Science.gov

Sample records for pllup henn ojaveer

  1. 4He+n+n continuum within an ab initio framework

    DOE PAGES

    Romero-Redondo, Carolina; Quaglioni, Sofia; Navratil, Petr; ...

    2014-07-16

    In this study, the low-lying continuum spectrum of the 6He nucleus is investigated for the first time within an ab initio framework that encompasses the 4He+n+n three-cluster dynamics characterizing its lowest decay channel. This is achieved through an extension of the no-core shell model combined with the resonating-group method, in which energy-independent nonlocal interactions among three nuclear fragments can be calculated microscopically, starting from realistic nucleon-nucleon interactions and consistent ab initio many-body wave functions of the clusters. The three-cluster Schrödinger equation is solved with three-body scattering boundary conditions by means of the hyperspherical-harmonics method on a Lagrange mesh. Using amore » soft similarity-renormalization-group evolved chiral nucleon-nucleon potential, we find the known Jπ = 2+ resonance as well as a result consistent with a new low-lying second 2+ resonance recently observed at GANIL at ~2.6 MeV above the He6 ground state. We also find resonances in the 2–, 1+, and 0– channels, while no low-lying resonances are present in the 0+ and 1– channels.« less

  2. Cladosporium cladosporioides and Cladosporium pseudocladosporioides as potential new fungal antagonists of Puccinia horiana Henn., the causal agent of chrysanthemum white rust.

    PubMed

    Torres, David Eduardo; Rojas-Martínez, Reyna Isabel; Zavaleta-Mejía, Emma; Guevara-Fefer, Patricia; Márquez-Guzmán, G Judith; Pérez-Martínez, Carolina

    2017-01-01

    Puccinia horiana Hennings, the causal agent of chrysanthemum white rust, is a worldwide quarantine organism and one of the most important fungal pathogens of Chrysanthemum × morifolium cultivars, which are used for cut flowers and as potted plants in commercial production regions of the world. It was previously reported to be controlled by Lecanicillium lecanii, Cladosporium sphaerospermum, C. uredinicola and Aphanocladium album, due to their antagonistic and hyperparasitic effects. We report novel antagonist species on Puccinia horiana. Fungi isolated from rust pustules in a commercial greenhouse from Villa Guerrero, México, were identified as Cladosporium cladosporioides and Cladosporium pseudocladosporioides based upon molecular analysis and morphological characters. The antagonism of C. cladosporioides and C. pseudocladosporioides on chrysanthemum white rust was studied using light and electron microscopy in vitro at the host/parasite interface. Cladosporium cladosporioides and C. pseudocladosporioides grew towards the white rust teliospores and colonized the sporogenous cells, but no direct penetration of teliospores was observed; however, the structure and cytoplasm of teliospores were altered. The two Cladosporium spp. were able to grow on media containing laminarin, but not when chitin was used as the sole carbon source; these results suggest that they are able to produce glucanases. Results from the study indicate that both Cladosporium species had potential as biological control agents of chrysanthemum white rust.

  3. Cladosporium cladosporioides and Cladosporium pseudocladosporioides as potential new fungal antagonists of Puccinia horiana Henn., the causal agent of chrysanthemum white rust

    PubMed Central

    Guevara-Fefer, Patricia; Márquez-Guzmán, G. Judith; Pérez-Martínez, Carolina

    2017-01-01

    Puccinia horiana Hennings, the causal agent of chrysanthemum white rust, is a worldwide quarantine organism and one of the most important fungal pathogens of Chrysanthemum × morifolium cultivars, which are used for cut flowers and as potted plants in commercial production regions of the world. It was previously reported to be controlled by Lecanicillium lecanii, Cladosporium sphaerospermum, C. uredinicola and Aphanocladium album, due to their antagonistic and hyperparasitic effects. We report novel antagonist species on Puccinia horiana. Fungi isolated from rust pustules in a commercial greenhouse from Villa Guerrero, México, were identified as Cladosporium cladosporioides and Cladosporium pseudocladosporioides based upon molecular analysis and morphological characters. The antagonism of C. cladosporioides and C. pseudocladosporioides on chrysanthemum white rust was studied using light and electron microscopy in vitro at the host/parasite interface. Cladosporium cladosporioides and C. pseudocladosporioides grew towards the white rust teliospores and colonized the sporogenous cells, but no direct penetration of teliospores was observed; however, the structure and cytoplasm of teliospores were altered. The two Cladosporium spp. were able to grow on media containing laminarin, but not when chitin was used as the sole carbon source; these results suggest that they are able to produce glucanases. Results from the study indicate that both Cladosporium species had potential as biological control agents of chrysanthemum white rust. PMID:28141830

  4. Search for Physiological Substrates of Protein Tyrosine Phosphatase Epsilon in Mammary Tumor Cell Lines

    DTIC Science & Technology

    2000-12-01

    PTPe. 7. Reportable Outcomes: Manuscripts: 1. Peretz, A*., Gil-Henn, H*., Sobko, A., Shinder, V., Attali , B and Elson, A. (2000) - Hypomyelination and...contributing first authors). (listed as in preparation in previous report). 2. Tiran, Z., Peretz, A., Gil-Henn, H., Attali , B. and Elson, A. - Tyrosine 124 of...myelination of peripheral nerves in early post- natal mice. 21 Ari Elson, Bernard Attali , Asher Peretz, Hava Gil-Henn, Alex Sobko, and Vera Shinder. (Oral

  5. Evaluation and Validation (E & V) Team Public Report. Volume 3

    DTIC Science & Technology

    1987-09-01

    the host, Marlow Henne , of the Harris Corporation. Ray Szymanski welcomed the team and introduced the new people: - LCDR Philip Myers from the Ada...3.0 FRIDAY, 6 DECEMBER 1985 3.1 Introductions Chairperson Raymond Szymanski reopened the general session. Marlow Henne introduced Miriam Martinez...01821 Melbourne, FL 32936 Harto, Debra L. Hazle, Marlene AFATL/DLCM Mitre Corp. Eglin AFB, FL 32542 Burlington Rd. Bedford, MA 01730 Henne , Marlow

  6. Nano Materials

    DTIC Science & Technology

    2007-03-01

    Nano Materials Henne van Heeren enablingMNT Drakensteynlaan 34 3319 RG Dordrecht The Netherlands Henne@enablingMNT.com Introduction... micro sized particles. Nanotubes From a Mancef patent investigation it was learned that carbon nanotechnology (mainly nanotubes, but also...for high purity nanotubes. RTO-EN-AVT-129bis 3 - 1 van Heeren, H. (2007) Nano Materials. In Nanotechnology Aerospace Applications

  7. Hermite Functional Link Neural Network for Solving the Van der Pol-Duffing Oscillator Equation.

    PubMed

    Mall, Susmita; Chakraverty, S

    2016-08-01

    Hermite polynomial-based functional link artificial neural network (FLANN) is proposed here to solve the Van der Pol-Duffing oscillator equation. A single-layer hermite neural network (HeNN) model is used, where a hidden layer is replaced by expansion block of input pattern using Hermite orthogonal polynomials. A feedforward neural network model with the unsupervised error backpropagation principle is used for modifying the network parameters and minimizing the computed error function. The Van der Pol-Duffing and Duffing oscillator equations may not be solved exactly. Here, approximate solutions of these types of equations have been obtained by applying the HeNN model for the first time. Three mathematical example problems and two real-life application problems of Van der Pol-Duffing oscillator equation, extracting the features of early mechanical failure signal and weak signal detection problems, are solved using the proposed HeNN method. HeNN approximate solutions have been compared with results obtained by the well known Runge-Kutta method. Computed results are depicted in term of graphs. After training the HeNN model, we may use it as a black box to get numerical results at any arbitrary point in the domain. Thus, the proposed HeNN method is efficient. The results reveal that this method is reliable and can be applied to other nonlinear problems too.

  8. New description of the four-body breakup reaction

    SciTech Connect

    Matsumoto, Takuma; Kato, Kiyoshi; Yahiro, Masanobu

    2010-11-15

    We present a novel method of smoothing discrete breakup cross sections calculated by the method of continuum-discretized coupled channels. The smoothing method based on the complex scaling method is tested with success for a {sup 58}Ni(d,pn) reaction at 80 MeV as an example of three-body breakup reactions and applied to a {sup 12}C({sup 6}He,nn {sup 4}He) reaction at 229.8 MeV as an example of four-body breakup reactions. Fast convergence of the breakup cross section with respect to extending the model space is confirmed. The method is also applied to {sup 12}C({sup 6}He,nn {sup 4}He) and {sup 208}Pb({sup 6}He,nn {sup 4}He) reactions at 240 MeV/A and compared with the experimental data.

  9. Preventing PTSD: A Randomized Controlled Trial of Brief Anxiety Reducation Treatment for Acute Trauma (ARTAT). Addendum

    DTIC Science & Technology

    2013-08-01

    VA health care. Journal of American Medical Association. 2009 Aug; 302: 489-492. Samuelson , K.W., Neylan, T.C., Lenoci, M., Metzler, T.J...Therapy. 2007 Jan; 45(1): 39-47. 2006 Neylan TC, Lenoci M, Samuelson KW, Metzler TJ, Henn-Haase C, Hierholzer RW, Lindley SE, Otte C, Schoenfeld...of Nervous and Mental Disease. 2006 Nov; 194(11): 853-8. Samuelson KW, Neylan TC, Metzler TJ, Lenoci M, Rothlind J, Henn-Haase C, Choucroun G

  10. Effectiveness of Cognitive, Exposure, and Skills Group Manualized Treatments in OIF/OEF Female Veterans

    DTIC Science & Technology

    2014-04-01

    weaker processing speed ( Samuelson et al., 2006; Aupperle et al., 2012a) and executive functions including set switching, response inhibition, or...Corporation. Samuelson , K. W., Neylan, T. C., Metzler, T. J., Lenoci, M., Rothlind, J., Henn-Haase, C. et al. (2006). Neuropsychological

  11. Genetics and Mapping of Seedling Resistance to Ug99 Stem Rust in the Winter Wheat Cultivar Triumph 64 and Differentiation of SrTmp, SrCad, and Sr42

    USDA-ARS?s Scientific Manuscript database

    Stem rust, caused by the fungus Puccinia graminis f. sp. tritici Eriks. & E. Henn. (Pgt), is an important disease of wheat that can be controlled by deploying effective stem rust resistance (Sr) genes. The emergence of virulent Pgt races in Africa, namely Ug99 and its variants, has stimulated the se...

  12. Marine Viral Pathogens.

    DTIC Science & Technology

    2007-11-02

    toxin producing microalgae (Raphidophyceae). Although we have not definitively shown that the pathogen is viral, it has many characteristics that...Society America, Miami, FL, June 1994. 40.Hennes, K.P. and C.A. Suttle. 1994. The use of cyanine dyes for quantifying free viruses in natural water

  13. Evidence for systemic infection by Puccinia horiana, causal agent of Chrysanthemum White Rust, in Chrysanthemum

    USDA-ARS?s Scientific Manuscript database

    PUCCINIA HORIANA Henn., causal agent of the disease commonly known as Chrysanthemum white rust, is a quarantine-significant fungal pathogen of chrysanthemum in the United States (U.S.) and indigenous to Asia. The pathogen was believed to have been eradicated in the U.S. but recently re-appeared on s...

  14. Genetic mapping of resistance to the Ug99 race group of Puccinia graminis f. sp tritici in a spring wheat landrace CItr 4311

    USDA-ARS?s Scientific Manuscript database

    Wheat landrace CItr 4311 has seedling resistance to stem rust caused by Puccinia graminis f. sp tritici Eriks. & E. Henn (Pgt) race TTKSK and field resistance to the Ug99 race group. Parents, F1 seedlings, 121 doubled haploid (DH) lines, and 124 recombinant inbred lines (RILs) developed from a cross...

