The Combined Effects of Moss-Dominated Biocrusts and Vegetation on Erosion and Soil Moisture and Implications for Disturbance on the Loess Plateau, China

PubMed Central

Bu, Chongfeng; Wu, Shufang; Han, Fengpeng; Yang, Yongsheng; Meng, Jie

2015-01-01

Biological soil crusts (BSCs, or biocrusts) have important positive ecological functions such as erosion control and soil fertility improvement, and they may also have negative effects on soil moisture in some cases. Simultaneous discussions of the two-sided impacts of BSCs are key to the rational use of this resource. This study focused on the contribution of BSCs while combining with specific types of vegetation to erosion reduction and their effects on soil moisture, and it addressed the feasibility of removal or raking disturbance. Twelve plots measuring 4 m × 2 m and six treatments (two plots for each) were established on a 15° slope in a small watershed in the Loess Plateau using BSCs, bare land (as a control, BL), Stipa bungeana Trin. (STBU), Caragana korshinskii Kom. (CAKO), STBU planted with BSCs (STBU+BSCs) and CAKO planted with BSCs (CAKO+BSCs). The runoff, soil loss and soil moisture to a depth of 3 m were measured throughout the rainy season (from June to September) of 2010. The results showed that BSCs significantly reduced runoff by 37.3% and soil loss by 81.0% and increased infiltration by 12.4% in comparison with BL. However, when combined with STBU or CAKO, BSCs only made negligible contributions to erosion control (a runoff reduction of 7.4% and 5.7% and a soil loss reduction of 0.7% and 0.3%). Generally, the soil moisture of the vegetation plots was lower in the upper layer than that of the BL plots, although when accompanied with a higher amount of infiltration, this soil moisture consumption phenomenon was much clearer when combining vegetation with BSCs. Because of the trivial contributions from BSCs to erosion control and the remaining exacerbated consumption of soil water, moderate disturbance by BSCs should be considered in plots with adequate vegetation cover to improve soil moisture levels without a significant erosion increase, which was implied to be necessary and feasible. PMID:25993431

The combined effects of moss-dominated biocrusts and vegetation on erosion and soil moisture and implications for disturbance on the Loess Plateau, China.

PubMed

Bu, Chongfeng; Wu, Shufang; Han, Fengpeng; Yang, Yongsheng; Meng, Jie

2015-01-01

Biological soil crusts (BSCs, or biocrusts) have important positive ecological functions such as erosion control and soil fertility improvement, and they may also have negative effects on soil moisture in some cases. Simultaneous discussions of the two-sided impacts of BSCs are key to the rational use of this resource. This study focused on the contribution of BSCs while combining with specific types of vegetation to erosion reduction and their effects on soil moisture, and it addressed the feasibility of removal or raking disturbance. Twelve plots measuring 4 m × 2 m and six treatments (two plots for each) were established on a 15° slope in a small watershed in the Loess Plateau using BSCs, bare land (as a control, BL), Stipa bungeana Trin. (STBU), Caragana korshinskii Kom. (CAKO), STBU planted with BSCs (STBU+BSCs) and CAKO planted with BSCs (CAKO+BSCs). The runoff, soil loss and soil moisture to a depth of 3 m were measured throughout the rainy season (from June to September) of 2010. The results showed that BSCs significantly reduced runoff by 37.3% and soil loss by 81.0% and increased infiltration by 12.4% in comparison with BL. However, when combined with STBU or CAKO, BSCs only made negligible contributions to erosion control (a runoff reduction of 7.4% and 5.7% and a soil loss reduction of 0.7% and 0.3%). Generally, the soil moisture of the vegetation plots was lower in the upper layer than that of the BL plots, although when accompanied with a higher amount of infiltration, this soil moisture consumption phenomenon was much clearer when combining vegetation with BSCs. Because of the trivial contributions from BSCs to erosion control and the remaining exacerbated consumption of soil water, moderate disturbance by BSCs should be considered in plots with adequate vegetation cover to improve soil moisture levels without a significant erosion increase, which was implied to be necessary and feasible.

Spatial Analysis of China Province-level Perinatal Mortality

PubMed Central

XIANG, Kun; SONG, Deyong

2016-01-01

Background: Using spatial analysis tools to determine the spatial patterns of China province-level perinatal mortality and using spatial econometric model to examine the impacts of health care resources and different socio-economic factors on perinatal mortality. Methods: The Global Moran’s I index is used to examine whether the spatial autocorrelation exists in selected regions and Moran’s I scatter plot to examine the spatial clustering among regions. Spatial econometric models are used to investigate the spatial relationships between perinatal mortality and contributing factors. Results: The overall Moran’s I index indicates that perinatal mortality displays positive spatial autocorrelation. Moran’s I scatter plot analysis implies that there is a significant clustering of mortality in both high-rate regions and low-rate regions. The spatial econometric models analyses confirm the existence of a direct link between perinatal mortality and health care resources, socio-economic factors. Conclusions: Since a positive spatial autocorrelation has been detected in China province-level perinatal mortality, the upgrading of regional economic development and medical service level will affect the mortality not only in region itself but also its adjacent regions. PMID:27398334

Rainfall simulation experiments: Influence of water temperature, water quality and plot design on soil erosion and runoff

NASA Astrophysics Data System (ADS)

Iserloh, Thomas; Pegoraro, Dominique; Schlösser, Angelika; Thesing, Hannah; Seeger, Manuel; Ries, Johannes B.

2015-04-01

Field rainfall simulators are designed to study soil erosion processes and provide urgently needed data for various geomorphological, hydrological and pedological issues. Due to the different conditions and technologies applied, there are several methodological aspects under review of the scientific community, particularly concerning design, procedures and conditions of measurement for infiltration, runoff and soil erosion. This study aims at contributing fundamental data for understanding rainfall simulations in depth by studying the effect of the following parameters on the measurement results: 1. Plot design - round or rectangular plot: Can we identify differences in amount of runoff and erosion? 2. Water quality: What is the influence of the water's salt load on interrill erosion and infiltration as measured by rainfall experiments? 3. Water temperature: How much are the results conditioned by the temperature of water, which is subject to changes due to environmental conditions during the experiments? Preliminary results show a moderate increase of soil erosion with the water's salt load while runoff stays almost on the same level. With increasing water temperature, runoff increases continuously. At very high temperatures, soil erosion is clearly increased. A first comparison between round and rectangular plot indicates the rectangular plot to be the most suitable plot shape, but ambiguous results make further research necessary. The analysis of these three factors concerning their influence on runoff and erosion shows that clear methodological standards are necessary in order to make rainfall simulation experiments comparable.

Computer systems and methods for visualizing data

DOEpatents

Stolte, Chris; Hanrahan, Patrick

2010-07-13

A method for forming a visual plot using a hierarchical structure of a dataset. The dataset comprises a measure and a dimension. The dimension consists of a plurality of levels. The plurality of levels form a dimension hierarchy. The visual plot is constructed based on a specification. A first level from the plurality of levels is represented by a first component of the visual plot. A second level from the plurality of levels is represented by a second component of the visual plot. The dataset is queried to retrieve data in accordance with the specification. The data includes all or a portion of the dimension and all or a portion of the measure. The visual plot is populated with the retrieved data in accordance with the specification.

Computer systems and methods for visualizing data

DOEpatents

Stolte, Chris; Hanrahan, Patrick

2013-01-29

A method for forming a visual plot using a hierarchical structure of a dataset. The dataset comprises a measure and a dimension. The dimension consists of a plurality of levels. The plurality of levels form a dimension hierarchy. The visual plot is constructed based on a specification. A first level from the plurality of levels is represented by a first component of the visual plot. A second level from the plurality of levels is represented by a second component of the visual plot. The dataset is queried to retrieve data in accordance with the specification. The data includes all or a portion of the dimension and all or a portion of the measure. The visual plot is populated with the retrieved data in accordance with the specification.

Factors that affect proliferation of Salmonella in tomatoes post-harvest: the roles of seasonal effects, irrigation regime, crop and pathogen genotype.

PubMed

Marvasi, Massimiliano; Hochmuth, George J; Giurcanu, Mihai C; George, Andrée S; Noel, Jason T; Bartz, Jerry; Teplitski, Max

2013-01-01

Fresh fruits and vegetables become increasingly recognized as vehicles of human salmonellosis. Physiological, ecological, and environmental factors are all thought to contribute to the ability of Salmonella to colonize fruits and vegetables pre- and post-harvest. The goal of this study was to test how irrigation levels, fruit water congestion, crop and pathogen genotypes affect the ability of Salmonella to multiply in tomatoes post-harvest. Fruits from three tomato varieties, grown over three production seasons in two Florida locations, were infected with seven strains of Salmonella and their ability to multiply post-harvest in field-grown tomatoes was tested. The field experiments were set up as a two-factor factorial split plot experiment, with the whole-plot treatments arranged in a randomized complete-block design. The irrigation treatment (at three levels) was the whole-plot factor, and the split-plot factor was tomato variety, with three levels. The significance of the main, two-way, and three-way interaction effects was tested using the (type III) F-tests for fixed effects. Mean separation for each significant fixed effect in the model was performed using Tukey's multiple comparison testing procedure. The irrigation regime per se did not affect susceptibility of the crop to post-harvest proliferation of Salmonella. However, Salmonella grew significantly better in water-congested tissues of green tomatoes. Tomato maturity and genotype, Salmonella genotype, and inter-seasonal differences were the strongest factors affecting proliferation. Red ripe tomatoes were significantly and consistently more conducive to proliferation of Salmonella. Tomatoes harvested in the driest, sunniest season were the most conducive to post-harvest proliferation of the pathogen. Statistically significant interactions between production conditions affected post-harvest susceptibility of the crop to the pathogen. UV irradiation of tomatoes post-harvest promoted Salmonella growth.

Spatial and temporal effects of drought on soil CO2 efflux in a cacao agroforestry system in Sulawesi, Indonesia

NASA Astrophysics Data System (ADS)

van Straaten, O.; Veldkamp, E.; Köhler, M.; Anas, I.

2010-04-01

Climate change induced droughts pose a serious threat to ecosystems across the tropics and sub-tropics, particularly to those areas not adapted to natural dry periods. In order to study the vulnerability of cacao (Theobroma cacao) - Gliricidia sepium agroforestry plantations to droughts a large scale throughfall displacement roof was built in Central Sulawesi, Indonesia. In this 19-month experiment, we compared soil surface CO2 efflux (soil respiration) from three roof plots with three adjacent control plots. Soil respiration rates peaked at intermediate soil moisture conditions and decreased under increasingly dry conditions (drought induced), or increasingly wet conditions (as evidenced in control plots). The roof plots exhibited a slight decrease in soil respiration compared to the control plots (average 13% decrease). The strength of the drought effect was spatially variable - while some measurement chamber sites reacted strongly (responsive) to the decrease in soil water content (up to R2=0.70) (n=11), others did not react at all (non-responsive) (n=7). A significant correlation was measured between responsive soil respiration chamber sites and sap flux density ratios of cacao (R=0.61) and Gliricidia (R=0.65). Leaf litter CO2 respiration decreased as conditions became drier. The litter layer contributed approximately 3-4% of the total CO2 efflux during dry periods and up to 40% during wet periods. Within days of roof opening soil CO2 efflux rose to control plot levels. Thereafter, CO2 efflux remained comparable between roof and control plots. The cumulative effect on soil CO2 emissions over the duration of the experiment was not significantly different: the control plots respired 11.1±0.5 Mg C ha-1 yr-1, while roof plots respired 10.5±0.5 Mg C ha-1 yr-1. The relatively mild decrease measured in soil CO2 efflux indicates that this agroforestry ecosystem is capable of mitigating droughts with only minor stress symptoms.

Adjusted variable plots for Cox's proportional hazards regression model.

PubMed

Hall, C B; Zeger, S L; Bandeen-Roche, K J

1996-01-01

Adjusted variable plots are useful in linear regression for outlier detection and for qualitative evaluation of the fit of a model. In this paper, we extend adjusted variable plots to Cox's proportional hazards model for possibly censored survival data. We propose three different plots: a risk level adjusted variable (RLAV) plot in which each observation in each risk set appears, a subject level adjusted variable (SLAV) plot in which each subject is represented by one point, and an event level adjusted variable (ELAV) plot in which the entire risk set at each failure event is represented by a single point. The latter two plots are derived from the RLAV by combining multiple points. In each point, the regression coefficient and standard error from a Cox proportional hazards regression is obtained by a simple linear regression through the origin fit to the coordinates of the pictured points. The plots are illustrated with a reanalysis of a dataset of 65 patients with multiple myeloma.

U.S. Forest Greenhouse Gas Impacts of a continued Expansion of E.U. Wood Pellet Demand

NASA Astrophysics Data System (ADS)

Latta, G.; Baker, J.; Ohrel, S. B.

2016-12-01

The United States has ambitious goals of greenhouse gas (GHG) reductions. A portion of these reductions are based on expected contributions from land use, land use change, and forestry (LULUCF). The European Union has similar goals which have resulted in a doubling of wood pellets exported from US ports destined for EU power plants over the last few years. There are potential conflicts between the GHG consequences of this pellet supply and the LULUCF contribution to US GHG goals. This study seeks to inform the discussion by modeling US forest GHG accounts using data measured on a grid of over 150,000 USDA Forest Service, Forest Inventory and Analysis (FIA) forestland plots across the conterminous United States. Empirical yield functions are estimate from plot log volume, biomass and carbon and provide the basis for changes in forest characteristics over time. Demand data based on a spatial database of over 2,000 forest product manufacturing facilities representing 11 intermediate and 13 final solid and pulpwood products. Manufacturing and logging costs are specific to slope, log size, and volume removed along with transportation costs based on fuel prices, FIA plot, and milling locations. The resulting partial spatial equilibrium model of the US forest sector is solved annually for the period 2010 - 2030 with demand shifted by energy prices and macroeconomic indicators from the US EIA's Annual Energy Outlook for a series of potential wood pellet export targets. For each wood pellet export level simulated, figures showing historic and scenario-specific forest products production are generated. Maps of the spatial allocation of both forest harvesting and carbon fluxes are presented at the National level and detail is given in both the US North and Southeast.

Nitrous oxide emission from wetland soil following single and seasonal split application of cattle manure to field tomato (Lycopersicon esculentum, Mill var. Heinz) and rape (Brassica napus, L. var. Giant) crops.

PubMed

Masaka, Johnson; Nyamangara, Justice; Wuta, Menas

2016-01-01

An understanding of the contribution of manure applications to global atmospheric N2O loading is needed to evaluate agriculture's contribution to the global warming process. Two field experiments were carried out at Dufuya wetland (19°17'S; 29°21'E, 1260 m above sea level) to determine the effects of single and split manure applications on emissions of N2O from soil during the growing seasons of two rape and two tomato crops. Two field experiments were established. In the first experiment the manure was applied in three levels of 0, 15, and 30 Mg ha(-1) as a single application just before planting of the first tomato crop. In the second experiment the 15 and 30 Mg ha(-1) manure application rates were divided into four split applications of 3.75 and 7.5 Mg ha(-1) respectively, for each of the four cropping events. Single applications of 15 and 30 Mg ha(-1) manure once in four cropping events had higher emissions of N2O than those recorded on plots that received split applications of 3.75 and 7.5 Mg ha(-1) manure at least up to the second test crop. Thereafter N2O emissions on plots subjected to split applications of manure were higher or equal to those recorded in plots that received single basal applications of 30 Mg ha(-1) applied a week before planting the first crop. Seasonal split applications of manure to wetland vegetable crops can reduce emissions of N2O at least up to the second seasonal split application.

Changes in snag populations in northern Arizona mixed-conifer and ponderosa pine forests, 1997-2002

Treesearch

Joseph L. Ganey; Scott C. Vojta

2005-01-01

Snags (standing dead trees) are important components of forests that contribute to ecological processes and provide habitat for many life forms. We monitored dynamics of snag populations on 1-ha plots in southwestern mixed-conifer (n = 53 plots) and ponderosa pine (Pinus ponderosa, n = 60 plots) forests in north-central Arizona from 1997 to 2002. Of...

Comparison of theoretical proteomes: identification of COGs with conserved and variable pI within the multimodal pI distribution.

PubMed

Nandi, Soumyadeep; Mehra, Nipun; Lynn, Andrew M; Bhattacharya, Alok

2005-09-09

Theoretical proteome analysis, generated by plotting theoretical isoelectric points (pI) against molecular masses of all proteins encoded by the genome show a multimodal distribution for pI. This multimodal distribution is an effect of allowed combinations of the charged amino acids, and not due to evolutionary causes. The variation in this distribution can be correlated to the organisms ecological niche. Contributions to this variation maybe mapped to individual proteins by studying the variation in pI of orthologs across microorganism genomes. The distribution of ortholog pI values showed trimodal distributions for all prokaryotic genomes analyzed, similar to whole proteome plots. Pairwise analysis of pI variation show that a few COGs are conserved within, but most vary between, the acidic and basic regions of the distribution, while molecular mass is more highly conserved. At the level of functional grouping of orthologs, five groups vary significantly from the population of orthologs, which is attributed to either conservation at the level of sequences or a bias for either positively or negatively charged residues contributing to the function. Individual COGs conserved in both the acidic and basic regions of the trimodal distribution are identified, and orthologs that best represent the variation in levels of the acidic and basic regions are listed. The analysis of pI distribution by using orthologs provides a basis for resolution of theoretical proteome comparison at the level of individual proteins. Orthologs identified that significantly vary between the major acidic and basic regions maybe used as representative of the variation of the entire proteome.

Structural and electronic properties of LaPd2As2 superconductor: First-principle calculations

NASA Astrophysics Data System (ADS)

Singh, Birender; Kumar, Pradeep

2017-05-01

In present work we have studied electronic and structural properties of superconducting LaPd2As2 compound having collapsed tetragonal structure using first-principle calculations. The band structure calculations show that the LaPd2As2 is metallic consistent with the reported experimental observation, and the density of states plots clearly shows that at the Fermi level major contribution to density of states arises from Pd 4d and As 4p states, unlike the Fe-based superconductors where major contribution at the Fermi level comes from Fe 3d states. The estimated value of electron-phonon coupling is found to be 0.37, which gives the upper bound of superconducting transition temperature of 5K, suggesting the conventional nature of this superconductor.

Light-induced diurnal pattern of methane exchange in a boreal forest

NASA Astrophysics Data System (ADS)

Sundqvist, Elin; Crill, Patrick; Mölder, Meelis; Vestin, Patrik; Lindroth, Anders

2013-04-01

Boreal forests represents one third of the Earth's forested land surface area and is a net sink of methane and an important component of the atmospheric methane budget. Methane is oxidized in well-aerated forest soils whereas ponds and bog soils are sources of methane. Besides the microbial processes in the soil also forest vegetation might contribute to methane exchange. Due to a recent finding of methane consumption by boreal plants that correlated with photosynthetic active radiation (PAR), we investigate the impact of PAR on soil methane exchange at vegetated plots on the forest floor. The study site, Norunda in central Sweden, is a 120 years old boreal forest stand, dominated by Scots pine and Norway spruce. We used continuous chamber measurements in combination with a high precision laser gas analyzer (Los Gatos Research), to measure the methane exchange at four different plots in July-November 2009, and April-June 2010. The ground vegetation consisted almost entirely of mosses and blueberry-shrubs. Two of the plots acted as stable sinks of methane whereas the other two plots shifted from sinks to sources during very wet periods. The preliminary results show a clear diurnal pattern of the methane exchange during the growing season, which cannot be explained by temperature. The highest consumption occurs at high PAR levels. The amplitude of the diurnal methane exchange during the growing season is in the order of 10 μmol m-2 h-1. This indicates that besides methane oxidation by methanotrophs in the soil there is an additional removal of methane at soil level by a process related to ground vegetation.

Updating older forest inventory data with a growth model and satellite records to improve the responsiveness and currency of national carbon monitoring

NASA Astrophysics Data System (ADS)

Healey, S. P.; Zhao, F. R.; McCarter, J. B.; Frescino, T.; Goeking, S.

2017-12-01

International reporting of American forest carbon trends depends upon the Forest Service's nationally consistent network of inventory plots. Plots are measured on a rolling basis over a 5- to 10-year cycle, so estimates related to any variable, including carbon storage, reflect conditions over a 5- to 10-year window. This makes it difficult to identify the carbon impact of discrete events (e.g., a bad fire year; extraction rates related to home-building trends), particularly if the events are recent.We report an approach to make inventory estimates more sensitive to discrete and recent events. We use a growth model (the Forest Vegetation Simulator - FVS) that is maintained by the Forest Service to annually update the tree list for every plot, allowing all plots to contribute to a series of single-year estimates. Satellite imagery from the Landsat platform guides the FVS simulations by providing information about which plots have been disturbed, which are recovering from disturbance, and which are undergoing undisturbed growth. The FVS model is only used to "update" plot tree lists until the next field measurement is made (maximum of 9 years). As a result, predicted changes are usually small and error rates are low. We present a pilot study of this system in Idaho, which has experienced several major fire events in the last decade. Empirical estimates of uncertainty, accounting for both plot sampling error and FVS model error, suggest that this approach greatly increases temporal specificity and sensitivity to discrete events without sacrificing much estimate precision at the level of a US state. This approach has the potential to take better advantage of the Forest Service's rolling plot measurement schedule to report carbon storage in the US, and it offers the basis of a system that might allow near-term, forward-looking analysis of the effects of hypothetical forest disturbance patterns.

Using a C4 Invasive Grass to Isolate the Role of Detrital Carbon versus Rhizodeposit Carbon in Supplying Soil Carbon Pools

NASA Astrophysics Data System (ADS)

Sokol, N.; Bradford, M.

2016-12-01

Plant inputs are the primary sources of carbon (C) to soil organic carbon (SOC) pools. Historically, detrital plant sources were thought to dominate C supply to SOC pools. An emerging body of research highlights the previously underestimated role of root exudates and other rhizodeposits. However, few experimental field studies have directly tracked the relative contributions of rhizodeposits versus detritial C inputs into different SOC pools, due to how methodologically challenging they are to measure in a field setting. Here, I present the first 3 years of data from an experimental field study of the prolific, C4 invasive grass species Microstegium vimineum. I use its unique isotopic signature in plots manipulated to contain detrital-only and rhizodeposit-only inputs, to track their relative contributions into microbial biomass C, particulate organic C (POC; >53 um) and mineral-associated organic C (MIN C; <53 um) soil pools. After 3 years, the presence of M. vimineum significantly affected both total SOC and the proportion of M. vimineum-derived C in POC pools. Both detrital inputs and rhizodeposit inputs from M. vimineum caused an increase in total SOC. Total SOC was 38% greater in detrital-only plots compared to control plots, and 39% greater in rhizodeposit-only plots compared to control plots. The proportion of M. vimineum-derived C in the POC was pool was 32% greater in rhizodeposit-only plots compared to detrital-only plots. The proportion of M.vimineum-derived C in the MIN C pool was not significantly different between treatments (at p<0.05). Microbial biomass was highest in rhizodeposit-only plots (p=0.03). Overall, plots containing rhizodeposit-only inputs contributed more Microstegium-derived C than did plots containing detrital-only inputs. While this observation is consistent with emerging theory on the primacy of the belowground, root-associated pathway in supplying C to soil C pools, this increase is generally assumed to be through the MIN C pool due to 1) the lower molecular weight of rhizodeposit compounds, and 2) the close physical association between rhizodeposits and soil mineral surfaces. Our results point to an underappreciated, central role of the POM C pool as a passageway for both detrital and rhizodeposit C inputs to the soil.

Ecological Importance of Small-Diameter Trees to the Structure, Diversity and Biomass of a Tropical Evergreen Forest at Rabi, Gabon.

PubMed

Memiaghe, Hervé R; Lutz, James A; Korte, Lisa; Alonso, Alfonso; Kenfack, David

2016-01-01

Tropical forests have long been recognized for their biodiversity and ecosystem services. Despite their importance, tropical forests, and particularly those of central Africa, remain understudied. Until recently, most forest inventories in Central Africa have focused on trees ≥10 cm in diameter, even though several studies have shown that small-diameter tree population may be important to demographic rates and nutrient cycling. To determine the ecological importance of small-diameter trees in central African forests, we used data from a 25-ha permanent plot that we established in the rainforest of Gabon to study the diversity and dynamics of these forests. Within the plot, we censused 175,830 trees ≥1 cm dbh from 54 families, 192 genera, and 345 species. Average tree density was 7,026 trees/ha, basal area 31.64 m2/ha, and above-ground biomass 369.40 Mg/ha. Fabaceae, Ebenaceae and Euphorbiaceae were the most important families by basal area, density and above-ground biomass. Small-diameter trees (1 cm ≥ dbh <10 cm) comprised 93.7% of the total tree population, 16.5% of basal area, and 4.8% of the above-ground biomass. They also had diversity 18% higher at family level, 34% higher at genus level, and 42% higher at species level than trees ≥10 cm dbh. Although the relative contribution of small-diameter trees to biomass was comparable to other forests globally, their contribution to forest density, and diversity was disproportionately higher. The high levels of diversity within small-diameter classes may give these forests high levels of structural resilience to anthropogenic/natural disturbance and a changing climate.

Ecological Importance of Small-Diameter Trees to the Structure, Diversity and Biomass of a Tropical Evergreen Forest at Rabi, Gabon

PubMed Central

Memiaghe, Hervé R.; Lutz, James A.; Korte, Lisa; Alonso, Alfonso; Kenfack, David

2016-01-01

Tropical forests have long been recognized for their biodiversity and ecosystem services. Despite their importance, tropical forests, and particularly those of central Africa, remain understudied. Until recently, most forest inventories in Central Africa have focused on trees ≥10 cm in diameter, even though several studies have shown that small-diameter tree population may be important to demographic rates and nutrient cycling. To determine the ecological importance of small-diameter trees in central African forests, we used data from a 25-ha permanent plot that we established in the rainforest of Gabon to study the diversity and dynamics of these forests. Within the plot, we censused 175,830 trees ≥1 cm dbh from 54 families, 192 genera, and 345 species. Average tree density was 7,026 trees/ha, basal area 31.64 m2/ha, and above-ground biomass 369.40 Mg/ha. Fabaceae, Ebenaceae and Euphorbiaceae were the most important families by basal area, density and above-ground biomass. Small-diameter trees (1 cm ≥ dbh <10 cm) comprised 93.7% of the total tree population, 16.5% of basal area, and 4.8% of the above-ground biomass. They also had diversity 18% higher at family level, 34% higher at genus level, and 42% higher at species level than trees ≥10 cm dbh. Although the relative contribution of small-diameter trees to biomass was comparable to other forests globally, their contribution to forest density, and diversity was disproportionately higher. The high levels of diversity within small-diameter classes may give these forests high levels of structural resilience to anthropogenic/natural disturbance and a changing climate. PMID:27186658

Improving LiDAR Biomass Model Uncertainty through Non-Destructive Allometry and Plot-level 3D Reconstruction with Terrestrial Laser Scanning

NASA Astrophysics Data System (ADS)

Stovall, A. E.; Shugart, H. H., Jr.

2017-12-01

Future NASA and ESA satellite missions plan to better quantify global carbon through detailed observations of forest structure, but ultimately rely on uncertain ground measurement approaches for calibration and validation. A significant amount of the uncertainty in estimating plot-level biomass can be attributed to inadequate and unrepresentative allometric relationships used to convert plot-level tree measurements to estimates of aboveground biomass. These allometric equations are known to have high errors and biases, particularly in carbon rich forests because they were calibrated with small and often biased samples of destructively harvested trees. To overcome this issue, a non-destructive methodology for estimating tree and plot-level biomass has been proposed through the use of Terrestrial Laser Scanning (TLS). We investigated the potential for using TLS as a ground validation approach in LiDAR-based biomass mapping though virtual plot-level tree volume reconstruction and biomass estimation. Plot-level biomass estimates were compared on the Virginia-based Smithsonian Conservation Biology Institute's SIGEO forest with full 3D reconstruction, TLS allometry, and Jenkins et al. (2003) allometry. On average, full 3D reconstruction ultimately provided the lowest uncertainty estimate of plot-level biomass (9.6%), followed by TLS allometry (16.9%) and the national equations (20.2%). TLS offered modest improvements to the airborne LiDAR empirical models, reducing RMSE from 16.2% to 14%. Our findings suggest TLS plot acquisitions and non-destructive allometry can play a vital role for reducing uncertainty in calibration and validation data for biomass mapping in the upcoming NASA and ESA missions.

Calibration of multivariate scatter plots for exploratory analysis of relations within and between sets of variables in genomic research.

PubMed

Graffelman, Jan; van Eeuwijk, Fred

2005-12-01

The scatter plot is a well known and easily applicable graphical tool to explore relationships between two quantitative variables. For the exploration of relations between multiple variables, generalisations of the scatter plot are useful. We present an overview of multivariate scatter plots focussing on the following situations. Firstly, we look at a scatter plot for portraying relations between quantitative variables within one data matrix. Secondly, we discuss a similar plot for the case of qualitative variables. Thirdly, we describe scatter plots for the relationships between two sets of variables where we focus on correlations. Finally, we treat plots of the relationships between multiple response and predictor variables, focussing on the matrix of regression coefficients. We will present both known and new results, where an important original contribution concerns a procedure for the inclusion of scales for the variables in multivariate scatter plots. We provide software for drawing such scales. We illustrate the construction and interpretation of the plots by means of examples on data collected in a genomic research program on taste in tomato.

Measurement of surface water runoff from plots of two different sizes

NASA Astrophysics Data System (ADS)

Joel, Abraham; Messing, Ingmar; Seguel, Oscar; Casanova, Manuel

2002-05-01

Intensities and amounts of water infiltration and runoff on sloping land are governed by the rainfall pattern and soil hydraulic conductivity, as well as by the microtopography and soil surface conditions. These components are closely interrelated and occur simultaneously, and their particular contribution may change during a rainfall event, or their effects may vary at different field scales. The scale effect on the process of infiltration/runoff was studied under natural field and rainfall conditions for two plot sizes: small plots of 0·25 m2 and large plots of 50 m2. The measurements were carried out in the central region of Chile in a piedmont most recently used as natural pastureland. Three blocks, each having one large plot and five small plots, were established. Cumulative rainfall and runoff quantities were sampled every 5 min. Significant variations in runoff responses to rainfall rates were found for the two plot sizes. On average, large plots yielded only 40% of runoff quantities produced on small plots per unit area. This difference between plot sizes was observed even during periods of continuous runoff.

Visualizing the deep end of sound: plotting multi-parameter results from infrasound data analysis

NASA Astrophysics Data System (ADS)

Perttu, A. B.; Taisne, B.

2016-12-01

Infrasound is sound below the threshold of human hearing: approximately 20 Hz. The field of infrasound research, like other waveform based fields relies on several standard processing methods and data visualizations, including waveform plots and spectrograms. The installation of the International Monitoring System (IMS) global network of infrasound arrays, contributed to the resurgence of infrasound research. Array processing is an important method used in infrasound research, however, this method produces data sets with a large number of parameters, and requires innovative plotting techniques. The goal in designing new figures is to be able to present easily comprehendible, and information-rich plots by careful selection of data density and plotting methods.

Effect of clonal reproduction on genetic structure in Pentaclethra macroloba (Fabaceae: Mimosoideae).

PubMed

Gaddis, Keith D; Zukin, Helen L; Dieterich, Inca A; Braker, Elizabeth; Sork, Victoria L

2014-06-01

The existence of monodominant forests on well-drained soils in tropical regions has been widely reported. Such forests most likely result from a combination of both ecological and evolutionary factors. Under conditions of high seed and seedling mortality, vegetative reproduction could create a reproductive advantage leading to forest dominance, and profoundly affect the distribution of genetic variation in a clonal species. We investigated these effects in a low diversity forest site in Northeastern Costa Rica dominated by the species Pentaclethra macroloba, which sprouts from the root mass of fallen trees and from snapped trunks. We examined the population structure of juvenile P. macroloba growing in different soil types and across an elevational gradient. Using seven molecular markers, we genotyped 173 juvenile P. macroloba from 18 plots (six plots in seasonally inundated swamps, and 12 plots in upland non-swamp) spanning 50-300m in elevation at La Selva Biological Station and the adjacent Reserva Ecológica Bijagual in Northeastern Costa Rica. We answered two specific questions: (1) How extensive is clonal reproduction? and (2) what is the distribution of genetic diversity and structure? We found that clonal reproduction occurred exclusively within inundated swamp areas. However, there was no significant difference between genetic diversity measures in swamp and non-swamp plots, which were both generally low when compared with other tropical forest species. Genetic structure was significant across all plots (F(ST) = -0.109). However, genetic structure among swamp plots (F(ST) = 0.128) was higher than among non-swamp upland plots (F(ST) = 0.093). Additionally, spatial autocorrelation among individuals within non-swamp upland plots was significant from the 25 to 100m spatial scale, but not within swamp plots. The degree of overall genetic structure we found in P. macroloba is high for a tropical forest tree. The incidence of clonal reproduction is a contributing factor in genetic differentiation, but the high structure among plots without clonal reproduction indicates that other factors contribute as well.

A Scoping Study of Water Quality Conditions in the Missouri National Recreational River Reach from Near Gavins Point Dam to Ponca State Park, Nebraska

DTIC Science & Technology

2002-03-01

37 Plate 12. Box plots of turbidity, total suspended solids, and chlorophyll a levels for the...38 Plate 13. Box plots of turbidity, total suspended solids, and chlorophyll a levels for the...39 Plate 14. Box plots of turbidity, total suspended solids, and chlorophyll a levels for the backwater and

Hydrologic behavior of two engineered barriers following extreme wetting.

PubMed

Porro, I

2001-01-01

Many engineered barriers are expected to function for hundreds of years or longer. Over the course of time, it is likely that some barriers will experience infiltration to the point of breakthrough. This study compares the recovery from breakthrough of two storage-evapotranspiration type engineered barriers. Replicates of test plots comprising thick soil and capillary-biobarrier covers were wetted to breakthrough in 1997. Test plots were kept cleared of vegetation to maximize hydrologic stress during recovery. Following cessation of drainage resulting from the wetting irrigations, water storage levels in all plots were at elevated levels compared with pre-irrigation levels. As a result, infiltration of melting snow during the subsequent spring overloaded the storage capacity and produced drainage in all plots. Relatively rapid melting of accumulated snowfall produced the most significant infiltration events each year during the study. Capillary barriers yielded less total drainage than thick soil barriers. By limiting drainage, capillary barriers increased water storage in the upper portions of the test plots, which led to increased evaporation from the capillary barrier plots compared with thick soil plots. Increased evaporation in the capillary barrier plots allowed more water to infiltrate in the second season following the wetting tests without triggering drainage. All thick soil plots again yielded drainage in the second season. Within two years of intentionally induced breakthrough, evaporation alone (without transpiration) restored the capability of the capillary barrier covers to function as intended, although water storage in these covers remained at elevated levels.

Factors That Affect Proliferation of Salmonella in Tomatoes Post-Harvest: The Roles of Seasonal Effects, Irrigation Regime, Crop and Pathogen Genotype

PubMed Central

Marvasi, Massimiliano; Hochmuth, George J.; Giurcanu, Mihai C.; George, Andrée S.; Noel, Jason T.; Bartz, Jerry; Teplitski, Max

2013-01-01

Main Objectives Fresh fruits and vegetables become increasingly recognized as vehicles of human salmonellosis. Physiological, ecological, and environmental factors are all thought to contribute to the ability of Salmonella to colonize fruits and vegetables pre- and post-harvest. The goal of this study was to test how irrigation levels, fruit water congestion, crop and pathogen genotypes affect the ability of Salmonella to multiply in tomatoes post-harvest. Experimental Design Fruits from three tomato varieties, grown over three production seasons in two Florida locations, were infected with seven strains of Salmonella and their ability to multiply post-harvest in field-grown tomatoes was tested. The field experiments were set up as a two-factor factorial split plot experiment, with the whole-plot treatments arranged in a randomized complete-block design. The irrigation treatment (at three levels) was the whole-plot factor, and the split-plot factor was tomato variety, with three levels. The significance of the main, two-way, and three-way interaction effects was tested using the (type III) F-tests for fixed effects. Mean separation for each significant fixed effect in the model was performed using Tukey’s multiple comparison testing procedure. Most Important Discoveries and Significance The irrigation regime per se did not affect susceptibility of the crop to post-harvest proliferation of Salmonella. However, Salmonella grew significantly better in water-congested tissues of green tomatoes. Tomato maturity and genotype, Salmonella genotype, and inter-seasonal differences were the strongest factors affecting proliferation. Red ripe tomatoes were significantly and consistently more conducive to proliferation of Salmonella. Tomatoes harvested in the driest, sunniest season were the most conducive to post-harvest proliferation of the pathogen. Statistically significant interactions between production conditions affected post-harvest susceptibility of the crop to the pathogen. UV irradiation of tomatoes post-harvest promoted Salmonella growth. PMID:24324640

Comparison of theoretical proteomes: Identification of COGs with conserved and variable pI within the multimodal pI distribution

PubMed Central

Nandi, Soumyadeep; Mehra, Nipun; Lynn, Andrew M; Bhattacharya, Alok

2005-01-01

Background Theoretical proteome analysis, generated by plotting theoretical isoelectric points (pI) against molecular masses of all proteins encoded by the genome show a multimodal distribution for pI. This multimodal distribution is an effect of allowed combinations of the charged amino acids, and not due to evolutionary causes. The variation in this distribution can be correlated to the organisms ecological niche. Contributions to this variation maybe mapped to individual proteins by studying the variation in pI of orthologs across microorganism genomes. Results The distribution of ortholog pI values showed trimodal distributions for all prokaryotic genomes analyzed, similar to whole proteome plots. Pairwise analysis of pI variation show that a few COGs are conserved within, but most vary between, the acidic and basic regions of the distribution, while molecular mass is more highly conserved. At the level of functional grouping of orthologs, five groups vary significantly from the population of orthologs, which is attributed to either conservation at the level of sequences or a bias for either positively or negatively charged residues contributing to the function. Individual COGs conserved in both the acidic and basic regions of the trimodal distribution are identified, and orthologs that best represent the variation in levels of the acidic and basic regions are listed. Conclusion The analysis of pI distribution by using orthologs provides a basis for resolution of theoretical proteome comparison at the level of individual proteins. Orthologs identified that significantly vary between the major acidic and basic regions maybe used as representative of the variation of the entire proteome. PMID:16150155

The effect of increased air humidity on fine root and rhizome biomass and turnover of silver birch forest ecosystem - a FAHM study.

NASA Astrophysics Data System (ADS)

Ostonen, I.; Kupper, P.; Sõber, J.; Aosaar, J.; Varik, M.; Lõhmus, K.

2012-04-01

A facility for free air humidity manipulation (FAHM) was established to investigate the effect of increased air humidity on belowground biomass and turnover in silver birch (Betula pendula Roth.) forest ecosystems with respect to rising air humidity predicted for Northern Europe. Fine root and rhizomes are short-lived and recognized as the most important component contributing to below-ground C fluxes in forests. The FAHM system enables air relative humidity to be increased on average 7 units (%) over the ambient level during mist fumigation. The experimental site contains humidified (H) and control (C) plots; each plot contains sectors with diverse "forest" understory and early successional grasses. The trees were planted in 2006, humidification started in spring 2008, and soil cores to study fine root and rhizome biomass and turnover were taken in 2007, 2009 and 2010. In July 2009, total fine root and rhizome biomass was 8 tons per ha in C and 16 tons per ha in H plots. The roots of understory formed 86% in C and 93% H plots, respectively. Our preliminary data suggest that the increased humidity affected more the roots of understory plants: fine root and rhizome biomass and production increased approximately twice by increasing air humidity. However, the tendency was similar for fine root biomass and production of silver birch. Fine root turnover speeded up for both silver birch and understory roots in H plots. Hence, changes in air humidity can significantly affect forest carbon cycling.

Atmospheric deposition and ozone levels in Swiss forests: are critical values exceeded?

PubMed

Waldner, Peter; Schaub, Marcus; Graf Pannatier, Elisabeth; Schmitt, Maria; Thimonier, Anne; Walthert, Lorenz

2007-05-01

Air pollution affects forest health through atmospheric deposition of acidic and nitrogen compounds and elevated levels of tropospheric ozone (O3). In 1985, a monitoring network was established across Europe and various research efforts have since been undertaken to define critical values. We measured atmospheric deposition of acidity and nitrogen as well as ambient levels of O3 on 12, 13, and 14 plots, respectively, in the framework of the Swiss Long-Term Forest Ecosystem Research (LWF) in the period from 1995 to 2002. We estimated the critical loads of acidity and of nitrogen, using the steady state mass balance approach, and calculated the critical O3 levels using the AOT40 approach. The deposition of acidity exceeded the critical loads on 2 plots and almost reached them on 4 plots. The median of the measured molar ratio of base nutrient cations to total dissolved aluminium (Bc/Al) in the soil solution was higher than the critical value of 1 for all depths, and also at the plots with an exceedance of the critical load of acidity. For nitrogen, critical loads were exceeded on 8 plots and deposition likely represents a long-term ecological risk on 3 to 10 plots. For O3, exceedance of critical levels was recorded on 12 plots, and led to the development of typical O3-induced visible injury on trees and shrubs, but not for all plots due to (1) the site specific composition of O3 sensitive and tolerant plant species, and (2) the influence of microclimatic site conditions on the stomatal behaviour, i.e., O3 uptake.

LevelScheme: A level scheme drawing and scientific figure preparation system for Mathematica

NASA Astrophysics Data System (ADS)

Caprio, M. A.

2005-09-01

LevelScheme is a scientific figure preparation system for Mathematica. The main emphasis is upon the construction of level schemes, or level energy diagrams, as used in nuclear, atomic, molecular, and hadronic physics. LevelScheme also provides a general infrastructure for the preparation of publication-quality figures, including support for multipanel and inset plotting, customizable tick mark generation, and various drawing and labeling tasks. Coupled with Mathematica's plotting functions and powerful programming language, LevelScheme provides a flexible system for the creation of figures combining diagrams, mathematical plots, and data plots. Program summaryTitle of program:LevelScheme Catalogue identifier:ADVZ Program obtainable from: CPC Program Library, Queen's University of Belfast, N. Ireland Program summary URL:http://cpc.cs.qub.ac.uk/summaries/ADVZ Operating systems:Any which supports Mathematica; tested under Microsoft Windows XP, Macintosh OS X, and Linux Programming language used:Mathematica 4 Number of bytes in distributed program, including test and documentation:3 051 807 Distribution format:tar.gz Nature of problem:Creation of level scheme diagrams. Creation of publication-quality multipart figures incorporating diagrams and plots. Method of solution:A set of Mathematica packages has been developed, providing a library of level scheme drawing objects, tools for figure construction and labeling, and control code for producing the graphics.

Stocking equations for regeneration in mixed oak stands

Treesearch

Songlin Fei; Kim C. Steiner; James C. Finley

2007-01-01

Regeneration stocking equations for mixed-oak stands were developed based on data collected from nearly 14,000 plots in the central Appalachians. Maximum stand density was identified by plotting aggregate height against number of seedlings per plot, and was used as the reference level of the average maximum stand density (100 percent stocking or A-level stocking)....

Segmented Poincaré plot analysis for risk stratification in patients with dilated cardiomyopathy.

PubMed

Voss, A; Fischer, C; Schroeder, R; Figulla, H R; Goernig, M

2010-01-01

The prognostic value of heart rate variability in patients with dilated cardiomyopathy (DCM) is limited and does not contribute to risk stratification although the dynamics of ventricular repolarization differs considerably between DCM patients and healthy subjects. Neither linear nor nonlinear methods of heart rate variability analysis could discriminate between patients at high and low risk for sudden cardiac death. The aim of this study was to analyze the suitability of the new developed segmented Poincaré plot analysis (SPPA) to enhance risk stratification in DCM. In contrast to the usual applied Poincaré plot analysis the SPPA retains nonlinear features from investigated beat-to-beat interval time series. Main features of SPPA are the rotation of cloud of points and their succeeded variability depended segmentation. Significant row and column probabilities were calculated from the segments and led to discrimination (up to p<0.005) between low and high risk in DCM patients. For the first time an index from Poincaré plot analysis of heart rate variability was able to contribute to risk stratification in patients suffering from DCM.

Population dynamics of hispid cotton rats (Sigmodon hispidus) across a nitrogen-amended landscape

USGS Publications Warehouse

Clark, J.E.; Hellgren, E.C.; Jorgensen, E.E.; Tunnell, S.J.; Engle, David M.; Leslie, David M.

2003-01-01

We conducted a mark-recapture experiment to examine the population dynamics of hispid cotton rats (Sigmodon hispidus) in response to low-level nitrogen amendments (16.4 kg nitrogen/ha per year) and exclosure fencing in an old-field grassland. The experimental design consisted of sixteen 0.16-ha plots with 4 replicates of each treatment combination. We predicted that densities, reproductive success, movement probabilities, and survival rates of cotton rats would be greater on nitrogen-amended plots because of greater aboveground biomass and canopy cover. Population densities of cotton rats tended to be highest on fenced nitrogen plots, but densities on unfenced nitrogen plots were similar to those on control and fenced plots. We observed no distinct patterns in survival rates, reproductive success, or movement probabilities with regard to nitrogen treatments. However, survival rates and reproductive success tended to be higher for cotton rats on fenced plots than for those on unfenced plots and this was likely attributable to decreased predation on fenced plots. As low-level nitrogen amendments continue to be applied, we predict that survival, reproduction, and population-growth rates of cotton rats on control plots, especially fenced plots with no nitrogen amendment, will eventually exceed those on nitrogen-amended plots as a result of higher plant-species diversity, greater food availability, and better quality cover.

Program Aids Creation Of X-Y Plots

NASA Technical Reports Server (NTRS)

Jeletic, James F.

1993-01-01

VEGAS computer program enables application programmers to create X-Y plots in various modes through high-level subroutine calls. Modes consist of passive, autoupdate, and interactive modes. In passive mode, VEGAS takes input data, produces plot, and returns control to application program. In autoupdate mode, forms plots and automatically updates them as more information received. In interactive mode, displays plot and provides popup menus for user to alter appearance of plot or to modify data. Written in FORTRAN 77.

Toward a clearer portrayal of confounding bias in instrumental variable applications.

