecology and biogeochemistry of the region's fluvial systems. Madre de Dios, Peru is world renowned for its prolific biodiversity and its location within the Andes biodiversity hotspot. It is also a site of study regarding the development of the Fitzcarrald Arch and that feature's geomorphological importance as the drainage center for the headwaters of the Madeira River---the Amazon's largest tributary and as well as its role as a physical divider of genetic evolution in the Amazon. Though each of these has been studied by a variety of prominent researchers, the ability to investigate all the aspects of this unique region is hampered by the lack of a regional geomorphological map. This study aims to fill that gap by using remote sensing techniques on digital elevation models, satellite imagery and soil, geology and geoecological maps already in publication to create a geomorphological map. The resulting map contains ten distinct landform types that exemplify the dominance of fluvial processes in shaping this landscape. The river terraces of the Madre de Dios River are delineated in their entirety as well as the various dissected relief units and previously undefined units. The demarcation of the boundaries of these geomorphic units will provide invaluable assistance to the selection of field sites by future researchers as well as insights into the origin of the high biodiversity indices of this region and aid in planning for biodiversity conservation. Secondly this study examines 25 tropical floodplain lakes along 300 km of the Manu River within the Manu National Park in the Madre de Dios department. Alternative stable state and regime shifts in shallow lakes typically have been examined in lakes in temperate and boreal regions and within anthropogenically disturbed basins but have rarely been studied in tropical or in undisturbed regions. In contrast this study focuses on a tropical region of virtually no human disturbance and evaluates the effects of hydrological variability on ecosystem structure and dynamics. Using satellite imagery a 23 yr timeline of ecological regime shifts in Amazon oxbow lakes or "cochas" is reconstructed. The study shows that almost 25% of the river's floodplain lakes experience periodic abrupt vegetative changes with an average 3.4% existing in an alternative stable state in any given year. State changes typically occur from a stable phytoplankton-dominated state to a short lived, <3 yr, floating macrophytic state and often occur independent of regional flooding. We theorize that multiple dynamics, both internal and external, drive vegetative regime shifts in the Manu but insufficient data yet exists in this remote region to identify the key processes. To complete the investigation of tropical limnology the third study compares and contrasts the nutrient-productivity ration of floodplain and non-floodplain lakes globally and regionally. For over 70 years a strong positive relationship between sestonic chlorophyll-a (Chl-a) and total phosphorus (TP) has been established with phosphorus generally viewed as the most limiting factor to productivity. Most of these studies, however, have focused on northern, temperate regions where the lakes are typically postglacial, isolated and fed by small streams. Relatively little work has been done on floodplain lakes which are semi or permanently connected to the river. This study examines the relationship between nutrients and productivity in floodplain lakes globally through an extensive literature synthesis. Values for total phosphorus, total nitrogen and chlorophyll-a were collected for 523 floodplain lakes, represented by 288 data points while 551 data points were collected for 5444 non-floodplain lakes. Analysis revealed that globally, floodplain lakes do not show any significant difference in the total phosphorus/chlorophyll-a relationship from that found in non-floodplain lakes but significant differences are seen between tropical and temperate lakes. We propose that the term 'floodplain' lake should serve as purely a geographical descriptor and that it is lacking as an ecological indicator. Instead factors such as precipitation seasonality, hydrological connectivity and regional flooding regimes are better indicators of high or low productivity in floodplain lakes.

HPV vaccine knowledge and acceptability among Peruvian men who have sex with men and transgender women: A pilot, qualitative study.

PubMed

Galea, Jerome T; Monsour, Emmi; Nureña, César R; Blas, Magaly M; Brown, Brandon

2017-01-01

Human papillomavirus (HPV) is the most common sexually transmitted infection globally and is responsible for a variety of cancers in men and women. An effective HPV vaccine licensed for use in girls and boys has been indicated for-but is not widely implemented in-men who have sex with men (MSM). Limited data are available for transgender women (TW). We explored the social and behavioral aspects related to HPV vaccine uptake and participation in HPV vaccine studies among Peruvian MSM and TW. Focus groups and individual in-depth interviews were conducted to obtain the knowledge, thoughts, and opinions from Peruvian MSM and TW regarding HPV vaccination. Data were analyzed using systematic comparative and descriptive content analysis. Three focus groups and fifteen individual in-depth interviews were conducted among 36 MSM and TW. Participant mean age was 26 years (range 18-40). Though many participants were unfamiliar with HPV vaccination, most expressed positive attitudes. Participants expressed concerns about the potential for stigma when disclosing HPV vaccination. Peruvian MSM and TW felt that HPV vaccination would be acceptable to themselves and their peers. Nonetheless, vaccine intake may be impeded by potential stigma. Findings from this study may guide HPV vaccine implementation in similar populations.

HPV vaccine knowledge and acceptability among Peruvian men who have sex with men and transgender women: A pilot, qualitative study

PubMed Central

Monsour, Emmi; Nureña, César R.; Blas, Magaly M.; Brown, Brandon

2017-01-01

Purpose Human papillomavirus (HPV) is the most common sexually transmitted infection globally and is responsible for a variety of cancers in men and women. An effective HPV vaccine licensed for use in girls and boys has been indicated for—but is not widely implemented in—men who have sex with men (MSM). Limited data are available for transgender women (TW). We explored the social and behavioral aspects related to HPV vaccine uptake and participation in HPV vaccine studies among Peruvian MSM and TW. Methods Focus groups and individual in-depth interviews were conducted to obtain the knowledge, thoughts, and opinions from Peruvian MSM and TW regarding HPV vaccination. Data were analyzed using systematic comparative and descriptive content analysis. Results Three focus groups and fifteen individual in-depth interviews were conducted among 36 MSM and TW. Participant mean age was 26 years (range 18–40). Though many participants were unfamiliar with HPV vaccination, most expressed positive attitudes. Participants expressed concerns about the potential for stigma when disclosing HPV vaccination. Conclusion Peruvian MSM and TW felt that HPV vaccination would be acceptable to themselves and their peers. Nonetheless, vaccine intake may be impeded by potential stigma. Findings from this study may guide HPV vaccine implementation in similar populations. PMID:28245234

Surface Freshwater Storage and Variability in the Amazon Basin from Multi-Satellite Observations, 1993-2007

NASA Technical Reports Server (NTRS)

Papa, Fabrice; Frappart, Frederic; Guntner, Andreas; Prigent, Catherine; Aires, Filipe; Getirana, Augusto; Maurer, Raffael

2013-01-01

The amount of water stored and moving through the surface water bodies of large river basins (river, floodplains, wetlands) plays a major role in the global water and biochemical cycles and is a critical parameter for water resources management. However, the spatio-temporal variations of these freshwater reservoirs are still widely unknown at the global scale. Here, we propose a hypsographic curve approach to estimate surface freshwater storage variations over the Amazon basin combining surface water extent from a multi-satellite-technique with topographic data from the Global Digital Elevation Model (GDEM) from Advance Spaceborne Thermal Emission and Reflection Radiometer (ASTER). Monthly surface water storage variations for 1993-2007 are presented, showing a strong seasonal and interannual variability, and are evaluated against in situ river discharge and precipitation. The basin-scale mean annual amplitude of approx. 1200 cu km is in the range of previous estimates and contributes to about half of the Gravity Recovery And Climate Experiment (GRACE) total water storage variations. For the first time, we map the surface water volume anomaly during the extreme droughts of 1997 (October-November) and 2005 (September-October) and found that during these dry events the water stored in the river and flood-plains of the Amazon basin was, respectively, approx. 230 (approx. 40%) and 210 (approx. 50%) cu km below the 1993-2007 average. This new 15year data set of surface water volume represents an unprecedented source of information for future hydrological or climate modeling of the Amazon. It is also a first step toward the development of such database at the global scale.

Using an Expedition Storyline, Baseline Data, Multiple Partnerships and a Varied Outreach Strategy to Engage Diverse Audiences in Geoscience Discourse: A Case Study on the Rio Maranon, Peru

NASA Astrophysics Data System (ADS)

Hill, A. F.; Goode, J. R.; Kramer, N. R.

2016-12-01

Growing energy demands in mountain regions motivate hydropower development on remote rivers previously not pursued due to difficult access and challenging terrain. These same physical factors have in part resulted in a dearth of data needed to understand these important water resources and the river systems as a whole. Resource management decisions not founded on data-driven science can not evaluate river system sustainability; decisions regarding the fate of globally important environmental resources without public awareness and discourse are missed opportunities to leverage international perspectives and lessons learned on the process. In the summer of 2015, we launched a 620 km, 30-day river expedition on the headwater stem of the Amazon River, Peru's Rio Maranon, to collect a baseline dataset as a start to filling this data gap on this river under threat from major hydropower development. We conducted a longitudinal characterization from Rio Maranon's Peruvian Andes headwaters to its lower lying Amazon jungle basin including continuous data collection on water quality, source water isotopes and invertebrate samples. A central focus of this project included outreach to broad audiences for public awareness and conservation advocacy of this critical river corridor at risk of imminent disconnection across ecosystems from dams. Outreach strategies were multi-pronged to encompass different audiences, including: a short-format documentary film, publicly available online data, oral presentations, magazine articles, blog posts and a science-education childrens' book highlighting both the adventure of the expedition and the female-dominated science team. Initiating non-traditional partnerships has been a key component of the project success given the minimal budget, including continuing partnerships with National Geographic, the Natural History Museum of Peru, Adventurers for Science and Conservation, Sierra Rios recreational river outfitter, Maranon Waterkeeper and the Centro de Capacitación en Conservación y Desarrollo Sostenible (CDS). Our diverse outreach approach illustrates the potential for using basic datasets to ignite - and partnerships to facilitate - geoscience communication and environmental education, especially in the context of multi-faceted natural resource issues.

The ambiguity of drought events, a bottleneck for Amazon forest drought response modelling

NASA Astrophysics Data System (ADS)

De Deurwaerder, Hannes; Verbeeck, Hans; Baker, Timothy; Christoffersen, Bradley; Ciais, Philippe; Galbraith, David; Guimberteau, Matthieu; Kruijt, Bart; Langerwisch, Fanny; Meir, Patrick; Rammig, Anja; Thonicke, Kirsten; Von Randow, Celso; Zhang, Ke

2016-04-01

Considering the important role of the Amazon forest in the global water and carbon cycle, the prognosis of altered hydrological patterns resulting from climate change provides strong incentive for apprehending the direct implications of drought on the vegetation of this ecosystem. Dynamic global vegetation models have the potential of providing a useful tool to study drought impacts on various spatial and temporal scales. This however assumes the models being able to properly represent drought impact mechanisms. But how well do the models succeed in meeting this assumption? Within this study meteorological driver data and model output data of 4 different DGVMs, i.e. ORCHIDEE, JULES, INLAND and LPGmL, are studied. Using the palmer drought severity index (PDSI) and the mean cumulative water deficit (MWD), temporal and spatial representation of drought events are studied in the driver data and are referenced to historical extreme drought events in the Amazon. Subsequently, within the resulting temporal and spatial frame, we studied the drought impact on the above ground biomass (AGB) and gross primary production (GPP) fluxes. Flux tower data, field inventory data and the JUNG data-driven GPP product for the Amazon region are used for validation. Our findings not only suggest that the current state of the studied DGVMs is inadequate in representing Amazon droughts in general, but also highlights strong inter-model differences in drought responses. Using scatterplot-studies and input-output correlations, we provide insight in the origin of these encountered inter-model differences. In addition, we present directives of model development and improvement in scope of Amazon forest drought response modelling.

Amazon Basin climate under global warming: the role of the sea surface temperature.

PubMed

Harris, Phil P; Huntingford, Chris; Cox, Peter M

2008-05-27

The Hadley Centre coupled climate-carbon cycle model (HadCM3LC) predicts loss of the Amazon rainforest in response to future anthropogenic greenhouse gas emissions. In this study, the atmospheric component of HadCM3LC is used to assess the role of simulated changes in mid-twenty-first century sea surface temperature (SST) in Amazon Basin climate change. When the full HadCM3LC SST anomalies (SSTAs) are used, the atmosphere model reproduces the Amazon Basin climate change exhibited by HadCM3LC, including much of the reduction in Amazon Basin rainfall. This rainfall change is shown to be the combined effect of SSTAs in both the tropical Atlantic and the Pacific, with roughly equal contributions from each basin. The greatest rainfall reduction occurs from May to October, outside of the mature South American monsoon (SAM) season. This dry season response is the combined effect of a more rapid warming of the tropical North Atlantic relative to the south, and warm SSTAs in the tropical east Pacific. Conversely, a weak enhancement of mature SAM season rainfall in response to Atlantic SST change is suppressed by the atmospheric response to Pacific SST. This net wet season response is sufficient to prevent dry season soil moisture deficits from being recharged through the SAM season, leading to a perennial soil moisture reduction and an associated 30% reduction in annual Amazon Basin net primary productivity (NPP). A further 23% NPP reduction occurs in response to a 3.5 degrees C warmer air temperature associated with a global mean SST warming.

Rainfall and its seasonality over the Amazon in the 21st century as assessed by the coupled models for the IPCC AR4

NASA Astrophysics Data System (ADS)

Li, Wenhong; Fu, Rong; Dickinson, Robert E.

2006-01-01

The global climate models for the Intergovernmental Panel on Climate Change Fourth Assessment Report (IPCC AR4) predict very different changes of rainfall over the Amazon under the SRES A1B scenario for global climate change. Five of the eleven models predict an increase of annual rainfall, three models predict a decrease of rainfall, and the other three models predict no significant changes in the Amazon rainfall. We have further examined two models. The UKMO-HadCM3 model predicts an El Niño-like sea surface temperature (SST) change and warming in the northern tropical Atlantic which appear to enhance atmospheric subsidence and consequently reduce clouds over the Amazon. The resultant increase of surface solar absorption causes a stronger surface sensible heat flux and thus reduces relative humidity of the surface air. These changes decrease the rate and length of wet season rainfall and surface latent heat flux. This decreased wet season rainfall leads to drier soil during the subsequent dry season, which in turn can delay the transition from the dry to wet season. GISS-ER predicts a weaker SST warming in the western Pacific and the southern tropical Atlantic which increases moisture transport and hence rainfall in the Amazon. In the southern Amazon and Nordeste where the strongest rainfall increase occurs, the resultant higher soil moisture supports a higher surface latent heat flux during the dry and transition season and leads to an earlier wet season onset.

DNA Metabarcoding of Amazonian Ichthyoplankton Swarms.

PubMed

Maggia, M E; Vigouroux, Y; Renno, J F; Duponchelle, F; Desmarais, E; Nunez, J; García-Dávila, C; Carvajal-Vallejos, F M; Paradis, E; Martin, J F; Mariac, C

2017-01-01

Tropical rainforests harbor extraordinary biodiversity. The Amazon basin is thought to hold 30% of all river fish species in the world. Information about the ecology, reproduction, and recruitment of most species is still lacking, thus hampering fisheries management and successful conservation strategies. One of the key understudied issues in the study of population dynamics is recruitment. Fish larval ecology in tropical biomes is still in its infancy owing to identification difficulties. Molecular techniques are very promising tools for the identification of larvae at the species level. However, one of their limits is obtaining individual sequences with large samples of larvae. To facilitate this task, we developed a new method based on the massive parallel sequencing capability of next generation sequencing (NGS) coupled with hybridization capture. We focused on the mitochondrial marker cytochrome oxidase I (COI). The results obtained using the new method were compared with individual larval sequencing. We validated the ability of the method to identify Amazonian catfish larvae at the species level and to estimate the relative abundance of species in batches of larvae. Finally, we applied the method and provided evidence for strong temporal variation in reproductive activity of catfish species in the Ucayalí River in the Peruvian Amazon. This new time and cost effective method enables the acquisition of large datasets, paving the way for a finer understanding of reproductive dynamics and recruitment patterns of tropical fish species, with major implications for fisheries management and conservation.

Genome scanning of Amazonian Plasmodium falciparum shows subtelomeric instability and clindamycin-resistant parasites

PubMed Central

Dharia, Neekesh V.; Plouffe, David; Bopp, Selina E.R.; González-Páez, Gonzalo E.; Lucas, Carmen; Salas, Carola; Soberon, Valeria; Bursulaya, Badry; Kochel, Tadeusz J.; Bacon, David J.; Winzeler, Elizabeth A.

2010-01-01

Here, we fully characterize the genomes of 14 Plasmodium falciparum patient isolates taken recently from the Iquitos region using genome scanning, a microarray-based technique that delineates the majority of single-base changes, indels, and copy number variants distinguishing the coding regions of two clones. We show that the parasite population in the Peruvian Amazon bears a limited number of genotypes and low recombination frequencies. Despite the essentially clonal nature of some isolates, we see high frequencies of mutations in subtelomeric highly variable genes and internal var genes, indicating mutations arising during self-mating or mitotic replication. The data also reveal that one or two meioses separate different isolates, showing that P. falciparum clones isolated from different individuals in defined geographical regions could be useful in linkage analyses or quantitative trait locus studies. Through pairwise comparisons of different isolates we discovered point mutations in the apicoplast genome that are close to known mutations that confer clindamycin resistance in other species, but which were hitherto unknown in malaria parasites. Subsequent drug sensitivity testing revealed over 100-fold increase of clindamycin EC50 in strains harboring one of these mutations. This evidence of clindamycin-resistant parasites in the Amazon suggests that a shift should be made in health policy away from quinine + clindamycin therapy for malaria in pregnant women and infants, and that the development of new lincosamide antibiotics for malaria should be reconsidered. PMID:20829224

Landscape-scale consequences of differential tree mortality from catastrophic wind disturbance in the Amazon.

PubMed

Rifai, Sami W; Urquiza Muñoz, José D; Negrón-Juárez, Robinson I; Ramírez Arévalo, Fredy R; Tello-Espinoza, Rodil; Vanderwel, Mark C; Lichstein, Jeremy W; Chambers, Jeffrey Q; Bohlman, Stephanie A

2016-10-01

Wind disturbance can create large forest blowdowns, which greatly reduces live biomass and adds uncertainty to the strength of the Amazon carbon sink. Observational studies from within the central Amazon have quantified blowdown size and estimated total mortality but have not determined which trees are most likely to die from a catastrophic wind disturbance. Also, the impact of spatial dependence upon tree mortality from wind disturbance has seldom been quantified, which is important because wind disturbance often kills clusters of trees due to large treefalls killing surrounding neighbors. We examine (1) the causes of differential mortality between adult trees from a 300-ha blowdown event in the Peruvian region of the northwestern Amazon, (2) how accounting for spatial dependence affects mortality predictions, and (3) how incorporating both differential mortality and spatial dependence affect the landscape level estimation of necromass produced from the blowdown. Standard regression and spatial regression models were used to estimate how stem diameter, wood density, elevation, and a satellite-derived disturbance metric influenced the probability of tree death from the blowdown event. The model parameters regarding tree characteristics, topography, and spatial autocorrelation of the field data were then used to determine the consequences of non-random mortality for landscape production of necromass through a simulation model. Tree mortality was highly non-random within the blowdown, where tree mortality rates were highest for trees that were large, had low wood density, and were located at high elevation. Of the differential mortality models, the non-spatial models overpredicted necromass, whereas the spatial model slightly underpredicted necromass. When parameterized from the same field data, the spatial regression model with differential mortality estimated only 7.5% more dead trees across the entire blowdown than the random mortality model, yet it estimated 51% greater necromass. We suggest that predictions of forest carbon loss from wind disturbance are sensitive to not only the underlying spatial dependence of observations, but also the biological differences between individuals that promote differential levels of mortality. © 2016 by the Ecological Society of America.

Ethnic spirituality, gender and health care in the Peruvian Amazon.

PubMed

Espinosa, M Cristina

2009-10-01

By addressing ethnic identities of riparian people in Loreto, this article shows the relevance of spirituality, ethnic difference, and gender subordination affecting health interventions. Ethnic spirituality defines daily life behavior and attitudes revealing different meanings associated with medicine, illness, and healing. Gender segregates natural spaces and portrays women and children as more vulnerable to illness caused by spiritual powers, imposing taboos, and regulations. Due to lesser exposure to the modern outside world, adult women remain less familiar with it, even though modernity is also present in the village and reinterpreted by local ethnic views. Women seem closer to ethnic beliefs that 'color' their views and attitudes toward modern medicine and for that reason experience higher levels of discrimination and subordination. Being the principal care takers, their views and attitudes on medicine, illness, and healing are extremely important to consider. In practice, women and their ethnic views on medicine and illness usually remain invisible.

Airborne laser-guided imaging spectroscopy to map forest trait diversity and guide conservation.

PubMed

Asner, G P; Martin, R E; Knapp, D E; Tupayachi, R; Anderson, C B; Sinca, F; Vaughn, N R; Llactayo, W

2017-01-27

Functional biogeography may bridge a gap between field-based biodiversity information and satellite-based Earth system studies, thereby supporting conservation plans to protect more species and their contributions to ecosystem functioning. We used airborne laser-guided imaging spectroscopy with environmental modeling to derive large-scale, multivariate forest canopy functional trait maps of the Peruvian Andes-to-Amazon biodiversity hotspot. Seven mapped canopy traits revealed functional variation in a geospatial pattern explained by geology, topography, hydrology, and climate. Clustering of canopy traits yielded a map of forest beta functional diversity for land-use analysis. Up to 53% of each mapped, functionally distinct forest presents an opportunity for new conservation action. Mapping functional diversity advances our understanding of the biosphere to conserve more biodiversity in the face of land use and climate change. Copyright © 2017, American Association for the Advancement of Science.

Infection of Laboratory-Colonized Anopheles darlingi Mosquitoes by Plasmodium vivax

PubMed Central

Moreno, Marta; Tong, Carlos; Guzmán, Mitchel; Chuquiyauri, Raul; Llanos-Cuentas, Alejandro; Rodriguez, Hugo; Gamboa, Dionicia; Meister, Stephan; Winzeler, Elizabeth A.; Maguina, Paula; Conn, Jan E.; Vinetz, Joseph M.

2014-01-01

Anopheles darlingi Root is the most important malaria vector in the Amazonia region of South America. However, continuous propagation of An. darlingi in the laboratory has been elusive, limiting entomological, genetic/genomic, and vector–pathogen interaction studies of this mosquito species. Here, we report the establishment of an An. darlingi colony derived from wild-caught mosquitoes obtained in the northeastern Peruvian Amazon region of Iquitos in the Loreto Department. We show that the numbers of eggs, larvae, pupae, and adults continue to rise at least to the F6 generation. Comparison of feeding Plasmodium vivax ex vivo of F4 and F5 to F1 generation mosquitoes showed the comparable presence of oocysts and sporozoites, with numbers that corresponded to blood-stage asexual parasitemia and gametocytemia, confirming P. vivax vectorial capacity in the colonized mosquitoes. These results provide new avenues for research on An. darlingi biology and study of An. darlingi–Plasmodium interactions. PMID:24534811

Infection of laboratory-colonized Anopheles darlingi mosquitoes by Plasmodium vivax.

PubMed

Moreno, Marta; Tong, Carlos; Guzmán, Mitchel; Chuquiyauri, Raul; Llanos-Cuentas, Alejandro; Rodriguez, Hugo; Gamboa, Dionicia; Meister, Stephan; Winzeler, Elizabeth A; Maguina, Paula; Conn, Jan E; Vinetz, Joseph M

2014-04-01

Anopheles darlingi Root is the most important malaria vector in the Amazonia region of South America. However, continuous propagation of An. darlingi in the laboratory has been elusive, limiting entomological, genetic/genomic, and vector-pathogen interaction studies of this mosquito species. Here, we report the establishment of an An. darlingi colony derived from wild-caught mosquitoes obtained in the northeastern Peruvian Amazon region of Iquitos in the Loreto Department. We show that the numbers of eggs, larvae, pupae, and adults continue to rise at least to the F6 generation. Comparison of feeding Plasmodium vivax ex vivo of F4 and F5 to F1 generation mosquitoes showed the comparable presence of oocysts and sporozoites, with numbers that corresponded to blood-stage asexual parasitemia and gametocytemia, confirming P. vivax vectorial capacity in the colonized mosquitoes. These results provide new avenues for research on An. darlingi biology and study of An. darlingi-Plasmodium interactions.

Off-Farm Work among Rural Households: A Case Study in the Brazilian Amazon

ERIC Educational Resources Information Center

VanWey, Leah; Vithayathil, Trina

2013-01-01

This article analyzes off-farm work among subsistence-level farmers in the Santarem region of the Brazilian Amazon. We build on the literature on rural livelihoods in the Global South by exploring how the opportunity to work off the farm is embedded in social relationships. We additionally differentiate our analysis by type of off-farm work, and…

Modeling biomass burning emissions for Amazon forest and pastures in Rondônia, Brazil.

Treesearch

Liane S. Guild; J. Boone Kauffman; Warren B. Cohen; Christine A. Hlavka; Darold E. Ward

2004-01-01

As a source of atmospheric carbon, biomass burning emissions associated with deforestation in the Amazon are globally significant. Once deforested, these lands continue to be sources of substantial burning emissions for many years due to frequent pasture burning. The objective of this research was to quantify biomass-burning emissions at a local scale. We estimated...

Limited variation in vaccine candidate Plasmodium falciparum Merozoite Surface Protein-6 over multiple transmission seasons.

PubMed

Neal, Aaron T; Jordan, Stephen J; Oliveira, Ana L; Hernandez, Jean N; Branch, Oralee H; Rayner, Julian C

2010-05-24

Plasmodium falciparum Merozoite Surface Protein-6 (PfMSP6) is a component of the complex proteinacious coat that surrounds P. falciparum merozoites. This location, and the presence of anti-PfMSP6 antibodies in P. falciparum-exposed individuals, makes PfMSP6 a potential blood stage vaccine target. However, genetic diversity has proven to be a major hurdle for vaccines targeting other blood stage P. falciparum antigens, and few endemic field studies assessing PfMSP6 gene diversity have been conducted. This study follows PfMSP6 diversity in the Peruvian Amazon from 2003 to 2006 and is the first longitudinal assessment of PfMSP6 sequence dynamics. Parasite DNA was extracted from 506 distinct P. falciparum infections spanning the transmission seasons from 2003 to 2006 as part of the Malaria Immunology and Genetics in the Amazon (MIGIA) cohort study near Iquitos, Peru. PfMSP6 was amplified from each sample using a nested PCR protocol, genotyped for allele class by agarose gel electrophoresis, and sequenced to detect diversity. Allele frequencies were analysed using JMP v.8.0.1.0 and correlated with clinical and epidemiological data collected as part of the MIGIA project. Both PfMSP6 allele classes, K1-like and 3D7-like, were detected at the study site, confirming that both are globally distributed. Allele frequencies varied significantly between transmission seasons, with 3D7-class alleles dominating and K1-class alleles nearly disappearing in 2005 and 2006. There was a significant association between allele class and village location (p-value = 0.0008), but no statistically significant association between allele class and age, sex, or symptom status. No intra-allele class sequence diversity was detected. Both PfMSP6 allele classes are globally distributed, and this study shows that allele frequencies can fluctuate significantly between communities separated by only a few kilometres, and over time in the same community. By contrast, PfMSP6 was highly stable at the sequence level, with no SNPs detected in the 506 samples analysed. This limited diversity supports further investigation of PfMSP6 as a blood stage vaccine candidate, with the clear caveat that any such vaccine must either contain both alleles or generate cross-protective responses that react against both allele classes. Detailed immunoepidemiology studies are needed to establish the viability of these approaches before PfMSP6 advances further down the vaccine development pipeline.

Coupling of oceanic carbon and nitrogen facilitates spatially resolved quantitative reconstruction of nitrate inventories.

PubMed

Glock, Nicolaas; Erdem, Zeynep; Wallmann, Klaus; Somes, Christopher J; Liebetrau, Volker; Schönfeld, Joachim; Gorb, Stanislav; Eisenhauer, Anton

2018-03-23

Anthropogenic impacts are perturbing the global nitrogen cycle via warming effects and pollutant sources such as chemical fertilizers and burning of fossil fuels. Understanding controls on past nitrogen inventories might improve predictions for future global biogeochemical cycling. Here we show the quantitative reconstruction of deglacial bottom water nitrate concentrations from intermediate depths of the Peruvian upwelling region, using foraminiferal pore density. Deglacial nitrate concentrations correlate strongly with downcore δ 13 C, consistent with modern water column observations in the intermediate Pacific, facilitating the use of δ 13 C records as a paleo-nitrate-proxy at intermediate depths and suggesting that the carbon and nitrogen cycles were closely coupled throughout the last deglaciation in the Peruvian upwelling region. Combining the pore density and intermediate Pacific δ 13 C records shows an elevated nitrate inventory of >10% during the Last Glacial Maximum relative to the Holocene, consistent with a δ 13 C-based and δ 15 N-based 3D ocean biogeochemical model and previous box modeling studies.

Carbon uptake by mature Amazon forests has mitigated Amazon nations' carbon emissions.

PubMed

Phillips, Oliver L; Brienen, Roel J W

2017-12-01

Several independent lines of evidence suggest that Amazon forests have provided a significant carbon sink service, and also that the Amazon carbon sink in intact, mature forests may now be threatened as a result of different processes. There has however been no work done to quantify non-land-use-change forest carbon fluxes on a national basis within Amazonia, or to place these national fluxes and their possible changes in the context of the major anthropogenic carbon fluxes in the region. Here we present a first attempt to interpret results from ground-based monitoring of mature forest carbon fluxes in a biogeographically, politically, and temporally differentiated way. Specifically, using results from a large long-term network of forest plots, we estimate the Amazon biomass carbon balance over the last three decades for the different regions and nine nations of Amazonia, and evaluate the magnitude and trajectory of these differentiated balances in relation to major national anthropogenic carbon emissions. The sink of carbon into mature forests has been remarkably geographically ubiquitous across Amazonia, being substantial and persistent in each of the five biogeographic regions within Amazonia. Between 1980 and 2010, it has more than mitigated the fossil fuel emissions of every single national economy, except that of Venezuela. For most nations (Bolivia, Colombia, Ecuador, French Guiana, Guyana, Peru, Suriname) the sink has probably additionally mitigated all anthropogenic carbon emissions due to Amazon deforestation and other land use change. While the sink has weakened in some regions since 2000, our analysis suggests that Amazon nations which are able to conserve large areas of natural and semi-natural landscape still contribute globally-significant carbon sequestration. Mature forests across all of Amazonia have contributed significantly to mitigating climate change for decades. Yet Amazon nations have not directly benefited from providing this global scale ecosystem service. We suggest that better monitoring and reporting of the carbon fluxes within mature forests, and understanding the drivers of changes in their balance, must become national, as well as international, priorities.

The socio-cultural importance of Mauritia flexuosa palm swamps (aguajales) and implications for multi-use management in two Maijuna communities of the Peruvian Amazon

PubMed Central

2013-01-01

Background Fruit from the palm Mauritia flexuosa (aguaje) is harvested throughout the Peruvian Amazon for subsistence and commercial purposes. Recent estimates suggest that residents of Iquitos, the largest city in the region, consume approximately 148.8 metric tons of aguaje fruit per month, the vast majority of which is harvested by felling and killing adult female trees. In this study, we sought to better understand and document the importance of M. flexuosa palm swamps (aguajales) in two Maijuna indigenous communities to inform the sustainable management of this habitat and species. Methods Semi-structured interviews, focus groups, and household surveys were carried out to assess the significance of aguajales and their associated plant and animal resources as well as to determine how the relationship that the Maijuna have with aguajales has changed over time. Results Aguajales and their associated resources are culturally significant and useful to the Maijuna in a wide variety of ways. In addition to M. flexuosa, the Maijuna use over 60 different species of plants from aguajales. When M. flexuosa is in fruit, aguajales are important hunting areas with a total of 20 different animal species hunted. The Maijuna also have traditional beliefs about aguajales, believing that malevolent supernatural beings reside in them. Notably, the relationship that the Maijuna have with aguajales has changed considerably over the years as aguaje fruit went from a subsistence item collected opportunistically from the ground to a market good destructively harvested beginning in the early 1990s. The Maijuna are concerned not only about how this has affected the future commercial harvest of aguaje but also about its effects on game animals given the importance of hunting to Maijuna cultural identity, subsistence, and income generation. Conclusions In order to meet the multiple socio-cultural and economic needs of the Maijuna, sustainable management efforts must be expanded to not only focus on the commercial harvest of aguaje but also other facets of their relationship with this habitat. Our study suggests that the research and development of multi-use forest management plans must not be restricted to commercial forest products and ecosystem services given that many communities rely on tropical forests for a wide range of non-market cultural, economic, and subsistence goods and services. PMID:23607601

The socio-cultural importance of Mauritia flexuosa palm swamps (aguajales) and implications for multi-use management in two Maijuna communities of the Peruvian Amazon.

PubMed

Gilmore, Michael P; Endress, Bryan A; Horn, Christa M

2013-04-22

Fruit from the palm Mauritia flexuosa (aguaje) is harvested throughout the Peruvian Amazon for subsistence and commercial purposes. Recent estimates suggest that residents of Iquitos, the largest city in the region, consume approximately 148.8 metric tons of aguaje fruit per month, the vast majority of which is harvested by felling and killing adult female trees. In this study, we sought to better understand and document the importance of M. flexuosa palm swamps (aguajales) in two Maijuna indigenous communities to inform the sustainable management of this habitat and species. Semi-structured interviews, focus groups, and household surveys were carried out to assess the significance of aguajales and their associated plant and animal resources as well as to determine how the relationship that the Maijuna have with aguajales has changed over time. Aguajales and their associated resources are culturally significant and useful to the Maijuna in a wide variety of ways. In addition to M. flexuosa, the Maijuna use over 60 different species of plants from aguajales. When M. flexuosa is in fruit, aguajales are important hunting areas with a total of 20 different animal species hunted. The Maijuna also have traditional beliefs about aguajales, believing that malevolent supernatural beings reside in them. Notably, the relationship that the Maijuna have with aguajales has changed considerably over the years as aguaje fruit went from a subsistence item collected opportunistically from the ground to a market good destructively harvested beginning in the early 1990s. The Maijuna are concerned not only about how this has affected the future commercial harvest of aguaje but also about its effects on game animals given the importance of hunting to Maijuna cultural identity, subsistence, and income generation. In order to meet the multiple socio-cultural and economic needs of the Maijuna, sustainable management efforts must be expanded to not only focus on the commercial harvest of aguaje but also other facets of their relationship with this habitat. Our study suggests that the research and development of multi-use forest management plans must not be restricted to commercial forest products and ecosystem services given that many communities rely on tropical forests for a wide range of non-market cultural, economic, and subsistence goods and services.

Impact of Health Education on Soil-Transmitted Helminth Infections in Schoolchildren of the Peruvian Amazon: A Cluster-Randomized Controlled Trial

PubMed Central

Gyorkos, Theresa W.; Maheu-Giroux, Mathieu; Blouin, Brittany; Casapia, Martin

2013-01-01

Background To control soil-transmitted helminth (STH) infections, the World Health Organization recommends school-based deworming programs with a health hygiene education component. The effect of such health hygiene interventions, however, has not been adequately studied. The objective of the present study was to determine the effectiveness of a health hygiene education intervention on the occurrence of STH re-infection four months post-de-worming. Methodology/Principal Findings An open-label pair-matched cluster-randomized trial was conducted in Grade 5 schoolchildren of 18 primary schools (9 intervention and 9 control) in the Peruvian Amazon. Baseline assessment included interview with a pre-tested questionnaire and collection of single stool specimens that were examined using the single Kato-Katz thick smear. All schoolchildren were then treated with single-dose albendazole (400 mg). Schoolchildren in intervention schools then received 1) an initial one hour in-class activity on health hygiene and sanitation and 30-minute refresher activities every two weeks over four months; and 2) a half-day workshop for teachers and principals, while children in control schools did not. Four months later, STH infection was re-assessed in all schools by laboratory technologists blinded to intervention status. From April 21–October 20, 2010, a total of 1,089 schoolchildren (518 and 571 from intervention and control schools, respectively) participated in this study. Intervention children scored significantly higher on all aspects of a test of STH-related knowledge compared with control children (aOR = 18·4; 95% CI: 12·7 to 26·6). The intensity of Ascaris lumbricoides infection at follow-up was statistically significantly lower (by 58%) in children in intervention schools compared with children in control schools (aIRR = 0·42; 95% CI = 0·21 to 0·85). No significant changes in hookworm or Trichuris trichiura intensity were observed. Conclusions/Significance A school-based health hygiene education intervention was effective in increasing STH knowledge and in reducing Ascaris lumbricoides infection. The benefits of school-based periodic deworming programs are likely to be enhanced when a sustained health hygiene education intervention is integrated into school curricula. PMID:24069469

Delays in seeking and receiving health care services for pneumonia in children under five in the Peruvian Amazon: a mixed-methods study on caregivers' perceptions.

PubMed

Pajuelo, Mónica J; Anticona Huaynate, Cynthia; Correa, Malena; Mayta Malpartida, Holger; Ramal Asayag, Cesar; Seminario, Juan R; Gilman, Robert H; Murphy, Laura; Oberhelman, Richard A; Paz-Soldan, Valerie A

2018-03-01

Delays in receiving adequate care for children suffering from pneumonia can be life threatening and have been described associated with parents' limited education and their difficulties in recognizing the severity of the illness. The "three delays" was a model originally proposed to describe the most common determinants of maternal mortality, but has been adapted to describe delays in the health seeking process for caregivers of children under five. This study aims to explore the caregivers' perceived barriers for seeking and receiving health care services in children under five years old admitted to a referral hospital for community-acquired pneumonia in the Peruvian Amazon Region using the three-delays model framework. There were two parts to this mixed-method, cross-sectional, hospital-based study. First, medical charts of 61 children (1 to 60 months old) admitted for pneumonia were reviewed, and clinical characteristics were noted. Second, to examine health care-seeking decisions and actions, as well as associated delays in the process of obtaining health care services, we interviewed 10 of the children's caregivers. Half of the children in our study were 9 months old or less. Main reasons for seeking care at the hospital were cough (93%) and fever (92%). Difficulty breathing and fast breathing were also reported in more than 60% of cases. In the interviews, caregivers reported delays of 1 to 14 days to go to the closest health facility. Factors perceived as causes for delays in deciding to seek care were apparent lack of skills to recognize signs and symptoms and of confidence in the health system, and practicing self-medication. No delays in reaching a health facility were reported. Once the caregivers reached a health facility, they perceived lack of competence of medical staff and inadequate treatment provided by the primary care physicians. According to caregivers, the main delays to get health care services for pneumonia among young children were identified in the initial decision of caregivers to seek healthcare and in the health system to provide it. Specific interventions targeted to main barriers may be useful for reducing delays in providing appropriate health care for children with pneumonia.

Modelling basin-wide variations in Amazon forest photosynthesis

NASA Astrophysics Data System (ADS)

Mercado, Lina; Lloyd, Jon; Domingues, Tomas; Fyllas, Nikolaos; Patino, Sandra; Dolman, Han; Sitch, Stephen

2010-05-01

Given the importance of Amazon rainforest in the global carbon and hydrological cycles, there is a need to use parameterized and validated ecosystem gas exchange and vegetation models for this region in order to adequately simulate present and future carbon and water balances. Recent research has found major differences in above-ground net primary productivity (ANPP), above ground biomass and tree dynamics across Amazonia. West Amazonia is more dynamic, with younger trees, higher stem growth rates and lower biomass than central and eastern Amazon (Baker et al. 2004; Malhi et al. 2004; Phillips et al. 2004). A factor of three variation in above-ground net primary productivity has been estimated across Amazonia by Malhi et al. (2004). Different hypotheses have been proposed to explain the observed spatial variability in ANPP (Malhi et al. 2004). First, due to the proximity to the Andes, sites from western Amazonia tend to have richer soils than central and eastern Amazon and therefore soil fertility could possibly be highly related to the high wood productivity found in western sites. Second, if GPP does not vary across the Amazon basin then different patterns of carbon allocation to respiration could also explain the observed ANPP gradient. However since plant growth depends on the interaction between photosynthesis, transport of assimilates, plant respiration, water relations and mineral nutrition, variations in plant gross photosynthesis (GPP) could also explain the observed variations in ANPP. In this study we investigate whether Amazon GPP can explain variations of observed ANPP. We use a sun and shade canopy gas exchange model that has been calibrated and evaluated at five rainforest sites (Mercado et al. 2009) to simulate gross primary productivity of 50 sites across the Amazon basin during the period 1980-2001. Such simulation differs from the ones performed with global vegetation models (Cox et al. 1998; Sitch et al. 2003) where i) single plant functional type parameter values are assigned and assumed invariant with environmental condition but also ii) these models use leaf N as a factor that limit photosynthesis. Instead, since leaf P may also limit photosynthesis of the tropical forest (Reich et al. 2009), we use a more specific description of photosynthetic capacity across the basin based on the model evaluation done in Mercado et al. (2009) in which canopy photosynthetic capacity is related to foliar P but also using the relationships derived between canopy photosynthesis and leaf nutrients (N and P) from measurements in tropical trees (Domingues et al.In review). A study of this kind can inform the global vegetation/climate community as to the need for variability in key model parameters in order to accurately simulate carbon fluxes across the Amazon basin. Baker, T. R., et al. 2004. Increasing biomass in Amazonian forest plots. Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 359 (1443):353-365. Phillips, O. L. et al. 2004. Pattern and process in Amazon tree turnover, 1976-2001. Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 359 (1443):381-407. Malhi, Y. et al. 2004. The above-ground coarse wood productivity of 104 Neotropical forest plots. Global Change Biology 10 (5):563-591. Mercado, L.M. et al. 2009. Impact of changes in diffuse radiation on the global land carbon sink. Nature 458 (7241), 1014. Cox, P. M. et al. 1998. A canopy conductance and photosynthesis model for use in a GCM land surface scheme. Journal of Hydrology 213 (1-4):79-9 Sitch, S. et al. 2003. Evaluation of ecosystem dynamics, plant geography and terrestrial carbon cycling in the LPJ dynamic global vegetation model. Global Change Biology 9 (2):161-185. Reich B. R. et al. 2009. Leaf phosphorus influences the photosynhtesis-nitrogen relation: a cross-biome analysis of 314 species. Oecologia, doi 10.1007/s00442-009-1291-3. Domingues, T. et al. In review. Co-limitation of photosynthetic capacity by nitrogen and phosphorus along a precipitation gradient in West Africa. Plant Cell and Environment.

The Amazon and climate

NASA Technical Reports Server (NTRS)

Nobre, C. A.

1984-01-01

The climatologies of cloudiness and precipitation for the Amazon, are reviewed and the physical causes of some of the observed features and those which are not well known are explained. The atmospheric circulation over the Amazon is discussed on the large scale tropical circulations forced by deep diabatic heating sources. Weather deforestation which leads to a reduction in evapotranspiration into the atmosphere, and a reduction in precipitation and its implicated for the gobal climate is discussed. It is indicated that a large scale clearing of tropical rainforests there would be a reduction in rainfall which would have global effects on climate and weather both in the tropical and extratropical regions.

From where does the Amazon forest gets its water?

NASA Astrophysics Data System (ADS)

Miguez-Macho, G.; Fan, Y.

2016-12-01

The Amazon receives abundant annual rainfall but parts of it experience a multi-month dry season. Here we ask: what is the water source that sustains the dry-season ET? Where over the Amazon it is largely local and recent rain (hence ET shutting down in dry season), or past rain that is stored in the deep soils and the groundwater (deep roots tapping deep reservoirs sustaining ET), or is it rain that fell on higher grounds (through topography-driven lateral convergence)? Using synthesis of isotope and other tracer observations and basin-wide inverse modeling (shallow soil, deep soil, with and without groundwater, with and without dynamic rooting depth), we attempt to tease out these components. The results shed light on likely ET sources and how future global change may preferentially impact Amazon ecosystem functioning.

Trace gas and aerosol transports into and out of the Amazon Basin

NASA Technical Reports Server (NTRS)

Garstang, Michael

1992-01-01

Research under Agreement NCC1-106 during the interim period Oct. 1, 1991 to May 31, 1992 has continued to use the data collected during all three ABLE missions. The work reported on in this interim period includes published papers that cover the topic of global interactions between the rain forest of the Amazon Basin and local regional processes interior to the Basin itself.

Multispecies Fisheries in the Lower Amazon River and Its Relationship with the Regional and Global Climate Variability

PubMed Central

Buss de Souza, Ronald; Freire, Juan; Isaac, Victoria Judith

2016-01-01

This paper aims to describe the spatial-temporal variability in catch of the main fishery resources of the Amazon River and floodplain lakes of the Lower Amazon, as well as relating the Catch per Unit of Effort with anomalies of some of the Amazon River, atmosphere and Atlantic Ocean system variables, determining the influence of the environment on the Amazonian fishery resources. Finfish landings data from the towns and villages of the Lower Amazon for the fisheries of three sites (Óbidos, Santarém and Monte Alegre), were obtained for the period between January 1993 and December 2004. Analysis of variance, detrended correspondence analysis, redundancy analysis and multiple regression techniques were used for the statistical analysis of the distinct time series. Fisheries production in the Lower Amazon presents differences between the Amazon River and the floodplain lakes. Production in the Amazon River is approximately half of the one of the floodplain lakes. This variability occurs both along the Lower Amazon River region (longitudinal gradient) and laterally (latitudinal gradient) for every fishing ground studied here. The distinct environmental variables alone or in association act differently on the fishery stocks and the success of catches in each fishery group studied here. Important variables are the flooding events; the soil the sea surface temperatures; the humidity; the wind and the occurence of El Niño-Southern Oscillation events. Fishery productivity presents a large difference in quantity and distribution patterns between the river and floodplain lakes. This variability occurs in the region of the Lower Amazon as well as laterally for each fishery group studied, being dependent on the ecological characteristics and life strategies of each fish group considered here. PMID:27314951

Hydrologic resilience and Amazon productivity.

PubMed

Ahlström, Anders; Canadell, Josep G; Schurgers, Guy; Wu, Minchao; Berry, Joseph A; Guan, Kaiyu; Jackson, Robert B

2017-08-30

The Amazon rainforest is disproportionately important for global carbon storage and biodiversity. The system couples the atmosphere and land, with moist forest that depends on convection to sustain gross primary productivity and growth. Earth system models that estimate future climate and vegetation show little agreement in Amazon simulations. Here we show that biases in internally generated climate, primarily precipitation, explain most of the uncertainty in Earth system model results; models, empirical data and theory converge when precipitation biases are accounted for. Gross primary productivity, above-ground biomass and tree cover align on a hydrological relationship with a breakpoint at ~2000 mm annual precipitation, where the system transitions between water and radiation limitation of evapotranspiration. The breakpoint appears to be fairly stable in the future, suggesting resilience of the Amazon to climate change. Changes in precipitation and land use are therefore more likely to govern biomass and vegetation structure in Amazonia.Earth system model simulations of future climate in the Amazon show little agreement. Here, the authors show that biases in internally generated climate explain most of this uncertainty and that the balance between water-saturated and water-limited evapotranspiration controls the Amazon resilience to climate change.

Venezuelan equine encephalitis and Oropouche virus infections among Peruvian army troops in the Amazon region of Peru.

PubMed

Watts, D M; Lavera, V; Callahan, J; Rossi, C; Oberste, M S; Roehrig, J T; Cropp, C B; Karabatsos, N; Smith, J F; Gubler, D J; Wooster, M T; Nelson, W M; Hayes, C G

1997-06-01

An outbreak of a febrile illness characterized by headache, ocular pain, myalgia, and arthralgia occurred during June 1994 among Peruvian army troops in Northern Peru. On June 14-16, 1994, clinical data and blood samples were obtained from eight soldiers with a febrile illness, and from 26 others who had a history of febrile illness during the past three months. A follow-up blood sample was obtained 107 days later from four of the febrile and seven of the afebrile soldiers. Serum samples were tested for dengue (DEN), Oropouche (ORO), and Venezuelan equine encephalitis (VEE) IgM and IgG antibodies by an enzyme-linked immunosorbent assay (ELISA). Virus isolation was performed by inoculation of newborn mice and Vero cell cultures. Viral isolates were identified by immunofluorescence, ELISA, and nucleotide sequencing. A VEE virus infection was confirmed in three of the eight febrile soldiers, two by virus isolation, and one by serology. Antigenic analysis indicated that one of the virus isolates was similar to VEE subtype I, variety ID, viruses previously isolated in Colombia and Venezuela. Nucleotide sequence data showed that both viral isolates were identical to one another and closely related to VEE ID viruses previously isolated in Peru, Colombia, and Venezuela. Serologic results showed that two of 26 afebrile soldiers had IgM antibody to VEE and four had IgG antibody to VEE; two febrile soldiers had IgG antibody in their first serum samples. Oropouche-specific IgM antibody was detected in one of the eight febrile and five of the afebrile soldiers, and 18 of the 34 soldiers had low titers of ORO IgG antibody titers, which did not meet the diagnostic criteria for confirmed cases. All soldiers were negative for DEN IgM antibody, and 10 had flavivirus IgG antibody that reacted with DEN antigens. These data indicated that VEE ID virus was one of the causes of illness among Peruvians soldiers and that this was the first association of this VEE subtype with human disease in Peru.