  15. Health Instruction Packages: Consumer--Nutrition and Health.

    ERIC Educational Resources Information Center

    Henn, Lisa; And Others

    These eight learning modules provide text, illustrations, and exercises on a variety of nutritional and dietetic topics. The first two modules were prepared by Lisa Henn to instruct older adults in the various food sources of caffeine and fiber and in the harmful effects of caffeine and the dietetic importance of fiber. The third module was…

  16. Guidance Protocol: Application of Nucleic Acid-Based Tools for Monitoring Monitored Natural Attenuation (MNA), Biostimulation, and Bioaugmentation at Chlorinated Solvent Sites

    DTIC Science & Technology

    2011-02-01

    By Carmen A. Lebrón (NAVFAC ESC) Dr. Erik Petrovskis (Geosyntec Consultants) Dr. Frank Löffler (University of Tennessee) Keith Henn (Tetra...Identification of Organic Ground Water Contaminants using Compound Specific Isotope Analysis, EPA/600/R-08/148. Fletcher, K. E., C. Cruz- Garcia , N. S

  17. Sequencing of an Anthracnose-resistant sorghum genotype and mapping of a major QTL reveal strong candidate genes for Anthracnose resistance

    USDA-ARS?s Scientific Manuscript database

    Anthracnose, caused by the fungal pathogen Colletotrichum sublineolum Henn. ex. Sacc. and Trotter 1913, is an economically damaging disease of sorghum [Sorghum bicolor (L.) Moench] in hot and humid production regions of the world. Control of anthracnose is almost exclusively through the use of genet...

  18. Discovery of a novel stem rust resistance allele in durum wheat that exhibits differential reactions to Ug99 isolates

    USDA-ARS?s Scientific Manuscript database

    Wheat stem rust, caused by Puccinia graminis f. sp. tritici Erikss. & E. Henn, can incur yield losses on susceptible cultivars of durum wheat, Triticum turgidum ssp. durum (Desf.) Husnot. Though several durum cultivars possess the stem rust resistance gene Sr13, additional genes in durum wheat effec...

  19. Technical Evaluation Report on the Fluid Dynamics Panel Symposium on Computational Methods for Aerodynamic Design (Inverse) and Optimization (Les Methodes de Calcul pour la Conception Aerodynamique (Methodes Inverses) et l’Optimisation)

    DTIC Science & Technology

    1990-04-01

    comnit6 du programme de cette reunion tient a remercier M. Preston Henne de la McDonnell Dougla, Corporation. Douglas Aircraft Company, pour avoir bien ...objective function such as drag, load distribution. etc. The purpose of the Specialists’ Meeting is to stimulate comunication on recent developments and

  20. Identification and validation of single nucleotide polymorphic markers linked to Ug99 stem rust resistance in spring wheat

    USDA-ARS?s Scientific Manuscript database

    Wheat stem rust (Puccinia graminis f. sp. tritici Eriks. and E. Henn.) is one of the most destructive diseases world-wide. Races belonging to Ug99 (or TTKSK) continue to cause crop losses in East Africa and threaten global wheat production. Developing and deploying wheat varieties with multiple race...

  1. Genetic mapping of stem rust resistance to Puccinia graminis f. sp. tritici race TRTTF in the Canadian wheat cultivar 'Harvest'

    USDA-ARS?s Scientific Manuscript database

    Stem rust, caused by Puccinia graminis Pers.:Pers. f. sp. tritici Eriks. & E. Henn.(Pgt), is a destructive disease of wheat that can be controlled by deploying effective stem rust resistance (Sr) genes. Highly virulent races of Pgt in Africa have been detected and characterized. These include race T...

  2. Sources of resistance to stem rust race Ug99 in spring wheat germplasm

    USDA-ARS?s Scientific Manuscript database

    Wheat stem rust (Puccinia graminis Pers.:Pers. f. sp. tritici Eriks & E. Henn.) race TTKSK (Ug99) with virulence to the majority of the world’s wheat (Triticum aestivum L.) varieties has spread from Uganda throughout eastern and southern Africa, Yemen, and Iran. The identification and spread of vari...

  3. Longevity of Puccinia horiana teliospores under various environmental conditions

    USDA-ARS?s Scientific Manuscript database

    Puccinia horiana Henn. is a quarantine-significant fungal pathogen and causal agent of chrysanthemum white rust (CWR). The pathogen and disease were first discovered in the United States in 1977 and quickly eradicated. During the early 1990s, CWR re-emerged on several instances, but in each instance...

  4. Molecular and cytogenetic characterization of wheat introgression lines carrying the stem rust resistance gene Sr39.

    USDA-ARS?s Scientific Manuscript database

    Stem rust, caused by Puccinia graminis Pers.:Pers. f.sp. tritici Eriks. and Henn., poses a serious threat to global wheat production because of the emergence of Pgt-TTKSK (Ug99). The TTKSK resistant gene Sr39 was derived from Aegilops speltoides through chromosome translocation. In this study, we ch...

  5. Evaluation of the Effectiveness of the Defense Systems Acquisition Review Council (DSARC). Volume II. Part 2. Appendices J through R.

    DTIC Science & Technology

    1983-04-04

    LTC Butler LTC Anderson ODCSOPS MG Richardson LTC McLeod Mr. Riente * ODCSLOG MG Nord Mr. Henne ODCS PER COL Neuberger * LTC Ganey FIGURE J13 Attendees...Volner COA Mr. Allen Mr. Hogan OTEA MG Becton COL Sebastian DCSPER BG Moore OCLL MAJ Tingle SRAO COL Balzhiser LTC Bertelkamp MAJ Lind OSA MAJ Benton

  6. Conference Proceedings of the International Association of School Librarianship.

    ERIC Educational Resources Information Center

    International Association of School Librarianship, Kalamazoo, MI.

    The 1976 International Association of School Librarianship conference focused on crucial issues in school library development and professional education. Complete texts of the keynote address, Crucial Issues in School Library Development and Professional Education by Frances Henne, and the following presentations are included: The School…

  7. Mapping resistance to the Ug99 race group of the stem rust pathogen in a spring wheat landrace

    USDA-ARS?s Scientific Manuscript database

    Wheat landrace PI 374670 has seedling and field resistance to stem rust caused by Puccinia graminis f. sp tritici Eriks. & E. Henn (Pgt) race TTKSK. To elucidate the inheritance of resistance, 216 BC1F2 families, 192 double haploid (DH) lines, and 185 recombinant inbred lines (RILs) were developed b...

  8. A Study of the Halogenation of Aliphatic Hydrocarbons and Derivatives Thereof

    DTIC Science & Technology

    1961-08-01

    Arlingt 12, Virginia. This report has been released to the Office of Technical Services, U. S. Department of Com- merce, Washington 25, D. C. for sale ...J.Amer.Chem.Soc., 1928, 50, 1427. 17. Fargher and Perkin, J.Chem.Soc., 1914, 1_0, 1353. 18. Henne, J.Amer.Chem.Soc., 1938, 60, 1569. 19. Edgell and

  9. "I'm New Here..." Making Friends, Staying Strong and Having a Fantastic First Year as a School Librarian

    ERIC Educational Resources Information Center

    Stenzel, Carolyn

    2015-01-01

    Carolyn Stenzel is the Library Department chair and Upper School librarian at the Holton-Arms School in Bethesda, Maryland. She is a member of AASL and is the Independent Schools Committee Chair for the Virginia Association of School Librarians. She was awarded the AASL Frances Henne Award in 2014. In this article she shares her experiences as a…

  10. Health Instruction Packages: Consumer--Nutrition and Health.

    ERIC Educational Resources Information Center

    Henn, Lisa; And Others

    These eight learning modules provide text, illustrations, and exercises on a variety of nutritional and dietetic topics. The first two modules were prepared by Lisa Henn to instruct older adults in the various food sources of caffeine and fiber and in the harmful effects of caffeine and the dietetic importance of fiber. The third module was…

  11. "I'm New Here..." Making Friends, Staying Strong and Having a Fantastic First Year as a School Librarian

    ERIC Educational Resources Information Center

    Stenzel, Carolyn

    2015-01-01

    Carolyn Stenzel is the Library Department chair and Upper School librarian at the Holton-Arms School in Bethesda, Maryland. She is a member of AASL and is the Independent Schools Committee Chair for the Virginia Association of School Librarians. She was awarded the AASL Frances Henne Award in 2014. In this article she shares her experiences as a…

  12. Zur Besetzung der Leerstellen von Valenztragern (The Occupation of the Empty Spaces of Valence Bearers)

    ERIC Educational Resources Information Center

    Sommerfeldt, Karl-Ernst

    1973-01-01

    Study of the linguistic means related to the occupation and non-occupation of Leerstellen'' (empty spaces) initiated by semantic and syntactic valence, as in the elliptical usage: Die Henne legt wieder. (Eier)'' (The hen is laying again. YeggsI). (RS)

  13. Zur Besetzung der Leerstellen von Valenztragern (The Occupation of the Empty Spaces of Valence Bearers)

    ERIC Educational Resources Information Center

    Sommerfeldt, Karl-Ernst

    1973-01-01

    Study of the linguistic means related to the occupation and non-occupation of Leerstellen'' (empty spaces) initiated by semantic and syntactic valence, as in the elliptical usage: Die Henne legt wieder. (Eier)'' (The hen is laying again. YeggsI). (RS)

  14. Characterization of stem rust resistance in wheat cultivar 'Gage'

    USDA-ARS?s Scientific Manuscript database

    Wheat (Triticum spp.) stem rust, caused by Puccinia graminis f. sp. tritici Eriks. & E. Henn. (Pgt), re-emerged as a devastating disease of wheat because of virulent race Ug99 (TTKSK). Many bread wheat (T. aestivum L.) cultivars grown in North America are susceptible to Ug99 or its derivative races ...

  15. Genotyping-by-sequencing to re-map QTL for type II Fusarium head blight and leaf rust resistance in a wheat-tall wheatgrass introgression recombinant inbred population

    USDA-ARS?s Scientific Manuscript database

    Fusarium graminaerum (Fusarium head blight; FHB) and Puccinia recondita Roberge ex Desmaz. f. sp. tritici Eriks. & E. Henn (leaf rust; LR) are two major fungal pathogens threatening the wheat crop; consequently identifying resistance genes from various sources is always of importance to wheat breede...

  16. Development of COS-SNP and HRM markers for cost efficient and reliable haplotype-based detection of Lr14a in durum wheat (Triticum durum Desf.)

    USDA-ARS?s Scientific Manuscript database

    Leaf rust (Puccinia triticina Eriks. & Henn.) is a major disease affecting durum wheat production. The Lr14a leaf rust resistant gene present in the durum wheat cv. Creso and its derivative Colosseo is one of the best characterized leaf rust resistance sources presently deployed in durum wheat breed...

  17. A new 2DS·2RL Robertsonian translocation transfers Sr59 resistance to stem rust into wheat

    USDA-ARS?s Scientific Manuscript database

    Emerging new races of the wheat stem rust pathogen Puccinia graminis f. sp. tritici Eriks. & E. Henn, especially the Ug99 race group threaten global wheat, Triticum aestivum L., production. Screening of a collection of wheat-rye, Secale cereale L., chromosome substitution lines developed at the Swed...

  18. Use of Nucleic Acid-Based Tools for Monitoring Biostimulation and Bioaugmentation

    DTIC Science & Technology

    2011-01-01

    JANUARY 2011 Carmen Lebrόn NAVFAC ESC Erik Petrovskis Geosyntec Consultants Frank Löffler University of Tennessee Keith Henn Tetra Tech...ATTENUATION (MNA), BIOSTIMULATION AND BIOAUGMENTATION AT CHLORINATED SOLVENT SITES ESTCP Project ER0518 NAVFAC ESC By Carmen A. Lebrón (NAVFAC...R-08/148. Fletcher, K. E., C. Cruz- Garcia , N. S. Ramaswamy, J. Costanza, K. D. Pennell, and F. E. Löffler. 2010. Effects of elevated temperatures

  19. Taxonomic and phylogenetic re-evaluation of Mycena illuminans.

    PubMed

    Chew, Audrey L C; Tan, Yee-Shin; Desjardin, Dennis E; Musa, Md Yusoff; Sabaratnam, Vikineswary

    2013-01-01

    Mycena illuminans Henn. is described and re-evaluated based on recently collected material from peninsular Malaysia, providing comprehensive descriptions, illustrations and photographs. In addition to morphological data, axenic monokaryon and dikaryon cultures were established to provide data on culture morphology and the mating system of the species. Molecular sequences data from the nuclear large subunit (LSU) gene also are presented, confirming that M. illuminans is not a synonym of Mycena chlorophos.