PubMed

Jackson, John W; Swanson, Sonja A

2015-07-01

Recommendations for reporting instrumental variable analyses often include presenting the balance of covariates across levels of the proposed instrument and levels of the treatment. However, such presentation can be misleading as relatively small imbalances among covariates across levels of the instrument can result in greater bias because of bias amplification. We introduce bias plots and bias component plots as alternative tools for understanding biases in instrumental variable analyses. Using previously published data on proposed preference-based, geography-based, and distance-based instruments, we demonstrate why presenting covariate balance alone can be problematic, and how bias component plots can provide more accurate context for bias from omitting a covariate from an instrumental variable versus non-instrumental variable analysis. These plots can also provide relevant comparisons of different proposed instruments considered in the same data. Adaptable code is provided for creating the plots.

A preliminary study of effects of feral pig density on native Hawaiian montane rainforest vegetation

USGS Publications Warehouse

Scheffler, Pamela Y.; Pratt, Linda; Foote, David; Magnacca, Karl

2012-01-01

This study aimed to examine the effects of different levels of pig density on native Hawaiian forest vegetation. Pig sign was measured across four pig management units in the 'Öla'a Forest from 1998 through 2004 and pig density estimated based upon pig activity. Six paired vegetation monitoring plots were established in the units, each pair straddling a pig fence. Percent cover and species richness of understory vegetation, ground cover, alien species, and preferred pig forage plants were measured in 1997 and 2003 and compared with pig density estimates. Rainfall and hunting effort and success by management personnel were also tracked over the study period. Vegetation monitoring found a higher percentage of native plants in pig-free or low-pig areas compared to those with medium or high pig densities, with no significant change in the percent native plant species between the first and second monitoring periods. Differences between plots were strongly affected by location, with a higher percentage of native plants in western plots, where pig damage has historically been lower. Expansion of this survey with more plots would help improve the statistical power to detect differences in vegetation caused by pigs. Because of the limited vegetation sampling in this study, the results must be viewed as descriptive. We compare the vegetation within 30 x 30 m plots across three thresholds of historical pig density and show how pig densities can change in unanticipated directions within management units. While these results cannot be extrapolated to area-wide effects of pig activity, these data do contribute to a growing body of information on the impacts of feral pigs on Hawaiian plant communities.

Advances in the use of DNA barcodes to build a community phylogeny for tropical trees in a Puerto Rican forest dynamics plot.

PubMed

Kress, W John; Erickson, David L; Swenson, Nathan G; Thompson, Jill; Uriarte, Maria; Zimmerman, Jess K

2010-11-09

Species number, functional traits, and phylogenetic history all contribute to characterizing the biological diversity in plant communities. The phylogenetic component of diversity has been particularly difficult to quantify in species-rich tropical tree assemblages. The compilation of previously published (and often incomplete) data on evolutionary relationships of species into a composite phylogeny of the taxa in a forest, through such programs as Phylomatic, has proven useful in building community phylogenies although often of limited resolution. Recently, DNA barcodes have been used to construct a robust community phylogeny for nearly 300 tree species in a forest dynamics plot in Panama using a supermatrix method. In that study sequence data from three barcode loci were used to generate a well-resolved species-level phylogeny. Here we expand upon this earlier investigation and present results on the use of a phylogenetic constraint tree to generate a community phylogeny for a diverse, tropical forest dynamics plot in Puerto Rico. This enhanced method of phylogenetic reconstruction insures the congruence of the barcode phylogeny with broadly accepted hypotheses on the phylogeny of flowering plants (i.e., APG III) regardless of the number and taxonomic breadth of the taxa sampled. We also compare maximum parsimony versus maximum likelihood estimates of community phylogenetic relationships as well as evaluate the effectiveness of one- versus two- versus three-gene barcodes in resolving community evolutionary history. As first demonstrated in the Panamanian forest dynamics plot, the results for the Puerto Rican plot illustrate that highly resolved phylogenies derived from DNA barcode sequence data combined with a constraint tree based on APG III are particularly useful in comparative analysis of phylogenetic diversity and will enhance research on the interface between community ecology and evolution.

Effects of winter manure application in Ohio on the quality of surface runoff.

PubMed

Owens, L B; Bonta, J V; Shipitalo, M J; Rogers, S

2011-01-01

Winter application of manure poses environmental risks. Seven continuous corn, instrumented watersheds (approximately 1 ha each) at the USDA-ARS North Appalachian Experimental Watershed research station near Coshocton, Ohio were used to evaluate the environmental impacts of winter manure application when using some of the Ohio Natural Resources Conservation Service recommendations. For 3 yr on frozen, sometimes snow-covered, ground in January or February, two watersheds received turkey litter, two received liquid swine manure, and three were control plots that received N fertilizer at planting (not manure). Manure was applied at an N rate for corn; the target level was 180 kg N ha(-1) with a 30-m setback from the application area to the bottom of each watershed. Four grassed plots (61 x 12 m) were used for beef slurry application (9.1 Mg ha(-1) wet weight); two plots had 61 x 12 m grassed filter areas below them, and two plots had 30 x 12 m filter areas. There were two control plots. Nutrient concentrations were sometimes high, especially in runoff soon after application. However, most events with high concentrations occurred with low flow volumes; therefore, transport was minimal. Applying manure at the N rate for crop needs resulted in excess application of P. Elevated P losses contributed to a greater potential of detrimental environmental impacts with P than with N. Filter strips reduced nutrient concentrations and transport, but the data were too limited to compare the effectiveness of the 30- and 61-m filter strips. Winter application of manure is not ideal, but by following prescribed guidelines, detrimental environmental impacts can be reduced.

Soil Organic Carbon Sources of Respired CO2 in a Mid-successional North Temperate Forest

NASA Astrophysics Data System (ADS)

Medina, N. L.; Hatton, P. J.; Le Moine, J.; Nadelhoffer, K. J.

2015-12-01

Given that soil organic matter (SOM) is the largest global terrestrial carbon (C) pool, some fractions of which have turnover times of centuries to millennia, it is critical to understand the mechanisms by which higher net primary productivity (NPP) and higher litter inputs, in the future, as predicted by some models, might alter the potentials of forest soils to serve as long-term C sinks. Here, we use a 10-year-old site in the DIRT (Detritus Input and Removal Treatments) network of litter manipulations to compare plots in a forested, northern-temperate sandy soil that were subjected to double-leaf-litter additions (DL) and both root- and leaf-litter removals (no inputs, NI) to non-manipulated controls. Previous data show that rather than increasing soil organic carbon (SOC) stocks, plots receiving doubled litter inputs lose SOC at rates similar to losses in Control soils. To trace the source of extra mineralized SOC, we analyzed field CO2 effluxes for δ13C and characterized SOC of varying degrees of organo-mineral association with sequential density fractionations. Soils in DL plots respired significantly faster (p=0.095) and proportionally more (p=0.015) than control soils over the course of July, August, and October 2014. This suggests a greater fresh litter contribution to soil efflux in DL than in Control plots after 10 years of treatment. Preliminary data show that intermediate (1.85 - 2.4 g/mL) and dense (>2.4 g/mL) fractions are relatively larger in DL than in Control soils. This suggests that the addition C from doubled litter could be more rapidly transferred into those more dense fractions, or that higher litter inputs prime the decomposition of lighter particulate SOC forms, leading to a relative increase of the dense organo-mineral associations. Using δ13C values to parameterize a multi-source mixing model, we partition the fate of both fresh litter and partially-decomposed SOC and will present on the modeled relative contributions of various sources to field CO2 effluxes from diverse treatments. Our preliminary data and expected results may suggest important contributions from mineral-associated SOC, rather than simply from free SOC, to seasonal field soil respiration. Thus, with higher litterfall rates, C that similar forest soils sequester may exhibit shorter ecosystem-level residence times.

Risks and benefits of gardening in urban soil; heavy metals and nutrient content in Los Angeles Community Gardens

NASA Astrophysics Data System (ADS)

Clarke, L. W.; Jenerette, D.; Bain, D. J.

2012-12-01

The availability of soil nutrients and heavy metals in urban community gardens can influence health of crops and participants. Interactions between garden history, management, and soils are understudied in cities. In July 2011, we collected soil samples from 45 plots at 6 Los Angeles community gardens. For comparison, 3 samples were collected from uncultivated garden soils and 3 more from outside soils. Samples were then tested for major nutrients- Nitrogen(N), Potassium (K), and Phosphorous (P)- and organic matter (SOM). We also measured concentrations of 29 metals in 3 gardens using Inductively Coupled Plasma- Atomic Emission Spectroscopy. Potassium and phosphorus exceeded optimum levels in all plots, with some over twice the maximum recommended levels. Over-fertilized soils may contribute to local watershed pollution and crop micronutrient deficiencies. Low soil SOM was observed in gardens in impoverished neighborhoods, possibly due to low quality amendments. Our metals analysis showed dangerous levels of lead (Pb)-- up to 1700 ppm in outside soils and 150 ppm in garden soils-- near older gardens, indicating lead deposition legacies. California lead safety standards indicate that children should not play near soils with Pb above 200 ppm, indicating need for long term monitoring of lead contaminated gardens. Arsenic (As) levels exceeded federal risk levels (0.3 ppm) and average CA background levels (2 ppm) in all areas, with some gardens exceeding 10 ppm. Heavy metal legacies in gardens may pose risks to participants with prolonged exposure and remediation of soils may be necessary.

An experimental assessment of vehicle disturbance effects on migratory shorebirds

USGS Publications Warehouse

Tarr, Nathan M.; Simons, T.R.; Pollock, K.H.

2010-01-01

Off-road vehicle (ORV) traffic is one of several forms of disturbance thought to affect shorebirds at migration stopover sites. Attempts to measure disturbance effects on shorebird habitat use and behavior at stopover sites are difficult because ORV disturbance is frequently confounded with habitat and environmental factors. We used a before-after-control-impact experimental design to isolate effects of vehicle disturbance from shorebird responses to environmental and habitat factors. We manipulated disturbance levels within beach closures along South Core Banks, North Carolina, USA, and measured changes in shorebird abundance and location, as well as the activity of one focal species, the sanderling (Calidris alba), within paired control and impact plots. We applied a discrete treatment level of one flee-response-inducing event every 10 minutes on impact plots. We found that disturbance reduced total shorebird and black-bellied plover (Pluvialis squatarola) abundance and reduced relative use of microhabitat zones above the swash zone (wet sand and dry sand) by sanderlings, black-bellied plovers, willets (Tringa semipalmata), and total shorebirds. Sanderlings and total shorebirds increased use of the swash zone in response to vehicle disturbance. Disturbance reduced use of study plots by sanderlings for resting and increased sanderling activity, but we did not detect an effect of vehicle disturbance on sanderling foraging activity. We provide the first estimates of how a discrete level of disturbance affects shorebird distributions among ocean beach microhabitats. Our findings provide a standard to which managers can compare frequency and intensity of disturbance events at other shorebird stopover and roosting sites and indicate that limiting disturbance will contribute to use of a site by migratory shorebirds. ?? 2010 The Wildlife Society.

Specialist and generalist symbionts show counterintuitive levels of genetic diversity and discordant demographic histories along the Florida Reef Tract

NASA Astrophysics Data System (ADS)

Titus, Benjamin M.; Daly, Marymegan

2017-03-01

Specialist and generalist life histories are expected to result in contrasting levels of genetic diversity at the population level, and symbioses are expected to lead to patterns that reflect a shared biogeographic history and co-diversification. We test these assumptions using mtDNA sequencing and a comparative phylogeographic approach for six co-occurring crustacean species that are symbiotic with sea anemones on western Atlantic coral reefs, yet vary in their host specificities: four are host specialists and two are host generalists. We first conducted species discovery analyses to delimit cryptic lineages, followed by classic population genetic diversity analyses for each delimited taxon, and then reconstructed the demographic history for each taxon using traditional summary statistics, Bayesian skyline plots, and approximate Bayesian computation to test for signatures of recent and concerted population expansion. The genetic diversity values recovered here contravene the expectations of the specialist-generalist variation hypothesis and classic population genetics theory; all specialist lineages had greater genetic diversity than generalists. Demography suggests recent population expansions in all taxa, although Bayesian skyline plots and approximate Bayesian computation suggest the timing and magnitude of these events were idiosyncratic. These results do not meet the a priori expectation of concordance among symbiotic taxa and suggest that intrinsic aspects of species biology may contribute more to phylogeographic history than extrinsic forces that shape whole communities. The recovery of two cryptic specialist lineages adds an additional layer of biodiversity to this symbiosis and contributes to an emerging pattern of cryptic speciation in the specialist taxa. Our results underscore the differences in the evolutionary processes acting on marine systems from the terrestrial processes that often drive theory. Finally, we continue to highlight the Florida Reef Tract as an important biodiversity hotspot.

Application of Box-Behnken design to prepare gentamicin-loaded calcium carbonate nanoparticles.

PubMed

Maleki Dizaj, Solmaz; Lotfipour, Farzaneh; Barzegar-Jalali, Mohammad; Zarrintan, Mohammad-Hossein; Adibkia, Khosro

2016-09-01

The aim of this research was to prepare and optimize calcium carbonate (CaCO3) nanoparticles as carriers for gentamicin sulfate. A chemical precipitation method was used to prepare the gentamicin sulfate-loaded CaCO3 nanoparticles. A 3-factor, 3-level Box-Behnken design was used for the optimization procedure, with the molar ratio of CaCl2: Na2CO3 (X1), the concentration of drug (X2), and the speed of homogenization (X3) as the independent variables. The particle size and entrapment efficiency were considered as response variables. Mathematical equations and response surface plots were used, along with the counter plots, to relate the dependent and independent variables. The results indicated that the speed of homogenization was the main variable contributing to particle size and entrapment efficiency. The combined effect of all three independent variables was also evaluated. Using the response optimization design, the optimized Xl-X3 levels were predicted. An optimized formulation was then prepared according to these levels, resulting in a particle size of 80.23 nm and an entrapment efficiency of 30.80%. It was concluded that the chemical precipitation technique, together with the Box-Behnken experimental design methodology, could be successfully used to optimize the formulation of drug-incorporated calcium carbonate nanoparticles.

Approach of regionalisation c-stocks in forest soils on a national level

NASA Astrophysics Data System (ADS)

Wellbrock, Nicole; Höhle, Juliane; Dühnelt, Petra; Holzhausen, Marieanna

2010-05-01

Introduction In December 2006, the German government decided to manage forests as carbon sinks to reduce greenhouse gas emissions in accordance with Article 3.4 of the Kyoto Protocol. The National Forest Monitoring data contribute to the fulfilment of these reporting commitments. In Germany, National Forest Monitoring includes the systematical extensive National Soil Condition Survey (BZE) and the detailed case studies (Level-II) which determine the processes within forests. This complex monitoring system is appropriate to Germany's greenhouse gas reporting (THG 2008 to 2012). The representative BZE plots can be used to obtain regional data for the National Carbon Stock Inventory. Here, an approach adopting a combination of geostatistics and regression analysis is preferred. The difficulty of showing the statistical significance of expected small changes while carbon stocks are generally high is one of the major challenges in carbon stock monitoring. However, through intensive preparation and cooperation with the forestry authorities of each federal state, the errors uncured in determining changes in carbon stocks in forest soils, which must be stipulated in greenhouse gas monitoring, could be minimised. In contrast to the detailed soil case studies, in which essentially the sources of error occur repeatedly in carbon stock change calculations, the BZE data can be stratified to form plots with homogenous properties, thereby reducing the standard error of estimate. Subsequently, the results of the stratification are projected across Germany, the reporting unit for greenhouse gas monitoring. National Forest Monitoring The BZE represents a national, systematic sampling inventory of the condition of forest soils. The first BZE inventory (BZE I: 1987 to 1993) was carried out on a systematic 8 x 8 km grid on the same sampling plots adopted in the Forest Condition Survey (WZE). In some areas the network of sampling plots involves 1900 grid points. The first BZE I survey was repeated after 15 years, between 2006 and 2008, by the national and the state authorities in cooperation. Afterwards, extensive laboratory and statistical analyses were conducted. Necessary parameters are listed in table 1. Upscaling approach There are different approaches for presenting extensive carbon stock data (Baritz et al., 2006). The availability of georeference plots means one can merge the point data with map data. In Germany, an approach was tested that used homogenous soil areas und plot-information from the national soil inventory. For every soil area c-stocks were regionalised. Only information form BZE-plots were involved which were characteristic for the soil area. The indicators were soil type and substrate class. For every soil area the forest areas were taken in account to calculate c-stock per forest area. The sum of every c-stock per soil area is the c-stock in forest soils of Germany. Tab.1: List of parameters for the carbon inventory (BZE II) Components Parameters Point level Field sampling Width of depth classes, Fine roots, humus (< 2 cm), dry bulk density, stone content, area of humus layer sampled, height a.s.l., litterfall, deadwood (from 10 cm) Analysis C content, fine soil fraction, weight of humus layer, Carbon stock calculations Carbon stock Regional Level Plot Soil type, parent material, vegetation type or forest Regionalisation Soil and land use maps, statistical models, ecological regions, digital elevation models, climate regions

Recurrence plot statistics and the effect of embedding

NASA Astrophysics Data System (ADS)

March, T. K.; Chapman, S. C.; Dendy, R. O.

2005-01-01

Recurrence plots provide a graphical representation of the recurrent patterns in a timeseries, the quantification of which is a relatively new field. Here we derive analytical expressions which relate the values of key statistics, notably determinism and entropy of line length distribution, to the correlation sum as a function of embedding dimension. These expressions are obtained by deriving the transformation which generates an embedded recurrence plot from an unembedded plot. A single unembedded recurrence plot thus provides the statistics of all possible embedded recurrence plots. If the correlation sum scales exponentially with embedding dimension, we show that these statistics are determined entirely by the exponent of the exponential. This explains the results of Iwanski and Bradley [J.S. Iwanski, E. Bradley, Recurrence plots of experimental data: to embed or not to embed? Chaos 8 (1998) 861-871] who found that certain recurrence plot statistics are apparently invariant to embedding dimension for certain low-dimensional systems. We also examine the relationship between the mutual information content of two timeseries and the common recurrent structure seen in their recurrence plots. This allows time-localized contributions to mutual information to be visualized. This technique is demonstrated using geomagnetic index data; we show that the AU and AL geomagnetic indices share half their information, and find the timescale on which mutual features appear.

Novel Functionalized Carbon Nanotube Supercapacitor Materials: Contribution to the Supercapacitor TIF

DTIC Science & Technology

2014-08-01

Novel functionalized carbon nanotube supercapacitor materials Contribution to the supercapacitor TIF Trisha Huber...Novel functionalized carbon nanotube supercapacitor materials Contribution to the supercapacitor TIF Trisha Huber...presented as a log-log plot. As illustrated, supercapacitors offer performance intermediate between batteries and capacitors in that they exhibit higher

A system-level cost-of-energy wind farm layout optimization with landowner modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chen, Le; MacDonald, Erin

This work applies an enhanced levelized wind farm cost model, including landowner remittance fees, to determine optimal turbine placements under three landowner participation scenarios and two land-plot shapes. Instead of assuming a continuous piece of land is available for the wind farm construction, as in most layout optimizations, the problem formulation represents landowner participation scenarios as a binary string variable, along with the number of turbines. The cost parameters and model are a combination of models from the National Renewable Energy Laboratory (NREL), Lawrence Berkeley National Laboratory, and Windustiy. The system-level cost-of-energy (COE) optimization model is also tested under twomore » land-plot shapes: equally-sized square land plots and unequal rectangle land plots. The optimal COEs results are compared to actual COE data and found to be realistic. The results show that landowner remittances account for approximately 10% of farm operating costs across all cases. Irregular land-plot shapes are easily handled by the model. We find that larger land plots do not necessarily receive higher remittance fees. The model can help site developers identify the most crucial land plots for project success and the optimal positions of turbines, with realistic estimates of costs and profitability. (C) 2013 Elsevier Ltd. All rights reserved.« less

The physico-chemical basis for the freeze-drying process.

PubMed

MacKenzie, A P

1976-10-01

To the extent that the final form and quality of a freeze-dried product depends on the way the freeze-drying is conducted, an understanding of the many factors involved is most important. The numerous effects of the design and mode of operation of the freeze-drying equipment on the course of the process need to be known, as do the properties intrinsic to the material to be freeze-dried. Much can be learned and predicted from the study of the "supplemented phase diagram", a series of experimental plots describing the equilibrium and the non-equilibrium phase behavior of the system in question. Such diagrams map and distinguish eutectic and amorphous phase behavior. Further information is available from gravimetric studies allowing the construction of "desorption isotherms", the plots describing the loss of sorbed water accompanying the sublimation of ice, frequently termed "secondary drying". These plots relate the water retained by the product to the "water activity", or relative humidity at different temperatures. Observations in the freeze-drying microscope contribute additional information, in that they reveal the actual course of the process at the microscopic level. These and other laboratory findings facilitate the analysis and comparison of pilot-plant and commercical scale processing experiences. Where scientific and engineering factors appear to interrelate, the nature and extent of the interdependence can often be determined.

Set-up and calibration of an outdoor nozzle-type rainfall simulator for soil erosion studies at the Masse experimental station (central Italy)

NASA Astrophysics Data System (ADS)

Vergni, Lorenzo; Todisco, Francesca

2016-04-01

This contribution describes the technical characteristics and the preliminary calibration of a rainfall simulator recently installed by the Department of Agricultural, Food and Environmental Sciences (Perugia University) at the Masse experimental station located 20 km south of Perugia, in the region of Umbria (central Italy). The site includes some USLE plots of different length λ = 11 and 22 m and width w = 2, 4 and 8 m, oriented parallel to a 16 % slope and kept free of vegetation by frequent ploughing. Since 2008, the station enabled to collect data from more than 80 erosive events, that were mainly used to investigate the relationship between rainfall characteristics and soil loss. The relevant soil loss variability that characterizes erosive storm events with similar overall characteristics (duration and/or depth) can be explained by the different rainfall profile of erosive storms and by the different antecedent soil aggregate stability. To analyse in more detail these aspects, recently, the Masse experimental station has been equipped with a semi-portable rainfall simulator placed over two micro-plots of 1x1 m each, having the same topographic and pedologic conditions of the adjacent USLE plots. The rainfall simulator consists of four full-cone spray nozzles for each micro-plot, placed at the angles of a 0.18-m square, centred over the plot at a height of 2.7 m above the ground. The operating pressure is regulated by pressure regulating valves and checked by pressure gauges mounted in correspondence of each nozzle. An electronic control unit regulates the start and stop of the inlet solenoid valves. A range of rainfall intensities can be achieved, by activating different combinations of nozzles (15 different intensities) also during the same simulation trial. The particular design of the plots allows to collect separately the runoff volume deriving from the plots and the water volume fallen outside of the plot. In this way it is possible to derive, by difference, the actual infiltration volume. The experiments are carried out simultaneously on the two adjacent micro-plots. In particular, this contribution reports the results of the first experimental trials aimed to assess the uniformity attainable by single nozzles and its reproducibility (between plots and in time). The interferences between adjacent nozzles (when they work simultaneously) were also evaluated.

Hydrogeochemical characterization and Natural Background Levels in urbanized areas: Milan Metropolitan area (Northern Italy)

NASA Astrophysics Data System (ADS)

De Caro, Mattia; Crosta, Giovanni B.; Frattini, Paolo

2017-04-01

Although aquifers in densely populated and industrialized areas are extremely valuable and sensitive to contamination, an estimate of the groundwater quality status relative to baseline conditions is lacking for many of them. This paper provides a hydrogeochemical characterization of the groundwater in the Milan metropolitan area, one of the most densely populated areas in Europe. First, a conceptual model of the study area based on the analysis of the spatial distribution of natural chemical species and indicator contaminants is presented. The hydrochemical facies of the study area depend on the lithology of catchments drained by the main contributing rivers and on the aquifer settings. The anthropogenic influence on the groundwater quality of superficial aquifers is studied by means of probability plots, concentration versus depth plots and spatial-temporal plots for nitrate, sulfate and chloride. These allow differentiation of contaminated superficial aquifers from deep confined aquifers with baseline water quality. Natural Background Levels (NBL) of selected species (Cl, Na, NH4, SO4, NO3, As, Fe, Mn and Zn) are estimated by means of the pre-selection (PS) and the component separation (CS) statistical approaches. The NBLs depend on hydrogeological settings of the study area; sodium, chloride, sulfate and zinc NBL values never exceed the environmental water quality standards. NBL values of ammonium, iron, arsenic and manganese exceed the environmental water quality standards in the anaerobic portion of the aquifers. On the basis of observations, a set of criteria and precautions are suggested for adoption with both PS and CS methods in the aquifer characterization of highly urbanized areas.

Sampling Error in Relation to Cyst Nematode Population Density Estimation in Small Field Plots.

PubMed

Župunski, Vesna; Jevtić, Radivoje; Jokić, Vesna Spasić; Župunski, Ljubica; Lalošević, Mirjana; Ćirić, Mihajlo; Ćurčić, Živko

2017-06-01

Cyst nematodes are serious plant-parasitic pests which could cause severe yield losses and extensive damage. Since there is still very little information about error of population density estimation in small field plots, this study contributes to the broad issue of population density assessment. It was shown that there was no significant difference between cyst counts of five or seven bulk samples taken per each 1-m 2 plot, if average cyst count per examined plot exceeds 75 cysts per 100 g of soil. Goodness of fit of data to probability distribution tested with χ 2 test confirmed a negative binomial distribution of cyst counts for 21 out of 23 plots. The recommended measure of sampling precision of 17% expressed through coefficient of variation ( cv ) was achieved if the plots of 1 m 2 contaminated with more than 90 cysts per 100 g of soil were sampled with 10-core bulk samples taken in five repetitions. If plots were contaminated with less than 75 cysts per 100 g of soil, 10-core bulk samples taken in seven repetitions gave cv higher than 23%. This study indicates that more attention should be paid on estimation of sampling error in experimental field plots to ensure more reliable estimation of population density of cyst nematodes.

Understanding Chemical Equilibrium: The Role of Gas Phases and Mixing Contributions in the Minimum of Free Energy Plots

ERIC Educational Resources Information Center

Tomba, J. Pablo

2017-01-01

The use of free energy plots to understand the concept of thermodynamic equilibrium has been shown to be of great pedagogical value in materials science. Although chemical equilibrium is also amenable to this kind of analysis, it is not part of the agenda of materials science textbooks. Something similar is found in chemistry branches, where free…

Disturbance, tree mortality, and implications for contemporary regional forest change in the Pacific Northwest

Treesearch

Matthew J. Reilly; Thomas A. Spies

2016-01-01

Tree mortality is an important demographic process and primary driver of forest dynamics, yet there are relatively few plot-based studies that explicitly quantify mortality and compare the relative contribution of endogenous and exogenous disturbances at regional scales. We used repeated observations on 289,390 trees in 3673 1 ha plots on U.S. Forest Service lands in...

WebPlotDigitizer, a polyvalent and free software to extract spectra from old astronomical publications: application to ultraviolet spectropolarimetry

NASA Astrophysics Data System (ADS)

Marin, F.; Rohatgi, A.; Charlot, S.

2017-12-01

In this contribution, we present WebPlotDigitizer, a polyvalent and free software developed to facilitate easy and accurate data extraction from a variety of plot types. We describe the numerous features of this numerical tool and present its relevance when applied to astrophysical archival research. We exploit WebPlotDigitizer to extract ultraviolet spectropolarimetric spectra from old publications that used the Hubble Space Telescope, Lick Observatory 3 m Shane telescope and Astro-2 mission to observe the Seyfert-2 AGN NGC 1068. By doing so, we compile all the existing ultraviolet polarimetric data on NGC 1068 to prepare the ground for further investigations with the future high-resolution spectropolarimeter POLLUX on-board of the proposed Large UV/Optical/Infrared Surveyor (LUVOIR) NASA mission.

Fungicides transport in runoff from vineyard plot and catchment: contribution of non-target areas.

PubMed

Lefrancq, Marie; Payraudeau, Sylvain; García Verdú, Antonio Joaquín; Maillard, Elodie; Millet, Maurice; Imfeld, Gwenaël

2014-04-01

Surface runoff and erosion during the course of rainfall events are major processes of pesticides transport from agricultural land to aquatic ecosystem. These processes are generally evaluated either at the plot or the catchment scale. Here, we compared at both scales the transport and partitioning in runoff water of two widely used fungicides, i.e., kresoxim-methyl (KM) and cyazofamid (CY). The objective was to evaluate the relationship between fungicides runoff from the plot and from the vineyard catchment. The results show that seasonal exports for KM and CY at the catchment were larger than those obtained at the plot. This underlines that non-target areas within the catchment largely contribute to the overall load of runoff-associated fungicides. Estimations show that 85 and 62 % of the loads observed for KM and CY at the catchment outlet cannot be explained by the vineyard plots. However, the partitioning of KM and CY between three fractions, i.e., the suspended solids (>0.7 μm) and two dissolved fractions (i.e., between 0.22 and 0.7 µm and <0.22 µm) in runoff water was similar at both scales. KM was predominantly detected below 0.22 μm, whereas CY was mainly detected in the fraction between 0.22 and 0.7 μm. Although KM and CY have similar physicochemical properties and are expected to behave similarly, our results show that their partitioning between two fractions of the dissolved phase differs largely. It is concluded that combined observations of pesticide runoff at both the catchment and the plot scales enable to evaluate the sources areas of pesticide off-site transport.

Artificial intelligence analysis of hyperspectral remote sensing data for management of water, weed, and nitrogen stresses in corn fields

NASA Astrophysics Data System (ADS)

Waheed, Tahir

This study investigated the possibility of using ground-based remotely sensed hyperspectral observations with a special emphasis on detection of water, weed and nitrogen stresses contributing towards in-season decision support for precision crop management (PCM). A three factor split-split-plot experiment, with four randomized blocks as replicates, was established during the growing seasons of 2003 and 2004. Corn (Zea mays L.) hybrid DKC42-22 was grown because this hybrid is a good performer on light soils in Quebec. There were twelve 12 x 12m plots in a block (one replication per treatment per block) and the total number of plots was 48. Water stress was the main factor in the experiment. A drip irrigation system was laid out and each block was split into irrigated and non-irrigated halves. The second main factor of the experiment was weeds with two levels i.e. full weed control and no weed control. Weed treatments were assigned randomly by further splitting the irrigated and non-irrigated sub-blocks into two halves. Each of the weed treatments was furthermore split into three equal sub-sub-plots for nitrogen treatments (third factor of the experiment). Nitrogen was applied at three levels i.e. 50, 150 and 250 kg N ha-1 (Quebec norm is between 120-160 kg N ha-1). The hyperspectral data were recorded (spectral resolution = 1 nm) mid-day (between 1000 and 1400 hours) with a FieldSpec FR spectroradiometer over a spectral range of 400-2500 run at three growth stages namely: early growth, tasseling and full maturity, in each of the growing season. There are two major original contributions in this thesis: First is the development of a hyperspectral data analysis procedure for separating visible (400-700 nm), near-infrared (700-1300 nm) and mid-infrared (1300-2500 nm) regions of the spectrum for use in discriminant analysis procedure. In addition, of all the spectral band-widths analyzed, seven waveband-aggregates were identified using STEPDISC procedure, which were the most effective for classifying combined water, weed, and nitrogen stress. The second contribution is the successful classification of hyperspectral observations acquired over an agricultural field, using three innovative artificial intelligence approaches; support vector machines (SVM), genetic algorithms (GA) and decision tree (DT) algorithms. These AI approaches were used to evaluate a combined effect of water, weed and nitrogen stresses in corn and of all the three AI approaches used, SVM produced the best results (overall accuracy ranging from 88% to 100%). The general conclusion is that the conventional statistical and artificial intelligence techniques used in this study are all useful for quickly mapping combined affects of irrigation, weed and nitrogen stresses (with overall accuracies ranging from 76% to 100%). These approaches have strong potential and are of great benefit to those investigating the in-season impact of irrigation, weed and nitrogen management for corn crop production and other environment related challenges.

Alternate row placement is ineffective for cultural control of Meloidogyne incognita in cotton

PubMed Central

2008-01-01

The objective of this study was to determine if planting cotton into the space between the previous year's rows reduces crop loss due to Meloidogyne incognita compared to planting in the same row every year. Row placement had a significant (P ≤ 0.05) effect on nematode population levels only on 8 July 2005. Plots receiving 1,3-dichloropropene plus aldicarb had lower nematode population levels than non-fumigated plots on 24 May and 8 July in 2005, but not in 2004. The effect of nematicide treatment on nematode populations was not affected by row placement. Row placement did not have a significant effect on root galling or yield in 2004 or 2005. Nematicide treatment decreased root galling in all years, and the decrease was not influenced by row placement. Yield was increased by nematicide application in 2004 and 2005, and the increase was not affected by row placement. Percentage yield loss was not affected by row placement. Changing the placement of rows reduced nematode population levels only on one sampling date in one year, but end-of-season root galling and lint yield were not affected by changing the placement of rows, nor was the effect of fumigation on yield influenced by row placement. Therefore, row placement is unlikely to contribute to M. incognita management in cotton. PMID:19440259

Allan Deviation Plot as a Tool for Quartz-Enhanced Photoacoustic Sensors Noise Analysis.

PubMed

Giglio, Marilena; Patimisco, Pietro; Sampaolo, Angelo; Scamarcio, Gaetano; Tittel, Frank K; Spagnolo, Vincenzo

2016-04-01

We report here on the use of the Allan deviation plot to analyze the long-term stability of a quartz-enhanced photoacoustic (QEPAS) gas sensor. The Allan plot provides information about the optimum averaging time for the QEPAS signal and allows the prediction of its ultimate detection limit. The Allan deviation can also be used to determine the main sources of noise coming from the individual components of the sensor. Quartz tuning fork thermal noise dominates for integration times up to 275 s, whereas at longer averaging times, the main contribution to the sensor noise originates from laser power instabilities.

Universal properties of galactic rotation curves and a first principles derivation of the Tully-Fisher relation

NASA Astrophysics Data System (ADS)

O'Brien, James G.; Chiarelli, Thomas L.; Mannheim, Philip D.

2018-07-01

In a recent paper McGaugh, Lelli, and Schombert showed that in an empirical plot of the observed centripetal accelerations in spiral galaxies against those predicted by the Newtonian gravity of the luminous matter in those galaxies the data points occupied a remarkably narrow band. While one could summarize the mean properties of the band by drawing a single mean curve through it, by fitting the band with the illustrative conformal gravity theory with fits that fill out the width of the band we show here that the width of the band is just as physically significant. We show that at very low luminous Newtonian accelerations the plot can become independent of the luminous Newtonian contribution altogether, but still be non-trivial due to the contribution of matter outside of the galaxies (viz. the rest of the visible universe). We present a new empirical plot of the difference between the observed centripetal accelerations and the luminous Newtonian expectations as a function of distance from the centers of galaxies, and show that at distances greater than 10 kpc the plot also occupies a remarkably narrow band, one even close to constant. Using the conformal gravity theory we provide a first principles derivation of the empirical Tully-Fisher relation.

Analysis of a Split-Plot Experimental Design Applied to a Low-Speed Wind Tunnel Investigation

NASA Technical Reports Server (NTRS)

Erickson, Gary E.

2013-01-01

A procedure to analyze a split-plot experimental design featuring two input factors, two levels of randomization, and two error structures in a low-speed wind tunnel investigation of a small-scale model of a fighter airplane configuration is described in this report. Standard commercially-available statistical software was used to analyze the test results obtained in a randomization-restricted environment often encountered in wind tunnel testing. The input factors were differential horizontal stabilizer incidence and the angle of attack. The response variables were the aerodynamic coefficients of lift, drag, and pitching moment. Using split-plot terminology, the whole plot, or difficult-to-change, factor was the differential horizontal stabilizer incidence, and the subplot, or easy-to-change, factor was the angle of attack. The whole plot and subplot factors were both tested at three levels. Degrees of freedom for the whole plot error were provided by replication in the form of three blocks, or replicates, which were intended to simulate three consecutive days of wind tunnel facility operation. The analysis was conducted in three stages, which yielded the estimated mean squares, multiple regression function coefficients, and corresponding tests of significance for all individual terms at the whole plot and subplot levels for the three aerodynamic response variables. The estimated regression functions included main effects and two-factor interaction for the lift coefficient, main effects, two-factor interaction, and quadratic effects for the drag coefficient, and only main effects for the pitching moment coefficient.

Multi-scale habitat selection in highly territorial bird species: Exploring the contribution of nest, territory and landscape levels to site choice in breeding rallids (Aves: Rallidae)

NASA Astrophysics Data System (ADS)

Jedlikowski, Jan; Chibowski, Piotr; Karasek, Tomasz; Brambilla, Mattia

2016-05-01

Habitat selection often involves choices made at different spatial scales, but the underlying mechanisms are still poorly understood, and studies that investigate the relative importance of individual scales are rare. We investigated the effect of three spatial scales (landscape, territory, nest-site) on the occurrence pattern of little crake Zapornia parva and water rail Rallus aquaticus at 74 ponds in the Masurian Lakeland, Poland. Habitat structure, food abundance and water chemical parameters were measured at nests and random points within landscape plots (from 300-m to 50-m radius), territory (14-m) and nest-site plots (3-m). Regression analyses suggested that the most relevant scale was territory level, followed by landscape, and finally by nest-site for both species. Variation partitioning confirmed this pattern for water rail, but also highlighted the importance of nest-site (the level explaining the highest share of unique variation) for little crake. The most important variables determining the occurrence of both species were water body fragmentation (landscape), vegetation density (territory) and water depth (at territory level for little crake, and at nest-site level for water rail). Finally, for both species multi-scale models including factors from different levels were more parsimonious than single-scale ones, i.e. habitat selection was likely a multi-scale process. The importance of particular spatial scales seemed more related to life-history traits than to the extent of the scales considered. In the case of our study species, the territory level was highly important likely because both rallids have to obtain all the resources they need (nest site, food and mates) in relatively small areas, the multi-purpose territories they defend.

Responses Of Alpine Vegetation To Global Warming: Insights From Comparing Alpine-Restricted And Broad-Ranging Herbs Along Snowmelt Gradients

NASA Astrophysics Data System (ADS)

Butz, R. J.; Reinhardt, K. S.; Germino, M. J.; Kueppers, L. M.

2009-12-01

Many alpine plant species face habitat fragmentation and loss, and even extinction because their narrow elevation, precipitation, and temperature tolerances limit their geographic distribution. In order to assess the impacts of climate change on sensitive native alpine communities we used a variety of methods to look at the seasonal timing of life stages (phenology) and the stress responses (physiology) of alpine species along a natural environmental gradient at Niwot Ridge in the Colorado Rocky Mountains to address the following question: Will alpine plants be impaired in their existing range as a result of climate change? We collected data on date of snowmelt and vegetative and flowering phenology of all alpine species present from snowmelt to senescence in 80 1m2 plots above treeline. In addition, we measured soil temperature and moisture, plant water potential and leaf-level gas exchange early, mid, and late-season on three alpine-restricted and three broader-ranging alpine species: Geum rossii, Artemisia scopulorum, Carex rupestris, Lewisia pygmaea, Tetraneuris grandiflora, and Sibbaldia procumbens. In 2009, the natural variation in snowmelt timing was 40 days (approximately 5.5 weeks) over the 80 plots. Our results suggest that with earlier snowmelt, the number of vascular species per plot increases. However, this increase is almost exclusively attributable to wider ranging species not restricted to the alpine. Plots with intermediate natural snowmelt dates had a higher diversity of alpine-restricted species, photosynthesis, and water-use efficiency, thereby potentially increasing long-term survival rates amongst alpine species. Water stress increased in all species as the season progressed, especially in plots where snow melted earliest. Photosynthetic productivity and diversity of alpine-restricted species was greatest in plots having intermediate melt dates. These findings suggest that shifts in snowmelt date under a warming climate will likely impact the diversity and productivity of alpine vegetation. Furthermore, results from this ongoing work will contribute to a predictive understanding of shifts in the distributions of subalpine and alpine species with climate warming in the Rocky Mountains and Western U.S.

Plots, pixels, and partnerships: prospects for mapping, monitoring and modeling biodiversity.

Treesearch

H. Gyde Lund; Victor A. Rudis; Kenneth W. Stolte

1998-01-01

Many biodiversity inventories are conducted in relatively small areas, yet information is needed at the national, regional, and global levels.Most nations have forest inventory plot networks.While forest inventories may not contain the detailed species information that biodiversity inventories do, the forest inventory plot networks do represent large areas.Linkages...

Do Plot Studies Generate “Directionally” Correct Assessments of Field Level Phosphorus Losses?

USDA-ARS?s Scientific Manuscript database

The National P Research Project (NPRP) coordinated a tremendous amount of research at the plot scale to assess the influence of nutrient management on P transport at the fields scale. The objectives of this research were to determine of plot scale rainfall simulations could be used to assess P trans...

Earthworm effects on the incorporation of litter C and N into soil organic matter in a sugar maple forest.

PubMed

Fahey, Timothy J; Yavitt, Joseph B; Sherman, Ruth E; Maerz, John C; Groffman, Peter M; Fisk, Melany C; Bohlen, Patrick J

2013-07-01

To examine the mechanisms of earthworm effects on forest soil C and N, we double-labeled leaf litter with 13C and 15N, applied it to sugar maple forest plots with and without earthworms, and traced isotopes into soil pools. The experimental design included forest plots with different earthworm community composition (dominated by Lumbricus terrestris or L. rubellus). Soil carbon pools were 37% lower in earthworm-invaded plots largely because of the elimination of the forest floor horizons, and mineral soil C:N was lower in earthworm plots despite the mixing of high C:N organic matter into soil by earthworms. Litter disappearance over the first winter-spring was highest in the L. terrestris (T) plots, but during the warm season, rapid loss of litter was observed in both L. rubellus (R) and T plots. After two years, 22.0% +/- 5.4% of 13C released from litter was recovered in soil with no significant differences among plots. Total recovery of added 13C (decaying litter plus soil) was much higher in no-worm (NW) plots (61-68%) than in R and T plots (20-29%) as much of the litter remained in the former whereas it had disappeared in the latter. Much higher percentage recovery of 15N than 13C was observed, with significantly lower values for T than R and NW plots. Higher overwinter earthworm activity in T plots contributed to lower soil N recovery. In earthworm-invaded plots isotope enrichment was highest in macroaggregates and microaggregates whereas in NW plots silt plus clay fractions were most enriched. The net effect of litter mixing and priming of recalcitrant soil organic matter (SOM), stabilization of SOM in soil aggregates, and alteration of the soil microbial community by earthworm activity results in loss of SOM and lowering of the C:N ratio. We suggest that earthworm stoichiometry plays a fundamental role in regulating C and N dynamics of forest SOM.

Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity

DOE PAGES

Liang, Yuting; Wu, Liyou; Clark, Ian M.; ...

2015-04-07

Spatial scaling is a critical issue in ecology, but how anthropogenic activities like fertilization affect spatial scaling is poorly understood, especially for microbial communities. Here, we determined the effects of long-term fertilization on the spatial scaling of microbial functional diversity and its relationships to plant diversity in the 150-year-old Park Grass Experiment, the oldest continuous grassland experiment in the world. Nested samples were taken from plots with contrasting inorganic fertilization regimes, and community DNAs were analyzed using the GeoChip-based functional gene array. The slopes of microbial gene-area relationships (GARs) and plant species-area relationships (SARs) were estimated in a plot receivingmore » nitrogen (N), phosphorus (P), and potassium (K) and a control plot without fertilization. Our results indicated that long-term inorganic fertilization significantly increased both microbial GARs and plant SARs. Microbial spatial turnover rates (i.e., z values) were less than 0.1 and were significantly higher in the fertilized plot (0.0583) than in the control plot (0.0449) (P < 0.0001). The z values also varied significantly with different functional genes involved in carbon (C), N, P, and sulfur (S) cycling and with various phylogenetic groups (archaea, bacteria, and fungi). Similarly, the plant SARs increased significantly (P < 0.0001), from 0.225 in the control plot to 0.419 in the fertilized plot. Soil fertilization, plant diversity, and spatial distance had roughly equal contributions in shaping the microbial functional community structure, while soil geochemical variables contributed less. These results indicated that long-term agricultural practice could alter the spatial scaling of microbial biodiversity. Determining the spatial scaling of microbial biodiversity and its response to human activities is important but challenging in microbial ecology. Most studies to date are based on different sites that may not be truly comparable or on short-term perturbations, and hence, the results observed could represent transient responses. This study examined the spatial patterns of microbial communities in response to different fertilization regimes at the Rothamsted Research Experimental Station, which has become an invaluable resource for ecologists, environmentalists, and soil scientists. The current study is the first showing that long-term fertilization has dramatic impacts on the spatial scaling of microbial communities. By identifying the spatial patterns in response to long-term fertilization and their underlying mechanisms, this study makes fundamental contributions to predictive understanding of microbial biogeography.« less

Over 150 years of long-term fertilization alters spatial scaling of microbial biodiversity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liang, Yuting; Wu, Liyou; Clark, Ian M.

Spatial scaling is a critical issue in ecology, but how anthropogenic activities like fertilization affect spatial scaling is poorly understood, especially for microbial communities. Here, we determined the effects of long-term fertilization on the spatial scaling of microbial functional diversity and its relationships to plant diversity in the 150-year-old Park Grass Experiment, the oldest continuous grassland experiment in the world. Nested samples were taken from plots with contrasting inorganic fertilization regimes, and community DNAs were analyzed using the GeoChip-based functional gene array. The slopes of microbial gene-area relationships (GARs) and plant species-area relationships (SARs) were estimated in a plot receivingmore » nitrogen (N), phosphorus (P), and potassium (K) and a control plot without fertilization. Our results indicated that long-term inorganic fertilization significantly increased both microbial GARs and plant SARs. Microbial spatial turnover rates (i.e., z values) were less than 0.1 and were significantly higher in the fertilized plot (0.0583) than in the control plot (0.0449) (P < 0.0001). The z values also varied significantly with different functional genes involved in carbon (C), N, P, and sulfur (S) cycling and with various phylogenetic groups (archaea, bacteria, and fungi). Similarly, the plant SARs increased significantly (P < 0.0001), from 0.225 in the control plot to 0.419 in the fertilized plot. Soil fertilization, plant diversity, and spatial distance had roughly equal contributions in shaping the microbial functional community structure, while soil geochemical variables contributed less. These results indicated that long-term agricultural practice could alter the spatial scaling of microbial biodiversity. Determining the spatial scaling of microbial biodiversity and its response to human activities is important but challenging in microbial ecology. Most studies to date are based on different sites that may not be truly comparable or on short-term perturbations, and hence, the results observed could represent transient responses. This study examined the spatial patterns of microbial communities in response to different fertilization regimes at the Rothamsted Research Experimental Station, which has become an invaluable resource for ecologists, environmentalists, and soil scientists. The current study is the first showing that long-term fertilization has dramatic impacts on the spatial scaling of microbial communities. By identifying the spatial patterns in response to long-term fertilization and their underlying mechanisms, this study makes fundamental contributions to predictive understanding of microbial biogeography.« less

Impacts of Cover Crops on Water and Nutrient Dynamics in Agroecosystems

NASA Astrophysics Data System (ADS)

Williard, K.; Swanberg, S.; Schoonover, J.