Methane emissions from floodplains in the Amazon Basin: challenges in developing a process-based model for global applications

NASA Astrophysics Data System (ADS)

Ringeval, B.; Houweling, S.; van Bodegom, P. M.; Spahni, R.; van Beek, R.; Joos, F.; Röckmann, T.

2014-03-01

Tropical wetlands are estimated to represent about 50% of the natural wetland methane (CH4) emissions and explain a large fraction of the observed CH4 variability on timescales ranging from glacial-interglacial cycles to the currently observed year-to-year variability. Despite their importance, however, tropical wetlands are poorly represented in global models aiming to predict global CH4 emissions. This publication documents a first step in the development of a process-based model of CH4 emissions from tropical floodplains for global applications. For this purpose, the LPX-Bern Dynamic Global Vegetation Model (LPX hereafter) was slightly modified to represent floodplain hydrology, vegetation and associated CH4 emissions. The extent of tropical floodplains was prescribed using output from the spatially explicit hydrology model PCR-GLOBWB. We introduced new plant functional types (PFTs) that explicitly represent floodplain vegetation. The PFT parameterizations were evaluated against available remote-sensing data sets (GLC2000 land cover and MODIS Net Primary Productivity). Simulated CH4 flux densities were evaluated against field observations and regional flux inventories. Simulated CH4 emissions at Amazon Basin scale were compared to model simulations performed in the WETCHIMP intercomparison project. We found that LPX reproduces the average magnitude of observed net CH4 flux densities for the Amazon Basin. However, the model does not reproduce the variability between sites or between years within a site. Unfortunately, site information is too limited to attest or disprove some model features. At the Amazon Basin scale, our results underline the large uncertainty in the magnitude of wetland CH4 emissions. Sensitivity analyses gave insights into the main drivers of floodplain CH4 emission and their associated uncertainties. In particular, uncertainties in floodplain extent (i.e., difference between GLC2000 and PCR-GLOBWB output) modulate the simulated emissions by a factor of about 2. Our best estimates, using PCR-GLOBWB in combination with GLC2000, lead to simulated Amazon-integrated emissions of 44.4 ± 4.8 Tg yr-1. Additionally, the LPX emissions are highly sensitive to vegetation distribution. Two simulations with the same mean PFT cover, but different spatial distributions of grasslands within the basin, modulated emissions by about 20%. Correcting the LPX-simulated NPP using MODIS reduces the Amazon emissions by 11.3%. Finally, due to an intrinsic limitation of LPX to account for seasonality in floodplain extent, the model failed to reproduce the full dynamics in CH4 emissions but we proposed solutions to this issue. The interannual variability (IAV) of the emissions increases by 90% if the IAV in floodplain extent is accounted for, but still remains lower than in most of the WETCHIMP models. While our model includes more mechanisms specific to tropical floodplains, we were unable to reduce the uncertainty in the magnitude of wetland CH4 emissions of the Amazon Basin. Our results helped identify and prioritize directions towards more accurate estimates of tropical CH4 emissions, and they stress the need for more research to constrain floodplain CH4 emissions and their temporal variability, even before including other fundamental mechanisms such as floating macrophytes or lateral water fluxes.

Web services for ecosystem services management and poverty alleviation

NASA Astrophysics Data System (ADS)

Buytaert, W.; Baez, S.; Veliz Rosas, C.

2011-12-01

Over the last decades, near real-time environmental observation, technical advances in computer power and cyber-infrastructure, and the development of environmental software algorithms have increased dramatically. The integration of these evolutions is one of the major challenges of the next decade for environmental sciences. Worldwide, many coordinated activities are ongoing to make this integration a reality. However, far less attention is paid to the question of how these developments can benefit environmental services management in a poverty alleviation context. Such projects are typically faced with issues of large predictive uncertainties, limited resources, limited local scientific capacity. At the same time, the complexity of the socio-economic contexts requires a very strong bottom-up oriented and interdisciplinary approach to environmental data collection and processing. Here, we present the results of two projects on integrated environmental monitoring and scenario analysis aimed at poverty alleviation in the Peruvian Andes and Amazon. In the upper Andean highlands, farmers are monitoring the water cycle of headwater catchments to analyse the impact of land-use changes on stream flow and potential consequences for downstream irrigation. In the Amazon, local communities are monitoring the dynamics of turtle populations and their relations with river levels. In both cases, the use of online databases and web processing services enable real-time analysis of the data and scenario analysis. The system provides both physical and social indicators to assess the impact of land-use management options on local socio-economic development.

DNA Metabarcoding of Amazonian Ichthyoplankton Swarms

PubMed Central

Maggia, M. E.; Vigouroux, Y.; Renno, J. F.; Duponchelle, F.; Desmarais, E.; Nunez, J.; García-Dávila, C.; Carvajal-Vallejos, F. M.; Paradis, E.; Martin, J. F.; Mariac, C.

2017-01-01

Tropical rainforests harbor extraordinary biodiversity. The Amazon basin is thought to hold 30% of all river fish species in the world. Information about the ecology, reproduction, and recruitment of most species is still lacking, thus hampering fisheries management and successful conservation strategies. One of the key understudied issues in the study of population dynamics is recruitment. Fish larval ecology in tropical biomes is still in its infancy owing to identification difficulties. Molecular techniques are very promising tools for the identification of larvae at the species level. However, one of their limits is obtaining individual sequences with large samples of larvae. To facilitate this task, we developed a new method based on the massive parallel sequencing capability of next generation sequencing (NGS) coupled with hybridization capture. We focused on the mitochondrial marker cytochrome oxidase I (COI). The results obtained using the new method were compared with individual larval sequencing. We validated the ability of the method to identify Amazonian catfish larvae at the species level and to estimate the relative abundance of species in batches of larvae. Finally, we applied the method and provided evidence for strong temporal variation in reproductive activity of catfish species in the Ucayalí River in the Peruvian Amazon. This new time and cost effective method enables the acquisition of large datasets, paving the way for a finer understanding of reproductive dynamics and recruitment patterns of tropical fish species, with major implications for fisheries management and conservation. PMID:28095487

Design of experiments for the development of poly( d, l-lactide- co-glycolide) nanoparticles loaded with Uncaria tomentosa

NASA Astrophysics Data System (ADS)

Ribeiro, Ana Ferreira; Ferreira, Carina Torres Garruth; dos Santos, Juliana Fernandes; Cabral, Lúcio Mendes; de Sousa, Valéria Pereira

2015-02-01

Polymeric nanoparticles have been shown to be effective carriers for natural substances that possess anticancer properties. Incorporation of these natural substances into polymeric nanoparticles increases targeting of these drugs, thus reducing side effects. Uncaria tomentosa (UT) is a Peruvian Amazon plant (existing in the Brazilian Amazon rainforest) that possesses promising anti-tumor activity. This paper describes the development of poly( d, l-lactide- co-glycolide) (PLGA) nanoparticles loaded with UT extract. The emulsion solvent evaporation method was utilized and the initial conditions were determined for the organic phase (OP) and the aqueous phase (AP). The influence of surfactant (type and concentration), PLGA concentration and AP volume on nanoparticle size, polydispersity index (PI), and entrapment efficiency (EE) was determined using a fractional factorial design (FFD). In addition, the formulation was optimized using a Box-Behnken design. After the conditions were optimized, UT nanoparticles were obtained using an OP composed of an ethyl acetate:acetone (3:2) mixture which contained the UT alkaloids and PLGA, and an AP composed of a buffered solution of Poloxamer 188 (pH 7.5). The optimized formulation produced an EE of 64.6 %, a particle size of 107.4 nm and a PI of 0.163. The preliminary experiments provided important information regarding the behavior of the nanoparticulate system and the FFD used in this study greatly facilitated the selection of the most optimal conditions for formulation development.

Between Andes and Amazon: the genetic profile of the Arawak-speaking Yanesha.

PubMed

Barbieri, Chiara; Heggarty, Paul; Yang Yao, Daniele; Ferri, Gianmarco; De Fanti, Sara; Sarno, Stefania; Ciani, Graziella; Boattini, Alessio; Luiselli, Donata; Pettener, Davide

2014-12-01

The Yanesha are a Peruvian population who inhabit an environment transitional between the Andes and Amazonia. They present cultural traits characteristic of both regions, including in the language they speak: Yanesha belongs to the Arawak language family (which very likely originated in the Amazon/Orinoco lowlands), but has been strongly influenced by Quechua, the most widespread language family of the Andes. Given their location and cultural make-up, the Yanesha make for an ideal case study for investigating language and population dynamics across the Andes-Amazonia divide. In this study, we analyze data from high and mid-altitude Yanesha villages, both Y chromosome (17 STRs and 16 SNPs diagnostic for assigning haplogroups) and mtDNA data (control region sequences and 3 SNPs and one INDEL diagnostic for assigning haplogroups). We uncover sex-biased genetic trends that probably arose in different stages: first, a male-biased gene flow from Andean regions, genetically consistent with highland Quechua-speakers and probably dating back to Inca expansion; and second, traces of European contact consistent with Y chromosome lineages from Italy and Tyrol, in line with historically documented migrations. Most research in the history, archaeology and linguistics of South America has long been characterized by perceptions of a sharp divide between the Andes and Amazonia; our results serve as a clear case-study confirming demographic flows across that 'divide'. © 2014 The Authors. American journal of physical Anthropology published by Wiley Periodocals, Inc.

The changing hydrology of a dammed Amazon

PubMed Central

Timpe, Kelsie; Kaplan, David

2017-01-01

Developing countries around the world are expanding hydropower to meet growing energy demand. In the Brazilian Amazon, >200 dams are planned over the next 30 years, and questions about the impacts of current and future hydropower in this globally important watershed remain unanswered. In this context, we applied a hydrologic indicator method to quantify how existing Amazon dams have altered the natural flow regime and to identify predictors of alteration. The type and magnitude of hydrologic alteration varied widely by dam, but the largest changes were to critical characteristics of the flood pulse. Impacts were largest for low-elevation, large-reservoir dams; however, small dams had enormous impacts relative to electricity production. Finally, the “cumulative” effect of multiple dams was significant but only for some aspects of the flow regime. This analysis is a first step toward the development of environmental flows plans and policies relevant to the Amazon and other megadiverse river basins. PMID:29109972

Trace gas fluxes from intensively managed rice and soybean fields across three growing seasons in the Brazilian Amazon

Treesearch

R.C. Oliveira Junior; Michael Keller; P. Crill; T. Beldini; J. Van Haren; P. Camargo

2015-01-01

The emission of gases that may potentially intensify the greenhouse effect has received special attention due to their ability to raise global temperatures and possibly modify conditions for life on earth. The objectives of this study were the quantification of trace gas flux (N2O, CO2 and CH4) in soils of the lower Amazon basin that are planted with rice and soybean,...

Mapping Deforestation and Land Use in Amazon Rainforest Using SAR-C Imagery

NASA Technical Reports Server (NTRS)

Saatchi, Sasan S.; Soares, Joao Vianei; Alves, Diogenes Salas

1996-01-01

Land use changes and deforestation in tropical rainforests are among the major factors affecting the overall function of the global environment. To routinely assess the spatial extend and temporal dynamics of these changes has become an important challenge in several scientific disciplines such as climate and environmental studies. In this paper, the feasibility of using polarimetric spaceborne SAR data in mapping land cover types in the Amazon is studied.

Epidemiology of Plasmodium vivax Malaria in Peru

PubMed Central

Rosas-Aguirre, Angel; Gamboa, Dionicia; Manrique, Paulo; Conn, Jan E.; Moreno, Marta; Lescano, Andres G.; Sanchez, Juan F.; Rodriguez, Hugo; Silva, Hermann; Llanos-Cuentas, Alejandro; Vinetz, Joseph M.

2016-01-01

Malaria in Peru, dominated by Plasmodium vivax, remains a public health problem. The 1990s saw newly epidemic malaria emerge, primarily in the Loreto Department in the Amazon region, including areas near to Iquitos, the capital city, but sporadic malaria transmission also occurred in the 1990s–2000s in both north-coastal Peru and the gold mining regions of southeastern Peru. Although a Global Fund-supported intervention (PAMAFRO, 2005–2010) was temporally associated with a decrease of malaria transmission, from 2012 to the present, both P. vivax and Plasmodium falciparum malaria cases have rapidly increased. The Peruvian Ministry of Health continues to provide artemesinin-based combination therapy for microscopy-confirmed cases of P. falciparum and chloroquine–primaquine for P. vivax. Malaria transmission continues in remote areas nonetheless, where the mobility of humans and parasites facilitates continued reintroduction outside of ongoing surveillance activities, which is critical to address for future malaria control and elimination efforts. Ongoing P. vivax research gaps in Peru include the following: identification of asymptomatic parasitemics, quantification of the contribution of patent and subpatent parasitemics to mosquito transmission, diagnosis of nonparasitemic hypnozoite carriers, and implementation of surveillance for potential emergence of chloroquine- and 8-aminoquinoline-resistant P. vivax. Clinical trials of tafenoquine in Peru have been promising, and glucose-6-phosphate dehydrogenase deficiency in the region has not been observed to be a limitation to its use. Larger-scale challenges for P. vivax (and malaria in general) in Peru include logistical difficulties in accessing remote riverine populations, consequences of government policy and poverty trends, and obtaining international funding for malaria control and elimination. PMID:27799639

Geochemistry of the Amazon Estuary

USGS Publications Warehouse

Smoak, Joseph M.; Krest, James M.; Swarzenski, Peter W

2006-01-01

The Amazon River supplies more freshwater to the ocean than any other river in the world. This enormous volume of freshwater forces the estuarine mixing out of the river channel and onto the continental shelf. On the continental shelf, the estuarine mixing occurs in a very dynamic environment unlike that of a typical estuary. The tides, the wind, and the boundary current that sweeps the continental shelf have a pronounced influence on the chemical and biological processes occurring within the estuary. The dynamic environment, along with the enormous supply of water, solutes and particles makes the Amazon estuary unique. This chapter describes the unique features of the Amazon estuary and how these features influence the processes occurring within the estuary. Examined are the supply and cycling of major and minor elements, and the use of naturally occurring radionuclides to trace processes including water movement, scavenging, sediment-water interaction, and sediment accumulation rates. The biogeochemical cycling of carbon, nitrogen, and phosphorus, and the significances of the Amazon estuary in the global mass balance of these elements are examined.

Amazon Forests Maintain Consistent Canopy Structure and Greenness During the Dry Season

NASA Technical Reports Server (NTRS)

Morton, Douglas C.; Nagol, Jyoteshwar; Carabajal, Claudia C.; Rosette, Jacqueline; Palace, Michael; Cook, Bruce D.; Vermote, Eric F.; Harding, David J.; North, Peter R. J.

2014-01-01

The seasonality of sunlight and rainfall regulates net primary production in tropical forests. Previous studies have suggested that light is more limiting than water for tropical forest productivity, consistent with greening of Amazon forests during the dry season in satellite data.We evaluated four potential mechanisms for the seasonal green-up phenomenon, including increases in leaf area or leaf reflectance, using a sophisticated radiative transfer model and independent satellite observations from lidar and optical sensors. Here we show that the apparent green up of Amazon forests in optical remote sensing data resulted from seasonal changes in near-infrared reflectance, an artefact of variations in sun-sensor geometry. Correcting this bidirectional reflectance effect eliminated seasonal changes in surface reflectance, consistent with independent lidar observations and model simulations with unchanging canopy properties. The stability of Amazon forest structure and reflectance over seasonal timescales challenges the paradigm of light-limited net primary production in Amazon forests and enhanced forest growth during drought conditions. Correcting optical remote sensing data for artefacts of sun-sensor geometry is essential to isolate the response of global vegetation to seasonal and interannual climate variability.

Amazon forests maintain consistent canopy structure and greenness during the dry season.

PubMed

Morton, Douglas C; Nagol, Jyoteshwar; Carabajal, Claudia C; Rosette, Jacqueline; Palace, Michael; Cook, Bruce D; Vermote, Eric F; Harding, David J; North, Peter R J

2014-02-13

The seasonality of sunlight and rainfall regulates net primary production in tropical forests. Previous studies have suggested that light is more limiting than water for tropical forest productivity, consistent with greening of Amazon forests during the dry season in satellite data. We evaluated four potential mechanisms for the seasonal green-up phenomenon, including increases in leaf area or leaf reflectance, using a sophisticated radiative transfer model and independent satellite observations from lidar and optical sensors. Here we show that the apparent green up of Amazon forests in optical remote sensing data resulted from seasonal changes in near-infrared reflectance, an artefact of variations in sun-sensor geometry. Correcting this bidirectional reflectance effect eliminated seasonal changes in surface reflectance, consistent with independent lidar observations and model simulations with unchanging canopy properties. The stability of Amazon forest structure and reflectance over seasonal timescales challenges the paradigm of light-limited net primary production in Amazon forests and enhanced forest growth during drought conditions. Correcting optical remote sensing data for artefacts of sun-sensor geometry is essential to isolate the response of global vegetation to seasonal and interannual climate variability.

Large emissions from floodplain trees close the Amazon methane budget.

PubMed

Pangala, Sunitha R; Enrich-Prast, Alex; Basso, Luana S; Peixoto, Roberta Bittencourt; Bastviken, David; Hornibrook, Edward R C; Gatti, Luciana V; Marotta, Humberto; Calazans, Luana Silva Braucks; Sakuragui, Cassia Mônica; Bastos, Wanderley Rodrigues; Malm, Olaf; Gloor, Emanuel; Miller, John Bharat; Gauci, Vincent

2017-12-14

Wetlands are the largest global source of atmospheric methane (CH 4 ), a potent greenhouse gas. However, methane emission inventories from the Amazon floodplain, the largest natural geographic source of CH 4 in the tropics, consistently underestimate the atmospheric burden of CH 4 determined via remote sensing and inversion modelling, pointing to a major gap in our understanding of the contribution of these ecosystems to CH 4 emissions. Here we report CH 4 fluxes from the stems of 2,357 individual Amazonian floodplain trees from 13 locations across the central Amazon basin. We find that escape of soil gas through wetland trees is the dominant source of regional CH 4 emissions. Methane fluxes from Amazon tree stems were up to 200 times larger than emissions reported for temperate wet forests and tropical peat swamp forests, representing the largest non-ebullitive wetland fluxes observed. Emissions from trees had an average stable carbon isotope value (δ 13 C) of -66.2 ± 6.4 per mil, consistent with a soil biogenic origin. We estimate that floodplain trees emit 15.1 ± 1.8 to 21.2 ± 2.5 teragrams of CH 4 a year, in addition to the 20.5 ± 5.3 teragrams a year emitted regionally from other sources. Furthermore, we provide a 'top-down' regional estimate of CH 4 emissions of 42.7 ± 5.6 teragrams of CH 4 a year for the Amazon basin, based on regular vertical lower-troposphere CH 4 profiles covering the period 2010-2013. We find close agreement between our 'top-down' and combined 'bottom-up' estimates, indicating that large CH 4 emissions from trees adapted to permanent or seasonal inundation can account for the emission source that is required to close the Amazon CH 4 budget. Our findings demonstrate the importance of tree stem surfaces in mediating approximately half of all wetland CH 4 emissions in the Amazon floodplain, a region that represents up to one-third of the global wetland CH 4 source when trees are combined with other emission sources.

Large emissions from floodplain trees close the Amazon methane budget

NASA Astrophysics Data System (ADS)

Pangala, Sunitha R.; Enrich-Prast, Alex; Basso, Luana S.; Peixoto, Roberta Bittencourt; Bastviken, David; Hornibrook, Edward R. C.; Gatti, Luciana V.; Marotta, Humberto; Calazans, Luana Silva Braucks; Sakuragui, Cassia Mônica; Bastos, Wanderley Rodrigues; Malm, Olaf; Gloor, Emanuel; Miller, John Bharat; Gauci, Vincent

2017-12-01

Wetlands are the largest global source of atmospheric methane (CH4), a potent greenhouse gas. However, methane emission inventories from the Amazon floodplain, the largest natural geographic source of CH4 in the tropics, consistently underestimate the atmospheric burden of CH4 determined via remote sensing and inversion modelling, pointing to a major gap in our understanding of the contribution of these ecosystems to CH4 emissions. Here we report CH4 fluxes from the stems of 2,357 individual Amazonian floodplain trees from 13 locations across the central Amazon basin. We find that escape of soil gas through wetland trees is the dominant source of regional CH4 emissions. Methane fluxes from Amazon tree stems were up to 200 times larger than emissions reported for temperate wet forests and tropical peat swamp forests, representing the largest non-ebullitive wetland fluxes observed. Emissions from trees had an average stable carbon isotope value (δ13C) of -66.2 ± 6.4 per mil, consistent with a soil biogenic origin. We estimate that floodplain trees emit 15.1 ± 1.8 to 21.2 ± 2.5 teragrams of CH4 a year, in addition to the 20.5 ± 5.3 teragrams a year emitted regionally from other sources. Furthermore, we provide a ‘top-down’ regional estimate of CH4 emissions of 42.7 ± 5.6 teragrams of CH4 a year for the Amazon basin, based on regular vertical lower-troposphere CH4 profiles covering the period 2010-2013. We find close agreement between our ‘top-down’ and combined ‘bottom-up’ estimates, indicating that large CH4 emissions from trees adapted to permanent or seasonal inundation can account for the emission source that is required to close the Amazon CH4 budget. Our findings demonstrate the importance of tree stem surfaces in mediating approximately half of all wetland CH4 emissions in the Amazon floodplain, a region that represents up to one-third of the global wetland CH4 source when trees are combined with other emission sources.

A cosmogenic 10Be chronology for the local last glacial maximum and termination in the Cordillera Oriental, southern Peruvian Andes: Implications for the tropical role in global climate

NASA Astrophysics Data System (ADS)

Bromley, Gordon R. M.; Schaefer, Joerg M.; Hall, Brenda L.; Rademaker, Kurt M.; Putnam, Aaron E.; Todd, Claire E.; Hegland, Matthew; Winckler, Gisela; Jackson, Margaret S.; Strand, Peter D.

2016-09-01

Resolving patterns of tropical climate variability during and since the last glacial maximum (LGM) is fundamental to assessing the role of the tropics in global change, both on ice-age and sub-millennial timescales. Here, we present a10Be moraine chronology from the Cordillera Carabaya (14.3°S), a sub-range of the Cordillera Oriental in southern Peru, covering the LGM and the first half of the last glacial termination. Additionally, we recalculate existing 10Be ages using a new tropical high-altitude production rate in order to put our record into broader spatial context. Our results indicate that glaciers deposited a series of moraines during marine isotope stage 2, broadly synchronous with global glacier maxima, but that maximum glacier extent may have occurred prior to stage 2. Thereafter, atmospheric warming drove widespread deglaciation of the Cordillera Carabaya. A subsequent glacier resurgence culminated at ∼16,100 yrs, followed by a second period of glacier recession. Together, the observed deglaciation corresponds to Heinrich Stadial 1 (HS1: ∼18,000-14,600 yrs), during which pluvial lakes on the adjacent Peruvian-Bolivian altiplano rose to their highest levels of the late Pleistocene as a consequence of southward displacement of the inter-tropical convergence zone and intensification of the South American summer monsoon. Deglaciation in the Cordillera Carabaya also coincided with the retreat of higher-latitude mountain glaciers in the Southern Hemisphere. Our findings suggest that HS1 was characterised by atmospheric warming and indicate that deglaciation of the southern Peruvian Andes was driven by rising temperatures, despite increased precipitation. Recalculated 10Be data from other tropical Andean sites support this model. Finally, we suggest that the broadly uniform response during the LGM and termination of the glaciers examined here involved equatorial Pacific sea-surface temperature anomalies and propose a framework for testing the viability of this conceptual model.

The Late Miocene paleogeography of the Amazon Basin and the evolution of the Amazon River system

NASA Astrophysics Data System (ADS)

Latrubesse, Edgardo M.; Cozzuol, Mario; da Silva-Caminha, Silane A. F.; Rigsby, Catherine A.; Absy, Maria Lucia; Jaramillo, Carlos

2010-05-01

On the basis of paleontological content (vertebrates and palynology) and facies analysis from river banks, road cuts, and three wells, we have assigned the uppermost levels of the Solimões Formation in western Amazonia, Brazil, to the Late Miocene. The vertebrate fossil record from outcropping sediments is assigned to the Huayquerian-Mesopotamian mammalian biozones, spanning 9-6.5 Ma. Additionally, we present results that demonstrate that deposits in Peruvian Amazonia attributed to Miocene tidal environments are actually fluvial sediments that have been misinterpreted (both environmentally and chronologically) by several authors. The entire Late Miocene sequence was deposited in a continental environment within a subsiding basin. The facies analysis, fossil fauna content, and palynological record indicate that the environment of deposition was dominated by avulsive rivers associated with megafan systems, and avulsive rivers in flood basins (swamps, lakes, internal deltas, and splays). Soils developed on the flatter, drier areas, which were dominated by grasslands and gallery forest in a tropical to subtropical climate. These Late Miocene sediments were deposited from westward of the Purus arch up to the border of Brazil with Peru (Divisor Ranges) and Bolivia (Pando block). Eastward of the Iquitos structural high, however, more detailed studies, including vertebrate paleontology, need to be performed to calibrate with more precision the ages of the uppermost levels of the Solimões Formation. The evolution of the basin during the late Miocene is mainly related to the tectonic behavior of the Central Andes (˜ 3°-15°S). At approximately 5 Ma, a segment of low angle of subduction was well developed in the Nazca Plate, and the deformation in the Subandean foreland produced the inland reactivation of the Divisor/Contamana Ranges and tectonic arrangements in the Eastern Andes. During the Pliocene southwestern Brazilian Amazonia ceased to be an effective sedimentary basin, and became instead an erosional area that contributed sediments to the Amazon fluvial system. At that time, the lowland fluvial systems of southwestern Amazonia (the Purus, Jurua and Javarí basins) become isolated from the Andes by the newly formed north-flowing Ucayali system and south-east flowing Madre de Dios System. It was during the early Pliocene that the Amazon fluvial system integrated regionally and acquired its present appearance, and also when it started to drain water and sediments on a large scale to the Atlantic Ocean.

Regional atmospheric CO2 inversion reveals seasonal and geographic differences in Amazon net biome exchange.

PubMed

Alden, Caroline B; Miller, John B; Gatti, Luciana V; Gloor, Manuel M; Guan, Kaiyu; Michalak, Anna M; van der Laan-Luijkx, Ingrid T; Touma, Danielle; Andrews, Arlyn; Basso, Luana S; Correia, Caio S C; Domingues, Lucas G; Joiner, Joanna; Krol, Maarten C; Lyapustin, Alexei I; Peters, Wouter; Shiga, Yoichi P; Thoning, Kirk; van der Velde, Ivar R; van Leeuwen, Thijs T; Yadav, Vineet; Diffenbaugh, Noah S

2016-10-01

Understanding tropical rainforest carbon exchange and its response to heat and drought is critical for quantifying the effects of climate change on tropical ecosystems, including global climate-carbon feedbacks. Of particular importance for the global carbon budget is net biome exchange of CO2 with the atmosphere (NBE), which represents nonfire carbon fluxes into and out of biomass and soils. Subannual and sub-Basin Amazon NBE estimates have relied heavily on process-based biosphere models, despite lack of model agreement with plot-scale observations. We present a new analysis of airborne measurements that reveals monthly, regional-scale (~1-8 × 10(6)  km(2) ) NBE variations. We develop a regional atmospheric CO2 inversion that provides the first analysis of geographic and temporal variability in Amazon biosphere-atmosphere carbon exchange and that is minimally influenced by biosphere model-based first guesses of seasonal and annual mean fluxes. We find little evidence for a clear seasonal cycle in Amazon NBE but do find NBE sensitivity to aberrations from long-term mean climate. In particular, we observe increased NBE (more carbon emitted to the atmosphere) associated with heat and drought in 2010, and correlations between wet season NBE and precipitation (negative correlation) and temperature (positive correlation). In the eastern Amazon, pulses of increased NBE persisted through 2011, suggesting legacy effects of 2010 heat and drought. We also identify regional differences in postdrought NBE that appear related to long-term water availability. We examine satellite proxies and find evidence for higher gross primary productivity (GPP) during a pulse of increased carbon uptake in 2011, and lower GPP during a period of increased NBE in the 2010 dry season drought, but links between GPP and NBE changes are not conclusive. These results provide novel evidence of NBE sensitivity to short-term temperature and moisture extremes in the Amazon, where monthly and sub-Basin estimates have not been previously available. © 2016 John Wiley & Sons Ltd.

Comparing Amazon Basin CO2 fluxes from an atmospheric inversion with TRENDY biosphere models

NASA Astrophysics Data System (ADS)

Diffenbaugh, N. S.; Alden, C. B.; Harper, A. B.; Ahlström, A.; Touma, D. E.; Miller, J. B.; Gatti, L. V.; Gloor, M.

2015-12-01

Net exchange of carbon dioxide (CO2) between the atmosphere and the terrestrial biosphere is sensitive to environmental conditions, including extreme heat and drought. Of particular importance for local and global carbon balance and climate are the expansive tracts of tropical rainforest located in the Amazon Basin. Because of the Basin's size and ecological heterogeneity, net biosphere CO2 exchange with the atmosphere remains largely un-constrained. In particular, the response of net CO2 exchange to changes in environmental conditions such as temperature and precipitation are not yet well known. However, proper representation of these relationships in biosphere models is a necessary constraint for accurately modeling future climate and climate-carbon cycle feedbacks. In an effort to compare biosphere response to climate across different biosphere models, the TRENDY model intercomparison project coordinated the simulation of CO2 fluxes between the biosphere and atmosphere, in response to historical climate forcing, by 9 different Dynamic Global Vegetation Models. We examine the TRENDY model results in the Amazon Basin, and compare this "bottom-up" method with fluxes derived from a "top-down" approach to estimating net CO2 fluxes, obtained through atmospheric inverse modeling using CO2 measurements sampled by aircraft above the basin. We compare the "bottom-up" and "top-down" fluxes in 5 sub-regions of the Amazon basin on a monthly basis for 2010-2012. Our results show important periods of agreement between some models in the TRENDY suite and atmospheric inverse model results, notably the simulation of increased biosphere CO2 loss during wet season heat in the Central Amazon. During the dry season, however, model ability to simulate observed response of net CO2 exchange to drought was varied, with few models able to reproduce the "top-down" inversion flux signals. Our results highlight the value of atmospheric trace gas observations for helping to narrow the possibilities of future carbon-climate interactions, especially in historically under-observed regions like the Amazon.

Regional Atmospheric CO2 Inversion Reveals Seasonal and Geographic Differences in Amazon Net Biome Exchange

NASA Technical Reports Server (NTRS)

Alden, Caroline B.; Miller, John B.; Gatti, Luciana V.; Gloor, Manuel M.; Guan, Kaiyu; Michalak, Anna M.; van der Laan-Luijkx, Ingrid; Touma, Danielle; Andrews, Arlyn; Basso, Luana G.;

Stability in a changing world - palm community dynamics in the hyperdiverse western Amazon over 17 years.

PubMed

Olivares, Ingrid; Svenning, Jens-Christian; van Bodegom, Peter M; Valencia, Renato; Balslev, Henrik

2017-03-01

Are the hyperdiverse local forests of the western Amazon undergoing changes linked to global and local drivers such as climate change, or successional dynamics? We analyzed local climatic records to assess potential climatic changes in Yasuní National Park, Ecuador, and compared two censuses (1995, 2012) of a palm community to assess changes in community structure and composition. Over 17 years, the structure and composition of this palm community remained remarkably stable. Soil humidity was significantly lower and canopy conditions were significantly more open in 2012 compared to 1995, but local climatic records showed that no significant changes in precipitation, temperature or river level have occurred during the last decade. Thus, we found no evidence of recent directional shifts in climate or the palm community in Yasuní. The absence of changes in local climate and plant community dynamics in Yasuní contrasts with recent findings from eastern Amazon, where environmental change is driving significant changes in ecosystem dynamics. Our findings suggest that until now, local forests in the northwest Amazon may have escaped pressure from climate change. The stability of this rich palm community embedded in the hyperdiverse Yasuní National Park underlines its uniqueness as a sanctuary for the protection of Amazonian diversity from global change impacts. © 2016 John Wiley & Sons Ltd.

Co-variability of smoke and fire in the Amazon basin

NASA Astrophysics Data System (ADS)

Mishra, Amit Kumar; Lehahn, Yoav; Rudich, Yinon; Koren, Ilan

2015-05-01

The Amazon basin is a hot spot of anthropogenically-driven biomass burning, accounting for approximately 15% of total global fire emissions. It is essential to accurately measure these fires for robust regional and global modeling of key environmental processes. Here we have explored the link between spatio-temporal variability patterns in the Amazon basin's fires and the resulting smoke loading using 11 years (2002-2012) of data from the Moderate Resolution Imaging Spectroradiometer (MODIS) and the Aerosol Robotic Network (AERONET) observations. Focusing on the peak burning season (July-October), our analysis shows strong inter-annual correlation between aerosol optical depth (AOD) and two MODIS fire products: fire radiative power (FRP) and fire pixel counts (FC). Among these two fire products, the FC better indicates the amount of smoke in the basin, as represented in remotely sensed AOD data. This fire product is significantly correlated both with regional AOD retrievals from MODIS and with point AOD measurements from the AERONET stations, pointing to spatial homogenization of the smoke over the basin on a seasonal time scale. However, MODIS AODs are found better than AERONET AODs observation for linking between smoke and fire. Furthermore, MODIS AOD measurements are strongly correlated with number of fires ∼10-20 to the east, most likely due to westward advection of smoke by the wind. These results can be rationalized by the regional topography and the wind regimes. Our analysis can improve data assimilation of satellite and ground-based observations into regional and global model studies, thus improving the assessment of the environmental and climatic impacts of frequency and distribution variability of the Amazon basin's fires. We also provide the optimal spatial and temporal scales for ground-based observations, which could be used for such applications.

Role of vegetation change in future climate under the A1B scenario and a climate stabilisation scenario, using the HadCM3C earth system model

NASA Astrophysics Data System (ADS)

Falloon, P. D.; Dankers, R.; Betts, R. A.; Jones, C. D.; Booth, B. B. B.; Lambert, F. H.

2012-06-01

The aim of our study was to use the coupled climate-carbon cycle model HadCM3C to quantify climate impact of ecosystem changes over recent decades and under future scenarios, due to changes in both atmospheric CO2 and surface albedo. We use two future scenarios - the IPCC SRES A1B scenario, and a climate stabilisation scenario (2C20), allowing us to assess the impact of climate mitigation on results. We performed a pair of simulations under each scenario - one in which vegetation was fixed at the initial state and one in which vegetation changes dynamically in response to climate change, as determined by the interactive vegetation model within HadCM3C. In our simulations with interactive vegetation, relatively small changes in global vegetation coverage were found, mainly dominated by increases in scrub and needleleaf trees at high latitudes and losses of broadleaf trees and grasses across the Amazon. Globally this led to a loss of terrestrial carbon, mainly from the soil. Global changes in carbon storage were related to the regional losses from the Amazon and gains at high latitude. Regional differences in carbon storage between the two scenarios were largely driven by the balance between warming-enhanced decomposition and altered vegetation growth. Globally, interactive vegetation reduced albedo acting to enhance albedo changes due to climate change. This was mainly related to the darker land surface over high latitudes (due to vegetation expansion, particularly during winter and spring); small increases in albedo occurred over the Amazon. As a result, there was a relatively small impact of vegetation change on most global annual mean climate variables, which was generally greater under A1B than 2C20, with markedly stronger local-to-regional and seasonal impacts. Globally, vegetation change amplified future annual temperature increases by 0.24 and 0.15 K (under A1B and 2C20, respectively) and increased global precipitation, with reductions in precipitation over the Amazon and increases over high latitudes. In general, changes were stronger over land - for example, global temperature changes due to interactive vegetation of 0.43 and 0.28 K under A1B and 2C20, respectively. Regionally, the warming influence of future vegetation change in our simulations was driven by the balance between driving factors. For instance, reduced tree cover over the Amazon reduced evaporation (particularly during summer), outweighing the cooling influence of any small albedo changes. In contrast, at high latitudes the warming impact of reduced albedo (particularly during winter and spring) due to increased vegetation cover appears to have offset any cooling due to small evaporation increases. Climate mitigation generally reduced the impact of vegetation change on future global and regional climate in our simulations. Our study therefore suggests that there is a need to consider both biogeochemical and biophysical effects in climate adaptation and mitigation decision making.

Role of vegetation change in future climate under the A1B scenario and a climate stabilisation scenario, using the HadCM3C Earth system model

NASA Astrophysics Data System (ADS)

Falloon, P. D.; Dankers, R.; Betts, R. A.; Jones, C. D.; Booth, B. B. B.; Lambert, F. H.

2012-11-01

The aim of our study was to use the coupled climate-carbon cycle model HadCM3C to quantify climate impact of ecosystem changes over recent decades and under future scenarios, due to changes in both atmospheric CO2 and surface albedo. We use two future scenarios - the IPCC SRES A1B scenario, and a climate stabilisation scenario (2C20), allowing us to assess the impact of climate mitigation on results. We performed a pair of simulations under each scenario - one in which vegetation was fixed at the initial state and one in which vegetation changes dynamically in response to climate change, as determined by the interactive vegetation model within HadCM3C. In our simulations with interactive vegetation, relatively small changes in global vegetation coverage were found, mainly dominated by increases in shrub and needleleaf trees at high latitudes and losses of broadleaf trees and grasses across the Amazon. Globally this led to a loss of terrestrial carbon, mainly from the soil. Global changes in carbon storage were related to the regional losses from the Amazon and gains at high latitude. Regional differences in carbon storage between the two scenarios were largely driven by the balance between warming-enhanced decomposition and altered vegetation growth. Globally, interactive vegetation reduced albedo acting to enhance albedo changes due to climate change. This was mainly related to the darker land surface over high latitudes (due to vegetation expansion, particularly during December-January and March-May); small increases in albedo occurred over the Amazon. As a result, there was a relatively small impact of vegetation change on most global annual mean climate variables, which was generally greater under A1B than 2C20, with markedly stronger local-to-regional and seasonal impacts. Globally, vegetation change amplified future annual temperature increases by 0.24 and 0.15 K (under A1B and 2C20, respectively) and increased global precipitation, with reductions in precipitation over the Amazon and increases over high latitudes. In general, changes were stronger over land - for example, global temperature changes due to interactive vegetation of 0.43 and 0.28 K under A1B and 2C20, respectively. Regionally, the warming influence of future vegetation change in our simulations was driven by the balance between driving factors. For instance, reduced tree cover over the Amazon reduced evaporation (particularly during June-August), outweighing the cooling influence of any small albedo changes. In contrast, at high latitudes the warming impact of reduced albedo (particularly during December-February and March-May) due to increased vegetation cover appears to have offset any cooling due to small evaporation increases. Climate mitigation generally reduced the impact of vegetation change on future global and regional climate in our simulations. Our study therefore suggests that there is a need to consider both biogeochemical and biophysical effects in climate adaptation and mitigation decision making.

Land-use and climate change risks in the Amazon and the need of a novel sustainable development paradigm

PubMed Central

Nobre, Carlos A.; Sampaio, Gilvan; Borma, Laura S.; Castilla-Rubio, Juan Carlos; Silva, José S.; Cardoso, Manoel

2016-01-01

For half a century, the process of economic integration of the Amazon has been based on intensive use of renewable and nonrenewable natural resources, which has brought significant basin-wide environmental alterations. The rural development in the Amazonia pushed the agricultural frontier swiftly, resulting in widespread land-cover change, but agriculture in the Amazon has been of low productivity and unsustainable. The loss of biodiversity and continued deforestation will lead to high risks of irreversible change of its tropical forests. It has been established by modeling studies that the Amazon may have two “tipping points,” namely, temperature increase of 4 °C or deforestation exceeding 40% of the forest area. If transgressed, large-scale “savannization” of mostly southern and eastern Amazon may take place. The region has warmed about 1 °C over the last 60 y, and total deforestation is reaching 20% of the forested area. The recent significant reductions in deforestation—80% reduction in the Brazilian Amazon in the last decade—opens up opportunities for a novel sustainable development paradigm for the future of the Amazon. We argue for a new development paradigm—away from only attempting to reconcile maximizing conservation versus intensification of traditional agriculture and expansion of hydropower capacity—in which we research, develop, and scale a high-tech innovation approach that sees the Amazon as a global public good of biological assets that can enable the creation of innovative high-value products, services, and platforms through combining advanced digital, biological, and material technologies of the Fourth Industrial Revolution in progress. PMID:27638214

Land-use and climate change risks in the Amazon and the need of a novel sustainable development paradigm.

PubMed

Nobre, Carlos A; Sampaio, Gilvan; Borma, Laura S; Castilla-Rubio, Juan Carlos; Silva, José S; Cardoso, Manoel

2016-09-27

For half a century, the process of economic integration of the Amazon has been based on intensive use of renewable and nonrenewable natural resources, which has brought significant basin-wide environmental alterations. The rural development in the Amazonia pushed the agricultural frontier swiftly, resulting in widespread land-cover change, but agriculture in the Amazon has been of low productivity and unsustainable. The loss of biodiversity and continued deforestation will lead to high risks of irreversible change of its tropical forests. It has been established by modeling studies that the Amazon may have two "tipping points," namely, temperature increase of 4 °C or deforestation exceeding 40% of the forest area. If transgressed, large-scale "savannization" of mostly southern and eastern Amazon may take place. The region has warmed about 1 °C over the last 60 y, and total deforestation is reaching 20% of the forested area. The recent significant reductions in deforestation-80% reduction in the Brazilian Amazon in the last decade-opens up opportunities for a novel sustainable development paradigm for the future of the Amazon. We argue for a new development paradigm-away from only attempting to reconcile maximizing conservation versus intensification of traditional agriculture and expansion of hydropower capacity-in which we research, develop, and scale a high-tech innovation approach that sees the Amazon as a global public good of biological assets that can enable the creation of innovative high-value products, services, and platforms through combining advanced digital, biological, and material technologies of the Fourth Industrial Revolution in progress.

Land-use and climate change risks in the Amazon and the need of a novel sustainable development paradigm

NASA Astrophysics Data System (ADS)

Nobre, Carlos A.; Sampaio, Gilvan; Borma, Laura S.; Castilla-Rubio, Juan Carlos; Silva, José S.; Cardoso, Manoel

2016-09-01

For half a century, the process of economic integration of the Amazon has been based on intensive use of renewable and nonrenewable natural resources, which has brought significant basin-wide environmental alterations. The rural development in the Amazonia pushed the agricultural frontier swiftly, resulting in widespread land-cover change, but agriculture in the Amazon has been of low productivity and unsustainable. The loss of biodiversity and continued deforestation will lead to high risks of irreversible change of its tropical forests. It has been established by modeling studies that the Amazon may have two “tipping points,” namely, temperature increase of 4 °C or deforestation exceeding 40% of the forest area. If transgressed, large-scale “savannization” of mostly southern and eastern Amazon may take place. The region has warmed about 1 °C over the last 60 y, and total deforestation is reaching 20% of the forested area. The recent significant reductions in deforestation—80% reduction in the Brazilian Amazon in the last decade—opens up opportunities for a novel sustainable development paradigm for the future of the Amazon. We argue for a new development paradigm—away from only attempting to reconcile maximizing conservation versus intensification of traditional agriculture and expansion of hydropower capacity—in which we research, develop, and scale a high-tech innovation approach that sees the Amazon as a global public good of biological assets that can enable the creation of innovative high-value products, services, and platforms through combining advanced digital, biological, and material technologies of the Fourth Industrial Revolution in progress.

Atmosphere-biosphere exchange of CO2 and O3 in the Central Amazon Forest

NASA Technical Reports Server (NTRS)

Fan, Song-Miao; Wofsy, Steven C.; Bakwin, Peter S.; Jacob, Daniel J.; Fitzjarrald, David R.

1990-01-01

An eddy correlation measurement of O3 deposition and CO2 exchange at a level 10 m above the canopy of the Amazon forest, conducted as part of the NASA/INPE ABLE2b mission during the wet season of 1987, is presented. It was found that the ecosystem exchange of CO2 undergoes a well-defined diurnal variation driven by the input of solar radiation. A curvilinear relationship was found between solar irradiance and uptake of CO2, with net CO2 uptake at a given solar irradiance equal to rates observed over forests in other climate zones. The carbon balance of the system appeared sensitive to cloud cover on the time scale of the experiment, suggesting that global carbon storage might be affected by changes in insolation associated with tropical climate fluctuations. The forest was found to be an efficient sink for O3 during the day, and evidence indicates that the Amazon forests could be a significant sink for global ozone during the nine-month wet period and that deforestation could dramatically alter O3 budgets.

Ethnopharmacological inventory of plants used in Coronel Portillo Province of Ucayali Department, Peru.

PubMed

Polesna, Lucie; Polesny, Zbynek; Clavo, Mirella Z; Hansson, Anders; Kokoska, Ladislav

2011-02-01

Despite a rich tradition of folk medicinal usage of plants in the Peruvian Amazon, no studies documenting ethnobotanical information of Coronel Portillo Province of Ucayali Department have been published at an international level. This field research documented traditional ethnobotanical knowledge related to the local use of medicinal plants. Ethnobotanical data were collected in native communities around Pucallpa city (Coronel Portillo Province of Ucayali Department, Peru) and in the city itself during the period June-October 2007. The data were collected through direct interviews with 23 people. Uses of 30 plant species belonging to 18 families in traditional medicine are described in this article. Botanical and vernacular names, plant part used, popular medicinal use, forms of preparation and applications of the herbal remedies for each species are reported. Among investigated species, Brunfelsia grandiflora D. Don (Solanaceae), Calycophyllum spruceanum (Benth.) K. Schum. (Rubiaceae), Naucleopsis glabra Spruce (Moraceae), Phthirusa pyrifolia Eichler (Loranthaceae) were identified to be widely used in the studied area. However their beneficial health properties have not been well studied.

Phylogeography and Sex-Biased Dispersal across Riverine Manatee Populations (Trichechus inunguis and Trichechus manatus) in South America

PubMed Central

Satizábal, Paula; Mignucci-Giannoni, Antonio A.; Duchêne, Sebastián; Caicedo-Herrera, Dalila; Perea-Sicchar, Carlos M.; García-Dávila, Carmen R.; Trujillo, Fernando; Caballero, Susana J.

2012-01-01

Phylogeographic patterns and sex-biased dispersal were studied in riverine populations of West Indian (Trichechus manatus) and Amazonian manatees (T. inunguis) in South America, using 410bp D-loop (Control Region, Mitochondrial DNA) sequences and 15 nuclear microsatellite loci. This multi-locus approach was key to disentangle complex patterns of gene flow among populations. D-loop analyses revealed population structuring among all Colombian rivers for T. manatus, while microsatellite data suggested no structure. Two main populations of T. inunguis separating the Colombian and Peruvian Amazon were supported by analysis of the D-loop and microsatellite data. Overall, we provide molecular evidence for differences in dispersal patterns between sexes, demonstrating male-biased gene flow dispersal in riverine manatees. These results are in contrast with previously reported levels of population structure shown by microsatellite data in marine manatee populations, revealing low habitat restrictions to gene flow in riverine habitats, and more significant dispersal limitations for males in marine environments. PMID:23285054

Primers of glycosaminoglycan biosynthesis from Peruvian rain forest plants.

PubMed

Taylor, W H; Sinha, A; Khan, I A; McDaniel, S T; Esko, J D

1998-08-28

We have developed a rapid, high throughput screening assay for compounds that alter the assembly of glycosaminoglycan chains in Chinese hamster ovary cells. The assay uses autoradiography to measure the binding of newly synthesized [35S]proteoglycans and [35S]glycosaminoglycans to a positively charged membrane. Screening over 1000 extracts from a random plant collection obtained from the Amazon rain forest yielded five plants that stimulated glycosaminoglycan assembly in both wild-type cells and a mutant cell line defective in xylosyltransferase (the first committed enzyme involved in glycosaminoglycan biosynthesis). Fractionation of an extract of Maieta guianensis by silica gel and reverse-phase chromatography yielded two pure compounds with stimulatory activity. Spectroscopic analysis by NMR and mass spectrometry revealed that the active principles were xylosides of dimethylated ellagic acid. One of the compounds also contained a galloyl group at C-3 of the xylose moiety. These findings suggest that plants and other natural products may be a source of agents that can potentially alter glycosaminoglycan and proteoglycan formation in animal cells.