  20. Demonstration of CBR Modeling and Simulation Tool (CBRSim) Capabilities. Installation Technology Transfer Program

    DTIC Science & Technology

    2009-04-01

    nocturnal boundary layer: Theory compared with Cabauw observations. Boundary Layer Meteorology 20:3-17. Sykes, R.I., S.F. Parker, D.S. Henn, C.P. Cerasoli...as in cumulus or stratocumulus clouds. Sun not visible through clouded areas. Mid Level 2000 – 5000 White, or light grey colored clouds, sometimes...available at this time. The Damage Category severity drop-down box lets the user chose between Light , Moderate, Severe, or Total severity of damage

  1. On the stability of cationic complexes of neon with helium--solving an experimental discrepancy.

    PubMed

    Bartl, Peter; Denifl, Stephan; Scheier, Paul; Echt, Olof

    2013-10-21

    Helium nanodroplets are doped with neon and ionized by electrons. The size-dependence of the ion abundance of HenNex(+), identified in high-resolution mass spectra, is deduced for complexes containing up to seven neon atoms and dozens of helium atoms. Particularly stable ions are inferred from anomalies in the abundance distributions. Two pronounced anomalies at n = 11 and 13 in the HenNe(+) series confirm drift-tube data reported by Kojima et al. [T. M. Kojima et al., Z. Phys. D, 1992, 22, 645]. The discrepancy with previously published spectra of neon-doped helium droplets, which did not reveal any abundance anomalies [T. Ruchti et al., J. Chem. Phys., 1998, 109, 10679-10687; C. A. Brindle et al., J. Chem. Phys., 2005, 123, 064312], is most likely due to limited mass resolution, which precluded unambiguous analysis of contributions from different ions with identical nominal mass. However, calculated dissociation energies of HenNe(+) reported so far do not correlate with the present data, possibly because of challenges in correctly treating the linear, asymmetric [He-Ne-He](+) ionic core in HenNe(+). Anomalies identified in the distributions of HenNex(+) for x > 1, including prominent ones at He12Ne2(+) and He14Ne2(+), may help to better understand solvation of Ne(+) and Nex(+) in helium.

  2. Current Problems in Turbomachinery Fluid Dynamics.

    DTIC Science & Technology

    1981-11-30

    C.F.: An Effective Algorithm for Shock-Free Wing Design. AIAA paper 81-1236, 1981. 1. 3. Carlson, L.A.: Transonic Airfoil Analysis and Design Using...Cartesian Coordinates. Journal of Aircraft, 13, pp 349-356, May 1976. 1. 4. Henne, P.A.: An Inverse Transonic Wing Design Method. AIAA paper 80-0330...Panel meeting on Integration of Computers and Wind Tunnel Testing, September 24-25, 1980, Chattanooga, TN. E. M. Greitzer, "The Stability of Pumping

  3. On hydrogen-like bound states in N = 4 super Yang-Mills

    NASA Astrophysics Data System (ADS)

    Sakata, Yusuke; Schneider, Robin; Tachikawa, Yuji; Yamaura, Takemasa

    2017-09-01

    Using relativistic quantum mechanics, we study the spectrum of a non-BPS two-particle bound state in the massive phase of N = 4 super Yang-Mills, in the limit when one of the particles is infinitely heavier than the other. We find that the spectrum shows the exact n 2 degeneracy for each principal quantum number n, just as in the strict non-relativistic limit. This is in line with the findings of Caron-Huot and Henn, who studied the same system in the large N limit with the technique of integrability and the dual conformal symmetry.

  4. Analysis of Waterway Systems.

    DTIC Science & Technology

    1972-09-01

    9RANDON ROAD 5. Ottawa LOD 6. Peru 3. 7 Henne pin S 8. Peoria DRESDEN ISLAND LSD 9. Pekin /0. Havana 4 I I. Grafton- MARSEILLES ŜD Florence 12. Wood...N. R. and Smith , H. Applied Regression Analysis. Wiley, New York, N. Y., 1966. 29. Verity, W. and Kautz, B. Pearson Product Moment Correlation...Ox- ford Univ. Press, New York, N. Y., 1951. 44. Isard, W. Methods of Regional Analysis. The M.I.T. Press, Cambridge, Mass., 1960. 45. Adams , R. B. An

  5. Thermal-Induced Denaturation and Aggregation Behavior of Lysozyme and Bovine Serum Albumin: a Thermodynamic and Structural Study

    NASA Astrophysics Data System (ADS)

    Perez, Aline Sanches; Oliveira, Cristiano Luis Pinto

    2017-10-01

    Solution studies permit a direct investigation of the particles on a well-defined environment. Fluorescence, circular dichroism, scattering, and calorimetry provide, individually, very important information among the protein structure, overall shape, and thermodynamic equilibrium. In this work, a combination of these techniques is presented for the study of denaturation induced by temperature of two well-known proteins, Henn Egg lysozyme and bovine serum albumin. A detailed thermodynamic and structural investigation is shown for these proteins, providing interesting information on the thermal-induced changes in the protein structure and aggregation behavior.

  6. epsilon : A tool to find a canonical basis of master integrals

    NASA Astrophysics Data System (ADS)

    Prausa, Mario

    2017-10-01

    In 2013, Henn proposed a special basis for a certain class of master integrals, which are expressible in terms of iterated integrals. In this basis, the master integrals obey a differential equation, where the right hand side is proportional to ɛ in d = 4 - 2 ɛ space-time dimensions. An algorithmic approach to find such a basis was found by Lee. We present the tool epsilon, an efficient implementation of Lee's algorithm based on the Fermat computer algebra system as computational back end.

  7. Beyond Depression: Towards a Process-Based Approach to Research, Diagnosis, and Treatment

    PubMed Central

    Forgeard, Marie J. C.; Haigh, Emily A. P.; Beck, Aaron T.; Davidson, Richard J.; Henn, Fritz A.; Maier, Steven F.; Mayberg, Helen S.; Seligman, Martin E. P.

    2012-01-01

    Despite decades of research on the etiology and treatment of depression, a significant proportion of the population is affected by the disorder, fails to respond to treatment and is plagued by relapse. Six prominent scientists, Aaron Beck, Richard Davidson, Fritz Henn, Steven Maier, Helen Mayberg, and Martin Seligman, gathered to discuss the current state of scientific knowledge on depression, and in particular on the basic neurobiological and psychopathological processes at play in the disorder. These general themes were addressed: 1) the relevance of learned helplessness as a basic process involved in the development of depression; 2) the limitations of our current taxonomy of psychological disorders; 3) the need to work towards a psychobiological process-based taxonomy; and 4) the clinical implications of implementing such a process-based taxonomy. PMID:22509072

  8. Evaluating four-loop conformal Feynman integrals by D-dimensional differential equations

    NASA Astrophysics Data System (ADS)

    Eden, Burkhard; Smirnov, Vladimir A.

    2016-10-01

    We evaluate a four-loop conformal integral, i.e. an integral over four four-dimensional coordinates, by turning to its dimensionally regularized version and applying differential equations for the set of the corresponding 213 master integrals. To solve these linear differential equations we follow the strategy suggested by Henn and switch to a uniformly transcendental basis of master integrals. We find a solution to these equations up to weight eight in terms of multiple polylogarithms. Further, we present an analytical result for the given four-loop conformal integral considered in four-dimensional space-time in terms of single-valued harmonic polylogarithms. As a by-product, we obtain analytical results for all the other 212 master integrals within dimensional regularization, i.e. considered in D dimensions.

  9. Vibrational Bound States of the He2Ne+ Cation

    NASA Astrophysics Data System (ADS)

    Zúniga, José; Bastida, Adolfo; Requena, Alberto; Halberstadt, Nadine; Beswick, J. Alberto; Janda, Kenneth C.

    2009-10-01

    The vibrational bound states of the He2Ne+ complex have been determined using a potential energy surface previously published by Seong et al. [J. Chem. Phys. 2004, 120, 7456]. The calculation was performed by sequential diagonalization-truncation techniques in a discrete variable representation using Radau hyperspherical coordinates. There are 52 bound levels. The ground state has an energy of 605.3 cm-1 above the absolute minimum and lies about half way to dissociation. The evaporation energy of one He atom is equal to 866.1 cm-1. Only four levels have energies below the classical energy for dissociation, and all the other 48 states are bound by the zero-point energy of the HeNe+ fragment. The implications of the properties of the eigenvalue spectrum and of the corresponding wave functions on the vibrational relaxation dynamics and infrared spectra of HeNNe+ clusters is discussed.

  10. Quantum Monte Carlo study of helium clusters doped with nitrous oxide: quantum solvation and rotational dynamics.

    PubMed

    Moroni, Saverio; Blinov, Nicholas; Roy, Pierre-Nicholas

    2004-08-22

    Dynamical and structural properties of small (4)He(N)-N(2)O complexes have been analyzed using ground-state and finite-temperature Monte Carlo simulations. The effective rotational constants resulting from the ground-state calculations are in excellent agreement with the results of a recent spectroscopic study [Y. Xu et al., Phys. Rev. Lett. 91, 163401 (2003)]. After an initial decrease for cluster sizes up to N=8, the rotational constant increases, signaling a transition from a molecular complex to a quantum-solvated system. Such a turnaround is not present in the rotational constants extracted from the finite-temperature Monte Carlo calculations, performed for Boltzmann statistics, thus highlighting the importance of exchange effects to explain the decoupling between a solvated dopant and the helium motion.

  11. Beyond Depression: Towards a Process-Based Approach to Research, Diagnosis, and Treatment.

    PubMed

    Forgeard, Marie J C; Haigh, Emily A P; Beck, Aaron T; Davidson, Richard J; Henn, Fritz A; Maier, Steven F; Mayberg, Helen S; Seligman, Martin E P

    2011-12-01

    Despite decades of research on the etiology and treatment of depression, a significant proportion of the population is affected by the disorder, fails to respond to treatment and is plagued by relapse. Six prominent scientists, Aaron Beck, Richard Davidson, Fritz Henn, Steven Maier, Helen Mayberg, and Martin Seligman, gathered to discuss the current state of scientific knowledge on depression, and in particular on the basic neurobiological and psychopathological processes at play in the disorder. These general themes were addressed: 1) the relevance of learned helplessness as a basic process involved in the development of depression; 2) the limitations of our current taxonomy of psychological disorders; 3) the need to work towards a psychobiological process-based taxonomy; and 4) the clinical implications of implementing such a process-based taxonomy.

  12. Protein Expression Profile of an Environmentally Important Bacterial Strain: the Chromate Response of Arthrobacter Species Strain FB24

    SciTech Connect

    Henne, Kristene L.; Turse, Joshua E.; Nakatsu, C. H.; Konopka, Allan

    2011-05-03

    The global proteomic response of Arthrobacter sp. strain FB24 to different levels of chromate stress was evaluated with both two-dimensional gel electrophoresis (2-DGE) and liquid chromatography coupled to tandem mass spectrometry (LC/LC-MS/MS) [Henne et al. 2009b]. Proteome coverage of 22% and 71% was obtained with 2-DGE and LC/LC-MS/MS, respectively. The strong response of strain FB24 to chromate suggests a condition of sulfur limitation, which could be driven by competition for the sulfate transporter by the structurally similar chromate ion. Additionally, the involvement of genes hypothesized to be directly involved in chromate resistance in strain FB24 was supported at the protein level.