2013-05-01

Intensive cropping systems of corn (Zea Mays L.) and soybeans (Glycine max) are commonly leaky systems with respect to nitrogen (N). Reactive N outputs from agroecosystems can contribute to eutrophication and hypoxic zones in downstream water bodies and greenhouse gas (N2O) emissions. Incorporating cover crops into temperate agroecosystem rotations has been promoted as a tool to increase nitrogen use efficiency and thus limit reactive N outputs to the environment. Our objective was determine how cereal rye (Secale cereal L.) and annual ryegrass (Lolium multiflorum) cover crops impact nutrient and soil water dynamics in an intensive corn and soybean cropping rotation in central Illinois. Cover crops were planted in mid to late October and terminated in early April prior to corn or soybean planting. In the spring just prior to cover crop termination, soil moisture levels were lower in the cover crop plots compared to no cover plots. This can be a concern for the subsequent crop in relatively dry years, which the Midwestern United States experienced in 2012. No cover plots had greater nutrient leaching below the rooting zone compared to cover crop areas, as expected. The cover crops were likely scavenging nutrients during the fall and early spring and should provide nutrients to the subsequent crop via decomposition and mineralization of the cover crop residue. Over the long term, cover crop systems should produce greater inputs and cycling of carbon and N, increasing the productivity of crops due to the long-term accumulation of soil organic matter. This study demonstrates that there may be short term trade-offs in reduced soil moisture levels that should be considered alongside the long term nutrient scavenging and recycling benefits of cover crops.

SplicePlot: a utility for visualizing splicing quantitative trait loci.

PubMed

Wu, Eric; Nance, Tracy; Montgomery, Stephen B

2014-04-01

RNA sequencing has provided unprecedented resolution of alternative splicing and splicing quantitative trait loci (sQTL). However, there are few tools available for visualizing the genotype-dependent effects of splicing at a population level. SplicePlot is a simple command line utility that produces intuitive visualization of sQTLs and their effects. SplicePlot takes mapped RNA sequencing reads in BAM format and genotype data in VCF format as input and outputs publication-quality Sashimi plots, hive plots and structure plots, enabling better investigation and understanding of the role of genetics on alternative splicing and transcript structure. Source code and detailed documentation are available at http://montgomerylab.stanford.edu/spliceplot/index.html under Resources and at Github. SplicePlot is implemented in Python and is supported on Linux and Mac OS. A VirtualBox virtual machine running Ubuntu with SplicePlot already installed is also available.

Seasonal and Inter-annual Phenological Varibility is Greatest in Low-Arctic and Wet Sites Across the North Slope of Alaska as Observed from Multiple Remote Sensing Platforms

NASA Astrophysics Data System (ADS)

Vargas, S. A., Jr.; Andresen, C. G.; May, J. L.; Oberbauer, S. F.; Hollister, R. D.; Tweedie, C. E.

2017-12-01

The Arctic is experiencing among the most dramatic impacts from climate variability on the planet. Arctic plant phenology has been identified as an ideal indicator of climate change impacts and provides great insight into seasonal and inter-annual vegetative trends and their responses to such changes. Traditionally, phenology has been quantified using satellite-based systems and plot-level observations but each approach presents limitations especially in high latitude regions. Mid-scale systems (e.g. automated sensor platforms and trams) have shown to provide alternative, and in most cases, cheaper solutions with comparable results to those acquired traditionally. This study contributes to the US Arctic Observing Network (AON) and assesses the effectiveness of using digital images acquired from pheno-cams, a kite aerial photography (KAP) system, and plot-level images (PLI) in their capacity to assess phenological variability (e.g. snow melt, greening and end-of-season) for dominant vegetation communities present at two sites in both Utqiagvik and Atqasuk, Alaska, namely the Mobile Instrumented Sensor Platform (MISP) and the Circum-arctic Active Layer Monitoring (CALM) grids. RGB indices (e.g. GEI and %G) acquired from these methods were compared to the normalized difference vegetation index (NDVI) calculated from multispectral ground-based reflectance measurements, which has been identified and used as a proxy of primary productivity across multiple ecosystems including the Arctic. The 5 years of growing season data collected generally resulted with stronger Pearson's correlations between indices located in plots containing higher soil moisture versus those that were drier. Future studies will extend platform inter-comparison to the satellite level by scaling trends to MODIS land surface products. Trends documented thus far, however, suggest that the long-term changes in satellite NDVI for these study areas, could be a direct response from wet tundra landscapes.

Dispersive analysis of ω→3 π and ϕ→3 π decays

NASA Astrophysics Data System (ADS)

Niecknig, Franz; Kubis, Bastian; Schneider, Sebastian P.

2012-05-01

We study the three-pion decays of the lightest isoscalar vector mesons, ω and ϕ, in a dispersive framework that allows for a consistent description of final-state interactions between all three pions. Our results are solely dependent on the phenomenological input for the pion-pion P-wave scattering phase shift. We predict the Dalitz plot distributions for both decays and compare our findings to recent measurements of the ϕ→3 π Dalitz plot by the KLOE and CMD-2 collaborations. Dalitz plot parameters for future precision measurements of ω→3 π are predicted. We also calculate the ππ P-wave inelasticity contribution from ωπ intermediate states.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zhang, Yuxuan; Bilheux, Jean -Christophe

ImagingReso is an open-source Python library that simulates the neutron resonance signal for neutron imaging measurements. By defining the sample information such as density, thickness in the neutron path, and isotopic ratios of the elemental composition of the material, this package plots the expected resonance peaks for a selected neutron energy range. Various sample types such as layers of single elements (Ag, Co, etc. in solid form), chemical compounds (UO 3, Gd 2O 3, etc.), or even multiple layers of both types can be plotted with this package. As a result, major plotting features include display of the transmission/attenuation inmore » wavelength, energy, and time scale, and show/hide elemental and isotopic contributions in the total resonance signal.« less

Mitigation options for methane emissions from rice fields in the Philippines

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lantin, R.S.; Buendia, L.V.; Wassmann, R.

1996-12-31

The contribution of Philippine rice production to global methane emission and breakthroughs in methane emission studies conducted in the country are presented in this paper. A significant impact in the reduction of GHG emissions from agriculture can be achieved if methane emissions from ricefields can be abated. This study presents the contribution of Philippine rice cultivation to global methane emission and breakthroughs in methane emission studies in the country which address the issue of mitigation. Using the derived emission factors from local measurements, rice cultivation contributes 566.6 Gg of methane emission in the Philippines. This value is 62% of themore » total methane emitted from the agriculture sector. The emission factors employed which are 78% of the IPCC value for irrigated rice and 95% for rainfed rice were derived from measurements with an automatic system taken during the growth duration in the respective ecosystems. Plots drained for 2 weeks at midtillering and before harvest gave a significant reduction in methane emission as opposed to continuously flooded plots and plots drained before harvest. The cultivar Magat reduced methane emission by 50% as compared to the check variety IR72. The application of ammonium sulfate instead of urea reduced methane emission by 10% to 34%. Addition of 6 t ha{sup {minus}1} phosphogypsum in combination with urea reduced emission by 74% as opposed to plots applied with urea alone. It is also from the results of such measurements that abatement strategies are based as regards to modifying treatments such as water management, fertilization, and choice of rice variety. It is not easy to identify and recommend mitigation strategies that will fit a particular cropping system. However, the identified mitigation options provide focus for the abatement of methane emission from ricefields.« less

Recovery based on plot experiments is a poor predictor of landscape-level population impacts of agricultural pesticides.

PubMed

Topping, Christopher John; Kjaer, Lene Jung; Hommen, Udo; Høye, Toke Thomas; Preuss, Thomas G; Sibly, Richard M; van Vliet, Peter

2014-07-01

Current European Union regulatory risk assessment allows application of pesticides provided that recovery of nontarget arthropods in-crop occurs within a year. Despite the long-established theory of source-sink dynamics, risk assessment ignores depletion of surrounding populations and typical field trials are restricted to plot-scale experiments. In the present study, the authors used agent-based modeling of 2 contrasting invertebrates, a spider and a beetle, to assess how the area of pesticide application and environmental half-life affect the assessment of recovery at the plot scale and impact the population at the landscape scale. Small-scale plot experiments were simulated for pesticides with different application rates and environmental half-lives. The same pesticides were then evaluated at the landscape scale (10 km × 10 km) assuming continuous year-on-year usage. The authors' results show that recovery time estimated from plot experiments is a poor indicator of long-term population impact at the landscape level and that the spatial scale of pesticide application strongly determines population-level impact. This raises serious doubts as to the utility of plot-recovery experiments in pesticide regulatory risk assessment for population-level protection. Predictions from the model are supported by empirical evidence from a series of studies carried out in the decade starting in 1988. The issues raised then can now be addressed using simulation. Prediction of impacts at landscape scales should be more widely used in assessing the risks posed by environmental stressors. © 2014 SETAC.

Mixtures of genetically modified wheat lines outperform monocultures.

PubMed

Zeller, Simon L; Kalinina, Olena; Flynn, Dan F B; Schmid, Bernhard

2012-09-01

Biodiversity research shows that diverse plant communities are more stable and productive than monocultures. Similarly, populations in which genotypes with different pathogen resistance are mixed may have lower pathogen levels and thus higher productivity than genetically uniform populations. We used genetically modified (GM) wheat as a model system to test this prediction, because it allowed us to use genotypes that differed only in the trait pathogen resistance but were otherwise identical. We grew three such genotypes or lines in monocultures or two-line mixtures. Phenotypic measurements were taken at the level of individual plants and of entire plots (population level). We found that resistance to mildew increased with both GM richness (0, 1, or 2 Pm3 transgenes with different resistance specificities per plot) and GM concentration (0%, 50%, or 100% of all plants in a plot with a Pm3 transgene). Plots with two transgenes had 34.6% less mildew infection and as a consequence 7.3% higher seed yield than plots with one transgene. We conclude that combining genetic modification with mixed cropping techniques could be a promising approach to increase sustainability and productivity in agricultural systems, as the fitness cost of stacking transgenes within individuals may thus be avoided.

Dalitz plot analysis of the D+→π-π+π+ decay

NASA Astrophysics Data System (ADS)

Bonvicini, G.; Cinabro, D.; Dubrovin, M.; Lincoln, A.; Asner, D. M.; Edwards, K. W.; Naik, P.; Briere, R. A.; Ferguson, T.; Tatishvili, G.; Vogel, H.; Watkins, M. E.; Rosner, J. L.; Adam, N. E.; Alexander, J. P.; Cassel, D. G.; Duboscq, J. E.; Ehrlich, R.; Fields, L.; Galik, R. S.; Gibbons, L.; Gray, R.; Gray, S. W.; Hartill, D. L.; Heltsley, B. K.; Hertz, D.; Jones, C. D.; Kandaswamy, J.; Kreinick, D. L.; Kuznetsov, V. E.; Mahlke-Krüger, H.; Mohapatra, D.; Onyisi, P. U. E.; Patterson, J. R.; Peterson, D.; Pivarski, J.; Riley, D.; Ryd, A.; Sadoff, A. J.; Schwarthoff, H.; Shi, X.; Stroiney, S.; Sun, W. M.; Wilksen, T.; Athar, S. B.; Patel, R.; Yelton, J.; Rubin, P.; Cawlfield, C.; Eisenstein, B. I.; Karliner, I.; Kim, D.; Lowrey, N.; Selen, M.; White, E. J.; Wiss, J.; Mitchell, R. E.; Shepherd, M. R.; Besson, D.; Pedlar, T. K.; Cronin-Hennessy, D.; Gao, K. Y.; Hietala, J.; Kubota, Y.; Klein, T.; Lang, B. W.; Poling, R.; Scott, A. W.; Smith, A.; Zweber, P.; Dobbs, S.; Metreveli, Z.; Seth, K. K.; Tomaradze, A.; Ernst, J.; Ecklund, K. M.; Severini, H.; Love, W.; Savinov, V.; Aquines, O.; Lopez, A.; Mehrabyan, S.; Mendez, H.; Ramirez, J.; Huang, G. S.; Miller, D. H.; Pavlunin, V.; Sanghi, B.; Shipsey, I. P. J.; Xin, B.; Adams, G. S.; Anderson, M.; Cummings, J. P.; Danko, I.; Hu, D.; Moziak, B.; Napolitano, J.; He, Q.; Insler, J.; Muramatsu, H.; Park, C. S.; Thorndike, E. H.; Yang, F.; Artuso, M.; Blusk, S.; Butt, J.; Horwitz, N.; Khalil, S.; Li, J.; Menaa, N.; Mountain, R.; Nisar, S.; Randrianarivony, K.; Sia, R.; Skwarnicki, T.; Stone, S.; Wang, J. C.

2007-07-01

Using 281pb-1 of data recorded by the CLEO-c detector in e+e- collisions at the ψ(3770), corresponding to 0.78×106 D+D- pairs, we investigate the substructure of the decay D+→π-π+π+ using the Dalitz plot technique. We find that our data are consistent with the following intermediate states: ρ(770)π+, f2(1270)π+, f0(1370)π+, f0(1500)π+, f0(980)π+, and σπ+. We confirm large S wave contributions at low ππ mass. We set upper limits on contributions of other possible intermediate states. We consider three models of the ππ S wave and find that all of them adequately describe our data.

Dielectric, Impedance and Conduction Behavior of Double Perovskite Pr2CuTiO6 Ceramics

NASA Astrophysics Data System (ADS)

Mahato, Dev K.; Sinha, T. P.

2017-01-01

Polycrystalline Pr2CuTiO6 (PCT) ceramics exhibits dielectric, impedance and modulus characteristics as a possible material for microelectronic devices. PCT was synthesized through the standard solid-state reaction method. The dielectric permittivity, impedance and electric modulus of PCT have been studied in a wide frequency (100 Hz-1 MHz) and temperature (303-593 K) range. Structural analysis of the compound revealed a monoclinic phase at room temperature. Complex impedance Cole-Cole plots are used to interpret the relaxation mechanism, and grain boundary contributions towards conductivity have been estimated. From electrical modulus formalism polarization and conductivity relaxation behavior in PCT have been discussed. Normalization of the imaginary part of impedance ( Z″) and the normalized imaginary part of modulus ( M″) indicates contributions from both long-range and localized relaxation effects. The grain boundary resistance along with their relaxation frequencies are plotted in the form of an Arrhenius plot with activation energy 0.45 eV and 0.46 eV, respectively. The ac conductivity mechanism has been discussed.

Characterization of the efficiency of microbore liquid chromatography columns by van Deemter and kinetic plot analysis.

PubMed

Hetzel, Terence; Loeker, Denise; Teutenberg, Thorsten; Schmidt, Torsten C

2016-10-01

The efficiency of miniaturized liquid chromatography columns with inner diameters between 200 and 300 μm has been investigated using a dedicated micro-liquid chromatography system. Fully porous, core-shell and monolithic commercially available stationary phases were compared applying van Deemter and kinetic plot analysis. The sub-2 μm fully porous as well as the 2.7 μm core-shell particle packed columns showed superior efficiency and similar values for the minimum reduced plate heights (2.56-2.69) before correction for extra-column contribution compared to normal-bore columns. Moreover, the influence of extra-column contribution was investigated to demonstrate the difference between apparent and intrinsic efficiency by replacing the column by a zero dead volume union to determine the band spreading caused by the system. It was demonstrated that 72% of the intrinsic efficiency could be reached. The results of the kinetic plot analysis indicate the superior performance of the sub-2 μm fully porous particle packed column for ultra-fast liquid chromatography. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Effectiveness of Conservation Measures in Reducing Runoff and Soil Loss Under Different Magnitude-Frequency Storms at Plot and Catchment Scales in the Semi-arid Agricultural Landscape.

PubMed

Zhu, T X

2016-03-01

In this study, multi-year stormflow data collected at both catchment and plot scales on an event basis were used to evaluate the efficiency of conservation. At the catchment scale, soil loss from YDG, an agricultural catchment with no conservation measures, was compared with that from CZG, an agricultural catchment with an implementation of a range of conservation measures. With an increase of storm recurrence intervals in the order of <1, 1-2, 2-5, 5-10, 10-20, and >20 years, the mean event sediment yield was 639, 1721, 5779, 15191, 19627, and 47924 t/km(2) in YDG, and was 244, 767, 3077, 4679, 8388, and 15868 t/km(2) in CZG, which represented a reduction effectiveness of 61.8, 55.4, 46.7, 69.2, 57.2, and 66.8 %, respectively. Storm events with recurrence intervals greater than 2 years contributed about two-thirds of the total runoff and sediment in both YDG and CZG catchments. At the plot scale, soil loss from one cultivated slopeland was compared with that from five conservation plots. The mean event soil loss was 1622 t/km(2) on the cultivated slopeland, in comparison to 27.7 t/km(2) on the woodland plot, 213 t/km(2) on the grassland plot, 467 t/km(2) on the alfalfa plot, 236 t/km(2) on the terraceland plot, and 642 t/km(2) on the earthbank plot. Soil loss per unit area from all the plots was significantly less than that from the catchments for storms of all categories of recurrence intervals.

Correlating Species and Spectral Diversity using Remote Sensing in Successional Fields in Virginia

NASA Astrophysics Data System (ADS)

Aneece, I.; Epstein, H. E.

2015-12-01

Conserving biodiversity can help preserve ecosystem properties and function. As the increasing prevalence of invasive plant species threatens biodiversity, advances in remote sensing technology can help monitor invasive species and their effects on ecosystems and plant communities. To assess whether we could study the effects of invasive species on biodiversity using remote sensing, we asked whether species diversity was positively correlated with spectral diversity, and whether correlations differed among spectral regions along the visible and near-infrared range. To answer these questions, we established community plots in secondary successional fields at the Blandy Experimental Farm in northern Virginia and collected vegetation surveys and ground-level hyperspectral data from 350 to 1025 nm wavelengths. Pearson correlation analysis revealed a positive correlation between spectral diversity and species diversity in the visible ranges of 350-499 nm (Pearson correlation=0.69, p=0.01), 500-589 nm (Pearson=0.64, p=0.03), and 590-674 nm (Pearson=0.70, p=0.01), slight positive correlation in the red edge range of 675-754 nm (Pearson=0.56, p=0.06), and no correlation in the near-infrared ranges of 755-924 nm (Pearson=-0.06, p=0.85) and 925-1025 nm (Pearson=0.30, p=0.34). These differences in correlations across spectral regions may be due to the elements that contribute to signatures in those regions and spectral data transformation methods. To investigate the role of pigment variability in these correlations, we estimated chlorophyll, carotenoid, and anthocyanin concentrations of five dominant species in the plots using vegetation indices. Although interspecific variability in pigment levels exceeded intraspecific variability, chlorophyll (F value=118) was more varied within species than carotenoids (F=322) and anthocyanins (F=126), perhaps contributing to the lack of correlation between species diversity and spectral diversity in the red edge region. Interspecific differences in pigment levels, however, make it possible to differentiate species remotely.

New bounds on the Cabibbo-Kobayashi-Maskawa matrix from B{yields}K{pi}{pi} Dalitz plot analyses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ciuchini, M.; Pierini, M.; Silvestrini, L.

2006-09-01

We present a new technique to extract information on the unitarity triangle from the study of B{yields}K{pi}{pi} Dalitz plots. Using the sensitivity of Dalitz analyses to the absolute values and the phases of decay amplitudes and isospin symmetry, we obtain a new constraint on the elements of the CKM matrix. We discuss in detail the role of electroweak penguin contributions and outline future prospects.

Reduced density due to logging and its consequences on mating system and pollen flow in the African mahogany Entandrophragma cylindricum.

PubMed

Lourmas, M; Kjellberg, F; Dessard, H; Joly, H I; Chevallier, M-H

2007-08-01

In tropical forests, selective logging removes large trees that are often the main contributors to pollination. We studied pollination patterns of the African mahogany, Entandrophragma cylindricum (Sapelli). We investigated two plots in Cameroon corresponding to three tree densities: unlogged forest (Ndama 2002), a mildly logged forest 1 year after logging (Ndama 2003) and a severely logged forest 30 years after logging (Dimako). We used four microsatellite markers to perform paternity analysis. Selfing remained below 2% in all treatments. Pollen flow was mainly long distance but with some proximity effects. Average observed within-plot pollination distances were 338, 266 and 385 m, and pollination by trees outside the plots was 70% (Ndama 2002), 74% (Ndama 2003) and 66% (Dimako). Despite sampling a limited number of seeds from a limited number of mother trees, we obtained seeds sired by 35.6-38.3% of the potential within-plot pollen donors. While trees 20 cm in diameter contributed to pollination, results in Dimako suggest that individual larger trees contribute more to pollination than small ones. This effect was not detected in the other treatments. The results suggest extensive pollen flow in Sapelli. Hence, in Sapelli, the main limiting factor for regeneration after logging may be a reduction in the number of trees capable of producing seeds rather genetic effects due to limits to pollen dispersal.

Responses of CO2 Fluxes to Arctic Browning Events in a Range of High Latitude, Shrub-Dominated Ecosystems

NASA Astrophysics Data System (ADS)

Phoenix, G. K.; Treharne, R.; Emberson, L.; Tømmervik, H. A.; Bjerke, J. W.

2017-12-01

Climatic and biotic extreme events can result in considerable damage to arctic vegetation, often at landscape and larger scale. These acute events therefore contribute to the browning observed in some arctic regions. It is of considerable concern, therefore, that such extreme events are increasing in frequency as part of climate change. However, despite the increasing importance of browning events, and the considerable impact they can have on ecosystems, to date there is little understanding of their impacts on ecosystem carbon fluxes. To address this, the impacts of a number of different, commonly occurring, extreme events and their subsequent browning (vegetation damage) on key ecosystem CO2 fluxes were assessed during the growing season at a range of event damaged sites of shrub dominated vegetation. Sites were located from the boreal to High Arctic (64˚N-79˚N) and had been previously been damaged by events of frost-drought, extreme winter warming, ground icing and caterpillar (Epirrita autumnata) outbreaks. Plot-level CO2 fluxes of Ecosystem Exchange (NEE), Gross Primary Productivity (GPP) and Ecosystem Respiration (Reco) were assessed using vegetation chambers. At a sub-set of sites, NDVI (greenness) in flux plots was also assessed by hand-held proximal sensor, allowing the relationship between NDVI of damage plots to CO2 flux to be calculated. Despite the contrasting sites and drivers, damage had consistent, major impacts on all fluxes. All sites showed reductions in GPP and NEE with increasing damage, despite efflux from Reco also declining with damage. When scaled to site-level, reductions of up to 81% of NEE, 51% of GPP and 37% of Reco were observed. In the plot-level NDVI-flux relationship, NDVI was shown to explain up to 91% of variation in GPP, and therefore supports the use of NDVI for estimating changes in ecosystem CO2 flux at larger scales in regions where browning has been driven by extreme events. This work is the first attempt to quantify the impacts of different event drivers of arctic browning on the main ecosystem CO2 fluxes at a range of sites. These insights provide an important step towards incorporating extreme events into our understanding of how ecosystem CO2 balance at high latitudes will respond to continuing climate change.

Paired comparison of water, energy and carbon exchanges over two young maritime pine stands (Pinus pinaster Ait.): effects of thinning and weeding in the early stage of tree growth.

PubMed

Moreaux, Virginie; Lamaud, Eric; Bosc, Alexandre; Bonnefond, Jean-Marc; Medlyn, Belinda E; Loustau, Denis

2011-09-01

The effects of management practices on energy, water and carbon exchanges were investigated in a young pine plantation in south-west France. In 2009-10, carbon dioxide (CO(2)), H(2)O and heat fluxes were monitored using the eddy covariance and sap flow techniques in a control plot (C) with a developed gorse layer, and an adjacent plot that was mechanically weeded and thinned (W). Despite large differences in the total leaf area index and canopy structure, the annual net radiation absorbed was only 4% lower in plot W. We showed that higher albedo in this plot was offset by lower emitted long-wave radiation. Annual evapotranspiration (ET) from plot W was 15% lower, due to lower rainfall interception and transpiration by the tree canopy, partly counterbalanced by the larger evaporation from both soil and regrowing weedy vegetation. The drainage belowground from plot W was larger by 113 mm annually. The seasonal variability of ET was driven by the dynamics of the soil and weed layers, which was more severely affected by drought in plot C. Conversely, the temporal changes in pine transpiration and stem diameter growth were synchronous between sites despite higher soil water content in the weeded plot. At the annual scale, both plots were carbon sinks, but thinning and weeding reduced the carbon uptake by 73%: annual carbon uptake was 243 and 65 g C m(-2) on plots C and W, respectively. Summer drought dramatically impacted the net ecosystem exchange: plot C became a carbon source as the gross primary production (GPP) severely decreased. However, plot W remained a carbon sink during drought, as a result of decreases in both GPP and ecosystem respiration (R(E)). In winter, both plots were carbon sources, plots C and W emitting 67.5 and 32.4 g C m(-2), respectively. Overall, this study highlighted the significant contribution of the gorse layer to mass and energy exchange in young pine plantations.

Runoff initiation, soil detachment and connectivity are enhanced as a consequence of vineyards plantations.

PubMed

Cerdà, A; Keesstra, S D; Rodrigo-Comino, J; Novara, A; Pereira, P; Brevik, E; Giménez-Morera, A; Fernández-Raga, M; Pulido, M; di Prima, S; Jordán, A

2017-11-01

Rainfall-induced soil erosion is a major threat, especially in agricultural soils. In the Mediterranean belt, vineyards are affected by high soil loss rates, leading to land degradation. Plantation of new vines is carried out after deep ploughing, use of heavy machinery, wheel traffic, and trampling. Those works result in soil physical properties changes and contribute to enhanced runoff rates and increased soil erosion rates. The objective of this paper is to assess the impact of the plantation of vineyards on soil hydrological and erosional response under low frequency - high magnitude rainfall events, the ones that under the Mediterranean climatic conditions trigger extreme soil erosion rates. We determined time to ponding, Tp; time to runoff, Tr; time to runoff outlet, Tro; runoff rate, and soil loss under simulated rainfall (55 mm h -1 , 1 h) at plot scale (0.25 m 2 ) to characterize the runoff initiation and sediment detachment. In recent vine plantations (<1 year since plantation; R) compared to old ones (>50 years; O). Slope gradient, rock fragment cover, soil surface roughness, bulk density, soil organic matter content, soil water content and plant cover were determined. Plantation of new vineyards largely impacted runoff rates and soil erosion risk at plot scale in the short term. Tp, Tr and Tro were much shorter in R plots. Tr-Tp and Tro-Tr periods were used as connectivity indexes of water flow, and decreased to 77.5 and 33.2% in R plots compared to O plots. Runoff coefficients increased significantly from O (42.94%) to R plots (71.92%) and soil losses were approximately one order of magnitude lower (1.8 and 12.6 Mg ha -1 h -1 for O and R plots respectively). Soil surface roughness and bulk density are two key factors that determine the increase in connectivity of flows and sediments in recently planted vineyards. Our results confirm that plantation of new vineyards strongly contributes to runoff initiation and sediment detachment, and those findings confirms that soil erosion control strategies should be applied immediately after or during the plantation of vines. Copyright © 2017 Elsevier Ltd. All rights reserved.

Dalitz plot analyses of charmless b-hadron decays at LHCb

NASA Astrophysics Data System (ADS)

Perazzini, Stefano; LHCb Collaboration

2016-04-01

Charmless b-hadron decays are suppressed in the Standard Model by tiny CKM matrix elements which brings the tree amplitudes to levels comparable with loop amplitudes, and potentially New Physics amplitudes. CP violation measurements using Dalitz plot analyses in multi-body decays allow to disentangle these various contributions. In this document we report about the most recent measurements from LHCb in this sector. Firstly, the study of direct CP asymmetries over the Dalitz plane of the B+ →π+h+h- decays and the B+ →K+h+h- decays (where h = π , K), will be presented (through this document the inclusion of charge conjugate is always implied, unless explicitly stated). Then the results obtained studying the B+ → p p ‾h+ decays will be shown. The measurements of the branching ratio of the B+ → Λ ‾ (1520) p (with Λ ‾ (1520) → p ‾K+), of the forward-backward asymmetry of the light meson (π or K) in the p p ‾ rest frame and of the direct CP asymmetry over the B+ → p p ‾h+ Dalitz plane will be discussed.

1H nuclear magnetic resonance-based metabolomic characterization of wines by grape varieties and production areas.

PubMed

Son, Hong-Seok; Kim, Ki Myong; van den Berg, Frans; Hwang, Geum-Sook; Park, Won-Mok; Lee, Cherl-Ho; Hong, Young-Shick

2008-09-10

(1)H NMR spectroscopy was used to investigate the metabolic differences in wines produced from different grape varieties and different regions. A significant separation among wines from Campbell Early, Cabernet Sauvignon, and Shiraz grapes was observed using principal component analysis (PCA) and partial least squares-discriminant analysis (PLS-DA). The metabolites contributing to the separation were assigned to be 2,3-butanediol, lactate, acetate, proline, succinate, malate, glycerol, tartarate, glucose, and phenolic compounds by PCA and PLS-DA loading plots. Wines produced from Cabernet Sauvignon grapes harvested in the continental areas of Australia, France, and California were also separated. PLS-DA loading plots revealed that the level of proline in Californian Cabernet Sauvignon wines was higher than that in Australian and French Cabernet Sauvignon, Australian Shiraz, and Korean Campbell Early wines, showing that the chemical composition of the grape berries varies with the variety and growing area. This study highlights the applicability of NMR-based metabolomics with multivariate statistical data sets in determining wine quality and product origin.

magicaxis: Pretty scientific plotting with minor-tick and log minor-tick support

NASA Astrophysics Data System (ADS)

Robotham, Aaron S. G.

2016-04-01

The R suite magicaxis makes useful and pretty plots for scientific plotting and includes functions for base plotting, with particular emphasis on pretty axis labelling in a number of circumstances that are often used in scientific plotting. It also includes functions for generating images and contours that reflect the 2D quantile levels of the data designed particularly for output of MCMC posteriors where visualizing the location of the 68% and 95% 2D quantiles for covariant parameters is a necessary part of the post MCMC analysis, can generate low and high error bars, and allows clipping of values, rejection of bad values, and log stretching.

Biomass Development in SRI Field Under Unmaintained Alternate Wetting-Drying Irrigation

NASA Astrophysics Data System (ADS)

Ardiansyah; Chusnul, A.; Krissandi, W.; Asna, M.

2018-05-01

The aim of this research is to observe biomass development of SRI on farmers practice in three plots with different level. This research observes the farmer practice of SRI and Non-SRI during the uncertainty of irrigation water supply and its effects on paddy biomass development during growth stages and final stage of crop. A farmer group that already understand the principle of SRI, applied this method into several plots of their rented paddy field. Researcher interventions were eliminated from their action, so it is purely on farmers decision on managing their SRI plots. Three plots from both SRI and Non-SRI were chosen based on the position of the plot related their access to water. First plots had direct access to water from tertiary irrigation channel (on farm). Second plots were received water from previous upper plots and drainage water into other plots. Third plots were in the bottom position, where they received water from upper plot, and drainage water into farm drainage channel. Result shows there are similar patterns of root, straw, and leaves of biomass during crop growth. On the other hand, during generative phase, grain development shows different pattern and resulting different biomass in harvest time. Second plot, (of SRI) that has water from first plot has the average of biomass grain per plant of 54.4, higher than first plot and third plot, which are 33.8 g and 38.4. Average biomass in second plot is 74.6 g, higher than first and third plot, which are 49.9 g and 52.3 g.

Changes in stem quality of young thinned hardwoods

Treesearch

David L. Sonderman; David L. Sonderman

1986-01-01

Describes changes in limb-related defects on 18-year-old, even-aged hardwoods 6 years after thinning. Stocking levels of 30, 45, and 60 percent were studied. There were fewer defects per square foot of surface area in the higher stocking plots than in the lower stocking plots. The average number of live limbs decreased 83 percent in the unthinned plots and increased...

Radiative corrections to the η(') Dalitz decays

NASA Astrophysics Data System (ADS)

Husek, Tomáš; Kampf, Karol; Novotný, Jiří; Leupold, Stefan

2018-05-01

We provide the complete set of radiative corrections to the Dalitz decays η(')→ℓ+ℓ-γ beyond the soft-photon approximation, i.e., over the whole range of the Dalitz plot and with no restrictions on the energy of a radiative photon. The corrections inevitably depend on the η(')→ γ*γ(*) transition form factors. For the singly virtual transition form factor appearing, e.g., in the bremsstrahlung correction, recent dispersive calculations are used. For the one-photon-irreducible contribution at the one-loop level (for the doubly virtual form factor), we use a vector-meson-dominance-inspired model while taking into account the η -η' mixing.

Transport of cyazofamid and kresoxim methyl in runoff at the plot and catchment scales

NASA Astrophysics Data System (ADS)

Lefrancq, Marie; Joaquín García Verdú, Antonio; Maillard, Elodie; Imfeld, Gwenaël; Payraudeau, Sylvain

2013-04-01

Surface runoff and erosion during the course of rainfall events represent major processes of pesticides transport from agricultural land to aquatic ecosystem. In general, field and catchment studies on pesticide transfer are carried out separately. A study at both scales may enable to improve the understanding of scale effects on processes involved in pesticides transport and to give clues on the source areas within an agricultural catchment. In this study, the transport in runoff of two widely used fungicides, i.e. kresoxim methyl (KM) and cyazofamid (CY) was assessed in a 43 ha vineyard catchment and the relative contribution of the total fungicides export from one representative plot was evaluated. During an entire period of fungicide application, from May to August 2011, the discharge and loads of dissolved and particle-laden KM and CY were monitored at the plot and catchment scales. The results showed larger export coefficient of KM and CY from catchment (0.064 and 0.041‰ for KM and CY respectively) than from the studied plot (0.009 and 0.023 ‰ for KM and CY respectively). It suggests that the plot margins especially the road network contributed as well to the fungicide loads. This result underlines the impact of fungicide drift on non-target areas. Furthermore, a larger rainfall threshold is necessary at the plot scale to trigger runoff and mobilise pesticides than on the road network. At the plot scale, a rapid dissipation of the both fungicides in the top soil was observed. It highlights that the risky period encompasses the first rainfall events triggering runoff after the applications. At both scales, KM and CY were not detected in suspended solids (i.e. > 0.7 µm). However their partitioning in runoff water differed. 64.1 and 91.8% of the KM load was detected in the dissolved phase (i.e. < 0.22 µm) at the plot and catchment scales respectively, whereas 98.7 and 100% of the CY load was detected in the particulate phase (i.e. between 0.22 and 0.7 µm) at the plot and catchment scales respectively. Although KM and CY have similar lab-defined properties, our results showed that their behaviour in field is different suggesting that these properties are insufficient to assess their transport and fate on site. This study highlights that assessing fungicides export at two different scales enable to improve the understanding of period and source areas of contamination within an agricultural catchment.

Recall of Television Content as a Function of Content Type and Level of Production Feature Use.

ERIC Educational Resources Information Center

Calvert, Sandra; Watkins, Bruce

This study investigated developmental changes in children's recall of televised central and incidental content. Central content was plot-relevant; incidental content was peripheral to the plot. Both content types were classified at two levels of production features, high salience and low salience. High salience features were high action, loud…

Cu, Zn and Mn uptake and redistribution in Cabernet Sauvignon grapes and wine: effect of soil metal content and plant vigor

NASA Astrophysics Data System (ADS)

Concepción Ramos, Maria; Romero, María Paz

2015-04-01

This study investigated the influence of leaf thinning on micronutrient (Cu, Zn and Mn) uptake and distribution in grape tissues, in a 16 year-old Cabernet Sauvignon vineyard. The analysis was carried out in two plots with differences in vigor (P1- high and P2-low) grown in calcareous soils. Vigour was analysed by the NDVI values. In each plot, two treatments (with and without leaf thinning after bloom) were applied. Total and the CaCl2-DTPA extractable fraction of these micronutrients were evaluated. Nutrient concentration in petiole were evaluated from veraison to harvest as well as the concentration of those elements in seeds and skins at ripening and in wines elaborated with grapes grown in each plot and treatment in 2013. Their relationships were evaluated. The soil extractable fraction did not give a good correlation with petiole concentrations. However, Mn in petiole was strongly correlated with soil total Mn. Cu and Zn had higher concentration at veraison than at harvest, while for Mn it was the opposite. Cu concentration in petiole and seeds was greater in the most vigorous plots, but there were not clear differences between treatments. Cu in seeds and skins correlated significantly but there was not correlation with Cu in petiole. Zn concentration in skins was quite similar in both plots, but with higher values in vines without leaf thinning. Zn concentrations in skins were correlated with Zn in petiole but no significant correlation was found with Zn in seeds. Higher concentrations were found in the no thinning treatment in skins. For Mn, petiole concentrations were greater in the high vigorous plot and in the leaf thinning treatment. However, petiole Zn concentrations were greater in the less vigorous plot and without clear effect of leaf thinning. Mn concentration in skins was greater in the less vigorous vines in both treatments and it was inversely correlated with Mn in seeds, but there were no significant correlation between them and Mn in petiole. In wine, significant differences between both plots were found for Cu and Zn, with greater values in the most vigorous vines and with some differences in the wines elaborated with grapes from the leaf thinning treatment and without it. Cu levels in wine ranged between 0.78 and 0.96 mg/l in plot 1 and between 0.28 and 0.44 mg/L in plot 2, respectively for the areas with and without leaf thinning. For Zn, levels ranged between 0.76 and 0.74 in plot 1and between 0.24 and 0.22 mg/L in plot 2. However, no differences were found between plots for Mn. Mn levels in wine ranged between 1 and 1.9 mg/L in plot 1 and between 1.12 and 1.2 mg/L in plot 2. This behavior was similar to that found in the skins and seed analysis.

Forest disturbance spurs growth of modeling and technology

NASA Astrophysics Data System (ADS)

Bohrer, G.; Matheny, A. M.; Mirfenderesgi, G.; Morin, T. H.; Rey Sanchez, A. C.; Gough, C. M.; Vogel, C. S.; Nadelhoffer, K. J.; Curtis, P.

2016-12-01

As new opportunities for scientific exploration open, needs for data generate a drive for innovative developments of new research tools. The Forest Accelerated Succession ExperimenT (FASET) was enacted in 2007, continuous flux observations at the University of Michigan Biological Station (UMBS) since 2000. FASET is a large-scale ecological experiment testing the immediate and intermediate term effects of disturbance, and eventually, the role of succession and community composition on forest flux dynamics. Decades-long tree-level observations in the UMBS forest, combined with the long term flux observations allowed us to match the bottom-up accumulated response of individual trees with the top-down whole-plot response measured from the flux tower. However, data describing tree-level canopy structure and hydrological response over an entire plot were not readily available. Unintentionally, FASET became both a motivation and a test-bed for new research tools and approaches. We expanded the operation and analysis approach for a portable canopy LiDARfor 3-D measurements meter-scale canopy structure. We matched canopy LiDAR measurements with root measurements from ground penetrating radar. To study the hydrological effects of the disturbance, we instrumented a large number of trees with Granier-style sap flux sensors. We further developed an approach to use frequency domain reflectometry sensors for continuous measurements of tree water content. We developed an approach to combine plot census, allometry and sap-flux observations in a bottom-up fashion to compare with plot-level EC transpiration rates. We found that while the transpirational water demand in the disturbance plot increased, overall evapotranspiration decreased. This decrease, however, is not uniform across species. A new individual-plant to ecosystem scale hydrodynamic model (FETCH2) demonstrates how specific traits translate to intra-daily differences in plot-level transpiration dynamics.

Dalitz plot analysis of Ds+→K+K-π+

NASA Astrophysics Data System (ADS)

Del Amo Sanchez, P.; Lees, J. P.; Poireau, V.; Prencipe, E.; Tisserand, V.; Garra Tico, J.; Grauges, E.; Martinelli, M.; Milanes, D. A.; Palano, A.; Pappagallo, M.; Eigen, G.; Stugu, B.; Sun, L.; Brown, D. N.; Kerth, L. T.; Kolomensky, Yu. G.; Lynch, G.; Osipenkov, I. L.; Koch, H.; Schroeder, T.; Asgeirsson, D. J.; Hearty, C.; Mattison, T. S.; McKenna, J. A.; Khan, A.; Blinov, V. E.; Buzykaev, A. R.; Druzhinin, V. P.; Golubev, V. B.; Kravchenko, E. A.; Onuchin, A. P.; Serednyakov, S. I.; Skovpen, Yu. I.; Solodov, E. P.; Todyshev, K. Yu.; Yushkov, A. N.; Bondioli, M.; Curry, S.; Kirkby, D.; Lankford, A. J.; Mandelkern, M.; Martin, E. C.; Stoker, D. P.; Atmacan, H.; Gary, J. W.; Liu, F.; Long, O.; Vitug, G. M.; Campagnari, C.; Hong, T. M.; Kovalskyi, D.; Richman, J. D.; West, C.; Eisner, A. M.; Heusch, C. A.; Kroseberg, J.; Lockman, W. S.; Martinez, A. J.; Schalk, T.; Schumm, B. A.; Seiden, A.; Winstrom, L. O.; Cheng, C. H.; Doll, D. A.; Echenard, B.; Hitlin, D. G.; Ongmongkolkul, P.; Porter, F. C.; Rakitin, A. Y.; Andreassen, R.; Dubrovin, M. S.; Mancinelli, G.; Meadows, B. T.; Sokoloff, M. D.; Bloom, P. C.; Ford, W. T.; Gaz, A.; Nagel, M.; Nauenberg, U.; Smith, J. G.; Wagner, S. R.; Ayad, R.; Toki, W. H.; Jasper, H.; Karbach, T. M.; Petzold, A.; Spaan, B.; Kobel, M. J.; Schubert, K. R.; Schwierz, R.; Bernard, D.; Verderi, M.; Clark, P. J.; Playfer, S.; Watson, J. E.; Andreotti, M.; Bettoni, D.; Bozzi, C.; Calabrese, R.; Cecchi, A.; Cibinetto, G.; Fioravanti, E.; Franchini, P.; Garzia, I.; Luppi, E.; Munerato, M.; Negrini, M.; Petrella, A.; Piemontese, L.; Baldini-Ferroli, R.; Calcaterra, A.; de Sangro, R.; Finocchiaro, G.; Nicolaci, M.; Pacetti, S.; Patteri, P.; Peruzzi, I. M.; Piccolo, M.; Rama, M.; Zallo, A.; Contri, R.; Guido, E.; Lo Vetere, M.; Monge, M. R.; Passaggio, S.; Patrignani, C.; Robutti, E.; Tosi, S.; Bhuyan, B.; Prasad, V.; Lee, C. L.; Morii, M.; Edwards, A. J.; Adametz, A.; Marks, J.; Uwer, U.; Bernlochner, F. U.; Ebert, M.; Lacker, H. M.; Lueck, T.; Volk, A.; Dauncey, P. D.; Tibbetts, M.; Behera, P. K.; Mallik, U.; Chen, C.; Cochran, J.; Crawley, H. B.; Dong, L.; Meyer, W. T.; Prell, S.; Rosenberg, E. I.; Rubin, A. E.; Gritsan, A. V.; Guo, Z. J.; Arnaud, N.; Davier, M.; Derkach, D.; Firmino da Costa, J.; Grosdidier, G.; Le Diberder, F.; Lutz, A. M.; Malaescu, B.; Perez, A.; Roudeau, P.; Schune, M. H.; Serrano, J.; Sordini, V.; Stocchi, A.; Wang, L.; Wormser, G.; Lange, D. J.; Wright, D. M.; Bingham, I.; Chavez, C. A.; Coleman, J. P.; Fry, J. R.; Gabathuler, E.; Gamet, R.; Hutchcroft, D. E.; Payne, D. J.; Touramanis, C.; Bevan, A. J.; di Lodovico, F.; Sacco, R.; Sigamani, M.; Cowan, G.; Paramesvaran, S.; Wren, A. C.; Brown, D. N.; Davis, C. L.; Denig, A. G.; Fritsch, M.; Gradl, W.; Hafner, A.; Alwyn, K. E.; Bailey, D.; Barlow, R. J.; Jackson, G.; Lafferty, G. D.; Anderson, J.; Cenci, R.; Jawahery, A.; Roberts, D. A.; Simi, G.; Tuggle, J. M.; Dallapiccola, C.; Salvati, E.; Cowan, R.; Dujmic, D.; Sciolla, G.; Zhao, M.; Lindemann, D.; Patel, P. M.; Robertson, S. H.; Schram, M.; Biassoni, P.; Lazzaro, A.; Lombardo, V.; Palombo, F.; Stracka, S.; Cremaldi, L.; Godang, R.; Kroeger, R.; Sonnek, P.; Summers, D. J.; Nguyen, X.; Simard, M.; Taras, P.; de Nardo, G.; Monorchio, D.; Onorato, G.; Sciacca, C.; Raven, G.; Snoek, H. L.; Jessop, C. P.; Knoepfel, K. J.; Losecco, J. M.; Wang, W. F.; Corwin, L. A.; Honscheid, K.; Kass, R.; Morris, J. P.; Blount, N. L.; Brau, J.; Frey, R.; Igonkina, O.; Kolb, J. A.; Rahmat, R.; Sinev, N. B.; Strom, D.; Strube, J.; Torrence, E.; Castelli, G.; Feltresi, E.; Gagliardi, N.; Margoni, M.; Morandin, M.; Posocco, M.; Rotondo, M.; Simonetto, F.; Stroili, R.; Ben-Haim, E.; Bonneaud, G. R.; Briand, H.; Calderini, G.; Chauveau, J.; Hamon, O.; Leruste, Ph.; Marchiori, G.; Ocariz, J.; Prendki, J.; Sitt, S.; Biasini, M.; Manoni, E.; Rossi, A.; Angelini, C.; Batignani, G.; Bettarini, S.; Carpinelli, M.; Casarosa, G.; Cervelli, A.; Forti, F.; Giorgi, M. A.; Lusiani, A.; Neri, N.; Paoloni, E.; Rizzo, G.; Walsh, J. J.; Lopes Pegna, D.; Lu, C.; Olsen, J.; Smith, A. J. S.; Telnov, A. V.; Anulli, F.; Baracchini, E.; Cavoto, G.; Faccini, R.; Ferrarotto, F.; Ferroni, F.; Gaspero, M.; Li Gioi, L.; Mazzoni, M. A.; Piredda, G.; Renga, F.; Hartmann, T.; Leddig, T.; Schröder, H.; Waldi, R.; Adye, T.; Franek, B.; Olaiya, E. O.; Wilson, F. F.; Emery, S.; Hamel de Monchenault, G.; Vasseur, G.; Yèche, Ch.; Zito, M.; Allen, M. T.; Aston, D.; Bard, D. J.; Bartoldus, R.; Benitez, J. F.; Cartaro, C.; Convery, M. R.; Dorfan, J.; Dubois-Felsmann, G. P.; Dunwoodie, W.; Field, R. C.; Franco Sevilla, M.; Fulsom, B. G.; Gabareen, A. M.; Graham, M. T.; Grenier, P.; Hast, C.; Innes, W. R.; Kelsey, M. H.; Kim, H.; Kim, P.; Kocian, M. L.; Leith, D. W. G. S.; Li, S.; Lindquist, B.; Luitz, S.; Luth, V.; Lynch, H. L.; Macfarlane, D. B.; Marsiske, H.; Muller, D. R.; Neal, H.; Nelson, S.; O'Grady, C. P.; Ofte, I.; Perl, M.; Pulliam, T.; Ratcliff, B. N.; Roodman, A.; Salnikov, A. A.; Santoro, V.; Schindler, R. H.; Schwiening, J.; Snyder, A.; Su, D.; Sullivan, M. K.; Sun, S.; Suzuki, K.; Thompson, J. M.; Va'Vra, J.; Wagner, A. P.; Weaver, M.; Wisniewski, W. J.; Wittgen, M.; Wright, D. H.; Wulsin, H. W.; Yarritu, A. K.; Young, C. C.; Ziegler, V.; Chen, X. R.; Park, W.; Purohit, M. V.; White, R. M.; Wilson, J. R.; Randle-Conde, A.; Sekula, S. J.; Bellis, M.; Burchat, P. R.; Miyashita, T. S.; Ahmed, S.; Alam, M. S.; Ernst, J. A.; Pan, B.; Saeed, M. A.; Zain, S. B.; Guttman, N.; Soffer, A.; Lund, P.; Spanier, S. M.; Eckmann, R.; Ritchie, J. L.; Ruland, A. M.; Schilling, C. J.; Schwitters, R. F.; Wray, B. C.; Izen, J. M.; Lou, X. C.; Bianchi, F.; Gamba, D.; Pelliccioni, M.; Bomben, M.; Lanceri, L.; Vitale, L.; Lopez-March, N.; Martinez-Vidal, F.; Oyanguren, A.; Albert, J.; Banerjee, Sw.; Choi, H. H. F.; Hamano, K.; King, G. J.; Kowalewski, R.; Lewczuk, M. J.; Lindsay, C.; Nugent, I. M.; Roney, J. M.; Sobie, R. J.; Gershon, T. J.; Harrison, P. F.; Latham, T. E.; Pennington, M. R.; Puccio, E. M. T.; Band, H. R.; Dasu, S.; Flood, K. T.; Pan, Y.; Prepost, R.; Vuosalo, C. O.; Wu, S. L.