Environmental exposure and leptospirosis, Peru.

PubMed

Johnson, Michael A S; Smith, Hannah; Joeph, Priya; Gilman, Robert H; Bautista, Christian T; Campos, Kalina J; Cespedes, Michelle; Klatsky, Peter; Vidal, Carlos; Terry, Hilja; Calderon, Martiza M; Coral, Carlos; Cabrera, Lilia; Parmar, Paminder S; Vinetz, Joseph M

2004-06-01

Human infection by leptospires has highly variable clinical manifestations, which range from subclinical infection to fulminant disease. We conducted a population-based, cross-sectional seroepidemiologic study in Peru to determine potential relationships of environmental context to human exposure to Leptospira and disease associated with seroconversion. Three areas were studied: a flooded, urban slum in the Peruvian Amazon city of Iquitos; rural, peri-Iquitos villages; and a desert shantytown near Lima. Seroprevalence in Belen was 28% (182/650); in rural areas, 17% (52/316); and in a desert shantytown, 0.7% (1/150). Leptospira-infected peridomestic rats were found in all locales. In Belen, 20 (12.4%) of 161 patients seroconverted between dry and wet seasons (an incidence rate of 288/1,000). Seroconversion was associated with history of febrile illness; severe leptospirosis was not seen. Human exposure to Leptospira in the Iquitos region is high, likely related both to the ubiquity of leptospires in the environment and human behavior conducive to transmission from infected zoonotic sources.

An unusual strain of Venezuelan encephalitis virus existing sympatrically with subtype I-D strains in a Peruvian rain forest.

PubMed

Scherer, W F; Chin, J

1983-07-01

In 1971, an unusual strain of Venezuelan encephalitis (VE) virus (71D1252) was recovered from the same small area of a rain forest in the western Amazon basin of South America near Iquitos, Loreto, Peru, from which strains of subtype I-D were recovered. The marker characteristics of this strain resembled most closely those of VE subtype III (Mucambo) and were distinctly different from coexisting I-D strains. Thus the concurrent presence of two different VE virus subtypes in one place was a striking exception to the usual geographic allopatry of VE virus subtypes. Strain 71D1252 also contained temperature sensitive (ts) (37 degrees C versus 39 degrees C) virions in the original mosquito suspension and first suckling mouse passage brain tissue suspensions. It thus represents one of the few so-far-reported ts strains of viruses found in nature, and the only natural ts strain of VE virus.

Using "Journeys in Film" to Bring Authentic STEM Activities to the K-12 Classroom.

NASA Astrophysics Data System (ADS)

Rock, B. N.

2017-12-01

The "Journeys in Film" project brings important films and documentaries ("The Martian," "Hidden Figures," "River of Gold" and others) and curriculum-based, educational support activities to the classroom. Faculty from the University of New Hampshire, in partnership with selected local middle and high school teachers, developed a STEM Lesson Plan for Journeys in Film" focused on the soon-to-released documentary "River of Gold" which highlights tropical deforestation and illegal gold mining activities in the Peruvian jungles of the Amazon Basin. Using film clips (the Trailer) from the movie and the Lesson Plan, this approach allows pre-college students to learn how to use "Google Earth" to monitor chang-over-time and to quantify the areas of deforestation and mining using multi-date NOAA/USGS Landsat Thematic Mapper and ESA Copernicus satellite data. This approach will allow students to dconduct authentic hands-on science and mathematics to address a wide range of social and environmental issues associated with tropical deforestation in Peru.

Jubogaster towai, a new Neotropical genus and species of Trogastrini (Coleoptera: Staphylinidae: Pselaphinae) exhibiting myrmecophily and extreme body enlargement.

PubMed

Parker, Joseph; Maruyama, Munetoshi

2013-01-01

Jubogaster towai gen. et sp. nov. is described from a colony of Pheidole xanthogaster Wilson (Hymenoptera: Formicidae) in the Peruvian Amazon. The new taxon is amongst the largest pselaphine species known. Its transverse head implies an affinity with Trogastrini (Pselaphinae: Euplectitae), but J. towai lacks typical characters diagnostic for trogastrines and possesses others, such as a Jubini-like pronotum and equally-sized tarsal claws, that obscure its systematic relationships. To place J. towai phylogenetically, we sequenced a fragment of 28s rDNA for the new species and a range of other pselaphines, including members of Trogastrini and other tribes of Euplectitae. The topology produced by this analysis supports the inclusion of Jubogaster in Trogastrini, thereby indicating that morphology within this tribe can be more malleable than previously thought. Many of the largest pselaphine taxa are guests of social insect colonies. We discuss whether an evolutionary correlation (or causal relationship) exists between body enlargement and an inquilinous lifestyle in Pselaphinae.

‘Mystery big cats’ in the Peruvian Amazon: morphometrics solve a cryptozoological mystery

PubMed Central

Sakamoto, Manabu; Hocking, Peter; Sanchez, Gustavo

2014-01-01

Two big cat skulls procured from hunters of Yanachaga National Park, Peru, were reported as those of cats informally dubbed the ‘striped tiger’ and ‘anomalous jaguar’. Observations suggested that both skulls were distinct from those of jaguars, associated descriptions of integument did not conform to this species, and it has been implied that both represent members of one or two novel species. We sought to resolve the identity of the skulls using morphometrics. DNA could not be retrieved since both had been boiled as part of the defleshing process. We took 36 cranial and 13 mandibular measurements and added them to a database incorporating nearly 300 specimens of over 30 felid species. Linear discriminant analysis resolved both specimens as part of Panthera onca with high probabilities for cranial and mandibular datasets. Furthermore, the specimens exhibit characters typical of jaguars. If the descriptions of their patterning and pigmentation are accurate, we assume that both individuals were aberrant. PMID:24688867

Phylogeography and sex-biased dispersal across riverine manatee populations (Trichechus inunguis and Trichechus manatus) in South America.

PubMed

Satizábal, Paula; Mignucci-Giannoni, Antonio A; Duchêne, Sebastián; Caicedo-Herrera, Dalila; Perea-Sicchar, Carlos M; García-Dávila, Carmen R; Trujillo, Fernando; Caballero, Susana J

2012-01-01

Phylogeographic patterns and sex-biased dispersal were studied in riverine populations of West Indian (Trichechus manatus) and Amazonian manatees (T. inunguis) in South America, using 410bp D-loop (Control Region, Mitochondrial DNA) sequences and 15 nuclear microsatellite loci. This multi-locus approach was key to disentangle complex patterns of gene flow among populations. D-loop analyses revealed population structuring among all Colombian rivers for T. manatus, while microsatellite data suggested no structure. Two main populations of T. inunguis separating the Colombian and Peruvian Amazon were supported by analysis of the D-loop and microsatellite data. Overall, we provide molecular evidence for differences in dispersal patterns between sexes, demonstrating male-biased gene flow dispersal in riverine manatees. These results are in contrast with previously reported levels of population structure shown by microsatellite data in marine manatee populations, revealing low habitat restrictions to gene flow in riverine habitats, and more significant dispersal limitations for males in marine environments.

Trials of Improved Practices (TIPs): A Strategy for Making Long-Lasting Nets Last Longer?

PubMed Central

Harvey, Steven A.; Paredes Olórtegui, Maribel; Leontsini, Elli; Ramal Asayag, César; Scott, Kerry; Winch, Peter J.

2013-01-01

Long-lasting insecticidal net (LLIN) use is a proven malaria prevention method. Mass distribution has greatly expanded LLIN access in sub-Saharan Africa, but a gap remains between LLIN ownership and use. Furthermore, LLINs wear out more quickly than anticipated. This paper suggests a participatory research strategy—trials of improved practices (TIPs)—that could identify locally appropriate approaches to prolonging net life and increasing effective use. We used TIPs to overcome barriers to optimal net use in the Peruvian Amazon. Working with 15 families in three villages, we tested home treatment of cotton nets, use of an alternative netting fabric, and alternative washing and care instructions. TIPs helped confirm feasibility of these interventions. Although our findings are time- and context-specific, TIPs could help improve consistency and effectiveness of current LLIN use and prolong net lifespan in sub-Saharan Africa and elsewhere. This would help maximize the value of shrinking donor resources for malaria. PMID:23530074

Conservation genetics of harvested river turtles, Podocnemis expansa and Podocnemis unifilis, in the Peruvian Amazon: all roads lead to Iquitos.

PubMed

Pineda-Catalan, Oscar; Mendez, Martin; Gleizer, Anya; García-Dávila, Carmen; Aguirre, A Alonso; Pinedo-Vasquez, Miguel; Amato, George

2012-06-01

We present a mtDNA analysis of Podocnemis expansa (n = 81) and Podocnemis unifilis (n = 228) turtles traded in Peru to evaluate the potential origin of these animals. In particular, we were interested in the relationship between samples reported in the Iquitos markets (IMs) and a Pacaya Samiria Natural Reserve (PSNR) where illegal hunting is presumed. Our mtDNA data showed that, for both species, all haplotypes found within the PSNR were observed in the IM, and that these markets also displayed haplotypes not documented in the reserve. This suggests that the IMs are recipients of Podocnemis turtles from within and outside the PSNR. The fact that most of the haplotype diversity observed in the markets was not found within the PSNR strongly suggests that Podocnemis genetic diversity is exploited in areas where conservation actions are limited. Hence, we recommend expanding Podocnemis conservation efforts outside of protected areas.

The role of tropical deforestation in the global carbon cycle: Spatial and temporal dynamics

NASA Technical Reports Server (NTRS)

Houghton, R. A.; Skole, David; Moore, Berrien; Melillo, Jerry; Steudler, Paul

1995-01-01

'The Role of Tropical Deforestation in the Global Carbon cycle: Spatial and Temporal Dynamics', was a joint project involving the University of New Hampshire, the Marine Biological Laboratory, and the Woods Hole Research Center. The contribution of the Woods Hole Research Center consisted of three tasks: (1) assist University of New Hampshire in determining the net flux of carbon between the Brazilian Amazon and the atmosphere by means of a terrestrial carbon model; (2) address the spatial distribution of biomass across the Amazon Basin; and (3) assist NASA Headquarters in development of a science plan for the Terrestrial Ecology component of the NASA-Brazilian field campaign (anticipated for 1997-2001). Progress on these three tasks is briefly described.

Victimization among Peruvian Adolescents: Insights into Mental/Emotional Health from the Young Lives Study

ERIC Educational Resources Information Center

Lister, Cameron E.; Merrill, Ray M.; Vance, David L.; West, Joshua H.; Hall, Parley C.; Crookston, Benjamin T.

2015-01-01

Background: Bullying is a global problem among children and adolescents. The purpose of this study was to explore bully victimization in Peru and to identify potential adverse mental health and social outcomes resulting from bully victimization. Methods: This study analyzed data from an ongoing prospective cohort of children taking part in the…

DoD Global Emerging Infections Surveillance and Response System -- Partnering in the Fight Against Emerging Infections, Fiscal Year 2006

DTIC Science & Technology

2007-02-01

yellow fever outbreak in the remote Amazon jungle, and a plague and anthrax outbreak in northern Peru . Outside of Peru , epidemiologic and laboratory...V. Pacheco, U. Fajardo, and J.G. Olson. Serologic evidence of EMCV in rodents in Peru 2004-2005. Presented at the American Society of Tropical...Plasmodium falciparum in the Amazon region of Peru . Presented at the American Society of Tropical Medicine and Hygiene Annual Meeting, 2005 Dec; Washington

A crisis in the making: responses of Amazonian forests to land use and climate change.

PubMed

Laurance, W F

1998-10-01

At least three global-change phenomena are having major impacts on Amazonian forests: (1) accelerating deforestation and logging; (2) rapidly changing patterns of forest loss; and (3) interactions between human land-use and climatic variability. Additional alterations caused by climatic change, rising concentrations of atmospheric carbon dioxide, mining, overhunting and other large-scale phenomena could also have important effects on the Amazon ecosystem. Consequently, decisions regarding Amazon forest use in the next decade are crucial to its future existence.

Family Impact Scale (FIS): Cross-cultural Adaptation and Psychometric Properties for the Peruvian Spanish Language.

PubMed

Abanto, Jenny; Albites, Ursula; Bönecker, Marcelo; Paiva, Saul M; Castillo, Jorge L; Aguilar-Gálvez, Denisse

2015-12-01

The lack of a Family Impact Scale (FIS) in Spanish language limits its use as an indicator in Spanish-speaking countries and precludes comparisons with data from other cultural and ethnic groups. The purpose of this study was therefore to adapt the FIS cross-culturally to the Peruvian Spanish language and assess its reliability and validity. In order to translate and adapt the FIS cross-culturally, it was answered by 60 parents in two pilot tests, after which it was tested on 200 parents of children aged 11 to 14 years who were clinically examined for dental caries experience and malocclusions. Internal consistency was assessed by Cronbach's alpha coefficient while repeat administration of the FIS on the same 200 parents enabled the test-retest reliability to be assessed via intraclass correlation coefficient (ICC). Construct and discriminant validity were based on associations of the FIS with global ratings of oral health and clinical groups, respectively. Mean (standard deviation) FIS total score was 5.20 (5.86). Internal consistency was confirmed by Cronbach's alpha 0.84. Test-retest reliability revealed excellent reproducibility (ICC = 0.96). Construct validity was good, demonstrating statistically significant associations between total FIS score and global ratings of oral health (p=0.007) and overall wellbeing (p=0.002), as well as for the subscale scores (p<0.05) with exception of the financial burden subscale. The FIS was also able to discriminate between children with and without dental caries experience and malocclusions (p<0.05). Satisfactory psychometric results for the Peruvian Spanish FIS confirm it as a reliable, valid instrument for assessing the impact on the family caused by children's oral conditions. Sociedad Argentina de Investigación Odontológica.

Mining drives extensive deforestation in the Brazilian Amazon.

PubMed

Sonter, Laura J; Herrera, Diego; Barrett, Damian J; Galford, Gillian L; Moran, Chris J; Soares-Filho, Britaldo S

2017-10-18

Mining poses significant and potentially underestimated risks to tropical forests worldwide. In Brazil's Amazon, mining drives deforestation far beyond operational lease boundaries, yet the full extent of these impacts is unknown and thus neglected in environmental licensing. Here we quantify mining-induced deforestation and investigate the aspects of mining operations, which most likely contribute. We find mining significantly increased Amazon forest loss up to 70 km beyond mining lease boundaries, causing 11,670 km 2 of deforestation between 2005 and 2015. This extent represents 9% of all Amazon forest loss during this time and 12 times more deforestation than occurred within mining leases alone. Pathways leading to such impacts include mining infrastructure establishment, urban expansion to support a growing workforce, and development of mineral commodity supply chains. Mining-induced deforestation is not unique to Brazil; to mitigate adverse impacts of mining and conserve tropical forests globally, environmental assessments and licensing must considered both on- and off-lease sources of deforestation.

Sexual recombination is a signature of a persisting malaria epidemic in Peru

PubMed Central

2011-01-01

Background The aim of this study was to consider the impact that multi-clone, complex infections have on a parasite population structure in a low transmission setting. In general, complexity of infection (minimum number of clones within an infection) and the overall population level diversity is expected to be minimal in low transmission settings. Additionally, the parasite population structure is predicted to be clonal, rather than sexual due to infrequent parasite inoculation and lack of recombination between genetically distinct clones. However, in this low transmission of the Peruvian Amazon, complex infections are becoming more frequent, in spite of decreasing infection prevalence. In this study, it was hypothesized that sexual recombination between distinct clonal lineages of Plasmodium falciparum parasites were altering the subpopulation structure and effectively maintaining the population-level diversity. Methods Fourteen microsatellite markers were chosen to describe the genetic diversity in 313 naturally occurring P. falciparum infections from Peruvian Amazon. The population and subpopulation structure was characterized by measuring: clusteredness, expected heterozygosity (He), allelic richness, private allelic richness, and linkage disequilibrium. Next, microsatellite haplotypes and alleles were correlated with P. falciparum merozoite surface protein 1 Block 2 (Pfmsp1-B2) to examine the presence of recombinant microsatellite haplotypes. Results The parasite population structure consists of six genetically diverse subpopulations of clones, called "clusters". Clusters 1, 3, 4, and 6 have unique haplotypes that exceed 70% of the total number of clones within each cluster, while Clusters 2 and 5 have a lower proportion of unique haplotypes, but still exceed 46%. By measuring the He, allelic richness, and private allelic richness within each of the six subpopulations, relatively low levels of genetic diversity within each subpopulation (except Cluster 4) are observed. This indicated that the number of alleles, and not the combination of alleles, are limited. Next, the standard index of association (IAS) was measured, which revealed a significant decay in linkage disequilibrium (LD) associated with Cluster 6, which is indicative of independent assortment of alleles. This decay in LD is a signature of this subpopulation approaching linkage equilibrium by undergoing sexual recombination. To trace possible recombination events, the two most frequent microsatellite haplotypes observed over time (defined by either a K1 or Mad20) were selected as the progenitors and then potential recombinants were identified in within the natural population. Conclusions Contrary to conventional low transmission models, this study provides evidence of a parasite population structure that is superficially defined by a clonal backbone. Sexual recombination does occur and even arguably is responsible for maintaining the substructure of this population. PMID:22039962

Terrestrial Water Flux Responses to Global Warming in Tropical Rainforest Area

NASA Astrophysics Data System (ADS)

Lan, C. W.; Lo, M. H.; Kumar, S.

2016-12-01

Precipitation extremes are expected to become more frequent in the changing global climate, which may considerably affect the terrestrial hydrological cycle. In this study, Coupled Model Intercomparison Project Phase 5 (CMIP5) archives have been examined to explore the changes in normalized terrestrial water fluxes (TWFn) (precipitation minus evapotranspiration minus total runoff, divided by the precipitation climatology) in three tropical rainforest areas: Maritime Continent, Congo, and Amazon. Results reveal that a higher frequency of intense precipitation events is predicted for the Maritime Continent in the future climate than in the present climate, but not for the Amazon or Congo rainforests. Nonlinear responses to extreme precipitation lead to a reduced groundwater recharge and a proportionately greater amount of direct runoff, particularly for the Maritime Continent, where both the amount and intensity of precipitation increase under global warming. We suggest that the nonlinear response is related to the existence of a higher near-surface soil moisture over the Maritime Continent than that over the Amazon and Congo rainforests. The wetter soil over the Maritime Continent also leads to an increased subsurface runoff. Thus, increased precipitation extremes and concomitantly reduced terrestrial water fluxes (TWF) lead to an intensified hydrological cycle for the Maritime Continent. This has the potential to result in a strong temporal heterogeneity in soil water distribution affecting the ecosystem of the rainforest region and increasing the risk of flooding and/or landslides.

Terrestrial water flux responses to global warming in tropical rainforest areas

NASA Astrophysics Data System (ADS)

Lan, Chia-Wei; Lo, Min-Hui; Chou, Chia; Kumar, Sanjiv

2016-05-01

Precipitation extremes are expected to become more frequent in the changing global climate, which may considerably affect the terrestrial hydrological cycle. In this study, Coupled Model Intercomparison Project Phase 5 archives have been examined to explore the changes in normalized terrestrial water fluxes (precipitation minus evapotranspiration minus total runoff, divided by the precipitation climatology) in three tropical rainforest areas: Maritime Continent, Congo, and Amazon. Results show that a higher frequency of intense precipitation events is predicted for the Maritime Continent in the future climate than in the present climate, but not for the Amazon or Congo rainforests. Nonlinear responses to extreme precipitation lead to a reduced groundwater recharge and a proportionately greater amount of direct runoff, particularly for the Maritime Continent, where both the amount and intensity of precipitation increase under global warming. We suggest that the nonlinear response is related to the existence of a higher near-surface soil moisture over the Maritime Continent than that over the Amazon and Congo rainforests. The wetter soil over the Maritime Continent also leads to an increased subsurface runoff. Thus, increased precipitation extremes and concomitantly reduced terrestrial water fluxes lead to an intensified hydrological cycle for the Maritime Continent. This has the potential to result in a strong temporal heterogeneity in soil water distribution affecting the ecosystem of the rainforest region and increasing the risk of flooding and/or landslides.

Oil and gas projects in the Western Amazon: threats to wilderness, biodiversity, and indigenous peoples.

PubMed

Finer, Matt; Jenkins, Clinton N; Pimm, Stuart L; Keane, Brian; Ross, Carl

2008-08-13

The western Amazon is the most biologically rich part of the Amazon basin and is home to a great diversity of indigenous ethnic groups, including some of the world's last uncontacted peoples living in voluntary isolation. Unlike the eastern Brazilian Amazon, it is still a largely intact ecosystem. Underlying this landscape are large reserves of oil and gas, many yet untapped. The growing global demand is leading to unprecedented exploration and development in the region. We synthesized information from government sources to quantify the status of oil development in the western Amazon. National governments delimit specific geographic areas or "blocks" that are zoned for hydrocarbon activities, which they may lease to state and multinational energy companies for exploration and production. About 180 oil and gas blocks now cover approximately 688,000 km(2) of the western Amazon. These blocks overlap the most species-rich part of the Amazon. We also found that many of the blocks overlap indigenous territories, both titled lands and areas utilized by peoples in voluntary isolation. In Ecuador and Peru, oil and gas blocks now cover more than two-thirds of the Amazon. In Bolivia and western Brazil, major exploration activities are set to increase rapidly. Without improved policies, the increasing scope and magnitude of planned extraction means that environmental and social impacts are likely to intensify. We review the most pressing oil- and gas-related conservation policy issues confronting the region. These include the need for regional Strategic Environmental Impact Assessments and the adoption of roadless extraction techniques. We also consider the conflicts where the blocks overlap indigenous peoples' territories.

Oil and Gas Projects in the Western Amazon: Threats to Wilderness, Biodiversity, and Indigenous Peoples

PubMed Central

Finer, Matt; Jenkins, Clinton N.; Pimm, Stuart L.; Keane, Brian; Ross, Carl

2008-01-01

Background The western Amazon is the most biologically rich part of the Amazon basin and is home to a great diversity of indigenous ethnic groups, including some of the world's last uncontacted peoples living in voluntary isolation. Unlike the eastern Brazilian Amazon, it is still a largely intact ecosystem. Underlying this landscape are large reserves of oil and gas, many yet untapped. The growing global demand is leading to unprecedented exploration and development in the region. Methodology/Principal Findings We synthesized information from government sources to quantify the status of oil development in the western Amazon. National governments delimit specific geographic areas or “blocks” that are zoned for hydrocarbon activities, which they may lease to state and multinational energy companies for exploration and production. About 180 oil and gas blocks now cover ∼688,000 km2 of the western Amazon. These blocks overlap the most species-rich part of the Amazon. We also found that many of the blocks overlap indigenous territories, both titled lands and areas utilized by peoples in voluntary isolation. In Ecuador and Peru, oil and gas blocks now cover more than two-thirds of the Amazon. In Bolivia and western Brazil, major exploration activities are set to increase rapidly. Conclusions/Significance Without improved policies, the increasing scope and magnitude of planned extraction means that environmental and social impacts are likely to intensify. We review the most pressing oil- and gas-related conservation policy issues confronting the region. These include the need for regional Strategic Environmental Impact Assessments and the adoption of roadless extraction techniques. We also consider the conflicts where the blocks overlap indigenous peoples' territories. PMID:18716679

Trends in stunting and overweight in Peruvian pre-schoolers from 1991 to 2011: findings from the Demographic and Health Surveys.

PubMed

Urke, Helga Bjørnøy; Mittelmark, Maurice B; Valdivia, Martín

2014-11-01

To examine trends in stunting and overweight in Peruvian children, using 2006 WHO Multicentre Growth Reference Study criteria. Trend analyses using nationally representative cross-sectional surveys from Demographic and Health Surveys (1991-2011). We performed logistic regression analyses of stunting and overweight trends in sociodemographic groups (sex, age, urban-rural residence, region, maternal education and household wealth), adjusted for sampling design effects (strata, clusters and sampling weights). Peru. Children aged 0-59 months surveyed in 1991-92 (n 7999), 1996 (n 14 877), 2000 (n 11 754), 2007-08 (n 8232) and 2011 (n 8186). Child stunting declined (F(1, 5149) = 174·8, P ≤ 0·00) and child overweight was stable in the period 1991-2011 (F(1, 5147) = 0·4, P ≤ 0·54). Over the study period, levels of stunting were highest in rural compared with urban areas, the Andean and Amazon regions compared with the Coast, among children of low-educated mothers and among children living in households in the poorest wealth quintile. The trend in overweight rose among males in coastal areas (F(1, 2250) = 4·779, P ≤ 0·029) and among males in the richest wealth quintile (F(1, 1730) = 5·458, P ≤ 0·020). The 2011 levels of stunting and overweight were eight times and three and a half times higher, respectively, than the expected levels from the 2006 WHO growth standards. The trend over the study period in stunting declined in most sociodemographic subgroups. The trend in overweight was stable in most sociodemographic subgroups.

Interactions among Amazon land use, forests and climate: prospects for a near-term forest tipping point.

PubMed

Nepstad, Daniel C; Stickler, Claudia M; Filho, Britaldo Soares-; Merry, Frank

2008-05-27

Some model experiments predict a large-scale substitution of Amazon forest by savannah-like vegetation by the end of the twenty-first century. Expanding global demands for biofuels and grains, positive feedbacks in the Amazon forest fire regime and drought may drive a faster process of forest degradation that could lead to a near-term forest dieback. Rising worldwide demands for biofuel and meat are creating powerful new incentives for agro-industrial expansion into Amazon forest regions. Forest fires, drought and logging increase susceptibility to further burning while deforestation and smoke can inhibit rainfall, exacerbating fire risk. If sea surface temperature anomalies (such as El Niño episodes) and associated Amazon droughts of the last decade continue into the future, approximately 55% of the forests of the Amazon will be cleared, logged, damaged by drought or burned over the next 20 years, emitting 15-26Pg of carbon to the atmosphere. Several important trends could prevent a near-term dieback. As fire-sensitive investments accumulate in the landscape, property holders use less fire and invest more in fire control. Commodity markets are demanding higher environmental performance from farmers and cattle ranchers. Protected areas have been established in the pathway of expanding agricultural frontiers. Finally, emerging carbon market incentives for reductions in deforestation could support these trends.

How does a High Resolution Global Model represent Mesoscale Convective Systems over the Amazon Basin?

NASA Astrophysics Data System (ADS)

Rehbein, A.; Ambrizzi, T.

2017-12-01

The mesoscale convective systems (MCSs) are very important meteorological systems, which can impact on the local, regional and global climate. Despite of their importance, the knowledge about their occurrence and behavior is still poor, mainly over the tropical region of South America where the data availability is scarce. Besides, few attentions are given to represent the MCSs in the numerical modeling in that region. The aim of the present work is to evaluate the representation of the MCSs by a global high resolution model over the Amazon basin. In this study, we will make a revision of the state of art involving the MCSs' over the Amazon basin and also how they are represented. For this last point, we will identify and track the MCSs using precipitation data from a high resolution nonhydrostatic global model, called Non-hydrostatic ICosahedral Atmospheric Model (NICAM). The spatial and temporal resolution of NICAM are 14 km and 1 hour, respectively. The MCSs identification and tracking will be performed by the algorithm Forecast and Tracking the evolution of Cloud Clusters (ForTraCC) for the period of 2000 to 2008. This will allow us evaluate the representation of the MCSs obtained by NICAM and compare them with those found using infrared satellite images. NICAM's precipitation was validated using Climate Hazards Group InfraRed Precipitation with Station data (CHIRPS), from 1981 to 2008. Once the model is validated, we will analyze the variability of the MCSs using the simulations of the NICAM for a future climate.

IAI Global Change Agenda and Support of Higher Education in the Andean Amazon Countries.

NASA Astrophysics Data System (ADS)

Galarraga, R.; McClain, M.; Fierro, V.

2007-05-01

The Andean Amazon River Analysis and Management project, an IAI Collaborative Research Network operating during 1999-2004, examined the impacts of climate and land-use changes on the hydrobiogeochemistry of rivers draining the Amazon Andes of Ecuador, Peru, Colombia and Bolivia. The project also provided a means to strengthen scientific collaboration among these Andean countries and the USA. Research in these countries was carried out under the guidance of investigators with backgrounds in the relevant environmental fields, but the bulk of the research activities were carried out by undergraduate and graduate students who studied within these countries and overseas. Twenty graduate students and 15 undergraduates completed studies within the project, in topics related to monitoring hydrometeorological variables both in time and space. Student research and capacity building were focused in areas central to global environmental change, including modeling of precipitation and precipitation-runoff processes, basin-scale water quality characterization and biogeochemical cycling, and socioeconomic controls on the use and management of riverine resources. The analysis of human dimension aspects of climate change research was also featured, especially those aspects that linked the consequences of water quality degradation on human health. Most of undergraduate and graduate students that collaborated in the AARAM project have joined national environmental institutions and some have continued for higher scientific degrees in fields closely related to the IAI scientific agenda. Through this IAI initiative, the number of trained global change scientists in the Andean countries has grown and there is enhanced awareness of key global change science issues among the scientific community.

An extensive reef system at the Amazon River mouth

PubMed Central

Moura, Rodrigo L.; Amado-Filho, Gilberto M.; Moraes, Fernando C.; Brasileiro, Poliana S.; Salomon, Paulo S.; Mahiques, Michel M.; Bastos, Alex C.; Almeida, Marcelo G.; Silva, Jomar M.; Araujo, Beatriz F.; Brito, Frederico P.; Rangel, Thiago P.; Oliveira, Braulio C. V.; Bahia, Ricardo G.; Paranhos, Rodolfo P.; Dias, Rodolfo J. S.; Siegle, Eduardo; Figueiredo, Alberto G.; Pereira, Renato C.; Leal, Camille V.; Hajdu, Eduardo; Asp, Nils E.; Gregoracci, Gustavo B.; Neumann-Leitão, Sigrid; Yager, Patricia L.; Francini-Filho, Ronaldo B.; Fróes, Adriana; Campeão, Mariana; Silva, Bruno S.; Moreira, Ana P. B.; Oliveira, Louisi; Soares, Ana C.; Araujo, Lais; Oliveira, Nara L.; Teixeira, João B.; Valle, Rogerio A. B.; Thompson, Cristiane C.; Rezende, Carlos E.; Thompson, Fabiano L.

2016-01-01

Large rivers create major gaps in reef distribution along tropical shelves. The Amazon River represents 20% of the global riverine discharge to the ocean, generating up to a 1.3 × 106–km2 plume, and extensive muddy bottoms in the equatorial margin of South America. As a result, a wide area of the tropical North Atlantic is heavily affected in terms of salinity, pH, light penetration, and sedimentation. Such unfavorable conditions were thought to imprint a major gap in Western Atlantic reefs. We present an extensive carbonate system off the Amazon mouth, underneath the river plume. Significant carbonate sedimentation occurred during lowstand sea level, and still occurs in the outer shelf, resulting in complex hard-bottom topography. A permanent near-bottom wedge of ocean water, together with the seasonal nature of the plume’s eastward retroflection, conditions the existence of this extensive (~9500 km2) hard-bottom mosaic. The Amazon reefs transition from accretive to erosional structures and encompass extensive rhodolith beds. Carbonate structures function as a connectivity corridor for wide depth–ranging reef-associated species, being heavily colonized by large sponges and other structure-forming filter feeders that dwell under low light and high levels of particulates. The oxycline between the plume and subplume is associated with chemoautotrophic and anaerobic microbial metabolisms. The system described here provides several insights about the responses of tropical reefs to suboptimal and marginal reef-building conditions, which are accelerating worldwide due to global changes. PMID:27152336

Soil carbon dynamics

NASA Astrophysics Data System (ADS)

Trumbore, Susan; Barbosa de Camargo, Plínio

The amount of organic carbon (C) stored in the upper meter of mineral soils in the Amazon Basin (˜40 Pg C) represents ˜3% of the estimated global store of soil carbon. Adding surface detrital C stocks and soil carbon deeper than 1 m can as much as quadruple this estimate. The potential for Amazon soil carbon to respond to changes in land use, climate, or atmospheric composition depends on the form and dynamics of soil carbon. Much (˜30% in the top ˜10 cm but >85% in soils to 1 m depth) of the carbon in mineral soils of the Oxisols and Ultisols that are the predominant soil types in the Amazon Basin is in forms that are strongly stabilized, with mean ages of centuries to thousands of years. Measurable changes in soil C stocks that accompany land use/land cover change occur in the upper meter of soil, although the presence of deep roots in forests systems drives an active C cycle at depths >1 m. Credible estimates of the potential for changes in Amazon soil C stocks with future land use and climate change are much smaller than predictions of aboveground biomass change. Soil organic matter influences fertility and other key soil properties, and thus is important independent of its role in the global C cycle. Most work on C dynamics is limited to upland soils, and more is needed to investigate C dynamics in poorly drained soils. Work is also needed to relate cycles of C with water, N, P, and other elements.

An extensive reef system at the Amazon River mouth.

PubMed

Moura, Rodrigo L; Amado-Filho, Gilberto M; Moraes, Fernando C; Brasileiro, Poliana S; Salomon, Paulo S; Mahiques, Michel M; Bastos, Alex C; Almeida, Marcelo G; Silva, Jomar M; Araujo, Beatriz F; Brito, Frederico P; Rangel, Thiago P; Oliveira, Braulio C V; Bahia, Ricardo G; Paranhos, Rodolfo P; Dias, Rodolfo J S; Siegle, Eduardo; Figueiredo, Alberto G; Pereira, Renato C; Leal, Camille V; Hajdu, Eduardo; Asp, Nils E; Gregoracci, Gustavo B; Neumann-Leitão, Sigrid; Yager, Patricia L; Francini-Filho, Ronaldo B; Fróes, Adriana; Campeão, Mariana; Silva, Bruno S; Moreira, Ana P B; Oliveira, Louisi; Soares, Ana C; Araujo, Lais; Oliveira, Nara L; Teixeira, João B; Valle, Rogerio A B; Thompson, Cristiane C; Rezende, Carlos E; Thompson, Fabiano L

2016-04-01

Large rivers create major gaps in reef distribution along tropical shelves. The Amazon River represents 20% of the global riverine discharge to the ocean, generating up to a 1.3 × 10(6)-km(2) plume, and extensive muddy bottoms in the equatorial margin of South America. As a result, a wide area of the tropical North Atlantic is heavily affected in terms of salinity, pH, light penetration, and sedimentation. Such unfavorable conditions were thought to imprint a major gap in Western Atlantic reefs. We present an extensive carbonate system off the Amazon mouth, underneath the river plume. Significant carbonate sedimentation occurred during lowstand sea level, and still occurs in the outer shelf, resulting in complex hard-bottom topography. A permanent near-bottom wedge of ocean water, together with the seasonal nature of the plume's eastward retroflection, conditions the existence of this extensive (~9500 km(2)) hard-bottom mosaic. The Amazon reefs transition from accretive to erosional structures and encompass extensive rhodolith beds. Carbonate structures function as a connectivity corridor for wide depth-ranging reef-associated species, being heavily colonized by large sponges and other structure-forming filter feeders that dwell under low light and high levels of particulates. The oxycline between the plume and subplume is associated with chemoautotrophic and anaerobic microbial metabolisms. The system described here provides several insights about the responses of tropical reefs to suboptimal and marginal reef-building conditions, which are accelerating worldwide due to global changes.

Recent variations in Amazon carbon balance driven by climate anomalies

NASA Astrophysics Data System (ADS)

Miller, J. B.

2015-12-01

Understanding tropical rainforest response to heat and drought is critical for quantifying the effects of climate change on tropical ecosystems, including global climate-carbon feedbacks. Of particular importance for the global carbon budget is net ecosystem exchange of CO2 with the atmosphere (NEE), a metric that represents the total integrated signal of carbon fluxes into and out of ecosystems. Sub-annual and sub-basin NEE estimates have previously been derived from process-based biosphere models, despite often disagreeing with plot-scale observations. Our analysis of airborne CO2 and CO measurements reveals monthly, sub-Basin scale (~106 km2) NEE variations in a framework that is largely independent of bottom-up estimates. As such, our approach provides new insights about tropical forest response to climate. We find acute sensitivity of NEE to daily and monthly climate extremes. In particular, increased central-Amazon NEE was associated with wet-season heat and dry-season drought in 2010. We analyze satellite proxies for photosynthesis and find that suppression of photosynthesis may have contributed to increased carbon loss in the 2010 drought, consistent with recent analysis of plot-scale measurements. In the eastern Amazon, pulses of increased NEE (i.e. net respiration) persisted through 2011, suggesting legacy effects of the drought that occurred in 2010. Regional differences in post-drought recovery in 2011 and 2012 appear related to long-term water availability. These results provide novel evidence of the vulnerability of Amazon carbon stocks to short-term temperature and moisture extremes.

Initialization of Cloud and Radiation in the Florida State University Global Spectral Model

DTIC Science & Technology

1990-01-01

come home." My son will soon learn to throw the football farther and harder. My daughter will have one more guest at her tea parties. I love you all very... Peruvian Current keep the sea surface temperatures cool in this area. The Andes Mountain chain also has cool surface temperatures due to its high

The evolution of organic matter along the lower Amazon River continuum - Óbidos to the ocean

NASA Astrophysics Data System (ADS)

Ward, N. D.; Keil, R. G.; Medeiros, P. M.; Brito, D.; Cunha, A.; Sawakuchi, H. O.; Moura, J. S.; Yager, P. L.; Krusche, A. V.; Richey, J. E.

2013-12-01

The influence of the Amazon River on global hydrologic and biogeochemical cycling is well recognized. The Amazon River provides roughly 16% of the global freshwater supply to the ocean and is a significant source of CO2 to the atmosphere, outgassing 0.5 Pg C y-1 to the atmosphere--a flux roughly equivalent to the amount of carbon 'sequestered' by the Amazon rainforest (Field et al, 1998; Richey et al., 2002; Malhi et al., 2008). However, much of our understanding of the flux of matter from the Amazon River into the Atlantic Ocean (and atmosphere) is limited to measurements made at and upstream of Óbidos, 900 km upstream from the actual river mouth. Further, there are few to no observations documenting the transformation of organic matter in a parcel of water as it travels downstream of Óbidos into the ocean. Here we explore the hydrological and biogeochemical evolution of the lower Amazon River continuum, from Óbidos to the Atlantic Ocean. A suite of dissolved and particulate organic matter (OM) parameters were measured during a series of five river expeditions with stations at Óbidos, the Tapajós tributary, the mouth of the Lago Grande de Curuai floodplain lake, both the north and south channels of the Amazon River mouth near Macapá, and the confluence of the Amazon and Tocantins Rivers near Belém. In addition to bulk carbon isotopic signatures, a suite of biomarkers including dissolved and particulate lignin-derived phenols were measured to trace the sources and degradation history of terrestrial vascular plant derived OM throughout the continuum. Dissolved and particulate lignin phenol concentrations both correlated positively with river discharge in the Amazon River mainstem, with variable export patterns from the tributaries and floodplains. As organic matter travels along the continuum it is degraded by microbial composition, fuelling gross respiration and CO2 outgassing. The flux of organic carbon to the ocean is chemically recalcitrant as a result of the constant biological processing of labile OM throughout the lower river. We estimate that 40% of the vascular plant-derived organic carbon sequestered by the terrestrial biosphere is degraded within soils, 55% is degraded along the river continuum, and less than 5% is delivered to the ocean (Ward et al., 2013) References Cited Field, C., M. Behrenfeld, J. Randerson, and P. Falkowski. 1998. Primary production of the biosphere: Integrating terrestrial and oceanic components. Science 281, 237-240. Malhi, Y., Roberts, J.T., Betts, R.A., Killeen, T.J., Li, W., Nobre, C.A. 2008. Climate change, deforestation, and the fate of the Amazon. Science 319, 169-172. Richey, J. E., Melack, J. M., Aufdenkampe, A. K., Ballester, V. M. & Hess, L. L. 2002. Outgassing from Amazonian rivers and wetlands as a large tropical source of atmospheric CO2. Nature 416, 617-620. Ward, N.D.; Keil, R.G.; Medeiros, P.M.; Brito, D.C.; Cunha, A.C.; Dittmar, T.; Yager, P.L.; Krusche, A.V.; Richey, J.E. 2013. Degradation of terrestrially derived macromolecules in the Amazon River. Nature Geoscience. doi: 10.1038/ngeo1817

Evaluation of antihyperglycemia and antihypertension potential of native Peruvian fruits using in vitro models.

PubMed

Pinto, Marcia Da Silva; Ranilla, Lena Galvez; Apostolidis, Emmanouil; Lajolo, Franco Maria; Genovese, Maria Inés; Shetty, Kalidas

2009-04-01

Local food diversity and traditional crops are essential for cost-effective management of the global epidemic of type 2 diabetes and associated complications of hypertension. Water and 12% ethanol extracts of native Peruvian fruits such as Lucuma (Pouteria lucuma), Pacae (Inga feuille), Papayita arequipeña (Carica pubescens), Capuli (Prunus capuli), Aguaymanto (Physalis peruviana), and Algarrobo (Prosopis pallida) were evaluated for total phenolics, antioxidant activity based on 2, 2-diphenyl-1-picrylhydrazyl radical scavenging assay, and functionality such as in vitro inhibition of alpha-amylase, alpha-glucosidase, and angiotensin I-converting enzyme (ACE) relevant for potential management of hyperglycemia and hypertension linked to type 2 diabetes. The total phenolic content ranged from 3.2 (Aguaymanto) to 11.4 (Lucuma fruit) mg/g of sample dry weight. A significant positive correlation was found between total phenolic content and antioxidant activity for the ethanolic extracts. No phenolic compound was detected in Lucuma (fruit and powder) and Pacae. Aqueous extracts from Lucuma and Algarrobo had the highest alpha-glucosidase inhibitory activities. Papayita arequipeña and Algarrobo had significant ACE inhibitory activities reflecting antihypertensive potential. These in vitro results point to the excellent potential of Peruvian fruits for food-based strategies for complementing effective antidiabetes and antihypertension solutions based on further animal and clinical studies.

Future drying of the southern Amazon and central Brazil

NASA Astrophysics Data System (ADS)

Yoon, J.; Zeng, N.; Cook, B.

2008-12-01

Recent climate modeling suggests that the Amazon rainforest could exhibit considerable dieback under future climate change, a prediction that has raised considerable interest as well as controversy. To determine the likelihood and causes of such changes, we analyzed the output of 15 models from the Intergovernmental Panel on Climate Change Fourth Assessment Report (IPCC/AR4) and a dynamic vegetation model VEGAS driven by these climate output. Our results suggest that the core of the Amazon rainforest should remain largely stable. However, the periphery, notably the southern edge, is in danger of drying out, driven by two main processes. First, a decline in precipitation of 24% in the southern Amazon lengthens the dry season and reduces soil moisture, despite of an increase in precipitation during the wet season, due to the nonlinear response in hydrology and ecosystem dynamics. Two dynamical mechanisms may explain the lower dry season precipitation: (1) a stronger north-south tropical Atlantic sea surface temperature gradient; (2) a general subtropical drying under global warming when the dry season southern Amazon is under the control of the subtropical high pressure. Secondly, evaporation will increase due to the general warming, thus also reducing soil moisture. As a consequence, the median of the models projects a reduction of vegetation by 20%, and enhanced fire carbon flux by 10-15% in the southern Amazon, central Brazil, and parts of the Andean Mountains. Because the southern Amazon is also under intense human influence, the double pressure of deforestation and climate change may subject the region to dramatic changes in the 21st century.

Idealized Simulations of the Effects of Amazon Convection and Baroclinic Waves on the South Atlantic Convergence Zone

NASA Technical Reports Server (NTRS)

Ferreira, Rosana Nieto; Suarez, Max J.; Nigam, Sumant; Einaudi, Franco (Technical Monitor)

2001-01-01

The South Atlantic Convergence Zone (SACZ) is a NW-SE oriented, stationary region of enhanced convergence and convection that extends southeastward from the ITCZ convection anchored over the Amazon region. On daily satellite images each SACZ episode is seen as a progression of one or several midlatitude cold fronts that intrude into the subtropics and tropics, becoming stationary over southeastern Brazil for a few days. Previous studies have shown that while Amazon convection plays a fundamental role in the formation of the SACZ, Atlantic sea surface temperatures and the Andes Mountains play a relatively minor role in the strength and location of the SACZ. The role of interactions between Amazon convection and midlatitude baroclinic waves in establishing the origin, position, and maintenance of the SACZ is studied here using idealized dry, multilayer global model simulations that do not include the effects of topography. The model simulations produce SACZ-like regions of low-level convergence in the presence of Amazon convection embedded in a mean-flow that contains propagating baroclinic waves. The results of these simulations indicate that Amazon convection plays two fundamental roles in the formation and location of the SACZ. First, it produces a NW-SE oriented region of low-level convergence to the SE of Amazon convection. Second, it produces a storm-track region and accompanying stronger midlatitude baroclinic waves in the region of the SACZ. It is suggested that in the presence of moist effects, the 'seedling' SACZ regions produced in these simulations can be enhanced to produce the observed SACZ.

Higher absorbed solar radiation partly offset the negative effects of water stress on the photosynthesis of Amazon forests during the 2015 drought

NASA Astrophysics Data System (ADS)

Li, Xing; Xiao, Jingfeng; He, Binbin

2018-04-01

Amazon forests play an important role in the global carbon cycle and Earth’s climate. The vulnerability of Amazon forests to drought remains highly controversial. Here we examine the impacts of the 2015 drought on the photosynthesis of Amazon forests to understand how solar radiation and precipitation jointly control forest photosynthesis during the severe drought. We use a variety of gridded vegetation and climate datasets, including solar-induced chlorophyll fluorescence (SIF), photosynthetic active radiation (PAR), the fraction of absorbed PAR (APAR), leaf area index (LAI), precipitation, soil moisture, cloud cover, and vapor pressure deficit (VPD) in our analysis. Satellite-derived SIF observations provide a direct diagnosis of plant photosynthesis from space. The decomposition of SIF to SIF yield (SIFyield) and APAR (the product of PAR and fPAR) reveals the relative effects of precipitation and solar radiation on photosynthesis. We found that the drought significantly reduced SIFyield, the emitted SIF per photon absorbed. The higher APAR resulting from lower cloud cover and higher LAI partly offset the negative effects of water stress on the photosynthesis of Amazon forests, leading to a smaller reduction in SIF than in SIFyield and precipitation. We further found that SIFyield anomalies were more sensitive to precipitation and VPD anomalies in the southern regions of the Amazon than in the central and northern regions. Our findings shed light on the relative and combined effects of precipitation and solar radiation on photosynthesis, and can improve our understanding of the responses of Amazon forests to drought.

Epidemiology of Plasmodium vivax Malaria in Peru.

PubMed

Rosas-Aguirre, Angel; Gamboa, Dionicia; Manrique, Paulo; Conn, Jan E; Moreno, Marta; Lescano, Andres G; Sanchez, Juan F; Rodriguez, Hugo; Silva, Hermann; Llanos-Cuentas, Alejandro; Vinetz, Joseph M

2016-12-28

Malaria in Peru, dominated by Plasmodium vivax, remains a public health problem. The 1990s saw newly epidemic malaria emerge, primarily in the Loreto Department in the Amazon region, including areas near to Iquitos, the capital city, but sporadic malaria transmission also occurred in the 1990s-2000s in both north-coastal Peru and the gold mining regions of southeastern Peru. Although a Global Fund-supported intervention (PAMAFRO, 2005-2010) was temporally associated with a decrease of malaria transmission, from 2012 to the present, both P. vivax and Plasmodium falciparum malaria cases have rapidly increased. The Peruvian Ministry of Health continues to provide artemesinin-based combination therapy for microscopy-confirmed cases of P. falciparum and chloroquine-primaquine for P. vivax Malaria transmission continues in remote areas nonetheless, where the mobility of humans and parasites facilitates continued reintroduction outside of ongoing surveillance activities, which is critical to address for future malaria control and elimination efforts. Ongoing P. vivax research gaps in Peru include the following: identification of asymptomatic parasitemics, quantification of the contribution of patent and subpatent parasitemics to mosquito transmission, diagnosis of nonparasitemic hypnozoite carriers, and implementation of surveillance for potential emergence of chloroquine- and 8-aminoquinoline-resistant P. vivax Clinical trials of tafenoquine in Peru have been promising, and glucose-6-phosphate dehydrogenase deficiency in the region has not been observed to be a limitation to its use. Larger-scale challenges for P. vivax (and malaria in general) in Peru include logistical difficulties in accessing remote riverine populations, consequences of government policy and poverty trends, and obtaining international funding for malaria control and elimination. © The American Society of Tropical Medicine and Hygiene.