  13. A comparison of design variables for control theory based airfoil optimization

    NASA Technical Reports Server (NTRS)

    Reuther, James; Jameson, Antony

    1995-01-01

    This paper describes the implementation of optimization techniques based on control theory for airfoil design. In our previous work in the area it was shown that control theory could be employed to devise effective optimization procedures for two-dimensional profiles by using either the potential flow or the Euler equations with either a conformal mapping or a general coordinate system. We have also explored three-dimensional extensions of these formulations recently. The goal of our present work is to demonstrate the versatility of the control theory approach by designing airfoils using both Hicks-Henne functions and B-spline control points as design variables. The research also demonstrates that the parameterization of the design space is an open question in aerodynamic design.

  14. Head and eye movements in rats with pontine reticular lesions in comparison with primates: a scientific memoir and a fresh look at some old and 'new' data.

    PubMed

    Sirkin, David W

    2012-06-01

    The author recounts the process of discovery in Philip Teitelbaum's laboratory, which began with the observation of vestibular head stabilization in a rat with brainstem lesions, of the essential roles of the pontine reticular formation (PRF) in the rat in ipsiversive head as well as eye movements. The PRF in the rat appears to be in the pathways for most direction-changing movements of the eyes and head, leaving vestibular and optokinetic stabilizing movements intact and uninterrupted. The author postulates that a response to the sliding of feet or paws, or a "substrate-kinetic reflex," works together with vestibular and optokinetic reactions to stabilize an animal's directions of gaze and locomotion on the ground. Previously unpublished data are presented from later observations and recordings of rats with kainic acid lesions in the PRF, which support the conclusion that neurons in the PRF are essential for head as well as eye movements in the rat. In contrast, Volker Henn observed no obvious loss of head movements in monkeys that had a loss of fast eye movements from kainic acid lesions of the PRF. The author and others observed that quick phases of head nystagmus develop some time after quick phases of ocular nystagmus in normal human infants; in other words, after the PRF is functioning for eye movements. The author concludes that in primates, the pathway for head movements through the PRF has been replaced by a newer pathway, leaving certain PRF regions to be devoted to mediating only eye movements.

  15. Using a shock control bump to improve the performance of an axial compressor blade section

    NASA Astrophysics Data System (ADS)

    Mazaheri, K.; Khatibirad, S.

    2017-03-01

    Here, we use numerical analysis to study the effects of a shock control bump (SCB) on the performance of a transonic axial compressor blade section and to optimize its shape and location to improve the compressor performance. A section of the NASA rotor 67 blade is used for this study. Two Bézier curves, each consisting of seven control points, are used to model the suction and pressure surfaces of the blade section. The SCB is modeled with the Hicks-Henne function and, using five design parameters, is added to the suction side. The total pressure loss through a cascade of blade sections is selected as the cost function. A continuous adjoint optimization method is used along with a RANS solver to find a new blade section shape. A grid independence study is performed, and all optimization and flow solver algorithms are validated. Two single-point optimizations are performed in the design condition and in an off-design condition. It is shown that both optimized shapes have overall better performance for both on-design and off-design conditions. An analysis is given regarding how the SCB has changed the wave structure between blade sections resulting in a more favorable flow pattern.

  16. Three-cluster dynamics within an ab initio framework

    DOE PAGES

    Quaglioni, Sofia; Romero-Redondo, Carolina; Navratil, Petr

    2013-09-26

    In this study, we introduce a fully antisymmetrized treatment of three-cluster dynamics within the ab initio framework of the no-core shell model/resonating-group method. Energy-independent nonlocal interactions among the three nuclear fragments are obtained from realistic nucleon-nucleon interactions and consistent ab initio many-body wave functions of the clusters. The three-cluster Schrödinger equation is solved with bound-state boundary conditions by means of the hyperspherical-harmonic method on a Lagrange mesh. We discuss the formalism in detail and give algebraic expressions for systems of two single nucleons plus a nucleus. Using a soft similarity-renormalization-group evolved chiral nucleon-nucleon potential, we apply the method to amore » 4He+n+n description of 6He and compare the results to experiment and to a six-body diagonalization of the Hamiltonian performed within the harmonic-oscillator expansions of the no-core shell model. Differences between the two calculations provide a measure of core (4He) polarization effects.« less

  17. Ionization and Electron Transfer in p-He^+ and Other Collisions

    NASA Astrophysics Data System (ADS)

    Winter, T. G.; Winter, J. R.

    2000-06-01

    Recently,(T. G. Winter and J. R. Winter, Phys. Rev. A (submitted).) cross sections have been determined primarily for ionization in p-He^+(ns) collisions with n = 1, 2, or 3 at proton energies of 200-2000 keV using the coupled-Sturmian-pseudostate approach. These processes are relevant to an understanding of the feasibility of muon-catalyzed nuclear fusion.(J. S. Cohen, Phys. Rev. Lett. 58), 1407 (1987); J. S. Cohen (private communication). Detailed convergence studies are presented, and the coupled-state results for n = 1, 2 are compared with others.(A. Henne, H. J. Lüdde, A. Toepfer, T. Gluth, and R. M. Dreizler, J. Phys. B 26), 3815 (1993); L. F. Errea and P. Sánchez, J. Phys. B 27, 3677 (1994); K. A. Hall, J. F. Reading, and A. L. Ford, J. Phys. B 27, 5257 (1994). For comparison, and to include neglected higher partial waves, first-Born cross sections are also reported. A correction has been applied to the uneven distribution of Sturmian-generated energies at the ionization threshold, yielding cross sections much more stable with respect to basis size. Other one-electron collisional systems will also be considered.

  18. New radiocarbon dates and the herder occupation at Kasteelberg B, South Africa [NEW RADIOCARBON DATES SHED LIGHT ON THE HERDER OCCUPATION SEQUENCE AT KASTEELBERG B, SOUTH AFRICA

    DOE PAGES

    Sadr, Karim; Bousman, C. Britt; Brown, Thomas A.; ...

    2017-09-20

    In this paper, we present that five centuries ago, the first European mariners rounding the Cape of Good Hope encountered Khoekhoe-speaking people who occasionally supplied beef and mutton in return for iron, tobacco, alcohol and other exotic goods. The origin of their livestock, as well as of the Khoekhoen themselves, continues to intrigue academics. We now know the first livestock were introduced from the north and that they reached southern Africa over 2000 years ago (Robbins et al. 2005; Pleurdeau et al. 2012). Y-chromosome E3b1f-M293 (Henn et al. 2008) and lactase persistence allele -14010*C (Macholdt et al. 2014) indicate thatmore » some Khoe-speakers are distantly related through the male lineage to pastoralists in East Africa (Barbieri et al. 2014); a conclusion that is supported by linguists who locate the origins of proto-Khoe languages in that part of the continent (e.g., Güldemann 2008). But it remains unclear whether the earliest livestock in southern Africa arrived with immigrant Khoespeakers, or whether the Khoe-speakers arrived later: the first livestock may have been traded down the line or infiltrated among southern African San hunter-gatherers (e.g., Sadr 2015).« less

  19. Route to Quantum Turbulence in Trapped Bose-Einstein Condensates

    NASA Astrophysics Data System (ADS)

    Allen, A.; Parker, Nick; Proukakis, Nick; Barenghi, Carlo

    2013-05-01

    Turbulence in superfluid Helium has been the subject of many experimental and theoretical investigations (for review see e.g. L. Skrbek and K.R. Sreenivasan, Phys. of Fluids 24, 011301 (2012)) and recently, experimentalists have been able to visualize vortex lines, reconnection events and Kelvin waves (E. Fonda et al. arXiv:1210.5194). Weakly interacting Bose-Einstein condensates however, present a unique opportunity to resolve the structure of vortices and in turn study the dynamics of a vortex tangle (as has recently been created in an atomic cloud E.A.L. Henn et al. Phys. Rev. Lett 103, 04301 (2009)). We investigate ways of generating turbulence in atomic systems by numerically stirring the condensate using a Gaussian `spoon' (analogous to a laser beam in the experiments), and study the isotropy of the resulting vortex tangle depending on whether the path the spoon stirs is circular or random. We model the system using the Gross-Pitaevskii Equation and extend our analysis to finite temperature using the Zaremba-Nikuni-Griffin (ZNG) formalism (E. Zaremba et al. Jour. Low Temp. Phys. 116, 277 (1999)), whereby the full dynamics of the noncondensate atoms are described by a semiclassical Boltzmann equation.

  20. Antifungal Activities of Crude Extractum from Camellia semiserrata Chi (Nanshancha) Seed Cake Against Colletotrichum musae, Colletotrichum gloeosporioides and Penicillium italicum in vitro and in vivo Fruit Test

    PubMed Central

    Meng, Xiangchun; Li, Jun; Bi, Fangcheng; Zhu, Lixue; Ma, Zhiyu

    2015-01-01

    Antifungal activities of crude extractum of Nanshancha Seed Cake (NSC), to inactivate postharvest pathogens were investigated. Highest inhibitory rate was found against C. musae, C. gloeosporioides and C. papaya P.Henn, which was much stronger than that by tea saponin. Compared to tea saponin, effects of NSC extractum was relatively weak and similar on C. gloeosporioides Penzig and P. italicum. In an in vivo study, best controlling effects by NSC extractum was found with banana anthracnose disease development, which showed no inhibitory effects by tea saponin. NSC extractum controlled in vitro C. musae growth through directly inhibiting germination rate and germ tube elongation, and causing distortation, rupture and indentation of C. musae mycelium. In banana fruit subject to C. musae inoculation, higher PAL, POD, GLU and CHT activity was observed in banana fruit treated with crude NSC extractum than that of water control fruits. Current study proved the best controlling effects of crude NSC extractum in C. musae in vitro and in vivo development, which through direct inhibition of C. musae growth and increasing defense system of the banana fruit. PMID:26674222

  1. Large-eddy simulation and Lagrangian stochastic modeling of passive scalar dispersion in a turbulent boundary layer

    NASA Astrophysics Data System (ADS)

    Vinkovic, Ivana; Aguirre, Cesar; Simoëns, Serge

    A large-eddy simulation (LES) with the dynamic Smagorinsky Germano subgrid scale (SGS) model is used to study the passive scalar dispersion in a turbulent boundary layer. Instead of resolving the passive scalar transport equation, fluid particles containing scalar are tracked in a Lagrangian way. The Lagrangian velocity of each fluid particle is considered to have a large-scale part (directly computed by the LES) and a small-scale part. The movement of fluid elements containing scalar at a subgrid level is given by a three-dimensional Langevin model. The stochastic model is written in terms of SGS statistics at a mesh level. The results of the LES are compared with the wind-tunnel experiments of Fackrell and Robins (1982, Journal of Fluid Mechanics, 117, 1 26) and with the LES results of Sykes and Henn (1992, Atmospheric Environment A, 26, 3127 3144), who used a completely Eulerian approach with a non-dynamic SGS model. Our simulations predict the quantitative features of the experiments of Fackrell and Robins (1982, Journal Fluid Mechanics, 117, 1 26). Moreover, by using the Lagrangian approach, scalar fluxes are computed with no additional modeling assumptions and show good agreement with the experimental data. A classic mean-gradient model of the scalar flux is calculated from the computed results. The agreement between the directly computed fluxes and the classic mean-gradient model calculation is remarkable.

  2. Identification and validation of single nucleotide polymorphic markers linked to Ug99 stem rust resistance in spring wheat

    PubMed Central

    Chao, Shiaoman; Singh, Ravi P.; Sorrells, Mark E.