2011-03-01

We perform a Dalitz plot analysis of about 100 000 Ds+ decays to K+K-π+ and measure the complex amplitudes of the intermediate resonances which contribute to this decay mode. We also measure the relative branching fractions of Ds+→K+K+π- and Ds+→K+K+K-. For this analysis we use a 384 fb-1 data sample, recorded by the BABAR detector at the PEP-II asymmetric-energy e+e- collider running at center-of-mass energies near 10.58 GeV.

Influence plots for LASSO

DOE PAGES

Jang, Dae -Heung; Anderson-Cook, Christine Michaela

2016-11-22

With many predictors in regression, fitting the full model can induce multicollinearity problems. Least Absolute Shrinkage and Selection Operation (LASSO) is useful when the effects of many explanatory variables are sparse in a high-dimensional dataset. Influential points can have a disproportionate impact on the estimated values of model parameters. Here, this paper describes a new influence plot that can be used to increase understanding of the contributions of individual observations and the robustness of results. This can serve as a complement to other regression diagnostics techniques in the LASSO regression setting. Using this influence plot, we can find influential pointsmore » and their impact on shrinkage of model parameters and model selection. Lastly, we provide two examples to illustrate the methods.« less

Figure12

EPA Pesticide Factsheets

NCL script: cmaq_ensemble_isam_4panels_subdomain.nclNetcdf input file for NCL script, containing ensemble means and standard deviation of ISAM SO4 and O3 contributions from IPM: test.ncPlot (ps): maps_isam_mean_std_lasthour_ipm_so4_o3_east.psPlot (pdf): maps_isam_mean_std_lasthour_ipm_so4_o3_east.pdfPlot (ncgm): maps_isam_mean_std_lasthour_ipm_so4_o3_east.ncgmThis dataset is associated with the following publication:Gilliam , R., C. Hogrefe , J. Godowitch, S. Napelenok , R. Mathur , and S.T. Rao. Impact of inherent meteorology uncertainty on air quality model predictions. JOURNAL OF GEOPHYSICAL RESEARCH-ATMOSPHERES. American Geophysical Union, Washington, DC, USA, 120(23): 12,259–12,280, (2015).

ImagingReso: A Tool for Neutron Resonance Imaging

DOE PAGES

Zhang, Yuxuan; Bilheux, Jean -Christophe

2017-11-01

ImagingReso is an open-source Python library that simulates the neutron resonance signal for neutron imaging measurements. By defining the sample information such as density, thickness in the neutron path, and isotopic ratios of the elemental composition of the material, this package plots the expected resonance peaks for a selected neutron energy range. Various sample types such as layers of single elements (Ag, Co, etc. in solid form), chemical compounds (UO 3, Gd 2O 3, etc.), or even multiple layers of both types can be plotted with this package. As a result, major plotting features include display of the transmission/attenuation inmore » wavelength, energy, and time scale, and show/hide elemental and isotopic contributions in the total resonance signal.« less

Influence plots for LASSO

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jang, Dae -Heung; Anderson-Cook, Christine Michaela

With many predictors in regression, fitting the full model can induce multicollinearity problems. Least Absolute Shrinkage and Selection Operation (LASSO) is useful when the effects of many explanatory variables are sparse in a high-dimensional dataset. Influential points can have a disproportionate impact on the estimated values of model parameters. Here, this paper describes a new influence plot that can be used to increase understanding of the contributions of individual observations and the robustness of results. This can serve as a complement to other regression diagnostics techniques in the LASSO regression setting. Using this influence plot, we can find influential pointsmore » and their impact on shrinkage of model parameters and model selection. Lastly, we provide two examples to illustrate the methods.« less

A graphics package for meteorological data, version 1.5

NASA Technical Reports Server (NTRS)

Moorthi, Shrinivas; Suarez, Max; Phillips, Bill; Schemm, Jae-Kyung; Schubert, Siegfried

1989-01-01

A plotting package has been developed to simplify the task of plotting meteorological data. The calling sequences and examples of high level yet flexible routines which allow contouring, vectors and shading of cylindrical, polar, orthographic and Mollweide (egg) projections are given. Routines are also included for contouring pressure-latitude and pressure-longitude fields with linear or log scales in pressure (interpolation to fixed grid interval is done automatically). Also included is a fairly general line plotting routine. The present version (1.5) produces plots on WMS laser printers and uses graphics primitives from WOLFPLOT.

Effectiveness of cow manure and mycorrhiza on the growth of soybean

NASA Astrophysics Data System (ADS)

Muktiyanta, M. N. A.; Samanhudi; Yunus, A.; Pujiasmanto, B.; Minardi, S.

2018-03-01

Soybean is one of the major food crop commodities in Indonesia. The needs of soybean each year is always increasing, but the the production rate is low. The research aimed to know the influence of treatment doses of cow manure and mycorrhiza towards growth and yield of soybeans. This research was conducted using Randomized Complete Block Design with two factors. The first factor is the dose of cow manure: S0 (0 g/plot), S1 (781.25 g/plot), S2 (1562.5 g/plot), and S3 (2343.75 g/plot). The second factor is the dose of mycorrhiza: M0 (0 g/plot), M1 (100 g/plot), and M2 (200 g/plot). The observed parameters is plant height, the number of productive branches, weight of 100 seeds, root length, fresh weight of biomass, dry weight of biomass, conversion calculation results of soybeans per hectacre and the percentage of roots infected with mycorrhiza. Data were analyzed with ANOVA at 5% significance level, continued with Duncan test at 5% confidence level. The results showed that no interaction between the two treatments. Doses of cow manure provides significant influence to plant height and the length of the root. Whereas, the doses of mycorrhiza provides significant effect to the number of productive branch, weight of 100 seeds, dry weight of biomass, and the conversion of soybean yield per hectare.

Analysis of vegetation in an Imperata grassland of Barak valley, Assam.

PubMed

Astapati, Ashim Das; Das, Ashesh Kumar

2012-09-01

Imperata grassland at Dorgakona, Barak valley, North Eastern India was analyzed for species composition and diversity pattern in relation to traditional management practices. 19 families were in the burnt and unburnt plots of the study site with Poaceae as the most dominant one. 29 species occurred in the burnt plot and 28 in the unburnt plot. Most of the species were common in both the plots. The pattern of frequency diagrams indicated that the vegetation was homogeneous. Imperata cylindrica, a rhizomatous grass was the dominant species based on density (318.75 and 304.18 nos. m(-2)), basal cover (158.22 and 148.34 cm2 m(-2)) and Importance value index (IVI) (132.64 and 138.74) for the burnt and unburnt plots respectively. Borreria pusilla was the co-dominant species constituting Imperata-Borreria assemblage of the studied grassland. It was observed that B. pusilla (162.25 nos. m(-2) and 50.37 nos. m(-2), I. cylindrica (318.75 nos. m(-2) and 304.18 nos. m(-2)) and Setaria glauca (24.70 nos. m(-2) and 16.46 nos. m(-2) were benefited from burning as shown by the values sequentially placed for burnt and unburnt plots. Certain grasses like Chrysopogon aciculatus and Sacciolepis indica were restricted to burnt plot while Oxalis corniculata showed its presence to unburnt plot. Grasses dominated the grassland as revealed by their contribution to the mean percentage cover of 72% in burnt plot and 76% in umburnt plot. The dominance-diversity curves in the study site approaches a log normal series distribution suggesting that the resources are shared by the constituent species. Seasonal pattern in diversity index suggested definite influence of climatic seasonality on species diversity; rainy season was conducive for maximum diversity (1.40 and 1.38 in the burnt and unburnt plots, respectively). Dominance increased with concentration of fewer species (0.0021 in burnt plot and 0.0055 in unbumt plot) in summer and behaves inversely to index of diversity. This study showed that the traditional management practices benefits the farmers as it promote grassland regeneration with I. cylindrica as the dominant grass.

Experimental evidence of human recreational disturbance effects on bird-territory establishment.

PubMed

Bötsch, Yves; Tablado, Zulima; Jenni, Lukas

2017-07-12

The worldwide increase in human outdoor activities raises concerns for wildlife. Human disturbances, even at low levels, are likely to impact species during sensitive periods of the annual cycle. However, experimental studies during the putative sensitive period of territory establishment of birds which not only investigate low disturbance levels, but which also exclude the effect of habitat modification (e.g. walking trails) are lacking. Here, we experimentally disturbed birds in forest plots by walking through twice a day during territory establishment. Later we compared the breeding bird community of experimentally disturbed plots with that of undisturbed control plots. We discovered that the number of territories (-15.0%) and species richness (-15.2%) in disturbed plots were substantially reduced compared with control plots. Species most affected included those sensitive to human presence (assessed by flight-initiation distances), open-cup nesters and above-ground foragers. Long-distance migrants, however, were unaffected due to their arrival after experimental disturbance took place. These findings highlight how territory establishment is a sensitive period for birds, when even low levels of human recreation may be perceived as threatening, and alter settlement decisions. This can have important implications for the conservation of species, which might go unnoticed when focusing only on already established birds. © 2017 The Author(s).

Texture Analysis of Recurrence Plots Based on Wavelets and PSO for Laryngeal Pathologies Detection.

PubMed

Souza, Taciana A; Vieira, Vinícius J D; Correia, Suzete E N; Costa, Silvana L N C; de A Costa, Washington C; Souza, Micael A

2015-01-01

This paper deals with the discrimination between healthy and pathological speech signals using recurrence plots and wavelet transform with texture features. Approximation and detail coefficients are obtained from the recurrence plots using Haar wavelet transform, considering one decomposition level. The considered laryngeal pathologies are: paralysis, Reinke's edema and nodules. Accuracy rates above 86% were obtained by means of the employed method.

Effects of hardwood retention, season of year, and landform on the perceived scenic beauty of forest plots in the Ouachita Mountains

Treesearch

James H. Gramann; Victor A. Rudis

1994-01-01

Results from a study of the within-stand visual effects of alternative reproduction cutting methods on 20 experimental plots in the Ouachita National Forest are presented. Treatments varied in their level of hardwood retention from complete suppression of hardwoods to retention of 30 ft2/acre of basal area. Using color transparency film, plots...

Quantifying allometric model uncertainty for plot-level live tree biomass stocks with a data-driven, hierarchical framework

Treesearch

Brian J. Clough; Matthew B. Russell; Grant M. Domke; Christopher W. Woodall

2016-01-01

Accurate uncertainty assessments of plot-level live tree biomass stocks are an important precursor to estimating uncertainty in annual national greenhouse gas inventories (NGHGIs) developed from forest inventory data. However, current approaches employed within the United States’ NGHGI do not specifically incorporate methods to address error in tree-scale biomass...

Forest carbon in lowland Papua New Guinea: Local variation and the importance of small trees

PubMed Central

Vincent, John B; Henning, Bridget; Saulei, Simon; Sosanika, Gibson; Weiblen, George D

2015-01-01

Efforts to incentivize the reduction of carbon emissions from deforestation and forest degradation require accurate carbon accounting. The extensive tropical forest of Papua New Guinea (PNG) is a target for such efforts and yet local carbon estimates are few. Previous estimates, based on models of neotropical vegetation applied to PNG forest plots, did not consider such factors as the unique species composition of New Guinea vegetation, local variation in forest biomass, or the contribution of small trees. We analysed all trees >1 cm in diameter at breast height (DBH) in Melanesia's largest forest plot (Wanang) to assess local spatial variation and the role of small trees in carbon storage. Above-ground living biomass (AGLB) of trees averaged 210.72 Mg  ha−1 at Wanang. Carbon storage at Wanang was somewhat lower than in other lowland tropical forests, whereas local variation among 1-ha subplots and the contribution of small trees to total AGLB were substantially higher. We speculate that these differences may be attributed to the dynamics of Wanang forest where erosion of a recently uplifted and unstable terrain appears to be a major source of natural disturbance. These findings emphasize the need for locally calibrated forest carbon estimates if accurate landscape level valuation and monetization of carbon is to be achieved. Such estimates aim to situate PNG forests in the global carbon context and provide baseline information needed to improve the accuracy of PNG carbon monitoring schemes. PMID:26074730

Dalitz plot analysis of the D+→K-π+π+ decay

NASA Astrophysics Data System (ADS)

Bonvicini, G.; Cinabro, D.; Dubrovin, M.; Lincoln, A.; Naik, P.; Rademacker, J.; Asner, D. M.; Edwards, K. W.; Reed, J.; Briere, R. A.; Ferguson, T.; Tatishvili, G.; Vogel, H.; Watkins, M. E.; Rosner, J. L.; Alexander, J. P.; Cassel, D. G.; Duboscq, J. E.; Ehrlich, R.; Fields, L.; Gibbons, L.; Gray, R.; Gray, S. W.; Hartill, D. L.; Heltsley, B. K.; Hertz, D.; Hunt, J. M.; Kandaswamy, J.; Kreinick, D. L.; Kuznetsov, V. E.; Ledoux, J.; Mahlke-Krüger, H.; Mohapatra, D.; Onyisi, P. U. E.; Patterson, J. R.; Peterson, D.; Riley, D.; Ryd, A.; Sadoff, A. J.; Shi, X.; Stroiney, S.; Sun, W. M.; Wilksen, T.; Athar, S. B.; Patel, R.; Yelton, J.; Rubin, P.; Eisenstein, B. I.; Karliner, I.; Mehrabyan, S.; Lowrey, N.; Selen, M.; White, E. J.; Wiss, J.; Mitchell, R. E.; Shepherd, M. R.; Besson, D.; Pedlar, T. K.; Cronin-Hennessy, D.; Gao, K. Y.; Hietala, J.; Kubota, Y.; Klein, T.; Lang, B. W.; Poling, R.; Scott, A. W.; Zweber, P.; Dobbs, S.; Metreveli, Z.; Seth, K. K.; Tomaradze, A.; Libby, J.; Powell, A.; Wilkinson, G.; Ecklund, K. M.; Love, W.; Savinov, V.; Lopez, A.; Mendez, H.; Ramirez, J.; Ge, J. Y.; Miller, D. H.; Shipsey, I. P. J.; Xin, B.; Adams, G. S.; Anderson, M.; Cummings, J. P.; Danko, I.; Hu, D.; Moziak, B.; Napolitano, J.; He, Q.; Insler, J.; Muramatsu, H.; Park, C. S.; Thorndike, E. H.; Yang, F.; Artuso, M.; Blusk, S.; Khalil, S.; Li, J.; Mountain, R.; Nisar, S.; Randrianarivony, K.; Sultana, N.; Skwarnicki, T.; Stone, S.; Wang, J. C.; Zhang, L. M.

2008-09-01

We perform a Dalitz plot analysis of D+→K-π+π+ decay with the CLEO-c data set of 572pb-1 of e+e- collisions accumulated at the ψ(3770). This corresponds to 1.6×106 D+D- pairs from which we select 140 793 candidate events with a small background of 1.1%. We compare our results with previous measurements using the isobar model. We modify the isobar model with an improved description of some of the contributing resonances and get better agreement with our data. We also consider a quasi-model-independent approach and measure the magnitude and phase of the contributing Kπ S wave in the range of invariant masses from the threshold to the maximum in this decay. This gives an improved description of our data over the isobar model. Finally we allow for an isospin-two π+π+ S wave contribution and find that adding this to both the isobar model and the quasi-model-independent approach gives the best description of our data.

Polycyclic aromatic hydrocarbons pollution effect on soil biological activity in the anthropogenic contaminated area

NASA Astrophysics Data System (ADS)

Batukaev, Abdulmalik; Sushkova, Svetlana; Minkina, Tatiana; Antonenko, Elena; Salamova, Anzhelika; Gimp, Alina; Deryabkina, Irina

2017-04-01

Polycyclic aromatic hydrocarbons (PAHs) are one of the most significant environmental contaminants with mutagenic and carcinogenic properties to all living organisms. The changes in microbial community structure in technogenic polluted soil may be used as tools for predicting and monitoring natural degradation and for search the most effective and appropriate pathways of bioremediation. The present study is aimed to research the biological activity of the soil in the emission zone of Novocherkassk Power station (NPs) (Russia) polluted by PAHs in 2015. The NPs is one of the largest thermal power stations in the south of Russia burning low-quality coal appurtenant the enterprises of I hazardous class. Monitoring plots were located on virgin or no-till fallow areas and not subject to the sanitary-protection zone of the NPs. Soil samples were taken from a depth of 0- to 20-cm, because the major part of PAHs are accumulated in the surface soil layer. The soils of the plots mainly include Chernozems Calcic (plots 1, 4, 5, 7, 9 and 10), Phaeozems Haplic (plots 3, 6, 8 and 11) Fluvisols Umbric (plots 2 and 12). In the soil of 12 monitoring plots located around NPs there were determined the main enzymes, abundance of soil bacteria and 17 priority PAHs. PAHs extraction from soil was performed by new developed ecologically clean method of subcritical water extraction without organic solvents (Sushkova et al., 2015). The level of PAHs around NPs is high at the nearest to factory monitoring plots situated at distance 1,0-1,2 km and reaches from 1600,1±14,7 up to 373,6±7,1 mkg/kg in the 20-cm soil layer. Gradually decrease of PAHs contamination is observed while increasing the distance from the NPs. The level of highmolecular PAHs (4-6 aromatic rings) exceeds the level of lowmolecular (2-3 aromatic rings) PAHs in all monitoring plots situated though the prevailing wind direction from NPs. The close correlations were found between PAHs content and biological activity parameters in the monitoring plots situated through the prevailing wind direction from NPs. Level of dehydrogenases has high positive correlation with technogenic accumulated biphenyl, acenaphthene and negative correlation with anthracene content in studied soil. The lowmolecular PAHs content of soil influenced activity of dehydrogenases positively. Urease activity of monitoring plots has a high positive correlation with 12 PAHs exclude biphenyl, benzo(a)anthracene, naphthalene. Negative dependence of urease activity was observed for lowmolecular PAHs. The abundance of soil bacteria has a negative correlation with PAHs level. Anthracene has no correlations with abundance of soil bacteria and negatively influences on dehydrogenase, urease. Thus, the most subjected to technogenic pollution in 2015 were monitoring plots situated through the prevailing wind direction from NPs. It was established that ratio of low- and highmolecular PAHs content in soils of monitoring plots is the indicator of technogenic pollution soils. Contamination by PAHs in the affected zone has negative influence at the abundance of soil bacteria. The most number of PAHs has positive correlation with biological activity parameters of soil. This work was supported by grant of the Russian Scientific Foundation № 16-14-10217.

Long-term tree inventory data from mountain forest plots in France.

PubMed

Fuhr, Marc; Cordonnier, Thomas; Courbaud, Benoît; Kunstler, Georges; Mermin, Eric; Riond, Catherine; Tardif, Pascal

2017-04-01

We present repeated tree measurement data from 63 permanent plots in mountain forests in France. Plot elevations range from 800 (lower limit of the montane belt) to 1942 m above sea level (subalpine belt). Forests mainly consist of pure or mixed stands dominated by European beech (Fagus sylvatica), Silver fir (Abies alba), and Norway spruce (Picea abies), in association with various broadleaved species at low elevation and with Arolla pine (Pinus cembra) at high elevation. The plot network includes 23 plots in stands that have not been managed for the last 40 years (at least) and 40 plots in plots managed according to an uneven-aged system with single-tree or small-group selection cutting. Plot sizes range from 0.2 to 1.9 ha. Plots were installed from 1994 to 2004 and remeasured two to five times during the 1994-2015 period. During the first census (installation), living trees more than 7.5 cm in dbh were identified, their diameter at breast height (dbh) was measured and their social status (strata) noted. Trees were spatially located, either with x, y, and z coordinates (40 plots) or within 0.25-ha square subplots (23 plots). In addition, in a subset of plots (58 plots), tree heights and tree crown dimensions were measured on a subset of trees and dead standing trees and stumps were included in the census. Remeasurements after installation include live tree diameters (including recruited trees), tree status (living, damaged, dead, stump), and for a subset of trees, height. At the time of establishment of the plots, plot densities range from 181 to 1328 stems/ha and plot basal areas range from 13.6 to 81.3 m 2 /ha. © 2017 by the Ecological Society of America.

Vibro-Acoustic Forecasts for STS (Space Transportation System) Launches at V23, Vandenberg AFB: Results Summary and the Payload Preparation Room

DTIC Science & Technology

1985-05-08

Displacement Time Series Forecasts for Channels 2 Through 8 and (b) Channels 9 Through 16 33 17. Sample PSD Plots for ( a ) Levels 99 and 119 East Cell Rail...for Sensors at ( a ) Levels 99 and 119 on the West Cell Rail, (b) Level 69 on the East and West Cell Rail Footings, and (c) Level 99 on the West Cell Rail...17. Sample PSD Plots for ( a ) Levels 99 and 119 East Cell Rail Locations, (b) level 69 Sensors on the East and West Cell Rail Footings, and (c) Level

Use of remote sensing techniques to determine the effects of grazing on vegetation cover and dune elevation at assateague island national seashore: Impact of horses

USGS Publications Warehouse

De Stoppelaire, G. H.; Gillespie, T.W.; Brock, J.C.; Tobin, G.A.

2004-01-01

The effects of grazing by feral horses on vegetation and dune topography at Assateague Island National Seashore were investigated using color-infrared imagery, lidar surveys, and field measurements. Five pairs of fenced and unfenced plots (300 m2) established in 1993 on sand flats and small dunes with similar elevation, topography, and vegetation cover were used for this study. Color-infrared imagery from 1998 and field measurements from 2001 indicated that there was a significant difference in vegetation cover between the fenced and unfenced plot-pairs over the study period. Fenced plots contained a higher percentage of vegetation cover that was dominated by American beachgrass (Ammophila breviligulata). Lidar surveys from 1997, 1999, and 2000 showed that there were significant differences in elevation and topography between fenced and unfenced plot-pairs. Fenced plots were, on average, 0.63 m higher than unfenced plots, whereas unfenced plots had generally decreased in elevation after establishment in 1993. Results demonstrate that feral horse grazing has had a significant impact on dune formation and has contributed to the erosion of dunes at Assateague Island. The findings suggest that unless the size of the feral horse population is reduced, grazing will continue to foster unnaturally high rates of dune erosion into the future. In order to maintain the natural processes that historically occurred on barrier islands, much larger fenced exclosures would be required to prevent horse grazing. ?? 2004 Springer Science+Business Media, Inc.

GKS. Minimal Graphical Kernel System C Binding

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simons, R.W.

1985-10-01

GKS (the Graphical Kernel System) is both an American National Standard (ANS) and an ISO international standard graphics package. It conforms to ANS X3.124-1985 and to the May 1985 draft proposal for the GKS C Language Binding standard under development by the X3H3 Technical Committee. This implementation includes level ma (the lowest level of the ANS) and some routines from level mb. The following graphics capabilities are supported: two-dimensional lines, markers, text, and filled areas; control over color, line type, and character height and alignment; multiple simultaneous workstations and multiple transformations; and locator and choice input. Tektronix 4014 and 4115more » terminals are supported, and support for other devices may be added. Since this implementation was developed under UNIX, it uses makefiles, C shell scripts, the ar library maintainer, editor scripts, and other UNIX utilities. Therefore, implementing it under another operating system may require considerable effort. Also included with GKS is the small plot package (SPP), a direct descendant of the WEASEL plot package developed at Sandia. SPP is built on the GKS; therefore, all of the capabilities of GKS are available. It is not necessary to use GKS functions, since entire plots can be produced using only SPP functions, but the addition of GKS will give the programmer added power and flexibility. SPP provides single-call plot commands, linear and logarithmic axis commands, control for optional plotting of tick marks and tick mark labels, and permits plotting of data with or without markers and connecting lines.« less

Attributes of desert tortoise populations at the National Training Center, Central Mojave Desert, California, USA

USGS Publications Warehouse

Berry, K.H.; Bailey, T.Y.; Anderson, K.M.

2006-01-01

We sampled 21 study plots for desert tortoises (Gopherus agassizii) at the National Training Center, Fort Irwin, California. Each plot was sampled once between 1997 and 2003 to obtain a snapshot of population attributes, status, and relationships between tortoise densities and human activities. Densities ranged from <1 to 28 tortoises km-2; overall, tortoises were uncommon to rare at 16 of the 21 plots. Tortoise densities were negatively correlated with death rates, infectious disease (mycoplasmosis), surface disturbance and trash. Health status of tortoises was correlated with some anthropogenic uses. The presence of infectious disease in tortoises was negatively correlated with distances from offices, the Ft. Irwin cantonment, and paved roads. Also, significantly more tortoises with shell disease were found on plots with current and recent military use than on plots with no history of military use. Factors contributing to or causing deaths of tortoises included vehicles, vandalism, predation, mycoplasmosis and shell diseases. Annual death rates for subadult and adult tortoises ranged from 1.9% to 95.2% for the 4 years preceding surveys. Deaths from anthropogenic sources were significantly correlated with surface disturbances, trash, military ordnance, and proximity to offices and paved roads-typical characteristics of military training areas.

Long-term fertilization alters the relative importance of nitrate reduction pathways in salt marsh sediments

NASA Astrophysics Data System (ADS)

Peng, Xuefeng; Ji, Qixing; Angell, John H.; Kearns, Patrick J.; Yang, Hannah J.; Bowen, Jennifer L.; Ward, Bess B.

2016-08-01

Salt marshes provide numerous valuable ecological services. In particular, nitrogen (N) removal in salt marsh sediments alleviates N loading to the coastal ocean. N removal reduces the threat of eutrophication caused by increased N inputs from anthropogenic sources. It is unclear, however, whether chronic nutrient overenrichment alters the capacity of salt marshes to remove anthropogenic N. To assess the effect of nutrient enrichment on N cycling in salt marsh sediments, we examined important N cycle pathways in experimental fertilization plots in a New England salt marsh. We determined rates of nitrification, denitrification, and dissimilatory nitrate reduction to ammonium (DNRA) using sediment slurry incubations with 15N labeled ammonium or nitrate tracers under oxic headspace (20% oxygen/80% helium). Nitrification and denitrification rates were more than tenfold higher in fertilized plots compared to control plots. By contrast, DNRA, which retains N in the system, was high in control plots but not detected in fertilized plots. The relative contribution of DNRA to total nitrate reduction largely depends on the carbon/nitrate ratio in the sediment. These results suggest that long-term fertilization shifts N cycling in salt marsh sediments from predominantly retention to removal.

Method of Continuous Variations: Applications of Job Plots to the Study of Molecular Associations in Organometallic Chemistry[**

PubMed Central

Renny, Joseph S.; Tomasevich, Laura L.; Tallmadge, Evan H.; Collum, David B.

2014-01-01

Applications of the method of continuous variations—MCV or the Method of Job—to problems of interest to organometallic chemists are described. MCV provides qualitative and quantitative insights into the stoichiometries underlying association of m molecules of A and n molecules of B to form AmBn. Applications to complex ensembles probe associations that form metal clusters and aggregates. Job plots in which reaction rates are monitored provide relative stoichiometries in rate-limiting transition structures. In a specialized variant, ligand- or solvent-dependent reaction rates are dissected into contributions in both the ground states and transition states, which affords insights into the full reaction coordinate from a single Job plot. Gaps in the literature are identified and critiqued. PMID:24166797

The influence of organic amendments on soil aggregate stability from semiarid sites

NASA Astrophysics Data System (ADS)

Hueso Gonzalez, Paloma; Francisco Martinez Murillo, Juan; Damian Ruiz Sinoga, Jose

2016-04-01

Restoring the native vegetation is the most effective way to regenerate soil health. Under these conditions, vegetation cover in areas having degraded soils may be better sustained if the soil is amended with an external source of organic matter. The addition of organic materials to soils also increases infiltration rates and reduces erosion rates; these factors contribute to an available water increment and a successful and sustainable land management. The goal of this study was to analyze the effect of various organic amendments on the aggregate stability of soils in afforested plots. An experimental paired-plot layout was established in southern of Spain (homogeneous slope gradient: 7.5%; aspect: N170). Five amendments were applied in an experimental set of plots: straw mulching; mulch with chipped branches of Aleppo Pine (Pinus halepensis L.); TerraCotten hydroabsobent polymers; sewage sludge; sheep manure and control. Plots were afforested following the same spatial pattern, and amendments were mixed with the soil at the rate 10 Mg ha-1. The vegetation was planted in a grid pattern with 0.5 m between plants in each plot. During the afforestation process the soil was tilled to 25 cm depth from the surface. Soil from the afforested plots was sampled in: i) 6 months post-afforestation; ii) 12 months post-afforestation; iii) 18 months post-afforestation; and iv) 24 months post-afforestation. The sampling strategy for each plot involved collection of 4 disturbed soil samples taken from the surface (0-10 cm depth). The stability of aggregates was measured by wet-sieving. Regarding to soil aggregate stability, the percentage of stable aggregates has increased slightly in all the treatments in relation to control. Specifically, the differences were recorded in the fraction of macroaggregates (≥ 0.250 mm). The largest increases have been associated with straw mulch, pinus mulch and sludge. Similar results have been registered for the soil organic carbon content. Independent of the soil management, after six months, no significant differences in microaggregates were found regarding to the control plots. These results showed an increase in the stability of the macroaggregates when soil is amended with sludge, pinus mulch and straw much. This fact has been due to an increase in the number cementing agents due to: (i) the application of pinus, straw and sludge had resulted in the release of carbohydrates to the soil; and thus (ii) it has favored the development of a protective vegetation cover, which has increased the number of roots in the soil and the organic contribution to it.

GrayStar: Web-based pedagogical stellar modeling

NASA Astrophysics Data System (ADS)

Short, C. Ian

2017-01-01

GrayStar is a web-based pedagogical stellar model. It approximates stellar atmospheric and spectral line modeling in JavaScript with visualization in HTML. It is suitable for a wide range of education and public outreach levels depending on which optional plots and print-outs are turned on. All plots and renderings are pure basic HTML and the plotting module contains original HTML procedures for automatically scaling and graduating x- and y-axes.

The effect of using complete and partial forested FIA plot data on biomass and forested area classifications from MODIS satellite data

Treesearch

Dumitru Salajanu; Dennis M. Jacobs

2006-01-01

Authors’ objective was to determine at what level biomass and forest area obtained from partial and complete forested plot inventory data compares with forested area and biomass estimates from the national inventory data. A subset of 3819 inventory plots (100% forested, 100% non-forested, mixed-forest/non-forest) was used to classify the land cover and model the...

Analysis of structural dynamic data from Skylab. Volume 2: Skylab analytical and test model data

NASA Technical Reports Server (NTRS)

Demchak, L.; Harcrow, H.

1976-01-01

The orbital configuration test modal data, analytical test correlation modal data, and analytical flight configuration modal data are presented. Tables showing the generalized mass contributions (GMCs) for each of the thirty tests modes are given along with the two dimensional mode shape plots and tables of GMCs for the test correlated analytical modes. The two dimensional mode shape plots for the analytical modes and uncoupled and coupled modes of the orbital flight configuration at three development phases of the model are included.

Analysis of area level and unit level models for small area estimation in forest inventories assisted with LiDAR auxiliary information.

PubMed

Mauro, Francisco; Monleon, Vicente J; Temesgen, Hailemariam; Ford, Kevin R

2017-01-01

Forest inventories require estimates and measures of uncertainty for subpopulations such as management units. These units often times hold a small sample size, so they should be regarded as small areas. When auxiliary information is available, different small area estimation methods have been proposed to obtain reliable estimates for small areas. Unit level empirical best linear unbiased predictors (EBLUP) based on plot or grid unit level models have been studied more thoroughly than area level EBLUPs, where the modelling occurs at the management unit scale. Area level EBLUPs do not require a precise plot positioning and allow the use of variable radius plots, thus reducing fieldwork costs. However, their performance has not been examined thoroughly. We compared unit level and area level EBLUPs, using LiDAR auxiliary information collected for inventorying 98,104 ha coastal coniferous forest. Unit level models were consistently more accurate than area level EBLUPs, and area level EBLUPs were consistently more accurate than field estimates except for large management units that held a large sample. For stand density, volume, basal area, quadratic mean diameter, mean height and Lorey's height, root mean squared errors (rmses) of estimates obtained using area level EBLUPs were, on average, 1.43, 2.83, 2.09, 1.40, 1.32 and 1.64 times larger than those based on unit level estimates, respectively. Similarly, direct field estimates had rmses that were, on average, 1.37, 1.45, 1.17, 1.17, 1.26, and 1.38 times larger than rmses of area level EBLUPs. Therefore, area level models can lead to substantial gains in accuracy compared to direct estimates, and unit level models lead to very important gains in accuracy compared to area level models, potentially justifying the additional costs of obtaining accurate field plot coordinates.

Analysis of area level and unit level models for small area estimation in forest inventories assisted with LiDAR auxiliary information

PubMed Central

Monleon, Vicente J.; Temesgen, Hailemariam; Ford, Kevin R.

2017-01-01

Forest inventories require estimates and measures of uncertainty for subpopulations such as management units. These units often times hold a small sample size, so they should be regarded as small areas. When auxiliary information is available, different small area estimation methods have been proposed to obtain reliable estimates for small areas. Unit level empirical best linear unbiased predictors (EBLUP) based on plot or grid unit level models have been studied more thoroughly than area level EBLUPs, where the modelling occurs at the management unit scale. Area level EBLUPs do not require a precise plot positioning and allow the use of variable radius plots, thus reducing fieldwork costs. However, their performance has not been examined thoroughly. We compared unit level and area level EBLUPs, using LiDAR auxiliary information collected for inventorying 98,104 ha coastal coniferous forest. Unit level models were consistently more accurate than area level EBLUPs, and area level EBLUPs were consistently more accurate than field estimates except for large management units that held a large sample. For stand density, volume, basal area, quadratic mean diameter, mean height and Lorey’s height, root mean squared errors (rmses) of estimates obtained using area level EBLUPs were, on average, 1.43, 2.83, 2.09, 1.40, 1.32 and 1.64 times larger than those based on unit level estimates, respectively. Similarly, direct field estimates had rmses that were, on average, 1.37, 1.45, 1.17, 1.17, 1.26, and 1.38 times larger than rmses of area level EBLUPs. Therefore, area level models can lead to substantial gains in accuracy compared to direct estimates, and unit level models lead to very important gains in accuracy compared to area level models, potentially justifying the additional costs of obtaining accurate field plot coordinates. PMID:29216290

Study of the effectiveness of several tree canopy types on roadside green belt in influencing the distribution of NO2 gas emitted from transportation

NASA Astrophysics Data System (ADS)

Desyana, R. D.; Sulistyantara, B.; Nasrullah, N.; Fatimah, I. S.

2017-03-01

Transportation is one significant factor which contributes to urban air pollution. One of the pollutants emitted from transportation which affect human’s health is NO2. Plants, especially trees, have high potential in reducing air pollutants from transportation through diffusion, absorbtion, adsorption and deposition. Purpose of this study was to analyze the effectiveness of several tree canopy types on roadside green belt in influencing distribution of NO2 gas emitted from transportation. The study conducted in three plots of tree canopy in Jagorawi Highway: Bungur (Lagerstroemia speciosa), Gmelina (Gmelina arborea) and Tanjung (Mimusops elengi). The tree canopy ability in absorbing pollutant is derived by comparing air quality on vegetated area with ambience air quality at control area (open field). Air sampling was conducted to measure NO2 concentration at elevation 1.5m, 5m and 10m at distance 0m, 10m and 30m, using Air Sampler Impinger. Concentration of NO2 was analyzed with Griess-Saltzman method. From this research, the result of ANOVA showed that tree plot (vegetated area) affected significantly to NO2 concentration. However the effect of distance from road and elevation was not significant. Among the plots, the highest NO2 concentration was found on Control plot (area without tree canopy), while the lowest NO2 concentration was found in Tanjung plot. Tanjung plot with round shape and high density canopy performed better in reducing NO2 than Bungur plot with round shape and medium density canopy, regardless the sampling elevation and distance. Gmelina plot performed the best in reducing horizontal distribution of NO2 concentration at elevation 1.5 and 5m, but the result at elevation 10m was not significant.

Remeasured FIA plots reveal tree-level diameter growth and tree mortality impacts of nitrogen deposition on California’s forests

Treesearch

Mark E. Fenn; Jeremy S. Fried; Haiganoush K. Preisler; Andrzej Bytnerowicz; Susan Schilling; Sarah Jovan; Olaf Kuegler

2015-01-01

The air in California’s forests spans a broad range of purity, from virtually no locally generated pollutants to highly elevated levels of pollutants in forests downwind of urban and agricultural source areas. Ten-year remeasurement data from Forest Inventory and Analysis (FIA) plots in California were used in combination with modelled atmospheric nitrogen (N)...

Plant moisture stress patterns in planted Douglas-fir: a preliminary study of the effects of crown and aspect

Treesearch

James L. Lindquist

1977-01-01

Plant moisture stress (PMS) regimes over the summer were determined in planted Douglas-fir seedlings in clearcut and partial-cut blocks on the south slope clearcut, PMS reaches levels that after June could seriously reduce seedling growth. The PMS of the clearcut plots exceed 15 atmospheres at midmorning in June, but partial-cut plots do not exceed this level until...

Effects of chronic low-level N additions on foliar elemental concentrations, morphology, and gas exchange of mature montane red spruce

Treesearch

Paul G. Schaberg; Timothy D. Perkins; Steven G. McNulty

1997-01-01

We evaluated the influence of protracted low-level nitrogen (N) fertilization on 29 morphological, physiological, or chemical parameters measured on mature red spruce (Picea rubens Sarg.) growing within 10 study plots on Mount Ascutney, Vermont. For 8 consecutive years prior to this study, each plot received one of five treatments: 0, 15.7, 19.8, 25....

NASADIG - NASA DEVICE INDEPENDENT GRAPHICS LIBRARY (AMDAHL VERSION)

NASA Technical Reports Server (NTRS)

Rogers, J. E.

1994-01-01

The NASA Device Independent Graphics Library, NASADIG, can be used with many computer-based engineering and management applications. The library gives the user the opportunity to translate data into effective graphic displays for presentation. The software offers many features which allow the user flexibility in creating graphics. These include two-dimensional plots, subplot projections in 3D-space, surface contour line plots, and surface contour color-shaded plots. Routines for three-dimensional plotting, wireframe surface plots, surface plots with hidden line removal, and surface contour line plots are provided. Other features include polar and spherical coordinate plotting, world map plotting utilizing either cylindrical equidistant or Lambert equal area projection, plot translation, plot rotation, plot blowup, splines and polynomial interpolation, area blanking control, multiple log/linear axes, legends and text control, curve thickness control, and multiple text fonts (18 regular, 4 bold). NASADIG contains several groups of subroutines. Included are subroutines for plot area and axis definition; text set-up and display; area blanking; line style set-up, interpolation, and plotting; color shading and pattern control; legend, text block, and character control; device initialization; mixed alphabets setting; and other useful functions. The usefulness of many routines is dependent on the prior definition of basic parameters. The program's control structure uses a serial-level construct with each routine restricted for activation at some prescribed level(s) of problem definition. NASADIG provides the following output device drivers: Selanar 100XL, VECTOR Move/Draw ASCII and PostScript files, Tektronix 40xx, 41xx, and 4510 Rasterizer, DEC VT-240 (4014 mode), IBM AT/PC compatible with SmartTerm 240 emulator, HP Lasergrafix Film Recorder, QMS 800/1200, DEC LN03+ Laserprinters, and HP LaserJet (Series III). NASADIG is written in FORTRAN and is available for several platforms. NASADIG 5.7 is available for DEC VAX series computers running VMS 5.0 or later (MSC-21801), Cray X-MP and Y-MP series computers running UNICOS (COS-10049), and Amdahl 5990 mainframe computers running UTS (COS-10050). NASADIG 5.1 is available for UNIX-based operating systems (MSC-22001). The UNIX version has been successfully implemented on Sun4 series computers running SunOS, SGI IRIS computers running IRIX, Hewlett Packard 9000 computers running HP-UX, and Convex computers running Convex OS (MSC-22001). The standard distribution medium for MSC-21801 is a set of two 6250 BPI 9-track magnetic tapes in DEC VAX BACKUP format. It is also available on a set of two TK50 tape cartridges in DEC VAX BACKUP format. The standard distribution medium for COS-10049 and COS-10050 is a 6250 BPI 9-track magnetic tape in UNIX tar format. Other distribution media and formats may be available upon request. The standard distribution medium for MSC-22001 is a .25 inch streaming magnetic tape cartridge (Sun QIC-24) in UNIX tar format. Alternate distribution media and formats are available upon request. With minor modification, the UNIX source code can be ported to other platforms including IBM PC/AT series computers and compatibles. NASADIG is also available bundled with TRASYS, the Thermal Radiation Analysis System (COS-10026, DEC VAX version; COS-10040, CRAY version).

NASADIG - NASA DEVICE INDEPENDENT GRAPHICS LIBRARY (UNIX VERSION)

NASA Technical Reports Server (NTRS)

Rogers, J. E.

1994-01-01

The NASA Device Independent Graphics Library, NASADIG, can be used with many computer-based engineering and management applications. The library gives the user the opportunity to translate data into effective graphic displays for presentation. The software offers many features which allow the user flexibility in creating graphics. These include two-dimensional plots, subplot projections in 3D-space, surface contour line plots, and surface contour color-shaded plots. Routines for three-dimensional plotting, wireframe surface plots, surface plots with hidden line removal, and surface contour line plots are provided. Other features include polar and spherical coordinate plotting, world map plotting utilizing either cylindrical equidistant or Lambert equal area projection, plot translation, plot rotation, plot blowup, splines and polynomial interpolation, area blanking control, multiple log/linear axes, legends and text control, curve thickness control, and multiple text fonts (18 regular, 4 bold). NASADIG contains several groups of subroutines. Included are subroutines for plot area and axis definition; text set-up and display; area blanking; line style set-up, interpolation, and plotting; color shading and pattern control; legend, text block, and character control; device initialization; mixed alphabets setting; and other useful functions. The usefulness of many routines is dependent on the prior definition of basic parameters. The program's control structure uses a serial-level construct with each routine restricted for activation at some prescribed level(s) of problem definition. NASADIG provides the following output device drivers: Selanar 100XL, VECTOR Move/Draw ASCII and PostScript files, Tektronix 40xx, 41xx, and 4510 Rasterizer, DEC VT-240 (4014 mode), IBM AT/PC compatible with SmartTerm 240 emulator, HP Lasergrafix Film Recorder, QMS 800/1200, DEC LN03+ Laserprinters, and HP LaserJet (Series III). NASADIG is written in FORTRAN and is available for several platforms. NASADIG 5.7 is available for DEC VAX series computers running VMS 5.0 or later (MSC-21801), Cray X-MP and Y-MP series computers running UNICOS (COS-10049), and Amdahl 5990 mainframe computers running UTS (COS-10050). NASADIG 5.1 is available for UNIX-based operating systems (MSC-22001). The UNIX version has been successfully implemented on Sun4 series computers running SunOS, SGI IRIS computers running IRIX, Hewlett Packard 9000 computers running HP-UX, and Convex computers running Convex OS (MSC-22001). The standard distribution medium for MSC-21801 is a set of two 6250 BPI 9-track magnetic tapes in DEC VAX BACKUP format. It is also available on a set of two TK50 tape cartridges in DEC VAX BACKUP format. The standard distribution medium for COS-10049 and COS-10050 is a 6250 BPI 9-track magnetic tape in UNIX tar format. Other distribution media and formats may be available upon request. The standard distribution medium for MSC-22001 is a .25 inch streaming magnetic tape cartridge (Sun QIC-24) in UNIX tar format. Alternate distribution media and formats are available upon request. With minor modification, the UNIX source code can be ported to other platforms including IBM PC/AT series computers and compatibles. NASADIG is also available bundled with TRASYS, the Thermal Radiation Analysis System (COS-10026, DEC VAX version; COS-10040, CRAY version).