The acid and alkalinity budgets of weathering in the Andes-Amazon system: Insights into the erosional control of global biogeochemical cycles

NASA Astrophysics Data System (ADS)

Torres, Mark A.; West, A. Joshua; Clark, Kathryn E.; Paris, Guillaume; Bouchez, Julien; Ponton, Camilo; Feakins, Sarah J.; Galy, Valier; Adkins, Jess F.

2016-09-01

The correlation between chemical weathering fluxes and denudation rates suggests that tectonic activity can force variations in atmospheric pCO2 by modulating weathering fluxes. However, the effect of weathering on pCO2 is not solely determined by the total mass flux. Instead, the effect of weathering on pCO2 also depends upon the balance between 1) alkalinity generation by carbonate and silicate mineral dissolution and 2) sulfuric acid generation by the oxidation of sulfide minerals. In this study, we explore how the balance between acid and alkalinity generation varies with tectonic uplift to better understand the links between tectonics and the long-term carbon cycle. To trace weathering reactions across the transition from the Peruvian Andes to the Amazonian foreland basin, we measured a suite of elemental concentrations (Na, K, Ca, Mg, Sr, Si, Li, SO4, and Cl) and isotopic ratios (87Sr/86Sr and δ34S) on both dissolved and solid phase samples. Using an inverse model, we quantitatively link systematic changes in solute geochemistry with elevation to downstream declines in sulfuric acid weathering as well as the proportion of cations sourced from silicates. With a new carbonate-system framework, we show that weathering in the Andes Mountains is a CO2 source whereas foreland weathering is a CO2 sink. These results are consistent with the theoretical expectation that the ratio of sulfide oxidation to silicate weathering increases with increasing erosion. Altogether, our results suggest that the effect of tectonically-enhanced weathering on atmospheric pCO2 is strongly modulated by sulfide mineral oxidation.

Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon

DOE Office of Scientific and Technical Information (OSTI.GOV)

Silva, Bruno S. de O.; Coutinho, Felipe H.; Gregoracci, Gustavo B.

ABSTRACT The Amazon River watershed and its associated plume comprise a vast continental and oceanic area. The microbial activities along this continuum contribute substantially to global carbon and nutrient cycling, and yet there is a dearth of information on the diversity, abundance, and possible roles of viruses in this globally important river. The aim of this study was to elucidate the diversity and structure of virus assemblages of the Amazon River-ocean continuum. Environmental viral DNA sequences were obtained for 12 locations along the river’s lower reach (n= 5) and plume (n= 7). Sequence assembly yielded 29,358 scaffolds, encoding 82,546 viralmore » proteins, with 15 new complete viral genomes. Despite the spatial connectivity mediated by the river, virome analyses and physical-chemical water parameters clearly distinguished river and plume ecosystems. Bacteriophages were ubiquitous in the continuum and were more abundant in the transition region. Eukaryotic viruses occurred mostly in the river, while the plume had more viruses of autotrophic organisms (Prochlorococcus,Synechococcus) and heterotrophic bacteria (Pelagibacter). The viral familiesMicroviridaeandMyoviridaewere the most abundant and occurred throughout the continuum. The major functions of the genes in the continuum involved viral structures and life cycles, and viruses from plume locations and Tapajós River showed the highest levels of functional diversity. The distribution patterns of the viral assemblages were defined not only by the occurrence of possible hosts but also by water physical and chemical parameters, especially salinity. The findings presented here help to improve understanding of the possible roles of viruses in the organic matter cycle along the river-ocean continuum. IMPORTANCEThe Amazon River forms a vast plume in the Atlantic Ocean that can extend for more than 1,000 km. Microbial communities promote a globally relevant carbon sink system in the plume. Despite the importance of viruses for the global carbon cycle, the diversity and the possible roles of viruses in the Amazon are poorly understood. The present work assesses, for the first time, the abundance and diversity of viruses simultaneously in the river and ocean in order to elucidate their possible roles. DNA sequence assembly yielded 29,358 scaffolds, encoding 82,546 viral proteins, with 15 new complete viral genomes from the 12 river and ocean locations. Viral diversity was clearly distinguished by river and ocean. Bacteriophages were the most abundant and occurred throughout the continuum. Viruses that infect eukaryotes were more abundant in the river, whereas phages appeared to have strong control over the host prokaryotic populations in the plume.« less

Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon.

PubMed

Silva, Bruno S de O; Coutinho, Felipe H; Gregoracci, Gustavo B; Leomil, Luciana; de Oliveira, Louisi S; Fróes, Adriana; Tschoeke, Diogo; Soares, Ana Carolina; Cabral, Anderson S; Ward, Nicholas D; Richey, Jeffrey E; Krusche, Alex V; Yager, Patricia L; de Rezende, Carlos Eduardo; Thompson, Cristiane C; Thompson, Fabiano L

2017-01-01

The Amazon River watershed and its associated plume comprise a vast continental and oceanic area. The microbial activities along this continuum contribute substantially to global carbon and nutrient cycling, and yet there is a dearth of information on the diversity, abundance, and possible roles of viruses in this globally important river. The aim of this study was to elucidate the diversity and structure of virus assemblages of the Amazon River-ocean continuum. Environmental viral DNA sequences were obtained for 12 locations along the river's lower reach ( n = 5) and plume ( n = 7). Sequence assembly yielded 29,358 scaffolds, encoding 82,546 viral proteins, with 15 new complete viral genomes. Despite the spatial connectivity mediated by the river, virome analyses and physical-chemical water parameters clearly distinguished river and plume ecosystems. Bacteriophages were ubiquitous in the continuum and were more abundant in the transition region. Eukaryotic viruses occurred mostly in the river, while the plume had more viruses of autotrophic organisms ( Prochlorococcus , Synechococcus ) and heterotrophic bacteria ( Pelagibacter ). The viral families Microviridae and Myoviridae were the most abundant and occurred throughout the continuum. The major functions of the genes in the continuum involved viral structures and life cycles, and viruses from plume locations and Tapajós River showed the highest levels of functional diversity. The distribution patterns of the viral assemblages were defined not only by the occurrence of possible hosts but also by water physical and chemical parameters, especially salinity. The findings presented here help to improve understanding of the possible roles of viruses in the organic matter cycle along the river-ocean continuum. IMPORTANCE The Amazon River forms a vast plume in the Atlantic Ocean that can extend for more than 1,000 km. Microbial communities promote a globally relevant carbon sink system in the plume. Despite the importance of viruses for the global carbon cycle, the diversity and the possible roles of viruses in the Amazon are poorly understood. The present work assesses, for the first time, the abundance and diversity of viruses simultaneously in the river and ocean in order to elucidate their possible roles. DNA sequence assembly yielded 29,358 scaffolds, encoding 82,546 viral proteins, with 15 new complete viral genomes from the 12 river and ocean locations. Viral diversity was clearly distinguished by river and ocean. Bacteriophages were the most abundant and occurred throughout the continuum. Viruses that infect eukaryotes were more abundant in the river, whereas phages appeared to have strong control over the host prokaryotic populations in the plume.

Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon

PubMed Central

Silva, Bruno S. de O.; Coutinho, Felipe H.; Gregoracci, Gustavo B.; Leomil, Luciana; de Oliveira, Louisi S.; Fróes, Adriana; Tschoeke, Diogo; Soares, Ana Carolina; Cabral, Anderson S.; Ward, Nicholas D.; Richey, Jeffrey E.; Krusche, Alex V.; Yager, Patricia L.; de Rezende, Carlos Eduardo; Thompson, Cristiane C.

2017-01-01

ABSTRACT The Amazon River watershed and its associated plume comprise a vast continental and oceanic area. The microbial activities along this continuum contribute substantially to global carbon and nutrient cycling, and yet there is a dearth of information on the diversity, abundance, and possible roles of viruses in this globally important river. The aim of this study was to elucidate the diversity and structure of virus assemblages of the Amazon River-ocean continuum. Environmental viral DNA sequences were obtained for 12 locations along the river’s lower reach (n = 5) and plume (n = 7). Sequence assembly yielded 29,358 scaffolds, encoding 82,546 viral proteins, with 15 new complete viral genomes. Despite the spatial connectivity mediated by the river, virome analyses and physical-chemical water parameters clearly distinguished river and plume ecosystems. Bacteriophages were ubiquitous in the continuum and were more abundant in the transition region. Eukaryotic viruses occurred mostly in the river, while the plume had more viruses of autotrophic organisms (Prochlorococcus, Synechococcus) and heterotrophic bacteria (Pelagibacter). The viral families Microviridae and Myoviridae were the most abundant and occurred throughout the continuum. The major functions of the genes in the continuum involved viral structures and life cycles, and viruses from plume locations and Tapajós River showed the highest levels of functional diversity. The distribution patterns of the viral assemblages were defined not only by the occurrence of possible hosts but also by water physical and chemical parameters, especially salinity. The findings presented here help to improve understanding of the possible roles of viruses in the organic matter cycle along the river-ocean continuum. IMPORTANCE The Amazon River forms a vast plume in the Atlantic Ocean that can extend for more than 1,000 km. Microbial communities promote a globally relevant carbon sink system in the plume. Despite the importance of viruses for the global carbon cycle, the diversity and the possible roles of viruses in the Amazon are poorly understood. The present work assesses, for the first time, the abundance and diversity of viruses simultaneously in the river and ocean in order to elucidate their possible roles. DNA sequence assembly yielded 29,358 scaffolds, encoding 82,546 viral proteins, with 15 new complete viral genomes from the 12 river and ocean locations. Viral diversity was clearly distinguished by river and ocean. Bacteriophages were the most abundant and occurred throughout the continuum. Viruses that infect eukaryotes were more abundant in the river, whereas phages appeared to have strong control over the host prokaryotic populations in the plume. PMID:28989970

Simulating fire regimes in the Amazon in response to climate change and deforestation.

PubMed

Silvestrini, Rafaella Almeida; Soares-Filho, Britaldo Silveira; Nepstad, Daniel; Coe, Michael; Rodrigues, Hermann; Assunção, Renato

2011-07-01

Fires in tropical forests release globally significant amounts of carbon to the atmosphere and may increase in importance as a result of climate change. Despite the striking impacts of fire on tropical ecosystems, the paucity of robust spatial models of forest fire still hampers our ability to simulate tropical forest fire regimes today and in the future. Here we present a probabilistic model of human-induced fire occurrence for the Amazon that integrates the effects of a series of anthropogenic factors with climatic conditions described by vapor pressure deficit. The model was calibrated using NOAA-12 night satellite hot pixels for 2003 and validated for the years 2002, 2004, and 2005. Assessment of the fire risk map yielded fitness values > 85% for all months from 2002 to 2005. Simulated fires exhibited high overlap with NOAA-12 hot pixels regarding both spatial and temporal distributions, showing a spatial fit of 50% within a radius of 11 km and a maximum yearly frequency deviation of 15%. We applied this model to simulate fire regimes in the Amazon until 2050 using IPCC's A2 scenario climate data from the Hadley Centre model and a business-as-usual (BAU) scenario of deforestation and road expansion from SimAmazonia. Results show that the combination of these scenarios may double forest fire occurrence outside protected areas (PAs) in years of extreme drought, expanding the risk of fire even to the northwestern Amazon by midcentury. In particular, forest fires may increase substantially across southern and southwestern Amazon, especially along the highways slated for paving and in agricultural zones. Committed emissions from Amazon forest fires and deforestation under a scenario of global warming and uncurbed deforestation may amount to 21 +/- 4 Pg of carbon by 2050. BAU deforestation may increase fires occurrence outside PAs by 19% over the next four decades, while climate change alone may account for a 12% increase. In turn, the combination of climate change and deforestation would boost fire occurrence outside PAs by half during this period. Our modeling results, therefore, confirm the synergy between the two Ds of REDD (Reducing Emissions from Deforestation and Forest Degradation in Developing Countries).

Characterization of Particle Backscattering of Global Highly Turbid Waters From VIIRS Ocean Color Observations

NASA Astrophysics Data System (ADS)

Shi, Wei; Wang, Menghua

2017-11-01

Normalized water-leaving radiance spectra nLw(λ) at the near-infrared (NIR) from five years of observations (2012-2016) with the Visible Infrared Imaging Radiometer Suite (VIIRS) onboard the Suomi National Polar-orbiting Partnership (SNPP) are used to derive the particle backscattering coefficients bbp(λ) for global highly turbid coastal and inland waters. Based on the fact that the absorption coefficient of sea water aw(λ) is generally much larger than those of the other constituents aiop(λ) at the NIR wavelengths in coastal and inland waters, an NIR-based bbp(λ) algorithm for turbid coastal and inland waters has been developed and used in this study. This algorithm can be safely used for highly turbid waters with nLw(745) and nLw(862) < ˜6 and ˜4 mW cm-2 μm-1 sr-1, respectively. Seasonal and interannual variations of bbp(λ) in China's east coastal region, the Amazon River Estuary, the La Plata River Estuary, the Meghna River Estuary, the Atchafalaya River Estuary, and Lake Taihu are characterized and quantified. The coefficient bbp(λ) can reach over ˜3-4 m-1 in the Amazon River Estuary and China's east coastal region. The Amazon River Estuary is identified as the most turbid region in the global ocean in terms of bbp(λ) magnitude. bbp(λ) spectra in these five highly turbid regions are also seasonal-dependent and regional-dependent. In the highly turbid waters of China's east coastal region and the Amazon River Estuary, bbp(λ) generally increases in wavelength from 410 to 862 nm, while it decreases in the La Plata River Estuary and Atchafalaya River Estuary. This is attributed to the different particle size distributions in these waters. The geophysical implication of the bbp(λ) spectral curvatures for different waters is discussed. To improve global bbp(λ) for both open oceans and coastal turbid waters, a new combined NIR-based and Quasi-Analytical Algorithm (QAA)-based bbp(λ) algorithm is proposed and demonstrated.

The Amazon reveals its secrets--partly

USGS Publications Warehouse

Betancourt, Julio L.

2000-01-01

The role of the tropics in global climate change during glacial cycles is hotly debated in paleoclimate cycles today. Records from South America have not provided a clear picture of tropical climate change. In his Perspective, Betancourt highlights the study by Maslin and Burns, who have deduced the outflow of the Amazon over the past 14,000 years. This may serve as a proxy that integrates hydrology over the entire South American tropics, although the record must be interpreted cautiously because factors other than rainfall may contribute to the variability in outflow.

Methane emissions from floodplains in the Amazon Basin: towards a process-based model for global applications

NASA Astrophysics Data System (ADS)

Ringeval, B.; Houweling, S.; van Bodegom, P. M.; Spahni, R.; van Beek, R.; Joos, F.; Röckmann, T.

2013-10-01

Tropical wetlands are estimated to represent about 50% of the natural wetland emissions and explain a large fraction of the observed CH4 variability on time scales ranging from glacial-interglacial cycles to the currently observed year-to-year variability. Despite their importance, however, tropical wetlands are poorly represented in global models aiming to predict global CH4 emissions. This study documents the first regional-scale, process-based model of CH4 emissions from tropical floodplains. The LPX-Bern Dynamic Global Vegetation Model (LPX hereafter) was modified to represent floodplain hydrology, vegetation and associated CH4 emissions. The extent of tropical floodplains was prescribed using output from the spatially-explicit hydrology model PCR-GLOBWB. We introduced new Plant Functional Types (PFTs) that explicitly represent floodplain vegetation. The PFT parameterizations were evaluated against available remote sensing datasets (GLC2000 land cover and MODIS Net Primary Productivity). Simulated CH4 flux densities were evaluated against field observations and regional flux inventories. Simulated CH4 emissions at Amazon Basin scale were compared to model simulations performed in the WETCHIMP intercomparison project. We found that LPX simulated CH4 flux densities are in reasonable agreement with observations at the field scale but with a~tendency to overestimate the flux observed at specific sites. In addition, the model did not reproduce between-site variations or between-year variations within a site. Unfortunately, site informations are too limited to attest or disprove some model features. At the Amazon Basin scale, our results underline the large uncertainty in the magnitude of wetland CH4 emissions. In particular, uncertainties in floodplain extent (i.e., difference between GLC2000 and PCR-GLOBWB output) modulate the simulated emissions by a factor of about 2. Our best estimates, using PCR-GLOBWB in combination with GLC2000, lead to simulated Amazon-integrated emissions of 44.4 ± 4.8 Tg yr-1. Additionally, the LPX emissions are highly sensitive to vegetation distribution. Two simulations with the same mean PFT cover, but different spatial distributions of grasslands within the basin modulated emissions by about 20%. Correcting the LPX simulated NPP using MODIS reduces the Amazon emissions by 11.3%. Finally, due to an intrinsic limitation of LPX to account for seasonality in floodplain extent, the model failed to reproduce the seasonality in CH4 emissions. The Inter Annual Variability (IAV) of the emissions increases by 90% if the IAV in floodplain extent is account for, but still remains lower than in most of WETCHIMP models. While our model includes more mechanisms specific to tropical floodplains, we were unable to reduce the uncertainty in the magnitude of wetland CH4 emissions of the Amazon Basin. Our results stress the need for more research to constrain floodplain CH4 emissions and their temporal variability.

Rereading Ventura García Calderón

ERIC Educational Resources Information Center

Goldberg, Nancy Sloan

2014-01-01

Ventura García Calderón (1886-1959) was a Peruvian man of letters and a diplomat who was at the center of the hispanophone community in Paris in the first half of the twentieth century. Known as a proponent of Spanish American literature, García Calderón achieved a global celebrity for his dramatic, colorful, and ironic short stories. These…

Tree rings and rainfall in the equatorial Amazon

NASA Astrophysics Data System (ADS)

Granato-Souza, Daniela; Stahle, David W.; Barbosa, Ana Carolina; Feng, Song; Torbenson, Max C. A.; de Assis Pereira, Gabriel; Schöngart, Jochen; Barbosa, Joao Paulo; Griffin, Daniel

2018-05-01

The Amazon basin is a global center of hydroclimatic variability and biodiversity, but there are only eight instrumental rainfall stations with continuous records longer than 80 years in the entire basin, an area nearly the size of the coterminous US. The first long moisture-sensitive tree-ring chronology has been developed in the eastern equatorial Amazon of Brazil based on dendrochronological analysis of Cedrela cross sections cut during sustainable logging operations near the Rio Paru. The Rio Paru chronology dates from 1786 to 2016 and is significantly correlated with instrumental precipitation observations from 1939 to 2016. The strength and spatial scale of the precipitation signal vary during the instrumental period, but the Rio Paru chronology has been used to develop a preliminary reconstruction of February to November rainfall totals from 1786 to 2016. The reconstruction is related to SSTs in the Atlantic and especially the tropical Pacific, similar to the stronger pattern of association computed for the instrumental rainfall data from the eastern Amazon. The tree-ring data estimate extended drought and wet episodes in the mid- to late-nineteenth century, providing a valuable, long-term perspective on the moisture changes expected to emerge over the Amazon in the coming century due to deforestation and anthropogenic climate change.

Separating the Effects of Tropical Atlantic and Pacific SST-driven Climate Variability on Amazon Carbon Exchange

NASA Astrophysics Data System (ADS)

Liptak, J.; Keppel-Aleks, G.

2016-12-01

Amazon forests store an estimated 25% percent of global terrestrial carbon per year1, 2, but the responses of Amazon carbon uptake to climate change is highly uncertain. One source of this uncertainty is tropical sea surface temperature variability driven by teleconnections. El Nino-Southern Oscillation (ENSO) is a key driver of year-to-year Amazon carbon exchange, with associated temperature and precipitation changes favoring net carbon storage in La Nina years, and net carbon release during El Nino years3. To determine how Amazon climate and terrestrial carbon fluxes react to ENSO alone and in concert with other SST-driven teleconnections such as the Atlantic Multidecadal Oscillation (AMO), we force the atmosphere (CAM5) and land (CLM4) components of the CESM(BGC) with prescribed monthly SSTs over the period 1950—2014 in a Historical control simulation. We then run an experiment (PAC) with time-varying SSTs applied only to the tropical equatorial Pacific Ocean, and repeating SST seasonal cycle climatologies elsewhere. Limiting SST variability to the equatorial Pacific indicates that other processes enhance ENSO-driven Amazon climate anomalies. Compared to the Historical control simulation, warming, drying and terrestrial carbon loss over the Amazon during El Nino periods are lower in the PAC simulation, especially prior to 1990 during the cool phase of the AMO. Cooling, moistening, and net carbon uptake during La Nina periods are also reduced in the PAC simulation, but differences are greater after 1990 during the warm phase of the AMO. By quantifying the relationships among climate drivers and carbon fluxes in the Historical and PAC simulations, we both assess the sensitivity of these relationships to the magnitude of ENSO forcing and quantify how other teleconnections affect ENSO-driven Amazon climate feedbacks. We expect that these results will help us improve hypotheses for how Atlantic and Pacific climate trends will affect future Amazon carbon carbon cycling. Pan, Y. et al. A large and persistent carbon sink in the world's forests. Science 333, 988-993 (2011) Brienen, Roel J. W. et al. Long-term decline of the Amazon carbon sink. Nature 519, 344-348 (2015) Botta, A. et al. Long-term variations of climate and carbon fluxes over the Amazon basin. Geophys. Res. Lett. 29 (2002)

Seasonal dynamics in methane emissions from the Amazon River floodplain to the troposphere

NASA Technical Reports Server (NTRS)

Devol, Allan H.; Richey, Jeffrey E.; Forsberg, Bruce R.; Martinelli, Luiz A.

1990-01-01

Methane fluxes to the troposphere from the three principal habitats of the floodplain of the Amazon River main stem (open waters, emergent macrophyte beds, and flooded forests) were determined along a 1700-km reach of the river during the low-water period of the annual flood cycle (November-December 1988). Overall, emissions averaged 68 mg CH4/sq m per day and were significantly lower than similar emissions determined previously for the high-water period, 184 mg CH4/sq m per day (July-August 1986). This difference was due to significantly lower emissions from floating macrophyte environments. Low-water emissions from open waters and flooded forest areas were not significantly different than at high water. A monthly time series of methane emission from eight lakes located in the central Amazon basis showed similar results. The data were used to calculate a seasonally weighted annual emission to the troposphere from the Amazon River main stem floodplain of 5.1 Tg/yr, which indicates the importance of the area in global atmospheric chemistry.

Potential sensitivity of photosynthesis and isoprene emission to direct radiative effects of atmospheric aerosol pollution

NASA Astrophysics Data System (ADS)

Strada, Susanna; Unger, Nadine

2016-04-01

A global Earth system model is applied to quantify the impacts of direct anthropogenic aerosol effective radiative forcing on gross primary productivity (GPP) and isoprene emission. The impacts of different pollution aerosol sources (anthropogenic, biomass burning, and non-biomass burning) are investigated by performing sensitivity experiments. The model framework includes all known light and meteorological responses of photosynthesis, but uses fixed canopy structures and phenology. On a global scale, our results show that global land carbon fluxes (GPP and isoprene emission) are not sensitive to pollution aerosols, even under a global decline in surface solar radiation (direct + diffuse) by ˜ 9 %. At a regional scale, GPP and isoprene emission show a robust but opposite sensitivity to pollution aerosols in regions where forested canopies dominate. In eastern North America and Eurasia, anthropogenic pollution aerosols (mainly from non-biomass burning sources) enhance GPP by +5-8 % on an annual average. In the northwestern Amazon Basin and central Africa, biomass burning aerosols increase GPP by +2-5 % on an annual average, with a peak in the northwestern Amazon Basin during the dry-fire season (+5-8 %). The prevailing mechanism varies across regions: light scattering dominates in eastern North America, while a reduction in direct radiation dominates in Europe and China. Aerosol-induced GPP productivity increases in the Amazon and central Africa include an additional positive feedback from reduced canopy temperatures in response to increases in canopy conductance. In Eurasia and northeastern China, anthropogenic pollution aerosols drive a decrease in isoprene emission of -2 to -12 % on an annual average. Future research needs to incorporate the indirect effects of aerosols and possible feedbacks from dynamic carbon allocation and phenology.

Tropical forest response to elevated CO2: Model-experiment integration at the AmazonFACE site.

NASA Astrophysics Data System (ADS)

Frankenberg, C.; Berry, J. A.; Guanter, L.; Joiner, J.

2014-12-01

The terrestrial biosphere's response to current and future elevated atmospheric carbon dioxide (eCO2) is a large source of uncertainty in future projections of the C cycle, climate and ecosystem functioning. In particular, the sensitivity of tropical rainforest ecosystems to eCO­2 is largely unknown even though the importance of tropical forests for biodiversity, carbon storage and regional and global climate feedbacks is unambiguously recognized. The AmazonFACE (Free-Air Carbon Enrichment) project will be the first ecosystem scale eCO2 experiment undertaken in the tropics, as well as the first to be undertaken in a mature forest. AmazonFACE provides the opportunity to integrate ecosystem modeling with experimental observations right from the beginning of the experiment, harboring a two-way exchange, i.e. models provide hypotheses to be tested, and observations deliver the crucial data to test and improve ecosystem models. We present preliminary exploration of observed and expected process responses to eCO2 at the AmazonFACE site from the dynamic global vegetation model LPJ-GUESS, highlighting opportunities and pitfalls for model integration of tropical FACE experiments. The preliminary analysis provides baseline hypotheses, which are to be further developed with a follow-up multiple model inter-comparison. The analysis builds on the recently undertaken FACE-MDS (Model-Data Synthesis) project, which was applied to two temperate FACE experiments and exceeds the traditional focus on comparing modeled end-target output. The approach has proven successful in identifying well (and less well) represented processes in models, which are separated for six clusters also here; (1) Carbon fluxes, (2) Carbon pools, (3) Energy balance, (4) Hydrology, (5) Nutrient cycling, and (6) Population dynamics. Simulation performance of observed conditions at the AmazonFACE site (a.o. from Manaus K34 eddy flux tower) will highlight process-based model deficiencies, and aid the separation of uncertainties arising from general ecosystem responses and those responses related to eCO2.

Amazon rainforest responses to elevated CO2: Deriving model-based hypotheses for the AmazonFACE experiment

NASA Astrophysics Data System (ADS)

Rammig, A.; Fleischer, K.; Lapola, D.; Holm, J.; Hoosbeek, M.

2017-12-01

Increasing atmospheric CO2 concentration is assumed to have a stimulating effect ("CO2 fertilization effect") on forest growth and resilience. Empirical evidence, however, for the existence and strength of such a tropical CO2 fertilization effect is scarce and thus a major impediment for constraining the uncertainties in Earth System Model projections. The implications of the tropical CO2 effect are far-reaching, as it strongly influences the global carbon and water cycle, and hence future global climate. In the scope of the Amazon Free Air CO2 Enrichment (FACE) experiment, we addressed these uncertainties by assessing the CO2 fertilization effect at ecosystem scale. AmazonFACE is the first FACE experiment in an old-growth, highly diverse tropical rainforest. Here, we present a priori model-based hypotheses for the experiment derived from a set of 12 ecosystem models. Model simulations identified key uncertainties in our understanding of limiting processes and derived model-based hypotheses of expected ecosystem responses to elevated CO2 that can directly be tested during the experiment. Ambient model simulations compared satisfactorily with in-situ measurements of ecosystem carbon fluxes, as well as carbon, nitrogen, and phosphorus stocks. Models consistently predicted an increase in photosynthesis with elevated CO2, which declined over time due to developing limitations. The conversion of enhanced photosynthesis into biomass, and hence ecosystem carbon sequestration, varied strongly among the models due to different assumptions on nutrient limitation. Models with flexible allocation schemes consistently predicted an increased investment in belowground structures to alleviate nutrient limitation, in turn accelerating turnover rates of soil organic matter. The models diverged on the prediction for carbon accumulation after 10 years of elevated CO2, mainly due to contrasting assumptions in their phosphorus cycle representation. These differences define the expected response ratio to elevated CO2 at the AmazonFACE site and identify priorities for experimental work and model development.

Tropical forest response to elevated CO2: Model-experiment integration at the AmazonFACE site.

NASA Astrophysics Data System (ADS)

Fleischer, K.

2015-12-01

The terrestrial biosphere's response to current and future elevated atmospheric carbon dioxide (eCO2) is a large source of uncertainty in future projections of the C cycle, climate and ecosystem functioning. In particular, the sensitivity of tropical rainforest ecosystems to eCO­2 is largely unknown even though the importance of tropical forests for biodiversity, carbon storage and regional and global climate feedbacks is unambiguously recognized. The AmazonFACE (Free-Air Carbon Enrichment) project will be the first ecosystem scale eCO2 experiment undertaken in the tropics, as well as the first to be undertaken in a mature forest. AmazonFACE provides the opportunity to integrate ecosystem modeling with experimental observations right from the beginning of the experiment, harboring a two-way exchange, i.e. models provide hypotheses to be tested, and observations deliver the crucial data to test and improve ecosystem models. We present preliminary exploration of observed and expected process responses to eCO2 at the AmazonFACE site from the dynamic global vegetation model LPJ-GUESS, highlighting opportunities and pitfalls for model integration of tropical FACE experiments. The preliminary analysis provides baseline hypotheses, which are to be further developed with a follow-up multiple model inter-comparison. The analysis builds on the recently undertaken FACE-MDS (Model-Data Synthesis) project, which was applied to two temperate FACE experiments and exceeds the traditional focus on comparing modeled end-target output. The approach has proven successful in identifying well (and less well) represented processes in models, which are separated for six clusters also here; (1) Carbon fluxes, (2) Carbon pools, (3) Energy balance, (4) Hydrology, (5) Nutrient cycling, and (6) Population dynamics. Simulation performance of observed conditions at the AmazonFACE site (a.o. from Manaus K34 eddy flux tower) will highlight process-based model deficiencies, and aid the separation of uncertainties arising from general ecosystem responses and those responses related to eCO2.

Tree-Ring Reconstruction of Wet Season Rainfall Totals in the Amazon

NASA Astrophysics Data System (ADS)

Stahle, D. W.; Lopez, L.; Granato-Souza, D.; Barbosa, A. C. M. C.; Torbenson, M.; Villalba, R.; Pereira, G. D. A.; Feng, S.; Schongart, J.; Cook, E. R.

2017-12-01

The Amazon Basin is a globally important center of deep atmospheric convection, energy balance, and biodiversity, but only a handful of weather stations in this vast Basin have recorded rainfall measurements for at least 50 years. The available rainfall and river level observations suggest that the hydrologic cycle in the Amazon may have become amplified in the last 40-years, with more extreme rainfall and streamflow seasonality, deeper droughts, and more severe flooding. These changes in the largest hydrological system on earth may be early evidence of the expected consequences of anthropogenic climate change and deforestation in the coming century. Placing these observed and simulated changes in the context of natural climate variability during the late Holocene is a significant challenge for high-resolution paleoclimatology. We have developed exactly dated and well-replicated annual tree-ring chronologies from two native Amazonian tree species (Cedrela sp and Centrolobium microchaete). These moisture sensitive chronologies have been used to compute two reconstructions of wet season rainfall totals, one in the southern Amazon based on Centrolobium and another in the eastern equatorial Amazon using Cedrela. Both reconstructions are over 200-years long and extend the available instrumental observations in each region by over 150-years. These reconstructions are well correlated with the same regional and large-scale climate dynamics that govern the inter-annual variability of the instrumental wet season rainfall totals. Increased multi-decadal variability is reconstructed after 1950 with the Centrolobium chronologies in the southern Amazon. The Cedrela reconstruction from the eastern Amazon exhibits changes in the spatial pattern of correlation with regional rainfall stations and the large-scale sea surface temperature field after 1990 that may be consistent with recent changes in the mean position of the Inter-Tropical Convergence Zone in March over the western Atlantic and South American sector.

Effects of seasonality and land-use change on carbon and water fluxes across the Amazon basin: synthesizing results from satellite-based remote sensing, towers, and models

NASA Astrophysics Data System (ADS)

Saleska, S.; Goncalves, L. G.; Baker, I.; Costa, M.; Poulter, B.; Christoffersen, B.; Da Rocha, H. R.; Didan, K.; Huete, A.; Imbuziero, H.; Kruijt, B.; Manzi, A.; von Randow, C.; Restrepo-Coupe, N.; Silva, R.; Tota, J.; Denning, S.; Gulden, L.; Rosero, E.; Zeng, X.

2008-12-01

Amazon forests play an important and complex role in the global carbon cycle, and important advances have been made in understanding Amazon processes in recent years. However, reconciling modeled mechanisms of carbon cycling with observations across scales remains a challenge. To better address this challenge, we initiated a Model intercomparison Project for the 'Large-Scale Biosphere Atmosphere Experiment in Amazonia' (LBA-MIP) to integrate modeling and observational studies for improved understanding of Amazon basin carbon cycling. Here, we report on the initial results of this project, which used the network of meteorological and climate data (sunlight, radiation, precipitation) from Amazon tower sites in forest and converted lands to drive a suite of 20 ecosystem models that simulate energy, water and CO2 fluxes. We compared model mechanisms to each other and to the relevant flux observations from those towers, as well as from satellite data from the Moderate Resolution Imaging Spectroradiometer (MODIS). Remote sensing and flux tower observations tend to show higher primary forest photosynthetic activity in the dry season than in the wet season in central Amazon, a broad pattern that is now captured in many models, but for different reasons. A reversal from the primary forest pattern was observed in areas converted to pasture, agriculture, or secondary forests, likely a consequence of the elimination of deep root access to deep soil waters which often persist through the dry season. Testing the models with observed fluxes under different land use patterns, and across different spatial scales with remote sensing, is enabling us to distinguish correct vs. incorrect model mechanisms and improve understanding of Amazon processes.

Global warming and climate change in Amazonia: Climate-vegetation feedback and impacts on water resources

NASA Astrophysics Data System (ADS)

Marengo, José; Nobre, Carlos A.; Betts, Richard A.; Cox, Peter M.; Sampaio, Gilvan; Salazar, Luis

This chapter constitutes an updated review of long-term climate variability and change in the Amazon region, based on observational data spanning more than 50 years of records and on climate-change modeling studies. We start with the early experiments on Amazon deforestation in the late 1970s, and the evolution of these experiments to the latest studies on greenhouse gases emission scenarios and land use changes until the end of the twenty-first century. The "Amazon dieback" simulated by the HadCM3 model occurs after a "tipping point" of CO2 concentration and warming. Experiments on Amazon deforestation and change of climate suggest that once a critical deforestation threshold (or tipping point) of 40-50% forest loss is reached in eastern Amazonia, climate would change in a way which is dangerous for the remaining forest. This may favor a collapse of the tropical forest, with a substitution of the forest by savanna-type vegetation. The concept of "dangerous climate change," as a climate change, which induces positive feedback, which accelerate the change, is strongly linked to the occurrence of tipping points, and it can be explained as the presence of feedback between climate change and the carbon cycle, particularly involving a weakening of the current terrestrial carbon sink and a possible reversal from a sink (as in present climate) to a source by the year 2050. We must, therefore, currently consider the drying simulated by the Hadley Centre model(s) as having a finite probability under global warming, with a potentially enormous impact, but with some degree of uncertainty.

Combined effects of climate change and forest clearing on the Amazon vegetation: Projections for 2080-2100

NASA Astrophysics Data System (ADS)

Cook, K. H.; Vizy, E. K.

2007-05-01

A regional climate model with resolution of 60 km coupled with a potential vegetation model is used to simulate future vegetation distributions over South America. The coupled model, which produces an accurate representation of today's climate and vegetation, is forced with increasing atmospheric CO2 concentrations, sea surface temperature from a global model, and scenarios of future land use practices to predict climate and vegetation distributions for the last 2 decades of the 21st century. When only climate change is considered, under a business-as-usual scenario for global emissions, the extent of the Amazon rainforest is reduced by about 70 per cent by the end of this century, and the shrubland (caatinga) vegetation of Brazil's Nordeste region spreads westward and southward. Reductions in annual mean precipitation are widespread and rainfall becomes insufficient to support the rainforest in these regions, but some areas receive more precipitation. The length of the dry season increases in the central and southern Amazon in association with changes in the large-scale tropical circulation. Without this change in seasonality, local refugia of Amazon vegetation would be preserved and the retreat of the rainforest would be somewhat less extensive. Including various projections of future land use practices in addition to climate change may accelerate the unrecoverable demise of the rainforest and feedback to modify climate on regional space scales. The portions of the rainforest that are most vulnerable to climate change are the same as those that are under the most pressure from human activity, presenting a remarkable competition.

Seasonality and interannual variability of CH4 fluxes from the eastern Amazon Basin inferred from atmospheric mole fraction profiles.

PubMed

Basso, Luana S; Gatti, Luciana V; Gloor, Manuel; Miller, John B; Domingues, Lucas G; Correia, Caio S C; Borges, Viviane F

2016-01-16

The Amazon Basin is an important region for global CH 4 emissions. It hosts the largest area of humid tropical forests, and around 20% of this area is seasonally flooded. In a warming climate it is possible that CH 4 emissions from the Amazon will increase both as a result of increased temperatures and precipitation. To examine if there are indications of first signs of such changes we present here a 13 year (2000-2013) record of regularly measured vertical CH 4 mole fraction profiles above the eastern Brazilian Amazon, sensitive to fluxes from the region upwind of Santarém (SAN), between SAN and the Atlantic coast. Using a simple mass balance approach, we find substantial CH 4 emissions with an annual average flux of 52.8 ± 6.8 mg CH 4 m -2  d -1 over an area of approximately 1 × 10 6  km 2 . Fluxes are highest in two periods of the year: in the beginning of the wet season and during the dry season. Using a CO:CH 4 emission factor estimated from the profile data, we estimated a contribution of biomass burning of around 15% to the total flux in the dry season, indicating that biogenic emissions dominate the CH 4 flux. This 13 year record shows that CH 4 emissions upwind of SAN varied over the years, with highest emissions in 2008 (around 25% higher than in 2007), mainly during the wet season, representing 19% of the observed global increase in this year.

Early recruitment responses to interactions between frequent fires, nutrients, and herbivory in the southern Amazon.

PubMed

Massad, Tara Joy; Balch, Jennifer K; Mews, Cândida Lahís; Porto, Pábio; Marimon Junior, Ben Hur; Quintino, Raimundo Mota; Brando, P M; Vieira, Simone A; Trumbore, Susan E

2015-07-01

Understanding tropical forest diversity is a long-standing challenge in ecology. With global change, it has become increasingly important to understand how anthropogenic and natural factors interact to determine diversity. Anthropogenic increases in fire frequency are among the global change variables affecting forest diversity and functioning, and seasonally dry forest of the southern Amazon is among the ecosystems most affected by such pressures. Studying how fire will impact forests in this region is therefore important for understanding ecosystem functioning and for designing effective conservation action. We report the results of an experiment in which we manipulated fire, nutrient availability, and herbivory. We measured the effects of these interacting factors on the regenerative capacity of the ecotone between humid Amazon forest and Brazilian savanna. Regeneration density, diversity, and community composition were severely altered by fire. Additions of P and N + P reduced losses of density and richness in the first year post-fire. Herbivory was most important just after germination. Diversity was positively correlated with herbivory in unburned forest, likely because fire reduced the number of reproductive individuals. This contrasts with earlier results from the same study system in which herbivory was related to increased diversity after fire. We documented a significant effect of fire frequency; diversity in triennially burned forest was more similar to that in unburned than in annually burned forest, and the community composition of triennially burned forest was intermediate between unburned and annually burned areas. Preventing frequent fires will therefore help reduce losses in diversity in the southern Amazon's matrix of human-altered landscapes.

Lineage II of Southeast Asian/American DENV-2 Is Associated with a Severe Dengue Outbreak in the Peruvian Amazon

PubMed Central

Williams, Maya; Mayer, Sandra V.; Johnson, William L.; Chen, Rubing; Volkova, Evgeniya; Vilcarromero, Stalin; Widen, Steven G.; Wood, Thomas G.; Suarez-Ognio, Luis; Long, Kanya C.; Hanley, Kathryn A.; Morrison, Amy C.; Vasilakis, Nikos; Halsey, Eric S.

2014-01-01

During 2010 and 2011, the Loreto region of Peru experienced a dengue outbreak of unprecedented magnitude and severity for the region. This outbreak coincided with the reappearance of dengue virus-2 (DENV-2) in Loreto after almost 8 years. Whole-genome sequence indicated that DENV-2 from the outbreak belonged to lineage II of the southeast Asian/American genotype and was most closely related to viruses circulating in Brazil during 2007 and 2008, whereas DENV-2 previously circulating in Loreto grouped with lineage I (DENV-2 strains circulating in South America since 1990). One amino acid substitution (NS5 A811V) in the 2010 and 2011 isolates resulted from positive selection. However, the 2010 and 2011 DENV-2 did not replicate to higher titers in monocyte-derived dendritic cells and did not infect or disseminate in a higher proportion of Aedes aegypti than DENV-2 isolates previously circulating in Loreto. These results suggest that factors other than enhanced viral replication played a role in the severity of this outbreak. PMID:25002298

Glacier loss and hydro-social risks in the Peruvian Andes

NASA Astrophysics Data System (ADS)

Mark, Bryan G.; French, Adam; Baraer, Michel; Carey, Mark; Bury, Jeffrey; Young, Kenneth R.; Polk, Molly H.; Wigmore, Oliver; Lagos, Pablo; Crumley, Ryan; McKenzie, Jeffrey M.; Lautz, Laura

2017-12-01

Accelerating glacier recession in tropical highlands and in the Peruvian Andes specifically is a manifestation of global climate change that is influencing the hydrologic cycle and impacting water resources across a range of socio-environmental systems. Despite predictions regarding the negative effects of long-term glacier decline on water availability, many uncertainties remain regarding the timing and variability of hydrologic changes and their impacts. To improve context-specific understandings of the effects of climate change and glacial melt on water resources in the tropical Andes, this article synthesizes results from long-term transdisciplinary research with new findings from two glacierized Peruvian watersheds to develop and apply a multi-level conceptual framework focused on the coupled biophysical and social determinants of water access and hydro-social risks in these settings. The framework identifies several interacting variables-hydrologic transformation, land cover change, perceptions of water availability, water use and infrastructure in local and regional economies, and water rights and governance-to broadly assess how glacier change is embedded with social risks and vulnerability across diverse water uses and sectors. The primary focus is on the Santa River watershed draining the Cordillera Blanca to the Pacific. Additional analysis of hydrologic change and water access in the geographically distinct Shullcas River watershed draining the Huaytapallana massif towards the city of Huancayo further illuminates the heterogeneous character of hydrologic risk and vulnerability in the Andes.

Vulnerability of Hidropower Generation in Amazon's Tributaries Under Global Change Scenarios

NASA Astrophysics Data System (ADS)

Von Randow, R.; Siqueira, J. L., Jr.; Rodriguez, D. A.; Tomasella, J.; Floriano, L. E.

2014-12-01

The Brazilian energy sector is under continued expansion. The majority of energy power generation in the country is done through hydropower, which represents around 88% of the energy originated from renewable sources in the country. Still, only 10% of the high potential for production of the Amazon basin is currently availed, and this raises attention for the implantation of new hydropower plants in the region. When a hydropower plant is considered to be built, the natural characteristics of the region are taken into account, considering that the rainfall regime follows certain stationarity. However, under the possibility of global change, the expected capacity of the plants may be compromised. The objective of this study is to evaluate if the current hydropower plants of some Amazon River tributaries can maintain their functionality under global environmental change conditions. For that, based on the discharge data and hydropower information available by Brazilian National Agency of Water and Energy we will infer the energy potential of these hydropower dams for the historic period that will be compared with the energy potential for future discharge under global environmental change conditions. The future discharge will be generated by the Distributed Hydrological Model developed at the Brazilian National Institute for Space Research (MHD-INPE), driven by different climate change scenarios projected by regional and global atmospheric models, associated with land use scenarios projected by a dynamic land use model (LUCC-ME/INPE). MHD-INPE will be calibrated through observed discharges for 1970-1990 using current land use conditions, and will generate discharges for the period of 2000 to 2050. In addition, special attention will be given to the presence of secondary forest growth in the land use scenarios in order to identify the importance of considering this use in the modelling exercise, since that use is not usually considered in hydrological modelling studies.

Automatic Calibration of Global Flow Routing Model Parameters in the Amazon Basin Using Virtual SWOT Data

NASA Astrophysics Data System (ADS)

Mouffe, Melodie; Getirana, Augusto; Ricci, Sophie; Lion, Christine; Biancamaria, Sylvian; Boone, Aaron; Mognard, Nelly; Rogel, Philippe

2013-09-01

The Surface Water and Ocean Topography (SWOT) wide swath altimetry mission will provide measurements of water surface elevations (WSE) at a global scale. The aim of this study is to investigate the potential of these satellite data for the calibration of the hydrological model HyMAP, over the Amazon river basin. Since SWOT has not yet been launched, synthetical observations are used to calibrate the river bed depth and width, the Manning coefficient and the baseflow concentration time. The calibration process stands in the minimization of a cost function using an evolutionnary, global and multi-objective algorithm that describes the difference between the simulated and the observed WSE. We found that the calibration procedure is able to retrieve an optimal set of parameters such that it brings the simulated WSE closer to the observation. Still with a global calibration procedure where a uniform correction is applied, the improvement is limited to a mean correction over the catchment and the simulation period. We conclude that in order to benefit from the high resolution and complete coverage of the SWOT mission, the calibration process should be achieved sequentially in time over sub-domains as observations become available.

Determinants of first trimester attendance at antenatal care clinics in the Amazon region of Peru: A case-control study

PubMed Central

Moore, Nora; Blouin, Brittany; Razuri, Hugo; Casapia, Martin; Gyorkos, Theresa W.

2017-01-01

Objective To identify determinants which influence the timing of the first antenatal care (ANC) visit in pregnant women. Design Retrospective matched nested case-control study. Setting Two health centres, Belén and 6 de Octubre, in the Peruvian Amazon. Population All pregnant women who had attended ANC during the years 2010, 2011, and 2012. Methods All cases (819 women initiating ANC in their first trimester) were selected from ANC registries from 2010 to 2012. A random sample of controls (819 women initiating ANC in their second or third trimester) was matched 1:1 to cases on health centre and date of first ANC visit. Data were obtained from ANC registries. Conditional logistic regression analyses were performed. Main outcome measure Case-control status of each woman determined by the gestational age at first ANC visit. Results Cases had higher odds of: 1) being married or cohabiting (aOR = 1.69; 95% CI: 1.19, 2.41); 2) completing secondary school or attending post-secondary school (aOR = 1.45; 95% CI: 1.02, 2.06); 3) living in an urban environment (aOR = 1.79; 95% CI: 1.04, 3.10) and 4) having had a previous miscarriage (aOR = 1.56; 95% CI: 1.13, 2.15), compared to controls. No statistically significant difference in odds was found for parity (aOR = 1.08; 95% CI: 0.85, 1.36). Conclusions This study provides empirical evidence of determinants of first ANC attendance. These findings are crucial to the planning and timing of local interventions, like deworming, aimed at pregnant women so that they can access and benefit fully from all government-provided ANC services. PMID:28207749

MtDNA and Y-chromosomal diversity in the Chachapoya, a population from the northeast Peruvian Andes-Amazon divide.

PubMed

Guevara, Evelyn K; Palo, Jukka U; Guillén, Sonia; Sajantila, Antti

2016-11-01

The ancient Chachapoya were an aggregate of several ethnic groups that shared a common language, religion, and material culture. They inhabited a territory at the juncture of the Andes and the Amazon basin. Their position between those ecozones most likely influenced their genetic composition. We attempted to better understand their population history by assessing the contemporary genetic diversity in the Chachapoya and three of their immediate neighbors (Huancas, Jivaro, and Cajamarca). We inferred signatures of demographic history and genetic affinities, and contrasted the findings with data from other populations on local and continental scales. We studied mitochondrial DNA (mtDNA; hypervariable segment [HVSI and HVSII]) and Y chromosome (23 short tandem repeats (STRs)) marker data in 382 modern individuals. We used Sanger sequencing for mtDNA and a commercially available kit for Y-chromosomal STR typing. The Chachapoya had affinities with various populations of Andean and Amazonian origin. When examining the Native American component, the Chachapoya displayed high levels of genetic diversity. Together with other parameters, for example, large Tajima's D and Fu's Fs, the data indicated no drastic reduction of the population size in the past. The high level of diversity in the Chachapoya, the lack of evidence of drift in the past, and genetic affinities with a broad range of populations in the Americas reflects an intricate population history in the region. The new genetic data from the Chachapoya indeed seems to point to a genetic complexity that is not yet resolved but beginning to be elucidated. Am. J. Hum. Biol. 28:857-867, 2016. © 2016Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Determinants of first trimester attendance at antenatal care clinics in the Amazon region of Peru: A case-control study.