    2017-01-01

    Wheat stem rust (Puccinia graminis f. sp. tritici Eriks. and E. Henn.) is one of the most destructive diseases world-wide. Races belonging to Ug99 (or TTKSK) continue to cause crop losses in East Africa and threaten global wheat production. Developing and deploying wheat varieties with multiple race-specific genes or complex adult plant resistance is necessary to achieve durability. In the present study, we applied genome-wide association studies (GWAS) for identifying loci associated with the Ug99 stem rust resistance (SR) in a panel of wheat lines developed at the International Maize and Wheat Improvement Center (CIMMYT). Genotyping was carried out using the wheat 9K iSelect single nucleotide polymorphism (SNP) chip. Phenotyping was done in the field in Kenya by infection of Puccinia graminis f. sp. tritici race TTKST, the Sr24-virulent variant of Ug99. Marker-trait association identified 12 SNP markers significantly associated with resistance. Among them, 7 were mapped on five chromosomes. Markers located on chromosomes 4A and 4B overlapped with the location of the Ug99 resistance genes SrND643 and Sr37, respectively. Markers identified on 7DL were collocated with Sr25. Additional significant markers were located in the regions where no Sr gene has been reported. The chromosome location for five of the SNP markers was unknown. A BLASTN search of the NCBI database using the flanking sequences of the SNPs associated with Ug99 resistance revealed that several markers were linked to plant disease resistance analogues, while others were linked to regulatory factors or metabolic enzymes. A KASP (Kompetitive Allele Specific PCR) assay was used for validating six marker loci linked to genes with resistance to Ug99. Of those, four co-segregated with the Sr25-pathotypes while the rest identified unknown resistance genes. With further investigation, these markers can be used for marker-assisted selection in breeding for Ug99 stem rust resistance in wheat. PMID:28241006

  3. The genus Cladosporium

    PubMed Central

    Bensch, K.; Braun, U.; Groenewald, J.Z.; Crous, P.W.

    2012-01-01

    A monographic revision of the hyphomycete genus Cladosporium s. lat. (Cladosporiaceae, Capnodiales) is presented. It includes a detailed historic overview of Cladosporium and allied genera, with notes on their phylogeny, systematics and ecology. True species of Cladosporium s. str. (anamorphs of Davidiella), are characterised by having coronate conidiogenous loci and conidial hila, i.e., with a convex central dome surrounded by a raised periclinal rim. Recognised species are treated and illustrated with line drawings and photomicrographs (light as well as scanning electron microscopy). Species known from culture are described in vivo as well as in vitro on standardised media and under controlled conditions. Details on host range/substrates and the geographic distribution are given based on published accounts, and a re-examination of numerous herbarium specimens. Various keys are provided to support the identification of Cladosporium species in vivo and in vitro. Morphological datasets are supplemented by DNA barcodes (nuclear ribosomal RNA gene operon, including the internal transcribed spacer regions ITS1 and ITS2, the 5.8S nrDNA, as well as partial actin and translation elongation factor 1-α gene sequences) diagnostic for individual species. In total 993 names assigned to Cladosporium s. lat., including Heterosporium (854 in Cladosporium and 139 in Heterosporium), are treated, of which 169 are recognized in Cladosporium s. str. The other taxa are doubtful, insufficiently known or have been excluded from Cladosporium in its current circumscription and re-allocated to other genera by the authors of this monograph or previous authors. Taxonomic novelties: Cladosporium allicinum (Fr.: Fr.) Bensch, U. Braun & Crous, comb. nov., C. astroideum var. catalinense U. Braun, var. nov., Fusicladium tectonicola (Yong H. He & Z.Y. Zhang) U. Braun & Bensch, comb. nov., Septoidium uleanum (Henn.) U. Braun, comb. nov., Zasmidium adeniae (Hansf.) U. Braun, comb. nov., Zasmidium

  4. Characterization and Phylogenetic Analysis of the Mitochondrial Genome of Shiraia bambusicola Reveals Special Features in the Order of Pleosporales

    PubMed Central

    Shen, Xiao-Ye; Li, Tong; Chen, Shuang; Fan, Li; Gao, Jian; Hou, Cheng-Lin

    2015-01-01

    Shiraia bambusicola P. Henn. is a pathogenic fungus of bamboo, and its fruiting bodies are regarded as folk medicine. We determined and analyzed its complete mitochondrial DNA sequence (circular DNA molecule of 39,030 bp, G + C content of 25.19%). It contains the typical genes encoding proteins involved in electron transport and coupled oxidative phosphorylation (nad1-6 and nad4L, cob and cox1-3), one ATP synthase subunit (atp6), 4 hypothetical proteins, and two genes for large and small rRNAs (rnl and rns). There is a set of 32 tRNA genes comprising all 20 amino acids, and these genes are evenly distributed on the two strands. Phylogenetic analyses based on concatenated mitochondrial proteins indicated that S. bambusicola clustered with members of the order Pleosporales, which is in agreement with previous results. The gene arrangements of Dothideomycetes species contained three regions of gene orders partitioned in their mitochondrial genomes, including block 1 (nad6-atp6), block 2 (nad1-cox3) and block 3 (genes around rns). S. bambusicola displayed unique special features that differed from the other Pleosporales species, especially in the coding regions around rns (trnR-trnY). Moreover, a comparison of gene orders in mitochondrial genomes from Pezizomycotina revealed that although all encoded regions are located on the same strand in most Pezizomycotina mtDNAs, genes from Dothideomycetes species had different orientations, as well as diverse positions and colocalization of genes (such as cox3, cox1-cox2 and nad2–nad3); these distinctions were regarded as class-specific features. Interestingly, two incomplete copies of the atp6 gene were found on different strands of the mitogenomic DNA, a finding that has not been observed in the other analyzed fungal species. In our study, mitochondrial genomes from Dothideomycetes species were comprehensively analyzed for the first time, including many species that have not appeared in previous reports. PMID:25790308

  5. Aerodynamic shape optimization using control theory

    NASA Technical Reports Server (NTRS)

    Reuther, James

    1996-01-01

    Aerodynamic shape design has long persisted as a difficult scientific challenge due its highly nonlinear flow physics and daunting geometric complexity. However, with the emergence of Computational Fluid Dynamics (CFD) it has become possible to make accurate predictions of flows which are not dominated by viscous effects. It is thus worthwhile to explore the extension of CFD methods for flow analysis to the treatment of aerodynamic shape design. Two new aerodynamic shape design methods are developed which combine existing CFD technology, optimal control theory, and numerical optimization techniques. Flow analysis methods for the potential flow equation and the Euler equations form the basis of the two respective design methods. In each case, optimal control theory is used to derive the adjoint differential equations, the solution of which provides the necessary gradient information to a numerical optimization method much more efficiently then by conventional finite differencing. Each technique uses a quasi-Newton numerical optimization algorithm to drive an aerodynamic objective function toward a minimum. An analytic grid perturbation method is developed to modify body fitted meshes to accommodate shape changes during the design process. Both Hicks-Henne perturbation functions and B-spline control points are explored as suitable design variables. The new methods prove to be computationally efficient and robust, and can be used for practical airfoil design including geometric and aerodynamic constraints. Objective functions are chosen to allow both inverse design to a target pressure distribution and wave drag minimization. Several design cases are presented for each method illustrating its practicality and efficiency. These include non-lifting and lifting airfoils operating at both subsonic and transonic conditions.

  6. Identification and validation of single nucleotide polymorphic markers linked to Ug99 stem rust resistance in spring wheat.

    PubMed

    Yu, Long-Xi; Chao, Shiaoman; Singh, Ravi P; Sorrells, Mark E

    2017-01-01

    Wheat stem rust (Puccinia graminis f. sp. tritici Eriks. and E. Henn.) is one of the most destructive diseases world-wide. Races belonging to Ug99 (or TTKSK) continue to cause crop losses in East Africa and threaten global wheat production. Developing and deploying wheat varieties with multiple race-specific genes or complex adult plant resistance is necessary to achieve durability. In the present study, we applied genome-wide association studies (GWAS) for identifying loci associated with the Ug99 stem rust resistance (SR) in a panel of wheat lines developed at the International Maize and Wheat Improvement Center (CIMMYT). Genotyping was carried out using the wheat 9K iSelect single nucleotide polymorphism (SNP) chip. Phenotyping was done in the field in Kenya by infection of Puccinia graminis f. sp. tritici race TTKST, the Sr24-virulent variant of Ug99. Marker-trait association identified 12 SNP markers significantly associated with resistance. Among them, 7 were mapped on five chromosomes. Markers located on chromosomes 4A and 4B overlapped with the location of the Ug99 resistance genes SrND643 and Sr37, respectively. Markers identified on 7DL were collocated with Sr25. Additional significant markers were located in the regions where no Sr gene has been reported. The chromosome location for five of the SNP markers was unknown. A BLASTN search of the NCBI database using the flanking sequences of the SNPs associated with Ug99 resistance revealed that several markers were linked to plant disease resistance analogues, while others were linked to regulatory factors or metabolic enzymes. A KASP (Kompetitive Allele Specific PCR) assay was used for validating six marker loci linked to genes with resistance to Ug99. Of those, four co-segregated with the Sr25-pathotypes while the rest identified unknown resistance genes. With further investigation, these markers can be used for marker-assisted selection in breeding for Ug99 stem rust resistance in wheat.

  7. Discovery of a Novel Stem Rust Resistance Allele in Durum Wheat That Exhibits Differential Reactions to Ug99 Isolates.

    PubMed

    Nirmala, Jayaveeramuthu; Saini, Jyoti; Newcomb, Maria; Olivera, Pablo; Gale, Sam; Klindworth, Daryl; Elias, Elias; Talbert, Luther; Chao, Shiaoman; Faris, Justin; Xu, Steven; Jin, Yue; Rouse, Matthew N

    2017-08-29

    Wheat stem rust, caused by Puccinia graminis f. sp. tritici Erikss. & E. Henn, can incur yield losses on susceptible cultivars of durum wheat, Triticum turgidum ssp. durum (Desf.) Husnot. Though several durum cultivars possess the stem rust resistance gene Sr13, additional genes in durum wheat effective against emerging virulent races have not been described. Durum line 8155-B1 confers resistance against the P. graminis f. sp. tritici race TTKST, the variant race of the Ug99 race group with additional virulence to wheat stem rust resistance gene Sr24 However, 8155-B1 does not confer resistance to the first-described race in the Ug99 race group: TTKSK. We mapped a single gene conferring resistance in 8155-B1 against race TTKST, Sr8155B1, to chromosome arm 6AS by utilizing Rusty/8155-B1 and Rusty*2/8155-B1 populations and the 90K Infinium iSelect Custom bead chip supplemented by KASP assays. One marker, KASP_6AS_IWB10558, cosegregated with Sr8155B1 in both populations and correctly predicted Sr8155B1 presence or absence in 11 durum cultivars tested. We confirmed the presence of Sr8155B1 in cultivar Mountrail by mapping in the population Choteau/Mountrail. The marker developed in this study could be used to predict the presence of resistance to race TTKST in uncharacterized durum breeding lines and also to combine Sr8155B1 with resistance genes effective to Ug99 such as Sr13 The map location of Sr8155B1 cannot rule out the possibility that this gene is an allele at the Sr8 locus. However, race specificity indicates that Sr8155B1 is different from the known alleles Sr8a and Sr8b. Copyright © 2017, G3: Genes, Genomes, Genetics.