Oregon transect: Comparison of leaf-level reflectance with canopy-level and modelled reflectance

NASA Technical Reports Server (NTRS)

Johnson, Lee F.; Baret, Frederic; Peterson, David L.

1992-01-01

The Oregon Transect Ecosystem Research (OTTER) project involves the collection of a variety of remotely-sensed and in situ measurements for characterization of forest biophysical and biochemical parameters. The project includes nine study plots located along an environmental gradient in west-central Oregon, extending from the Pacific coast inland approximately 300km. These plots represent a broad range in ecosystem structure and function. Within the OTTER project, the sensitivity of the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS) signal to absorption by foliar biochemicals is being examined. AVIRIS data were acquired over all plots in conjunction with the four OTTER Multi-sensor Aircraft Campaigns spanning the growing season. Foilage samples were gathered during each campaign for biochemical determination (at Ames Research Center), to estimate stand-level constituency at each plot. Directional-hemispheric leaf reflectance throughout the 400-2400nm region was measured in the laboratory as an aid to interpreting concurrent AVIRIS data. Obtaining leaf spectra in this manner reduces or eliminates the confounding influences of atmosphere, canopy architecture, and reflectance by woody components, understory, and exposed soils which are present in airborne observations. These laboratory spectra were compared to simulated spectra derived by inverting the PROSPECT leaf-level canopy reflectance derived from AVIRIS data by use of the LOWTRAN-7 atmospheric radiative-transfer model.

[Effect of comprehensive control and prevention for chronic disease in demonstration plot of Chongqing].

PubMed

Qi, Li; Ding, Xian-bin; Mao, De-qiang; Feng, Lian-gui; Wang, Yu-lin; Jiao, Yan; Zhang, Chun-hua; Lü, Xiao-yan; Li, Hong; Xia, Yi-yin

2013-03-01

To evaluate the effect of comprehensive control and prevention for chronic diseases in demonstration plot of Chongqing. Residents were enrolled through multi-stage stratified random sampling method from 17 districts or counties which had successfully established demonstration plots and 21 districts or counties which had not established demonstration plots (non-demonstration plot for short) yet on May, 2012. Questionnaire was designed to survey awareness of health knowledge, health behaviors and utilization of health supportive tools. The results were analyzed by SPSS 15.0 software. We investigated 15 108 residents, 6156 of which were in demonstration plot and others (8951) were not. The findings revealed the percentage of the people who were aware the national action of health lifestyle in demonstration plot and in non-demonstration plot were 44.4% (2734/6157) and 40.2% (3598/8951), respectively, and the awareness of the hypertension risk of too much sodium were 72.4% (4458/6156) and 67.5% (6042/8951), respectively, and the awareness of the cardinal vascular disease (CVD) risk of obesity and overweight were 77.2% (4753/6157) and 69.6% (6230/8951), respectively. About the residents' health behaviors in demonstration plot and in non-demonstration plot, the utilization rates of salt restriction scoop or pot were 23.5% (1447/6157) and 17.9% (1602/8951), and the utilization rates of oil restriction pot were 16.7% (1028/6157) and 11.8% (1064/8951), respectively. Totally, 33 of the 37 indexes were shown higher in demonstration plot than that in non-demonstration plot (P < 0.05). The chronic diseases comprehensive control and prevention in demonstration plot was more effective, and the remarkable improvement of health knowledge and behaviors level had been achieved in demonstration plot.

Comparative evolutionary diversity and phylogenetic structure across multiple forest dynamics plots: a mega-phylogeny approach

PubMed Central

Erickson, David L.; Jones, Frank A.; Swenson, Nathan G.; Pei, Nancai; Bourg, Norman A.; Chen, Wenna; Davies, Stuart J.; Ge, Xue-jun; Hao, Zhanqing; Howe, Robert W.; Huang, Chun-Lin; Larson, Andrew J.; Lum, Shawn K. Y.; Lutz, James A.; Ma, Keping; Meegaskumbura, Madhava; Mi, Xiangcheng; Parker, John D.; Fang-Sun, I.; Wright, S. Joseph; Wolf, Amy T.; Ye, W.; Xing, Dingliang; Zimmerman, Jess K.; Kress, W. John

2014-01-01

Forest dynamics plots, which now span longitudes, latitudes, and habitat types across the globe, offer unparalleled insights into the ecological and evolutionary processes that determine how species are assembled into communities. Understanding phylogenetic relationships among species in a community has become an important component of assessing assembly processes. However, the application of evolutionary information to questions in community ecology has been limited in large part by the lack of accurate estimates of phylogenetic relationships among individual species found within communities, and is particularly limiting in comparisons between communities. Therefore, streamlining and maximizing the information content of these community phylogenies is a priority. To test the viability and advantage of a multi-community phylogeny, we constructed a multi-plot mega-phylogeny of 1347 species of trees across 15 forest dynamics plots in the ForestGEO network using DNA barcode sequence data (rbcL, matK, and psbA-trnH) and compared community phylogenies for each individual plot with respect to support for topology and branch lengths, which affect evolutionary inference of community processes. The levels of taxonomic differentiation across the phylogeny were examined by quantifying the frequency of resolved nodes throughout. In addition, three phylogenetic distance (PD) metrics that are commonly used to infer assembly processes were estimated for each plot [PD, Mean Phylogenetic Distance (MPD), and Mean Nearest Taxon Distance (MNTD)]. Lastly, we examine the partitioning of phylogenetic diversity among community plots through quantification of inter-community MPD and MNTD. Overall, evolutionary relationships were highly resolved across the DNA barcode-based mega-phylogeny, and phylogenetic resolution for each community plot was improved when estimated within the context of the mega-phylogeny. Likewise, when compared with phylogenies for individual plots, estimates of phylogenetic diversity in the mega-phylogeny were more consistent, thereby removing a potential source of bias at the plot-level, and demonstrating the value of assessing phylogenetic relationships simultaneously within a mega-phylogeny. An unexpected result of the comparisons among plots based on the mega-phylogeny was that the communities in the ForestGEO plots in general appear to be assemblages of more closely related species than expected by chance, and that differentiation among communities is very low, suggesting deep floristic connections among communities and new avenues for future analyses in community ecology. PMID:25414723

Tree cover at fine and coarse spatial grains interacts with shade tolerance to shape plant species distributions across the Alps

PubMed Central

Nieto-Lugilde, Diego; Lenoir, Jonathan; Abdulhak, Sylvain; Aeschimann, David; Dullinger, Stefan; Gégout, Jean-Claude; Guisan, Antoine; Pauli, Harald; Renaud, Julien; Theurillat, Jean-Paul; Thuiller, Wilfried; Van Es, Jérémie; Vittoz, Pascal; Willner, Wolfgang; Wohlgemuth, Thomas; Zimmermann, Niklaus E.; Svenning, Jens-Christian

2015-01-01

The role of competition for light among plants has long been recognised at local scales, but its importance for plant species distributions at larger spatial scales has generally been ignored. Tree cover modifies the local abiotic conditions below the canopy, notably by reducing light availability, and thus, also the performance of species that are not adapted to low-light conditions. However, this local effect may propagate to coarser spatial grains, by affecting colonisation probabilities and local extinction risks of herbs and shrubs. To assess the effect of tree cover at both the plot- and landscape-grain sizes (approximately 10-m and 1-km), we fit Generalised Linear Models (GLMs) for the plot-level distributions of 960 species of herbs and shrubs using 6,935 vegetation plots across the European Alps. We ran four models with different combinations of variables (climate, soil and tree cover) at both spatial grains for each species. We used partial regressions to evaluate the independent effects of plot- and landscape-grain tree cover on plot-level plant communities. Finally, the effects on species-specific elevational range limits were assessed by simulating a removal experiment comparing the species distributions under high and low tree cover. Accounting for tree cover improved the model performance, with the probability of the presence of shade-tolerant species increasing with increasing tree cover, whereas shade-intolerant species showed the opposite pattern. The tree cover effect occurred consistently at both the plot and landscape spatial grains, albeit most strongly at the former. Importantly, tree cover at the two grain sizes had partially independent effects on plot-level plant communities. With high tree cover, shade-intolerant species exhibited narrower elevational ranges than with low tree cover whereas shade-tolerant species showed wider elevational ranges at both limits. These findings suggest that forecasts of climate-related range shifts for herb and shrub species may be modified by tree cover dynamics. PMID:26290621

Equations for Automotive-Transmission Performance

NASA Technical Reports Server (NTRS)

Chazanoff, S.; Aston, M. B.; Chapman, C. P.

1984-01-01

Curve-fitting procedure ensures high confidence levels. Threedimensional plot represents performance of small automatic transmission coasting in second gear. In equation for plot, PL power loss, S speed and T torque. Equations applicable to manual and automatic transmissions over wide range of speed, torque, and efficiency.

Air Data - Tile Plot

EPA Pesticide Factsheets

This tool plots daily AQI values for a specific location and time period. Each square or “tile” represents one day of the year and is color-coded based on the AQI level for that day. The legend tallies the number of days in each AQI category.

Experimental restoration of coppice-with-standards: Response of understorey vegetation from the conservation perspective.

PubMed

Vild, Ondřej; Roleček, Jan; Hédl, Radim; Kopecký, Martin; Utinek, Dušan

2013-12-15

A substantial part of European lowland woodlands was managed as coppices or wood pastures for millennia. However, traditional management forms were almost completely abandoned in Central Europe by the middle of the 20th century. Combined with the effects of nitrogen deposition and herbivore pressure, shifts in management resulted in biodiversity loss affecting particularly light-demanding oligotrophic plant species. Experimental thinning was applied in a former oak coppice-with-standards in an attempt to restore vanishing understorey plant communities. Two levels of thinning intensity and zero management as control were used on 90 plots. Ten years after the treatment, significant changes in species composition and diversity were observed in heavily thinned plots, while moderate thinning had mostly insignificant effects. Light-demanding oligotrophic species significantly increased, indicating positive consequences of restoration. However, heavy thinning also brought about the expansion of native ruderal species. Alien species remained unchanged. We conclude that the restoration of coppice-with-standards can be an efficient tool to support vanishing light-demanding woodland species. Combined with biodiversity benefits, the increasing demand for biofuel may contribute to the renaissance of traditional management forms in forestry.

Potential effects of vinasse as a soil amendment to control runoff and soil loss

NASA Astrophysics Data System (ADS)

Hazbavi, Z.; Sadeghi, S. H. R.

2016-02-01

Application of organic materials are well known as environmental practices in soil restoration, preserving soil organic matter and recovering degraded soils of arid and semiarid lands. Therefore, the present research focused on evaluating the effectiveness of vinasse, a byproduct mainly of the sugar-ethanol industry, on soil conservation under simulated rainfall. Vinasse can be recycled as a soil amendment due to its organic matter content. Accordingly, the laboratory experiments were conducted by using 0.25 m2 experimental plots at 20 % slope and rainfall intensity of 72 mm h-1 with 0.5 h duration. The effect of vinasse was investigated on runoff and soil loss control. Experiments were set up as a control (with no amendment) and three treated plots with doses of 0.5, 1, and 1.5 L m-2 of vinasse subjected to simulated rainfall. Laboratory results indicated that vinasse at different levels could not significantly (P > 0.05) decrease the runoff amount and soil loss rate in the study plots compared to untreated plots. The average amounts of minimum runoff volume and soil loss were about 3985 mL and 46 g for the study plot at a 1 L m-2 level of vinasse application.

Tools to Compare Diving-Animal Kinematics With Acoustic Behavior and Exposure

DTIC Science & Technology

2009-09-30

the level of detail that is required. Figure 2. Left: The acoustic spectrogram from a beaked whale foraging at 967m depth revealing clicks and...buzzes. Data courtesy of Brandon Southall. Right: The typical acoustic signature of a lunging humback feeding on krill. The overlaid plot shows speed...other characteristics . 3 Figure 3. Left: A trackPlot image of a Florida Manatee. The insert shows one of the plot options based on a fourier

Van Allen Probes Science Gateway: A Centralized Data Access Point

NASA Astrophysics Data System (ADS)

Romeo, G.; Barnes, R. J.; Ukhorskiy, A. Y.; Sotirelis, T.; Stephens, G. K.; Kessel, R.; Potter, M.

2015-12-01

The Van Allen Probes Science Gateway acts a centralized interface to the instrument Science Operation Centers (SOCs), provides mission planning tools, and hosts a number of science related activities such as the mission bibliography. Most importantly, the Gateway acts as the primary site for processing and delivering the Van Allen Probes Space Weather data to users. Over the past years, the web-site has been completely redesigned with the focus on easier navigation and improvements of the existing tools such as the orbit plotter, position calculator and magnetic footprint tool. In addition, a new data plotting facility has been added. Based on HTML5, which allows users to interactively plot Van Allen Probes science and space weather data. The user can tailor the tool to display exactly the plot they wish to see and then share this with other users via either a URL or by QR code. Various types of plots can be created, including, simple time series, data plotted as a function of orbital location, and time versus L-Shell, capability of visualizing data from both probes (A & B) on the same plot. In cooperation with all Van Allen Probes Instrument SOCs, the Science Gateway will soon be able to serve higher level data products (Level 3), and to visualize them via the above mentioned HTML5 interface. Users will also be able to create customized CDF files on the fly.

Automated matching of multiple terrestrial laser scans for stem mapping without the use of artificial references

NASA Astrophysics Data System (ADS)

Liu, Jingbin; Liang, Xinlian; Hyyppä, Juha; Yu, Xiaowei; Lehtomäki, Matti; Pyörälä, Jiri; Zhu, Lingli; Wang, Yunsheng; Chen, Ruizhi

2017-04-01

Terrestrial laser scanning has been widely used to analyze the 3D structure of a forest in detail and to generate data at the level of a reference plot for forest inventories without destructive measurements. Multi-scan terrestrial laser scanning is more commonly applied to collect plot-level data so that all of the stems can be detected and analyzed. However, it is necessary to match the point clouds of multiple scans to yield a point cloud with automated processing. Mismatches between datasets will lead to errors during the processing of multi-scan data. Classic registration methods based on flat surfaces cannot be directly applied in forest environments; therefore, artificial reference objects have conventionally been used to assist with scan matching. The use of artificial references requires additional labor and expertise, as well as greatly increasing the cost. In this study, we present an automated processing method for plot-level stem mapping that matches multiple scans without artificial references. In contrast to previous studies, the registration method developed in this study exploits the natural geometric characteristics among a set of tree stems in a plot and combines the point clouds of multiple scans into a unified coordinate system. Integrating multiple scans improves the overall performance of stem mapping in terms of the correctness of tree detection, as well as the bias and the root-mean-square errors of forest attributes such as diameter at breast height and tree height. In addition, the automated processing method makes stem mapping more reliable and consistent among plots, reduces the costs associated with plot-based stem mapping, and enhances the efficiency.

Runoff and erosion response of simulated waste burial covers in a semi-arid environment

USGS Publications Warehouse

Bent, G.C.; Goff, B.F.; Rightmire, K.G.; Sidle, R.C.

1999-01-01

Control of runoff (reducing infiltration) and erosion at shallow land burials is necessary in order to assure environmentally safe disposal of low-level radioactive-waste and other waste products. This study evaluated the runoff and erosion response of two perennial grass species on simulated waste burial covers at Idaho National Engineering and Environmental Laboratory (INEEL). Rainfall simulations were applied to three plots covered by crested wheatgrass [Agropyron desertorum (Fischer ex Link) Shultes], three plots covered by streambank wheatgrass [Elymus lanceolatus (Scribner and Smith) Gould spp. lanceolatus], and one bare plot. Average total runoff for rainfall simulations in 1987, 1989, and 1990 was 42 percent greater on streambank wheatgrass plots than on crested wheatgrass plots. Average total soil loss for rainfall simulations in 1987 and 1990 was 105 percent greater on streambank wheatgrass plots than on crested wheatgrass plots. Total runoff and soil loss from natural rainfall and snowmelt events during 1987 were 25 and 105 percent greater, respectively, on streambank wheatgrass plots than on crested wheatgrass plots. Thus, crested wheatgrass appears to be better suited in revegetation of waste burial covers at INEEL than streambank wheatgrass due to its much lower erosion rate and only slightly higher infiltration rate (lower runoff rate).

Phylogenetic diversity of plants alters the effect of species richness on invertebrate herbivory

PubMed Central

2013-01-01

Long-standing ecological theory proposes that diverse communities of plants should experience a decrease in herbivory. Yet previous empirical examinations of this hypothesis have revealed that plant species richness increases herbivory in just as many systems as it decreases it. In this study, I ask whether more insight into the role of plant diversity in promoting or suppressing herbivory can be gained by incorporating information about the evolutionary history of species in a community. In an old field system in southern Ontario, I surveyed communities of plants and measured levels of leaf damage on 27 species in 38 plots. I calculated a measure of phylogenetic diversity (PSE) that encapsulates information about the amount of evolutionary history represented in each of the plots and looked for a relationship between levels of herbivory and both species richness and phylogenetic diversity using a generalized linear mixed model (GLMM) that could account for variation in herbivory levels between species. I found that species richness was positively associated with herbivore damage at the plot-level, in keeping with the results from several other recent studies on this question. On the other hand, phylogenetic diversity was associated with decreased herbivory. Importantly, there was also an interaction between species richness and phylogenetic diversity, such that plots with the highest levels of herbivory were plots which had many species but only if those species tended to be closely related to one another. I propose that these results are the consequence of interactions with herbivores whose diets are phylogenetically specialized (for which I introduce the term cladophage), and how phylogenetic diversity may alter their realized host ranges. These results suggest that incorporating a phylogenetic perspective can add valuable additional insight into the role of plant diversity in explaining or predicting levels of herbivory at a whole-community scale. PMID:23825795

Unintended consequences of invasive predator control in an Australian forest: overabundant wallabies and vegetation change.

PubMed

Dexter, Nick; Hudson, Matt; James, Stuart; Macgregor, Christopher; Lindenmayer, David B

2013-01-01

Over-abundance of native herbivores is a problem in many forests worldwide. The abundance of native macropod wallabies is extremely high at Booderee National Park (BNP) in south-eastern Australia. This has occurred because of the reduction of exotic predators through an intensive baiting program, coupled with the absence of other predators. The high density of wallabies at BNP may be inhibiting the recruitment of many plant species following fire-induced recruitment events. We experimentally examined the post-fire response of a range of plant species to browsing by wallabies in a forest heavily infested with the invasive species, bitou bush Chrysanthemoides monilifera. We recorded the abundance and size of a range of plant species in 18 unfenced (browsed) and 16 fenced (unbrowsed) plots. We found the abundance and size of bitou bush was suppressed in browsed plots compared to unbrowsed plots. Regenerating seedlings of the canopy or middle storey tree species Eucalyptus pilularis, Acacia implexa, Allocasuarina littoralis, Breynia oblongifolia and Banksia integrifolia were either smaller or fewer in number in grazed plots than treatment plots as were the vines Kennedia rubicunda, Glycine tabacina and Glycine clandestina. In contrast, the understorey fern, Pteridium esculentum increased in abundance in the browsed plots relative to unbrowsed plots probably because of reduced competition with more palatable angiosperms. Twelve months after plots were installed the community structure of the browsed and unbrowsed plots was significantly different (P = 0.023, Global R = 0.091). The relative abundance of C. monilifera and P. esculentum contributed most to the differences. We discuss the possible development of a low diversity bracken fern parkland in Booderee National Park through a trophic cascade, similar to that caused by overabundant deer in the northern hemisphere. We also discuss its implications for broad scale fox control in southern Australian forests.

Assessing evidence for a pervasive alteration in tropical tree communities.

PubMed

Chave, Jérôme; Condit, Richard; Muller-Landau, Helene C; Thomas, Sean C; Ashton, Peter S; Bunyavejchewin, Sarayudh; Co, Leonardo L; Dattaraja, Handanakere S; Davies, Stuart J; Esufali, Shameema; Ewango, Corneille E N; Feeley, Kenneth J; Foster, Robin B; Gunatilleke, Nimal; Gunatilleke, Savitri; Hall, Pamela; Hart, Terese B; Hernández, Consuelo; Hubbell, Stephen P; Itoh, Akira; Kiratiprayoon, Somboon; Lafrankie, James V; Loo de Lao, Suzanne; Makana, Jean-Rémy; Noor, Md Nur Supardi; Kassim, Abdul Rahman; Samper, Cristián; Sukumar, Raman; Suresh, Hebbalalu S; Tan, Sylvester; Thompson, Jill; Tongco, Ma Dolores C; Valencia, Renato; Vallejo, Martha; Villa, Gorky; Yamakura, Takuo; Zimmerman, Jess K; Losos, Elizabeth C

2008-03-04

In Amazonian tropical forests, recent studies have reported increases in aboveground biomass and in primary productivity, as well as shifts in plant species composition favouring fast-growing species over slow-growing ones. This pervasive alteration of mature tropical forests was attributed to global environmental change, such as an increase in atmospheric CO2 concentration, nutrient deposition, temperature, drought frequency, and/or irradiance. We used standardized, repeated measurements of over 2 million trees in ten large (16-52 ha each) forest plots on three continents to evaluate the generality of these findings across tropical forests. Aboveground biomass increased at seven of our ten plots, significantly so at four plots, and showed a large decrease at a single plot. Carbon accumulation pooled across sites was significant (+0.24 MgC ha(-1) y(-1), 95% confidence intervals [0.07, 0.39] MgC ha(-1) y(-1)), but lower than reported previously for Amazonia. At three sites for which we had data for multiple census intervals, we found no concerted increase in biomass gain, in conflict with the increased productivity hypothesis. Over all ten plots, the fastest-growing quartile of species gained biomass (+0.33 [0.09, 0.55] % y(-1)) compared with the tree community as a whole (+0.15 % y(-1)); however, this significant trend was due to a single plot. Biomass of slow-growing species increased significantly when calculated over all plots (+0.21 [0.02, 0.37] % y(-1)), and in half of our plots when calculated individually. Our results do not support the hypothesis that fast-growing species are consistently increasing in dominance in tropical tree communities. Instead, they suggest that our plots may be simultaneously recovering from past disturbances and affected by changes in resource availability. More long-term studies are necessary to clarify the contribution of global change to the functioning of tropical forests.

Unintended Consequences of Invasive Predator Control in an Australian Forest: Overabundant Wallabies and Vegetation Change

PubMed Central

Dexter, Nick; Hudson, Matt; James, Stuart; MacGregor, Christopher; Lindenmayer, David B.

2013-01-01

Over-abundance of native herbivores is a problem in many forests worldwide. The abundance of native macropod wallabies is extremely high at Booderee National Park (BNP) in south-eastern Australia. This has occurred because of the reduction of exotic predators through an intensive baiting program, coupled with the absence of other predators. The high density of wallabies at BNP may be inhibiting the recruitment of many plant species following fire-induced recruitment events. We experimentally examined the post-fire response of a range of plant species to browsing by wallabies in a forest heavily infested with the invasive species, bitou bush Chrysanthemoides monilifera. We recorded the abundance and size of a range of plant species in 18 unfenced (browsed) and 16 fenced (unbrowsed) plots. We found the abundance and size of bitou bush was suppressed in browsed plots compared to unbrowsed plots. Regenerating seedlings of the canopy or middle storey tree species Eucalyptus pilularis, Acacia implexa, Allocasuarina littoralis, Breynia oblongifolia and Banksia integrifolia were either smaller or fewer in number in grazed plots than treatment plots as were the vines Kennedia rubicunda, Glycine tabacina and Glycine clandestina. In contrast, the understorey fern, Pteridium esculentum increased in abundance in the browsed plots relative to unbrowsed plots probably because of reduced competition with more palatable angiosperms. Twelve months after plots were installed the community structure of the browsed and unbrowsed plots was significantly different (P = 0.023, Global R = 0.091). The relative abundance of C. monilifera and P. esculentum contributed most to the differences. We discuss the possible development of a low diversity bracken fern parkland in Booderee National Park through a trophic cascade, similar to that caused by overabundant deer in the northern hemisphere. We also discuss its implications for broad scale fox control in southern Australian forests. PMID:23990879

Tree-level imputation techniques to estimate current plot-level attributes in the Pacific Northwest using paneled inventory data

Treesearch

Bianca Eskelson; Temesgen Hailemariam; Tara Barrett

2009-01-01

The Forest Inventory and Analysis program (FIA) of the US Forest Service conducts a nationwide annual inventory. One panel (20% or 10% of all plots in the eastern and western United States, respectively) is measured each year. The precision of the estimates for any given year from one panel is low, and the moving average (MA), which is considered to be the default...

Temperature factors effect on occurrence of stress corrosion cracking of main gas pipeline

NASA Astrophysics Data System (ADS)

Nazarova, M. N.; Akhmetov, R. R.; Krainov, S. A.

2017-10-01

The purpose of the article is to analyze and compare the data in order to contribute to the formation of an objective opinion on the issue of the growth of stress corrosion defects of the main gas pipeline. According to available data, a histogram of the dependence of defects due to stress corrosion on the distance from the compressor station was constructed, and graphs of the dependence of the accident density due to stress corrosion in the winter and summer were also plotted. Data on activation energy were collected and analyzed in which occurrence of stress corrosion is most likely constructed, a plot of activation energy versus temperature is plotted, and the process of occurrence of stress corrosion by the example of two different grades of steels under the action of different temperatures was analyzed.

F-15 inlet/engine test techniques and distortion methodologies studies. Volume 2: Time variant data quality analysis plots

NASA Technical Reports Server (NTRS)

Stevens, C. H.; Spong, E. D.; Hammock, M. S.

1978-01-01

Time variant data quality analysis plots were used to determine if peak distortion data taken from a subscale inlet model can be used to predict peak distortion levels for a full scale flight test vehicle.

Ecological effects of the harvest phase of geoduck clam (Panopea generosa Gould, 1850) aquaculture on infaunal communities in southern Puget Sound, Washington USA.

USGS Publications Warehouse

VanBlaricom, Glenn R.; Eccles, Jennifer L.; Olden, Julian D.; Mcdonald, P. Sean

2015-01-01

Intertidal aquaculture for geoducks (Panopea generosa Gould, 1850) is expanding in southern Puget Sound, Washington, where gently sloping sandy beaches are used for field culture. Geoduck aquaculture contributes significantly to the regional economy, but has become controversial because of a range of unresolved questions involving potential biological impacts on marine ecosystems. From 2008 through 2012, the authors used a “before-after-control-impact” experimental design, emphasizing spatial scales comparable with those used by geoduck culturists to evaluate the effects of harvesting market-ready geoducks on associated benthic infaunal communities. Infauna were sampled at three different study locations in southern Puget Sound at monthly intervals before, during, and after harvests of clams, and along extralimital transects extending away from the edges of cultured plots to assess the effects of harvest activities in adjacent uncultured habitat. Using multivariate statistical approaches, strong seasonal and spatial signals in patterns of abundance were found, but there was scant evidence of effects on the community structure associated with geoduck harvest disturbances within cultured plots. Likewise, no indications of significant “spillover” effects of harvest on uncultured habitat adjacent to cultured plots were noted. Complementary univariate approaches revealed little evidence of harvest effects on infaunal biodiversity and indications of modest effects on populations of individual infaunal taxa. Of 10 common taxa analyzed, only three showed evidence of reduced densities, although minor, after harvests whereas the remaining seven taxa indicated either neutral responses to harvest disturbances or increased abundance either during or in the months after harvest events. It is suggested that a relatively active natural disturbance regime, including both small-scale and large-scale events that occur with comparable intensity but more frequently than geoduck harvest events in cultured plots, has facilitated assemblage-level infaunal resistance and resilience to harvest disturbances.

From water to land: How an invasive clam may function as a resource pulse to terrestrial invertebrates.

PubMed

Novais, Adriana; Souza, Allan T; Ilarri, Martina; Pascoal, Cláudia; Sousa, Ronaldo

2015-12-15

Resource pulses are episodes of low frequency, large magnitude and short duration that result in increased resource availability in space and time, with consequences for food web dynamics. Studies assessing the importance of resource pulses by invasive alien species in the interface between terrestrial and aquatic ecosystems are rare, especially those in the direction from water to land. This study assessed the importance of massive die-offs of the Asian clam Corbicula fluminea (Müller, 1774) as a resource pulse to the terrestrial invertebrate community after an extreme climatic event using a manipulative experiment. We used 5 levels of C. fluminea density (0, 100, 500, 1000 and 2000ind·m(-2)), with terrestrial invertebrates being censused 7, 30 and 90days after C. fluminea addition. We also assessed the possible effect of plots position, where plots that delimited the experiment were assigned as edge plots and the remaining as core plots. Clear differences were detected in abundance, biomass, richness and diversity of terrestrial invertebrates depending on the C. fluminea density, time and position. Interestingly, the highest abundance of adult Diptera was observed 7days after C. fluminea addition, whereas that of the other terrestrial invertebrates was on day 30, both with C. fluminea densities higher than 500ind·m(-2) located on the edge of the experimental design. This study highlights the importance of major resource pulses after massive die-offs of invasive bivalves, contributing with remarkable amounts of carrion for adjacent terrestrial systems. Part of this carrion can be consumed directly by a great number of invertebrate species while the remainder can enter the detrital food web. Given the high density and biomass attained by several invasive bivalves worldwide and the predicted increase in the number, intensity and magnitude of extreme climatic events, the ecological importance of this phenomenon should be further investigated. Copyright © 2015 Elsevier B.V. All rights reserved.

How to Avoid Errors in Error Propagation: Prediction Intervals and Confidence Intervals in Forest Biomass

NASA Astrophysics Data System (ADS)

Lilly, P.; Yanai, R. D.; Buckley, H. L.; Case, B. S.; Woollons, R. C.; Holdaway, R. J.; Johnson, J.

2016-12-01

Calculations of forest biomass and elemental content require many measurements and models, each contributing uncertainty to the final estimates. While sampling error is commonly reported, based on replicate plots, error due to uncertainty in the regression used to estimate biomass from tree diameter is usually not quantified. Some published estimates of uncertainty due to the regression models have used the uncertainty in the prediction of individuals, ignoring uncertainty in the mean, while others have propagated uncertainty in the mean while ignoring individual variation. Using the simple case of the calcium concentration of sugar maple leaves, we compare the variation among individuals (the standard deviation) to the uncertainty in the mean (the standard error) and illustrate the declining importance in the prediction of individual concentrations as the number of individuals increases. For allometric models, the analogous statistics are the prediction interval (or the residual variation in the model fit) and the confidence interval (describing the uncertainty in the best fit model). The effect of propagating these two sources of error is illustrated using the mass of sugar maple foliage. The uncertainty in individual tree predictions was large for plots with few trees; for plots with 30 trees or more, the uncertainty in individuals was less important than the uncertainty in the mean. Authors of previously published analyses have reanalyzed their data to show the magnitude of these two sources of uncertainty in scales ranging from experimental plots to entire countries. The most correct analysis will take both sources of uncertainty into account, but for practical purposes, country-level reports of uncertainty in carbon stocks, as required by the IPCC, can ignore the uncertainty in individuals. Ignoring the uncertainty in the mean will lead to exaggerated estimates of confidence in estimates of forest biomass and carbon and nutrient contents.

Fluorescence, PRI and canopy temperature for water stress detection in cereal crops

NASA Astrophysics Data System (ADS)

Panigada, C.; Rossini, M.; Meroni, M.; Cilia, C.; Busetto, L.; Amaducci, S.; Boschetti, M.; Cogliati, S.; Picchi, V.; Pinto, F.; Marchesi, A.; Colombo, R.

2014-08-01

Narrow-band multispectral remote sensing techniques and thermal imagery were investigated for water stress detection in cereal crops. Visible and near infrared AISA Eagle (Specim, Finland) and thermal AHS-160 (Sensytech Inc., USA) imageries were acquired with an airborne survey on a farm-level experimental site where maize (Zea mays L.) and sorghum (Sorghum bicolor L.) were grown with three different irrigation treatments. Vegetation biophysical and eco-physiological measurements were collected concurrently with the airborne campaign. Leaf fluorescence yield (ΔF/Fm‧) resulted to be a good indirect measure of water stress. Therefore, ΔF/Fm‧ measurements were compared against remotely sensed indicators: (i) the Photochemical Reflectance Index (PRI), (ii) the sun-induced chlorophyll fluorescence at 760 nm (F760), retrieved by the Fraunhofer line depth method and (iii) the canopy temperature (TC) calculated decoupling soil and vegetation contributions. TC was related to ΔF/Fm‧ with the highest determination coefficient (R2 = 0.65), followed by PRI586 (reference band at 586 nm) (R2 = 0.51). The relationship with F760 was significant but weaker (R2 = 0.36). The coefficient of determination increased up to 0.54 when pigment concentration was considered by multiplying ΔF/Fm‧ and chlorophyll content, confirming the close relationship between passive fluorescence signal, pigment content and light photosystem efficiency. PRI586, F760 and TC maps were produced in maize and sorghum plots. The differences in the average values of PRI586, F760 and TC extracted from the plots with different water treatments showed that water treatments were well discriminated in maize plots by the three remotely sensed indicators. This was confirmed by the visual observation of the PRI586, F760 and TC maps, while in sorghum plots, F760 and TC appeared more sensitive to water stress compared to PRI586.

R-CMap-An open-source software for concept mapping.

PubMed

Bar, Haim; Mentch, Lucas

2017-02-01

Planning and evaluating projects often involves input from many stakeholders. Fusing and organizing many different ideas, opinions, and interpretations into a coherent and acceptable plan or project evaluation is challenging. This is especially true when seeking contributions from a large number of participants, especially when not all can participate in group discussions, or when some prefer to contribute their perspectives anonymously. One of the major breakthroughs in the area of evaluation and program planning has been the use of graphical tools to represent the brainstorming process. This provides a quantitative framework for organizing ideas and general concepts into simple-to-interpret graphs. We developed a new, open-source concept mapping software called R-CMap, which is implemented in R. This software provides a graphical user interface to guide users through the analytical process of concept mapping. The R-CMap software allows users to generate a variety of plots, including cluster maps, point rating and cluster rating maps, as well as pattern matching and go-zone plots. Additionally, R-CMap is capable of generating detailed reports that contain useful statistical summaries of the data. The plots and reports can be embedded in Microsoft Office tools such as Word and PowerPoint, where users may manually adjust various plot and table features to achieve the best visual results in their presentations and official reports. The graphical user interface of R-CMap allows users to define cluster names, change the number of clusters, select rating variables for relevant plots, and importantly, select subsets of respondents by demographic criteria. The latter is particularly useful to project managers in order to identify different patterns of preferences by subpopulations. R-CMap is user-friendly, and does not require any programming experience. However, proficient R users can add to its functionality by directly accessing built-in functions in R and sharing new features with the concept mapping community. Copyright © 2016 Elsevier Ltd. All rights reserved.

Using variance components to estimate power in a hierarchically nested sampling design improving monitoring of larval Devils Hole pupfish

USGS Publications Warehouse

Dzul, Maria C.; Dixon, Philip M.; Quist, Michael C.; Dinsomore, Stephen J.; Bower, Michael R.; Wilson, Kevin P.; Gaines, D. Bailey

2013-01-01

We used variance components to assess allocation of sampling effort in a hierarchically nested sampling design for ongoing monitoring of early life history stages of the federally endangered Devils Hole pupfish (DHP) (Cyprinodon diabolis). Sampling design for larval DHP included surveys (5 days each spring 2007–2009), events, and plots. Each survey was comprised of three counting events, where DHP larvae on nine plots were counted plot by plot. Statistical analysis of larval abundance included three components: (1) evaluation of power from various sample size combinations, (2) comparison of power in fixed and random plot designs, and (3) assessment of yearly differences in the power of the survey. Results indicated that increasing the sample size at the lowest level of sampling represented the most realistic option to increase the survey's power, fixed plot designs had greater power than random plot designs, and the power of the larval survey varied by year. This study provides an example of how monitoring efforts may benefit from coupling variance components estimation with power analysis to assess sampling design.

The role of composition, invasives, and maintenance emissions on urban forest carbon stocks.

PubMed

Horn, Josh; Escobedo, Francisco J; Hinkle, Ross; Hostetler, Mark; Timilsina, Nilesh

2015-02-01

There are few field-based, empirical studies quantifying the effect of invasive trees and palms and maintenance-related carbon emissions on changes in urban forest carbon stocks. We estimated carbon (C) stock changes and tree maintenance-related C emissions in a subtropical urban forest by re-measuring a subsample of residential permanent plots during 2009 and 2011, using regional allometric biomass equations, and surveying residential homeowners near Orlando, FL, USA. The effect of native, non-native, invasive tree species and palms on C stocks and sequestration was also quantified. Findings show 17.8 tC/ha in stocks and 1.2 tC/ha/year of net sequestration. The most important species both by frequency of C stocks and sequestration were Quercus laurifolia Michx. and Quercus virginiana Mill., accounting for 20% of all the trees measured; 60% of carbon stocks and over 75% of net C sequestration. Palms contributed to less than 1% of the total C stocks. Natives comprised two-thirds of the tree population and sequestered 90% of all C, while invasive trees and palms accounted for 5 % of net C sequestration. Overall, invasive and exotic trees had a limited contribution to total C stocks and sequestration. Annual tree-related maintenance C emissions were 0.1% of total gross C sequestration. Plot-level tree, palm, and litter cover were correlated to C stocks and net sequestration. Findings can be used to complement existing urban forest C offset accounting and monitoring protocols and to better understand the role of invasive woody plants on urban ecosystem service provision.

Effects of long- and short-term management on the functional structure of meadows through species turnover and intraspecific trait variability.

PubMed

Volf, Martin; Redmond, Conor; Albert, Ágnes J; Le Bagousse-Pinguet, Yoann; Biella, Paolo; Götzenberger, Lars; Hrázský, Záboj; Janeček, Štěpán; Klimešová, Jitka; Lepš, Jan; Šebelíková, Lenka; Vlasatá, Tereza; de Bello, Francesco

2016-04-01

The functional structures of communities respond to environmental changes by both species replacement (turnover) and within-species variation (intraspecific trait variability; ITV). Evidence is lacking on the relative importance of these two components, particularly in response to both short- and long-term environmental disturbance. We hypothesized that such short- and long-term perturbations would induce changes in community functional structure primarily via ITV and turnover, respectively. To test this we applied an experimental design across long-term mown and abandoned meadows, with each plot containing a further level of short-term management treatments: mowing, grazing and abandonment. Within each plot, species composition and trait values [height, shoot biomass, and specific leaf area (SLA)] were recorded on up to five individuals per species. Positive covariations between the contribution of species turnover and ITV occurred for height and shoot biomass in response to both short- and long-term management, indicating that species turnover and intraspecific adjustments selected for similar trait values. Positive covariations also occurred for SLA, but only in response to long-term management. The contributions of turnover and ITV changed depending on both the trait and management trajectory. As expected, communities responded to short-term disturbances mostly through changes in intraspecific trait variability, particularly for height and biomass. Interestingly, for SLA they responded to long-term disturbances by both species turnover and intraspecific adjustments. These findings highlight the importance of both ITV and species turnover in adjusting grassland functional trait response to environmental perturbation, and show that the response is trait specific and affected by disturbance regime history.

The Role of Composition, Invasives, and Maintenance Emissions on Urban Forest Carbon Stocks

NASA Astrophysics Data System (ADS)

Horn, Josh; Escobedo, Francisco J.; Hinkle, Ross; Hostetler, Mark; Timilsina, Nilesh

2015-02-01

There are few field-based, empirical studies quantifying the effect of invasive trees and palms and maintenance-related carbon emissions on changes in urban forest carbon stocks. We estimated carbon (C) stock changes and tree maintenance-related C emissions in a subtropical urban forest by re-measuring a subsample of residential permanent plots during 2009 and 2011, using regional allometric biomass equations, and surveying residential homeowners near Orlando, FL, USA. The effect of native, non-native, invasive tree species and palms on C stocks and sequestration was also quantified. Findings show 17.8 tC/ha in stocks and 1.2 tC/ha/year of net sequestration. The most important species both by frequency of C stocks and sequestration were Quercus laurifolia Michx. and Quercus virginiana Mill., accounting for 20 % of all the trees measured; 60 % of carbon stocks and over 75 % of net C sequestration. Palms contributed to less than 1 % of the total C stocks. Natives comprised two-thirds of the tree population and sequestered 90 % of all C, while invasive trees and palms accounted for 5 % of net C sequestration. Overall, invasive and exotic trees had a limited contribution to total C stocks and sequestration. Annual tree-related maintenance C emissions were 0.1 % of total gross C sequestration. Plot-level tree, palm, and litter cover were correlated to C stocks and net sequestration. Findings can be used to complement existing urban forest C offset accounting and monitoring protocols and to better understand the role of invasive woody plants on urban ecosystem service provision.

Plot-, farm-, and watershed-scale effects of coffee cultivation in runoff and sediment production in western Puerto Rico.

PubMed

Ramos-Scharrón, Carlos E; Figueroa-Sánchez, Yasiel

2017-11-01

The combination of a topographically abrupt wet-tropical setting with the high level of soil exposure that typifies many sun-grown coffee farms represents optimal conditions for high erosion rates. Although traditionally considered as a main cause for water resource degradation, limited empirical evidence has existed to document its true contribution. This study relies on plot-scale experimental results conducted in western Puerto Rico to assess the impact of cultivated surfaces and farm access roads on runoff and sediment production from the plot to the farm and watershed scales. Results show that unsurfaced and graveled road surfaces produce one- to two-orders of magnitude more per unit area runoff than cultivated lands. Similarly, erosion rates from unsurfaced roads are about 102 g m -2 per cm of rainfall and these are two-orders of magnitude greater than from actively cultivated surfaces. Mitigation practices such as uncompacting road surfaces by ripping and gravel application reduce onsite erosion rates to 0.6% and 8% of unsurfaced conditions, respectively. At the farm scale, coffee farms are estimated to produce sediment at a rate of 12-18 Mg ha -1 yr -1 , and roads are undoubtedly the dominant sediment source responsible for 59-95% of the total sediment produced. The costs associated to ameliorating erosion problems through road graveling are high. Therefore, a combined approach that treats road erosion onsite with one that traps sediment before it reaches river networks is the viable solution to this problem. Copyright © 2017 Elsevier Ltd. All rights reserved.

Poincaré plot width, morning urine norepinephrine levels, and autonomic imbalance in children with obstructive sleep apnea.

PubMed

Chaidas, Konstantinos; Tsaoussoglou, Marina; Theodorou, Emmanouel; Lianou, Loukia; Chrousos, George; Kaditis, Athanasios G

2014-08-01

Obstructive sleep apnea (OSA) in childhood is accompanied by sympathetic overflow unopposed by the parasympathetic tone. Complex methods like power spectral analysis of heart rate variability have been applied to study this imbalance. In this report, width of Poincaré scattergram of the R-R interval (parasympathetic tone) and morning urine norepinephrine concentration (sympathetic activity) were used to assess autonomic imbalance. Poincaré plot was obtained from the electrocardiographic channel of nocturnal polysomnography and its width was measured, and norepinephrine-to-creatinine concentration ratio was calculated in morning urine specimen. Twenty children with obstructive sleep apnea and moderate-to-severe nocturnal hypoxemia (oxygen saturation of hemoglobin [SpO(2)] nadir <90%), 24 subjects with mild hypoxemia (SpO(2) nadir ≥90%), and 11 control subjects were recruited. Children with obstructive sleep apnea and moderate-to-severe hypoxemia had significantly narrower Poincaré plot width (318.7 ± 139.3 ms) and higher ln-transformed urine norepinephrine-to-creatinine ratio (4.5 ± 0.6) than control subjects (484.2 ± 104.4 ms and 3.8 ± 0.4, respectively; P < 0.05). Ln-transformed urine norepinephrine levels were inversely related to Poincaré plot width (P = 0.02). Subjects with obstructive sleep apnea and moderate-to-severe nocturnal hypoxemia have enhanced sympathetic activity and reduced parasympathetic drive. Poincaré plot width and urine norepinephrine levels are simple measures of autonomic imbalance in pediatric obstructive sleep apnea. Copyright © 2014 Elsevier Inc. All rights reserved.

Spherical Harmonics Analysis of the ECMWF Global Wind Fields at the 10-Meter Height Level During 1985: A Collection of Figures Illustrating Results

NASA Technical Reports Server (NTRS)

Sanchez, Braulio V.; Nishihama, Masahiro

1997-01-01

Half-daily global wind speeds in the east-west (u) and north-south (v) directions at the 10-meter height level were obtained from the European Centre for Medium Range Weather Forecasts (ECMWF) data set of global analyses. The data set covered the period 1985 January to 1995 January. A spherical harmonic expansion to degree and order 50 was used to perform harmonic analysis of the east-west (u) and north-south (v) velocity field components. The resulting wind field is displayed, as well as the residual of the fit, at a particular time. The contribution of particular coefficients is shown. The time variability of the coefficients up to degree and order 3 is presented. Corresponding power spectrum plots are given. Time series analyses were applied also to the power associated with degrees 0-10; the results are included.

Adult trees cause density-dependent mortality in conspecific seedlings by regulating the frequency of pathogenic soil fungi.