PubMed

Moore, Nora; Blouin, Brittany; Razuri, Hugo; Casapia, Martin; Gyorkos, Theresa W

2017-01-01

To identify determinants which influence the timing of the first antenatal care (ANC) visit in pregnant women. Retrospective matched nested case-control study. Two health centres, Belén and 6 de Octubre, in the Peruvian Amazon. All pregnant women who had attended ANC during the years 2010, 2011, and 2012. All cases (819 women initiating ANC in their first trimester) were selected from ANC registries from 2010 to 2012. A random sample of controls (819 women initiating ANC in their second or third trimester) was matched 1:1 to cases on health centre and date of first ANC visit. Data were obtained from ANC registries. Conditional logistic regression analyses were performed. Case-control status of each woman determined by the gestational age at first ANC visit. Cases had higher odds of: 1) being married or cohabiting (aOR = 1.69; 95% CI: 1.19, 2.41); 2) completing secondary school or attending post-secondary school (aOR = 1.45; 95% CI: 1.02, 2.06); 3) living in an urban environment (aOR = 1.79; 95% CI: 1.04, 3.10) and 4) having had a previous miscarriage (aOR = 1.56; 95% CI: 1.13, 2.15), compared to controls. No statistically significant difference in odds was found for parity (aOR = 1.08; 95% CI: 0.85, 1.36). This study provides empirical evidence of determinants of first ANC attendance. These findings are crucial to the planning and timing of local interventions, like deworming, aimed at pregnant women so that they can access and benefit fully from all government-provided ANC services.

Adaptation and evaluation of the bottle assay for monitoring insecticide resistance in disease vector mosquitoes in the Peruvian Amazon

PubMed Central

Zamora Perea, Elvira; Balta León, Rosario; Palomino Salcedo, Miriam; Brogdon, William G; Devine, Gregor J

2009-01-01

Background The purpose of this study was to establish whether the "bottle assay", a tool for monitoring insecticide resistance in mosquitoes, can complement and augment the capabilities of the established WHO assay, particularly in resource-poor, logistically challenging environments. Methods Laboratory reared Aedes aegypti and field collected Anopheles darlingi and Anopheles albimanus were used to assess the suitability of locally sourced solvents and formulated insecticides for use with the bottle assay. Using these adapted protocols, the ability of the bottle assay and the WHO assay to discriminate between deltamethrin-resistant Anopheles albimanus populations was compared. The diagnostic dose of deltamethrin that would identify resistance in currently susceptible populations of An. darlingi and Ae. aegypti was defined. The robustness of the bottle assay during a surveillance exercise in the Amazon was assessed. Results The bottle assay (using technical or formulated material) and the WHO assay were equally able to differentiate deltamethrin-resistant and susceptible An. albimanus populations. A diagnostic dose of 10 μg a.i./bottle was identified as the most sensitive discriminating dose for characterizing resistance in An. darlingi and Ae. aegypti. Treated bottles, prepared using locally sourced solvents and insecticide formulations, can be stored for > 14 days and used three times. Bottles can be stored and transported under local conditions and field-assays can be completed in a single evening. Conclusion The flexible and portable nature of the bottle assay and the ready availability of its components make it a potentially robust and useful tool for monitoring insecticide resistance and efficacy in remote areas that require minimal cost tools. PMID:19728871

Predicting the response of the Amazon rainforest to persistent drought conditions under current and future climates: a major challenge for global land surface models

NASA Astrophysics Data System (ADS)

Joetzjer, E.; Delire, C.; Douville, H.; Ciais, P.; Decharme, B.; Fisher, R.; Christoffersen, B.; Calvet, J. C.; da Costa, A. C. L.; Ferreira, L. V.; Meir, P.

2014-08-01

While a majority of Global Climate Models project dryer and longer dry seasons over the Amazon under higher CO2 levels, large uncertainties surround the response of vegetation to persistent droughts in both present-day and future climates. We propose a detailed evaluation of the ability of the ISBACC Land Surface Model to capture drought effects on both water and carbon budgets, comparing fluxes and stocks at two recent ThroughFall Exclusion (TFE) experiments performed in the Amazon. We also explore the model sensitivity to different Water Stress Function (WSF) and to an idealized increase in CO2 concentration and/or temperature. In spite of a reasonable soil moisture simulation, ISBACC struggles to correctly simulate the vegetation response to TFE whose amplitude and timing is highly sensitive to the WSF. Under higher CO2 concentration, the increased Water Use Efficiency (WUE) mitigates the ISBACC's sensitivity to drought. While one of the proposed WSF formulation improves the response of most ISBACC fluxes, except respiration, a parameterization of drought-induced tree mortality is missing for an accurate estimate of the vegetation response. Also, a better mechanistic understanding of the forest responses to drought under a warmer climate and higher CO2 concentration is clearly needed.

Regional aerosol chemistry of the Amazon Basin during the dry season

NASA Technical Reports Server (NTRS)

Talbot, R. W.; Harriss, R. C.; Andreae, M. O.; Andreae, T. W.

1988-01-01

The distribution and chemical composition of the atmospheric aerosol over the Amazon Basin forest were determined during the 1985 July-August dry season, using data on the aerosol chemical constituent concentration collected during the NASA Global Tropospheric Experiment Amazon Boundary Layer Experiment 2A mission. The results of the analyses suggest that there is a remarkable compositional and spatial homogeneity of the atmospheric aerosol on an extensive regional scale. Particulate organic carbon is the dominant component of the atmospheric aerosol, exhibiting an average concentration of about 740 nmol/cu m in the mixed layer and about 220 nmol/cu m in free tropospheric air. Oxalate and SO4(2-) exhibited the greatest enrichment in the mixed layer, while Cl(-) showed essentially no enrichment. The aerosol in the Amazonian atmosphere is essentially acid-base neutral, primarily as a result of incorporation of NH(+), which is presumably derived from NH3 released by the forest ecosystem.

Land Use and Land Cover Change in Forest Frontiers: The Role of Household Life Cycles

NASA Technical Reports Server (NTRS)

Walker, Robert

2002-01-01

Tropical deforestation remains a critical issue given its present rate and a widespread consensus regarding its implications for the global carbon cycle and biodiversity. Nowhere is the problem more pronounced than in the Amazon basin, home to the world's largest intact, tropical forest. This article addresses land cover change processes at household level in the Amazon basin, and to this end adapts a concept of domestic life cycle to the current institutional environment of tropical frontiers. In particular, it poses a risk minimization model that integrates demography with market-based factors such as transportation costs and accessibility. In essence, the article merges the theory of Chayanov with the household economy framework, in which markets exist for inputs (including labor), outputs, and capital. The risk model is specified and estimated, using survey data for 261 small producers along the Transamazon Highway in the eastern sector of the Brazilian Amazon.

Methane emissions to the troposphere from the Amazon floodplain

NASA Technical Reports Server (NTRS)

Devol, Allen H.; Richey, Jeffrey E.; Clark, Wayne A.; King, Stagg L.; Martinelli, Luiz A.

1988-01-01

The magnitudes of CH4 emissions to the troposphere from the Amazon River floodplain and the mechanism of these emissions were investigated using the data of 94 individual flux measurements made along a 1700-km stretch of the river during July/August 1985. The overall average rate of CH4 emission from wetlands was found to be 390 mg CH4/sq m per day, with the highest emissions (590 mg CH4/sq m per day) attributed to the water surfaces covered by aquatic macrophytes. Ebullition was the dominant mechanism of emission, accounting for 85 percent of the total. Surface-water CH4 concentrations were highly supersaturated, averaging 6.4 micromolar. The annual emission of CH4 from the Amazon Basin to the troposphere, estimated from the area and the known emission rate, is about 10 CH4 Tg/yr, indicating the importance of the area in the global atmospheric CH4 cycle.

Drought sensitivity of the Amazon rainforest.

PubMed

Phillips, Oliver L; Aragão, Luiz E O C; Lewis, Simon L; Fisher, Joshua B; Lloyd, Jon; López-González, Gabriela; Malhi, Yadvinder; Monteagudo, Abel; Peacock, Julie; Quesada, Carlos A; van der Heijden, Geertje; Almeida, Samuel; Amaral, Iêda; Arroyo, Luzmila; Aymard, Gerardo; Baker, Tim R; Bánki, Olaf; Blanc, Lilian; Bonal, Damien; Brando, Paulo; Chave, Jerome; de Oliveira, Atila Cristina Alves; Cardozo, Nallaret Dávila; Czimczik, Claudia I; Feldpausch, Ted R; Freitas, Maria Aparecida; Gloor, Emanuel; Higuchi, Niro; Jiménez, Eliana; Lloyd, Gareth; Meir, Patrick; Mendoza, Casimiro; Morel, Alexandra; Neill, David A; Nepstad, Daniel; Patiño, Sandra; Peñuela, Maria Cristina; Prieto, Adriana; Ramírez, Fredy; Schwarz, Michael; Silva, Javier; Silveira, Marcos; Thomas, Anne Sota; Steege, Hans Ter; Stropp, Juliana; Vásquez, Rodolfo; Zelazowski, Przemyslaw; Alvarez Dávila, Esteban; Andelman, Sandy; Andrade, Ana; Chao, Kuo-Jung; Erwin, Terry; Di Fiore, Anthony; Honorio C, Eurídice; Keeling, Helen; Killeen, Tim J; Laurance, William F; Peña Cruz, Antonio; Pitman, Nigel C A; Núñez Vargas, Percy; Ramírez-Angulo, Hirma; Rudas, Agustín; Salamão, Rafael; Silva, Natalino; Terborgh, John; Torres-Lezama, Armando

2009-03-06

Amazon forests are a key but poorly understood component of the global carbon cycle. If, as anticipated, they dry this century, they might accelerate climate change through carbon losses and changed surface energy balances. We used records from multiple long-term monitoring plots across Amazonia to assess forest responses to the intense 2005 drought, a possible analog of future events. Affected forest lost biomass, reversing a large long-term carbon sink, with the greatest impacts observed where the dry season was unusually intense. Relative to pre-2005 conditions, forest subjected to a 100-millimeter increase in water deficit lost 5.3 megagrams of aboveground biomass of carbon per hectare. The drought had a total biomass carbon impact of 1.2 to 1.6 petagrams (1.2 x 10(15) to 1.6 x 10(15) grams). Amazon forests therefore appear vulnerable to increasing moisture stress, with the potential for large carbon losses to exert feedback on climate change.

Remote tropical and sub-tropical responses to Amazon deforestation

NASA Astrophysics Data System (ADS)

Badger, Andrew M.; Dirmeyer, Paul A.

2016-05-01

Replacing natural vegetation with realistic tropical crops over the Amazon region in a global Earth system model impacts vertical transport of heat and moisture, modifying the interaction between the atmospheric boundary layer and the free atmosphere. Vertical velocity is decreased over a majority of the Amazon region, shifting the ascending branch and modifying the seasonality of the Hadley circulation over the Atlantic and eastern Pacific oceans. Using a simple model that relates circulation changes to heating anomalies and generalizing the upper-atmosphere temperature response to deforestation, agreement is found between the response in the fully-coupled model and the simple solution. These changes to the large-scale dynamics significantly impact precipitation in several remote regions, namely sub-Saharan Africa, Mexico, the southwestern United States and extratropical South America, suggesting non-local climate repercussions for large-scale land use changes in the tropics are possible.

Trace gas and aerosol transports into and out of the Amazon Basin

NASA Technical Reports Server (NTRS)

Garstang, Michael; Greco, Steven

1991-01-01

Overviews of the wet season Amazon Boundary Layer Experiment (ABLE IIB) are presented which give the context of the wet season experiment and some of the results. Copies of all reprints and manuscripts published or accepted for publication are attached. A complete list of all papers published in the reviewed literature, papers presented as well as published as part of conference preceedings, and articles published in the news media are listed in the appendices. Two scales of interaction of the rain forest were pursued in this work: (1) global interactions; and (2) local and regional interactions. Under the first scale, the role of the rain forest in the global system was the central thrust of the work. Under the second scale, the role of the rain forest on the basin and smaller scales was emphasized. The appendices also provide a summary of future work and a listing of degrees awarded during this report period.

Late Quaternary paleohydrology deduced from new marine sediment cores taken on the proximal Amazon continental margin

NASA Astrophysics Data System (ADS)

Nace, T.; Baker, P. A.; Dwyer, G. S.; Hollander, D. J.; Silva, C. G.

2010-12-01

Throughout the late Quaternary the Amazon Basin has been influenced by abrupt North-South climate forcing and has undergone several large climate variations as recorded in previously reported speleothem records. Despite its importance in the global carbon cycle there are few continuous, high-resolution records of the Amazon Basin that date back to and beyond the last glacial period. In this study, we report the first results of a marine geological expedition to the Amazon continental shelf and fan region. During this expedition we collected eight ~30 meter piston cores along with gravity, box and multicores. At both sites we undertook complementary multibeam and high resolution seismic reflection profiling. Analyses will be presented from two sets of box/gravity/piston cores. One core (32m) is from a high sedimentation site on the northern flank of the main submarine canyon within the Amazon Fan complex at 1700m water depth. The other core (30m) is located on a seamount to the south of the Amazon Fan complex at 3100m water depth. A mixed assemblage of foraminifera is used for 14C dating to obtain an age model and bulk organic geochemistry is analyzed to determine percent organic carbon, C/N ratios, δ13C and δ15N. The cores were continuously measured shipboard for magnetic susceptibility and gamma density using a GEOTEK logger. These findings uncover the contribution of pelagic and terrestrial organic matter, whether the terrigenous carbon is derived from C3 versus C4 vegetation, and whether the marine organic matter is composed of phytoplankton or marine algae.

Progress in Remote Sensing of Photosynthetic Activity over the Amazon Basin

NASA Technical Reports Server (NTRS)

Resende de Sousa, Celio Helder; Hilker, Thomas; Waring, Richard; Mendes De Moura, Yhasmin; Lyapustin, Alexei

2017-01-01

Although quantifying the massive exchange of carbon that takes place over the Amazon Basin remains a challenge, progress is being made as the remote sensing community moves from using traditional, reflectance-based vegetation indices, such as the Normalized Difference Vegetation Index (NDVI), to the more functional Photochemical Reflectance Index (PRI). This new index, together with satellite-derived estimates of canopy light interception and Sun-Induced Fluorescence (SIF), provide improved estimates of Gross Primary Production (GPP). This paper traces the development of these new approaches, compares the results of their analyses from multiple years of data acquired across the Amazon Basin and suggests further improvements in instrument design, data acquisition and processing. We demonstrated that our estimates of PRI are in generally good agreement with eddy-flux tower measurements of photosynthetic light use efficiency (epsilon) at four sites in the Amazon Basin: r(exp 2) values ranged from 0.37 to 0.51 for northern flux sites and to 0.78for southern flux sites. This is a significant advance over previous approaches seeking to establish a link between global-scale photosynthetic activity and remotely-sensed data. When combined with measurements of Sun-Induced Fluorescence (SIF), PRI provides realistic estimates of seasonal variation in photosynthesis over the Amazon that relate well to the wet and dry seasons. We anticipate that our findings will steer the development of improved approaches to estimate photosynthetic activity over the tropics.

Progress in Remote Sensing of Photosynthetic Activity over the Amazon Basin

PubMed Central

de Sousa, Celio Helder Resende; Hilker, Thomas; Waring, Richard; de Moura, Yhasmin Mendes; Lyapustin, Alexei

2017-01-01

Although quantifying the massive exchange of carbon that takes place over the Amazon Basin remains a challenge, progress is being made as the remote sensing community moves from using traditional, reflectance-based vegetation indices, such as the Normalized Difference Vegetation Index (NDVI), to the more functional Photochemical Reflectance Index (PRI). This new index, together with satellite-derived estimates of canopy light interception and Sun-Induced Fluorescence (SIF), provide improved estimates of Gross Primary Production (GPP). This paper traces the development of these new approaches, compares the results of their analyses from multiple years of data acquired across the Amazon Basin and suggests further improvements in instrument design, data acquisition and processing. We demonstrated that our estimates of PRI are in generally good agreement with eddy-flux tower measurements of photosynthetic light use efficiency (ε) at four sites in the Amazon Basin: r2 values ranged from 0.37 to 0.51 for northern flux sites and to 0.78 for southern flux sites. This is a significant advance over previous approaches seeking to establish a link between global-scale photosynthetic activity and remotely-sensed data. When combined with measurements of Sun-Induced Fluorescence (SIF), PRI provides realistic estimates of seasonal variation in photosynthesis over the Amazon that relate well to the wet and dry seasons. We anticipate that our findings will steer the development of improved approaches to estimate photosynthetic activity over the tropics. PMID:29375895

Progress in Remote Sensing of Photosynthetic Activity over the Amazon Basin.

PubMed

de Sousa, Celio Helder Resende; Hilker, Thomas; Waring, Richard; de Moura, Yhasmin Mendes; Lyapustin, Alexei

2017-01-01

Although quantifying the massive exchange of carbon that takes place over the Amazon Basin remains a challenge, progress is being made as the remote sensing community moves from using traditional, reflectance-based vegetation indices, such as the Normalized Difference Vegetation Index (NDVI), to the more functional Photochemical Reflectance Index (PRI). This new index, together with satellite-derived estimates of canopy light interception and Sun-Induced Fluorescence (SIF), provide improved estimates of Gross Primary Production (GPP). This paper traces the development of these new approaches, compares the results of their analyses from multiple years of data acquired across the Amazon Basin and suggests further improvements in instrument design, data acquisition and processing. We demonstrated that our estimates of PRI are in generally good agreement with eddy-flux tower measurements of photosynthetic light use efficiency (ε) at four sites in the Amazon Basin: r 2 values ranged from 0.37 to 0.51 for northern flux sites and to 0.78 for southern flux sites. This is a significant advance over previous approaches seeking to establish a link between global-scale photosynthetic activity and remotely-sensed data. When combined with measurements of Sun-Induced Fluorescence (SIF), PRI provides realistic estimates of seasonal variation in photosynthesis over the Amazon that relate well to the wet and dry seasons. We anticipate that our findings will steer the development of improved approaches to estimate photosynthetic activity over the tropics.

Net Primary Production of Terrestrial Ecosystems from 2000 to 2009

NASA Technical Reports Server (NTRS)

Potter, Christopher; Klooster, Steven; Genovese, Vanessa

2012-01-01

The CASA (Carnegie-Ames-Stanford) ecosystem model has been used to estimate monthly carbon fluxes in terrestrial ecosystems from 2000 to 2009, with global data inputs from NASA's Terra Moderate Resolution Imaging Spectroradiometer (MODIS) vegetation cover mapping. Net primary production (NPP) flux for atmospheric carbon dioxide has varied slightly from year-to-year, but was predicted to have increased over short multi-year periods in the regions of the high-latitude Northern Hemisphere, South Asia, Central Africa, and the western Amazon since the year 2000. These CASA results for global NPP were found to be in contrast to other recently published modeling trends for terrestrial NPP with high sensitivity to regional drying patterns. Nonetheless, periodic declines in regional NPP were predicted by CASA for the southern and western Untied States, the southern Amazon, and southern and eastern Africa. NPP in tropical forest zones was examined in greater detail to discover lower annual production values than previously reported in many global models across the tropical rainforest zones, likely due to the enhanced detection of lower production ecosystems replacing primary rainforest.

Seasonality and interannual variability of CH4 fluxes from the eastern Amazon Basin inferred from atmospheric mole fraction profiles

PubMed Central

Gatti, Luciana V.; Gloor, Manuel; Miller, John B.; Domingues, Lucas G.; Correia, Caio S. C.; Borges, Viviane F.

2016-01-01

Abstract The Amazon Basin is an important region for global CH4 emissions. It hosts the largest area of humid tropical forests, and around 20% of this area is seasonally flooded. In a warming climate it is possible that CH4 emissions from the Amazon will increase both as a result of increased temperatures and precipitation. To examine if there are indications of first signs of such changes we present here a 13 year (2000–2013) record of regularly measured vertical CH4 mole fraction profiles above the eastern Brazilian Amazon, sensitive to fluxes from the region upwind of Santarém (SAN), between SAN and the Atlantic coast. Using a simple mass balance approach, we find substantial CH4 emissions with an annual average flux of 52.8 ± 6.8 mg CH4 m−2 d−1 over an area of approximately 1 × 106 km2. Fluxes are highest in two periods of the year: in the beginning of the wet season and during the dry season. Using a CO:CH4 emission factor estimated from the profile data, we estimated a contribution of biomass burning of around 15% to the total flux in the dry season, indicating that biogenic emissions dominate the CH4 flux. This 13 year record shows that CH4 emissions upwind of SAN varied over the years, with highest emissions in 2008 (around 25% higher than in 2007), mainly during the wet season, representing 19% of the observed global increase in this year. PMID:27642546

Using LandSat and SRTM datasets to develop relationships for estimating bankfull channel widths in the Amazon Basin

NASA Astrophysics Data System (ADS)

Gummadi, V.; He, Y.; Beighley, E. R.

2007-12-01

Modeling fine scale spatial and temporal processes of the hydrologic cycle over continental to global extents is vital for assessing the potential impacts of climate and land use change on global water resources and related systems. Significant advancement in understanding and predicting the magnitude, trend, timing and partitioning of terrestrial water stores and fluxes requires the development of methodologies and knowledge for extracting representative hydraulic geometries from remote sensing data products and field data, suitable for estimating inundation characteristics and water storage changes which are limited for much of the globe. In this research, relationships between channel and floodplain widths and spatial drainage characteristics are developed for the Amazon Basin. Channel and floodplain widths were measured using SRTM data and LandSat TM/ETM imagery at 510 sites. The study sites were selected based on the Pfafstetter decomposition methodology which provides an irregular model grid based on repeatedly subdividing landscape units into nine subunits consisting of basins and interbasins. The selected sites encompass all possible combinations of Pfafstetter modeling units (ex., basins of interbasins, interbasins of basins, etc.). The 510 study sites are within the Amazon Basin with drainage areas ranging 10 to 5.4 million sq km and mean watershed ground slopes ranging from 0.4 and 30 percent. Preliminary results indicate that channel widths can be predicted using drainage area and mean watershed slope (R2 = 0.85). Floodplain widths can be predicted using channel width and the local slope (R2 = 0.70). Using the Purus watershed, a sub-basin to the Amazon (350,000 sq km), effects of channel and floodplain widths on simulated hydrographs are presented.

Global vegetation-fire pattern under different land use and climate conditions

NASA Astrophysics Data System (ADS)

Thonicke, K.; Poulter, B.; Heyder, U.; Gumpenberger, M.; Cramer, W.

2008-12-01

Fire is a process of global significance in the Earth System influencing vegetation dynamics, biogeochemical cycling and biophysical feedbacks. Naturally ignited wildfires have long history in the Earth System. Humans have been using fire to shape the landscape for their purposes for many millenia, sometimes influencing the status of the vegetation remarkably as for example in Mediterranean-type ecosystems. Processes and drivers describing fire danger, ignitions, fire spread and effects are relatively well-known for many fire-prone ecosystems. Modeling these has a long tradition in fire-affected regions to predict fire risk and behavior for fire-fighting purposes. On the other hand, the global vegetation community realized the importance of disturbances to be recognized in their global vegetation models with fire being globally most important and so-far best studied. First attempts to simulate fire globally considered a minimal set of drivers, whereas recent developments attempt to consider each fire process separately. The process-based fire model SPITFIRE (SPread and InTensity of FIRE) simulates these processes embedded in the LPJ DGVM. Uncertainties still arise from missing measurements for some parameters in less-studied fire regimes, or from broad PFT classifications which subsume different fire-ecological adaptations and tolerances. Some earth observation data sets as well as fire emission models help to evaluate seasonality and spatial distribution of simulated fire ignitions, area burnt and fire emissions within SPITFIRE. Deforestation fires are a major source of carbon released to the atmosphere in the tropics; in the Amazon basin it is the second-largest contributor to Brazils GHG emissions. How ongoing deforestation affects fire regimes, forest stability and biogeochemical cycling in the Amazon basin under present climate conditions will be presented. Relative importance of fire vs. climate and land use change is analyzed. Emissions resulting from wildfires, agricultural and woodfuel burning will be quantified and drivers identified. Future projections of climate and land use change are applied to the model to investigate joint effects on future changes in fire, deforestation and vegetation dynamics in the Amazon basin.

Barriers and facilitators to antiretroviral therapy adherence among Peruvian adolescents living with HIV: A qualitative study

PubMed Central

Wong, Milagros; Muñoz, Maribel; Valle, Emiliano; Leon, Segundo R.; Díaz Perez, Dayana; Kolevic, Lenka; Franke, Molly

2018-01-01

AIDS deaths among adolescents are increasing globally. This qualitative study investigated the barriers and facilitators to cART adherence among Peruvian adolescents living with HIV. Guided by a social ecological model, we analyzed transcripts from 24 psychosocial support groups for HIV-positive adolescents aged 13–17 years and 15 individual, in-depth interviews with cART providers and caregivers to identify the barriers and facilitators to cART adherence at the individual, family/caregiver and hospital levels. Most barriers and facilitators to cART adherence clustered at the individual and family/caregiver levels, centering on support provided to adolescents; history of declining health due to suboptimal cART adherence; side effects from antiretroviral drugs; and cART misinformation. Interventions to support adolescent HIV cART adherence should begin at the individual and family/caregiver levels and include an educational component. No adolescent living with HIV should die from AIDS in an era of accessible cART. PMID:29447226

[Neglected infectious diseases: an ongoing challenge for public health and equity in Peru].

PubMed

Cabezas-Sánchez, César

2014-04-01

Neglected Infectious Diseases (NID) affect more than one billion people worldwide, and are associated with poverty, geographic isolation of populations, social stigma, lack of precise data on estimates on both the global and local burden of disease (underreporting of the diseases), inadequate financial and political resources to effective control measures, lack of lobbying on behalf of the most vulnerable population, as well as scarce drug and diagnostic methods development. In this article we describe the relationship between NID, poverty and inequality, we propose a new concept of disease in the tropics, expanding the list of diseases that share characteristics with NID in the Peruvian context, discuss the limited availability of drugs and diagnostic tests to properly deal with these diseases, as well as highlight the contributions by the Peruvian National Institute of Health, and as final thoughts, we state that the solution for the prevention and control of NID must include an integrated approach, including the social determinants of health in the context of the fight against poverty and inequality.

Oil Extraction and Indigenous Livelihoods in the Northern Ecuadorian Amazon

PubMed Central

Bozigar, Matthew; Gray, Clark L.; Bilsborrow, Richard E.

2015-01-01

Globally, the extraction of minerals and fossil fuels is increasingly penetrating into isolated regions inhabited by indigenous peoples, potentially undermining their livelihoods and well-being. To provide new insight to this issue, we draw on a unique longitudinal dataset collected in the Ecuadorian Amazon over an 11-year period from 484 indigenous households with varying degrees of exposure to oil extraction. Fixed and random effects regression models of the consequences of oil activities for livelihood outcomes reveal mixed and multidimensional effects. These results challenge common assumptions about these processes and are only partly consistent with hypotheses drawn from the Dutch disease literature. PMID:26543302

Analysis of smoke and cloud impact on seasonal and interannual variations in normalized difference vegetation index in Amazon

NASA Astrophysics Data System (ADS)

Kobayashi, H.; Dye, D. G.

2004-12-01

Normalized difference vegetation index (NDVI) derived from National Oceanic and Atmospheric Administration (NOAA)/Advanced Very High Resolution Radiometer (AVHRR) is a unique measurement of long-term variations in global vegetation dynamics. The NDVI data have been used for the detection of the seasonal and interannual variations in vegetation. However, as reported in several studies, NDVI decreases with the increase in clouds and/or smoke aerosol contaminated in the pixels. This study assesses the smoke and clouds effect on long-term Global Inventory Modeling and Mapping Studies (GIMMS) and Pathfinder AVHRR Land (PAL) NDVI data in Amazon. This knowledge will help developing the correction method in the tropics in the future. To assess the smoke and cloud effects on GIMMS and PAL, we used another satellite-derived data sets; NDVI derived from SPOT/VEGETATION (VGT) data and Aerosol Index (AI) derived from Total Ozone Mapping Spectrometer (TOMS). Since April 1998, VGT has measured the earth surface globally including in Amazon. The advantage of the VGT is that it has blue channel where the smoke and cloud can be easily detected. By analyzing the VGT NDVI and comparing with the AVHRR-based NDVI, we inferred smoke and cloud effect on the AVHRR-based NDVI. From the results of the VGT analysis, we found the large NDVI seasonality in South and Southeastern Amazon. In these areas, the NDVI gradually increased from April to July and decreased from August to October. However the sufficient NDVI data were not existed from August to November when the smoke and cloud pixels were masked using blue reflectance. Thus it is said that the smoke and clouds mainly cause the large decreases in NDVI between August and November and NDVI has little vegetation signature in these months. Also we examined the interannual variations in NDVI and smoke aerosol. Then the decrease in NDVI is well consistent with the increase in the increase in AI. Our results suggest that the months between April and July are the most reliable season to monitor the vegetation.

The spatial extent of change in tropical forest ecosystem services in the Amazon delta

NASA Astrophysics Data System (ADS)

de Araujo Barbosa, C. C.; Atkinson, P.; Dearing, J.

2014-12-01

Deltas hold major economic potential due their strategic location, close to seas and inland waterways, thereby supporting intense economic activity. The increasing pace of human development activities in coastal deltas over the past five decades has also strained environmental resources and produced extensive economic and sociocultural impacts. The Amazon delta is located in the Amazon Basin, North Brazil, the largest river basin on Earth and also one of the least understood. A considerable segment of the population living in the Amazon delta is directly dependent on the local extraction of natural resources for their livelihood. Areas sparsely inhabited may be exploited with few negative consequences for the environment. However, increasing pressure on ecosystem services is amplified by large fluxes of immigrants from other parts of the country, especially from the semi-arid zone in Northeast Brazil to the lowland forests of the Amazon delta. Here we present partial results from a bigger research project. Therefore, the focus will be on presenting an overview of the current state, and the extent of changes on forest related ecosystem services in the Amazon delta over the last three decades. We aggregated a multitude of datasets, from a variety of sources, for example, from satellite imagery such as the Advanced Very High Resolution Radiometer (AVHRR), the Global Inventory Modelling and Mapping Studies (GIMMS), the Moderate Resolution Imaging Spectroradiometer (MODIS), and climate datasets at meteorological station level from the Brazilian National Institute of Meteorology (INMET) and social and economic statistics data from the Brazilian Institute of Geography and Statistics (IBGE) and from the Brazilian Institute of Applied Economic Research (IPEA). Through analysis of socioeconomic and satellite earth observation data we were able to produce and present spatially-explicit information with the current state and transition in forest cover and its impacts to forest ecosystem services providing units in the Amazon delta.

Global Terrestrial Water Storage Changes and Connections to ENSO Events

NASA Astrophysics Data System (ADS)

Ni, Shengnan; Chen, Jianli; Wilson, Clark R.; Li, Jin; Hu, Xiaogong; Fu, Rong

2018-01-01

Improved data quality of extended record of the Gravity Recovery and Climate Experiment (GRACE) satellite gravity solutions enables better understanding of terrestrial water storage (TWS) variations. Connections of TWS and climate change are critical to investigate regional and global water cycles. In this study, we provide a comprehensive analysis of global connections between interannual TWS changes and El Niño Southern Oscillation (ENSO) events, using multiple sources of data, including GRACE measurements, land surface model (LSM) predictions and precipitation observations. We use cross-correlation and coherence spectrum analysis to examine global connections between interannual TWS changes and the Niño 3.4 index, and select four river basins (Amazon, Orinoco, Colorado, and Lena) for more detailed analysis. The results indicate that interannual TWS changes are strongly correlated with ENSO over much of the globe, with maximum cross-correlation coefficients up to 0.70, well above the 95% significance level ( 0.29) derived by the Monte Carlo experiments. The strongest correlations are found in tropical and subtropical regions, especially in the Amazon, Orinoco, and La Plata basins. While both GRACE and LSM TWS estimates show reasonably good correlations with ENSO and generally consistent spatial correlation patterns, notably higher correlations are found between GRACE TWS and ENSO. The existence of significant correlations in middle-high latitudes shows the large-scale impact of ENSO on the global water cycle.

Climatic and ecological future of the Amazon: likelihood and causes of change

NASA Astrophysics Data System (ADS)

Cook, B.; Zeng, N.; Yoon, J.-H.

2010-05-01

Some recent climate modeling results suggested a possible dieback of the Amazon rainforest under future climate change, a prediction that raised considerable interest as well as controversy. To determine the likelihood and causes of such changes, we analyzed the output of 15 models from the Intergovernmental Panel on Climate Change Fourth Assessment Report (IPCC/AR4) and a dynamic vegetation model VEGAS driven by these climate output. Our results suggest that the core of the Amazon rainforest should remain largely stable as rainfall is projected to increase in nearly all models. However, the periphery, notably the southern edge of the Amazon and further south in central Brazil, are in danger of drying out, driven by two main processes. Firstly, a decline in precipitation of 22% in the southern Amazon's dry season (May-September) reduces soil moisture, despite an increase in precipitation during the wet season, due to nonlinear responses in hydrology and ecosystem dynamics. Two dynamical mechanisms may explain the lower dry season rainfall: (1) a general subtropical drying under global warming when the dry season southern Amazon is under the control of the subtropical high pressure; (2) a stronger north-south tropical Atlantic sea surface temperature gradient, and to lesser degree a warmer eastern equatorial Pacific. Secondly, evaporation demand will increase due to the general warming, further reducing soil moisture. In terms of ecosystem response, higher maintenance cost and reduced productivity under warming may also have additional adverse impact. The drying corresponds to a lengthening of the dry season by 11 days. As a consequence, the median of the models projects a reduction of 20% in vegetation carbon stock in the southern Amazon, central Brazil, and parts of the Andean Mountains. Further, VEGAS predicts enhancement of fire risk by 10-15%. The increase in fire is primarily due to the reduction in soil moisture, and the decrease in dry season rainfall, which is when fire danger reaches its peak. Because the southern Amazon is also under intense human influence as a result of deforestation and land use, added pressure to the region's ecosystems from climate change may subject the region to profound changes in the 21st century.

Monitoring stress-related mass variations in Amazon trees using accelerometers

NASA Astrophysics Data System (ADS)

van Emmerik, T. H. M.; Steele-Dunne, S. C.; Gentine, P.; Hut, R.; Guerin, M. F.; Leus, G.; Oliveira, R. S.; Van De Giesen, N.

2016-12-01

Containing half of the world's rainforests, the Amazon plays a key role in the global water and carbon budget. However, the Amazon remains poorly understood, but appears to be vulnerable to increasing moisture stress, and future droughts have the potential to considerably change the global water and carbon budget. Field measurements will allow further investigations of the effects of moisture stress and droughts on tree dynamics, and its impact on the water and carbon budget. This study focuses on studying the diurnal mass variations of seven Amazonian tree species. The mass of trees is influenced by physiological processes within the tree (e.g. transpiration and root water uptake), as well as external loads (e.g. intercepted precipitation). Depending on the physiological traits of an individual tree, moisture stress and drought affect processes such as photosynthesis, assimilation, transpiration, and root water uptake. In turn, these have their influence on diurnal mass variations of a tree. Our study uses measured three-dimensional displacement and acceleration of trees, to detect and quantify their diurnal (bio)mass variations. Nineteen accelerometers and dendrometers were installed on seven different tree species in the Amazon rainforest, covering an area of 250 x 250 m. The selected species span a wide range in wood density (0.5 - 1.1), diameter (15 - 40 cm) and height (25 - 60 m). Acceleration was measured with a frequency of 10 Hz, from August 2015 to June 2016, covering both the wet and dry season. On-site additional measurements of net radiation, wind speed at three heights, temperature, and precipitation as available every 15 minutes. Dendrometers measured variation in xylem and bark thickness every 5 minutes. The MUltiple SIgnal Classification (MUSIC) algorithm was applied to the acceleration time series to estimate the frequency spectrum of each tree. A correction was necessary to account for the dominant effect of wind. The resulting spectra reveal clear diurnal variations, as well as changes during precipitation events. Comparison with ancillary data suggests that we can extract information on diurnal mass variations from the accelerometer data. This may provide valuable insight into the effects of water stress on mass variations in different Amazon tree species.

Predicting the response of the Amazon rainforest to persistent drought conditions under current and future climates: a major challenge for global land surface models

NASA Astrophysics Data System (ADS)

Joetzjer, E.; Delire, C.; Douville, H.; Ciais, P.; Decharme, B.; Fisher, R.; Christoffersen, B.; Calvet, J. C.; da Costa, A. C. L.; Ferreira, L. V.; Meir, P.

2014-12-01

While a majority of global climate models project drier and longer dry seasons over the Amazon under higher CO2 levels, large uncertainties surround the response of vegetation to persistent droughts in both present-day and future climates. We propose a detailed evaluation of the ability of the ISBACC (Interaction Soil-Biosphere-Atmosphere Carbon Cycle) land surface model to capture drought effects on both water and carbon budgets, comparing fluxes and stocks at two recent throughfall exclusion (TFE) experiments performed in the Amazon. We also explore the model sensitivity to different water stress functions (WSFs) and to an idealized increase in CO2 concentration and/or temperature. In spite of a reasonable soil moisture simulation, ISBACC struggles to correctly simulate the vegetation response to TFE whose amplitude and timing is highly sensitive to the WSF. Under higher CO2 concentrations, the increased water-use efficiency (WUE) mitigates the sensitivity of ISBACC to drought. While one of the proposed WSF formulations improves the response of most ISBACC fluxes, except respiration, a parameterization of drought-induced tree mortality is missing for an accurate estimate of the vegetation response. Also, a better mechanistic understanding of the forest responses to drought under a warmer climate and higher CO2 concentration is clearly needed.

Fire and Deforestation Dynamics in South America over the Past 50 Years

NASA Astrophysics Data System (ADS)

van Marle, M.; Field, R. D.; van der Werf, G.

2015-12-01

Fires play an important role in the Earth system and are one of the major sources of greenhouse gases and aerosols. Satellites have been key to understand their spatial and temporal variability in space and time, but the most frequently used satellite datasets start only in 1995. There are still large uncertainties about the frequency and intensity of fires in the pre-satellite time period, especially in regions with active deforestation, which may have changed dramatically in intensity in the past decades influencing fire dynamics. We used two datasets to extend the record of fires and deforestation in the Amazon region back in time: 1) annual forest loss rates starting in 1990 derived from Vegetation Optical Depth (VOD), which is a satellite-based vegetation product that can be used as proxy for forest loss, and 2) horizontal visibility as proxy for fire emissions, reported by weather stations and airports in the Amazon, which started around 1940, and having widespread coverage since 1973. We show that these datasets overlap with fire emission estimates from the Global Fire Emissions Database (GFED) enabling us to estimate fire emissions over the last 50 years. We will discuss how fires have varied over time in this region with globally significant emissions, how droughts have influenced fire activity and deforestation rates, and what the impact is of land-use change caused by fire on emissions in the Amazon region.

Oxidative mitigation of aquatic methane emissions in large Amazonian rivers.

PubMed

Sawakuchi, Henrique O; Bastviken, David; Sawakuchi, André O; Ward, Nicholas D; Borges, Clovis D; Tsai, Siu M; Richey, Jeffrey E; Ballester, Maria Victoria R; Krusche, Alex V

2016-03-01

The flux of methane (CH4 ) from inland waters to the atmosphere has a profound impact on global atmospheric greenhouse gas (GHG) levels, and yet, strikingly little is known about the dynamics controlling sources and sinks of CH4 in the aquatic setting. Here, we examine the cycling and flux of CH4 in six large rivers in the Amazon basin, including the Amazon River. Based on stable isotopic mass balances of CH4 , inputs and outputs to the water column were estimated. We determined that ecosystem methane oxidation (MOX) reduced the diffusive flux of CH4 by approximately 28-96% and varied depending on hydrologic regime and general geochemical characteristics of tributaries of the Amazon River. For example, the relative amount of MOX was maximal during high water in black and white water rivers and minimal in clear water rivers during low water. The abundance of genetic markers for methane-oxidizing bacteria (pmoA) was positively correlated with enhanced signals of oxidation, providing independent support for the detected MOX patterns. The results indicate that MOX in large Amazonian rivers can consume from 0.45 to 2.07 Tg CH4 yr(-1) , representing up to 7% of the estimated global soil sink. Nevertheless, climate change and changes in hydrology, for example, due to construction of dams, can alter this balance, influencing CH4 emissions to atmosphere. © 2015 John Wiley & Sons Ltd.

Vegetation dynamics and rainfall sensitivity of the Amazon.

PubMed

Hilker, Thomas; Lyapustin, Alexei I; Tucker, Compton J; Hall, Forrest G; Myneni, Ranga B; Wang, Yujie; Bi, Jian; Mendes de Moura, Yhasmin; Sellers, Piers J

2014-11-11

We show that the vegetation canopy of the Amazon rainforest is highly sensitive to changes in precipitation patterns and that reduction in rainfall since 2000 has diminished vegetation greenness across large parts of Amazonia. Large-scale directional declines in vegetation greenness may indicate decreases in carbon uptake and substantial changes in the energy balance of the Amazon. We use improved estimates of surface reflectance from satellite data to show a close link between reductions in annual precipitation, El Niño southern oscillation events, and photosynthetic activity across tropical and subtropical Amazonia. We report that, since the year 2000, precipitation has declined across 69% of the tropical evergreen forest (5.4 million km(2)) and across 80% of the subtropical grasslands (3.3 million km(2)). These reductions, which coincided with a decline in terrestrial water storage, account for about 55% of a satellite-observed widespread decline in the normalized difference vegetation index (NDVI). During El Niño events, NDVI was reduced about 16.6% across an area of up to 1.6 million km(2) compared with average conditions. Several global circulation models suggest that a rise in equatorial sea surface temperature and related displacement of the intertropical convergence zone could lead to considerable drying of tropical forests in the 21st century. Our results provide evidence that persistent drying could degrade Amazonian forest canopies, which would have cascading effects on global carbon and climate dynamics.

Vegetation Dynamics and Rainfall Sensitivity of the Amazon

NASA Technical Reports Server (NTRS)

Hilker, Thomas; Lyapustin, Alexei I.; Tucker, Compton J.; Hall, Forrest G.; Myneni, Ranga B.; Wang, Yujie; Bi, Jian; Mendes de Moura, Yhasmin; Sellers, Piers J.

2014-01-01

We show that the vegetation canopy of the Amazon rainforest is highly sensitive to changes in precipitation patterns and that reduction in rainfall since 2000 has diminished vegetation greenness across large parts of Amazonia. Large-scale directional declines in vegetation greenness may indicate decreases in carbon uptake and substantial changes in the energy balance of the Amazon. We use improved estimates of surface reflectance from satellite data to show a close link between reductions in annual precipitation, El Nino southern oscillation events, and photosynthetic activity across tropical and subtropical Amazonia. We report that, since the year 2000, precipitation has declined across 69% of the tropical evergreen forest (5.4 million sq km) and across 80% of the subtropical grasslands (3.3 million sq km). These reductions, which coincided with a decline in terrestrial water storage, account for about 55% of a satellite-observed widespread decline in the normalized difference vegetation index (NDVI). During El Nino events, NDVI was reduced about 16.6% across an area of up to 1.6 million sq km compared with average conditions. Several global circulation models suggest that a rise in equatorial sea surface temperature and related displacement of the intertropical convergence zone could lead to considerable drying of tropical forests in the 21st century. Our results provide evidence that persistent drying could degrade Amazonian forest canopies, which would have cascading effects on global carbon and climate dynamics.

Anthropometric differences in preschool children of Japanese ancestry in Lima, Peru.

PubMed

Shimabuku, Roberto; Teruya, Alberto; Nakachi, Graciela

2009-08-01

Ethnic differences in the pattern and trend of growth and weight have been described in studies of migrant populations. Our objective was to compare anthropometric parameters and overweight prevalence in third and fourth generation Japanese descendant preschoolers within the Peruvian preschool population. A total of 337 measurements of height and weight from 284 children, three to five years of age, were taken over three years in one Japanese-Peruvian preschool center in Lima, Peru. The data of each parameter were classified into three ethnic groups according to their parents' surnames: Japanese descendant children (n = 104), with both parents with Japanese surnames; Japanese-Peruvian descendant (n = 93), one parent with a Japanese surname and one with a non-Japanese surname; and Peruvian descendant (n = 140), both parents with non-Japanese surnames. We used the National Center for Health Statistics (NCHS) 2000 growth charts as reference values to obtain centiles, Z scores, and body mass index (BMI). In boys, the three groups differed significantly in height, weight, BMI, Z scores, and overweight prevalence. Peruvian descendant boys were taller and heavier than Japanese-Peruvian and Japanese descendants. Moreover, Japanese-Peruvian descendant boys were taller and heavier than Japanese descendant boys. In girls, there were no significant differences in height and weight and in overweight prevalence among the three ethnic groups. Japanese descendants in Peru have height, weight and BMI values similar to those of Japanese children in Japan but lesser than Peruvian children. These findings may be related to differences in ethnic background.

Distribution and identification of sand flies naturally infected with Leishmania from the Southeastern Peruvian Amazon.

PubMed

Zorrilla, Victor; De Los Santos, Maxy B; Espada, Liz; Santos, Rocío Del Pilar; Fernandez, Roberto; Urquia, Albino; Stoops, Craig A; Ballard, Sarah-Blythe; Lescano, Andres G; Vásquez, Gissella M; Valdivia, Hugo O

2017-11-01

Cutaneous leishmaniasis (CL) is an important health problem in the New World affecting civilian and military populations that are frequently exposed in endemic settings. The Peruvian region of Madre de Dios located near the border with Brazil is one of the most endemic CL regions in South America with more than 4,451 reported cases between 2010 and 2015 according to the Peruvian epidemiology directorate. However, little is known regarding the diversity and distribution of sand fly vectors in this region. In this study, we aimed to characterize the sand fly fauna in this endemic setting and identify sand fly species naturally infected with Leishmania possibly involved in pathogen transmission. Sand fly collections were carried out during 2014 and 2015 in the communities of Flor de Acre, Villa Primavera, Mavila and Arca Pacahuara using CDC light traps and Shannon traps. Collected specimens were identified and non-blood-fed females were selected for Leishmania infection screening using kinetoplastid DNA-PCR (kDNA-PCR) and nested Real time PCR for species identification. A total of 10,897 phlebotomines belonging to the genus Lutzomyia (58 species) and Brumptomyia (2 species) were collected. Our study confirmed the widespread distribution and abundance of Lutzomyia (Trichophoromyia) spp. (24%), Lu. whitmani (19.4%) and Lu. yucumensis (15.8%) in the region. Analysis of Shannon diversity index indicates variability in sand fly composition across sites with Villa Primavera presenting the highest sand fly diversity and abundance. Leishmania screening by kDNA-PCR resulted in 45 positive pools collected from Flor de Acre (34 pools), Mavila (10 pools) and Arca Pacahuara (1 pool) and included 14 species: Lu. yucumensis, Lu. aragoi, Lu. sallesi, Lu. sherlocki, Lu. shawi, Lu. walkeri, Lu nevesi, Lu. migonei, Lu. davisi, Lu. carrerai, Lu. hirsuta, Lu. (Trichophoromyia) spp., Lu. llanosmartinsi and Lu. whitmani. Lutzomyia sherlocki, Lu. walkeri and Lu. llanosmartinsi had the highest infection rates (8%, 7% and 6%, respectively). We identified Leishmania guyanensis in two Lu. whitmani pools, and L. braziliensis in two Lu. llanosmartinsi pools and one Lu. davisi pool. Based on our collections there is high sand fly diversity in Madre de Dios, with differences in sand fly abundance and species composition across sites. We identified 14 sand fly species naturally infected with Leishmania spp., having detected natural infection with L. (V.) guyanensis and L. (V.) braziliensis in three sand fly species. These results suggest the presence of several potential vectors that vary in their spatial and geographical distribution, which could explain the high prevalence of CL cases in this region.

Association between human papillomavirus and human T-lymphotropic virus in indigenous women from the Peruvian Amazon.