  8. The genus Cladosporium.

    PubMed

    Bensch, K; Braun, U; Groenewald, J Z; Crous, P W

    2012-06-15

    A monographic revision of the hyphomycete genus Cladosporium s. lat. (Cladosporiaceae, Capnodiales) is presented. It includes a detailed historic overview of Cladosporium and allied genera, with notes on their phylogeny, systematics and ecology. True species of Cladosporium s. str. (anamorphs of Davidiella), are characterised by having coronate conidiogenous loci and conidial hila, i.e., with a convex central dome surrounded by a raised periclinal rim. Recognised species are treated and illustrated with line drawings and photomicrographs (light as well as scanning electron microscopy). Species known from culture are described in vivo as well as in vitro on standardised media and under controlled conditions. Details on host range/substrates and the geographic distribution are given based on published accounts, and a re-examination of numerous herbarium specimens. Various keys are provided to support the identification of Cladosporium species in vivo and in vitro. Morphological datasets are supplemented by DNA barcodes (nuclear ribosomal RNA gene operon, including the internal transcribed spacer regions ITS1 and ITS2, the 5.8S nrDNA, as well as partial actin and translation elongation factor 1-α gene sequences) diagnostic for individual species. In total 993 names assigned to Cladosporium s. lat., including Heterosporium (854 in Cladosporium and 139 in Heterosporium), are treated, of which 169 are recognized in Cladosporium s. str. The other taxa are doubtful, insufficiently known or have been excluded from Cladosporium in its current circumscription and re-allocated to other genera by the authors of this monograph or previous authors. Cladosporium allicinum (Fr.: Fr.) Bensch, U. Braun & Crous, comb. nov., C. astroideum var. catalinense U. Braun, var. nov., Fusicladium tectonicola (Yong H. He & Z.Y. Zhang) U. Braun & Bensch, comb. nov., Septoidium uleanum (Henn.) U. Braun, comb. nov., Zasmidium adeniae (Hansf.) U. Braun, comb. nov., Zasmidium dianellae (Sawada

  9. Molecular detection of Puccinia horiana in Chrysanthemum x morifolium through conventional and real-time PCR.

    PubMed

    Alaei, Hossein; Baeyen, Steve; Maes, Martine; Höfte, Monica; Heungens, Kurt

    2009-02-01

    Puccinia horiana Henn. is a quarantine organism and one of the most important fungal pathogens of Chrysanthemum x morifolium cultivars grown for cut flower or potted plant production (florist's chrysanthemum) in several regions of the world. Highly specific primer pairs were identified for conventional, nested, and real-time PCR detection of P. horiana based on the specific and sensitive PCR amplification of selected regions in the internal transcribed spacers (ITS1 and ITS2) of the nuclear ribosomal DNA (rDNA). Using these different PCR versions, 10 pg, 10 fg, and 5 fg genomic DNA could be detected, respectively. When using cloned target DNA as template, the detection limits were 5000, 50, and 5 target copies, respectively. These detection limits were not affected by a background of chrysanthemum plant DNA. The DNA extraction method was optimized to maximize the recoverability of the pathogen from infected plant tissue. A CTAB extraction protocol or a selection of commercial DNA extraction methods allowed the use of 10 ng total (plant+pathogen) DNA without interference of PCR inhibitors. Due to the specificity of the primers, SYBR Green I technology enabled reliable real time PCR signal detection. However, an efficient TaqMan probe is available. The lowest proportion of infected plant material that could still be detected when mixed with healthy plant material was 0.001%. The real-time PCR assay could detect as few as eight pure P. horiana basidiospores, demonstrating the potential of the technique for aerial detection of the pathogen. The amount of P. horiana DNA in plant tissue was determined at various time points after basidiospore inoculation. Using the real-time PCR protocol, it was possible to detect the pathogen immediately after the inoculation period, even though the accumulation of pathogen DNA was most pronounced near the end of the latent period. The detection system proved to be accurate and sensitive and could help not only in pathogen diagnosis but

  10. High-affinity AKAP7δ–protein kinase A interaction yields novel protein kinase A-anchoring disruptor peptides

    PubMed Central

    Hundsrucker, Christian; Krause, Gerd; Beyermann, Michael; Prinz, Anke; Zimmermann, Bastian; Diekmann, Oliver; Lorenz, Dorothea; Stefan, Eduard; Nedvetsky, Pavel; Dathe, Margitta; Christian, Frank; Mcsorley, Theresa; Krause, Eberhard; Mcconnachie, George; Herberg, Friedrich W.; Scott, John D.; Rosenthal, Walter; Klussmann, Enno

    2006-01-01

    PKA (protein kinase A) is tethered to subcellular compartments by direct interaction of its regulatory subunits (RI or RII) with AKAPs (A kinase-anchoring proteins). AKAPs preferentially bind RII subunits via their RII-binding domains. RII-binding domains form structurally conserved amphipathic helices with unrelated sequences. Their binding affinities for RII subunits differ greatly within the AKAP family. Amongst the AKAPs that bind RIIα subunits with high affinity is AKAP7δ [AKAP18δ; Kd (equilibrium dissociation constant) value of 31 nM]. An N-terminally truncated AKAP7δ mutant binds RIIα subunits with higher affinity than the full-length protein presumably due to loss of an inhibitory region [Henn, Edemir, Stefan, Wiesner, Lorenz, Theilig, Schmidtt, Vossebein, Tamma, Beyermann et al. (2004) J. Biol. Chem. 279, 26654–26665]. In the present study, we demonstrate that peptides (25 amino acid residues) derived from the RII-binding domain of AKAP7δ bind RIIα subunits with higher affinity (Kd=0.4±0.3 nM) than either full-length or N-terminally truncated AKAP7δ, or peptides derived from other RII binding domains. The AKAP7δ-derived peptides and stearate-coupled membrane-permeable mutants effectively disrupt AKAP–RII subunit interactions in vitro and in cell-based assays. Thus they are valuable novel tools for studying anchored PKA signalling. Molecular modelling indicated that the high affinity binding of the amphipathic helix, which forms the RII-binding domain of AKAP7δ, with RII subunits involves both the hydrophobic and the hydrophilic faces of the helix. Alanine scanning (25 amino acid peptides, SPOT technology, combined with RII overlay assays) of the RII binding domain revealed that hydrophobic amino acid residues form the backbone of the interaction and that hydrogen bond- and salt-bridge-forming amino acid residues increase the affinity of the interaction. PMID:16483255

  11. Development of COS-SNP and HRM markers for high-throughput and reliable haplotype-based detection of Lr14a in durum wheat (Triticum durum Desf.).

    PubMed

    Terracciano, Irma; Maccaferri, Marco; Bassi, Filippo; Mantovani, Paola; Sanguineti, Maria C; Salvi, Silvio; Simková, Hana; Doležel, Jaroslav; Massi, Andrea; Ammar, Karim; Kolmer, James; Tuberosa, Roberto

    2013-04-01

    Leaf rust (Puccinia triticina Eriks. & Henn.) is a major disease affecting durum wheat production. The Lr14a-resistant gene present in the durum wheat cv. Creso and its derivative cv. Colosseo is one of the best characterized leaf-rust resistance sources deployed in durum wheat breeding. Lr14a has been mapped close to the simple sequence repeat markers gwm146, gwm344 and wmc10 in the distal portion of the chromosome arm 7BL, a gene-dense region. The objectives of this study were: (1) to enrich the Lr14a region with single nucleotide polymorphisms (SNPs) and high-resolution melting (HRM)-based markers developed from conserved ortholog set (COS) genes and from sequenced Diversity Array Technology (DArT(®)) markers; (2) to further investigate the gene content and colinearity of this region with the Brachypodium and rice genomes. Ten new COS-SNP and five HRM markers were mapped within an 8.0 cM interval spanning Lr14a. Two HRM markers pinpointed the locus in an interval of <1.0 cM and eight COS-SNPs were mapped 2.1-4.1 cM distal to Lr14a. Each marker was tested for its capacity to predict the state of Lr14a alleles (in particular, Lr14-Creso associated to resistance) in a panel of durum wheat elite germplasm including 164 accessions. Two of the most informative markers were converted into KASPar(®) markers. Single assay markers ubw14 and wPt-4038-HRM designed for agarose gel electrophoresis/KASPar(®) assays and high-resolution melting analysis, respectively, as well as the double-marker combinations ubw14/ubw18, ubw14/ubw35 and wPt-4038-HRM-ubw35 will be useful for germplasm haplotyping and for molecular-assisted breeding.

  12. Resistance to recombinant stem rust race TPPKC in hard red spring wheat.

    PubMed

    Klindworth, D L; Miller, J D; Williams, N D; Xu, S S

    2011-08-01

    The wheat (Triticum aestivum L.) stem rust (Puccinia graminis Pers.:Pers. f.sp. tritici Eriks. and Henn.) resistance gene SrWld1 conditions resistance to all North American stem rust races and is an important gene in hard red spring (HRS) wheat cultivars. A sexually recombined race having virulence to SrWld1 was isolated in the 1980s. Our objective was to determine the genetics of resistance to the race. The recombinant race was tested with the set of stem rust differentials and with a set of 36 HRS and 6 durum cultivars. Chromosomal location studies in cultivars Len, Coteau, and Stoa were completed using aneuploid analysis, molecular markers, and allelism tests. Stem rust differential tests coded the race as TPPKC, indicating it differed from TPMKC by having added virulence on Sr30 as well as SrWld1. Genes effective against TPPKC were Sr6, Sr9a, Sr9b, Sr13, Sr24, Sr31, and Sr38. Genetic studies of resistance to TPPKC indicated that Len, Coteau, and Stoa likely carried Sr9b, that Coteau and Stoa carried Sr6, and Stoa carried Sr24. Tests of HRS and durum cultivars indicated that five HRS and one durum cultivar were susceptible to TPPKC. Susceptible HRS cultivars were postulated to have SrWld1 as their major stem rust resistance gene. Divide, the susceptible durum cultivar, was postulated to lack Sr13. We concluded that although TPPKC does not constitute a threat similar to TTKSK and its variants, some cultivars would be lost from production if TPPKC became established in the field.

  13. Complete Monte Carlo Simulation of Neutron Scattering Experiments

    NASA Astrophysics Data System (ADS)

    Drosg, M.

    2011-12-01

    In the far past, it was not possible to accurately correct for the finite geometry and the finite sample size of a neutron scattering set-up. The limited calculation power of the ancient computers as well as the lack of powerful Monte Carlo codes and the limitation in the data base available then prevented a complete simulation of the actual experiment. Using e.g. the Monte Carlo neutron transport code MCNPX [1], neutron scattering experiments can be simulated almost completely with a high degree of precision using a modern PC, which has a computing power that is ten thousand times that of a super computer of the early 1970s. Thus, (better) corrections can also be obtained easily for previous published data provided that these experiments are sufficiently well documented. Better knowledge of reference data (e.g. atomic mass, relativistic correction, and monitor cross sections) further contributes to data improvement. Elastic neutron scattering experiments from liquid samples of the helium isotopes performed around 1970 at LANL happen to be very well documented. Considering that the cryogenic targets are expensive and complicated, it is certainly worthwhile to improve these data by correcting them using this comparatively straightforward method. As two thirds of all differential scattering cross section data of 3He(n,n)3He are connected to the LANL data, it became necessary to correct the dependent data measured in Karlsruhe, Germany, as well. A thorough simulation of both the LANL experiments and the Karlsruhe experiment is presented, starting from the neutron production, followed by the interaction in the air, the interaction with the cryostat structure, and finally the scattering medium itself. In addition, scattering from the hydrogen reference sample was simulated. For the LANL data, the multiple scattering corrections are smaller by a factor of five at least, making this work relevant. Even more important are the corrections to the Karlsruhe data due to the

  14. The Botryosphaeriaceae: genera and species known from culture

    PubMed Central

    Phillips, A.J.L.; Alves, A.; Abdollahzadeh, J.; Slippers, B.; Wingfield, M.J.; Groenewald, J.Z.; Crous, P.W.

    2013-01-01

    . & A.J.L. Phillips, Lasiodiplodia lignicola (Ariyawansa, J.K. Liu & K.D. Hyde) A.J.L. Phillips, A. Alves & Abdollahz., Neoscytalidium hyalinum (C.K. Campb. & J.L. Mulder) A.J.L. Phillips, Groenewald & Crous, Sphaeropsis citrigena (A.J.L. Phillips, P.R. Johnst. & Pennycook) A.J.L. Phillips & A. Alves, Sphaeropsis eucalypticola (Doilom, J.K. Liu, & K.D. Hyde) A.J.L. Phillips, Sphaeropsis porosa (Van Niekerk & Crous) A.J.L. Phillips & A. Alves. Epitypification (basionym) - Sphaeria sapinea Fries. Neotypifications (basionyms) - Botryodiplodia theobromae Pat., Physalospora agaves Henn, Sphaeria atrovirens var. visci Alb. & Schwein. PMID:24302790

  15. Identification of New Resistance Loci to African Stem Rust Race TTKSK in Tetraploid Wheats Based on Linkage and Genome-Wide Association Mapping

    PubMed Central

    Laidò, Giovanni; Panio, Giosuè; Marone, Daniela; Russo, Maria A.; Ficco, Donatella B. M.; Giovanniello, Valentina; Cattivelli, Luigi; Steffenson, Brian; de Vita, Pasquale; Mastrangelo, Anna M.