PubMed

Liang, Minxia; Liu, Xubing; Gilbert, Gregory S; Zheng, Yi; Luo, Shan; Huang, Fengmin; Yu, Shixiao

2016-12-01

Negative density-dependent seedling mortality has been widely detected in tropical, subtropical and temperate forests, with soil pathogens as a major driver. Here we investigated how host density affects the composition of soil pathogen communities and consequently influences the strength of plant-soil feedbacks. In field censuses of six 1-ha permanent plots, we found that survival was much lower for newly germinated seedlings that were surrounded by more conspecific adults. The relative abundance of pathogenic fungi in soil increased with increasing conspecific tree density for five of nine tree species; more soil pathogens accumulated around roots where adult tree density was higher, and this greater pathogen frequency was associated with lower seedling survival. Our findings show how tree density influences populations of soil pathogens, which creates plant-soil feedbacks that contribute to community-level and population-level compensatory trends in seedling survival. © 2016 John Wiley & Sons Ltd/CNRS.

The intermediate disturbance hypothesis applies to tropical forests, but disturbance contributes little to tree diversity.

PubMed

Bongers, Frans; Poorter, Lourens; Hawthorne, William D; Sheil, Douglas

2009-08-01

The intermediate disturbance hypothesis (IDH) predicts local species diversity to be maximal at an intermediate level of disturbance. Developed to explain species maintenance and diversity patterns in species-rich ecosystems such as tropical forests, tests of IDH in tropical forest remain scarce, small-scale and contentious. We use an unprecedented large-scale dataset (2504 one-hectare plots and 331,567 trees) to examine whether IDH explains tree diversity variation within wet, moist and dry tropical forests, and we analyse the underlying mechanism by determining responses within functional species groups. We find that disturbance explains more variation in diversity of dry than wet tropical forests. Pioneer species numbers increase with disturbance, shade-tolerant species decrease and intermediate species are indifferent. While diversity indeed peaks at intermediate disturbance levels little variation is explained outside dry forests, and disturbance is less important for species richness patterns in wet tropical rain forests than previously thought.

Assessment of social vulnerability to natural hazards in Nepal

NASA Astrophysics Data System (ADS)

Gautam, Dipendra

2017-12-01

This paper investigates district-wide social vulnerability to natural hazards in Nepal. Disasters such as earthquakes, floods, landslides, epidemics, and droughts are common in Nepal. Every year thousands of people are killed and huge economic and environmental losses occur in Nepal due to various natural hazards. Although natural hazards are well recognized, quantitative and qualitative social vulnerability mapping has not existed until now in Nepal. This study aims to quantify the social vulnerability on a local scale, considering all 75 districts using the available census. To perform district-level vulnerability mapping, 13 variables were selected and aggregated indexes were plotted in an ArcGIS environment. The sum of results shows that only 4 districts in Nepal have a very low social vulnerability index whereas 46 districts (61 %) are at moderate to high social vulnerability levels. Vulnerability mapping highlights the immediate need for decentralized frameworks to tackle natural hazards in district level; additionally, the results of this study can contribute to preparedness, planning and resource management, inter-district coordination, contingency planning, and public awareness efforts.

Agriculture in an area impacted by past uranium mining activities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Carvalho, F. P.; Oliveira, J. M.; Neves, O.

2007-07-01

The shallow aquifer near the old Cunha Baixa uranium mine (Viseu, Portugal) was contaminated by acid mine drainage. Concentration of radionuclides in water from irrigation wells and in the topsoil layer of the agriculture fields nearby display enhanced concentrations of uranium, radium and polonium. Two types of agriculture land in this area were selected, one with enhanced and another with low uranium concentrations, for controlled growth of lettuce and potatoes. Plants were grown in replicate portions of land (two plots) in each soil type and were periodically irrigated with water from wells. In each soil, one plot was irrigated withmore » water containing low concentration of dissolved uranium and the other plot with water containing enhanced concentration of dissolved uranium. At the end of the growth season, plants were harvested and analysed, along with soil and irrigation water samples. Results show the accumulation of radionuclides in edible parts of plants, specially in the field plots with higher radionuclide concentrations in soil. Radionuclides in irrigation water contributed less to the radioactivity accumulated in plants than radionuclides from soils. (authors)« less

Integration of GIS, Geostatistics, and 3-D Technology to Assess the Spatial Distribution of Soil Moisture

NASA Technical Reports Server (NTRS)

Betts, M.; Tsegaye, T.; Tadesse, W.; Coleman, T. L.; Fahsi, A.

1998-01-01

The spatial and temporal distribution of near surface soil moisture is of fundamental importance to many physical, biological, biogeochemical, and hydrological processes. However, knowledge of these space-time dynamics and the processes which control them remains unclear. The integration of geographic information systems (GIS) and geostatistics together promise a simple mechanism to evaluate and display the spatial and temporal distribution of this vital hydrologic and physical variable. Therefore, this research demonstrates the use of geostatistics and GIS to predict and display soil moisture distribution under vegetated and non-vegetated plots. The research was conducted at the Winfred Thomas Agricultural Experiment Station (WTAES), Hazel Green, Alabama. Soil moisture measurement were done on a 10 by 10 m grid from tall fescue grass (GR), alfalfa (AA), bare rough (BR), and bare smooth (BS) plots. Results indicated that variance associated with soil moisture was higher for vegetated plots than non-vegetated plots. The presence of vegetation in general contributed to the spatial variability of soil moisture. Integration of geostatistics and GIS can improve the productivity of farm lands and the precision of farming.

Competitive interactions between a native spider (Frontinella communis, Araneae: Linyphiidae) and an invasive spider (Linyphia triangularis, Araneae: Linyphiidae)

USGS Publications Warehouse

Bednarski, Julie V.; Ginsberg, Howard S.; Jakob, Elizabeth M.

2010-01-01

There are numerous reports of spiders that have become established outside of their native ranges, but few studies examine their impact on native spiders. We examined the effect of the European hammock spider Linyphia triangularis (Araneae, Linyphiidae) on the native bowl-and-doily spider Frontinella communis (Araneae, Linyphiidae) in Acadia National Park, Maine, USA. First, we added L. triangularis to established plots of F. communis. Significantly more F. communis abandoned their webs when L. triangularis were added compared to control plots. Second, we tested whether F. communis were deterred from building webs in areas where L. triangularis was established. Significantly fewer F. communis built webs on plots with L. triangularis than on control plots. In both experiments, L. triangularis sometimes took over webs of F. communis or incorporated F. communis webs into their own webs, but F. communisnever took over or incorporated L. triangularis webs. Competition between L. triangularis and F. communis for both webs and web sites may contribute to the decline of F. communis.

VAM populations in relation to grass invasion associated with forest decline.

PubMed

Vosatka, M; Cudlin, P; Mejstrik, V

1991-01-01

Spruce stands in Northern Bohemia forests, damaged to various degrees by industrial pollution, have shown establishment of grass cover following tree defoliation. Populations of vesicular-arbuscular mycorrhizal (VAM) fungi were studied under this grass cover in four permanent plots with spruce under different levels of pollution stress. Soil and root samples were collected in April and June within each plot as follows: (1) sites without grass, (2) sites with initial stages of grass invasion, and (3) sites with fully developed grass cover. In all plots, the highest number of propagules were recovered from samples taken from sites having full grass cover. Mycorrhizal infection of grass was highest in the plot with the severest pollution damage and lowest in the least damaged plot. The development of grass cover and VAM infection of grass increased with tree defoliation caused by air pollution.

Evaluation method for corrosion level of rebar in RC with electrical impedance measurement

NASA Astrophysics Data System (ADS)

Sasamoto, Akira

2018-04-01

The author reported that the impedance measurement using the 4-terminal method on the RC surface for diagnosing corrosion of internal rebar. The difference between the maximum value at 0.01 Hz and the minimum value around 10 Hz indicates the corrosion level of rebar in that report. This is successive report on a signal processing method for estimating the corrosion level by the measured impedance data to obtain more high accuracy. In the dielectric, a graph of frequency and dielectric constant (Cole-Cole plot diagram by KS Cole and RH Cole article of 1941) draws a shape of circle if the dielectric is independent of frequency but it draws a shape of ellipse in reality due to frequency dependency. Havriliak and Negami have also presented Havriliak-Negami model which introduced parameter into dielectric constant equation which deforms Cole-Cole plot diagram and showed that acquired dielectric data of polymer materials fit to this model with proper parameters. In this report, we first consider electric model connected with resistance and capacitance as a rough model of RC concrete. If the capacitance in this model circuit has some loss of dielectric, it is stated that graph in impedance plot is expected to take as similar deformation in the dielectric Cole-Cole plot. Then a numerical optimization computer code for obtaining parameters in the Cole-Cole plot diagram and Havriliak-Negami model is constructed, and the correlation between the deformation parameter of each model and corrosion is shown by this code. These results are feasibility study for diagnosis of corrosion level of rebar by associated parameters to a shape of impedance graph.

Soil Organic Carbon for Global Benefits - assessing potential SOC increase under SLM technologies worldwide and evaluating tradeoffs and gains of upscaling SLM technologies

NASA Astrophysics Data System (ADS)

Wolfgramm, Bettina; Hurni, Hans; Liniger, Hanspeter; Ruppen, Sebastian; Milne, Eleanor; Bader, Hans-Peter; Scheidegger, Ruth; Amare, Tadele; Yitaferu, Birru; Nazarmavloev, Farrukh; Conder, Malgorzata; Ebneter, Laura; Qadamov, Aslam; Shokirov, Qobiljon; Hergarten, Christian; Schwilch, Gudrun

2013-04-01

There is a fundamental mutual interest between enhancing soil organic carbon (SOC) in the world's soils and the objectives of the major global environmental conventions (UNFCCC, UNCBD, UNCCD). While there is evidence at the case study level that sustainable land management (SLM) technologies increase SOC stocks and SOC related benefits, there is no quantitative data available on the potential for increasing SOC benefits from different SLM technologies and especially from case studies in the developing countries, and a clear understanding of the trade-offs related to SLM up-scaling is missing. This study aims at assessing the potential increase of SOC under SLM technologies worldwide, evaluating tradeoffs and gains in up-scaling SLM for case studies in Tajikistan, Ethiopia and Switzerland. It makes use of the SLM technologies documented in the online database of the World Overview of Conservation Approaches and Technologies (WOCAT). The study consists of three components: 1) Identifying SOC benefits contributing to the major global environmental issues for SLM technologies worldwide as documented in the WOCAT global database 2) Validation of SOC storage potentials and SOC benefit predictions for SLM technologies from the WOCAT database using results from existing comparative case studies at the plot level, using soil spectral libraries and standardized documentations of ecosystem service from the WOCAT database. 3) Understanding trade-offs and win-win scenarios of up-scaling SLM technologies from the plot to the household and landscape level using material flow analysis. This study builds on the premise that the most promising way to increase benefits from land management is to consider already existing sustainable strategies. Such SLM technologies from all over the world documented are accessible in a standardized way in the WOCAT online database. The study thus evaluates SLM technologies from the WOCAT database by calculating the potential SOC storage increase and related benefits by comparing SOC estimates before-and-after establishment of the SLM technology. These results are validated using comparative case studies of plots with-and-without SLM technologies (existing SLM systems versus surrounding, degrading systems). In view of upscaling SLM technologies, it is crucial to understand tradeoffs and gains supporting or hindering the further spread. Systemic biomass management analysis using material flow analysis allows quantifying organic carbon flows and storages for different land management options at the household, but also at landscape level. The study shows results relevant for science, policy and practice for accounting, monitoring and evaluating SOC related ecosystem services: - A comprehensive methodology for SLM impact assessments allowing quantification of SOC storage and SOC related benefits under different SLM technologies, and - Improved understanding of upscaling options for SLM technologies and tradeoffs as well as win-win opportunities for biomass management, SOC content increase, and ecosystem services improvement at the plot and household level.

Visual analytics of large multidimensional data using variable binned scatter plots

NASA Astrophysics Data System (ADS)

Hao, Ming C.; Dayal, Umeshwar; Sharma, Ratnesh K.; Keim, Daniel A.; Janetzko, Halldór

2010-01-01

The scatter plot is a well-known method of visualizing pairs of two-dimensional continuous variables. Multidimensional data can be depicted in a scatter plot matrix. They are intuitive and easy-to-use, but often have a high degree of overlap which may occlude a significant portion of data. In this paper, we propose variable binned scatter plots to allow the visualization of large amounts of data without overlapping. The basic idea is to use a non-uniform (variable) binning of the x and y dimensions and plots all the data points that fall within each bin into corresponding squares. Further, we map a third attribute to color for visualizing clusters. Analysts are able to interact with individual data points for record level information. We have applied these techniques to solve real-world problems on credit card fraud and data center energy consumption to visualize their data distribution and cause-effect among multiple attributes. A comparison of our methods with two recent well-known variants of scatter plots is included.

The Use of Crow-AMSAA Plots to Assess Mishap Trends

NASA Technical Reports Server (NTRS)

Dawson, Jeffrey W.

2011-01-01

Crow-AMSAA (CA) plots are used to model reliability growth. Use of CA plots has expanded into other areas, such as tracking events of interest to management, maintenance problems, and safety mishaps. Safety mishaps can often be successfully modeled using a Poisson probability distribution. CA plots show a Poisson process in log-log space. If the safety mishaps are a stable homogenous Poisson process, a linear fit to the points in a CA plot will have a slope of one. Slopes of greater than one indicate a nonhomogenous Poisson process, with increasing occurrence. Slopes of less than one indicate a nonhomogenous Poisson process, with decreasing occurrence. Changes in slope, known as "cusps," indicate a change in process, which could be an improvement or a degradation. After presenting the CA conceptual framework, examples are given of trending slips, trips and falls, and ergonomic incidents at NASA (from Agency-level data). Crow-AMSAA plotting is a robust tool for trending safety mishaps that can provide insight into safety performance over time.

Disturbance-driven Changes in Soil Exoenzyme Activity and Biogeochemistry of Colorado Forests

NASA Astrophysics Data System (ADS)

Lybrand, R. A.; Gallery, R. E.; Trahan, N. A.; Dynes, E.; Moore, D. J.

2015-12-01

Forest disturbances alter rates of organic matter decomposition by microbes, which introduces uncertainty to the fate of soil carbon and aboveground carbon stocks. Quantifying soil microbial response to disturbance will reduce this uncertainty in dynamic, heterogeneous ecosystems. Here, we assessed how potential exoenzyme activities and biogeochemistry vary across Colorado landscapes disturbed by insect, fire, and flooding. We sampled 56 plots that spanned a burn severity gradient following the 2012 High Park Fire and a beetle kill chronosequence. Topsoil biogeochemistry, potential exoenzyme activity, and microbial biomass were quantified within each plot, and for a subset of 16 plots visited before and after a 2014 rainfall event. Terrain variables were generated from a LiDAR-derived DTM. Our results documented a shift in exoenzyme activity that corresponded to fire-driven changes in pH, which averaged 4.8 ± 0.2 in unburned plots to 6.3 ± 0.4 in severe burn plots. Stepwise multiple linear regressions were employed to predict exoenzyme activity using principal components derived from biogeochemical and terrain variables. The models explained up to 50% of the variance in exoenzyme activity, with the strongest relationships identified for phosphatase and the carbon degrading enzymes, β-Glucosidase and 4-MUB-β-D-cellobioside. The unexplained variance may result from the legacy of disturbance across sites. For example, burned and unburned plots presented contrasting geochemical responses to the 2014 rainfall event. Specifically, PO43- did not differ significantly between the burned and unburned plots in the pre-flood soils. Interestingly, PO43- was significantly different between the two groups in the post-flood soils due to a decrease in PO43- at the unburned plots and a slight increase at the burned plots. Similar trends were recognized for DIN and NH4+ in the burned and unburned sites yet the beetle kill plots exhibited little geochemical response pre- and post-flood. Our results demonstrate that exoenzyme activities are controlled, in part, by topography and disturbance-driven changes in biogeochemistry. Future work will examine how microclimate and disturbance history, such as undocumented flood events, contribute to soil ecological and geochemical variability across complex terrain.

Heterogeneity in fire severity within early season and late season prescribed burns in a mixed-conifer forest

USGS Publications Warehouse

Knapp, E.E.; Keeley, J.E.

2006-01-01

Structural heterogeneity in forests of the Sierra Nevada was historically produced through variation in fire regimes and local environmental factors. The amount of heterogeneity that prescription burning can achieve might now be more limited owing to high fuel loads and increased fuel continuity. Topography, woody fuel loading, and vegetative composition were quantified in plots within replicated early and late season burn units. Two indices of fire severity were evaluated in the same plots after the burns. Scorch height ranged from 2.8 to 25.4 m in early season plots and 3.1 to 38.5 m in late season plots, whereas percentage of ground surface burned ranged from 24 to 96% in early season plots and from 47 to 100% in late season plots. Scorch height was greatest in areas with steeper slopes, higher basal area of live trees, high percentage of basal area composed of pine, and more small woody fuel. Percentage of area burned was greatest in areas with less bare ground and rock cover (more fuel continuity), steeper slopes, and units burned in the fall (lower fuel moisture). Thus topographic and biotic factors still contribute to the abundant heterogeneity in fire severity with prescribed burning, even under the current high fuel loading conditions. Burning areas with high fuel loads in early season when fuels are moister may lead to patterns of heterogeneity in fire effects that more closely approximate the expected patchiness of historical fires.

The kinship2 R package for pedigree data.

PubMed

Sinnwell, Jason P; Therneau, Terry M; Schaid, Daniel J

2014-01-01

The kinship2 package is restructured from the previous kinship package. Existing features are now enhanced and new features added for handling pedigree objects. Pedigree plotting features have been updated to display features on complex pedigrees while adhering to pedigree plotting standards. Kinship matrices can now be calculated for the X chromosome. Other methods have been added to subset and trim pedigrees while maintaining the pedigree structure. We make the kinship2 package available for R on the Contributed R Archives Network (CRAN), where data management is built-in and other packages can use the pedigree object.

Fitting and Calibrating a Multilevel Mixed-Effects Stem Taper Model for Maritime Pine in NW Spain

PubMed Central

Arias-Rodil, Manuel; Castedo-Dorado, Fernando; Cámara-Obregón, Asunción; Diéguez-Aranda, Ulises

2015-01-01

Stem taper data are usually hierarchical (several measurements per tree, and several trees per plot), making application of a multilevel mixed-effects modelling approach essential. However, correlation between trees in the same plot/stand has often been ignored in previous studies. Fitting and calibration of a variable-exponent stem taper function were conducted using data from 420 trees felled in even-aged maritime pine (Pinus pinaster Ait.) stands in NW Spain. In the fitting step, the tree level explained much more variability than the plot level, and therefore calibration at plot level was omitted. Several stem heights were evaluated for measurement of the additional diameter needed for calibration at tree level. Calibration with an additional diameter measured at between 40 and 60% of total tree height showed the greatest improvement in volume and diameter predictions. If additional diameter measurement is not available, the fixed-effects model fitted by the ordinary least squares technique should be used. Finally, we also evaluated how the expansion of parameters with random effects affects the stem taper prediction, as we consider this a key question when applying the mixed-effects modelling approach to taper equations. The results showed that correlation between random effects should be taken into account when assessing the influence of random effects in stem taper prediction. PMID:26630156

SNX -- Starlink Extensions to the NCAR Graphics Utilities

NASA Astrophysics Data System (ADS)

Rees, P. C. T.; Bly, M. J.; Wallace, P. T.

The NCAR graphics suite (SUN/88) consists of a set of subprograms which can be used to produce complete graphs in a variety of formats. The package has been in wide use for some years; the latest version employs the ISO standard GKS interfaces for its low-level plotting, giving it access to all Starlink graphics devices, present and future. The NCAR routines themselves are thoroughly documented, and just a few simple calls will produce graphs of excellent appearance. The package also provides a high level of flexibility, with dozens of different details of the plot independently controllable to give exactly the result required. However, beginners may be daunted by the mass of features offered, and unless they take the extreme step of reading the manual may give up before they realise what the package can do for them. This document describes minor extensions which provide more convenient access to certain features without sacrificing flexibility. The AUTOGRAPH part of the NCAR suite, used in conjunction with the Starlink NCAR extensions and the Starlink low level plotting package SGS (SUN/85), offers an alternative high level system to PGPLOT (SUN/15) for producing graphs of one variable plotted against another. All of the Starlink extensions provided within SNX enhance the power of the facilities provided by AUTOGRAPH and make it more accessible to the beginner.

Different sources of soil CO2 respiration from a drained spruce forest and their dependence on environmental factors

NASA Astrophysics Data System (ADS)

Nousratpour, A.

2011-12-01

The annual CO2 emission from soils corresponds to a large portion of the global carbon cycle and equals 10 percent of the total atmospheric carbon pool. The total forest soil CO2 loss equals the sum of contribution from autotrophic and heterotrophic organisms. The autotrophic respiration is derived from recent photosynthates from the forest canopy and exudates via the roots. The heterotrophic respiration is less directly dependent on root presence and recently assimilated photosynthates, which points to the possibility of separate mechanisms governing the CO2 emissions. The variation of the CO2 flux from these some-what overlapping sources in the soil i.e. rhizospheric and non-rhizosperically is still not fully understood. Soil temperature and water availability in particular have often been used to explain the variation of soil CO2 efflux by using regression methods. In this experiment around 1000 hours of soil CO2-emission rates from a drained spruce forest was collected from 6 plots, among which 3 were previously root excluded. The emission rates were collected during 5 campaigns throughout the growing season along with continuous above ground and below ground temperature and water properties such as precipitation and VPD (vapor pressure deficit). The resulting matrix was analyzed using multivariate statistical model PLSr (Partial Least Squares regression). This operation reduces the dimensionality of large datasets with probable multicollinearity and helps clarify the dependence of a response factor on x- variables. In addition a time series analysis is applied to the dataset to address the time lag between below ground temperature and water properties to the above ground weather conditions such as VPD and air temperature. Mean carbon emission from the control plots (428 mg Carbon m-2 hr-1) was significantly larger than that from the root excluded plots (136 mg Carbon m-2 hr-1). During the growing season more than 2/3 of the total CO2 release was estimated to be root contribution. The results show that the activity in the rhizosphere increased with rising soil temperature, VPD and ground water depletion until a certain point. When the level of ground water depth was deeper than about 0.5 m the dependence was reversed. This effect was either the opposite or lacking in the root excluded plots, which reflects the involvement of the tree roots and the separate factors controlling the different sources of CO2.

IRISpy: Analyzing IRIS Data in Python

NASA Astrophysics Data System (ADS)

Ryan, Daniel; Christe, Steven; Mumford, Stuart; Baruah, Ankit; Timothy, Shelbe; Pereira, Tiago; De Pontieu, Bart

2017-08-01

IRISpy is a new community-developed open-source software library for analysing IRIS level 2 data. It is written in Python, a free, cross-platform, general-purpose, high-level programming language. A wide array of scientific computing software packages have already been developed in Python, from numerical computation (NumPy, SciPy, etc.), to visualization and plotting (matplotlib), to solar-physics-specific data analysis (SunPy). IRISpy is currently under development as a SunPy-affiliated package which means it depends on the SunPy library, follows similar standards and conventions, and is developed with the support of of the SunPy development team. IRISpy’s has two primary data objects, one for analyzing slit-jaw imager data and another for analyzing spectrograph data. Both objects contain basic slicing, indexing, plotting, and animating functionality to allow users to easily inspect, reduce and analyze the data. As part of this functionality the objects can output SunPy Maps, TimeSeries, Spectra, etc. of relevant data slices for easier inspection and analysis. Work is also ongoing to provide additional data analysis functionality including derivation of systematic measurement errors (e.g. readout noise), exposure time correction, residual wavelength calibration, radiometric calibration, and fine scale pointing corrections. IRISpy’s code base is publicly available through github.com and can be contributed to by anyone. In this poster we demonstrate IRISpy’s functionality and future goals of the project. We also encourage interested users to become involved in further developing IRISpy.

Methods of cutting ponderosa pine in the Southwest - Establishment report: Even-aged yield study, Plot 11

Treesearch

Gilbert H. Schubert

1963-01-01

The objectie of the study is to obtain information on the growth and yield of even-aged stands of different stocking levels. The plot will also serve as the start of a detailed growing stock study for the ponderosa pine region.

Population Development of Pasteuria penetrans on Meloidogyne arenaria.

PubMed

Oostendorp, M; Dickson, D W; Mitchell, D J

1991-01-01

A microplot study on the influence of cropping sequences with peanut in summer and bare fallowed or cover crops of rye or vetch in winter on the population development of Pasteuria penetrans was initiated in the spring of 1987. The number of spores of P. penetrans attached per second-stage juvenile of Meloidogyne arenaria race 1 increased from 0.11 in the fall of 1987 to 7.6, 8.6, and 3.6 in the fall of 1989 in the rye, vetch, and fallowed plots, respectively. Higher (P

Uploading, Searching and Visualizing of Paleomagnetic and Rock Magnetic Data in the Online MagIC Database

NASA Astrophysics Data System (ADS)

Minnett, R.; Koppers, A.; Tauxe, L.; Constable, C.; Donadini, F.

2007-12-01

The Magnetics Information Consortium (MagIC) is commissioned to implement and maintain an online portal to a relational database populated by both rock and paleomagnetic data. The goal of MagIC is to archive all available measurements and derived properties from paleomagnetic studies of directions and intensities, and for rock magnetic experiments (hysteresis, remanence, susceptibility, anisotropy). MagIC is hosted under EarthRef.org at http://earthref.org/MAGIC/ and will soon implement two search nodes, one for paleomagnetism and one for rock magnetism. Currently the PMAG node is operational. Both nodes provide query building based on location, reference, methods applied, material type and geological age, as well as a visual map interface to browse and select locations. Users can also browse the database by data type or by data compilation to view all contributions associated with well known earlier collections like PINT, GMPDB or PSVRL. The query result set is displayed in a digestible tabular format allowing the user to descend from locations to sites, samples, specimens and measurements. At each stage, the result set can be saved and, where appropriate, can be visualized by plotting global location maps, equal area, XY, age, and depth plots, or typical Zijderveld, hysteresis, magnetization and remanence diagrams. User contributions to the MagIC database are critical to achieving a useful research tool. We have developed a standard data and metadata template (version 2.3) that can be used to format and upload all data at the time of publication in Earth Science journals. Software tools are provided to facilitate population of these templates within Microsoft Excel. These tools allow for the import/export of text files and provide advanced functionality to manage and edit the data, and to perform various internal checks to maintain data integrity and prepare for uploading. The MagIC Contribution Wizard at http://earthref.org/MAGIC/upload.htm executes the upload and takes only a few minutes to process tens of thousands of data records. The standardized MagIC template files are stored in the digital archives of EarthRef.org where they remain available for download by the public (in both text and Excel format). Finally, the contents of these template files are automatically parsed into the online relational database, making the data available for online searches in the paleomagnetic and rock magnetic search nodes. During the upload process the owner has the option of keeping the contribution private so it can be viewed in the context of other data sets and visualized using the suite of MagIC plotting tools. Alternatively, the new data can be password protected and shared with a group of users at the contributor's discretion. Once they are published and the owner is comfortable making the upload publicly accessible, the MagIC Editing Committee reviews the contribution for adherence to the MagIC data model and conventions to ensure a high level of data integrity.

Effects of processed oil shale on the element content of Atriplex cancescens

USGS Publications Warehouse

Anderson, B.M.

1982-01-01

Samples of four-wing saltbush were collected from the Colorado State University Intensive Oil Shale Revegetation Study Site test plots in the Piceance basin, Colorado. The test plots were constructed to evaluate the effects of processed oil shale geochemistry on plant growth using various thicknesses of soil cover over the processed shale and/or over a gravel barrier between the shale and soil. Generally, the thicker the soil cover, the less the influence of the shale geochemistry on the element concentrations in the plants. Concentrations of 20 elements were larger in the ash of four-wing saltbush growing on the plot with the gravel barrier (between the soil and processed shale) when compared to the sample from the control plot. A greater water content in the soil in this plot has been reported, and the interaction between the increased, percolating water and shale may have increased the availability of these elements for plant uptake. Concentrations of boron, copper, fluorine, lithium, molybdenum, selenium, silicon, and zinc were larger in the samples grown over processed shale, compared to those from the control plot, and concentrations for barium, calcium, lanthanum, niobium, phosphorus, and strontium were smaller. Concentrations for arsenic, boron, fluorine, molybdenum, and selenium-- considered to be potential toxic contaminants--were similar to results reported in the literature for vegetation from the test plots. The copper-to-molybdenum ratios in three of the four samples of four-wing saltbush growing over the processed shale were below the ratio of 2:1, which is judged detrimental to ruminants, particularly cattle. Boron concentrations averaged 140 ppm, well above the phytotoxicity level for most plant species. Arsenic, fluorine, and selenium concentrations were below toxic levels, and thus should not present any problem for revegetation or forage use at this time.

Conversion of sagebrush shrublands to exotic annual grasslands negatively impacts small mammal communities

USGS Publications Warehouse

Ostoja, S.M.; Schupp, E.W.

2009-01-01

Aim The exotic annual cheatgrass (Bromus tectorum) is fast replacing sagebrush (Artemisia tridentata) communities throughout the Great Basin Desert and nearby regions in the Western United States, impacting native plant communities and altering fire regimes, which contributes to the long-term persistence of this weedy species. The effect of this conversion on native faunal communities remains largely unexamined. We assess the impact of conversion from native perennial to exotic annual plant communities on desert rodent communities. Location Wyoming big sagebrush shrublands and nearby sites previously converted to cheatgrass-dominated annual grasslands in the Great Basin Desert, Utah, USA. Methods At two sites in Tooele County, Utah, USA, we investigated with Sherman live trapping whether intact sagebrush vegetation and nearby converted Bromus tectorum-dominated vegetation differed in rodent abundance, diversity and community composition. Results Rodent abundance and species richness were considerably greater in sagebrush plots than in cheatgrass-dominated plots. Nine species were captured in sagebrush plots; five of these were also trapped in cheatgrass plots, all at lower abundances than in the sagebrush. In contrast, cheatgrass-dominated plots had no species that were not found in sagebrush. In addition, the site that had been converted to cheatgrass longer had lower abundances of rodents than the site more recently converted to cheatgrass-dominated plots. Despite large differences in abundances and species richness, Simpson's D diversity and Shannon-Wiener diversity and Brillouin evenness indices did not differ between sagebrush and cheatgrass-dominated plots. Main conclusions This survey of rodent communities in native sagebrush and in converted cheatgrass-dominated vegetation suggests that the abundances and community composition of rodents may be shifting, potentially at the larger spatial scale of the entire Great Basin, where cheatgrass continues to invade and dominate more landscape at a rapid rate. ?? 2009 Blackwell Publishing Ltd.

Residual Effects of Fertilization History Increase Nitrous Oxide Emissions from Zero-N Controls: Implications for Estimating Fertilizer-Induced Emission Factors.

PubMed

LaHue, Gabriel T; van Kessel, Chris; Linquist, Bruce A; Adviento-Borbe, Maria Arlene; Fonte, Steven J

2016-09-01

Agricultural N fertilization is the dominant driver of increasing atmospheric nitrous oxide (NO) concentrations over the past half-century, yet there is considerable uncertainty in estimates of NO emissions from agriculture. Such estimates are typically based on the amount of N applied and a fertilizer-induced emission factor (EF), which is calculated as the difference in emissions between a fertilized plot and a zero-N control plot divided by the amount of N applied. A fertilizer-induced EF of 1% is currently recognized by the Intergovernmental Panel on Climate Change (IPCC) based on several studies analyzing published field measurements of NO emissions. Although many zero-N control plots used in these measurements received historical N applications, the potential for a residual impact of these inputs on NO emissions has been largely ignored and remains poorly understood. To address this issue, we compared NO emissions under laboratory conditions from soils sampled within zero-N control plots that had historically received N inputs versus soils from plots that had no N inputs for 20 yr. Historical N fertilization of zero-N control plots increased initial NO emissions by roughly one order of magnitude on average relative to historically unfertilized control plots. Higher NO emissions were positively correlated with extractable N and potentially mineralizable N. This finding suggests that accounting for fertilization history may help reduce the uncertainty associated with the IPCC fertilizer-induced EF and more accurately estimate the contribution of fertilizer N to agricultural NO emissions, although further research to demonstrate this relationship in the field is needed. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

How Does Gender Affect Sustainable Intensification of Cereal Production in the West African Sahel? Evidence from Burkina Faso.

PubMed

Theriault, Veronique; Smale, Melinda; Haider, Hamza

2017-04-01

Better understanding of gender differences in the adoption of agricultural intensification strategies is crucial for designing effective policies to close the gender gap while sustainably enhancing farm productivity. We examine gender differences in adoption rates, likelihood and determinants of adopting strategy sets that enhance yields, protect crops, and restore soils in the West African Sahel, based on analysis of cereal production in Burkina Faso. Applying a multivariate probit model to a nationally representative household panel, we exploit the individual plot as unit of analysis and control for plot manager characteristics along with other covariates. Reflecting the socio-cultural context of farming combined with the economic attributes of inputs, we find that female managers of individual cereal fields are less likely than their male counterparts to adopt yield-enhancing and soil-restoring strategies, although no differential is apparent for yield-protecting strategies. More broadly, gender-disaggregated regressions demonstrate that adoption determinants differ by gender. Plot manager characteristics, including age, marital status, and access to credit or extension services do influence adoption decisions. Furthermore, household resources influence the probability of adopting intensification strategy sets differently by gender of the plot manager. Variables expressing the availability of household labor strongly influence the adoption of soil-restoring strategies by female plot managers. By contrast, household resources such as extent of livestock owned, value of non-farm income, and area planted to cotton affect the adoption choices of male plot managers. Rectifying the male bias in extension services along with improving access to credit, income, and equipment to female plot managers could contribute to sustainable agricultural intensification.

The pros and cons of funnel plots as an aid to risk communication and patient decision making.

PubMed

Rakow, Tim; Wright, Rebecca J; Spiegelhalter, David J; Bull, Catherine

2015-05-01

Funnel plots, which simultaneously display a sample statistic and the corresponding sample size for multiple cases, have a range of applications. In medicine, they are used to display treatment outcome rates and caseload volume by institution, which can inform strategic decisions about health care delivery. We investigated lay people's understanding of such plots and explored their suitability as an aid to individual treatment decisions. In two studies, 172 participants answered objective questions about funnel plots representing the surgical outcomes (survival or mortality rates) of institutions varying in caseload, and indicated their preferred institutions. Accuracy for extracting objective information was high, unless question phrasing was inconsistent with the plot's survival/mortality framing, or participants had low numeracy levels. Participants integrated caseload-volume and outcome-rate data when forming preferences, but were influenced by reference lines on the plot to make inappropriate discriminations between institutions with similar outcome rates. With careful choice of accompanying language, funnel plots can be readily understood and are therefore a useful tool for communicating risk. However, they are less effective as a decision aid for individual patient's treatment decisions, and we recommend refinements to the standard presentation of the plots if they are to be used for that purpose. © 2014 The British Psychological Society.

Effect of Woody Debris abundance on daytime refuge use by cotton mice.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hinkelman, Travis, M.; Loeb, Susan, C.

Abstract - Daytime refuges are important to nocturnal rodents for protection from predators and environmental extremes. Because refuges of forest-dwelling rodents are often associated with woody debris, we examined refuge use by 37 radio-collared Peromyscus gossypinus (cotton mice) in experimental plots with different levels of woody debris. Treatment plots had six times (≈ 60 m3/ha) the volume of woody debris as control plots (≈ 10 m3/ha). Of 247 refuges, 159 were in rotting stumps (64%), 32 were in root boles (13%), 19 were in brush piles (8%), and 16 were in logs (6%); 10 refuges could not be identified. Stumpsmore » were the most common refuge type in both treatments, but the distribution of refuge types was significantly different between treatment and control plots. Root boles and brush piles were used more on treatment plots than on control plots, and logs were used more on control plots than on treatment plots. Refuge type and vegetation cover were the best predictors of refuge use by cotton mice; root bole refuges and refuges with less vegetation cover received greater-than-expected use by mice. Abundant refuges, particularly root boles, may improve habitat quality for cotton mice in southeastern pine forests.« less

Nitrogen immobilization by wood-chip application: Protecting water quality in a northern hardwood forest

USGS Publications Warehouse

Homyak, P.M.; Yanai, R.D.; Burns, Douglas A.; Briggs, R.D.; Germain, R.H.

2008-01-01

Forest harvesting disrupts the nitrogen cycle, which may affect stream water quality by increasing nitrate concentrations, reducing pH and acid neutralizing capacity, and mobilizing aluminum and base cations. We tested the application of wood chips derived from logging slash to increase immobilization of N after harvesting, which should reduce nitrate flux to streams. In August 2004, a stand of northern hardwoods was patch-clearcut in the Catskill Mountains, NY, and four replicates of three treatments were implemented in five 0.2-ha cut patches. Wood chips were applied to the soil surface at a rate equivalent to the amount of slash smaller than eight inches in diameter (1?? treatment). A second treatment doubled that rate (2??), and a third treatment received no chips (0??). Additionally, three uncut reference plots were established in nearby forested areas. Ion exchange resin bags and soil KCl-extractions were used to monitor nitrate availability in the upper 5-10 cm of soil approximately every seven weeks, except in winter. Resin bags indicated that the wood chips retained 30% or 42% of the nitrate pulse, while for KCl extracts, the retention rate was 78% or 100% of the difference between 0?? and uncut plots. During the fall following harvest, wood-chip treated plots had resin bag soil nitrate concentrations about 25% of those in 0?? plots (p = 0.0001). In the first growing season after the cut, nitrate concentrations in wood-chip treated plots for KCl extracts were 13% of those in 0?? treatments (p = 0.03) in May and about half those in 0?? treatments (p = 0.01) in July for resin bags. During spring snowmelt, however, nitrate concentrations were high and indistinguishable among treatments, including the uncut reference plots for resin bags and below detection limit for KCl extracts. Wood chips incubated in litterbags had an initial C:N of 125:1, which then decreased to 70:1 after one year of field incubation. These changes in C:N values indicate that the wood-chip application can potentially immobilize between 19 and 38 kg N ha-1 in the first year after harvesting, depending on the rate of wood-chip application. Our results suggest that the application of wood chips following harvesting operations can contribute to the protection of water quality and warrant additional research as a new Best Management Practice following cutting in regions that receive elevated levels of atmospheric N deposition. ?? 2008 Elsevier B.V. All rights reserved.

Six-Year Nitrogen-Water Interaction Shifts the Frequency Distribution and Size Inequality of the First-Order Roots of Fraxinus mandschurica in a Mixed Mature Pinus koraiensis Forest.

PubMed

Wang, Cunguo; Geng, Zhenzhen; Chen, Zhao; Li, Jiandong; Guo, Wei; Zhao, Tian-Hong; Cao, Ying; Shen, Si; Jin, Daming; Li, Mai-He

2017-01-01

The variation in fine root traits in terms of size inequality at the individual root level can be identified as a strategy for adapting to the drastic changes in soil water and nutrient availabilities. The Gini and Lorenz asymmetry coefficients have been applied to describe the overall degree of size inequality, which, however, are neglected when conventional statistical means are calculated. Here, we used the Gini coefficient, Lorenz asymmetry coefficient and statistical mean in an investigation of Fraxinus mandschurica roots in a mixed mature Pinus koraiensis forest on Changbai Mountain, China. We analyzed 967 individual roots to determine the responses of length, diameter and area of the first-order roots and of branching intensity to 6 years of nitrogen addition (N), rainfall reduction (W) and their combination (NW). We found that first-order roots had a significantly greater average length and area but had smaller Gini coefficients in NW plots compared to in control plots (CK). Furthermore, the relationship between first-order root length and branching intensity was negative in CK, N, and W plots but positive in NW plots. The Lorenz asymmetry coefficient was >1 for the first-order root diameter in NW and W plots as well as for branching intensity in N plots. The bimodal frequency distribution of the first-order root length in NW plots differed clearly from the unimodal one in CK, N, and W plots. These results demonstrate that not only the mean but also the variation and the distribution mode of the first-order roots of F. mandschurica respond to soil nitrogen and water availability. The changes in size inequality of the first-order root traits suggest that Gini and Lorenz asymmetry coefficients can serve as informative parameters in ecological investigations of roots to improve our ability to predict how trees will respond to a changing climate at the individual root level.

Six-Year Nitrogen–Water Interaction Shifts the Frequency Distribution and Size Inequality of the First-Order Roots of Fraxinus mandschurica in a Mixed Mature Pinus koraiensis Forest

PubMed Central

Wang, Cunguo; Geng, Zhenzhen; Chen, Zhao; Li, Jiandong; Guo, Wei; Zhao, Tian-Hong; Cao, Ying; Shen, Si; Jin, Daming; Li, Mai-He

2017-01-01

The variation in fine root traits in terms of size inequality at the individual root level can be identified as a strategy for adapting to the drastic changes in soil water and nutrient availabilities. The Gini and Lorenz asymmetry coefficients have been applied to describe the overall degree of size inequality, which, however, are neglected when conventional statistical means are calculated. Here, we used the Gini coefficient, Lorenz asymmetry coefficient and statistical mean in an investigation of Fraxinus mandschurica roots in a mixed mature Pinus koraiensis forest on Changbai Mountain, China. We analyzed 967 individual roots to determine the responses of length, diameter and area of the first-order roots and of branching intensity to 6 years of nitrogen addition (N), rainfall reduction (W) and their combination (NW). We found that first-order roots had a significantly greater average length and area but had smaller Gini coefficients in NW plots compared to in control plots (CK). Furthermore, the relationship between first-order root length and branching intensity was negative in CK, N, and W plots but positive in NW plots. The Lorenz asymmetry coefficient was >1 for the first-order root diameter in NW and W plots as well as for branching intensity in N plots. The bimodal frequency distribution of the first-order root length in NW plots differed clearly from the unimodal one in CK, N, and W plots. These results demonstrate that not only the mean but also the variation and the distribution mode of the first-order roots of F. mandschurica respond to soil nitrogen and water availability. The changes in size inequality of the first-order root traits suggest that Gini and Lorenz asymmetry coefficients can serve as informative parameters in ecological investigations of roots to improve our ability to predict how trees will respond to a changing climate at the individual root level. PMID:29018474

The soil-water balance simulations of a grassland in response to CO2, rainfall, and biodiversity manipulations at BioCON

NASA Astrophysics Data System (ADS)

Flinker, R. H.; Cardenas, M.; Caldwell, T. G.; Rich, R.; Reich, P.

2013-12-01

The BioCON (Biodiversity, CO2 and N) experiment has been continuously running since 1997. Operated by the University of Minnesota and located within the Cedar Creek Ecosystem Science Reserve in Minnesota, USA, BioCON is a Free-Air CO2 Enrichment (FACE) experiment that investigates plant community response to three key environmental variables: nitrogen, atmospheric CO2 and biodiversity. More recently rainfall exclusion and temperature manipulation were added to the experiment which amounts to 371 plots. The site attempts to replicate predicted average temperature increases and a northern shift of plant species and any associated consequences. FACE experiments have been conducted for a number of years in different countries, but the focus has generally been on how plant communities, soil respiration and microbes respond. Minimal work has been focused on the hydrologic aspects of these experiments which are potentially valuable for investigating global warming effects on local and plot-scale ecohydrology. Thus, the objective of this work is to characterize and model unsaturated flow for different CO2 and rainfall treatments in order to see how they affect soil moisture dynamics and groundwater recharge on grasslands of central Minnesota. Our study focuses on simulating soil moisture dynamics in eighteen of the BioCON plots: six bare plots with regular rainfall regimes (zero plant species, three plots with elevated atmospheric CO2 levels), six regular rainfall regimes (nine plant species, three plots with elevated atmospheric CO2 levels) and six reduced rainfall regimes (nine plant species, three plots with elevated atmospheric CO2 levels). The Simultaneous Heat and Water (SHAW) model, which solves the Richards equation for unsaturated zone water flow coupled to a comprehensive energy balance model, was parameterized with a combination of field and lab estimates of soil properties. Field estimates of saturated hydraulic conductivity using tension infiltrometers ranged from 9.8 x 10-4 to 6.7 x 10-3 cm/s. Soil cores were collected and analyzed for soil hydraulic properties (texture, unsaturated hydraulic conductivity and moisture retention). From the grain size analyzes of soil samples collected every 10 cm until 1m depth, the soil is homogenous and on average 87% sand, 11% silt and 2% clay. We will be presenting results from the simulations and statistical comparisons to observations of soil moisture at four depths in each plot.

Estimating Procurement Cost Growth Using Logistic and Multiple Regression

DTIC Science & Technology

2003-03-01

Figure 4). The plots fail to pass the visual inspection for constant variance as well as the Breusch - Pagan test (Neter, 1996: 112) at an alpha level...plots fail to pass the visual inspection for constant variance as well as the Breusch - Pagan test at an alpha level of 0.05. Based on these findings...amount of cost growth a program will have 13 once model A deems that the program will incur cost growth. Sipple conducts validation testing on

Inelastic lepton-deuteron scattering: Possible coherent effects

NASA Astrophysics Data System (ADS)

Yen, G. D.; Vary, J. P.

1989-07-01

Electron-deuteron data exhibit some unusual secondary peaks in the plots of νW2 versus Bjorken x. It is our spectulation that these peaks are evidence of interference between three-quark and the six-quark cluster contributions to the inclusive data.

Using small-scale rainfall simulation to assess temporal changes in pre- and post-fire soil hydrology and erosion: the value of fixed-position plots

NASA Astrophysics Data System (ADS)

Ferreira, Carla S. S.; Shakesby, Rick A.; Bento, Célia P. M.; Walsh, Rory P. D.; Ferreira, António J. D.