PubMed

Blas, Magaly M; Alva, Isaac E; Garcia, Patricia J; Carcamo, Cesar; Montano, Silvia M; Muñante, Ricardo; Zunt, Joseph R

2012-01-01

No association between the Human T-cell lymphotropic virus (HTLV), an oncogenic virus that alters host immunity, and the Human Papillomavirus (HPV) has previously been reported. Examining the association between these two viruses may permit the identification of a population at increased risk for developing cervical cancer. Between July 2010 and February 2011, we conducted a cross-sectional study among indigenous Amazonian Peruvian women from the Shipibo-Konibo ethnic group, a group with endemic HTLV infection. We recruited women between 15 and 39 years of age who were living in the cities of Lima and Ucayali. Our objectives were to determine the association between HTLV and: (i) HPV infection of any type, and (ii) high-risk HPV type infection. Sexually active Shipibo-Konibo women were screened for HTLV-1 and HTLV-2 infections. All HTLV-1 or -2 positive women, along with two community-matched HTLV negative sexually active Shipibo-Konibo controls were later tested for the presence of HPV DNA, conventional cytology, and HIV. We screened 1,253 Shipibo-Konibo women, observing a prevalence of 5.9% (n = 74) for HTLV-1 and 3.8% (n = 47) for HTLV-2 infections. We enrolled 62 (60.8%) HTLV-1 positive women, 40 (39.2%) HTLV-2 positive women, and 205 community-matched HTLV negative controls. HTLV-1 infection was strongly associated with HPV infection of any type (43.6% vs. 29.3%; Prevalence Ratio (PR): 2.10, 95% CI: 1.53-2.87), and with high-risk HPV infection (32.3% vs. 22.4%; PR: 1.93, 95% CI: 1.04-3.59). HTLV-2 was not significantly associated with either of these HPV infections. HTLV-1 infection was associated with HPV infection of any type and with high-risk HPV infection. Future longitudinal studies are needed to evaluate the incidence of high-risk HPV infection as well as the incidence of cervical neoplasia among HTLV-1 positive women.

Synergy between land use and climate change increases future fire risk in Amazon forests

NASA Astrophysics Data System (ADS)

Le Page, Yannick; Morton, Douglas; Hartin, Corinne; Bond-Lamberty, Ben; Cardoso Pereira, José Miguel; Hurtt, George; Asrar, Ghassem

2017-12-01

Tropical forests have been a permanent feature of the Amazon basin for at least 55 million years, yet climate change and land use threaten the forest's future over the next century. Understory forest fires, which are common under the current climate in frontier forests, may accelerate Amazon forest losses from climate-driven dieback and deforestation. Far from land use frontiers, scarce fire ignitions and high moisture levels preclude significant burning, yet projected climate and land use changes may increase fire activity in these remote regions. Here, we used a fire model specifically parameterized for Amazon understory fires to examine the interactions between anthropogenic activities and climate under current and projected conditions. In a scenario of low mitigation efforts with substantial land use expansion and climate change - Representative Concentration Pathway (RCP) 8.5 - projected understory fires increase in frequency and duration, burning 4-28 times more forest in 2080-2100 than during 1990-2010. In contrast, active climate mitigation and land use contraction in RCP4.5 constrain the projected increase in fire activity to 0.9-5.4 times contemporary burned area. Importantly, if climate mitigation is not successful, land use contraction alone is very effective under low to moderate climate change, but does little to reduce fire activity under the most severe climate projections. These results underscore the potential for a fire-driven transformation of Amazon forests if recent regional policies for forest conservation are not paired with global efforts to mitigate climate change.

Extreme Drought Events Revealed in Amazon Tree Ring Records

NASA Astrophysics Data System (ADS)

Jenkins, H. S.; Baker, P. A.; Guilderson, T. P.

2010-12-01

The Amazon basin is a center of deep atmospheric convection and thus acts as a major engine for global hydrologic circulation. Yet despite its significance, a full understanding of Amazon rainfall variability remains elusive due to a poor historical record of climate. Temperate tree rings have been used extensively to reconstruct climate over the last thousand years, however less attention has been given to the application of dendrochronology in tropical regions, in large part due to a lower frequency of tree species known to produce annual rings. Here we present a tree ring record of drought extremes from the Madre de Dios region of southeastern Peru over the last 190 years. We confirm that tree ring growth in species Cedrela odorata is annual and show it to be well correlated with wet season precipitation. This correlation is used to identify extreme dry (and wet) events that have occurred in the past. We focus on drought events identified in the record as drought frequency is expected to increase over the Amazon in a warming climate. The Cedrela chronology records historic Amazon droughts of the 20th century previously identified in the literature and extends the record of drought for this region to the year 1816. Our analysis shows that there has been an increase in the frequency of extreme drought (mean recurrence interval = 5-6 years) since the turn of the 20th century and both Atlantic and Pacific sea surface temperature (SST) forcing mechanisms are implicated.

Local and remote climatic impacts due to land use degradation in the Amazon "Arc of Deforestation"

NASA Astrophysics Data System (ADS)

Silva, Maria Elisa Siqueira; Pereira, Gabriel; da Rocha, Rosmeri Porfírio

2016-08-01

Many numerical studies, among them, global and regional models, have been used to simulate climatic impact due to Amazon deforestation. Most of them did not consider deforestation as usually observed and the induced dynamic changes. The present study explores the physical impacts due to Amazon deforestation by considering local and remote changes in the circulation and thermodynamics. For this, numerical experiments were conducted with RegCM3 using a relatively fine horizontal grid spacing (50 km), more realistic deforested areas (similar to the highway-network-shaped), and an updated land use map. The studied period was 2001-2006 October-March. As in most previous studies focusing on Amazon deforestation, the RegCM3-simulated air temperature increases over degraded areas, ranging from 1.0 to 2.5 °C, and precipitation decreases of around 10 %. This result is mainly related to depletion in evapotranspiration rates provided by lesser soil water extraction by the degraded vegetation. The weakening of upward motion in the mid-upper troposphere is an associated mechanism that explains the precipitation decrease after Amazon deforestation. A new result is the simulated precipitation increase, about 10 %, over the eastern South America and the adjacent South Atlantic Ocean. In these areas, the precipitation increase during October-March is associated with intensification of upper-level high pressure (the Bolivian high) coupled with negative geopotential height anomalies southeastward of the center of the high.

GLCF: Data & Products

Science.gov Websites

Imagery Products Derived from Satellite Imagery Landsat Forest Change Products Amazon Basin Central Africa Paraguay Coastal Marsh Health Index Forest Cover Change Impervious Surface Cover Landsat Mosaics Landsat Guides * Data Policies * Restricted Access Quick Links * EROS Data Center * Global Change Master

Vivid valleys, pallid peaks? Hypsometric variations and rural-urban land change in the Central Peruvian Andes.

PubMed

Haller, Andreas

2012-11-01

What happens to the land cover within the hinterland's altitudinal belts while Central Andean cities are undergoing globalization and urban restructuring? What conclusions can be drawn about changes in human land use? By incorporating a regional altitudinal zonation model, direct field observations and GIS analyses of remotely sensed long term data, the present study examines these questions using the example of Huancayo Metropolitano - an emerging Peruvian mountain city of 420,000 inhabitants, situated at 3260 m asl in the Mantaro Valley. The study's results indicate that rapid urban growth during the late 1980s and early 1990s was followed by the agricultural intensification and peri-urban condominization at the valley floor ( quechua ) - since the beginning of Peru's neoliberal era. Moreover, regarding the adjoining steep slopes ( suni ) and subsequent grassland ecosystems ( puna ), the research output presents land cover change trajectories that clearly show an expansion of human land use, such as reforestation for wood production and range burning for livestock grazing, even at high altitudes - despite rural-urban migration trends and contrary to several results of extra-Andean studies. Consequently, rural-urban planners and policy makers are challenged to focus on the manifold impacts of globalization on human land use - at all altitudinal belts of the Andean city's hinterland: toward sustainable mountain development that bridges the social and physical gaps - from the bottom up.

Water Balance in the Amazon Basin from a Land Surface Model Ensemble

NASA Technical Reports Server (NTRS)

Getirana, Augusto C. V.; Dutra, Emanuel; Guimberteau, Matthieu; Kam, Jonghun; Li, Hong-Yi; Decharme, Bertrand; Zhang, Zhengqiu; Ducharne, Agnes; Boone, Aaron; Balsamo, Gianpaolo;

Amazon River carbon dioxide outgassing fuelled by wetlands.

PubMed

Abril, Gwenaël; Martinez, Jean-Michel; Artigas, L Felipe; Moreira-Turcq, Patricia; Benedetti, Marc F; Vidal, Luciana; Meziane, Tarik; Kim, Jung-Hyun; Bernardes, Marcelo C; Savoye, Nicolas; Deborde, Jonathan; Souza, Edivaldo Lima; Albéric, Patrick; Landim de Souza, Marcelo F; Roland, Fabio

2014-01-16

River systems connect the terrestrial biosphere, the atmosphere and the ocean in the global carbon cycle. A recent estimate suggests that up to 3 petagrams of carbon per year could be emitted as carbon dioxide (CO2) from global inland waters, offsetting the carbon uptake by terrestrial ecosystems. It is generally assumed that inland waters emit carbon that has been previously fixed upstream by land plant photosynthesis, then transferred to soils, and subsequently transported downstream in run-off. But at the scale of entire drainage basins, the lateral carbon fluxes carried by small rivers upstream do not account for all of the CO2 emitted from inundated areas downstream. Three-quarters of the world's flooded land consists of temporary wetlands, but the contribution of these productive ecosystems to the inland water carbon budget has been largely overlooked. Here we show that wetlands pump large amounts of atmospheric CO2 into river waters in the floodplains of the central Amazon. Flooded forests and floating vegetation export large amounts of carbon to river waters and the dissolved CO2 can be transported dozens to hundreds of kilometres downstream before being emitted. We estimate that Amazonian wetlands export half of their gross primary production to river waters as dissolved CO2 and organic carbon, compared with only a few per cent of gross primary production exported in upland (not flooded) ecosystems. Moreover, we suggest that wetland carbon export is potentially large enough to account for at least the 0.21 petagrams of carbon emitted per year as CO2 from the central Amazon River and its floodplains. Global carbon budgets should explicitly address temporary or vegetated flooded areas, because these ecosystems combine high aerial primary production with large, fast carbon export, potentially supporting a substantial fraction of CO2 evasion from inland waters.

Deforestation control in Mato Grosso: a new model for slowing the loss of Brazil's Amazon forest.

PubMed

Fearnside, Philip M

2003-08-01

Controlling deforestation in Brazil's Amazon region has long been illusive despite repeated efforts of government authorities to slow the process. From 1997 to 2000, deforestation rates in Brazil's 9-state "Legal Amazon" region continually crept upward. Now, a licensing and enforcement program for clearing by large farmers and ranchers in the state of Mato Grosso appears to be having an effect. The deforestation rate in Mato Grosso was already beginning to slacken before initiation of the program in 1999, but examination of county-level data suggests that deforestation in already heavily cleared areas was falling due to lack of suitable uncleared land, while little-cleared areas were experiencing rapid deforestation. Following initiation of the program, the clearing rates declined in the recent frontiers. Areas with greater enforcement effort also appear to have experienced greater declines. Demonstration of government ability to enforce regulations and influence trends is important to domestic and international debates regarding use of avoided deforestation to mitigate global warming.

Water stress detection in the Amazon using radar

NASA Astrophysics Data System (ADS)

van Emmerik, Tim; Steele-Dunne, Susan; Paget, Aaron; Oliveira, Rafael S.; Bittencourt, Paulo R. L.; Barros, Fernanda de V.; van de Giesen, Nick

2017-07-01

The Amazon rainforest plays an important role in the global water and carbon cycle, and though it is predicted to continue drying in the future, the effect of drought remains uncertain. Developments in remote sensing missions now facilitate large-scale observations. The RapidScat scatterometer (Ku band) mounted on the International Space Station observes the Earth in a non-Sun-synchronous orbit, which allows for studying changes in the diurnal cycle of radar backscatter over the Amazon. Diurnal cycles in backscatter are significantly affected by the state of the canopy, especially during periods of increased water stress. We use RapidScat backscatter time series and water deficit measurements from dendrometers in 20 trees during a 9 month period to relate variations in backscatter to increased tree water deficit. Morning radar bacskcatter dropped significantly with increased tree water deficit measured with dendrometers. This provides unique observational evidence that demonstrates the sensitivity of radar backscatter to vegetation water stress, highlighting the potential of drought detection and monitoring using radar.

Methods for in situ Mesocosm Water Table Manipulation in Amazon Peatlands

NASA Astrophysics Data System (ADS)

Sarno, B. G.; Guardia, J. R.; Torres, M. G.; Lopez, J. G.; Rios, M. L.; Saquiray, L. M.; Rodriguez, T. C.; Rivera, P. V.; Van Haren, J. L. M.; Cadillo-Quiroz, H.

2016-12-01

Rainfall manipulation in tropical Amazon rainforests has previously been used to analyze the effects of rapidly changing drought and flood seasons on canopy dynamics, above-ground ecological function and greenhouse gas cycles. We chose to focus on variance below the rootline due to the greater carbon mass and impact of this region and the variables affecting it. We designed and implemented a system that manipulates above and below ground water exposure to control soil saturation. Isolation of soil sample was collected using a PVC pipe submerged 50 cm into the ground with an overhead watershed and an underground water filter. Similarly, a control sample of the above ground water was collected. Above ground water control was performed, not unlike previous systems, using overhead cover, drainage and rerouting, constructed using 1 inch PVC sections configured to allow 25% shed, 50% shed, and 75% increase. Underground filters were designed using variable clay concentrations to achieve desired permeability and flow rate. We selected kiln-fire pure clay discs, instead of poly-acrylamide discs, to enable a steady flow of 0.83 mL/hr. In addition, we adjusted the concentration of the clay disc with sand buffering and carbon lacing at different mass concentrations to allow direct controls of the flow rate, as high as 12.45 mL/hr. Using pure clay concentrations of 100%, 75%, and 50% by mass, and lacing the filters with carbon fill of 10%, 20%, and 30% by volume, before kiln firing, allows much more desirable flow rates. These significant increases in flow rate allow for better control of both above and below ground water exposure. Such a system will enable a more complete geochemical and microbiological analysis of soil and water within this highly variable region of the rain forest. Construction and installation of the submerged towers has been performed at numerous sites along the Peruvian Amazon River basin. Monitoring soil respiration will be performed on the current installations on a continuous schedule for 6 months, in efforts to understand the effects of water table control on the microbial community respiration and greenhouse gases production in the tropical rainforest peatlands. Our work will allow for a more complete understanding of variation in greenhouse gas sources and the ecological carbon cycle due to water table change.

Aerosol climate change effects on land ecosystem services.

PubMed

Unger, N; Yue, X; Harper, K L

2017-08-24

A coupled global aerosol-carbon-climate model is applied to assess the impacts of aerosol physical climate change on the land ecosystem services gross primary productivity (GPP) and net primary productivity (NPP) in the 1996-2005 period. Aerosol impacts are quantified on an annual mean basis relative to the hypothetical aerosol-free world in 1996-2005, the global climate state in the absence of the historical rise in aerosol pollution. We examine the separate and combined roles of fast feedbacks associated with the land and slow feedbacks associated with the ocean. We consider all fossil fuel, biofuel and biomass burning aerosol emission sources as anthropogenic. The effective radiative forcing for aerosol-radiation interactions is -0.44 W m -2 and aerosol-cloud interactions is -1.64 W m -2 . Aerosols cool and dry the global climate system by -0.8 °C and -0.08 mm per day relative to the aerosol-free world. Without aerosol pollution, human-induced global warming since the preindustrial would have already exceeded the 1.5 °C aspirational limit set in the Paris Agreement by the 1996-2005 decade. Aerosol climate impacts on the global average land ecosystem services are small due to large opposite sign effects in the tropical and boreal biomes. Aerosol slow feedbacks associated with the ocean strongly dominate impacts in the Amazon and North American Boreal. Aerosol cooling of the Amazon by -1.2 °C drives NPP increases of 8% or +0.76 ± 0.61 PgC per year, a 5-10 times larger impact than estimates of diffuse radiation fertilization by biomass burning aerosol in this region. The North American Boreal suffers GPP and NPP decreases of 35% due to aerosol-induced cooling and drying (-1.6 °C, -0.14 mm per day). Aerosol-land feedbacks play a larger role in the eastern US and Central Africa. Our study identifies an eco-climate teleconnection in the polluted earth system: the rise of the northern hemisphere mid-latitude reflective aerosol pollution layer causes long range cooling that protects Amazon NPP by 8% and suppresses boreal NPP by 35%.

Towards SWOT data assimilation for hydrology : automatic calibration of global flow routing model parameters in the Amazon basin

NASA Astrophysics Data System (ADS)

Mouffe, M.; Getirana, A.; Ricci, S. M.; Lion, C.; Biancamaria, S.; Boone, A.; Mognard, N. M.; Rogel, P.

2011-12-01

The Surface Water and Ocean Topography (SWOT) mission is a swath mapping radar interferometer that will provide global measurements of water surface elevation (WSE). The revisit time depends upon latitude and varies from two (low latitudes) to ten (high latitudes) per 22-day orbit repeat period. The high resolution and the global coverage of the SWOT data open the way for new hydrology studies. Here, the aim is to investigate the use of virtually generated SWOT data to improve discharge simulation using data assimilation techniques. In the framework of the SWOT virtual mission (VM), this study presents the first results of the automatic calibration of a global flow routing (GFR) scheme using SWOT VM measurements for the Amazon basin. The Hydrological Modeling and Analysis Platform (HyMAP) is used along with the MOCOM-UA multi-criteria global optimization algorithm. HyMAP has a 0.25-degree spatial resolution and runs at the daily time step to simulate discharge, water levels and floodplains. The surface runoff and baseflow drainage derived from the Interactions Sol-Biosphère-Atmosphère (ISBA) model are used as inputs for HyMAP. Previous works showed that the use of ENVISAT data enables the reduction of the uncertainty on some of the hydrological model parameters, such as river width and depth, Manning roughness coefficient and groundwater time delay. In the framework of the SWOT preparation work, the automatic calibration procedure was applied using SWOT VM measurements. For this Observing System Experiment (OSE), the synthetical data were obtained applying an instrument simulator (representing realistic SWOT errors) for one hydrological year to HYMAP simulated WSE using a "true" set of parameters. Only pixels representing rivers larger than 100 meters within the Amazon basin are considered to produce SWOT VM measurements. The automatic calibration procedure leads to the estimation of optimal parametersminimizing objective functions that formulate the difference between SWOT observations and modeled WSE using a perturbed set of parameters. Different formulations of the objective function were used, especially to account for SWOT observation errors, as well as various sets of calibration parameters.

Peruvian Maca (Lepidium peruvianum): (I) Phytochemical and Genetic Differences in Three Maca Phenotypes.

PubMed

Meissner, Henry O; Mscisz, Alina; Mrozikiewicz, Mieczyslaw; Baraniak, Marek; Mielcarek, Sebastian; Kedzia, Bogdan; Piatkowska, Ewa; Jólkowska, Justyna; Pisulewski, Pawel

2015-09-01

Glucosinolates were previously reported as physiologically-important constituents present in Peruvian Maca (Lepidium peruvianum Chacon) and linked to various therapeutic functions of differently-colored Peruvian Maca hypocotyls. In two separate Trials, three colours of Maca hypocotyls "Black", "Red" and "Yellow" (termed "Maca phenotypes"), were selected from mixed crops of Peruvian Maca for laboratory studies as fresh and after being dried. Individual Maca phenotypes were cultivated in the highlands of the Peruvian Andes at 4,200m a.s.l. (Junin and Ninacaca). Glucosinolate levels, chromatographic HPLC profiles and DNA variability in the investigated Maca phenotypes are presented. Genotypic profiles were determined by the ISSR-PCR and RAPD techniques. Compared to the Black and Red phenotypes, the Yellow phenotype contained much lower Glucosinolate levels measured against Glucotropaeolin and m-methoxy-glucotropaeolin standards, and exhibited different RAPD and ISSR-PCR reactions. The Red Maca phenotype showed the highest concentrations of Glucosinolates as compared to the Black and Yellow Maca. It appears that the traditional system used by natives of the Peruvian Andean highlands in preparing Maca as a vegetable dish (boiling dried Maca after soaking in water), to supplement their daily meals, is as effective as laboratory methods - for extracting Glucosinolates, which are considered to be one of the key bioactive constituents responsible for therapeutic functions of Peruvian Maca phenotypes. It is reasonable to assume that the HPLC and DNA techniques combined, or separately, may assist in determining ID and "Fingerprints" identifying individual Peruvian Maca phenotypes, hence confirming the authenticity of marketable Maca products. The above assumptions warrant further laboratory testing.

Peruvian Maca (Lepidium peruvianum): (I) Phytochemical and Genetic Differences in Three Maca Phenotypes

PubMed Central

Meissner, Henry O.; Mscisz, Alina; Mrozikiewicz, Mieczyslaw; Baraniak, Marek; Mielcarek, Sebastian; Kedzia, Bogdan; Piatkowska, Ewa; Jólkowska, Justyna; Pisulewski, Pawel

2015-01-01

Glucosinolates were previously reported as physiologically-important constituents present in Peruvian Maca (Lepidium peruvianum Chacon) and linked to various therapeutic functions of differently-colored Peruvian Maca hypocotyls. In two separate Trials, three colours of Maca hypocotyls “Black”, “Red” and “Yellow” (termed “Maca phenotypes”), were selected from mixed crops of Peruvian Maca for laboratory studies as fresh and after being dried. Individual Maca phenotypes were cultivated in the highlands of the Peruvian Andes at 4,200m a.s.l. (Junin and Ninacaca). Glucosinolate levels, chromatographic HPLC profiles and DNA variability in the investigated Maca phenotypes are presented. Genotypic profiles were determined by the ISSR-PCR and RAPD techniques. Compared to the Black and Red phenotypes, the Yellow phenotype contained much lower Glucosinolate levels measured against Glucotropaeolin and m-methoxy-glucotropaeolin standards, and exhibited different RAPD and ISSR-PCR reactions. The Red Maca phenotype showed the highest concentrations of Glucosinolates as compared to the Black and Yellow Maca. It appears that the traditional system used by natives of the Peruvian Andean highlands in preparing Maca as a vegetable dish (boiling dried Maca after soaking in water), to supplement their daily meals, is as effective as laboratory methods - for extracting Glucosinolates, which are considered to be one of the key bioactive constituents responsible for therapeutic functions of Peruvian Maca phenotypes. It is reasonable to assume that the HPLC and DNA techniques combined, or separately, may assist in determining ID and “Fingerprints” identifying individual Peruvian Maca phenotypes, hence confirming the authenticity of marketable Maca products. The above assumptions warrant further laboratory testing. PMID:26508907

Ecosystem heterogeneity determines the ecological resilience of the Amazon to climate change

PubMed Central

Longo, Marcos; Baccini, Alessandro; Phillips, Oliver L.; Lewis, Simon L.; Alvarez-Dávila, Esteban; Segalin de Andrade, Ana Cristina; Brienen, Roel J. W.; Erwin, Terry L.; Feldpausch, Ted R.; Monteagudo Mendoza, Abel Lorenzo; Nuñez Vargas, Percy; Prieto, Adriana; Silva-Espejo, Javier Eduardo; Malhi, Yadvinder; Moorcroft, Paul R.

2016-01-01

Amazon forests, which store ∼50% of tropical forest carbon and play a vital role in global water, energy, and carbon cycling, are predicted to experience both longer and more intense dry seasons by the end of the 21st century. However, the climate sensitivity of this ecosystem remains uncertain: several studies have predicted large-scale die-back of the Amazon, whereas several more recent studies predict that the biome will remain largely intact. Combining remote-sensing and ground-based observations with a size- and age-structured terrestrial ecosystem model, we explore the sensitivity and ecological resilience of these forests to changes in climate. We demonstrate that water stress operating at the scale of individual plants, combined with spatial variation in soil texture, explains observed patterns of variation in ecosystem biomass, composition, and dynamics across the region, and strongly influences the ecosystem’s resilience to changes in dry season length. Specifically, our analysis suggests that in contrast to existing predictions of either stability or catastrophic biomass loss, the Amazon forest’s response to a drying regional climate is likely to be an immediate, graded, heterogeneous transition from high-biomass moist forests to transitional dry forests and woody savannah-like states. Fire, logging, and other anthropogenic disturbances may, however, exacerbate these climate change-induced ecosystem transitions. PMID:26711984

Ecosystem heterogeneity determines the ecological resilience of the Amazon to climate change.

PubMed

Levine, Naomi M; Zhang, Ke; Longo, Marcos; Baccini, Alessandro; Phillips, Oliver L; Lewis, Simon L; Alvarez-Dávila, Esteban; Segalin de Andrade, Ana Cristina; Brienen, Roel J W; Erwin, Terry L; Feldpausch, Ted R; Monteagudo Mendoza, Abel Lorenzo; Nuñez Vargas, Percy; Prieto, Adriana; Silva-Espejo, Javier Eduardo; Malhi, Yadvinder; Moorcroft, Paul R

2016-01-19

Amazon forests, which store ∼ 50% of tropical forest carbon and play a vital role in global water, energy, and carbon cycling, are predicted to experience both longer and more intense dry seasons by the end of the 21st century. However, the climate sensitivity of this ecosystem remains uncertain: several studies have predicted large-scale die-back of the Amazon, whereas several more recent studies predict that the biome will remain largely intact. Combining remote-sensing and ground-based observations with a size- and age-structured terrestrial ecosystem model, we explore the sensitivity and ecological resilience of these forests to changes in climate. We demonstrate that water stress operating at the scale of individual plants, combined with spatial variation in soil texture, explains observed patterns of variation in ecosystem biomass, composition, and dynamics across the region, and strongly influences the ecosystem's resilience to changes in dry season length. Specifically, our analysis suggests that in contrast to existing predictions of either stability or catastrophic biomass loss, the Amazon forest's response to a drying regional climate is likely to be an immediate, graded, heterogeneous transition from high-biomass moist forests to transitional dry forests and woody savannah-like states. Fire, logging, and other anthropogenic disturbances may, however, exacerbate these climate change-induced ecosystem transitions.

Investigating smoke's influence on primary production throughout the Amazon

NASA Astrophysics Data System (ADS)

Flanner, M. G.; Mahowald, N. M.; Zender, C. S.; Randerson, J. T.; Tosca, M. G.

2007-12-01

Smoke from annual burning in the Amazon causes large reduction in surface insolation and increases the diffuse fraction of photosynthetically-active radiation (PAR). These effects have competing influence on gross primary production (GPP). Recent studies indicate that the sign of net influence depends on aerosol optical depth, but the magnitude of smoke's effect on continental-scale carbon cycling is very poorly constrained and may constitute an important term of fire's net impact on carbon storage. To investigate widespread effects of Amazon smoke on surface radiation properties, we apply a version of the NCAR Community Atmosphere Model with prognostic aerosol transport, driven with re-analysis winds. Carbon aerosol emissions are derived from the Global Fire Emissions Database (GFED). We use AERONET observations to identify model biases in aerosol optical depth, single-scatter albedo, and surface radiative forcing, and prescribe new aerosol optical properties based on field observations to improve model agreement with AERONET data. Finally, we quantify a potential range of smoke-induced change in large-scale GPP based on: 1) ground measurements of GPP in the Amazon as a function of aerosol optical depth and diffuse fraction of PAR, and 2) empirical functions of ecosystem-scale photosynthesis rates currently employed in models such as the Community Land Model (CLM).

Interculturality for Afro-Peruvians: Towards a Racially Inclusive Education in Peru

ERIC Educational Resources Information Center

Valdiviezo, Laura Alicia

2006-01-01

Intercultural education policy and programs in Peru emerged as a response to the right of education for marginalised indigenous populations. Under the influence of international dialogue regarding education for all, Peruvian policy has recently proposed interculturality as a guiding principle of education for all Peruvians. In this context,…

Through a Glass Darkly? Indigeneity, Information, and the Image of the Peruvian University.

ERIC Educational Resources Information Center

Post, David

1994-01-01

Drawing on surveys of Peruvians, a discussion of Peruvian university education looks at how realistic students' expectations of the economic benefits of university attendance are. Differences in perceptions among ethnic groups (Spanish-speaking and Quechua-speaking) were examined, and implications for social integration in such a society are…

British medicine in the Peruvian Andes: the travels of Archibald Smith M.D. (1820-1870).

PubMed

Lossio, Jorge

2006-01-01

This article traces the travels of the Scottish physician Archibald Smith through the Peruvian Andes between the 1820s and 1860s. Despite his prominent role in the nineteenth-century Peruvian medical scene, almost nothing has been written on Archibald Smith. By exploring Smith's medical activities, publications, and debates, this article intends to uncover unexplored areas of Peruvian medical history, such as the animosity between local and foreign physicians during the post-Independence war era and the important role played by medical geography as a scientific discipline for redefining ethnical and regional issues.

Forest policy reform in Brazil

Treesearch

S. Bauch; E. Sills; L.C. Rodriguez Estraviz; K. McGinley; F. Cubbage

2009-01-01

Rapid deforestation in the Brazilian Amazon, caused by economic, social, and policy factors, has focused global and national attention on protecting this valuable forest resource. In response, Brazil reformed its federal forest laws in 2006, creating new regulatory, development, and incentive policy instruments and institutions. Federal forestry responsibilities are...

Interview with Guillermo Arrévalo, a Shipibo urban shaman, by Roger Rumrrill. Interview by Roger Rumrrill.

PubMed

Arrévalo, Guillermo

2005-06-01

Roger Rumrrill, a journalist headquartered in Lima, Peru who is a noted expert on the Peruvian Amazon, interviewed Guillermo Arrévalo, a Shipibo urban shaman in Pucallpa, who utilizes ayahuasca in curing rituals. Sr. Arrévalo comments on the phenomenon known as drug tourism, where urban men and women provide tours for foreigners, for a price, to experience drug-induced mystical experiences in urban settings like Iquitos and Pucallpa, Peru, as well as in Brazil, Bolivia and Ecuador. Arrévalo distinguishes between folkloric shamanism and touristic practices which are currently in vogue and, in his opinion, are the result of people trying to resolve personal problems. Arrévalo sees a spiritual and psychological crisis in Europe and North American society. The Shipibo shaman laments the misuse of toxic plants as additives to the ayahuasca potion and the damage that these plants cause to the unsuspecting tourist who doesn't really get his money's worth from shamans without experience, people who are liars and cheats and who don't have the capacity, the preparation or the boldness to do the work.

Venezuelan Equine Encephalitis Virus in Iquitos, Peru: Urban Transmission of a Sylvatic Strain

PubMed Central

Morrison, Amy C.; Forshey, Brett M.; Notyce, Desiree; Astete, Helvio; Lopez, Victor; Rocha, Claudio; Carrion, Rebecca; Carey, Cristhiam; Eza, Dominique; Montgomery, Joel M.; Kochel, Tadeusz J.

2008-01-01

Enzootic strains of Venezuelan equine encephalitis virus (VEEV) have been isolated from febrile patients in the Peruvian Amazon Basin at low but consistent levels since the early 1990s. Through a clinic-based febrile surveillance program, we detected an outbreak of VEEV infections in Iquitos, Peru, in the first half of 2006. The majority of these patients resided within urban areas of Iquitos, with no report of recent travel outside the city. To characterize the risk factors for VEEV infection within the city, an antibody prevalence study was carried out in a geographically stratified sample of urban areas of Iquitos. Additionally, entomological surveys were conducted to determine if previously incriminated vectors of enzootic VEEV were present within the city. We found that greater than 23% of Iquitos residents carried neutralizing antibodies against VEEV, with significant associations between increased antibody prevalence and age, occupation, mosquito net use, and overnight travel. Furthermore, potential vector mosquitoes were widely distributed across the city. Our results suggest that while VEEV infection is more common in rural areas, transmission also occurs within urban areas of Iquitos, and that further studies are warranted to identify the precise vectors and reservoirs involved in urban VEEV transmission. PMID:19079600

Changes of cloudiness over tropical land during the past few decades and its link to global climate change

NASA Astrophysics Data System (ADS)

Arias, P.; Fu, R.; Li, W.

2007-12-01

Tropical forests play a key role in determining the global carbon-climate feedback in the 21st century. Changes in rainforest growth and mortality rates, especially in the deep and least perturbed forest areas, have been consistently observed across global tropics in recent years. Understanding the underlying causes of these changes, especially their links to the global climate change, is especially important in determining the future of the tropical rainforests in the 21st century. Previous studies have mostly focus on the potential influences from elevated atmospheric CO2 and increasing surface temperature. Because the rainforests in wet tropical region is often light limited, we explore whether cloudiness have changed, if so, whether it is consistent with that expected from changes in forest growth rate. We will report our observational analysis examining the trends in annual average shortwave (SW) downwelling radiation, total cloud cover, and cumulus cover over the tropical land regions and to link them with trends in convective available potencial energy (CAPE). ISCCP data and radiosonde records available from the Department of Atmospheric Sciences of the University of Wyoming (http://www.weather.uwyo.edu/upperair/sounding.html) are used to study the trends. The period for the trend analysis is 1984-2004 for the ISCCP data and 1980-2006 for the radiosondes. The results for the Amazon rainforest region suggest a decreasing trend in total cloud and convective cloud covers, which results in an increase in downwelling SW radiation at the surface. These changes of total and convective clouds are consistent with a trend of decreasing CAPE and an elevated Level of Free Convection (LFC) height, as obtained from the radiosondes. All the above mentioned trends are statistically significant based on the Mann-Kendall test with 95% of confidence. These results consistently suggest the downward surface solar radiation has been increasing since 1984, result from a decrease of convective and total cloudiness over the Southern Amazon basin, due to an increase of LFC and atmospheric thermodynamic stability. Such an increase of surface SW radiation probably has contributed to the increasing in growth rate for the forests in the Amazon forests. Currently, the same analysis is being applied using radiosonde data from the Comprehensive Aerological Reference Data Set (CARDS) over the Amazon and Congo basins and the Southeast Asia. Our objective is to identify changes in cloudiness over tropical land and identify its underlying causes, especially the link to changes in surface temperature and humidity.

Carbon balance variability in the Amazon Basin with climate change based on regular atmospheric profiling of greenhouse gases

NASA Astrophysics Data System (ADS)

Gatti, L.; Domingues, L. G.; Gloor, M.; Miller, J. B.; Peters, W.; Silva, M. G.; Correia, C. S. D. C.; Basso, L. S.; Alden, C. B.; Borges, V. F.; Marani, L.; Santos, R. S.; Crispim, S. P.; Sanches, A.; Costa, W. R.

2017-12-01

Net carbon exchange between tropical land and the atmosphere is potentially important because the vast amounts of carbon in forests and soils can be released on short time-scales e.g. via deforestation or changes in temperature and precipitation. Such changes may thus cause feedbacks on global climate as have been predicted in earth system models. The Amazon is the most significant region in the global carbon cycle, hosting by far the largest carbon vegetation and soil carbon pools ( 200 PgC). From 2010 onwards we have extended an earlier greenhouse gas measurement program to include regular vertical profiles of CO2 from the ground up to 4.5 km height at four sites along the main air-stream over the Amazon Basin. Our measurements demonstrate that surface flux signals are primarily concentrated to the lower 2 km and thus vertical profile measurements are ideally suited to estimate greenhouse gas balances. To understand the role of Amazon in global carbon budget it is important to maintain a long period of measurements that can represent the whole region. Our results already permit a range of insights about the magnitude, seasonality, inter-annual variation of carbon fluxes and their climate controls. Most recent years have been anomalously hot with the southern part of the Basin having warmed the most. Precipitation regimes also seem to have shifted with an increase in extreme floods. For the specific period we will discuss the period of 2010 to 2016, where the years 2010 and 2015/16 were anomalously dry and hot (both El Nino years) and the year 2013 was the wettest and coldest year. This period provides an interesting contrast of climatic conditions in a warming world with increasing human pressures and we will present the carbon balance for the basin during the last 7 years. We will analyze the effect of this climate variability on annual and seasonal carbon balances for these seven years using our atmospheric data. Our data permit us not only to estimate net CO2fluxes, but using carbon monoxide, we estimate carbon release via fires and thus the net carbon balance of the unburned land vegetation. We will relate fire emissions to controls of land vegetation functioning and independent diagnostics like fire counts. We will also discuss what our results suggest for the role of the tropics of the global carbon balance.

Differences in sperm storage and remating propensity between adult females of two morphotypes of the Anastrepha fraterculus (Diptera: Tephritidae) cryptic species complex.

PubMed

Abraham, S; Rull, J; Mendoza, M; Liendo, M C; Devescovi, F; Roriz, A K; Kovaleski, A; Segura, D F; Vera, M T

2014-06-01

The South American fruit fly, Anastrepha fraterculus, is a complex of cryptic species composed of at least seven morphotypes. Some of them, such as the Peruvian and Brazilian 1 morphotypes (which include Argentinean populations), exhibit strong pre-copulatory isolation, yet it is possible to obtain heterotypic crosses when forcing copulation of adults under laboratory conditions. The cross involving Peruvian males and Argentinean females produces F1 offspring with reduced viability in terms of egg hatch. This low hatchability could be caused by a reduced amount of sperm transferred to and stored by females mated with heterotypic males, which in turn could affect their post-copulatory behaviour. To test these hypotheses, we investigated sperm transfer and female mating and remating behaviour for homotypic and heterotypic crosses between adults of two morphotypes (Brazilian 1 [Argentina] and Peruvian [Peru]) of the A. fraterculus cryptic species complex. As reported before, Argentinean males and females mated earlier in the day than the other three mating combinations. Peruvian females engaged in shorter copulation times than Argentinean females. Peruvian females tended to store smaller quantities of sperm than Argentinean females, and almost a half of the crosses involving Argentinean males and Peruvian females were unsuccessful (no sperm transfer). However, there was no evidence that the cross between Peruvian males and Argentinean females resulted in storage of a critically small amount of sperm (posing risk of sperm shortage). Argentinean females were more willing to remate than Peruvian females, irrespective of male morphotype, but latency to remating was not affected by male or female morphotype. This study shows that mating behaviour differs between some of the A. fraterculus complex morphotypes, with female but not male morphotype determining female likelihood to remate.

Synergy between land use and climate change increases future fire risk in Amazon forests

DOE PAGES

Le Page, Yannick; Morton, Douglas; Hartin, Corinne; ...

2017-12-20

Tropical forests have been a permanent feature of the Amazon basin for at least 55 million years, yet climate change and land use threaten the forest's future over the next century. Understory forest fires, which are common under the current climate in frontier forests, may accelerate Amazon forest losses from climate-driven dieback and deforestation. Far from land use frontiers, scarce fire ignitions and high moisture levels preclude significant burning, yet projected climate and land use changes may increase fire activity in these remote regions. Here, we used a fire model specifically parameterized for Amazon understory fires to examine the interactionsmore » between anthropogenic activities and climate under current and projected conditions. In a scenario of low mitigation efforts with substantial land use expansion and climate change – Representative Concentration Pathway (RCP) 8.5 – projected understory fires increase in frequency and duration, burning 4–28 times more forest in 2080–2100 than during 1990–2010. In contrast, active climate mitigation and land use contraction in RCP4.5 constrain the projected increase in fire activity to 0.9–5.4 times contemporary burned area. Importantly, if climate mitigation is not successful, land use contraction alone is very effective under low to moderate climate change, but does little to reduce fire activity under the most severe climate projections. These results underscore the potential for a fire-driven transformation of Amazon forests if recent regional policies for forest conservation are not paired with global efforts to mitigate climate change.« less

Response of the Amazon rainforest to late Pleistocene climate variability

NASA Astrophysics Data System (ADS)

Häggi, Christoph; Chiessi, Cristiano M.; Merkel, Ute; Mulitza, Stefan; Prange, Matthias; Schulz, Michael; Schefuß, Enno

2017-12-01

Variations in Amazonian hydrology and forest cover have major consequences for the global carbon and hydrological cycles as well as for biodiversity. Yet, the climate and vegetation history of the lowland Amazon basin and its effect on biogeography remain debated due to the scarcity of suitable high-resolution paleoclimate records. Here, we use the isotopic composition (δD and δ13C) of plant-waxes from a high-resolution marine sediment core collected offshore the Amazon River to reconstruct the climate and vegetation history of the integrated lowland Amazon basin for the period from 50,000 to 12,800 yr before present. Our results show that δD values from the Last Glacial Maximum were more enriched than those from Marine Isotope Stage (MIS) 3 and the present-day. We interpret this trend to reflect long-term changes in precipitation and atmospheric circulation, with overall drier conditions during the Last Glacial Maximum. Our results thus suggest a dominant glacial forcing of the climate in lowland Amazonia. In addition to previously suggested thermodynamic mechanisms of precipitation change, which are directly related to temperature, we conclude that changes in atmospheric circulation are crucial to explain the temporal evolution of Amazonian rainfall variations, as demonstrated in climate model experiments. Our vegetation reconstruction based on δ13C values shows that the Amazon rainforest was affected by intrusions of savannah or more open vegetation types in its northern sector during Heinrich Stadials, while it was resilient to glacial drying. This suggests that biogeographic patterns in tropical South America were affected by Heinrich Stadials in addition to glacial-interglacial climate variability.

Synergy between land use and climate change increases future fire risk in Amazon forests

DOE Office of Scientific and Technical Information (OSTI.GOV)

Le Page, Yannick; Morton, Douglas; Hartin, Corinne

Tropical forests have been a permanent feature of the Amazon basin for at least 55 million years, yet climate change and land use threaten the forest's future over the next century. Understory forest fires, which are common under the current climate in frontier forests, may accelerate Amazon forest losses from climate-driven dieback and deforestation. Far from land use frontiers, scarce fire ignitions and high moisture levels preclude significant burning, yet projected climate and land use changes may increase fire activity in these remote regions. Here, we used a fire model specifically parameterized for Amazon understory fires to examine the interactionsmore » between anthropogenic activities and climate under current and projected conditions. In a scenario of low mitigation efforts with substantial land use expansion and climate change – Representative Concentration Pathway (RCP) 8.5 – projected understory fires increase in frequency and duration, burning 4–28 times more forest in 2080–2100 than during 1990–2010. In contrast, active climate mitigation and land use contraction in RCP4.5 constrain the projected increase in fire activity to 0.9–5.4 times contemporary burned area. Importantly, if climate mitigation is not successful, land use contraction alone is very effective under low to moderate climate change, but does little to reduce fire activity under the most severe climate projections. These results underscore the potential for a fire-driven transformation of Amazon forests if recent regional policies for forest conservation are not paired with global efforts to mitigate climate change.« less

Detection of Green up Phenomenon in Amazon Forests Using Spaceborne Solar-induced Fluorescence

NASA Astrophysics Data System (ADS)

Chen, S.; Chen, X.; Chen, J.; Cao, X.

2016-12-01

The role of Amazon forests in the global carbon budget still remains uncertain. The critical issue is whether tropical forest productivity is more limited by sunlight or rainfall. Recent studies using satellite data have challenged the paradigm of light-limited net primary production in Amazon forests and enhanced forest growth during drought conditions because of the adding effects of variations in sun-sensor geometry. To reducing uncertainties in knowing the sensitivity of Amazon rainforests to dry season droughts, we evaluated a newly emerging satellite retrieval, solar-induced fluorescence (SIF) of chlorophyll for the seasonal green-up phenomenon, providing for the first time a direct measurement related to vegetation photosynthetic activity as well as unaffected by sun-sensor geometry. Moreover, NASA's Moderate Resolution Imaging Spectroradiometer (MODIS) products (the enhanced vegetation index (EVI) and leaf area index (LAI)) and Landsat Operational Land Imager (OLI) data are also compared to evaluate this phenomenon. Here we show that the green up of Amazon forests in the study area around manas site did show in SIF of chlorophyll data in 2015 drought resulted from seasonal changes. The EVI has more apparent green up phenomenon than the NDVI data both in MODIS and OLI data, suggesting that the EVI can better reflect near-infrared (NIR) and LAI information of vegetation. The OLI data is less influenced by variations caused by bidirectional reflectance effect. In addition, SIF of chlorophyll data shows well correlation relationship with the EVI, LAI and NDVI, suggesting that the SIF of chlorophyll data present well quality to capture the characteristics of the phenology of vegetation.

Vegetation dynamics and rainfall sensitivity of the Amazon

PubMed Central

Hilker, Thomas; Lyapustin, Alexei I.; Tucker, Compton J.; Hall, Forrest G.; Myneni, Ranga B.; Wang, Yujie; Bi, Jian; Mendes de Moura, Yhasmin; Sellers, Piers J.

2014-01-01

We show that the vegetation canopy of the Amazon rainforest is highly sensitive to changes in precipitation patterns and that reduction in rainfall since 2000 has diminished vegetation greenness across large parts of Amazonia. Large-scale directional declines in vegetation greenness may indicate decreases in carbon uptake and substantial changes in the energy balance of the Amazon. We use improved estimates of surface reflectance from satellite data to show a close link between reductions in annual precipitation, El Niño southern oscillation events, and photosynthetic activity across tropical and subtropical Amazonia. We report that, since the year 2000, precipitation has declined across 69% of the tropical evergreen forest (5.4 million km2) and across 80% of the subtropical grasslands (3.3 million km2). These reductions, which coincided with a decline in terrestrial water storage, account for about 55% of a satellite-observed widespread decline in the normalized difference vegetation index (NDVI). During El Niño events, NDVI was reduced about 16.6% across an area of up to 1.6 million km2 compared with average conditions. Several global circulation models suggest that a rise in equatorial sea surface temperature and related displacement of the intertropical convergence zone could lead to considerable drying of tropical forests in the 21st century. Our results provide evidence that persistent drying could degrade Amazonian forest canopies, which would have cascading effects on global carbon and climate dynamics. PMID:25349419

Emergent Hydrological Regimes in Amazonia Determine Vegetation Productivity and Structure.

NASA Astrophysics Data System (ADS)

Ahlström, A.; Canadell, J.; Schurgers, G.; Berry, J. A.; Guan, K.; Jackson, R. B.

2016-12-01

The Amazon rain forest has a disproportionate significance for global CO2 storage and biodiversity. Earth system models (ESMs) that estimate future climate and vegetation show little agreement in simulations in Amazonia. Here we show that evapotranspiration (ET), gross primary productivity (GPP) and above ground biomass in both models and empirical data align on an emergent hydrologically determined relationship that describes a functional relationship with annual precipitation (P). The physical relationship describes the potential for plant productivity and has a breakpoint at 2000 mm annual precipitation, where the system transitions between water and radiation limitation of annual ET. While ESM GPP is generally underestimated due to a low-bias in their internally generated P, their response to annual precipitation generally matches empirical data. It is different for biomass: ESMs show some ability in capturing biomass levels in the energy-limited wet hydrological regime above 2000 mm annual precipitation but they do not fully capture the biomass structure tipping point found in empirical data at the hydrological regime breakpoint that coincide with the forest-savanna transition. This discrepancy is likely due to the relatively simple representation of disturbances, primarily fires, and vegetation dynamics found in ESMs, and implies that ESMs likely overestimate the resilience to a potential future drying of the Amazon. Future elevated CO2 may increase plant water use efficiency and shift GPP upwards, but it will not affect the breakpoint between the regimes or the susceptibility of the forest which are both determined by precipitation and its role in determining the hydrological regime. This analysis reconciles and explains the findings of many studies on the Amazon. Our results suggests that future Amazonian biomass is governed by changes in precipitation, vegetation dynamics and disturbances, none of which are well predicted and represented by ESMs. Improvements of these processes are the most pressing challenges for more accurate future predictions on the fate of the Amazon and the global tropics.

Drought impact on forest carbon dynamics and fluxes in Amazonia.