    2015-01-01

    Stem rust, caused by Puccinia graminis Pers. f. sp. tritici Eriks. and E. Henn. (Pgt), is one of the most destructive diseases of wheat. Races of the pathogen in the “Ug99 lineage” are of international concern due to their virulence for widely used stem rust resistance genes and their spread throughout Africa. Disease resistant cultivars provide one of the best means for controlling stem rust. To identify quantitative trait loci (QTL) conferring resistance to African stem rust race TTKSK at the seedling stage, we evaluated an association mapping (AM) panel consisting of 230 tetraploid wheat accessions under greenhouse conditions. A high level of phenotypic variation was observed in response to race TTKSK in the AM panel, allowing for genome-wide association mapping of resistance QTL in wild, landrace, and cultivated tetraploid wheats. Thirty-five resistance QTL were identified on all chromosomes, and seventeen are of particular interest as identified by multiple associations. Many of the identified resistance loci were coincident with previously identified rust resistance genes; however, nine on chromosomes 1AL, 2AL, 4AL, 5BL, and 7BS may be novel. To validate AM results, a biparental population of 146 recombinant inbred lines was also considered, which derived from a cross between the resistant cultivar “Cirillo” and susceptible “Neodur.” The stem rust resistance of Cirillo was conferred by a single gene on the distal region of chromosome arm 6AL in an interval map coincident with the resistance gene Sr13, and confirmed one of the resistance loci identified by AM. A search for candidate resistance genes was carried out in the regions where QTL were identified, and many of them corresponded to NBS-LRR genes and protein kinases with LRR domains. The results obtained in the present study are of great interest as a high level of genetic variability for resistance to race TTKSK was described in a germplasm panel comprising most of the tetraploid wheat sub

  16. A novel Robertsonian translocation event leads to transfer of a stem rust resistance gene (Sr52) effective against race Ug99 from Dasypyrum villosum into bread wheat.

    PubMed

    Qi, L L; Pumphrey, M O; Friebe, Bernd; Zhang, P; Qian, C; Bowden, R L; Rouse, M N; Jin, Y; Gill, B S

    2011-06-01

    Stem rust (Puccinia graminis f. sp. tritici Eriks. & E. Henn.) (the causal agent of wheat stem rust) race Ug99 (also designated TTKSK) and its derivatives have defeated several important stem rust resistance genes widely used in wheat (Triticum aestivum L.) production, rendering much of the worldwide wheat acreage susceptible. In order to identify new resistance sources, a large collection of wheat relatives and genetic stocks maintained at the Wheat Genetic and Genomic Resources Center was screened. The results revealed that most accessions of the diploid relative Dasypyrum villosum (L.) Candargy were highly resistant. The screening of a set of wheat-D. villosum chromosome addition lines revealed that the wheat-D. villosum disomic addition line DA6V#3 was moderately resistant to race Ug99. The objective of the present study was to produce and characterize compensating wheat-D. villosum whole arm Robertsonian translocations (RobTs) involving chromosomes 6D of wheat and 6V#3 of D. villosum through the mechanism of centric breakage-fusion. Seven 6V#3-specific EST-STS markers were developed for screening F(2) progeny derived from plants double-monosomic for chromosomes 6D and 6V#3. Surprisingly, although 6D was the target chromosome, all recovered RobTs involved chromosome 6A implying a novel mechanism for the origin of RobTs. Homozygous translocations (T6AS·6V#3L and T6AL·6V#3S) with good plant vigor and full fertility were selected from F(3) families. A stem rust resistance gene was mapped to the long arm 6V#3L in T6AS·6V#3L and was designated as Sr52. Sr52 is temperature-sensitive and is most effective at 16°C, partially effective at 24°C, and ineffective at 28°C. The T6AS·6V#3L stock is a new source of resistance to Ug99, is cytogenetically stable, and may be useful in wheat improvement.

  17. The Colletotrichum acutatum species complex

    PubMed Central

    Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Crous, P.W.

    2012-01-01

    . orchidophilum Damm, P.F. Cannon & Crous, C. paxtonii Damm, P.F. Cannon & Crous, C. pseudoacutatum Damm, P.F. Cannon & Crous C. pyricola Damm, P.F. Cannon & Crous, C. rhombiforme Damm, P.F. Cannon & Crous, C. scovillei Damm, P.F. Cannon & Crous, C. sloanei Damm, P.F. Cannon & Crous, C. tamarilloi Damm, P.F. Cannon & Crous, C. walleri Damm, P.F. Cannon & Crous. Typifications: Epitypifications - C. acutatum J.H. Simmonds, C. limetticola (R.E. Clausen) Damm, P.F. Cannon & Crous, C. nymphaeae (Pass.) Aa, C. phormii (Henn.) D.F. Farr & Rossman, C. salicis (Fuckel) Damm, P.F. Cannon & Crous. Lectotypifications - C. nymphaeae (Pass.) Aa, C. orchidearum Allesch. PMID:23136458

  18. Prenatal Arsenic Exposure and Birth Outcomes among a Population Residing near a Mining-Related Superfund Site

    PubMed Central

    Henn, Birgit Claus; Ettinger, Adrienne S.; Hopkins, Marianne R.; Jim, Rebecca; Amarasiriwardena, Chitra; Christiani, David C.; Coull, Brent A.; Bellinger, David C.; Wright, Robert O.

    2016-01-01

    importance. Citation: Claus Henn B, Ettinger AS, Hopkins MR, Jim R, Amarasiriwardena C, Christiani DC, Coull BA, Bellinger DC, Wright RO. 2016. Prenatal arsenic exposure and birth outcomes among a population residing near a mining-related Superfund site. Environ Health Perspect 124:1308–1315; http://dx.doi.org/10.1289/ehp.1510070 PMID:26859631

  19. Using semi-continuous, in-situ measurements of nitrous oxide isotopic composition at a suburban site to track emission processes

    NASA Astrophysics Data System (ADS)

    Harris, Eliza; Henne, Stephan; Christoph, Hüglin; Christoph, Zellweger; Béla, Tuzson; Erkan, Ibraim; Lukas, Emmenegger; Joachim, Mohn

    2017-04-01

    , δ15Nbulk and particularly SP appear to vary too strongly in response to other factors affecting emission processes to provide a useful distinction between source categories on a regional scale - these isotopocules may however be useful to distinguish emission pathways on a local scale. For comparison, FLEXPART-COSMO transport simulations [4] were combined with emissions from the EDGAR inventory and estimates of source isotopic composition from literature, to simulate N2O isotopic composition at the sampling site. The model was able to capture variability in N2O mole fraction adequately (R2 = 0.34; p <<0.01). However, the measured variability in source isotopic composition was 1-2 orders of magnitude larger than simulated, illustrating that our knowledge of isotopic source signatures - in particular technical N2O sources - is still too limited to successfully model variations in ambient N2O isotopic composition. [1] Mohn et al. (2012) Atmospheric Measurement Techniques, doi:10.5194/amt-5-1601-2012 [2] Harris et al. (2014) Analytical Chemistry, doi: 10.1021/ac403606u. [3] Röckmann et al. (2016) Atmospheric Chemistry and Physics, doi:10.5194/acp-16-10469-2016. [4] Henne et al. (2016) Atmospheric Chemistry and Physics, doi:10.5194/acp-16-3683-2016.

  20. Ames Optimized TCA Configuration

    NASA Technical Reports Server (NTRS)

    Cliff, Susan E.; Reuther, James J.; Hicks, Raymond M.

    1999-01-01

    CPU time limit available on the Cray machines. A typical optimization run using finite difference gradients can use only 30 to 40 design variables and one optimization iteration within the 8 hour queue limit for the chosen grid size and convergence level. The efficiency afforded by the adjoint method allowed for 50-120 design variables and 5-10 optimization iterations in the 8 hour queue. Geometric perturbations to the wing and fuselage were made using the Hicks/Henne (HH) shape functions. The HH functions were distributed uniformly along the chords of the wing defining sections and lofted linearly. During single-surface design, constraints on thickness and volume at selected wing stations were imposed. Both fuselage camber and cross-sectional area distributions were permitted to change during design. The major disadvantage to the use of these functions is the inherent surface waviness produced by repeated use of such functions. Many smoothing operations were required following optimization runs to produce a configuration with reasonable smoothness. Wagner functions were also used on the wing sections but were never used on the fuselage. The Wagner functions are a family of increasingly oscillatory functions that have also been used extensively in airfoil design. The leading and trailing edge regions of the wing were designed by use of polynomial and monomial functions respectively. Twist was attempted but was abandoned because of little performance improvement available from changing the baseline twist.

  1. Numerical simulations and theoretical analysis of High Energy Density experiments at the next generation of ion beam facilities at Darmstadt: The HEDgeHOB collaboration

    NASA Astrophysics Data System (ADS)

    Tahir, N. A.; Shutov, A.; Lomonosov, I. V.; Piriz, A. R.; Wouchuk, G.; Deutsch, C.; Hoffmann, D. H. H.; Fortov, V. E.

    2006-06-01

    This paper presents detailed numerical simulations and theoretical analysis of different possible experimental schemes to study the thermophysical and transport properties of High Energy Density ( HED) matter generated by the interaction of intense heavy ion beams. The considered beam parameters are those which will be available at the future Facility for Antiprotons and Ion Research ( FAIR) at Darmstadt [W.F. Henneing, Nucl. Instrum. Methods, B214, (2004) 211]. This work has shown that an intense heavy ion beam can be used employing two very different configurations to study HED states in matter. In the first scheme, a sample material is uniformly and isochorically heated by the beam and the heated material is subsequently allowed to expand isentropically. Depending on the specific energy deposited in the material, one may access all the interesting physical states, including that of an expanded hot liquid ( EHL), two-phase liquid-gas ( 2PLG) region, critical point ( CP) parameters as well as strongly coupled plasma ( SCP) states during the expansion. This scheme is named HIHEX ( Heavy Ion Heating and EXpansion). We have considered a 1 GeV/u uranium beam with an intensity, N = 10 10-10 12 ions that are delivered in a single bunch, 50 ns long. The particle intensity distribution in the transverse direction is assumed to be Gaussian with a full width at half maximum (FWHM) in the range of 1-4 mm. We note that the estimated critical temperatures for many metals are very high which are very difficult to access using traditional techniques of shock compression of matter. Employing the proposed HIHEX scheme, one can easily achieve the required temperature by depositing corresponding specific energy in the sample. Solid as well as porous targets have been used in our study. In the second scheme, a sample material like frozen hydrogen that is enclosed in a cylindrical shell of a high- Z material like gold or lead, is imploded by the ion beam. This scheme is specially

  2. Frontiers of QC Laser spectroscopy for high precision isotope ratio analysis of greenhouse gases

    NASA Astrophysics Data System (ADS)

    Emmenegger, Lukas; Mohn, Joachim; Harris, Eliza; Eyer, Simon; Ibraim, Erkan; Tuzson, Béla

    2016-04-01

    ., Henne, S. & Emmenegger, L. Tracking isotopic signatures of CO2 at the high altitude site Jungfraujoch with laser spectroscopy: Analytical improvements and representative re-sults. Atmospheric Measurement Techniques 6, 1659-1671 (2013). 2 Tuzson, B. et al. Continuous isotopic composition measurements of tropospheric CO2 at Jungfraujoch (3580 m a.s.l.), Switzerland: real-time observation of regional pollution events. Atmospheric Chemistry and Physics 11, 1685-1696 (2011). 3 Mohn, J. et al. A liquid nitrogen-free preconcentration unit for measurements of ambient N2O isotopomers by QCLAS. Atmospheric Measurement Techniques 3, 609-618 (2010). 4 Wolf, B. et al. First on-line isotopic characterization of N2O above intensively managed grassland. Biogeosciences 12, 2517-1960 (2015). 5 Harris, E. et al. Nitrous oxide and methane emissions and nitrous oxide isotopic composition from waste incineration in Switzerland. Waste Management 35, 135-140 (2015). 6 Harris, E. et al. Isotopic evidence for nitrous oxide production pathways in a partial nitritation-anammox reactor. Water Research 83, 258-270 (2015). 7 Eyer, S. et al. Real-time analysis of δ13C- and δ D-CH4 in ambient air with laser spectroscopy: method development and first intercomparison results. Atmos. Meas. Tech. Discuss. 8, 8925-8970 (2015).