2013-04-01

In recent decades, wildfire has become both frequent and severe in southern Europe leading to widespread research into its impacts on soil erosion, soil and water quality. Rainfall simulation has become established as a popular technique to assess these impacts, as it can be conducted under controlled conditions (notably, with respect to rainfall) and is a very cost-effective and rapid way to compare overland flow and suspended sediment generation within burned and unburned sites. Particular advantages are that: (1) results can be obtained before the first post-fire rainfall events; and (2) experiments can reproduce controlled storm events, with similar characteristics to natural rain. Although plot sizes vary (0.09-30m2), most researchers have used < 1m2 plots because of logistical difficulties of setting up larger plots especially in burned areas that may lack good access and local water supplies. Disadvantages with using small plots, however, particularly on burned terrain, include: (1) the difficulty of installing the plots without disturbing the soil; (2) the strong influence of plot boundaries on overland flow and sediment production. Significant replication is generally considered necessary to take account of high variability in results that are due in part to these effects. One response to these problems is a 'fixed plot' approach in which bounded plots are left in place for re-use throughout the study. A problem here, however, would be progressive sediment exhaustion due to the 'island' effect of the plots caused by their isolation from upslope sediment transfer. This paper assesses the usefulness of a repeat-simulation plot approach in assessing temporal change in overland flow and erosion in post-fire situations that minimizes the island effect by partial removal of plot boundaries between surveys. This approach was tested over a 2.5-year period in a small (9 ha) catchment in central Portugal subjected to an experimental fire in 2009. Five rainfall simulation plots 0.25m2 in size were installed close to sediment traps (contributing areas: 498-4238m2) collecting sediment eroded by overland flow caused by natural rainfall. The plots were installed pre-fire and experiments carried out under 'dry' and 'wet' antecedent conditions on six occasions from pre-fire to two years after the fire. The lateral boundaries of each plot were left in place, but the upslope boundary and central (outlet) section of the downslope boundary were removed between surveys and re-installed and sealed each time measurements were carried out. Having fixed positions of plots minimised soil disturbance on each monitoring occasion and meant that, for any given plot, results were directly comparable and gave a more reliable picture of change through time. Removing the upper and lower boundaries of the plots between measurements allowed the soil to undergo processes similar to those on the surrounding slope and reduced the 'island' effect associated with continuously bounded plots. Results from the adjacent sediment traps, which provided a parallel temporal record of hillslope-scale overland flow and sediment redistribution patterns under natural rainfall, are used to judge the usefulness of the in situ simulation plots approach.

SU-E-J-86: Lobar Lung Function Quantification by PET Galligas and CT Ventilation Imaging in Lung Cancer Patients

DOE Office of Scientific and Technical Information (OSTI.GOV)

Eslick, E; Kipritidis, J; Keall, P

2014-06-01

Purpose: The purpose of this study was to quantify the lobar lung function using the novel PET Galligas ([68Ga]-carbon nanoparticle) ventilation imaging and the investigational CT ventilation imaging in lung cancer patients pre-treatment. Methods: We present results on our first three lung cancer patients (2 male, mean age 78 years) as part of an ongoing ethics approved study. For each patient a PET Galligas ventilation (PET-V) image and a pair of breath hold CT images (end-exhale and end-inhale tidal volumes) were acquired using a Siemens Biograph PET CT. CT-ventilation (CT-V) images were created from the pair of CT images usingmore » deformable image registration (DIR) algorithms and the Hounsfield Unit (HU) ventilation metric. A comparison of ventilation quantification from each modality was done on the lobar level and the voxel level. A Bland-Altman plot was used to assess the difference in mean percentage contribution of each lobe to the total lung function between the two modalities. For each patient, a voxel-wise Spearmans correlation was calculated for the whole lungs between the two modalities. Results: The Bland-Altman plot demonstrated strong agreement between PET-V and CT-V for assessment of lobar function (r=0.99, p<0.001; range mean difference: −5.5 to 3.0). The correlation between PET-V and CT-V at the voxel level was moderate(r=0.60, p<0.001). Conclusion: This preliminary study on the three patients data sets demonstrated strong agreement between PET and CT ventilation imaging for the assessment of pre-treatment lung function at the lobar level. Agreement was only moderate at the level of voxel correlations. These results indicate that CT ventilation imaging has potential for assessing pre-treatment lobar lung function in lung cancer patients.« less

SPRUCE Bog Surface Elevation Assessments with SET Instrument Beginning in 2013

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hanson, Paul J; Phillips, Jana R; Brice, Deanne J

This data set reports plot-specific bog surface elevation measurements collected with the SPRUCE Elevation Transect (SET) instrument. Measurements are reported as absolute elevation in meters above mean sea level for two locations in each of the SPRUCE experimental treatment plots and additional ambient boardwalk plots -- 4, 5, 6, 7, 8, 9, 10, 11, 13, 14, 15, 16, 17, 19, 20 and 21. This data set reports measurements collected from June 2013 through August 2017, but it will be appended annually as new data are collected.

Scaling, propagating and mapping uncertainty in spectroscopy-derived foliar traits from the leaf to the image

NASA Astrophysics Data System (ADS)

Singh, A.; Serbin, S. P.; Kingdon, C.; Townsend, P. A.

2013-12-01

A major goal of remote sensing, and imaging spectroscopy in particular, is the development of generalizable algorithms to repeatedly and accurately map ecosystem properties such as canopy chemistry across space and time. Existing methods must therefore be tested across a range of measurement approaches to identify and overcome limits to the consistent retrieval of such properties from spectroscopic imagery. Here we illustrate a general approach for the estimation of key foliar biochemical and morphological traits from spectroscopic imagery derived from the AVIRIS instrument and the propagation of errors from the leaf to the image scale using partial least squares regression (PLSR) techniques. Our method involves the integration of three types of data representing different scales of observation: At the image scale, the images were normalized for atmospheric, illumination and BRDF effects. Spectra from field plot locations were extracted from the 51AVIRIS images and were averaged when the field plot was larger than a single pixel. At the plot level, the scaling was conducted using multiple replicates (1000) derived from the leaf-level uncertainty estimates to generate plot-level estimates with their associated uncertainties. Leaf-level estimates of foliar traits (%N, %C, %Fiber, %Cellulose, %Lignin, LMA) were scaled to the canopy based on relative species composition of each plot. Image spectra were iteratively split into 50/50 randomized calibration-validation datasets and multiple (500) trait-predictive PLSR models were generated, this time sampling from within the plot-level uncertainty distribution. This allowed the propagation of uncertainty from the leaf-level dependent variables to the plot level, and finally to models built using AVIRIS image spectra. Moreover, this method allows us to generate spatially explicit maps of uncertainty in our sampled traits. Both LMA and %N PLSR models had a R2 greater than 0.8, root mean square errors (RMSEs) for both variables were less than 6% of the range of data. Fiber and lignin were predicted with R2 > 0.65 and carbon and cellulose greater than 0.5. Although R2 of these variables were lower than LMA and %N, their RMSE values were beneath 9% of the range of data. The comparatively lower R2 values for %C and cellulose in particular were related to the low amount of natural variability in these constituents. Further, coefficients from the randomized set of PLSR models were applied to imagery and aggregated to obtain pixel-wise predicted means and uncertainty estimates for each foliar trait. The resulting maps of nutritional and morphological properties together with their overall uncertainties represent a first-of-its-kind data product for examining the spatio-temporal patterns of forest functioning and nutrient cycling. These data are now being used to relate foliar traits with ecosystem processes such as streamwater nutrient export and insect herbivory. In addition, the ability to assign a retrieval uncertainty enables more efficient assimilation of these data products into ecosystem models to help constrain carbon and nutrient cycling projections.

Supporting document for the historical tank content estimate for AY-tank farm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brevick, C H; Stroup, J L; Funk, J. W.

1997-03-12

This Supporting Document provides historical in-depth characterization information on AY-Tank Farm, such as historical waste transfer and level data, tank physical information, temperature plots, liquid observation well plots, chemical analyte and radionuclide inventories for the Historical Tank Content Estimate Report for the Southeast Quadrant of the Hanford 200 Areas.

Effect of woody debris abundance on daytime refuge use by cotton mice

Treesearch

Travis M. Hinkelman; Susan C. Loeb

2007-01-01

Daytime refuges are important to nocturnal rodents for protection from predators and environmental extremes. Because refuges of forest-dwelling rodents are often associated with woody debris, we examined refuge use by 37 radio-collared Peromyscus gossypinus (cotton mice) in experimental plots with different levels of woody debris. Treatment plots had...

Models for estimation and simulation of crown and canopy cover

Treesearch

John D. Shaw

2005-01-01

Crown width measurements collected during Forest Inventory and Analysis and Forest Health Monitoring surveys are being used to develop individual tree crown width models and plot-level canopy cover models for species and forest types in the Intermountain West. Several model applications are considered in the development process, including remote sensing of plot...

A Multiple Logistic Regression Model for Predicting the Development of Phytophthora ramorum symptoms in Tanoak (Lithocarpus densiflorus)

Treesearch

Mark Spencer; Kevin O' Hara

2007-01-01

Phytophthora ramorum attacks tanoak (Lithocarpus densiflorus) in California and Oregon. We present a stand-level study examining the presence of disease symptoms in individual stems. Working with data from four plots in redwood (Sequoia sempervirens)/tanoak forests in Marin County, and three plots in Mendocino...

Continuum of risk analysis methods to assess tillage system sustainability at the experimental plot level

USDA-ARS?s Scientific Manuscript database

The primary goal of this study was to evaluate the efficacy of stochastic dominance and stochastic efficiency with respect to a function (SERF) methodology for ranking conventional and conservation tillage systems using 14 years (1990-2003) of economic budget data collected from 36 plots at the Iowa...

Effects of Experimental Manipulations of Course Woody Debris on Sorcids and Other Fauna

DOE Office of Scientific and Technical Information (OSTI.GOV)

McCay, T.S.; Komoroski, M.J.; Ford, W.M.

2001-06-10

The authors studied the relationship between the level of course woody debris in experimental plots of mature loblolly pine and the richness and abundance of shrews, reptiles and amphibians. Comparisons were made between plots in which all down and standing debris were removed and plots that were not treated. Removal of woody debris resulted in a week treatment effect. The capture of southeastern shrews declined through the period perhaps due to drought. The least common shrew demonstrated the strongest effects from removal.In sampling 37 species of amphibians were observed. The Carolina anole and the red salamander were captured more frequentlymore » on removal plots. No difference were found between removal and controls with regard to reptiles.« less

Developing user-friendly habitat suitability tools from regional stream fish survey data

USGS Publications Warehouse

Zorn, T.G.; Seelbach, P.; Wiley, M.J.

2011-01-01

We developed user-friendly fish habitat suitability tools (plots) for fishery managers in Michigan; these tools are based on driving habitat variables and fish population estimates for several hundred stream sites throughout the state. We generated contour plots to show patterns in fish biomass for over 60 common species (and for 120 species grouped at the family level) in relation to axes of catchment area and low-flow yield (90% exceedance flow divided by catchment area) and also in relation to axes of mean and weekly range of July temperatures. The plots showed distinct patterns in fish habitat suitability at each level of biological organization studied and were useful for quantitatively comparing river sites. We demonstrate how these plots can be used to support stream management, and we provide examples pertaining to resource assessment, trout stocking, angling regulations, chemical reclamation of marginal trout streams, indicator species, instream flow protection, and habitat restoration. These straightforward and effective tools are electronically available so that managers can easily access and incorporate them into decision protocols and presentations.

Climate Change and Ecosystem Services Output Efficiency in Southern Loblolly Pine Forests.

PubMed

Susaeta, Andres; Adams, Damian C; Carter, Douglas R; Dwivedi, Puneet

2016-09-01

Forests provide myriad ecosystem services that are vital to humanity. With climate change, we expect to see significant changes to forests that will alter the supply of these critical services and affect human well-being. To better understand the impacts of climate change on forest-based ecosystem services, we applied a data envelopment analysis method to assess plot-level efficiency in the provision of ecosystem services in Florida natural loblolly pine (Pinus taeda L.) forests. Using field data for n = 16 loblolly pine forest plots, including inputs such as site index, tree density, age, precipitation, and temperatures for each forest plot, we assessed the relative plot-level production of three ecosystem services: timber, carbon sequestered, and species richness. The results suggested that loblolly pine forests in Florida were largely inefficient in the provision of these ecosystem services under current climatic conditions. Climate change had a small negative impact on the loblolly pine forests efficiency in the provision of ecosystem services. In this context, we discussed the reduction of tree density that may not improve ecosystem services production.

Climate Change and Ecosystem Services Output Efficiency in Southern Loblolly Pine Forests

NASA Astrophysics Data System (ADS)

Susaeta, Andres; Adams, Damian C.; Carter, Douglas R.; Dwivedi, Puneet

2016-09-01

Forests provide myriad ecosystem services that are vital to humanity. With climate change, we expect to see significant changes to forests that will alter the supply of these critical services and affect human well-being. To better understand the impacts of climate change on forest-based ecosystem services, we applied a data envelopment analysis method to assess plot-level efficiency in the provision of ecosystem services in Florida natural loblolly pine ( Pinus taeda L.) forests. Using field data for n = 16 loblolly pine forest plots, including inputs such as site index, tree density, age, precipitation, and temperatures for each forest plot, we assessed the relative plot-level production of three ecosystem services: timber, carbon sequestered, and species richness. The results suggested that loblolly pine forests in Florida were largely inefficient in the provision of these ecosystem services under current climatic conditions. Climate change had a small negative impact on the loblolly pine forests efficiency in the provision of ecosystem services. In this context, we discussed the reduction of tree density that may not improve ecosystem services production.

Genetic structure in striped skunks (Mephitis mephitis) on the southern high plains of Texas

USGS Publications Warehouse

Hansen, L.A.; Mathews, N.E.; Hansen, R.W.; Vander Lee, B. A.; Scott, Lutz R.

2003-01-01

Genetic variation within populations reflects population-level social and demographic processes and influences how a population behaves as an evolutionary unit. We examined partitioning of genetic variation in striped skunks (Mephitis mephitis) from the Southern High Plains of Texas during 1994-1995. Sixty-nine male and 35 female skunks were sampled on four 12.8-km2 study plots. Plot centers ranged from 17.6 to 61.6 km apart. We used multi-locus DNA fingerprinting with 2 probes, pV47 and CTTxAGG, to test 3 hypotheses: (1) females are more genetically similar to other females than males are to other males on the same plot (indicating greater female philopatry than male philopatry), (2) genetic similarity is greater within plots than among plots (indicating partitioning of genetic variation in space), and (3) genetic similarity of males decreases as the distance separating males increases (indicating geographic distance affects rates of gene flow). In general, males on a plot had lower average genetic similarity than females. Genetic similarity within plots was not different from genetic similarity among plots for males or for females. Genetic similarity of males did not decrease with increasing distance among plots. The lack of geographical genetic structure in striped skunks suggests at the scale of this study (<60 km) that gene flow of biparentally inherited genes is not distance-mediated. However, the higher similarity values for females than for males on the same plot supports an effect of male-biased dispersal and female philopatry on partitioning of genetic variation between sexes.

A UAS-based remote sensing platform for crop water stress detection

NASA Astrophysics Data System (ADS)

Zhang, H.; Wang, D.; Ayars, J. E.

2014-12-01

The remote detection of water stress in a biofuel crop field was investigated using canopy temperature measurements. An experimental trial was set up in the central valley of Maui, Hawaii, comprising different sugarcane varieties and irrigation regimes. An unmanned aerial system (UAS) was equipped with a FLIR A615 thermal camera to acquire canopy temperature imagery. Images were mosaicked and processed to show spatial temperature difference of entire field. A weather station was installed in a full irrigation plot to collect meteorological parameters. The sensitivity of canopy to air temperature difference and crop water stress index were investigated on detecting cop water stress levels. The results showed that low irrigation level treatment plots resulted in higher canopy temperatures compared to the high irrigation level treatment plots. Canopy temperatures also showed differences in water stress in different sugarcane varieties. The study demonstrated the feasibility of UAS-based thermal method to quantify plant water status of sugar canes used for biofuel crops.

Study of sediment movement in an irrigated maize-cotton system combining rainfall simulations, sediment tracers and soil erosion models

NASA Astrophysics Data System (ADS)

Guzmán, Gema; Laguna, Ana; Cañasveras, Juan Carlos; Boulal, Hakim; Barrón, Vidal; Gómez-Macpherson, Helena; Giráldez, Juan Vicente; Gómez, José Alfonso

2015-05-01

Although soil erosion is one of the main threats to agriculture sustainability in many areas of the world, its processes are difficult to measure and still need a better characterization. The use of iron oxides as sediment tracers, combined with erosion and mixing models opens up a pathway for improving the knowledge of the erosion and redistribution of soil, determining sediment sources and sinks. In this study, magnetite and a multivariate mixing model were used in rainfall simulations at the micro-plot scale to determine the source of the sediment at different stages of a furrow-ridge system both with (+T) and without (-T) wheel tracks. At a plot scale, magnetite, hematite and goethite combined with two soil erosion models based on the kinematic wave approach were used in a sprinkler irrigation test to study trends in sediment transport and tracer dynamics along furrow lengths under a wide range of scenarios. In the absence of any stubble cover, sediment contribution from the ridges was larger than the furrow bed one, almost 90%, while an opposite trend was observed with stubble, with a smaller contribution from the ridge (32%) than that of the bed, at the micro-plot trials. Furthermore, at a plot scale, the tracer concentration analysis showed an exponentially decreasing trend with the downstream distance both for sediment detachment along furrows and soil source contribution from tagged segments. The parameters of the distributed model KINEROS2 have been estimated using the PEST Model to obtain a more accurate evaluation. Afterwards, this model was used to simulate a broad range of common scenarios of topography and rainfall from commercial farms in southern Spain. Higher slopes had a significant influence on sediment yields while long furrow distances allowed a more efficient water use. For the control of runoff, and therefore soil loss, an equilibrium between irrigation design (intensity, duration, water pattern) and hydric needs of the crops should be defined in order to establish a sustainable management strategy.

Effects of open-field experimental warming on the growth of two-year-old Pinus densiflora and Abies holophylla seedlings

NASA Astrophysics Data System (ADS)

Han, S.; Son, Y.; Lee, S.; Jo, W.; Yoon, T.; Park, C.; Ko, S.; Kim, J.; Han, S.; Jung, Y.

2012-12-01

Temperature increase due to climate change is expected to affect tree growth and distribution [Way and Oren, 2010]. The responses of trees to warming vary with tree species, ontogenic stages, tree life forms, and biomes. Especially, seedling stage is a vulnerable period for tree survival and competition [Saxe et al., 2007] and thus research on effects of temperature increase on seedling stage is needed. We aimed to examine the responses of coniferous seedlings to future temperature increase by conducting an open-field warming experiment. An experimental warming set-up using infra-red heater was built in 2011 and the temperature in warming plots has been regulated to 3°C higher than that of control plots constantly. The seeds of Pinus densiflora and Abies holophylla were planted in each 1 m × 1 m plot (n=3) in April, 2012. Seedling growth, root collar diameter (RCD) and height of 45 individuals of each plot were measured in June and July, 2012. The survival rate of seedlings was also measured. Survival rate of P. densiflora was lower in warming plots (93.3%) than in control plots (100.0%, p<0.05) and that of A. holophylla was also decreased in warming plots (79.3%) than in control plots (97.0%, p<0.01). RCD and height of P. densiflora seedlings were not significantly different between control and warming plots, however, height of A. holophylla was significantly higher in warming plots in June and July (p<0.01). Comparatively, RCD of A. holophylla was only higher in control plots in June. While there is still a lack of case studies on the growth of seedlings under experimental warming, a few studies reported increased seedling growth [Yin et al., 2008] or and no difference [Han et al., 2009] in warming plots. Different responses of seedling growth between two species of the current study might be derived from species-specific acclimation to temperature increase and/or other limiting factors [Way and Oren, 2010]. This result is, to our knowledge, unprecedented and will contribute to the knowledge of species-specific growth response of tree species and to development of model predicting species distribution in future climate regime. Future work on physiological traits of seedlings and analysis on environmental factors will provide mechanism of seedling response to increased temperature. [This work was supported by 'Korea Forest Service (S111112L080110)'.

The role of deep nitrogen and dynamic rooting profiles on vegetation dynamics and productivity in response to permafrost thaw and climate change in Arctic tundra

NASA Astrophysics Data System (ADS)

Hewitt, R. E.; Helene, G.; Taylor, D. L.; McGuire, A. D.; Mack, M. C.

2017-12-01

The release of permafrost-derived nitrogen (N) has the potential to fertilize tundra vegetation, modulating plant competition, stimulating productivity, and offsetting carbon losses from thawing permafrost. Dynamic rooting, mycorrhizal interactions, and coupling of N availability and root N uptake have been identified as gaps in ecosystem models. As a first step towards understanding whether Arctic plants can access deep permafrost-derived N, we characterized rooting profiles and quantified acquisition of 15N tracer applied at the permafrost boundary by moist acidic tundra plants subjected to almost three decades of warming at Toolik Lake, Alaska. In the ambient control plots the vegetation biomass is distributed between five plant functional types (PFTs): sedges, evergreen and deciduous shrubs, mosses and in lower abundance, forbs. The warming treatment has resulted in the increase of deciduous shrub biomass and the loss of sedges, evergreen shrubs, and mosses. We harvested roots by depth increment down to the top of the permafrost. Roots were classified by size class and PFT. The average thaw depth in the warmed plots was 58.3 cm ± 6.4 S.E., close to 18 cm deeper than the average thaw depth in the ambient plots (40.8 cm ± 1.8 S.E.). Across treatments the deepest rooting species was Rubus chamaemorus (ambient 40.8 cm ± 1.8 S.E., warmed 50.3 cm ± 9.8 S.E.), a non-mycorrhizal forb, followed by Eriophorum vaginatum, a non-mycorrhizal sedge. Ectomycorrhizal deciduous and ericoid mycorrhizal evergreen shrubs were rooted at more shallow depths. Deeply rooted non-mycorrhizal species had the greatest uptake of 15N tracer within 24 hours across treatments. Tracer uptake was greatest for roots of E. vaginatum in ambient plots and R. chamaemorus in warmed plots. Root profiles were integrated into a process-based ecosystem model coupled with a dynamic vegetation model. Functions modeling dynamic rooting profile relative to thaw depth were implemented for each PFT. The goal of the model simulations is to evaluate the relative effect of deep N acquisition and dynamic rooting profile on site level vegetation productivity. This modeling exercise will contribute to more accurate predictions of vegetation change in the Arctic modulated by belowground plant traits and changing soil resources with warming.

Harvesting tree biomass at the stand level to assess the accuracy of field and airborne biomass estimation in savannas.

PubMed

Colgan, Matthew S; Asner, Gregory P; Swemmer, Tony

2013-07-01

Tree biomass is an integrated measure of net growth and is critical for understanding, monitoring, and modeling ecosystem functions. Despite the importance of accurately measuring tree biomass, several fundamental barriers preclude direct measurement at large spatial scales, including the facts that trees must be felled to be weighed and that even modestly sized trees are challenging to maneuver once felled. Allometric methods allow for estimation of tree mass using structural characteristics, such as trunk diameter. Savanna trees present additional challenges, including limited available allometry and a prevalence of multiple stems per individual. Here we collected airborne lidar data over a semiarid savanna adjacent to the Kruger National Park, South Africa, and then harvested and weighed woody plant biomass at the plot scale to provide a standard against which field and airborne estimation methods could be compared. For an existing airborne lidar method, we found that half of the total error was due to averaging canopy height at the plot scale. This error was eliminated by instead measuring maximum height and crown area of individual trees from lidar data using an object-based method to identify individual tree crowns and estimate their biomass. The best object-based model approached the accuracy of field allometry at both the tree and plot levels, and it more than doubled the accuracy compared to existing airborne methods (17% vs. 44% deviation from harvested biomass). Allometric error accounted for less than one-third of the total residual error in airborne biomass estimates at the plot scale when using allometry with low bias. Airborne methods also gave more accurate predictions at the plot level than did field methods based on diameter-only allometry. These results provide a novel comparison of field and airborne biomass estimates using harvested plots and advance the role of lidar remote sensing in savanna ecosystems.

Sound absorption coefficient in situ: an alternative for estimating soil loss factors.

PubMed

Freire, Rosane; Meletti de Abreu, Marco Henrique; Okada, Rafael Yuri; Soares, Paulo Fernando; GranhenTavares, Célia Regina

2015-01-01

The relationship between the sound absorption coefficient and factors of the Universal Soil Loss Equation (USLE) was determined in a section of the Maringá Stream basin, Paraná State, by using erosion plots. In the field, four erosion plots were built on a reduced scale, with dimensions of 2.0×12.5m. With respect to plot coverage, one was kept with bare soil and the others contained forage grass (Brachiaria), corn and wheat crops, respectively. Planting was performed without any type of conservation practice in an area with a 9% slope. A sedimentation tank was placed at the end of each plot to collect the material transported. For the acoustic system, pink noise was used in the measurement of the proposed monitoring, for collecting information on incident and reflected sound pressure levels. In general, obtained values of soil loss confirmed that 94.3% of material exported to the basin water came from the bare soil plot, 2.8% from the corn plot, 1.8% from the wheat plot, and 1.1% from the forage grass plot. With respect to the acoustic monitoring, results indicated that at 16kHz erosion plot coverage type had a significant influence on the sound absorption coefficient. High correlation coefficients were found in estimations of the A and C factors of the USLE, confirming that the acoustic technique is feasible for the determination of soil loss directly in the field. Copyright © 2014 Elsevier B.V. All rights reserved.

WEED SURVEYING OF PHACELIA (PHACELIA TANACETIFOLIA L.) AND EVALUATING THE EFFICIENCY OF THE WEED CONTROL.

PubMed

Horváth, E; Szabó, R

2014-01-01

The experiment was set up in an area of 9 ha that was split into 4 plots: in plot 1 the row spacing was 12 cm and the seeding rate was 10 kg; in plot 2 the row spacing was 24 cm and the seeding rate was 10 kg; in plot 3 the row spacing was 24 cm and the seeding rate was 8 kg; in plot 4 the row spacing was 12 cm and the seeding rate was 8 kg. After the weed surveying, the total weed coverage was established as follows: in plot 1 the total weed coverage was 11.34%, in plot 2 it was 12.3%, in plot 3 it was 18%, and in plot 4 the total weed coverage was 15%. Based on the weed survey, on the test area the following dicotyledon weeds belonging to the T4 Raunkiaer plant life-form category occupied the highest percentage: heal-all, black-bindweed, goosefoot. The proportion of the perennial dicotyledons: field bindweed (G3), tuberous pea (G1), white campion (H3) was negligible. In all four cases the weed control was executed using the same herbicide in the same doses and with regard to the weed species it showed the same level of efficiency. The smaller row spacing and higher seeding rate has a beneficial effect on the weed suppressing capacity of the crop, the crop's weed suppressing capacity is better and the development of the weeds becomes worse.

Predicting yellow toadflax infestations in the Flat Tops Wilderness of Colorado

USGS Publications Warehouse

Sutton, J.R.; Stohlgren, T.J.; Beck, K.G.

2007-01-01

Understanding species-environment relationships is important to predict the spread of non-native species. Yellow toadflax (Linaria vulgaris Mill.) is an invasive perennial recently found in the Flat Tops Wilderness of the White River National Forest on the western slope of the Colorado Rocky Mountains. We hypothesized yellow toadflax occurrence could be predicted from easily measured site characteristics. We used logistic regression with stepwise selection to generate a model to predict yellow toadflax occurrence on a particular plot based on that site's physical characteristics. The experimental design was a paired-plot study in two locations using circular 1,018-m2 plots. Sixty-eight plots that did not contain yellow toadflax and 65 plots that contained yellow toadflax were sampled at the Ripple Creek site in 1999. In 2000, 54 non-toadflax plots and 55 toadflax-containing plots were sampled in the Marvine Creek site. Site characteristics sampled included: vegetation type; under-canopy light level; slope; aspect; soil properties; presence of disturbance, trails, and/or water; and total species richness. A model that correctly classified >90% of the 242 plots sampled included two vegetation type parameters, the presence of trails, and total species richness. Yellow toadflax is most often found in areas that were open-canopy sites, along trails, and with higher species diversity plots (>23 species). This approach can be used for other species in other areas to rapidly identify areas vulnerable to invasion. ?? 2007 Springer Science+Business Media, Inc.

Effects of experimental overgrowth on survival and change in the turf assemblage of a giant kelp forest

USGS Publications Warehouse

Miles, A.K.; Meslow, E.C.

1990-01-01

Crustose coralline algae were the prevalent cover among sessile organisms that paved or grew near the substratum, and also the most commonly overgrown species in a giant kelp Macrocystis pyrifera (L.) C.A. Agardh forest located off San Nicolas Island, California. Giant kelp was the largest and most conspicuous species that overgrew large patches of the substrata; overgrowth among turf organisms also appeared common. To determine the effects of giant kelp holdfasts on crustose coralline algae and other turf organisms,'artificial holdfasts' were placed on 0.125-m2 plots for 5, 8 and 12 months. In these treatments, 50?57% of the crustose coralline algae survived. Because these algae also recruited while covered, the total cover (survivorship plus recruitment) differed by only 7?26% from that sampled at the start of the study. The decline of these algae in control plots was similar to that in the treatment plots mostly because of overgrowth by sessile invertebrates. Bryozoans increased markedly on the control plots, whereas 0?12% survived in the treatment plots. Bryozoans and sponges also recruited under the artificial holdfasts. Some arborescent turf algae survived in the 5- and 8-month treatments; articulated coralline algae survived better than did foliose algae. High survival recruitment of crustose coralline algae while overgrown contributed to their prevalence in benthic communities.

Invasive C4 Perennial Grass Alters Net Ecosystem Exchange in Mixed C3/C4 Savanna Grassland

NASA Astrophysics Data System (ADS)

Basham, T. S.; Litvak, M.

2006-12-01

The invasion of ecosystems by non-native plants that differ from native plants in physiological characteristics and phenology has the potential to alter ecosystem function. In Texas and other regions of the southern central plains of the United States, the introduced C4 perennial grass, Bothriochloa ischaemum, invades C3/C4 mixed grasslands and savannas, resulting in decreased plant community diversity (Gabbard 2003; Harmoney et al 2004). The objective of this study was to quantify how the conversion of these mixed grass communities to C4 dominated, B. ischaemum monocultures impacts carbon cycling and sequestration. Seasonal measurements of Net Ecosystem Exchange (NEE) of CO2, leaf level gas exchange and soil respiration were compared between savanna grassland plots composed of either naturally occurring B. ischaemum monocultures or native mixed grasses (n=16). NEE was measured using a closed system chamber that attached to permanently installed stainless steel bases. Temperature, soil moisture, aerial percent species cover and leaf area index were also monitored in plots to explain variability in measured responses. Results showed that NEE differed seasonally between invaded and native plots due to 1) greater leaf surface area per unit ground area in invaded plots, 2) differences in phenological patterns of plant activity and 3) differences in responses to water limitation between invaded and native plots. Cold season and summer drought NEE were driven primarily by belowground respiration in both plot types, however spring uptake activity commenced two months later in invaded plots. This later start in invaded plots was compensated for by greater uptake throughout the growing season and in particular during the drier summer months. Differences in NEE between plot types were not due to differences in soil respiration nor were they due to greater leaf level photosynthetic capabilities of B. ischaemum relative to the dominant native grasses. NEE, soil respiration and biomass accumulation were limited by temperature and soil moisture in both native and invaded plots; however, invaded areas were less sensitive to both higher temperatures and lower soil moisture. Preliminary modeling results suggest that from January-August 2006, invaded grasslands stored approximately one third more carbon than native grasslands, making them 20% less of a carbon source than native plots during this year of record high temperatures and drought. Gabbard, BL. 2003. The Population Dynamics and Distribution of the Exotic Grass,Bothriochloa ischaemum, PhD Dissertation, University of Texas, Austin, TX Harmoney et al. 2004. Herbicide Effects on Established Yellow Old World Bluestem (Bothriochloa ischaemum). Weed Technology 18:545 550

Contributions of algae to GPP and DOC production in an Alaskan fen: effects of historical water table manipulations on ecosystem responses to a natural flood.

PubMed

Wyatt, Kevin H; Turetsky, Merritt R; Rober, Allison R; Giroldo, Danilo; Kane, Evan S; Stevenson, R Jan

2012-07-01

The role of algae in the metabolism of northern peatlands is largely unknown, as is how algae will respond to the rapid climate change being experienced in this region. In this study, we examined patterns in algal productivity, nutrients, and dissolved organic carbon (DOC) during an uncharacteristically wet summer in an Alaskan rich fen. Our sampling was conducted in three large-scale experimental plots where water table position had been manipulated (including both drying and wetting plots and a control) for the previous 4 years. This study allowed us to explore how much ecosystem memory of the antecedent water table manipulations governed algal responses to natural flooding. Despite no differences in water table position between the manipulated plots at the time of sampling, algal primary productivity was consistently higher in the lowered water table plot compared to the control or raised water table plots. In all plots, algal productivity peaked immediately following seasonal maxima in nutrient concentrations. We found a positive relationship between algal productivity and water-column DOC concentrations (r (2) = 0.85, P < 0.001). Using these data, we estimate that algae released approximately 19% of fixed carbon into the water column. Algal exudates were extremely labile in biodegradability assays, decreasing by more than 55% within the first 24 h of incubation. We suggest that algae can be an important component of the photosynthetic community in boreal peatlands and may become increasingly important for energy flow in a more variable climate with more intense droughts and flooding.

Tides, and tidal and residual currents in Suisun and San Pablo bays, California; results of measurements, 1986

USGS Publications Warehouse

Gartner, J.W.; Yost, B.T.

1988-01-01

Current meter data collected at 11 stations and water level data collected at one station in Suisun and San Pablo Bays, California, in 1986 are compiled in this report. Current-meter measurements include current speed and direction, and water temperature and salinity (computed from temperature and conductivity). For each of the 19 current-meter records, data are presented in two forms. These are: (1) results of harmonic analysis; and (2) plots of tidal current speed and direction versus time and plots of temperature and salinity versus time. Spatial distribution of the properties of tidal currents are given in graphic form. In addition, Eulerian residual currents have been compiled by using a vector-averaging technique. Water level data are presented in the form of a time-series plot and the results of harmonic analysis. (USGS)

Management of the potato cyst nematode (Globodera pallida) with bio-fumigants/stimulants.

PubMed

Martin, T J G; Turner, S J; Fleming, C C

2007-01-01

Field trials evaluated the effect of four plant-based bio-fumigants/stimulants on population levels of G. pallida and the resulting potato yields and quality. Three formulations contained seaweed biostimulants (Algifol, Nutridip and Metastim) and one bio-fumigant containing mustard and chilli pepper extracts (Dazitol). These were compared with the fumigant nematicide Nemathorin and untreated control plots. The effect of G. pallida on growing potato crops was assessed by recording haulm characteristics which indicated that the nematicide treatment gave most protection. Levels of PCN juveniles and migratory nematodes were assessed during the trial. Plots treated with Nemathorin and Dazitol had fewest PCN, whilst the highest number of migratory nematodes occurred in fallow plots. Sixteen weeks after planting the nematicide treatment produced highest yield and tuber numbers. Dazitol treatment produced a lower yield but the largest tubers.

Overland flow connectivity on planar patchy hillslopes - modified percolation theory approaches and combinatorial model of urns

NASA Astrophysics Data System (ADS)

Nezlobin, David; Pariente, Sarah; Lavee, Hanoch; Sachs, Eyal

2017-04-01

Source-sink systems are very common in hydrology; in particular, some land cover types often generate runoff (e.g. embedded rocks, bare soil) , while other obstruct it (e.g. vegetation, cracked soil). Surface runoff coefficients of patchy slopes/plots covered by runoff generating and obstructing covers (e.g., bare soil and vegetation) depend critically on the percentage cover (i.e. sources/sinks abundance) and decrease strongly with observation scale. The classic mathematical percolation theory provides a powerful apparatus for describing the runoff connectivity on patchy hillslopes, but it ignores strong effect of the overland flow directionality. To overcome this and other difficulties, modified percolation theory approaches can be considered, such as straight percolation (for the planar slopes), quasi-straight percolation and models with limited obstruction. These approaches may explain both the observed critical dependence of runoff coefficients on percentage cover and their scale decrease in systems with strong flow directionality (e.g. planar slopes). The contributing area increases sharply when the runoff generating percentage cover approaches the straight percolation threshold. This explains the strong increase of the surface runoff and erosion for relatively low values (normally less than 35%) of the obstructing cover (e.g., vegetation). Combinatorial models of urns with restricted occupancy can be applied for the analytic evaluation of meaningful straight percolation quantities, such as NOGA's (Non-Obstructed Generating Area) expected value and straight percolation probability. It is shown that the nature of the cover-related runoff scale decrease is combinatorial - the probability for the generated runoff to avoid obstruction in unit area decreases with scale for the non-trivial percentage cover values. The magnitude of the scale effect is found to be a skewed non-monotonous function of the percentage cover. It is shown that the cover-related scale effect becomes less prominent if the obstructing capacity decreases, as generally occurs during heavy rainfalls. The plot width have a moderate positive statistical effect on runoff and erosion coefficients, since wider patchy plots have, on average, a greater normalized contributing area and a higher probability to have runoff of a certain length. The effect of plot width depends by itself on the percentage cover, plot length, and compared width scales. The contributing area uncertainty brought about by cover spatial arrangement is examined, including its dependence on the percentage cover and scale. In general, modified percolation theory approaches and combinatorial models of urns with restricted occupancy may link between critical dependence of runoff on percentage cover, cover-related scale effect, and statistical uncertainty of the observed quantities.

Using US Forest Inventory (FIA) Data to Test for Growth Enhancement

NASA Astrophysics Data System (ADS)

Masek, J. G.; Collatz, G. J.; Williams, C. A.

2015-12-01

It is recognized that land ecosystems sequester a significant fraction of anthropogenic carbon emissions, and that the magnitude of the "land sink" appears to be increasing through time. This observation has led to the hypothesis that forest ecosystems are experiencing more rapid growth than their historical norm, due to some combination of CO2 fertilization, longer growing seasons, nitrogen deposition, and more intensive management. Direct evidence for growth enhancment has been reported from experimental plots, where long-term (historical) rates of biomass accumulation appear lower than contemporary rates derived from remeasurement of individual trees. However, the approach has not been pursued at a national scale. Since the late 1990's the US Forest Inventory and Analysis (FIA) program has standardized plot locations across the United States, and has systematically remeasured tree and plot attributes on 5-year (east) or 10-year (west) cycles. In principle, these remeasured plots provide a robust dataset for comparing contemporary and historical growth rates. In this talk we review approaches for performing this comparison at both plot and tree scales. We find that recent plot-level biomass accumulation rates from the eastern US do show more rapid growth than would be expected from historical biomass-age curves, with enhancement factors of up 2x. However, the implicit inclusion of "cryptic" or older disturbances in the historical curves hinders a definitive interpretation. Stand-level age-biomass simulations confirm that disturbance events must be included in the remeasured data set in order to provide comparability with historical curves. Remeasured DBH measurements from individual trees may provide a more robust approach for examining the issue.

Effects of spatial heterogeneity on butterfly species richness in Rocky Mountain National Park, CO, USA

USGS Publications Warehouse

Kumar, S.; Simonson, S.E.; Stohlgren, T.J.

2009-01-01

We investigated butterfly responses to plot-level characteristics (plant species richness, vegetation height, and range in NDVI [normalized difference vegetation index]) and spatial heterogeneity in topography and landscape patterns (composition and configuration) at multiple spatial scales. Stratified random sampling was used to collect data on butterfly species richness from seventy-six 20 ?? 50 m plots. The plant species richness and average vegetation height data were collected from 76 modified-Whittaker plots overlaid on 76 butterfly plots. Spatial heterogeneity around sample plots was quantified by measuring topographic variables and landscape metrics at eight spatial extents (radii of 300, 600 to 2,400 m). The number of butterfly species recorded was strongly positively correlated with plant species richness, proportion of shrubland and mean patch size of shrubland. Patterns in butterfly species richness were negatively correlated with other variables including mean patch size, average vegetation height, elevation, and range in NDVI. The best predictive model selected using Akaike's Information Criterion corrected for small sample size (AICc), explained 62% of the variation in butterfly species richness at the 2,100 m spatial extent. Average vegetation height and mean patch size were among the best predictors of butterfly species richness. The models that included plot-level information and topographic variables explained relatively less variation in butterfly species richness, and were improved significantly after including landscape metrics. Our results suggest that spatial heterogeneity greatly influences patterns in butterfly species richness, and that it should be explicitly considered in conservation and management actions. ?? 2008 Springer Science+Business Media B.V.

Shading effect on generative characters of upland red rice of Southeast Sulawesi, Indonesia

NASA Astrophysics Data System (ADS)

Muhidin; Syam’un, E.; Kaimuddin; Musa, Y.; Sadimantara, G. R.; Usman; Leomo, S.; Rakian, T. C.

2018-05-01

Upland red rice (Oryza sativa) contains anthocyanin, a phenolic compounds that can act as antioxidants and functional food for human dietary. The content of functional food on upland red rice is influenced by shading condition, but the production is also influenced by environmental condition, especially the availability of light. The study aims is to assess and analyze the effect of shade on the growth and production of upland red rice. The research was conducted using the quantitative method to obtain the optimal shading condition that can increase the rice anthocyanin content and relatively high production. The research was arranged in split plot design, with shade as main plot and the different of cultivar as sub plot with three replications. The shading treatment consist of 4 levels as follows: n1=shade level < 25 %, n2=shade level 25-50%, n3=shade level 50-75% and n4=shade level > 75%. The cultivar tested were (v1) = Labandiri, (v2) = Jangkobembe, (v3) = Ranggohitam, and (v4) = Paedara. The rice planted in between teak wood trees with different age and level of canopy. The research reveals that shades had an effect in decreasing plant production (the higher level of shade, the higher the decrease level of production), but the shades can improve the quality of red rice through the increase of anthocyanin content.

Factors affecting hydrogen-tunneling contribution in hydroxylation reactions promoted by oxoiron(IV) porphyrin π-cation radical complexes.

PubMed

Cong, Zhiqi; Kinemuchi, Haruki; Kurahashi, Takuya; Fujii, Hiroshi

2014-10-06

Hydrogen atom transfer with a tunneling effect (H-tunneling) has been proposed to be involved in aliphatic hydroxylation reactions catalyzed by cytochrome P450 and synthetic heme complexes as a result of the observation of large hydrogen/deuterium kinetic isotope effects (KIEs). In the present work, we investigate the factors controlling the H-tunneling contribution to the H-transfer process in hydroxylation reaction by examining the kinetics of hydroxylation reactions at the benzylic positions of xanthene and 1,2,3,4-tetrahydronaphthalene by oxoiron(IV) 5,10,15,20-tetramesitylporphyrin π-cation radical complexes ((TMP(+•))Fe(IV)O(L)) under single-turnover conditions. The Arrhenius plots for these hydroxylation reactions of H-isotopomers have upwardly concave profiles. The Arrhenius plots of D-isotopomers, clear isosbestic points, and product analysis rule out the participation of thermally dependent other reaction processes in the concave profiles. These results provide evidence for the involvement of H-tunneling in the rate-limiting H-transfer process. These profiles are simulated using an equation derived from Bell's tunneling model. The temperature dependence of the KIE values (k(H)/k(D)) determined for these reactions indicates that the KIE value increases as the reaction temperature becomes lower, the bond dissociation energy (BDE) of the C-H bond of a substrate becomes higher, and the reactivity of (TMP(+•))Fe(IV)O(L) decreases. In addition, we found correlation of the slope of the ln(k(H)/k(D)) - 1/T plot and the bond strengths of the Fe═O bond of (TMP(+•))Fe(IV)O(L) estimated from resonance Raman spectroscopy. These observations indicate that these factors modulate the extent of the H-tunneling contribution by modulating the ratio of the height and thickness of the reaction barrier.

Species-area curves indicate the importance of habitats' contributions to regional biodiversity

USGS Publications Warehouse

Chong, G.W.; Stohlgren, T.J.

2007-01-01

We examined species-area curves, species composition and similarity (Jaccard's coefficients), and species richness in 17 vegetation types to develop a composite index of a vegetation type's contribution to regional species richness. We collected data from 1 to 1000 m2 scales in 147 nested plots in Rocky Mountain National Park, Colorado, USA to compare three species-area curve models' abilities to estimate the number of species observed in each vegetation type. The log(species)-log(area) curve had the largest adjusted coefficients of determination (r2 values) in 12 of the 17 types, followed by the species-log(area) curve with five of the highest values. When the slopes of the curves were corrected for species overlap among plots with Jaccard's coefficients, the species-log(area) curves estimated values closest to those observed. We combined information from species-area curves and measures of heterogeneity with information on the area covered by each vegetation type and found that the types making the greatest contributions to regional biodiversity covered the smallest areas. This approach may provide an accurate and relatively rapid way to rank hotspots of plant diversity within regions of interest.

Population ecology of the gulf ribbed mussel across a salinity gradient: recruitment, growth and density

USGS Publications Warehouse

Honig, Aaron; Supan, John; LaPeyre, Megan K.

2015-01-01

Benthic intertidal bivalves play an essential role in estuarine ecosystems by contributing to habitat provision, water filtration, and promoting productivity. As such, changes that impact population distributions and persistence of local bivalve populations may have large ecosystem level consequences. Recruitment, growth, mortality, population size structure and density of the gulf coast ribbed mussel, Geukensia granosissima, were examined across a salinity gradient in southeastern Louisiana. Data were collected along 100-m transects at interior and edge marsh plots located at duplicate sites in upper (salinity ~4 psu), central (salinity ~8 psu) and lower (salinity ~15 psu) Barataria Bay, Louisiana, U.S.A. Growth, mortality and recruitment were measured in established plots from April through November 2012. Mussel densities were greatest within the middle bay (salinity ~8) regardless of flooding regime, but strongly associated with highest stem densities of Juncus roemerianus vegetation. Mussel recruitment, growth, size and survival were significantly higher at mid and high salinity marsh edge sites as compared to all interior marsh and low salinity sites. The observed patterns of density, growth and mortality in Barataria Bay may reflect detrital food resource availability, host vegetation community distribution along the salinity gradient, salinity tolerance of the mussel, and reduced predation at higher salinity edge sites.

Herbivory and eutrophication mediate grassland plant nutrient responses across a global climatic gradient.