PubMed

Doughty, Christopher E; Metcalfe, D B; Girardin, C A J; Amézquita, F Farfán; Cabrera, D Galiano; Huasco, W Huaraca; Silva-Espejo, J E; Araujo-Murakami, A; da Costa, M C; Rocha, W; Feldpausch, T R; Mendoza, A L M; da Costa, A C L; Meir, P; Phillips, O L; Malhi, Y

2015-03-05

In 2005 and 2010 the Amazon basin experienced two strong droughts, driven by shifts in the tropical hydrological regime possibly associated with global climate change, as predicted by some global models. Tree mortality increased after the 2005 drought, and regional atmospheric inversion modelling showed basin-wide decreases in CO2 uptake in 2010 compared with 2011 (ref. 5). But the response of tropical forest carbon cycling to these droughts is not fully understood and there has been no detailed multi-site investigation in situ. Here we use several years of data from a network of thirteen 1-ha forest plots spread throughout South America, where each component of net primary production (NPP), autotrophic respiration and heterotrophic respiration is measured separately, to develop a better mechanistic understanding of the impact of the 2010 drought on the Amazon forest. We find that total NPP remained constant throughout the drought. However, towards the end of the drought, autotrophic respiration, especially in roots and stems, declined significantly compared with measurements in 2009 made in the absence of drought, with extended decreases in autotrophic respiration in the three driest plots. In the year after the drought, total NPP remained constant but the allocation of carbon shifted towards canopy NPP and away from fine-root NPP. Both leaf-level and plot-level measurements indicate that severe drought suppresses photosynthesis. Scaling these measurements to the entire Amazon basin with rainfall data, we estimate that drought suppressed Amazon-wide photosynthesis in 2010 by 0.38 petagrams of carbon (0.23-0.53 petagrams of carbon). Overall, we find that during this drought, instead of reducing total NPP, trees prioritized growth by reducing autotrophic respiration that was unrelated to growth. This suggests that trees decrease investment in tissue maintenance and defence, in line with eco-evolutionary theories that trees are competitively disadvantaged in the absence of growth. We propose that weakened maintenance and defence investment may, in turn, cause the increase in post-drought tree mortality observed at our plots.

Connectivity and Resilience: A Multidimensional Analysis of Infrastructure Impacts in the Southwestern Amazon

ERIC Educational Resources Information Center

Perz, Stephen G.; Shenkin, Alexander; Barnes, Grenville; Cabrera, Liliana; Carvalho, Lucas A.; Castillo, Jorge

2012-01-01

Infrastructure is a worldwide policy priority for national development via regional integration into the global economy. However, economic, ecological and social research draws contrasting conclusions about the consequences of infrastructure. We present a synthetic approach to the study of infrastructure, focusing on a multidimensional treatment…

Sung with Ink and Paper: Nicomedes Santa Cruz and the African Strand in Peru

ERIC Educational Resources Information Center

De Swanson, Rosario

2017-01-01

The poem "Ritmos negros del Perú" by Afro-Peruvian writer Nicomedes Santa Cruz recovers Afro-Peruvian history and agency through the retelling of the journey of a mythical grandmother. Through the retelling of her story, the poet claims blackness and African roots as pillars of Peruvian culture. In so doing, Santa Cruz opens the door not…

Review of the Trifolium amabile Complex in Peru, with the Description of a New Species

PubMed Central

2016-01-01

Here, we describe Trifolium absconditum sp. nov., a new species of the T. amabile complex from South America. It differs from other Peruvian Trifolia of the complex by having smaller stipules, leaves, inflorescences, and floral pieces. A key for Peruvian species of the complex is presented, and typifications for them are made when necessary and material is available in Peruvian herbaria. Thus, the number of Peruvian species in the complex is elevated to three: T. amabile, T. absconditum, and a resurrected T. peruvianum. Finally, it is suggested that Chile must be excluded from the distribution of this complex. PMID:27127681

Hydrological Retrospective of floods and droughts: Case study in the Amazon

NASA Astrophysics Data System (ADS)

Wongchuig Correa, Sly; Cauduro Dias de Paiva, Rodrigo; Carlo Espinoza Villar, Jhan; Collischonn, Walter

2017-04-01

Recent studies have reported an increase in intensity and frequency of hydrological extreme events in many regions of the Amazon basin over last decades, these events such as seasonal floods and droughts have originated a significant impact in human and natural systems. Recently, methodologies such as climatic reanalysis are being developed in order to create a coherent register of climatic systems, thus taking this notion, this research efforts to produce a methodology called Hydrological Retrospective (HR), that essentially simulate large rainfall datasets over hydrological models in order to develop a record over past hydrology, enabling the analysis of past floods and droughts. We developed our methodology on the Amazon basin, thus we used eight large precipitation datasets (more than 30 years) through a large scale hydrological and hydrodynamic model (MGB-IPH), after that HR products were validated against several in situ discharge gauges dispersed throughout Amazon basin, given focus in maximum and minimum events. For better HR results according performance metrics, we performed a forecast skill of HR to detect floods and droughts considering in-situ observations. Furthermore, statistical temporal series trend was performed for intensity of seasonal floods and drought in the whole Amazon basin. Results indicate that better HR represented well most past extreme events registered by in-situ observed data and also showed coherent with many events cited by literature, thus we consider viable to use some large precipitation datasets as climatic reanalysis mainly based on land surface component and datasets based in merged products for represent past regional hydrology and seasonal hydrological extreme events. On the other hand, an increase trend of intensity was realized for maximum annual discharges (related to floods) in north-western regions and for minimum annual discharges (related to drought) in central-south regions of the Amazon basin, these features were previously detected by other researches. In the whole basin, we estimated an upward trend of maximum annual discharges at Amazon River. In order to estimate better future hydrological behavior and their impacts on the society, HR could be used as a methodology to understand past extreme events occurrence in many places considering the global coverage of rainfall datasets.

AmazonFACE: Assessing the Effects of Increasing Atmospheric CO2 on the Resilience of the Amazon Forest through Integrative Model-Experiment Research

NASA Astrophysics Data System (ADS)

Lapola, D. M.

2015-12-01

The existence, magnitude and duration of a supposed "CO2 fertilization" effect in tropical forests remains largely undetermined, despite being suggested for nearly 20 years as a key knowledge gap for understanding the future resilience of Amazonian forests and its impact on the global carbon cycle. Reducing this uncertainty is critical for assessing the future of the Amazon region as well as its vulnerability to climate change. The AmazonFACE (Free-Air CO2 Enrichment) research program is an integrated model-experiment initiative of unprecedented scope in an old-growth Amazon forest near Manaus, Brazil - the first of its kind in tropical forest. The experimental treatment will simulate an atmospheric CO2 concentration [CO2] of the future in order to address the question: "How will rising atmospheric CO2 affect the resilience of the Amazon forest, the biodiversity it harbors, and the ecosystem services it provides, in light of projected climatic changes?" AmazonFACE is divided into three phases: (I) pre-experimental ecological characterization of the research site; (II) pilot experiment comprised of two 30-m diameter plots, with one treatment plot maintained at elevated [CO2] (ambient +200 ppmv), and the other control plot at ambient [CO2]; and (III) a fully-replicated long-term experiment comprised of four pairs of control/treatment FACE plots maintained for 10 years. A team of scientists from Brazil, USA, Australia and Europe will employ state-of-the-art methods to study the forest inside these plots in terms of carbon metabolism and cycling, water use, nutrient cycling, forest community composition, and interactions with environmental stressors. All project phases also encompass ecosystem-modeling activities in a way such that models provide hypothesis to be verified in the experiment, which in turn will feed models to ultimately produce more accurate projections of the environment. Resulting datasets and analyses will be a valuable resource for a broad community, especially ecosystem and climate modelers, and policy-makers.

The AmazonFACE research program: assessing the effects of increasing atmospheric CO2 on the ecology and resilience of the Amazon forest

NASA Astrophysics Data System (ADS)

Lapola, David; Quesada, Carlos; Norby, Richard; Araújo, Alessandro; Domingues, Tomas; Hartley, Iain; Kruijt, Bart; Lewin, Keith; Meir, Patrick; Ometto, Jean; Rammig, Anja

2016-04-01

The existence, magnitude and duration of a supposed "CO2 fertilization" effect in tropical forests remains largely undetermined, despite being suggested for nearly 20 years as a key knowledge gap for understanding the future resilience of Amazonian forests and its impact on the global carbon cycle. Reducing this uncertainty is critical for assessing the future of the Amazon region as well as its vulnerability to climate change. The AmazonFACE (Free-Air CO2 Enrichment) research program is an integrated model-experiment initiative of unprecedented scope in an old-growth Amazon forest near Manaus, Brazil - the first of its kind in tropical forest. The experimental treatment will simulate an atmospheric CO2 concentration [CO2] of the future in order to address the question: "How will rising atmospheric CO2 affect the resilience of the Amazon forest, the biodiversity it harbors, and the ecosystem services it provides, in light of projected climatic changes?" AmazonFACE is divided into three phases: (I) pre-experimental ecological characterization of the research site; (II) pilot experiment comprised of two 30-m diameter plots, with one treatment plot maintained at elevated [CO2] (ambient +200 ppmv), and the other control plot at ambient [CO2]; and (III) a fully-replicated long-term experiment comprised of four pairs of control/treatment FACE plots maintained for 10 years. A team of scientists from Brazil, USA, Australia and Europe will employ state-of-the-art methods to study the forest inside these plots in terms of carbon metabolism and cycling, water use, nutrient cycling, forest community composition, and interactions with environmental stressors. All project phases also encompass ecosystem-modeling activities in a way such that models provide hypothesis to be verified in the experiment, which in turn will feed models to ultimately produce more accurate projections of the environment. Resulting datasets and analyses will be a valuable resource for a broad community, especially ecosystem and climate modelers, and policy-makers.

A Comparative Analysis on the Temporal and Spatial Distribution of Fire Characteristics in the Amazon and Equatorial Southern Africa Using Observations from Space

NASA Astrophysics Data System (ADS)

Tang, Wenfu; Arellano, Avelino. F.; Raman, Aishwarya

2015-04-01

Tropical forest fires significantly impact atmospheric composition and regional and global climate. In particular, fires in Equatorial Southern Africa (ESA) and Amazon comprise the two largest contributors to fire emissions of chemically and radiatively-active atmospheric constituents (such as CO, BC, CO2) across the globe. Here, we investigate the spatiotemporal trends in fire characteristics between these regions using combustion signatures observed from space. Our main goals are: 1) To identify key relationships between the trends in co-emitted constituents across these regions, and, 2) To explore linkages of the observed trends in fire characteristics with the main drivers of change such as meteorology, fire practice, development patterns, and ecosystem feedbacks. We take advantage of the similarity in latitude and land area between these regions in understanding some of these drivers. Our approach begins with a multi-species analysis of trends in the observed abundance of CO, NO2, and aerosols over these regions and across the time period 2004 to 2014. We use multi-spectral retrievals of CO from Measurements Of Pollution In The Troposphere (MOPITT), tropospheric column retrievals of NO2 from Ozone Monitoring Instrument (OMI), and aerosol optical depth retrievals from Moderate Resolution Imaging Spectroradiometer (MODIS) instrument. The long records from these retrievals provide a unique opportunity to study atmospheric composition across the most recent decade. While several studies in the past have reported trends over these regions, most of these studies have focused on a particular constituent. A unique aspect of this work involves understanding covariations in co-emitted constituents to provide a more comprehensive look at fire characteristics and behavior, which are yet to be fully understood. Our initial results show that the annual average of CO for ESA (~115 ppbv) is greater than that of Amazon (110 ppbv). This pattern is also seen in NO2 (ESA : ~215 pptv ; Amazon : ~155 pptv). The standard deviation of CO is higher in Amazon (50 ppbv) when compared to ESA (35 ppbv) whereas NO2 shows similar standard deviation in Amazon and ESA (70-90 pptv). We also find changes in the timing patterns of the large fire events across these regions. Since this has important implications to changes in fire behavior (smoldering and flaming phase), we also investigated retrievals of fire radiative power (FRP) from MODIS and information on land cover change and deforestation. We find FRP patterns consistent with our results. Finally, we will explore other measurements available during this period (aircraft field campaigns and in-situ observations) and compare with current fire emission models, such as the Global Fire Emission Database (GFED) to test the robustness of our findings. We note that this exploratory work provides a unique perspective of fire characteristics that will be useful to improve predictive capability of fire emission and atmospheric models for the Amazon and ESA.

Measurement of deforestation in the Brazilian Amazon using satellite remote sensing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skole, D.L.

1992-01-01

Understanding of the role of the biota in the global carbon cycle is limited by an absence of accurate measurements of deforestation rates in the tropics. This study measures the rate and extent of deforestation in the Brazilian Amazon, the largest extant tropical forest biome in the world. The study uses remote sensing measurements of deforestation rates, the area of secondary vegetation, and tabular data to document deforestation. The analysis concludes: (1) AVHRR will greatly overestimate deforestation and be highly variable; the use of a brightness temperature threshold is highly sensitive and unreliable. The upward bias of AVHRR is amore » function of the density of deforestation. (2) Accurate measurement of deforestation requires Landsat TM data, and can be accomplished using low cost visual interpretation of photographic products at 1:250,000 scales. (3) Secondary growth in the Brazilian Amazon represents a large fraction of the total deforested area, and the abandonment of agricultural land is an important land cover transition. Abandonment rates were 70--83% of clearing rates from primary forests. At any one point in time, approximately 30% of the deforested area is in some stage of abandonment, and quite likely nearly all deforested land becomes abandoned after approximately 5 years. (4) Previous estimates of the total area deforested in the Amazon, as well as deforestation rates, have been too high by as much as 4-fold. A complete assessment of the entire Legal Amazon using over 200 Landsat images measures 251 [times] 10[sup 3] km[sup 2] deforestation as of 1988, or approximately 6% of the closed forests of the region. The average annual rate of deforestation between 1978 and 1988 was 18 [times] 10[sup 3] km[sup 2] yr[sup [minus]1]. These findings suggest the estimates of carbon emissions from the Amazon for the late 1980s have been too high, since the area of regrowth is large and rates of deforestation are lower than previously believed.« less

Vivid valleys, pallid peaks? Hypsometric variations and rural–urban land change in the Central Peruvian Andes

PubMed Central

Haller, Andreas

2012-01-01

What happens to the land cover within the hinterland's altitudinal belts while Central Andean cities are undergoing globalization and urban restructuring? What conclusions can be drawn about changes in human land use? By incorporating a regional altitudinal zonation model, direct field observations and GIS analyses of remotely sensed long term data, the present study examines these questions using the example of Huancayo Metropolitano – an emerging Peruvian mountain city of 420,000 inhabitants, situated at 3260 m asl in the Mantaro Valley. The study's results indicate that rapid urban growth during the late 1980s and early 1990s was followed by the agricultural intensification and peri-urban condominization at the valley floor (quechua) – since the beginning of Peru's neoliberal era. Moreover, regarding the adjoining steep slopes (suni) and subsequent grassland ecosystems (puna), the research output presents land cover change trajectories that clearly show an expansion of human land use, such as reforestation for wood production and range burning for livestock grazing, even at high altitudes – despite rural–urban migration trends and contrary to several results of extra-Andean studies. Consequently, rural–urban planners and policy makers are challenged to focus on the manifold impacts of globalization on human land use – at all altitudinal belts of the Andean city's hinterland: toward sustainable mountain development that bridges the social and physical gaps – from the bottom up. PMID:23564987

A Paleoecological View of the Anthropocene in Tropical South America

NASA Astrophysics Data System (ADS)

Bush, M. B.; McMichael, C. H.; Piperno, D. R.

2015-12-01

Many potential events could define the onset of the Anthropocene in the Neotropics. The first effects caused by humans included the final extinction of megafauna around 10,000 years ago, and changes in fire frequency, particularly after about 8000 years ago. The first agriculture (squash) is evident in northwestern regions at 9000 BP, and in the Amazon Basin maize is cultivated by 6300 BP. But these events have not been widely documented on the continent and if some chronological uniformity is sought as a guide to defining the onset of the Anthropocene, they would fail that test. Coming forward through time, increasing societal complexity is evident beginning about 3000 BP in both the Amazon and the Andes, but again the development was patchy. Some archaeologists are arguing that between c. 2000 BP and 500 BP the Amazon Basin became a manufactured landscape. While major river corridors were very likely influenced by human populations, the level of use in the great interfluvial areas (c. 90% of Amazonia) remains a matter of debate. The empirical data that exist for human presence in these areas point to sparse occupation, both in space and time, and the assertion that most of prehistoric Amazonia was manipulated by humans is unsupported. Following European contact, indigenous populations were reduced probably 90-95% within 200 years, which interrupted the cultural trajectory of the Neotropics. The next possible contender for the local onset of the Anthropocene was the Rubber Boom (1879-1912). The Rubber Boom greatly increased human populations along many of the Amazon's major rivers and tributaries. Hunting and deforestation picked up pace, and the growing presence of steamships allowed exportation of a wide range of Amazonian products beyond rubber, e.g. plumes, timber, and turtle oil. In addition to these local effects, the global effects that came with increased fossil fuel use and industrialization, would also have influenced all of South America. Even so, the influence of the Rubber Boom would have been strongest in the Amazon Basin and far milder in the Andes or along the Pacific coastline. In the 1950s-1970s the green revolutions and fossil-fuel based agriculture caused an increase in global NOx. Increased NOx deposition and the appearance of plastics may be defining markers of the Anthropocene in South America.

GoAmazon2014/5 campaign points to deep-inflow approach to deep convection across scales

DOE PAGES

Schiro, Kathleen A.; Ahmed, Fiaz; Giangrande, Scott E.; ...

2018-04-17

Representations of strongly precipitating deep-convective systems in climate models are among the most important factors in their simulation. Parameterizations of these motions face the dual challenge of unclear pathways to including mesoscale organization and high sensitivity of convection to approximations of turbulent entrainment of environmental air. Ill-constrained entrainment processes can even affect global average climate sensitivity under global warming. Multiinstrument observations from the Department of Energy GoAmazon2014/5 field campaign suggest that an alternative formulation from radar-derived dominant updraft structure yields a strong relationship of precipitation to buoyancy in both mesoscale and smaller-scale convective systems. This simultaneously provides a key stepmore » toward representing the influence of mesoscale convection in climate models and sidesteps a problematic dependence on traditional entrainment rates. A substantial fraction of precipitation is associated with mesoscale convective systems (MCSs), which are currently poorly represented in climate models. Convective parameterizations are highly sensitive to the assumptions of an entraining plume model, in which high equivalent potential temperature air from the boundary layer is modified via turbulent entrainment. Here we show, using multiinstrument evidence from the Green Ocean Amazon field campaign (2014–2015; GoAmazon2014/5), that an empirically constrained weighting for inflow of environmental air based on radar wind profiler estimates of vertical velocity and mass flux yields a strong relationship between resulting buoyancy measures and precipitation statistics. This deep-inflow weighting has no free parameter for entrainment in the conventional sense, but to a leading approximation is simply a statement of the geometry of the inflow. The structure further suggests the weighting could consistently apply even for coherent inflow structures noted in field campaign studies for MCSs over tropical oceans. For radar precipitation retrievals averaged over climate model grid scales at the GoAmazon2014/5 site, the use of deep-inflow mixing yields a sharp increase in the probability and magnitude of precipitation with increasing buoyancy. Furthermore, this applies for both mesoscale and smaller-scale convection. Results from reanalysis and satellite data show that this holds more generally: Deep-inflow mixing yields a strong precipitation–buoyancy relation across the tropics. Lastly, deep-inflow mixing may thus circumvent inadequacies of current parameterizations while helping to bridge the gap toward representing mesoscale convection in climate models.« less

GoAmazon2014/5 campaign points to deep-inflow approach to deep convection across scales

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schiro, Kathleen A.; Ahmed, Fiaz; Giangrande, Scott E.

Representations of strongly precipitating deep-convective systems in climate models are among the most important factors in their simulation. Parameterizations of these motions face the dual challenge of unclear pathways to including mesoscale organization and high sensitivity of convection to approximations of turbulent entrainment of environmental air. Ill-constrained entrainment processes can even affect global average climate sensitivity under global warming. Multiinstrument observations from the Department of Energy GoAmazon2014/5 field campaign suggest that an alternative formulation from radar-derived dominant updraft structure yields a strong relationship of precipitation to buoyancy in both mesoscale and smaller-scale convective systems. This simultaneously provides a key stepmore » toward representing the influence of mesoscale convection in climate models and sidesteps a problematic dependence on traditional entrainment rates. A substantial fraction of precipitation is associated with mesoscale convective systems (MCSs), which are currently poorly represented in climate models. Convective parameterizations are highly sensitive to the assumptions of an entraining plume model, in which high equivalent potential temperature air from the boundary layer is modified via turbulent entrainment. Here we show, using multiinstrument evidence from the Green Ocean Amazon field campaign (2014–2015; GoAmazon2014/5), that an empirically constrained weighting for inflow of environmental air based on radar wind profiler estimates of vertical velocity and mass flux yields a strong relationship between resulting buoyancy measures and precipitation statistics. This deep-inflow weighting has no free parameter for entrainment in the conventional sense, but to a leading approximation is simply a statement of the geometry of the inflow. The structure further suggests the weighting could consistently apply even for coherent inflow structures noted in field campaign studies for MCSs over tropical oceans. For radar precipitation retrievals averaged over climate model grid scales at the GoAmazon2014/5 site, the use of deep-inflow mixing yields a sharp increase in the probability and magnitude of precipitation with increasing buoyancy. Furthermore, this applies for both mesoscale and smaller-scale convection. Results from reanalysis and satellite data show that this holds more generally: Deep-inflow mixing yields a strong precipitation–buoyancy relation across the tropics. Lastly, deep-inflow mixing may thus circumvent inadequacies of current parameterizations while helping to bridge the gap toward representing mesoscale convection in climate models.« less

Beyond Population and Environment: Household Life Cycle Demography and Land Use Allocation among Small Farm Colonists in the Amazon

NASA Technical Reports Server (NTRS)

Perz, Stephen G.; Walker, Robert T.; Caldas, Marcellus M.

2006-01-01

Most research featuring demographic factors in environmental change has focused on processes operating at the level of national or global populations. This paper focuses on household-level demographic life cycles among colonists in the Amazon, and evaluates the impacts on land use allocation. The analysis goes beyond prior research by including a broader suite of demographic variables, and by simultaneously assessing their impacts on multiple land uses with different economic and ecological implications. We estimate a system of structural equations that accounts for endogeneity among land uses, and the findings indicate stronger demographic effects than previous work. These findings bear implications for modeling land use, and the place of demography in environmental research.

Physical and human dimensions of deforestation in Amazonia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Skole, D.L.; Chomentowski, W.H.; Salas W.A.

1994-05-01

In the Brazilian Amazon, regional trends are influenced by large scale external forces but mediated by local conditions. Tropical deforestation has a large influence on global hydrology, climate and biogeochemical cycles, but understanding is inadequate because of a lack of accurate measurements of rate, geographic extent and spatial patterns and lack of insight into its causes including interrelated social, economic and environmental factors. This article proposes an interdisciplinary approach for analyzing tropical deforestation in the Brazilian Amazon. The first part shows how deforestation can be measured from satellite remote sensing and sociodemographic and economic data. The second part proposes anmore » explanatory model, considering the relationship among deforestation and large scale social, economic, and institutional factors. 43 refs., 8 figs.« less

Globalization of the Amazon soy and beef industries: opportunities for conservation.

PubMed

Nepstad, Daniel C; Stickler, Claudia M; Almeida, Oriana T

2006-12-01

Amazon beef and soybean industries, the primary drivers of Amazon deforestation, are increasingly responsive to economic signals emanating from around the world, such as those associated with bovine spongiform encephalopathy (BSE, "mad cow disease") outbreaks and China's economic growth. The expanding role of these economic "teleconnections" (coupled phenomena that take place in distant places on the planet) led to a 3-year period (2002-2004) of historically high deforestation rates. But it also increases the potential for large-scale conservation in the region as markets and finance institutions demand better environmental and social performance of beef and soy producers. Cattle ranchers and soy farmers who have generally opposed ambitious government regulations that require forest reserves on private property are realizing that good land stewardship-including compliance with legislation-may increase their access to expanding domestic and international markets and to credit and lower the risk of "losing" their land to agrarian reform. The realization of this potential depends on the successful negotiation of social and environmental performance criteria and an associated system of certification that are acceptable to both the industries and civil society. The foot-and-mouth eradication system, in which geographic zones win permission to export beef, may provide an important model for the design of a low-cost, peer-enforced, socioenvironmental certification system that becomes the mechanism by which beef and soy industries gain access to markets outside the Amazon.

Land-Cover and Land-Use Change in the Brazilian Amazon: Smallholders, Ranchers and Frontier Stratification

NASA Technical Reports Server (NTRS)

Aldrich, Stephen P.; Walker, Robert T.; Arima, Eugenio Y.; Caldas, Marcellus M.; Browder, John O.; Perz, Stephen

2006-01-01

Tropical deforestation is a significant driver of global environmental change, given its impacts on the carbon cycle and biodiversity. Loss of the Amazon forest, the focus of this article, is of particular concern because of the size and the rapid rate at which the forest is being converted to agricultural use. In this article, we identify what has been the most important driver of deforestation in a specific colonization frontier in the Brazilian Amazon. To this end, we consider (1) the land-use dynamics of smallholder households, (2) the formation of pasture by large-scale ranchers, and (3) structural processes of land aggregation by ranchers. Much has been written about relations between smallholders and ranchers in the Brazilian Amazon, particularly those involving conflict over land, and this article explicates the implications of such social processes for land cover. Toward this end, we draw on panel data (1996-2002) and satellite imagery (1986-1999) to show the deforestation that is attributable to small- and largeholders, and the deforestation that is attributable to aggregations of property arising from a process that we refer to as frontier stratification. Evidently, most of the recent deforestation in the study area has resulted from the household processes of smallholders, not from conversions to pasture pursuant to the appropriations of smallholders' property by well-capitalized ranchers or speculators.

Maximizing Amazonia's Ecosystem Services: Juggling the potential for carbon storage, agricultural yield and biodiversity in the Amazon

NASA Astrophysics Data System (ADS)

O'Connell, C. S.; Foley, J. A.; Gerber, J. S.; Polasky, S.

2011-12-01

The Amazon is not only an exceptionally biodiverse and carbon-rich tract of tropical forest, it is also a case study in land use change. Over the next forty years it will continue to experience pressure from an urbanizing and increasingly affluent populace: under a business-as-usual scenario, global cropland, pasture and biofuels systems will carry on expanding, while the Amazon's carbon storage potential will likely become another viable revenue source under REDD+. Balancing those competing land use pressures ought also take into account Amazonia's high - but heterogeneous - biodiversity. Knowing where Amazonia has opportunities to make efficient or optimal trade offs between carbon storage, agricultural production and biodiversity can allow policymakers to direct or influence LUC drivers. This analysis uses a spatially-explicit model that takes climate and management into account to quantify the potential agricultural yield of both the Amazon's most important agricultural commodities - sugar, soy and maize - as well as several that are going to come into increasing prominence, including palm oil. In addition, it maps the potential for carbon to be stored in forest biomass and relative species richness across Amazonia. We then compare carbon storage, agricultural yield and species richness and identify areas where efficient trade offs occur between food, carbon, and biodiversity - three critical ecosystem goods and services provided by the world's largest tropical forest.

A database for the monitoring of thermal anomalies over the Amazon forest and adjacent intertropical oceans

PubMed Central

Jiménez-Muñoz, Juan C.; Mattar, Cristian; Sobrino, José A.; Malhi, Yadvinder

2015-01-01

Advances in information technologies and accessibility to climate and satellite data in recent years have favored the development of web-based tools with user-friendly interfaces in order to facilitate the dissemination of geo/biophysical products. These products are useful for the analysis of the impact of global warming over different biomes. In particular, the study of the Amazon forest responses to drought have recently received attention by the scientific community due to the occurrence of two extreme droughts and sustained warming over the last decade. Thermal Amazoni@ is a web-based platform for the visualization and download of surface thermal anomalies products over the Amazon forest and adjacent intertropical oceans using Google Earth as a baseline graphical interface (http://ipl.uv.es/thamazon/web). This platform is currently operational at the servers of the University of Valencia (Spain), and it includes both satellite (MODIS) and climatic (ERA-Interim) datasets. Thermal Amazoni@ is composed of the viewer system and the web and ftp sites with ancillary information and access to product download. PMID:26029379

Divergent biophysical controls of aquatic CO2 and CH4 in the World's two largest rivers.

PubMed

Borges, Alberto V; Abril, Gwenaël; Darchambeau, François; Teodoru, Cristian R; Deborde, Jonathan; Vidal, Luciana O; Lambert, Thibault; Bouillon, Steven

2015-10-23

Carbon emissions to the atmosphere from inland waters are globally significant and mainly occur at tropical latitudes. However, processes controlling the intensity of CO2 and CH4 emissions from tropical inland waters remain poorly understood. Here, we report a data-set of concurrent measurements of the partial pressure of CO2 (pCO2) and dissolved CH4 concentrations in the Amazon (n = 136) and the Congo (n = 280) Rivers. The pCO2 values in the Amazon mainstem were significantly higher than in the Congo, contrasting with CH4 concentrations that were higher in the Congo than in the Amazon. Large-scale patterns in pCO2 across different lowland tropical basins can be apprehended with a relatively simple statistical model related to the extent of wetlands within the basin, showing that, in addition to non-flooded vegetation, wetlands also contribute to CO2 in river channels. On the other hand, dynamics of dissolved CH4 in river channels are less straightforward to predict, and are related to the way hydrology modulates the connectivity between wetlands and river channels.

A database for the monitoring of thermal anomalies over the Amazon forest and adjacent intertropical oceans.

PubMed

Jiménez-Muñoz, Juan C; Mattar, Cristian; Sobrino, José A; Malhi, Yadvinder

2015-01-01

Advances in information technologies and accessibility to climate and satellite data in recent years have favored the development of web-based tools with user-friendly interfaces in order to facilitate the dissemination of geo/biophysical products. These products are useful for the analysis of the impact of global warming over different biomes. In particular, the study of the Amazon forest responses to drought have recently received attention by the scientific community due to the occurrence of two extreme droughts and sustained warming over the last decade. Thermal Amazoni@ is a web-based platform for the visualization and download of surface thermal anomalies products over the Amazon forest and adjacent intertropical oceans using Google Earth as a baseline graphical interface (http://ipl.uv.es/thamazon/web). This platform is currently operational at the servers of the University of Valencia (Spain), and it includes both satellite (MODIS) and climatic (ERA-Interim) datasets. Thermal Amazoni@ is composed of the viewer system and the web and ftp sites with ancillary information and access to product download.

The Genetic History of Indigenous Populations of the Peruvian and Bolivian Altiplano: The Legacy of the Uros

PubMed Central

Sandoval, José Raul; Lacerda, Daniela R.; Jota, Marilza S. A.; Salazar-Granara, Alberto; Vieira, Pedro Paulo R.; Acosta, Oscar; Cuellar, Cinthia; Revollo, Susana; Fujita, Ricardo; Santos, Fabrício R.

2013-01-01

The Altiplano region of the South American Andes is marked by an inhospitable climate to which the autochthonous human populations adapted and then developed great ancient civilizations, such as the Tiwanaku culture and the Inca Empire. Since pre-Columbian times, different rulers established themselves around the Titicaca and Poopo Lakes. By the time of the arrival of Spaniards, Aymara and Quechua languages were predominant on the Altiplano under the rule of the Incas, although the occurrence of other spoken languages, such as Puquina and Uruquilla, suggests the existence of different ethnic groups in this region. In this study, we focused on the pre-Columbian history of the autochthonous Altiplano populations, particularly the Uros ethnic group, which claims to directly descend from the first settlers of the Andes, and some linguists suggest they might otherwise be related to Arawak speaking groups from the Amazon. Using phylogeographic, population structure and spatial genetic analyses of Y-chromosome and mtDNA data, we inferred the genetic relationships among Uros populations (Los Uros from Peru, Uru-Chipaya and Uru-Poopo from Bolivia), and compared their haplotype profiles with eight Aymara, nine Quechua and two Arawak (Machiguenga and Yanesha) speaking populations from Peru and Bolivia. Our results indicated that Uros populations stand out among the Altiplano populations, while appearing more closely related to the Aymara and Quechua from Lake Titicaca and surrounding regions than to the Amazon Arawaks. Moreover, the Uros populations from Peru and Bolivia are genetically differentiated from each other, indicating a high heterogeneity in this ethnic group. Finally, our results support the distinctive ancestry for the Uros populations of Peru and Bolivia, which are likely derived from ancient Andean lineages that were partially replaced during more recent farming expansion events and the establishment of complex civilizations in the Andes. PMID:24039843

The genetic history of indigenous populations of the Peruvian and Bolivian Altiplano: the legacy of the Uros.

PubMed

Sandoval, José Raul; Lacerda, Daniela R; Jota, Marilza S A; Salazar-Granara, Alberto; Vieira, Pedro Paulo R; Acosta, Oscar; Cuellar, Cinthia; Revollo, Susana; Fujita, Ricardo; Santos, Fabrício R

2013-01-01

The Altiplano region of the South American Andes is marked by an inhospitable climate to which the autochthonous human populations adapted and then developed great ancient civilizations, such as the Tiwanaku culture and the Inca Empire. Since pre-Columbian times, different rulers established themselves around the Titicaca and Poopo Lakes. By the time of the arrival of Spaniards, Aymara and Quechua languages were predominant on the Altiplano under the rule of the Incas, although the occurrence of other spoken languages, such as Puquina and Uruquilla, suggests the existence of different ethnic groups in this region. In this study, we focused on the pre-Columbian history of the autochthonous Altiplano populations, particularly the Uros ethnic group, which claims to directly descend from the first settlers of the Andes, and some linguists suggest they might otherwise be related to Arawak speaking groups from the Amazon. Using phylogeographic, population structure and spatial genetic analyses of Y-chromosome and mtDNA data, we inferred the genetic relationships among Uros populations (Los Uros from Peru, Uru-Chipaya and Uru-Poopo from Bolivia), and compared their haplotype profiles with eight Aymara, nine Quechua and two Arawak (Machiguenga and Yanesha) speaking populations from Peru and Bolivia. Our results indicated that Uros populations stand out among the Altiplano populations, while appearing more closely related to the Aymara and Quechua from Lake Titicaca and surrounding regions than to the Amazon Arawaks. Moreover, the Uros populations from Peru and Bolivia are genetically differentiated from each other, indicating a high heterogeneity in this ethnic group. Finally, our results support the distinctive ancestry for the Uros populations of Peru and Bolivia, which are likely derived from ancient Andean lineages that were partially replaced during more recent farming expansion events and the establishment of complex civilizations in the Andes.

Mapping Palm Swamp Wetland Ecosystems in the Peruvian Amazon: a Multi-Sensor Remote Sensing Approach

NASA Astrophysics Data System (ADS)

Podest, E.; McDonald, K. C.; Schroeder, R.; Pinto, N.; Zimmerman, R.; Horna, V.

2012-12-01

Wetland ecosystems are prevalent in the Amazon basin, especially in northern Peru. Of specific interest are palm swamp wetlands because they are characterized by constant surface inundation and moderate seasonal water level variation. This combination of constantly saturated soils and warm temperatures year-round can lead to considerable methane release to the atmosphere. Because of the widespread occurrence and expected sensitivity of these ecosystems to climate change, it is critical to develop methods to quantify their spatial extent and inundation state in order to assess their carbon dynamics. Spatio-temporal information on palm swamps is difficult to gather because of their remoteness and difficult accessibility. Spaceborne microwave remote sensing is an effective tool for characterizing these ecosystems since it is sensitive to surface water and vegetation structure and allows monitoring large inaccessible areas on a temporal basis regardless of atmospheric conditions or solar illumination. We developed a remote sensing methodology using multi-sensor remote sensing data from the Advanced Land Observing Satellite (ALOS) Phased Array L-Band Synthetic Aperture Radar (PALSAR), Shuttle Radar Topography Mission (SRTM) DEM, and Landsat to derive maps at 100 meter resolution of palm swamp extent and inundation based on ground data collections; and combined active and passive microwave data from AMSR-E and QuikSCAT to derive inundation extent at 25 kilometer resolution on a weekly basis. We then compared information content and accuracy of the coarse resolution products relative to the high-resolution datasets. The synergistic combination of high and low resolution datasets allowed for characterization of palm swamps and assessment of their flooding status. This work has been undertaken partly within the framework of the JAXA ALOS Kyoto & Carbon Initiative. PALSAR data have been provided by JAXA. Portions of this work were carried out at the Jet Propulsion Laboratory, California Institute of Technology, under contract with the National Aeronautics and Space Administration.

Estimation of erosion and sedimentation yield in the Ucayali river basin, a Peruvian tributary of the Amazon River, using ground and satellite methods

NASA Astrophysics Data System (ADS)

Santini, William; Martinez, Jean-Michel; Guyot, Jean-Loup; Espinoza, Raul; Vauchel, Philippe; Lavado, Waldo

2014-05-01

Since 2003, the works of HYBAM observatory (www.ore-hybam.org) has allowed to quantify with accuracy, precision and over a long period Amazon's main rivers discharges and sediments loads. In Peru, a network of 8 stations is regularly gauged and managed in association with the national meteorological and Hydrological service (SENAMHI), the UNALM (National Agrological University of La Molina) and the National Water Agency (ANA). Nevertheless, some current processes of erosion and sedimentation in the foreland basins are still little known, both in volumes and in localization. The sedimentary contributions of Andean tributaries could be there considerable, masking a very strong sedimentation in subsidence zones localized between the control points of the HYBAM's network. The development of spatial techniques such as the Altimetry and reflectance measurement allows us today to complete the ground's network: HYBAM's works have allowed establishing a relation between surface concentration and reflectance in Amazonian rivers (Martinez et al., 2009, Espinoza et al., 2012) and reconstituting water levels series (Calmant et al., 2006, 2008). If the difficulty of calibration of these techniques increases towards the upstream, their use can allow a first characterization of the tributaries contributions and sedimentation zones. At world level, erosion and sedimentation yields in the upper Ucayali are exceptional, favored by a marked seasonality in this region (Espinoza et al., 2009, Lavado, 2010, Pépin et al., 2010) and the presence of cells of extreme precipitation ("Hotspots") (Johnson et al., 1976, Espinoza et al, 2009a). The upper Ucayali drainage basin is a Piggyback where the River run with a low slope, parallel to the Andean range, deposing by gravity hundred millions a year of sands, silts and clays. In this work, we thus propose an estimation of sedimentation and erosion yield in the Ucayali river basin using ground and satellite methods.

Preventing malaria in the Peruvian Amazon: a qualitative study in Iquitos, Peru.

PubMed

Newell, Ian; Wiskin, Connie; Anthoney, James; Meza, Graciela; de Wildt, Gilles

2018-01-16

In Peru, despite decades of concerted control efforts, malaria remains a significant public health burden. Peru has recently exhibited a dramatic rise in malaria incidence, impeding South America's progress towards malaria elimination. The Amazon basin, in particular the Loreto region of Peru, has been identified as a target for the implementation of intensified control strategies, aiming for elimination. No research has addressed why vector control strategies in Loreto have had limited impact in the past, despite vector control elsewhere being highly effective in reducing malaria transmission. This study employed qualitative methods to explore factors limiting the success of vector control strategies in the region. Twenty semi-structured interviews were conducted among adults attending a primary care centre in Iquitos, Peru, together with 3 interviews with key informants (health care professionals). The interviews focussed on how local knowledge, together with social and cultural attitudes, determined the use of vector control methods. Five themes emerged. (a) Participants believed malaria to be embedded within their culture, and commonly blamed this for a lack of regard for prevention. (b) They perceived a shift in mosquito biting times to early evening, rendering night-time use of bed nets less effective. (c) Poor preventive practices were compounded by a consensus that malaria prevention was the government's responsibility, and that this reduced motivation for personal prevention. (d) Participants confused the purpose of space-spraying. (e) Participants' responses also exposed persisting misconceptions, mainly concerning the cause of malaria and best practices for its prevention. To eliminate malaria from the Americas, region-specific strategies need to be developed that take into account the local social and cultural contexts. In Loreto, further research is needed to explore the potential shift in biting behaviour of Anopheles darlingi, and how this interacts with the population's social behaviours and current use of preventive measures. Attitudes concerning personal responsibility for malaria prevention and long-standing misconceptions as to the cause of malaria and best preventive practices also need to be addressed.

Developing Plasmodium vivax Resources for Liver Stage Study in the Peruvian Amazon Region.

PubMed

Orjuela-Sanchez, Pamela; Villa, Zaira Hellen; Moreno, Marta; Tong-Rios, Carlos; Meister, Stephan; LaMonte, Gregory M; Campo, Brice; Vinetz, Joseph M; Winzeler, Elizabeth A

2018-04-13

To develop new drugs and vaccines for malaria elimination, it will be necessary to discover biological interventions, including small molecules that act against Plasmodium vivax exoerythrocytic forms. However, a robust in vitro culture system for P. vivax is still lacking. Thus, to study exoerythrocytic forms, researchers must have simultaneous access to fresh, temperature-controlled patient blood samples, as well as an anopheline mosquito colony. In addition, researchers must rely on native mosquito species to avoid introducing a potentially dangerous invasive species into a malaria-endemic region. Here, we report an in vitro culture system carried out on site in a malaria-endemic region for liver stage parasites of P. vivax sporozoites obtained from An. darlingi, the main malaria vector in the Americas. P. vivax sporozoites were obtained by dissection of salivary glands from infected An. darlingi mosquitoes and purified by Accudenz density gradient centrifugation. HC04 liver cells were exposed to P. vivax sporozoites and cultured up to 9 days. To overcome low P. vivax patient parasitemias, potentially lower mosquito vectorial capacity, and humid, nonsterile environmental conditions, a new antibiotic cocktail was included in tissue culture to prevent contamination. Culturing conditions supported exoerythrocytic (EEF) P. vivax liver stage growth up to 9 days and allowed for maturation into intrahepatocyte merosomes. Some of the identified small forms were resistant to atovaquone (1 μM) but sensitive to the phosphatidylinositol 4-kinase inhibitor, KDU691 (1 μM). This study reports a field-accessible EEF production process for drug discovery in a malaria-endemic site in which viable P. vivax sporozoites are used for drug studies using hepatocyte infection. Our data demonstrate that the development of meaningful, field-based resources for P. vivax liver stage drug screening and liver stage human malaria experimentation in the Amazon region is feasible.

Prolonged extension and subsidence of the Peruvian forearc during the Cenozoic

NASA Astrophysics Data System (ADS)

Viveen, Willem; Schlunegger, Fritz

2018-04-01

Ocean-continental subduction zones are commonly associated with compressional stress fields, which ultimately result in regional uplift of the overriding plate. This has particularly been inferred by most studies for the western margin of the Peruvian Andes. However, local geological observations have contested this idea. Here, we present a review of existing local and international literature supplemented by new structural and geomorphic observations that suggest that nearly the entire central (15° to 11° S latitude) and northern Peruvian forearc (11° to 6° S latitude) are under extension with a slight tendency to transtension instead of compression, and that this region has experienced a prolonged period of subsidence since the middle-late Eocene, interrupted by short pulses of uplift. In contrast, the southern Peruvian forearc (15° to 18° S latitude) has experienced (trans)tension from the middle-late Eocene until recent in combination with uplift. The central and southern Peruvian forearc that was influenced by the passage of the Nazca ridge experienced transtension and subsidence until the middle-late Miocene and alternating phases of compressional and transtensional tectonics afterwards. These new findings on the geodynamic development of the Peruvian forearc need to be considered in future reconstructions of the mechanisms at work within this subduction zone.

Abrupt Increases in Amazonian Tree Mortality Due to Drought-Fire Interactions

NASA Technical Reports Server (NTRS)

Brando, Paulo Monteiro; Balch, Jennifer K.; Nepstad, Daniel C.; Morton, Douglas C.; Putz, Francis E.; Coe, Michael T.; Silverio, Divino; Macedo, Marcia N.; Davidson, Eric A.; Nobrega, Caroline C.;

Abrupt increases in Amazonian tree mortality due to drought-fire interactions.

PubMed

Brando, Paulo Monteiro; Balch, Jennifer K; Nepstad, Daniel C; Morton, Douglas C; Putz, Francis E; Coe, Michael T; Silvério, Divino; Macedo, Marcia N; Davidson, Eric A; Nóbrega, Caroline C; Alencar, Ane; Soares-Filho, Britaldo S

2014-04-29

Interactions between climate and land-use change may drive widespread degradation of Amazonian forests. High-intensity fires associated with extreme weather events could accelerate this degradation by abruptly increasing tree mortality, but this process remains poorly understood. Here we present, to our knowledge, the first field-based evidence of a tipping point in Amazon forests due to altered fire regimes. Based on results of a large-scale, long-term experiment with annual and triennial burn regimes (B1yr and B3yr, respectively) in the Amazon, we found abrupt increases in fire-induced tree mortality (226 and 462%) during a severe drought event, when fuel loads and air temperatures were substantially higher and relative humidity was lower than long-term averages. This threshold mortality response had a cascading effect, causing sharp declines in canopy cover (23 and 31%) and aboveground live biomass (12 and 30%) and favoring widespread invasion by flammable grasses across the forest edge area (80 and 63%), where fires were most intense (e.g., 220 and 820 kW ⋅ m(-1)). During the droughts of 2007 and 2010, regional forest fires burned 12 and 5% of southeastern Amazon forests, respectively, compared with <1% in nondrought years. These results show that a few extreme drought events, coupled with forest fragmentation and anthropogenic ignition sources, are already causing widespread fire-induced tree mortality and forest degradation across southeastern Amazon forests. Future projections of vegetation responses to climate change across drier portions of the Amazon require more than simulation of global climate forcing alone and must also include interactions of extreme weather events, fire, and land-use change.

Evapotranspiration estimation using a parameter-parsimonious energy partition model over Amazon basin

NASA Astrophysics Data System (ADS)

Xu, D.; Agee, E.; Wang, J.; Ivanov, V. Y.

2017-12-01

The increased frequency and severity of droughts in the Amazon region have emphasized the potential vulnerability of the rainforests to heat and drought-induced stresses, highlighting the need to reduce the uncertainty in estimates of regional evapotranspiration (ET) and quantify resilience of the forest. Ground-based observations for estimating ET are resource intensive, making methods based on remotely sensed observations an attractive alternative. Several methodologies have been developed to estimate ET from satellite data, but challenges remained in model parameterization and satellite limited coverage reducing their utility for monitoring biodiverse regions. In this work, we apply a novel surface energy partition method (Maximum Entropy Production; MEP) based on Bayesian probability theory and nonequilibrium thermodynamics to derive ET time series using satellite data for Amazon basin. For a large, sparsely monitored region such as the Amazon, this approach has the advantage methods of only using single level measurements of net radiation, temperature, and specific humidity data. Furthermore, it is not sensitive to the uncertainty of the input data and model parameters. In this first application of MEP theory for a tropical forest biome, we assess its performance at various spatiotemporal scales against a diverse field data sets. Specifically, the objective of this work is to test this method using eddy flux data for several locations across the Amazonia at sub-daily, monthly, and annual scales and compare the new estimates with those using traditional methods. Analyses of the derived ET time series will contribute to reducing the current knowledge gap surrounding the much debated response of the Amazon Basin region to droughts and offer a template for monitoring the long-term changes in global hydrologic cycle due to anthropogenic and natural causes.

Impact of Anthropogenic Emissions on Isoprene Photochemical Oxidation Pathways in Central Amazonia

NASA Astrophysics Data System (ADS)

Thayer, M. P.; Dorris, M. R.; Keutsch, F. N.; Goldstein, A. H.; Guenther, A. B.; Isaacman-VanWertz, G. A.; Jimenez, J. L.; Kim, S.; Liu, Y.; Martin, S. T.; Palm, B. B.; Park, J. H.; Seco, R.; Sjostedt, S. J.; Springston, S. R.; Wernis, R. A.; Yee, L.

2016-12-01

The atmosphere over the Amazon rainforest is characterized by high concentrations of biogenic volatile organic compounds (BVOCs) - most notably isoprene, which is the most abundant non-methane VOC both locally and globally. These BVOCs are photochemically oxidized, forming oVOCs, especially via reaction with the hydroxyl radical (OH). This photochemical processing can result in formation of secondary pollutants such as ozone (O3) and secondary organic aerosol (SOA). During the Green Ocean Amazon campaign (GoAmazon2014/5), we obtained formaldehyde and glyoxal measurements together with OH, peroxy radicals (RO2+HO2), nitrogen oxides (NOx), CO, CO2, O3, (o)VOCs, and aerosol particle size distribution. Here we present data collected during 2014 at the T3 field site, 60 km to the west of Manaus, Brazil (3°12'47.82"S, 60°35'55.32"W). The T3 GoAmazon site varies between sampling strictly pristine (biogenic) emissions and influence from anthropogenic emissions from Manaus, depending on meteorological conditions. The day-to-day oscillation provides an ideal setting for evaluating the impact of pollution from biomass burning and urban emissions on VOC oxidation and resultant secondary pollutant production. Anthropogenic plumes contain not only additional VOC precursors, but also enhanced NOx, which drastically alters the relative importance of various isoprene oxidation pathways. We utilize a 0-D photochemical box model to examine how these factors impact reactivity and pollutant formation. Due to ongoing expansion of human influence and emissions in previously-pristine areas, understanding the sensitivity of biogenic oxidation to anthropogenic influence has significant impacts for tropospheric air quality, both in the rapidly-developing Amazon Basin and other BVOC-dominated regions.