  3. Ames Optimized TCA Configuration

    NASA Technical Reports Server (NTRS)

    Cliff, Susan E.; Reuther, James J.; Hicks, Raymond M.

    1999-01-01

    CPU time limit available on the Cray machines. A typical optimization run using finite difference gradients can use only 30 to 40 design variables and one optimization iteration within the 8 hour queue limit for the chosen grid size and convergence level. The efficiency afforded by the adjoint method allowed for 50-120 design variables and 5-10 optimization iterations in the 8 hour queue. Geometric perturbations to the wing and fuselage were made using the Hicks/Henne (HH) shape functions. The HH functions were distributed uniformly along the chords of the wing defining sections and lofted linearly. During single-surface design, constraints on thickness and volume at selected wing stations were imposed. Both fuselage camber and cross-sectional area distributions were permitted to change during design. The major disadvantage to the use of these functions is the inherent surface waviness produced by repeated use of such functions. Many smoothing operations were required following optimization runs to produce a configuration with reasonable smoothness. Wagner functions were also used on the wing sections but were never used on the fuselage. The Wagner functions are a family of increasingly oscillatory functions that have also been used extensively in airfoil design. The leading and trailing edge regions of the wing were designed by use of polynomial and monomial functions respectively. Twist was attempted but was abandoned because of little performance improvement available from changing the baseline twist.

  4. Phylogenetic lineages in Pseudocercospora

    PubMed Central

    Crous, P.W.; Braun, U.; Hunter, G.C.; Wingfield, M.J.; Verkley, G.J.M.; Shin, H.-D.; Nakashima, C.; Groenewald, J.Z.

    2013-01-01

    .S. Salmon & Wormald) Crous, H.D. Shin & U. Braun, Pseudocercospora hakeae (U. Braun & Crous) U. Braun & Crous, Pseudocercospora leucadendri (Cooke) U. Braun & Crous, Pseudocercospora snelliana (Reichert) U. Braun, H.D. Shin, C. Nakash. & Crous, Pseudocercosporella chaenomelis (Y. Suto) C. Nakash., Crous, U. Braun & H.D. Shin; Typifications: Epitypifications - Pseudocercospora angolensis (T. Carvalho & O. Mendes) Crous & U. Braun, Pseudocercospora araliae (Henn.) Deighton, Pseudocercospora cercidis-chinensis H.D. Shin & U. Braun, Pseudocercospora corylopsidis (Togashi & Katsuki) C. Nakash. & Tak. Kobay., Pseudocercospora dovyalidis (Chupp & Doidge) Deighton, Pseudocercospora fukuokaensis (Chupp) X.J. Liu & Y.L. Guo, Pseudocercospora humuli (Hori) Y.L. Guo & X.J. Liu, Pseudocercospora kiggelariae (Syd.) Crous & U. Braun, Pseudocercospora lyoniae (Katsuki & Tak. Kobay.) Deighton, Pseudocercospora lythri H.D. Shin & U. Braun, Pseudocercospora sambucigena U. Braun, Crous & K. Schub., Pseudocercospora stephanandrae (Tak. Kobay. & H. Horie) C. Nakash. & Tak. Kobay., Pseudocercospora viburnigena U. Braun & Crous, Pseudocercosporella chaenomelis (Y. Suto) C. Nakash., Crous, U. Braun & H.D. Shin, Xenostigmina zilleri (A. Funk) Crous; Lectotypification - Pseudocercospora ocimicola (Petr. & Cif.) Deighton; Neotypifications - Pseudocercospora kiggelariae (Syd.) Crous & U. Braun, Pseudocercospora lonicericola (W. Yamam.) Deighton, Pseudocercospora zelkovae (Hori) X.J. Liu & Y.L. Guo. PMID:24014898

  5. Redisposition of phoma-like anamorphs in Pleosporales

    PubMed Central

    de Gruyter, J.; Woudenberg, J.H.C.; Aveskamp, M.M.; Verkley, G.J.M.; Groenewald, J.Z.; Crous, P.W.

    2013-01-01

    & Verkley, Plen. collinsoniae (Dearn. & House) Gruyter, Aveskamp & Verkley, Plen. confertus (Niessl ex Sacc.) Gruyter, Aveskamp & Verkley, Plen. congestus (M.T. Lucas) Gruyter, Aveskamp & Verkley, Plen. enteroleucus (Sacc.) Gruyter, Aveskamp & Verkley, Plen. fallaciosus (Berl.) Gruyter, Aveskamp & Verkley, Plen. hendersoniae (Fuckel) Gruyter, Aveskamp & Verkley, Plen. influorescens (Boerema & Loer.) Gruyter, Aveskamp & Verkley, Plen. libanotidis (Fuckel) Gruyter, Aveskamp & Verkley, Plen. lindquistii (Frezzi) Gruyter, Aveskamp & Verkley, Plen. lupini (Ellis & Everh.) Gruyter, Aveskamp & Verkley, Plen. pimpinellae (Lowen & Sivan.) Gruyter, Aveskamp & Verkley, Plen. tracheiphilus (Petri) Gruyter, Aveskamp & Verkley, Plen. visci (Moesz) Gruyter, Aveskamp & Verkley, Pleospora fallens (Sacc.) Gruyter & Verkley, Pleo. flavigena (Constantinou & Aa) Gruyter & Verkley, Pleo. incompta (Sacc. & Martelli) Gruyter & Verkley, Pyrenochaetopsis pratorum (P.R. Johnst. & Boerema) Gruyter, Aveskamp & Verkley, Subplenodomus apiicola (Kleb.) Gruyter, Aveskamp & Verkley, Subplen. drobnjacensis (Bubák) Gruyter, Aveskamp & Verkley, Subplen. valerianae (Henn.) Gruyter, Aveskamp & Verkley, Subplen. violicola (P. Syd.) Gruyter, Aveskamp & Verkley, Westerdykella capitulum (V.H. Pawar, P.N. Mathur & Thirum.) de Gruyter, Aveskamp & Verkley, W. minutispora (P.N. Mathur ex Gruyter & Noordel.) Gruyter, Aveskamp & Verkley. New names: Pleospora angustis Gruyter & Verkley, Pleospora halimiones Gruyter & Verkley. PMID:24014897

  6. A 400 year reconstruction of July relative air humidity for the region Vienna (eastern Austria) based on carbon and oxygen stable isotope ratios in tree-ring latewood cellulose of oaks

    NASA Astrophysics Data System (ADS)

    Haupt, M.; Boettger, T.; Weigl, M.; Grabner, M.

    2009-04-01

    , Guillemin MT, Gutierrez E, Haupt M, Helle G, Hilasvuori E, Jungner H, Kalela-Brundin M, Krapiec M, Leuenberger M, Loader NJ, Masson-Delmotte V, Pazdur A, Pawelczyk S, Pierre M, Planells O, Pukiene R, Reynolds-Henne CE, Rinne KT, Saracino A, Saurer M, Sonninen E, Stievenard M, Switsur VR, Szczepanek M, Szychowska-Krapiec E, Todaro L, Waterhouse JS, Weigl M, Schleser GH (2007) Signal strength and climate calibration of a European tree ring isotope network. Geophys Res Lett 34: L24302. van der Schrier G, Efthymiadis D, Briffa KR, Jones PD (2007) European Alpine moisture variability for 1900-2003. Int J Climatol 27: 415-427.

  7. Is global dimming and brightening limited to urban areas?

    NASA Astrophysics Data System (ADS)

    Tanaka, Katsumasa; Imamovic, Adel; Folini, Doris; Ohmura, Atsumu; Wild, Martin

    2013-04-01

    as zenith transmittance and maximum transmittance (A. Ohmura, personal communication, 26 February 2012) separately for the pristine (i.e. least influenced by urbanization) and polluted stations. 2) We deal with several hundreds of stations in Europe, Japan, and China compiled by the GEBA project and look into the SSR data since 1960. To infer the temporal development of the urbanization level at each measurement site, we use the following two datasets: i) the high resolution gridded emission data (0.5 degree) provided by the Emissions Database for Global Atmospheric Research (EDGAR) (Source: European Commission, Joint Research Centre / Netherlands Environmental Assessment Agency), and ii) the population data (0.08 degree) obtained from the History Database of the Global Environment (HYDE) (Klein Goldewijk et al. 2010). To these data, we apply a selection of distance weighting functions to account for the spatial extent of urbanization surrounding each site (Folini et al. 2009). Our preliminary results obtained from these two approaches do not support the claim that the global dimming and brightening is limited to urban areas. References Alpert P, Kishcha P, Kaufman YJ, Schwarzbard R (2005) Global dimming or local dimming?: Effect of urbanization on sunlight availability. Geophysical Research Letters, 32, L17802. Dwyer JG, Norris JR, Ruckstuhl C (2010) Do climate models reproduce observed solar dimming and brightening over China and Japan? Journal of Geophysical Research: Atmospheres, 115, D00K08. Folini D, Kaufmann P, Ubl S, Henne S (2009) Region of influence of 13 remote European measurement sites based on modeled carbon monoxide mixing ratios. Journal of Geophysical Research: Atmospheres, 114, D08307. Klein Goldewijk K, Beusen A, Janssen P (2010) Long-term dynamic modeling of global population and built-up area in a spatially explicit way: HYDE 3.1. The Holocene, 20, 565-573. Kvalevåg MM, Myhre G (2007) Human Impact on Direct and Diffuse Solar Radiation during the

  8. List of Participants

    NASA Astrophysics Data System (ADS)

    2008-11-01

    MoralIstituto Nazionale di Fisica Nucleare, Università di Torino Valentina Giangreco Marotta PulettiUppsala University Valeria L GiliQueen Mary, University of London Luciano GirardelloUniversità di Milano-Bicocca Gian GiudiceCERN, Geneva Kevin Goldstein Institute for Theoretical Physics, Utrecht University Joaquim Gomis Universitat de Barcelona Pietro Antonio GrassiUniversità del Piemonte Orientale, Alessandria Viviane GraßLudwig-Maximilians-Universität, München Gianluca Grignani Università di Perugia Luca Griguolo Università di Parma Johannes GrosseJagiellonian University, Krakow Umut Gursoy École Polytechnique, Palaiseau Norberto Gutierrez RodriguezUniversity of Oviedo Babak HaghighatPhysikalisches Institut, Universität Bonn Troels Harmark Niels Bohr Institute, København Robert HaslhoferEidgenössische Technische Hochschule (ETH), Zürich Tae-Won HaPhysikalisches Institut, Universität Bonn Alexander HauptImperial College London and Max-Planck-Institut für Gravitationsphysik (AEI), Potsdam Marc HenneauxUniversité Libre de Bruxelles Johannes HennLAPTH, Annecy-le-Vieux Shinji HiranoNiels Bohr Institute, København Stefan HoheneggerEidgenössische Technische Hochschule (ETH), Zürich Jan HomannLudwig-Maximilians-Universität, München Gabriele Honecker CERN, Geneva Joost HoogeveenInstituut voor Theoretische Fysica, Universiteit van Amsterdam Mechthild HuebscherUniversidad Autónoma de Madrid Chris HullImperial College London Carmen-Liliana IonescuUniversity of Craiova Ella JasminUniversité Libre de Bruxelles Konstantin KanishchevInstitute of Theoretical Physics, University of Warsaw Stefanos Katmadas Utrecht University Alexandros KehagiasNational Technical University of Athens Christoph Keller Eidgenössische Technische Hochschule (ETH), Zürich Patrick Kerner Max-Planck-Institut für Physik, München Rebiai KhaledLaboratoire de Physique Mathématique et Physique Subatomique, Université Mentouri, Constantine Elias Kiritsis Centre de Physique Théorique,