Multiangular Contributions for Discriminate Seasonal Structural Changes in the Amazon Rainforest Using MODIS MAIAC Data

NASA Astrophysics Data System (ADS)

Moura, Y. M.; Hilker, T.; Galvão, L. S.; Santos, J. R.; Lyapustin, A.; Sousa, C. H. R. D.; McAdam, E.

2014-12-01

The sensitivity of the Amazon rainforests to climate change has received great attention by the scientific community due to the important role that this vegetation plays in the global carbon, water and energy cycle. The spatial and temporal variability of tropical forests across Amazonia, and their phenological, ecological and edaphic cycles are still poorly understood. The objective of this work was to infer seasonal and spatial variability of forest structure in the Brazilian Amazon based on anisotropy of multi-angle satellite observations. We used observations from the Moderate Resolution Imaging Spectroradiometer (MODIS/Terra and Aqua) processed by a new Multi-Angle Implementation Atmospheric Correction Algorithm (MAIAC) to investigate how multi-angular spectral response from satellite imagery can be used to analyze structural variability of Amazon rainforests. We calculated differences acquired from forward and backscatter reflectance by modeling the bi-directional reflectance distribution function to infer seasonal and spatial changes in vegetation structure. Changes in anisotropy were larger during the dry season than during the wet season, suggesting intra-annual changes in vegetation structure and density. However, there were marked differences in timing and amplitude depending on forest type. For instance differences between reflectance hotspot and darkspot showed more anisotropy in the open Ombrophilous forest than in the dense Ombrophilous forest. Our results show that multi-angle data can be useful for analyzing structural differences in various forest types and for discriminating different seasonal effects within the Amazon basin. Also, multi-angle data could help solve uncertainties about sensitivity of different tropical forest types to light versus rainfall. In conclusion, multi-angular information, as expressed by the anisotropy of spectral reflectance, may complement conventional studies and provide significant improvements over approaches that are based on vegetation indices alone.

Climate Impact on South America due to Land Use Degradation of Amazon Rainforest during Winter and Summer Periods by RegCM3 Model

NASA Astrophysics Data System (ADS)

Silva, M. E. S.; Da Rocha, R.; Pereira, G.

2015-12-01

In this study we investigated the climatic impact over South America region due to the increasing of deforestation at the eastern and southern regions of Amazon through the use of the climate model RegCM3 with 50 km of spatial resolution. Many studies, among global and regional models have been used to simulate climatic impact due to deforestation. Most of them used relatively coarse resolution, small domains over South America, besides do not consider deforestation as usually observed. In order to verify the RegCM3 ability to simulate climate impacts due to Amazon deforestation including relatively higher horizontal resolutions, 50 km, a larger domain, the whole South America, deforested areas more similar to the route-shaped commonly seen, and a landuse updating, the model was run for the 2001-2006 period. As the major part of the previous studies focusing Amazon deforestation, RegCM3-50km simulated over degraded areas air temperature increase, ranging from 1.0 to 2.5oC, and precipitation decreasing, ~10%. These aspects are mainly resulting from soil water depletion and roughness vegetation decreasing, both inhibiting evapotranspiration processes. Apart from these results, the model with 50 km simulated precipitation increasing, ~10%, over the eastern South America and adjacent South Atlantic ocean, after Amazon deforestation. Seeking for physical related reasons able to provide the precipitation increasing during rainy seasons, over eastern South America, we found out that upper levels high pressure system (the Bolivian High) intensification, coupled to the southeastward trough, what follows the low troposphere warming, seems to contribute to the precipitation increasing. The climatic impact simulated for winter seasons presents strongest values for areas with altered landuse, over the north region of South America.

Abrupt increases in Amazonian tree mortality due to drought–fire interactions

PubMed Central

Brando, Paulo Monteiro; Balch, Jennifer K.; Nepstad, Daniel C.; Morton, Douglas C.; Putz, Francis E.; Coe, Michael T.; Silvério, Divino; Macedo, Marcia N.; Davidson, Eric A.; Nóbrega, Caroline C.; Alencar, Ane; Soares-Filho, Britaldo S.

2014-01-01

Interactions between climate and land-use change may drive widespread degradation of Amazonian forests. High-intensity fires associated with extreme weather events could accelerate this degradation by abruptly increasing tree mortality, but this process remains poorly understood. Here we present, to our knowledge, the first field-based evidence of a tipping point in Amazon forests due to altered fire regimes. Based on results of a large-scale, long-term experiment with annual and triennial burn regimes (B1yr and B3yr, respectively) in the Amazon, we found abrupt increases in fire-induced tree mortality (226 and 462%) during a severe drought event, when fuel loads and air temperatures were substantially higher and relative humidity was lower than long-term averages. This threshold mortality response had a cascading effect, causing sharp declines in canopy cover (23 and 31%) and aboveground live biomass (12 and 30%) and favoring widespread invasion by flammable grasses across the forest edge area (80 and 63%), where fires were most intense (e.g., 220 and 820 kW⋅m−1). During the droughts of 2007 and 2010, regional forest fires burned 12 and 5% of southeastern Amazon forests, respectively, compared with <1% in nondrought years. These results show that a few extreme drought events, coupled with forest fragmentation and anthropogenic ignition sources, are already causing widespread fire-induced tree mortality and forest degradation across southeastern Amazon forests. Future projections of vegetation responses to climate change across drier portions of the Amazon require more than simulation of global climate forcing alone and must also include interactions of extreme weather events, fire, and land-use change. PMID:24733937

Monitoring Strategies for REDD+: Integrating Field, Airborne, and Satellite Observations of Amazon Forests

NASA Technical Reports Server (NTRS)

Morton, Douglas; Souza, Carlos, Jr.; Souza, Carlos, Jr.; Keller, Michael

2012-01-01

Large-scale tropical forest monitoring efforts in support of REDD+ (Reducing Emissions from Deforestation and forest Degradation plus enhancing forest carbon stocks) confront a range of challenges. REDD+ activities typically have short reporting time scales, diverse data needs, and low tolerance for uncertainties. Meeting these challenges will require innovative use of remote sensing data, including integrating data at different spatial and temporal resolutions. The global scientific community is engaged in developing, evaluating, and applying new methods for regional to global scale forest monitoring. Pilot REDD+ activities are underway across the tropics with support from a range of national and international groups, including SilvaCarbon, an interagency effort to coordinate US expertise on forest monitoring and resource management. Early actions on REDD+ have exposed some of the inherent tradeoffs that arise from the use of incomplete or inaccurate data to quantify forest area changes and related carbon emissions. Here, we summarize recent advances in forest monitoring to identify and target the main sources of uncertainty in estimates of forest area changes, aboveground carbon stocks, and Amazon forest carbon emissions.

Scaling properties reveal regulation of river flows in the Amazon through a forest reservoir

NASA Astrophysics Data System (ADS)

Salazar, Juan Fernando; Villegas, Juan Camilo; María Rendón, Angela; Rodríguez, Estiven; Hoyos, Isabel; Mercado-Bettín, Daniel; Poveda, Germán

2018-03-01

Many natural and social phenomena depend on river flow regimes that are being altered by global change. Understanding the mechanisms behind such alterations is crucial for predicting river flow regimes in a changing environment. Here we introduce a novel physical interpretation of the scaling properties of river flows and show that it leads to a parsimonious characterization of the flow regime of any river basin. This allows river basins to be classified as regulated or unregulated, and to identify a critical threshold between these states. We applied this framework to the Amazon river basin and found both states among its main tributaries. Then we introduce the forest reservoir hypothesis to describe the natural capacity of river basins to regulate river flows through land-atmosphere interactions (mainly precipitation recycling) that depend strongly on the presence of forests. A critical implication is that forest loss can force the Amazonian river basins from regulated to unregulated states. Our results provide theoretical and applied foundations for predicting hydrological impacts of global change, including the detection of early-warning signals for critical transitions in river basins.

Amazon peatlands: quantifying ecosytem's stocks, GHG fluxes and their microbial connections

NASA Astrophysics Data System (ADS)

Cadillo-Quiroz, Hinsby; Lähteenoja, Outi; Buessecker, Steffen; van Haren, Joost

2017-04-01

Reports of hundreds of peatlands across basins in the West and Central Amazon suggest they play an important, previously not considered regional role in organic carbon (OC) and GHG dynamics. Amazon peatlands store ˜3-6 Gt of OC in their waterlogged soils with strong potential for conversion and release of GHG, in fact our recent, and others', efforts have confirmed variable levels of GHG emissions (CO2, N2O, CH4), as well as variable microbial communities across rich to poor soil peatlands. Here, we report early results of quantification of different components making up the aboveground C stocks, the rates and paths for GHG release, and microbial organisms occurring in three ecologically distinct peatland types in the Pastaza-Marañon region of the Peruvian Amazon. Evaluations were done in duplicated continuous monitoring plots established since 2015 at a "palm swamp" (PS), poor "pole forest" (pPF) and a rich "forested" (rF) peatlands. Although overall vegetation "structure" with a few dominant plus several low frequency species was common across the three sites, their botanical composition and tree density was highly contrasting. Aboveground C stocks content showed the following order among sites: rF>PS>pPF, and hence we tested whether this differences can have a direct effect on CH4 emissions rates. CH4 emissions rates from soils were observed in average at 11, 6, and 0.8 mg-C m-2 h-1for rF, PS, and pPF respectively. However, these estimated fluxes needed to be revised when we develop quantifications of CH4 emissions from tree stems. Tree stem fluxes were detected showing a broad variation with nearly nill emissions in some species all the way to maximum fluxes near to ˜90 mg-C m-2 h-1 in other species. Mauritia flexuosa, a highly dominant palm species in PS and ubiquitous to the region, showed the highest ranges of CH4 flux. In the PS site, overall CH4 flux estimate increased by ˜50% when including stem emission weighted by trees' species, density and heights. Flux estimates in p PF did not had a significant change. Analysis across species in the study sites, plus other satellite sites, suggest that in sites stem flux emissions might be conserved with some genera in the Aracaceae, Euphorbiaceae, and Sapotaceae families showing a large emitters capacity. Further characterization also showed that CH4 flux emission from the stems decreases generally with height, suggesting a diffusion constrained stem flux, which seems limited by soil CH4 concentration and wood density. Finally, microbial community composition and methanogenic activity also showed contrasting patterns across sites, with pH being one of the major determinants. GHG producing organisms were detected in different proportions and types across study sites, and importantly methanogenic Archaea closely tracked observed differences of CH4 flux among sites. Nevertheless, the link between vegetation type and density still remain under assessment in our efforts

Distribution and identification of sand flies naturally infected with Leishmania from the Southeastern Peruvian Amazon

PubMed Central

Zorrilla, Victor; De Los Santos, Maxy B.; Espada, Liz; Santos, Rocío del Pilar; Fernandez, Roberto; Urquia, Albino; Stoops, Craig A.; Ballard, Sarah-Blythe; Lescano, Andres G.; Vásquez, Gissella M.; Valdivia, Hugo O.

2017-01-01

Background Cutaneous leishmaniasis (CL) is an important health problem in the New World affecting civilian and military populations that are frequently exposed in endemic settings. The Peruvian region of Madre de Dios located near the border with Brazil is one of the most endemic CL regions in South America with more than 4,451 reported cases between 2010 and 2015 according to the Peruvian epidemiology directorate. However, little is known regarding the diversity and distribution of sand fly vectors in this region. In this study, we aimed to characterize the sand fly fauna in this endemic setting and identify sand fly species naturally infected with Leishmania possibly involved in pathogen transmission. Methods Sand fly collections were carried out during 2014 and 2015 in the communities of Flor de Acre, Villa Primavera, Mavila and Arca Pacahuara using CDC light traps and Shannon traps. Collected specimens were identified and non-blood-fed females were selected for Leishmania infection screening using kinetoplastid DNA-PCR (kDNA-PCR) and nested Real time PCR for species identification. Results A total of 10,897 phlebotomines belonging to the genus Lutzomyia (58 species) and Brumptomyia (2 species) were collected. Our study confirmed the widespread distribution and abundance of Lutzomyia (Trichophoromyia) spp. (24%), Lu. whitmani (19.4%) and Lu. yucumensis (15.8%) in the region. Analysis of Shannon diversity index indicates variability in sand fly composition across sites with Villa Primavera presenting the highest sand fly diversity and abundance. Leishmania screening by kDNA-PCR resulted in 45 positive pools collected from Flor de Acre (34 pools), Mavila (10 pools) and Arca Pacahuara (1 pool) and included 14 species: Lu. yucumensis, Lu. aragoi, Lu. sallesi, Lu. sherlocki, Lu. shawi, Lu. walkeri, Lu nevesi, Lu. migonei, Lu. davisi, Lu. carrerai, Lu. hirsuta, Lu. (Trichophoromyia) spp., Lu. llanosmartinsi and Lu. whitmani. Lutzomyia sherlocki, Lu. walkeri and Lu. llanosmartinsi had the highest infection rates (8%, 7% and 6%, respectively). We identified Leishmania guyanensis in two Lu. whitmani pools, and L. braziliensis in two Lu. llanosmartinsi pools and one Lu. davisi pool. Conclusions Based on our collections there is high sand fly diversity in Madre de Dios, with differences in sand fly abundance and species composition across sites. We identified 14 sand fly species naturally infected with Leishmania spp., having detected natural infection with L. (V.) guyanensis and L. (V.) braziliensis in three sand fly species. These results suggest the presence of several potential vectors that vary in their spatial and geographical distribution, which could explain the high prevalence of CL cases in this region. PMID:29107954

Global conservation significance of Ecuador's Yasuní National Park.

PubMed

Bass, Margot S; Finer, Matt; Jenkins, Clinton N; Kreft, Holger; Cisneros-Heredia, Diego F; McCracken, Shawn F; Pitman, Nigel C A; English, Peter H; Swing, Kelly; Villa, Gorky; Di Fiore, Anthony; Voigt, Christian C; Kunz, Thomas H

2010-01-19

The threats facing Ecuador's Yasuní National Park are emblematic of those confronting the greater western Amazon, one of the world's last high-biodiversity wilderness areas. Notably, the country's second largest untapped oil reserves--called "ITT"--lie beneath an intact, remote section of the park. The conservation significance of Yasuní may weigh heavily in upcoming state-level and international decisions, including whether to develop the oil or invest in alternatives. We conducted the first comprehensive synthesis of biodiversity data for Yasuní. Mapping amphibian, bird, mammal, and plant distributions, we found eastern Ecuador and northern Peru to be the only regions in South America where species richness centers for all four taxonomic groups overlap. This quadruple richness center has only one viable strict protected area (IUCN levels I-IV): Yasuní. The park covers just 14% of the quadruple richness center's area, whereas active or proposed oil concessions cover 79%. Using field inventory data, we compared Yasuní's local (alpha) and landscape (gamma) diversity to other sites, in the western Amazon and globally. These analyses further suggest that Yasuní is among the most biodiverse places on Earth, with apparent world richness records for amphibians, reptiles, bats, and trees. Yasuní also protects a considerable number of threatened species and regional endemics. Yasuní has outstanding global conservation significance due to its extraordinary biodiversity and potential to sustain this biodiversity in the long term because of its 1) large size and wilderness character, 2) intact large-vertebrate assemblage, 3) IUCN level-II protection status in a region lacking other strict protected areas, and 4) likelihood of maintaining wet, rainforest conditions while anticipated climate change-induced drought intensifies in the eastern Amazon. However, further oil development in Yasuní jeopardizes its conservation values. These findings form the scientific basis for policy recommendations, including stopping any new oil activities and road construction in Yasuní and creating areas off-limits to large-scale development in adjacent northern Peru.

Extinction risks forced by climatic change and intraspecific variation in the thermal physiology of a tropical lizard.

PubMed

Pontes-da-Silva, Emerson; Magnusson, William E; Sinervo, Barry; Caetano, Gabriel H; Miles, Donald B; Colli, Guarino R; Diele-Viegas, Luisa M; Fenker, Jessica; Santos, Juan C; Werneck, Fernanda P

2018-04-01

Temperature increases can impact biodiversity and predicting their effects is one of the main challenges facing global climate-change research. Ectotherms are sensitive to temperature change and, although predictions indicate that tropical species are highly vulnerable to global warming, they remain one of the least studied groups with respect to the extent of physiological variation and local extinction risks. We model the extinction risks for a tropical heliothermic teiid lizard (Kentropyx calcarata) integrating previously obtained information on intraspecific phylogeographic structure, eco-physiological traits and contemporary species distributions in the Amazon rainforest and its ecotone to the Cerrado savannah. We also investigated how thermal-biology traits vary throughout the species' geographic range and the consequences of such variation for lineage vulnerability. We show substantial variation in thermal tolerance of individuals among thermally distinct sites. Thermal critical limits were highly correlated with operative environmental temperatures. Our physiological/climatic model predicted relative extinction risks for local populations within clades of K. calcarata for 2050 ranging between 26.1% and 70.8%, while for 2070, extinction risks ranged from 52.8% to 92.8%. Our results support the hypothesis that tropical-lizard taxa are at high risk of local extinction caused by increasing temperatures. However, the thermo-physiological differences found across the species' distribution suggest that local adaptation may allow persistence of this tropical ectotherm in global warming scenarios. These results will serve as basis to further research to investigate the strength of local adaptation to climate change. Persistence of Kentropyx calcarata also depends on forest preservation, but the Amazon rainforest is currently under high deforestation rates. We argue that higher conservation priority is necessary so the Amazon rainforest can fulfill its capacity to absorb the impacts of temperature increase on tropical ectotherms during climate change. Copyright © 2018 Elsevier Ltd. All rights reserved.

Changing Amazon biomass and the role of atmospheric CO2 concentration, climate, and land use

NASA Astrophysics Data System (ADS)

Almeida Castanho, Andrea D.; Galbraith, David; Zhang, Ke; Coe, Michael T.; Costa, Marcos H.; Moorcroft, Paul

2016-01-01

The Amazon tropical evergreen forest is an important component of the global carbon budget. Its forest floristic composition, structure, and function are sensitive to changes in climate, atmospheric composition, and land use. In this study biomass and productivity simulated by three dynamic global vegetation models (Integrated Biosphere Simulator, Ecosystem Demography Biosphere Model, and Joint UK Land Environment Simulator) for the period 1970-2008 are compared with observations from forest plots (Rede Amazónica de Inventarios Forestales). The spatial variability in biomass and productivity simulated by the DGVMs is low in comparison to the field observations in part because of poor representation of the heterogeneity of vegetation traits within the models. We find that over the last four decades the CO2 fertilization effect dominates a long-term increase in simulated biomass in undisturbed Amazonian forests, while land use change in the south and southeastern Amazonia dominates a reduction in Amazon aboveground biomass, of similar magnitude to the CO2 biomass gain. Climate extremes exert a strong effect on the observed biomass on short time scales, but the models are incapable of reproducing the observed impacts of extreme drought on forest biomass. We find that future improvements in the accuracy of DGVM predictions will require improved representation of four key elements: (1) spatially variable plant traits, (2) soil and nutrients mediated processes, (3) extreme event mortality, and (4) sensitivity to climatic variability. Finally, continued long-term observations and ecosystem-scale experiments (e.g. Free-Air CO2 Enrichment experiments) are essential for a better understanding of the changing dynamics of tropical forests.

Amazon Deforestation Fires Increase Plant Productivity through Changes in Diffuse Radiation

NASA Astrophysics Data System (ADS)

Rap, A.; Reddington, C.; Spracklen, D. V.; Mercado, L.; Haywood, J. M.; Bonal, D.; Butt, N.; Phillips, O.

2013-12-01

Over the past few decades a large increase in carbon storage has been observed in undisturbed forests across Amazonia. The reason for such a sink is unclear, although many possible mechanisms have been suggested, including changes in temperature, carbon dioxide, precipitation, clouds, and solar radiation. In this work we focus on one such mechanism, namely the increase in plant photosynthesis due to changes in diffuse radiation caused by atmospheric aerosols from large-scale deforestation fires that now occur throughout the Amazon region. We estimate that this mechanism has increased dry season (August-September) net primary productivity (NPP) by up to 30% across wide regions of the Amazon. We conclude that aerosol from deforestation fires may be responsible for a substantial fraction of the Amazon carbon sink that has been observed. Our approach is based on the combined use of three models: (i) the Global Model of Aerosol Processes (GLOMAP), (ii) the Edwards-Slingo radiation model, and (iii) the UK Met Office JULES land-surface scheme, constrained against in-situ aerosol and radiation observation datasets from several Amazonian sites. A 10 year (1999-2008) GLOMAP simulation using GFED3 biomass burning emissions is first evaluated against aerosol observations, indicating that the model is able to capture the Amazon aerosol seasonality, with enhanced concentrations during the dry season driven by biomass burning. The radiation scheme is then shown to be in good agreement with total and diffuse radiation in-situ observations, the model being able to capture the high total and low diffuse radiation flux in the dry season, as well as the low total and high diffuse radiation flux in the wet season. We then use our modelling framework to quantify the contribution of deforestation fires to diffuse/direct radiation fraction and forest productivity. We calculate that deforestation fires increase dry season diffuse radiation by up to 60% or 30 Wm-2. Finally, we use the JULES model to show that this increase in diffuse radiation is responsible for a substantial growth in gross primary productivity (GPP), enhancing Amazon-wide dry-season GPP by 5% with local increases of up to 15%. Most of this GPP response results in an increase in NPP, estimated in the dry season at 10% across the Amazon with local increases as large as 30%. This substantial NPP enhancement spatially matches observed increases in forest biomass storage across the Amazon. We thus suggest that deforestation fires have an important impact on the Amazon carbon budget and attempt to estimate the fraction of the observed forest carbon sink that can be attributed to this mechanism. Change [%] in diffuse radiation due to deforestation

Research trends in Carrion's disease in the last 60 years. A bibliometric assessment of Latin American scientific production.

PubMed

Culquichicón, Carlos; Ramos-Cedano, Emanuel; Helguero-Santin, Luis; Niño-Garcia, Roberto; Rodriguez-Morales, Alfonso J

2018-03-01

Carrion's disease is a major re-emerging and occupational health disease. This bibliometric study aimed to evaluate scientific production on this disease both globally and in Latin America. SCI-E, MEDLINE/GoPubMed, SCOPUS, ScIELO, and LILACS databases were searched for Carrion's disease-related articles. They were classified according to publication year, type, city and institution of origin, international cooperation, scientific journal, impact factor, publication language, author(s), and H-index. There were 170 articles in SCI-E. The USA was the largest contributor (42.9%), followed by Peru (24.1%) and Spain (12.4%). Latin American publications were cited 811 times (regional H-index=18). There were 335 articles in SCOPUS: 25.9%, 11.6%, and 8.3% were published by the USA, Peru, and Spain, respectively. Latin American publications were cited 613 times (H-index=12): Peru, Colombia, and Brazil received the most citations (n=395, H-index=10; n=61, H-index=1; and n=54, H-index=4, respectively). The most scientifically productive American institution was the University of Montana (2.9% of American production). In Peru, it was the Institute of Tropical Medicine Alexander von Humboldt of Peruvian University Cayetano Heredia (6.5% of Peruvian scientific production). There were 3,802 articles in Medline (1.2% were Peruvian), 35 in SciELO (94.3% were from Peru), and 168 in LILACS (11% were published in 2010-2014; only one article was published in 2015). Scientific production worldwide is led by the USA, and, in Latin America, by Peru and Brazil. However, Latin American scientific production in bibliographic databases is much lower than in other regions, despite being an endemic area for Carrion's disease.

A New Astronomical Facility for Peru: Converting a Telecommunication's 32 Meter Parabolic Antenna into a Radio Telescope

NASA Astrophysics Data System (ADS)

Ishitsuka, J. K.; Ishitsuka, M.; Inoue, M.; Kaifu, N.; Miyama, S.; Tsuboi, M.; Ohishi, M.; Fujisawa, K.; Kasuga, T.; Kondo, T.; Horiuchi, S.; Umemoto, T.; Miyoshi, M.; Miyazawa, K.; Bushimata, T.; Vidal, E. D.

2006-08-01

In 1984 Nippon Electric Company constructed an INTELSAT antenna at 3,370 meters above the sea level on the Peruvian Andes. Entel Peru, the Peruvian telecommunications company, managed the antenna station until 1993. This year the government transferred the station to a private telecommunications company, Telefónica del Peru. Since the satellite communications were rapidly replaced by transoceanic fiber optics, the beautiful 32 meters parabolic antenna has been unused since 2002.. In cooperation with the National Astronomical Observatory of Japan we began to convert the antenna into a radio telescope. Because researches on interstellar medium around Young Stellar Objects (YSO) will be able to observe the methanol masers that emit at 6.7 GHz, initially we will monitor the 6.7 GHz methanol masers and survey the southern sky. An ambient temperature receiver with Trx= 60 K was developed at Nobeyama Radio Observatory and is ready to be installed. The antenna control system is the Field System FS9 software installed in a Linux PC. An interface between the antenna and the PC was developed at Kashima Space Research Center in Japan. In the near future we plan to install the 2 GHz, 8 GHz, 12 GHz and 22 GHz receivers. The unique location and altitude of the Peruvian Radio Observatory will be useful for VLBI observations in collaboration with global arrays such as the VLBA array for astronomical observation and geodetic measurements. For Peru where few or almost no astronomical observational instruments are available for research, the implementation of the first radio observatory is a big and challenging step, and foster sciences at graduate and postgraduate levels of universities. Worldwide telecommunications antennas possibly are unused and with relative few investment could be transformed into a useful observational instrument.

Seasonal and spatial contrasts of sedimentary organic carbon in floodplain lakes of the central Amazon basin.

NASA Astrophysics Data System (ADS)

Sobrinho, Rodrigo; Kim, Jung-Hyun; Abril, Gwenaël; Zell, Claudia; Moreira-Turcq, Patricia; Mortillaro, Jean-Michel; Meziane, Tarik; Damsté, Jaap; Bernardes, Marcelo

2014-05-01

Three-quarters of the area of flooded land in the world are temporary wetlands (Downing, 2009), which play a significant role in the global carbon cycle(Einsele et al., 2001; Cole et al., 2007; Battin et al., 2009; Abril et al., 2013). Previous studies of the Amazonian floodplain lakes (várzeas), one important compartment of wetlands, showed that the sedimentation of organic carbon (OC) in the floodplain lakes is strongly linked to the periodical floods and to the biogeography from upstream to downstream(Victoria et al., 1992; Martinelli et al., 2003). However, the main sources of sedimentary OC remain uncertain. Hence, the study of the sources of OC buried in floodplain lake sediments can enhance our understanding of the carbon balance of the Amazon ecosystems. In this study, we investigated the seasonal and spatial pattern of sedimentary organic matter in five floodplain lakes of the central Amazon basin (Cabaliana, Janauaca, Canaçari, Miratuba, and Curuai) which have different morphologies, hydrodynamics and vegetation coverage. Surface sediments were collected in four hydrological seasons: low water (LW), rising water (RW), high water (HW) and falling water (FW) in 2009 and 2010. We investigated commonly used bulk geochemical tracers such as C:N ratio and stable isotopic composition of organic carbon (δ13COC). These results were compared with lignin-phenol parameters as an indicator of vascular plant detritus (Hedges and Ertel, 1982) and branched glycerol dialkyl glycerol tetraethers (brGDGTs) to trace the soil OC from land to the aquatic settings (Hopmans et al., 2004). Our data showed that during the RW and FW seasons, the concentration of lignin and brGDGTs were higher in comparison to other seasons. Our study also indicated that floodplain lake sediments primarily consisted of a mixture of C3 plant detritus and soil OC. However, a downstream increase in C4 plant-derived OC contribution was observed along the gradient of increasingly open waters, i.e. from upstream to downstream. We also identify the OC contribution from the seasonally flooded forests, i.e. temporary wetlands as the most important source of sedimentary OC in floodplain lakes. Accordingly, we attribute temporal and spatial difference in sedimentary OC composition to the hydrological connectivity between the Amazon River and its floodplain lakes and thus between the surrounding forests and the floodplain lakes. References: Abril, G., J.-M.Martinez, Artigas, L.F., Moreira-Turcq, P., Benedetti, M.P., Vidal, L., Meziane, T., Kim, J.-H., Bernardes, M.C., Savoye, N., Deborde, J., Albéric, P., Souza, M.F.L., Souza, E.L., Roland, F. Amazon River carbon dioxide outgassing fuelled by wetlands. Nature accepted (2013). Battin, T.J., Luyssaert, S., Kaplan, L.A., Aufdenkampe, A.K., Richter, A., Tranvik, L.J., 2009. The boundless carbon cycle. Nature Geoscience 2, 598 - 600 (2009). Cole, J.J., Prairie, Y.T., Caraco, N.F., McDowell, W.H., Tranvik, L.J., Striegl, R.G., Duarte, C.M., Kortelainen, P., Downing, J.A., Middelburg, J.J., Melack, J. Plumbing the Global Carbon Cycle: Integrating Inland Waters into the Terrestrial Carbon Budget. Ecosystems 10, 171 - 184 (2007). Downing, J. A. Global limnology: up-scaling aquatic services and processes to planet Earth. Verh Internat Verein Limnol 30, 1149.-1166 (2009). Einsele, G., Yan, J., Hinderer, M. Atmospheric carbon burial in modern lake basins and its significance for the global carbon budget. Global and Planetary Change 30, 167 - 195 (2001). Hedges, J.I., Ertel, J.R. Characterization of Lignin by Gas Capillary Chromatography of Cupric Oxide Oxidation Products. Analitical Chemistry 54, 174-178 (1982). Hopmans, E.C., Weijers, J.W.H., Schefu, E., Herfort, L., Damste, J.S.S., Schouten, S.,. A novel proxy for terrestrial organic matter in sediments based on branched and isoprenoid tetraether lipids. Earth and Planetary Science Letters 224, 107 - 116 (2004). Martinelli, L.A., Victoria, R.L., Camargo, P.B.d., Piccolo, M.d.C., Mertes, L., Richey, J.E., Devol, A.H., Forsberg, B.R.. Inland variability of carbon-nitrogen concentrations and d13C in Amazon floodplain (várzea) vegetation and sediment. Hydrol. Process. 17, 1419-1430 (2003). Victoria, R.L., Martinelli, L.A., Trivelin, P.C.O., Matsui, E., Forsberg, B.R., Richey, J.E., Devol, A.H.. The use of stable isotopes in studies of nutrient cycling: Carbon Isotope composition of Amazon varzea sediments. Biotropica 24, 240-249 (1992).

The International Criminal Court: Why We Need It, How We Got It, Our Concern About It

DTIC Science & Technology

2005-07-01

use of military tribunals was in combating terrorists in Peru. The Peruvian government used military tribunals as an effective way to protect the...of the same reasons given for military tribunals by the current administration. The Peruvian government had much success using military tribunals...remains under indictment in self-exile, while his enforcer former spy chief, Vladimiro Montesinos, is held in a Peruvian prison. Because of the problems

Centile Curves and Reference Values for Height, Body Mass, Body Mass Index and Waist Circumference of Peruvian Children and Adolescents

PubMed Central

Bustamante, Alcibíades; Freitas, Duarte; Pan, Huiqi; Katzmarzyk, Peter T.; Maia, José

2015-01-01

This study aimed to provide height, body mass, BMI and waist circumference (WC) growth centile charts for school-children, aged 4–17 years, from central Peru, and to compare Peruvian data with North-American and Argentinean references. The sample consisted of 8753 children and adolescents (4130 boys and 4623 girls) aged 4 to 17 years, from four Peruvian cities: Barranco, La Merced, San Ramón and Junín. Height, body mass and WC were measured according to standardized techniques. Centile curves for height, body mass, BMI and WC were obtained separately for boys and girls using the LMS method. Student t-tests were used to compare mean values. Overall boys have higher median heights than girls, and the 50th percentile for body mass increases curvilinearly from 4 years of age onwards. In boys, the BMI and WC 50th percentiles increase linearly and in girls, the increase presents a curvilinear pattern. Peruvian children are shorter, lighter and have higher BMI than their counterparts in the U.S. and Argentina; in contrast, age and sex-specific WC values are lower. Height, body mass and WC of Peruvian children increased with age and variability was higher at older ages. The growth patterns for height, body mass, BMI and WC among Peruvian children were similar to those observed in North-American and Argentinean peers. PMID:25761169

English-Portuguese Equivalents of Forestry and Conservation Terms

Treesearch

John K. Francis

1994-01-01

Signs of deterioration of the global environment and threatened destruction of the vast Amazon forest have stirred a call for action.Conservationists have always been concerned about the tropical forests; now funds are being made available for increased work on problems in the region. Brazilian scientists struggle to communicate with colleagues in the rest of the world...

Dynamics of Dissolved Organic Matter in Amazon Basin: Insights into Negro River Contribution

NASA Astrophysics Data System (ADS)

Moreira-Turcq, P.; Perez, M. P.; Benedetti, M.; Oliveira, M. A.; Lagane, C.; Seyler, P.; Oliveira, E.

2006-12-01

The study of global carbon cycle requires a precise knowledge of spatial and temporal distributions and exportation from continents to oceans. Organic carbon fluxes represent approximately half of the total carbon budget carried by rivers. Tropical rivers transport two third of the total organic carbon discharged into the world oceans but important gaps still exist in the knowledge of the tropical river carbon biochemistry. The Amazon River is responsible for 10% of the annual amount of organic carbon transported from rivers to oceans. The most important portion of total organic matter transported in the Amazon Basin is the dissolved fraction (between 80% and 95%). Amazonian annual flux of dissolved organic matter is directly related to hydrological variations. All rivers in the Amazon basin are characterized by monomodal hydrograms, with a low water period in october/november and a high water period in may/june. Temporal variations in Amazon dissolved organic carbon (3.0 to 9.1 mg l^{- 1}) are mainly controled by Negro River inputs. DOC and DON contributions from the Negro River can vary between 120 kgC s-1 and 520 kg C s-1, and between 5 kgN s--1 and 15 kgN s-1, during low and high water period, respectivelly. In the Negro River, during high water stages, while DOC concentrations are stable from the upstream stations to the downstream ones (about 11 mg l-1), discharge increases from 16000 to 46000 m3 s-1 and NOD can quintuple from upstream (0.071 mg l-1) to downstream (0.341 mg l-1). Then the nature of dissolved organic matter is variable (C/N ratio varied from 33 to 120 from upstream to downstream). During low water stages DOC concentrations are lower (mean DOC of 8.1 mg l-1) while DON is in the same range, discharge is about 10000 m3 s-1 at downstream stations of Negro River and the C/N ratio is lower and steadier along the River. Finaly, despite a low basin surface (12%) compared with the two other main Amazon tributaries, Solimões and Madeira Rivers, and a mean annual water input to Amazonas of 15%, the Negro River contributes with about 38% of the total organic dissolved carbon transported by the Amazon River.

Recovery of Methane Consumption by Secondary Forests in the Amazon River Basin

NASA Astrophysics Data System (ADS)

Webster, K. D.; Meredith, L. K.; Piccini, W.; Pedrinho, A.; Nüsslein, K.; Van Haren, J. L. M.; Camargo, P. B. D.; Mui, T. S.; Saleska, S. R.

2017-12-01

Methane (CH4) is a major greenhouse gas in Earth's atmosphere and its atmospheric global mole fraction has roughly doubled since the start of the industrial revolution. The tropics are thought to be a major CH4 emitter, with the Amazon River Basin estimated to contribute 7 % of the annual flux to the atmosphere. The Amazon has experienced extensive land use change during the past 30 years, but we lack an understanding of the qualitative and quantitative effects of land use change on CH4 flux from the Amazon and the associated reasons. To illuminate the factors controlling CH4 flux across land use gradients in the Amazon we measured the CH4 fluxes and will measure the associated stable isotopic composition from pastures, primary forests, and secondary forests, at Ariquemes (Western Amazon, more deforested), and Santarem (Eastern Amazon, less deforested), Brazil. The sites near Santarem were sampled in June of 2016 and the sites near Ariquemes were sampled in March and April of 2017, both at the end of the wet season. Little difference was observed between land use types in Santarem with each land use type slightly consuming atmospheric CH4. However, pasture fluxes at Ariquemes were higher (+520 μg-C m-2 hr-1) than in primary (0 μg-C m-2 hr-1) and secondary forests (-20 μg-C m-2 hr-1; p = 6*10-4). CH4 flux from individual Santarem sites was not correlated with environmental variables. CH4 flux from Airquemes was correlated with several parameters across all samples including soil temperature (p = 7*10-4), and soil humidity (p = 0.02). Despite the fact that pastures experienced higher soil temperatures than forest soils this appears to be a low predictor of CH4 flux from these environments as it was seen at both Santarem and Ariquemes. The analysis of the stable isotopic composition of CH4 from these chambers will aid in understanding the competing processes of microbial CH4 consumption and production in these soils and why pastures may become CH4 sources and secondary forests are able to regain the function as a CH4 sink in some instances. Support: NSF, FAPESP-Biota, CNPq, CAPES.

Is Intimate Partner and Client Violence Associated with Condomless Anal Intercourse and HIV Among Male Sex Workers in Lima, Peru?

PubMed

George, Paul E; Bayer, Angela M; Garcia, Patricia J; Perez-Lu, Jose E; Burke, Jessica G; Coates, Thomas J; Gorbach, Pamina M

2016-09-01

Violence experience can increase HIV risk behaviors; however, literature is scarce on violence among male sex workers (MSWs) globally. In 2014, 210 Peruvian MSWs (median age 24.9) were interviewed about their experience of physical, emotional, and sexual violence and condom use with non-paying intimate partners and clients and were tested for HIV. Multivariable models examined relationships between violence in the past 6 months, condomless anal intercourse (CLAI) in the past 3 months and HIV infection. HIV infection (24 %), CLAI (43 %), being a violence victim (42 %) and perpetrator (39 %) were common. In separate multivariable models, being a violence victim [adjusted prevalence ratio aPR = 1.49 (95 % CI 1.09-2.03)] and perpetrator [aPR = 1.39 (1.03-1.87)] were associated with CLAI. Further, being a victim [aPR = 1.65 (1.04-2.62)] was associated with HIV infection. Violence, which was significantly associated with CLAI and HIV infection, is common among Peruvian MSWs, reinforcing the importance of violence awareness and prevention as HIV risk-reduction strategies.

Isoprene photochemistry over the Amazon rainforest.

PubMed

Liu, Yingjun; Brito, Joel; Dorris, Matthew R; Rivera-Rios, Jean C; Seco, Roger; Bates, Kelvin H; Artaxo, Paulo; Duvoisin, Sergio; Keutsch, Frank N; Kim, Saewung; Goldstein, Allen H; Guenther, Alex B; Manzi, Antonio O; Souza, Rodrigo A F; Springston, Stephen R; Watson, Thomas B; McKinney, Karena A; Martin, Scot T

2016-05-31

Isoprene photooxidation is a major driver of atmospheric chemistry over forested regions. Isoprene reacts with hydroxyl radicals (OH) and molecular oxygen to produce isoprene peroxy radicals (ISOPOO). These radicals can react with hydroperoxyl radicals (HO2) to dominantly produce hydroxyhydroperoxides (ISOPOOH). They can also react with nitric oxide (NO) to largely produce methyl vinyl ketone (MVK) and methacrolein (MACR). Unimolecular isomerization and bimolecular reactions with organic peroxy radicals are also possible. There is uncertainty about the relative importance of each of these pathways in the atmosphere and possible changes because of anthropogenic pollution. Herein, measurements of ISOPOOH and MVK + MACR concentrations are reported over the central region of the Amazon basin during the wet season. The research site, downwind of an urban region, intercepted both background and polluted air masses during the GoAmazon2014/5 Experiment. Under background conditions, the confidence interval for the ratio of the ISOPOOH concentration to that of MVK + MACR spanned 0.4-0.6. This result implies a ratio of the reaction rate of ISOPOO with HO2 to that with NO of approximately unity. A value of unity is significantly smaller than simulated at present by global chemical transport models for this important, nominally low-NO, forested region of Earth. Under polluted conditions, when the concentrations of reactive nitrogen compounds were high (>1 ppb), ISOPOOH concentrations dropped below the instrumental detection limit (<60 ppt). This abrupt shift in isoprene photooxidation, sparked by human activities, speaks to ongoing and possible future changes in the photochemistry active over the Amazon rainforest.

Isoprene photochemistry over the Amazon rainforest

NASA Astrophysics Data System (ADS)

Liu, Yingjun; Brito, Joel; Dorris, Matthew R.; Rivera-Rios, Jean C.; Seco, Roger; Bates, Kelvin H.; Artaxo, Paulo; Duvoisin, Sergio; Keutsch, Frank N.; Kim, Saewung; Goldstein, Allen H.; Guenther, Alex B.; Manzi, Antonio O.; Souza, Rodrigo A. F.; Springston, Stephen R.; Watson, Thomas B.; McKinney, Karena A.; Martin, Scot T.

2016-05-01

Isoprene photooxidation is a major driver of atmospheric chemistry over forested regions. Isoprene reacts with hydroxyl radicals (OH) and molecular oxygen to produce isoprene peroxy radicals (ISOPOO). These radicals can react with hydroperoxyl radicals (HO2) to dominantly produce hydroxyhydroperoxides (ISOPOOH). They can also react with nitric oxide (NO) to largely produce methyl vinyl ketone (MVK) and methacrolein (MACR). Unimolecular isomerization and bimolecular reactions with organic peroxy radicals are also possible. There is uncertainty about the relative importance of each of these pathways in the atmosphere and possible changes because of anthropogenic pollution. Herein, measurements of ISOPOOH and MVK + MACR concentrations are reported over the central region of the Amazon basin during the wet season. The research site, downwind of an urban region, intercepted both background and polluted air masses during the GoAmazon2014/5 Experiment. Under background conditions, the confidence interval for the ratio of the ISOPOOH concentration to that of MVK + MACR spanned 0.4-0.6. This result implies a ratio of the reaction rate of ISOPOO with HO2 to that with NO of approximately unity. A value of unity is significantly smaller than simulated at present by global chemical transport models for this important, nominally low-NO, forested region of Earth. Under polluted conditions, when the concentrations of reactive nitrogen compounds were high (>1 ppb), ISOPOOH concentrations dropped below the instrumental detection limit (<60 ppt). This abrupt shift in isoprene photooxidation, sparked by human activities, speaks to ongoing and possible future changes in the photochemistry active over the Amazon rainforest.

The size distribution of organic carbon in headwater streams in the Amazon basin.

PubMed

de Paula, Joana D'Arc; Luizão, Flávio Jesus; Piedade, Maria Teresa Fernandez

2016-06-01

Despite the strong representativeness of streams in the Amazon basin, their role in the accumulation of coarse particulate organic carbon (CPOC), fine particulate organic carbon (FPOC), and dissolved organic carbon (DOC) in transport, an important energy source in these environments, is poorly known. It is known that the arboreal vegetation in the Amazon basin is influenced by soil fertility and rainfall gradients, but would these gradients promote local differences in organic matter in headwater streams? To answer this question, 14 low-order streams were selected within these gradients along the Amazon basin, with extensions that varied between 4 and 8 km. The efficiency of the transformation of particulate into dissolved carbon fractions was assessed for each stream. The mean monthly benthic organic matter storage ranged between 1.58 and 9.40 t ha(-1) month(-1). In all locations, CPOC was the most abundant fraction in biomass, followed by FPOC and DOC. Rainfall and soil fertility influenced the distribution of the C fraction (p = 0.01), showing differentiated particulate organic carbon (POC) storage and DOC transportation along the basin. Furthermore, the results revealed that carbon quantification at the basin level could be underestimated, ultimately influencing the global carbon calculations for the region. This is especially due to the fact that the majority of studies consider only fine particulate organic matter and dissolved organic matter, which represent less than 50 % of the stored and transported carbon in streambeds.

Exploring trade-offs between carbon storage, yield and biodiversity in analog forestry. A case study in the Peruvian Amazon

NASA Astrophysics Data System (ADS)

Recanati, F.; Saini, M.; Guariso, G.; Melia, P.

2016-12-01

Creation and management of agro-ecosystems can considerably influence the greenhouse gas exchange between terrestrial ecosystems and atmosphere. This is especially evident for tropical areas, where the expansion of agricultural lands for monoculture is among the main causes of deforestation and consequent CO2 emissions. In these contexts, agro-ecological approaches, such as analog forestry, seem promising alternatives to intensive ones. Analog forestry is usually created for reforestation purposes through the combination of ecological succession and architecture of natural forests (i.e., inclusion of species from shrubs to higher trees). Besides provisioning a variety of food and medicinal products, they provide high levels of biodiversity (compared to other agricultural practices) and important ecosystem services, like carbon storage. Given the complexity of such agro-ecosystems, this study aims to estimate the quantity of carbon that can be stored in an analog forest as a function of its species composition. Consequently, trade-offs between performances in terms of carbon storage, productivity and biodiversity are explored. The analysis focuses on the Peruvian region of Madre de Dios, where native forest and its biodiversity is threatened by intensive agriculture. To quantify plant above- and belowground biomass and the related carbon content, we feed appropriate allometric models with plant morphological information gathered in the field. Relying on our database of productive plant species suitable for the region, we formulate an optimization problem aimed at the selection of plant population under different constraint systems. The latter are defined according to possible farmers' preferences (e.g., average profitability or multi-functionality). The analysis refers to the farm-scale and is performed over medium-term horizon (i.e., 40 years), in order to take into account important plant dynamics (species growth and the evolution of shade interaction). Preliminary results highlight a clear conflict between carbon storage, productivity and biodiversity: over the considered time horizon, a greater presence of higher and long-living tree species guarantees greater levels of carbon storage, while the most profitable solutions include few fast-growing bush species.

Speleothem records of changes in the South American Summer Monsoon during MIS stages 5 and 6

NASA Astrophysics Data System (ADS)

Burns, S. J.; Kanner, L.; Cheng, H.; Edwards, R.

2011-12-01

Little information exists about the behavior of the South American Summer Monsoon prior to the Last Glacial Period. Speleothems from the Peruvian Altiplano are one possible archive of SASM intensity because oxygen isotopes of rainfall on the Altiplano are primarily controlled by the intensity of rainfall in upstream moisture source region, the Amazon Basin. Here, we present results from a two speleothems collected from Gruta de Huagapo, a cave in the central Peruvian Altiplano (12°S, 76°W, ~3800m elevation). The samples grew from approximately 115-125 ky BP and from 136-168 ky BP, spanning time periods equivalent to much of MIS stage 5e and the transition into MIS 5d and MIS 6. Chronologies were determined by U-Th dating techniques and the dates are in stratigraphic with analytical errors < 0.4%. 100 preliminary δ18O values were micromilled from each sample along the growth axis. Oxygen isotopic values of the younger sample, stalagmite P10-H1, range from -12.5% to -16.5%. The overall trend in isotopic values generally parallels summer insolation, with more depleted values associated with greater insolation. The most enriched values, between -12.5% and -13.5% occur from 121-125 ky BP, with an abrupt transition to more depleted values at 121 ky BP. The values plateau at about -15% until 117 ky BP, then abruptly decrease again to around -16 % for the rest of the record. The enriched values during the middle and latter parts of MIS 5e suggest a weakened monsoon during that time and coincide with observed low lake levels at Lake Titicaca (Fritz et al, 2007). At present we have isotopic data from only the youngest 10 ky of the older sample. The values are generally more depleted, with most between -16% and -17%, suggesting an intensified SASM during MIS 6 as compared to 5e. A rapid increase in δ18O occurs at ~136 ky BP. Overall the trends in the data parallel major changes in δD from EPICA, but appear to lead the Antarctic time series by ~2 ky.

"I am not [just] a rabbit who has a bunch of children!": agency in the midst of suffering at the intersections of global inequalities, gendered violence, and migration.

PubMed

Parson, Nia

2010-08-01

This article is based on an analysis of the life history narrative of Antonia, a Peruvian immigrant in Chile, in the context of ethnographic research on Chilean women's experiences of domestic violence (DV) and the post-dictatorship state's responses to DV. Structural and socio-cultural constraints and forms of violence, including global and local economic inequalities, migration, racism, and intimate, gender-based abuses in both home and receiving countries interact in Antonia's experience to produce suffering and influence a form of gendered agency. This analysis points to the need for research and policies specifically designed to attend to the intersecting vulnerabilities migrant women who suffer DV often face, as well as their agentive acts.