PubMed

Anderson, T Michael; Griffith, Daniel M; Grace, James B; Lind, Eric M; Adler, Peter B; Biederman, Lori A; Blumenthal, Dana M; Daleo, Pedro; Firn, Jennifer; Hagenah, Nicole; Harpole, W Stanley; MacDougall, Andrew S; McCulley, Rebecca L; Prober, Suzanne M; Risch, Anita C; Sankaran, Mahesh; Schütz, Martin; Seabloom, Eric W; Stevens, Carly J; Sullivan, Lauren L; Wragg, Peter D; Borer, Elizabeth T

2018-04-01

Plant stoichiometry, the relative concentration of elements, is a key regulator of ecosystem functioning and is also being altered by human activities. In this paper we sought to understand the global drivers of plant stoichiometry and compare the relative contribution of climatic vs. anthropogenic effects. We addressed this goal by measuring plant elemental (C, N, P and K) responses to eutrophication and vertebrate herbivore exclusion at eighteen sites on six continents. Across sites, climate and atmospheric N deposition emerged as strong predictors of plot-level tissue nutrients, mediated by biomass and plant chemistry. Within sites, fertilization increased total plant nutrient pools, but results were contingent on soil fertility and the proportion of grass biomass relative to other functional types. Total plant nutrient pools diverged strongly in response to herbivore exclusion when fertilized; responses were largest in ungrazed plots at low rainfall, whereas herbivore grazing dampened the plant community nutrient responses to fertilization. Our study highlights (1) the importance of climate in determining plant nutrient concentrations mediated through effects on plant biomass, (2) that eutrophication affects grassland nutrient pools via both soil and atmospheric pathways and (3) that interactions among soils, herbivores and eutrophication drive plant nutrient responses at small scales, especially at water-limited sites. © 2018 by the Ecological Society of America.

Spatial scale and sampling resolution affect measures of gap disturbance in a lowland tropical forest: implications for understanding forest regeneration and carbon storage.

PubMed

Lobo, Elena; Dalling, James W

2014-03-07

Treefall gaps play an important role in tropical forest dynamics and in determining above-ground biomass (AGB). However, our understanding of gap disturbance regimes is largely based either on surveys of forest plots that are small relative to spatial variation in gap disturbance, or on satellite imagery, which cannot accurately detect small gaps. We used high-resolution light detection and ranging data from a 1500 ha forest in Panama to: (i) determine how gap disturbance parameters are influenced by study area size, and the criteria used to define gaps; and (ii) to evaluate how accurately previous ground-based canopy height sampling can determine the size and location of gaps. We found that plot-scale disturbance parameters frequently differed significantly from those measured at the landscape-level, and that canopy height thresholds used to define gaps strongly influenced the gap-size distribution, an important metric influencing AGB. Furthermore, simulated ground surveys of canopy height frequently misrepresented the true location of gaps, which may affect conclusions about how relatively small canopy gaps affect successional processes and contribute to the maintenance of diversity. Across site comparisons need to consider how gap definition, scale and spatial resolution affect characterizations of gap disturbance, and its inferred importance for carbon storage and community composition.

Design of a factorial experiment with randomization restrictions to assess medical device performance on vascular tissue.

PubMed

Diestelkamp, Wiebke S; Krane, Carissa M; Pinnell, Margaret F

2011-05-20

Energy-based surgical scalpels are designed to efficiently transect and seal blood vessels using thermal energy to promote protein denaturation and coagulation. Assessment and design improvement of ultrasonic scalpel performance relies on both in vivo and ex vivo testing. The objective of this work was to design and implement a robust, experimental test matrix with randomization restrictions and predictive statistical power, which allowed for identification of those experimental variables that may affect the quality of the seal obtained ex vivo. The design of the experiment included three factors: temperature (two levels); the type of solution used to perfuse the artery during transection (three types); and artery type (two types) resulting in a total of twelve possible treatment combinations. Burst pressures of porcine carotid and renal arteries sealed ex vivo were assigned as the response variable. The experimental test matrix was designed and carried out as a split-plot experiment in order to assess the contributions of several variables and their interactions while accounting for randomization restrictions present in the experimental setup. The statistical software package SAS was utilized and PROC MIXED was used to account for the randomization restrictions in the split-plot design. The combination of temperature, solution, and vessel type had a statistically significant impact on seal quality. The design and implementation of a split-plot experimental test-matrix provided a mechanism for addressing the existing technical randomization restrictions of ex vivo ultrasonic scalpel performance testing, while preserving the ability to examine the potential effects of independent factors or variables. This method for generating the experimental design and the statistical analyses of the resulting data are adaptable to a wide variety of experimental problems involving large-scale tissue-based studies of medical or experimental device efficacy and performance.

Effects of MON810 Bt field corn on adult emergence of Helicoverpa zea (Lepidoptera: Noctuidae).

PubMed

Horner, T A; Dively, G P; Herbert, D A

2003-06-01

A 3-yr study (1996-1998) was conducted to evaluate the effects of MON810 Bt corn on Helicoverpa zea (Boddie) emergence and to determine whether delayed larval development as a result of Bt intoxication results in higher levels of diapause induction and pupal mortality. In the 1997 study, there was no difference in prepupal mortality between corn types, although significantly more prepupae from Bt plots than from non-Bt plots died in emergence buckets before constructing pupal chambers in 1998. In all years, significantly fewer moths emerged from prepupae collected from Bt plots, suggesting that effects of the expressed Cry1Ab extended to the prepupal and pupal stages. Late plantings of corn showed the greatest reductions in moth emergence from Bt corn because environmental conditions were more conducive to trigger diapause at the time H. zea was developing in these plantings. This was supported by a significantly greater proportion of diapausing pupae remaining in the ground in the late plantings of both Bt and non-Bt corn. For April and early May plantings, larval feeding on Bt corn delayed the time to pupation, although there was no significant difference in moth emergence between corn types for those larvae that successfully pupated. Although Bt expression had less impact on the proportion of moths emerging, the actual number of moths emerging from Bt corn was significantly reduced because fewer larvae reached pupation. Delays in adult emergence, along with significant reductions in adult emergence from MON810 Bt corn, should reduce the rates of colonization in soybean and other late host crops but may also result in asynchrony of mating between individuals emerging from Bt and non-Bt corn. This, in turn, may contribute to the evolution of resistance to Bt corn.

Guidance for deriving and presenting percentage study weights in meta-analysis of test accuracy studies.

PubMed

Burke, Danielle L; Ensor, Joie; Snell, Kym I E; van der Windt, Danielle; Riley, Richard D

2018-06-01

Percentage study weights in meta-analysis reveal the contribution of each study toward the overall summary results and are especially important when some studies are considered outliers or at high risk of bias. In meta-analyses of test accuracy reviews, such as a bivariate meta-analysis of sensitivity and specificity, the percentage study weights are not currently derived. Rather, the focus is on representing the precision of study estimates on receiver operating characteristic plots by scaling the points relative to the study sample size or to their standard error. In this article, we recommend that researchers should also provide the percentage study weights directly, and we propose a method to derive them based on a decomposition of Fisher information matrix. This method also generalises to a bivariate meta-regression so that percentage study weights can also be derived for estimates of study-level modifiers of test accuracy. Application is made to two meta-analyses examining test accuracy: one of ear temperature for diagnosis of fever in children and the other of positron emission tomography for diagnosis of Alzheimer's disease. These highlight that the percentage study weights provide important information that is otherwise hidden if the presentation only focuses on precision based on sample size or standard errors. Software code is provided for Stata, and we suggest that our proposed percentage weights should be routinely added on forest and receiver operating characteristic plots for sensitivity and specificity, to provide transparency of the contribution of each study toward the results. This has implications for the PRISMA-diagnostic test accuracy guidelines that are currently being produced. Copyright © 2017 John Wiley & Sons, Ltd.

Diameter growth of upland oaks after thinning

Treesearch

Donald E. Hilt

1979-01-01

Diameter growth rates of the 40 largest trees per acre on 154 permanent plots in Kentucky, Ohio, Missouri, and Iowa were analyzed to determine the effects of thinning in upland oak stands. The plots were established over a wide range of stocking levels, stand age, and site conditions. Thinning resulted in increased diameter growth of the residual trees, regardless of...

Nearest neighbor imputation of species-level, plot-scale forest structure attributes from LiDAR data

Treesearch

Andrew T. Hudak; Nicholas L. Crookston; Jeffrey S. Evans; David E. Hall; Michael J. Falkowski

2008-01-01

Meaningful relationships between forest structure attributes measured in representative field plots on the ground and remotely sensed data measured comprehensively across the same forested landscape facilitate the production of maps of forest attributes such as basal area (BA) and tree density (TD). Because imputation methods can efficiently predict multiple response...

Fire Behavior (FB)

Treesearch

Robert E. Keane

2006-01-01

The Fire Behavior (FB) method is used to describe the behavior of the fire and the ambient weather and fuel conditions that influence the fire behavior. Fire behavior methods are not plot based and are collected by fire event and time-date. In general, the fire behavior data are used to interpret the fire effects documented in the plot-level sampling. Unlike the other...

Supporting document for the historical tank content estimate for AX-tank farm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brevick, C.H., Westinghouse Hanford

This Supporting Document provides historical in-depth characterization information on AX-Tank Farm, such as historical waste transfer and level data, tank physical information,temperature plots, liquid observation well plots, chemical analyte and radionuclide inventories for the Historical Tank Content Estimate Report for the northeast quadrant of the Hanford 200 East Area.

Assessing heterogeneity in soil nitrogen cycling: a plot-scale approach

Treesearch

Peter Baas; Jacqueline E. Mohan; David Markewitz; Jennifer D. Knoepp

2014-01-01

The high level of spatial and temporal heterogeneity in soil N cycling processes hinders our ability to develop an ecosystem-wide understanding of this cycle. This study examined how incorporating an intensive assessment of spatial variability for soil moisture, C, nutrients, and soil texture can better explain ecosystem N cycling at the plot scale. Five sites...

Path Analysis and Residual Plotting as Methods of Environmental Scanning in Higher Education: An Illustration with Applications and Enrollments.

ERIC Educational Resources Information Center

Morcol, Goktug; McLaughlin, Gerald W.

1990-01-01

The study proposes using path analysis and residual plotting as methods supporting environmental scanning in strategic planning for higher education institutions. Path models of three levels of independent variables are developed. Dependent variables measuring applications and enrollments at Virginia Polytechnic Institute and State University are…

Realized gains from block-plot coastal Douglas-fir trials in the northern Oregon Cascades

Treesearch

Terrence Z. Ye; Keith J.S. Jayawickrama; J. Bradley St. Clair

2010-01-01

Realized gains for coastal Douglas-fir (Pseudotsuga menziesii var. menziesii) were evaluated using data collected from 15-year-old trees from five field trials planted in large block plots in the northern Oregon Cascades. Three populations with different genetic levels (elite--high predicted gain; intermediate--moderate predicted gain; and an...

DOE Office of Scientific and Technical Information (OSTI.GOV)

Steed, Chad Allen

EDENx is a multivariate data visualization tool that allows interactive user driven analysis of large-scale data sets with high dimensionality. EDENx builds on our earlier system, called EDEN to enable analysis of more dimensions and larger scale data sets. EDENx provides an initial overview of summary statistics for each variable in the data set under investigation. EDENx allows the user to interact with graphical summary plots of the data to investigate subsets and their statistical associations. These plots include histograms, binned scatterplots, binned parallel coordinate plots, timeline plots, and graphical correlation indicators. From the EDENx interface, a user can selectmore » a subsample of interest and launch a more detailed data visualization via the EDEN system. EDENx is best suited for high-level, aggregate analysis tasks while EDEN is more appropriate for detail data investigations.« less

NPLOT: an Interactive Plotting Program for NASTRAN Finite Element Models

NASA Technical Reports Server (NTRS)

Jones, G. K.; Mcentire, K. J.

1985-01-01

The NPLOT (NASTRAN Plot) is an interactive computer graphics program for plotting undeformed and deformed NASTRAN finite element models. Developed at NASA's Goddard Space Flight Center, the program provides flexible element selection and grid point, ASET and SPC degree of freedom labelling. It is easy to use and provides a combination menu and command driven user interface. NPLOT also provides very fast hidden line and haloed line algorithms. The hidden line algorithm in NPLOT proved to be both very accurate and several times faster than other existing hidden line algorithms. A fast spatial bucket sort and horizon edge computation are used to achieve this high level of performance. The hidden line and the haloed line algorithms are the primary features that make NPLOT different from other plotting programs.

Durability of Drainage Improvement by Combination of Main Drain and Trench Drains with Vertical Drains in Clayey Field Converted from Paddy to Upland Use

NASA Astrophysics Data System (ADS)

Adachi, Kazuhide; Ohno, Satoshi; Furuhata, Masami; Ogura, Chikara; Tanimoto, Takeshi

The drainage efficiency of a subsurface drainage system for avoidance of standing water on the plow pan of clayey field was evaluated. A subsurface drainage system with a main drain and orthogonally adjoined rice husk trench drains joined by vertical rice husk drains was constructed on a test plot and compared to an identical control plot of paddy field converted to upland use under soybean cultivation. The ratio of total underdrain discharge to rainfall in the improved plot greatly increased over two years compared to that in a control plot. In the improved plot, the peak underdrain discharge per hour associated with some heavy rainfalls was around 3 mm/h in the first year but decreased to about 2 mm/h in the second year. By improving drainage in the paddy field, standing water on the plow pan was quickly eliminated after rain events and the period of flooding on the plow pan during the soybean growing season was greatly reduced. However, underdrain discharge in the improved plot decreased greatly in the third year to be at the same level as in the control plot, and rain water flooded the plow pan for extended periods of time.

Carbon and nitrogen loss during initial erosion processes under litter cover

NASA Astrophysics Data System (ADS)

Seitz, Steffen; Goebes, Philipp; Kühn, Peter; Scholten, Thomas

2013-04-01

Soil erosion translocates carbon (C) and nitrogen (N) from the soil pool. In natural or near-natural ecosystems like forests the soil is usually covered by litter. It can be assumed that litter decomposition and dust particles adhered on the surface of the leaves contribute to C and N fluxes during erosion processes as well. To our knowledge, the contribution of these compartments to the C and N balance of soil erosion is not yet known. As part of the "New Integrated Litter Experiment" within the DFG research unit "Biodiversity and Ecosystem Functioning (BEF)-China" we conducted a rainfall simulation experiment to quantify the role of litter cover for C and N fluxes during soil erosion in subtropical China. 96 mini runoff plots (40cm x 40cm) were established and divided into four blocks, two of them replicates. Seven different domestic litter species were used in this study combined to 1-species, 2-species and 4-species mixtures and complemented by none species plots (bare ground). Erosion processes were initiated by artificial rainfall using a rainfall simulator with a continuous and stable intensity of 60 mm/h. Sediment discharge and runoff volume were measured every 5 minutes for 20 minutes of rainfall duration and filtrated in the laboratory. Two time steps of rainfall simulation were carried out (summer 2012 and autumn 2012). Total C and N content were quantified from the solid sediment and the liquid runoff volume. Leaf decomposition rates were calculated based on the mass, leaf litter coverage was measured and loss of C and N contents from the decomposing leaves were provided by other project members. Additionally, C and N content of corresponding soils were designated. Lab work and statistical analysis are still ongoing. First results show that C and N concentrations of runoff and sediment are slightly higher for plots covered by litter than bare plots during the first run in summer 2012. It seems that 4-species plots have the highest C and N flux during rainfall simulation. Further analysis will focus on the role of litter diversity on C and N concentration and fluxes during initial erosion processes.

The Role of Mycorrhizal Associations in Controlling Biogenic Volatile Organic Carbon Flux From a Temperate Deciduous Forest

NASA Astrophysics Data System (ADS)

Cook, A. A.; Trowbridge, A.; Jacobs, L. M.; Stoy, P. C.; Stevens, P. S.; Phillips, R.

2016-12-01

The sources of and controls over biogenic volatile organic compound (bVOC) fluxes between terrestrial ecosystems and the atmosphere remains poorly understood. Ecosystem bVOC flux models rarely include contributions from leaf litter and soils despite recent findings demonstrating that they can be nontrivial components of total ecosystem bVOC flux. Other recent studies have demonstrated the central role of arbuscular (AM) versus ectomycorrhizal (ECM) fungi in determining litter quality and soil biogeochemistry. Here, we quantify the role of mycorrhizal associations in controlling soil and leaf litter bVOC flux during the growing to non-growing season transition at the Morgan Monroe State Forest Ameriflux Core research site in Indiana, USA. We hypothesize that (1) total bVOC emissions will be greater from ECM plots due to larger belowground microbial biomass, and (2) fast-decomposing litter within the AM-dominated plots will result in an ephemeral pulse in bVOC emissions later in the season. AM and ECM-dominated forest soils were a net bVOC sink early in the growing season following leaf-out, but were net sources during the leaf-fall period in October. In the absence of leaf litter, soils dominated by ECM were a large sink of bVOCs, but leaf litter inputs resulted in a net source, suggesting that leaf litter and not merely soil microbial biomass is critical for understanding hypothesis (1). Temperature explains 57% (21%) of the variability of methanol flux - the bVOC of greatest quantity - in ECM (AM)-dominated plots. Non-methanol bVOC flux is only related to soil temperature in the Fall in ECM-dominated plots, where it explains 71% of the variability. Results are consistent with large methanol efflux with fresh litter after leaf-fall, especially in ECM plots (contrary to hypothesis 2), but net uptake with strong temperature-dependence during the growing season. Seasonality, phenology (including leaf litter dynamics) and mycorrhizal associations should be taken into account to accurately determine the relative contribution of forest soils to ecosystem bVOC fluxes in temperate forests and their sensitivity to environmental drivers.

Regional variability in dust-on-snow processes and impacts in the Upper Colorado River Basin

USGS Publications Warehouse

Skiles, S. McKenzie; Painter, Thomas H.; Belnap, Jayne; Holland, Lacey; Reynolds, Richard L.; Goldstein, Harland L.; Lin, J.

2015-01-01

Dust deposition onto mountain snow cover in the Upper Colorado River Basin frequently occurs in the spring when wind speeds and dust emission peaks on the nearby Colorado Plateau. Dust loading has increased since the intensive settlement in the western USA in the mid 1880s. The effects of dust-on-snow have been well studied at Senator Beck Basin Study Area (SBBSA) in the San Juan Mountains, CO, the first high-altitude area of contact for predominantly southwesterly winds transporting dust from the southern Colorado Plateau. To capture variability in dust transport from the broader Colorado Plateau and dust deposition across a larger area of the Colorado River water sources, an additional study plot was established in 2009 on Grand Mesa, 150 km to the north of SBBSA in west central, CO. Here, we compare the 4-year (2010–2013) dust source, deposition, and radiative forcing records at Grand Mesa Study Plot (GMSP) and Swamp Angel Study Plot (SASP), SBBSA's subalpine study plot. The study plots have similar site elevations/environments and differ mainly in the amount of dust deposited and ensuing impacts. At SASP, end of year dust concentrations ranged from 0.83 mg g−1 to 4.80 mg g−1, and daily mean spring dust radiative forcing ranged from 50–65 W m−2, advancing melt by 24–49 days. At GMSP, which received 1.0 mg g−1 less dust per season on average, spring radiative forcings of 32–50 W m−2 advanced melt by 15–30 days. Remote sensing imagery showed that observed dust events were frequently associated with dust emission from the southern Colorado Plateau. Dust from these sources generally passed south of GMSP, and back trajectory footprints modelled for observed dust events were commonly more westerly and northerly for GMSP relative to SASP. These factors suggest that although the southern Colorado Plateau contains important dust sources, dust contributions from other dust sources contribute to dust loading in this region, and likely account for the majority of dust loading at GMSP.

Serum hepcidin-25 may replace the ferritin index in the Thomas plot in assessing iron status in anemic patients.

PubMed

Thomas, C; Kobold, U; Balan, S; Roeddiger, R; Thomas, L

2011-04-01

Biochemical markers of iron deficiency do not distinguish iron-deficient anemia (IDA) from the anemia of chronic disease (ACD) and the combined state of ACD/IDA. Serum hepcidin-25 might be a marker resolving this problem. We investigated the extent to which serum hepcidin-25 enables the differentiation of the states above in comparison with the ferritin index plot, the so-called Thomas plot [soluble transferrin receptor (sTfR)/log ferritin and the reticulocyte hemoglobin content (CHr)]. Serum hepcidin-25 was determined in 155 anemic patients who were classified as having latent iron deficiency (latent ID), IDA, ACD, or ACD/IDA using the ferritin index plot (Thomas plot). Hepcidin-25 was determined using an isotope-dilution micro-HPLC-tandem mass spectrometry method. The ability to discriminate among these states based on serum hepcidin-25 alone or in combination with the CHr was evaluated in a receiver operating characteristic curve analysis and a comparison with the recently established ferritin index plot. Serum hepcidin-25 correlated with ferritin and the ferritin index. Use of a hepcidin-25 cutoff level of ≤4 nmol/l allowed the differentiation of IDA from ACD and ACD/IDA. Furthermore, the discrimination of ACD/IDA from ACD required combination with CHr in a new plot (hepcidin-25 and the CHr). The hepcidin-25 plot and the ferritin index plot showed a good correspondence in the differentiation of iron states in patients with anemia. Patients with IDA can be differentiated from ACD and ACD/IDA but not ACD from ACD/IDA based on hepcidin-25 alone. The combination of hepcidin-25 with CHr in the hepcidin-25 plot was useful for the differentiation of the states above. © 2010 Blackwell Publishing Ltd.

Performance of dense digital surface models based on image matching in the estimation of plot-level forest variables

NASA Astrophysics Data System (ADS)

Nurminen, Kimmo; Karjalainen, Mika; Yu, Xiaowei; Hyyppä, Juha; Honkavaara, Eija

2013-09-01

Recent research results have shown that the performance of digital surface model extraction using novel high-quality photogrammetric images and image matching is a highly competitive alternative to laser scanning. In this article, we proceed to compare the performance of these two methods in the estimation of plot-level forest variables. Dense point clouds extracted from aerial frame images were used to estimate the plot-level forest variables needed in a forest inventory covering 89 plots. We analyzed images with 60% and 80% forward overlaps and used test plots with off-nadir angles of between 0° and 20°. When compared to reference ground measurements, the airborne laser scanning (ALS) data proved to be the most accurate: it yielded root mean square error (RMSE) values of 6.55% for mean height, 11.42% for mean diameter, and 20.72% for volume. When we applied a forward overlap of 80%, the corresponding results from aerial images were 6.77% for mean height, 12.00% for mean diameter, and 22.62% for volume. A forward overlap of 60% resulted in slightly deteriorated RMSE values of 7.55% for mean height, 12.20% for mean diameter, and 22.77% for volume. According to our results, the use of higher forward overlap produced only slightly better results in the estimation of these forest variables. Additionally, we found that the estimation accuracy was not significantly impacted by the increase in the off-nadir angle. Our results confirmed that digital aerial photographs were about as accurate as ALS in forest resources estimation as long as a terrain model was available.

Robust reconstruction of a signal from its unthresholded recurrence plot subject to disturbances

NASA Astrophysics Data System (ADS)

Sipers, Aloys; Borm, Paul; Peeters, Ralf

2017-02-01

To make valid inferences from recurrence plots for time-delay embedded signals, two underlying key questions are: (1) to what extent does an unthresholded recurrence (URP) plot carry the same information as the signal that generated it, and (2) how does the information change when the URP gets distorted. We studied the first question in our earlier work [1], where it was shown that the URP admits the reconstruction of the underlying signal (up to its mean and a choice of sign) if and only if an associated graph is connected. Here we refine this result and we give an explicit condition in terms of the embedding parameters and the discrete Fourier spectrum of the URP. We also develop a method for the reconstruction of the underlying signal which overcomes several drawbacks that earlier approaches had. To address the second question we investigate robustness of the proposed reconstruction method under disturbances. We carry out two simulation experiments which are characterized by a broad band and a narrow band spectrum respectively. For each experiment we choose a noise level and two different pairs of embedding parameters. The conventional binary recurrence plot (RP) is obtained from the URP by thresholding and zero-one conversion, which can be viewed as severe distortion acting on the URP. Typically the reconstruction of the underlying signal from an RP is expected to be rather inaccurate. However, by introducing the concept of a multi-level recurrence plot (MRP) we propose to bridge the information gap between the URP and the RP, while still achieving a high data compression rate. We demonstrate the working of the proposed reconstruction procedure on MRPs, indicating that MRPs with just a few discretization levels can usually capture signal properties and morphologies more accurately than conventional RPs.

Influence of habitat structure and nature of substratum on limpet recruitment: Conservation implications for endangered species

NASA Astrophysics Data System (ADS)

Espinosa, Free; Rivera-Ingraham, Georgina; García-Gómez, Jose C.

2011-08-01

Habitat complexity has been recognised to exert a significant influence on the abundance and diversity of benthic invertebrates. This issue is especially important for the management of endangered species. The recruitment of limpet species was monitored monthly for one year on natural and artificial surfaces. Control plots showed the highest mean number of species and individuals settled per plot, followed by rough then smooth plots. Control plots presented the highest mean diversity values followed by rough and smooth plots. Recruits of the endangered limpet Patella ferruginea were mainly observed during the spring, from April to June. Recruitment seemed to be influenced by both the heterogeneity and nature of the substratum. P. ferruginea repopulation programmes involving the translocation of recruits on experimental plates should be conducted using similar materials to the natural substratum, such as granite or limestone, rather than plastic, avoiding surfaces with low levels of heterogeneity, and taking into account that translocation of adults is not feasible due to the high mortality observed.

WCPP-THE WOLF PLOTTING AND CONTOURING PACKAGE

NASA Technical Reports Server (NTRS)

Masaki, G. T.

1994-01-01

The WOLF Contouring and Plotting Package provides the user with a complete general purpose plotting and contouring capability. This package is a complete system for producing line printer, SC4020, Gerber, Calcomp, and SD4060 plots. The package has been designed to be highly flexible and easy to use. Any plot from a quick simple plot (which requires only one call to the package) to highly sophisticated plots (including motion picture plots) can be easily generated with only a basic knowledge of FORTRAN and the plot commands. Anyone designing a software system that requires plotted output will find that this package offers many advantages over the standard hardware support packages available. The WCPP package is divided into a plot segment and a contour segment. The plot segment can produce output for any combination of line printer, SC4020, Gerber, Calcomp, and SD4060 plots. The line printer plots allow the user to have plots available immediately after a job is run at a low cost. Although the resolution of line printer plots is low, the quick results allows the user to judge if a high resolution plot of a particular run is desirable. The SC4020 and SD4060 provide high speed high resolution cathode ray plots with film and hard copy output available. The Gerber and Calcomp plotters provide very high quality (of publishable quality) plots of good resolution. Being bed or drum type plotters, the Gerber and Calcomp plotters are usually slow and not suited for large volume plotting. All output for any or all of the plotters can be produced simultaneously. The types of plots supported are: linear, semi-log, log-log, polar, tabular data using the FORTRAN WRITE statement, 3-D perspective linear, and affine transformations. The labeling facility provides for horizontal labels, vertical labels, diagonal labels, vector characters of a requested size (special character fonts are easily implemented), and rotated letters. The gridding routines label the grid lines according to user specification. Special line features include multiple lines, dashed lines, and tic marks. The contour segment of this package is a collection of subroutines which can be used to produce contour plots and perform related functions. The package can contour any data which can be placed on a grid or data which is regularly spaced, including any general affine or polar grid data. The package includes routines which will grid random data. Contour levels can be specified at any values desired. Input data can be smoothed with undefined points being acceptable where data is unreliable or unknown. Plots which are extremely large or detailed can be automatically output in parts to improve resolution or overcome plotter size limitations. The contouring segment uses the plot segment for actual plotting, thus all the features described for the plotting segment are available to the user of the contouring segment. Included with this package are two data bases for producing world map plots in Mercator projection. One data base provides just continent outlines and another provides continent outlines and national borders in great detail. This package is written in FORTRAN IV and IBM OS ASSEMBLER and has been implemented on an IBM 360 with a central memory requirement of approximately 140K of 8 bit bytes. The ASSEMBLER routines are basic plotter interface routines. The WCPP package was developed in 1972.

Comparing the Survival Rate of Mangrove Clam, Polymesoda (Geloina) spp. (Solander 1876) Through Field Experiments in Mangrove Forests of Iriomote Island.

PubMed

Washitani, Yasuko; Hayakawa, Reiko; Li, Meihua; Shibata, Shozo

2017-06-01

Polymesoda spp., which represent bivalves in the mangrove ecosystem, inhabit the mangrove forests of the Indo-Pacific region. They tend not to be broadly distributed across zones within the mangrove forest, but are instead typically encountered in the mesozone. We conducted field rearing experiments on four plots which were set across a mangrove forest along the Urauchi River of Iriomote Island, from the seaward to landward sides, over a period of 10 months. We compared the survival rates of clams at these plots with different environment for four months. Salinity was also measured during the study period, and we established a correlation between survival rate and change in salinity of each plot. The survival rate of the plot in the mesozone was 90%, that of two plots which were positioned in the seaward zone of the mesozone was 40%, and that of the plot on the landward side was 0%. In plot 4, the ambient water of the bivalves was fresh water. The salinity of the seaward zone changed rapidly in one day, or the salinity of the ambient water surrounding the bivalves was high for a long period of time. In Plot 3, salinity change was gradual, and the average salinity was lower than in Plots 1 and 2. This study indicates that salinity level affects bivalve survival rate and that area similar the mesozone, where gradual salinity change and average salinity were neither too high nor too low, are suitable for these species.

Fatty acid transfer in the food web of a coastal Mediterranean lagoon: Evidence for high arachidonic acid retention in fish

NASA Astrophysics Data System (ADS)

Koussoroplis, Apostolos-Manuel; Bec, Alexandre; Perga, Marie-Elodie; Koutrakis, Emmanuil; Bourdier, Gilles; Desvilettes, Christian

2011-02-01

The transfer of fatty acids (FAs) in the food web of a Mediterranean lagoon was studied using FA compositional patterns across several trophic levels. The structure of the food web was inferred from C and N stable isotopes values and an isotope mixing model was used in order to estimate the relative contribution of the different potential food sources to the biomass of consumers. Bidimensional plots of FA composition of food web components against their δ 15N values indicated a general trend of increasing proportions of highly unsaturated fatty acids (HUFAs) with increasing trophic levels while the proportions of saturated fatty acids (SAFAs) and 18-carbon polyunsaturated fatty acids (PUFAs) decreased. Using the relative contributions of food sources to consumers and their FA compositions, a model was built in order to estimate the PUFA composition of consumer mixed diets which was compared to consumer PUFA profiles. The latter allowed the identification of the PUFAs which were mostly enriched/retained in consumer lipids. There was a surprisingly high retention of arachidonic acid (ARA), a trend which challenges the idea of low ARA needs in marine fish and suggests the important physiological role of this essential FA for fish in estuarine environments.

Emission characteristics of 6.78-MHz radio-frequency glow discharge plasma in a pulsed mode

NASA Astrophysics Data System (ADS)

Zhang, Xinyue; Wagatsuma, Kazuaki

2017-07-01

This paper investigated Boltzmann plots for both atomic and ionic emission lines of iron in an argon glow discharge plasma driven by 6.78-MHz radio-frequency (RF) voltage in a pulsed operation, in order to discuss how the excitation/ionization process was affected by the pulsation. For this purpose, a pulse frequency as well as a duty ratio of the pulsed RF voltage was selected as the experimenter parameters. A Grimm-style radiation source was employed at a forward RF power of 70 W and at an argon pressures of 670 Pa. The Boltzmann plot for low-lying excited levels of iron atom was on a linear relationship, which was probably attributed to thermal collisions with ultimate electrons in the negative glow region; in this case, the excitation temperature was obtained in a narrow range of 3300-3400 K, which was hardly affected by the duty ratio as well as the pulse frequency of the pulsed RF glow discharge plasma. This observation suggested that the RF plasma could be supported by a self-stabilized negative glow region, where the kinetic energy distribution of the electrons would be changed to a lesser extent. Additional non-thermal excitation processes, such as a Penning-type collision and a charge-transfer collision, led to deviations (overpopulation) of particular energy levels of iron atom or iron ion from the normal Boltzmann distribution. However, their contributions to the overall excitation/ionization were not altered so greatly, when the pulse frequency or the duty ratio was varied in the pulsed RF glow discharge plasma.

Relation between the Dynamics of Glassy Clusters and Characteristic Features of their Energy Landscape

NASA Astrophysics Data System (ADS)

De, Sandip; Schaefer, Bastian; Sadeghi, Ali; Sicher, Michael; Kanhere, D. G.; Goedecker, Stefan

2014-02-01

Based on a recently introduced metric for measuring distances between configurations, we introduce distance-energy (DE) plots to characterize the potential energy surface of clusters. Producing such plots is computationally feasible on the density functional level since it requires only a few hundred stable low energy configurations including the global minimum. By using standard criteria based on disconnectivity graphs and the dynamics of Lennard-Jones clusters, we show that the DE plots convey the necessary information about the character of the potential energy surface and allow us to distinguish between glassy and nonglassy systems. We then apply this analysis to real clusters at the density functional theory level and show that both glassy and nonglassy clusters can be found in simulations. It turns out that among our investigated clusters only those can be synthesized experimentally which exhibit a nonglassy landscape.

Effects of processed oil shale on the element content of Atriplex cancescens

DOE Office of Scientific and Technical Information (OSTI.GOV)

Anderson, B.M.

1982-01-01

Samples of four-wing saltbush were collected from the Colorado State University Intensive Oil Shale Revegetation Study Site test plots in the Piceance basin, Colorado. The test plots were constructed to evaluate the effects of processed oil shale geochemistry on plant growth using various thicknesses of soil cover over the processed shale and/or over a gravel barrier between the shale and soil. Generally, the thicker the soil cover, the less the influence of the shale geochemistry on the element concentrations in the plants. Concentrations of 20 elements were larger in the ash of four-wing saltbush growing on the plot with themore » gravel barrier (between the soil and processed shale) when compared to the sample from the control plot. A greater water content in the soil in this plot has been reported, and the interaction between the increased, percolating water and shale may have increased the availability of these elements for plant uptake. Concentrations of boron, copper, fluorine, lithium, molybdenum, selenium, silicon, and zinc were larger in the samples grown over processed shale, compared to those from the control plot, and concentrations for barium, calcium, lanthanum, niobium, phosphorus, and strontium were smaller. Concentrations for arsenic, boron, fluorine, molybdenum, and selenium - considered to be potential toxic contaminants - were similar to results reported in the literature for vegetation from the test plots. The copper-to-molybdenum ratios in three of the four samples of four-wing saltbush growing over the processed shale were below the ratio of 2:1, which is judged detrimental to ruminants, particularly cattle. Boron concentrations averaged 140 ppM, well above the phytotoxicity level for most plant species. Arsenic, fluorine, and selenium concentrations were below toxic levels, and thus should not present any problem for revegetation or forage use at this time.« less

Repeated count surveys help standardize multi-agency estimates of American Oystercatcher (Haematopus palliatus) abundance

USGS Publications Warehouse

Hostetter, Nathan J.; Gardner, Beth; Schweitzer, Sara H.; Boettcher, Ruth; Wilke, Alexandra L.; Addison, Lindsay; Swilling, William R.; Pollock, Kenneth H.; Simons, Theodore R.

2015-01-01

The extensive breeding range of many shorebird species can make integration of survey data problematic at regional spatial scales. We evaluated the effectiveness of standardized repeated count surveys coordinated across 8 agencies to estimate the abundance of American Oystercatcher (Haematopus palliatus) breeding pairs in the southeastern United States. Breeding season surveys were conducted across coastal North Carolina (90 plots) and the Eastern Shore of Virginia (3 plots). Plots were visited on 1–5 occasions during April–June 2013. N-mixture models were used to estimate abundance and detection probability in relation to survey date, tide stage, plot size, and plot location (coastal bay vs. barrier island). The estimated abundance of oystercatchers in the surveyed area was 1,048 individuals (95% credible interval: 851–1,408) and 470 pairs (384–637), substantially higher than estimates that did not account for detection probability (maximum counts of 674 individuals and 316 pairs). Detection probability was influenced by a quadratic function of survey date, and increased from mid-April (~0.60) to mid-May (~0.80), then remained relatively constant through June. Detection probability was also higher during high tide than during low, rising, or falling tides. Abundance estimates from N-mixture models were validated at 13 plots by exhaustive productivity studies (2–5 surveys wk−1). Intensive productivity studies identified 78 breeding pairs across 13 productivity plots while the N-mixture model abundance estimate was 74 pairs (62–119) using only 1–5 replicated surveys season−1. Our results indicate that standardized replicated count surveys coordinated across multiple agencies and conducted during a relatively short time window (closure assumption) provide tremendous potential to meet both agency-level (e.g., state) and regional-level (e.g., flyway) objectives in large-scale shorebird monitoring programs.

Susceptibility to Phytophthora ramorum in a key infectious host: landscape variation in host genotype, host phenotype, and environmental factors.

PubMed

Anacker, Brian L; Rank, Nathan E; Hüberli, Daniel; Garbelotto, Matteo; Gordon, Sarah; Harnik, Tami; Whitkus, Richard; Meentemeyer, Ross

2008-01-01

Sudden oak death is an emerging forest disease caused by the invasive pathogen Phytophthora ramorum. Genetic and environmental factors affecting susceptibility to P. ramorum in the key inoculum-producing host tree Umbellularia californica (bay laurel) were examined across a heterogeneous landscape in California, USA. Laboratory susceptibility trials were conducted on detached leaves and assessed field disease levels for 97 host trees from 12 225-m(2) plots. Genotype and phenotype characteristics were assessed for each tree. Effects of plot-level environmental conditions (understory microclimate, amount of solar radiation and topographic moisture potential) on disease expression were also evaluated. Susceptibility varied significantly among U. californica trees, with a fivefold difference in leaf lesion size. Lesion size was positively related to leaf area, but not to other phenotypic traits or to field disease level. Genetic diversity was structured at three spatial scales, but primarily among individuals within plots. Lesion size was significantly related to amplified fragment length polymorphism (AFLP) markers, but local environment explained most variation in field disease level. Thus, substantial genetic variation in susceptibility to P. ramorum occurs in its principal foliar host U. californica, but local environment mediates expression of susceptibility in nature.

Will fluctuations in salt marsh–mangrove dominance alter vulnerability of a subtropical wetland to sea‐level rise?

USGS Publications Warehouse

Mckee, Karen L.; Vervaeke, William

2018-01-01

To avoid submergence during sea-level rise, coastal wetlands build soil surfaces vertically through accumulation of inorganic sediment and organic matter. At climatic boundaries where mangroves are expanding and replacing salt marsh, wetland capacity to respond to sea-level rise may change. To compare how well mangroves and salt marshes accommodate sea-level rise, we conducted a manipulative field experiment in a subtropical plant community in the subsiding Mississippi River Delta. Experimental plots were established in spatially equivalent positions along creek banks in monospecific stands of Spartina alterniflora (smooth cordgrass) or Avicennia germinans (black mangrove) and in mixed stands containing both species. To examine the effect of disturbance on elevation dynamics, vegetation in half of the plots was subjected to freezing (mangrove) or wrack burial (salt marsh), which caused shoot mortality. Vertical soil development was monitored for 6 years with the surface elevation table-marker horizon system. Comparison of land movement with relative sea-level rise showed that this plant community was experiencing an elevation deficit (i.e., sea level was rising faster than the wetland was building vertically) and was relying on elevation capital (i.e., relative position in the tidal frame) to survive. Although Avicennia plots had more elevation capital, suggesting longer survival, than Spartina or mixed plots, vegetation type had no effect on rates of accretion, vertical movement in root and sub-root zones, or net elevation change. Thus, these salt marsh and mangrove assemblages were accreting sediment and building vertically at equivalent rates. Small-scale disturbance of the plant canopy also had no effect on elevation trajectories—contrary to work in peat-forming wetlands showing elevation responses to changes in plant productivity. The findings indicate that in this deltaic setting with strong physical influences controlling elevation (sediment accretion, subsidence), mangrove replacement of salt marsh, with or without disturbance, will not necessarily alter vulnerability to sea-level rise.

Guidelines for sampling aboveground biomass and carbon in mature central hardwood forests

Treesearch

Martin A. Spetich; Stephen R. Shifley

2017-01-01

As impacts of climate change expand, determining accurate measures of forest biomass and associated carbon storage in forests is critical. We present sampling guidance for 12 combinations of percent error, plot size, and alpha levels by disturbance regime to help determine the optimal size of plots to estimate aboveground biomass and carbon in an old-growth Central...

Stand-yield prediction for managed Ocala sand pine

Treesearch

D.L. Rockwood; B. Yang; K.W. Outcalt

1997-01-01

Sand pine is a very important species in Florida, producing significant quantities of fiber. The purpose of this study was to develop the site index and stand-level growth and yield equations managers need to make informed decisions. Data were collected from 35 seeded plots of Ocala sand pine covering a range of site indexes, ages, and densities in 1982-83. These plots...

A comparison of FIA plot data derived from image pixels and image objects

Treesearch

Charles E. Werstak

2012-01-01

The use of Forest Inventory and Analysis (FIA) plot data for producing continuous and thematic maps of forest attributes (e.g., forest type, canopy cover, volume, and biomass) at the regional level from satellite imagery can be challenging due to differences in scale. Specifically, classification errors that may result from assumptions made between what the field data...

Harvesting intensity affects forest structure and composition in an upland Amazonian forest

Treesearch

John A. Parrotta; John K. Francis; Oliver H. Knowles; NO-VALUE

2002-01-01

Forest structure and floristic composition were studied in a series of 0.5 ha natural forest plots at four sites near Porto Trombetas in Pará State, Brazil, 11–12 years after being subjected to differing levels of above-ground biomass harvest and removal. In addition to undisturbed control plots, experimental treatments included: removal of...

Effects of Canada goose herbivory on the tidal freshwater wetlands in Anacostia Park, 2009-2011

USGS Publications Warehouse

Krafft, Cairn C.; Hatfield, Jeffrey S.; Hammerschlag, Richard S.

2013-01-01

Herbivory has played a major role in dictating vegetation abundance and species composition at Kingman Marsh in Anacostia Park, Washington, D.C., since restoration of this tidal freshwater wetland was initiated in 2000. The diverse and robust vegetative cover that developed in the first year post-reconstruction experienced significant decimation in the second year, after the protective fencing was removed, and remained suppressed throughout the five-year study period. In June 2009 a herbivory study was initiated to document the impacts of herbivory by resident and nonmigratory Canada geese (Branta canadensis) to vegetation at Kingman Marsh. Sixteen modules consisting of paired fenced plots and unfenced control plots were constructed. Eight of the modules were installed in vegetated portions of the restoration site that had been protected over time by pre-existing fencing, while the remaining eight modules were placed in portions of the site that had not been protected over time and were basically unvegetated at the start of the experiment. Exclosure fencing was sufficiently elevated from the substrate level to allow access to other herbivores such as fish and turtles, while hopefully excluding mature Canada geese. The study was designed with an initial exclosure elevation of 20 cm. This elevation was chosen based on the literature, as adequate to exclude mature Canada geese, while maximizing access to other herbivores such as fish and turtles. Repeated measures analysis of variance (ANOVA) was used to analyze the differences between paired fenced and unfenced control plots for a number of variables including total vegetative cover. Differences in total vegetative cover were not statistically significant for the baseline data collected in June 2009. By contrast, two months after the old protective fencing was removed from the initially-vegetated areas to allow Canada geese access to the unfenced control plots, total vegetative cover had declined dramatically in the initially-vegetated unfenced control plots, and differences between paired fenced and unfenced control plots were statistically significant. These differences have remained steady and significant throughout the remainder of these first three years of the study. Total vegetative cover has followed a somewhat different path in the initially-unvegetated modules, where cover in the fenced plots did not significantly exceed cover in the unfenced control plots until the August 2010 sampling event. In spite of the slow start in the initially-unvegetated modules, differences between paired fenced plots and unfenced control plots have remained significant and even increased significantly over time. This indicates that total vegetative cover in the initially-unvegetated fenced plots and unfenced control plots is continuing to diverge over time as vegetation increases in the protected plots compared to the basically unvegetated unfenced control plots. Total vegetative cover has been composed almost entirely of native species during the first three years of the study, with cover by exotics averaging less than 1% during each sampling event. Species richness did not differ significantly between fenced plots and unfenced control plots during 2009, the first year of the study. Since August 2010, species richness has remained significantly greater in the fenced plots than in the unfenced control plots. These differences have remained relatively steady over time for both the initially-vegetated and initially unvegetated modules. During the study it became apparent that our elevated fence plots were more accessible to mature geese than we had expected. Even after lowering the exclosure fencing to 15 cm in 2010 and 10 cm in 2011, we documented geese inside exclosures in both years. Nonetheless the data indicate that even at 10 cm, we have limited the numbers of mature geese entering the fenced plots, rather than totally preventing their access through low spots in the uneven substrate surface. At an exclosure elevation of 10 cm and with a soft, mucky substrate, we are assuming that non-goose herbivores such as fish and turtles still have free access to the fenced plots. Annual wildrice (Zizania aquatica), known from previous studies to be especially palatable to Canada geese, has seen the greatest impact from partial access to the fenced plots by mature geese, moving from an overwhelming dominant in the initially-vegetated plots to a minor presence there by August 2011. Interestingly, pickerelweed (Pontederia cordata), also known to be highly palatable to Canada geese, has so far shown only minor herbivory in the fenced plots. By August 2011, pickerelweed had actually increased to significantly greater cover levels in the fenced plots compared to the unfenced control plots. In conclusion, the first three years of data document that vegetation exposed to full herbivory by resident and nonmigratory Canada geese for three years in the unfenced control plots showed significantly lower total vegetative cover and species richness compared to the vegetation in the fenced plots, which experienced reduced herbivory by resident and nonmigratory Canada geese. These effects were documented for modules located in both initially-vegetated and initially-unvegetated habitats.

Contrasting outcomes of species- and community-level analyses of the temporal consistency of functional composition.

PubMed

Katabuchi, Masatoshi; Wright, S Joseph; Swenson, Nathan G; Feeley, Kenneth J; Condit, Richard; Hubbell, Stephen P; Davies, Stuart J

2017-09-01

Multiple anthropogenic drivers affect every natural community, and there is broad interest in using functional traits to understand and predict the consequences for future biodiversity. There is, however, no consensus regarding the choice of analytical methods. We contrast species- and community-level analyses of change in the functional composition for four traits related to drought tolerance using three decades of repeat censuses of trees in the 50-ha Forest Dynamics Plot on Barro Colorado Island, Panama. Community trait distributions shifted significantly through time, which may indicate a shift toward more drought tolerant species. However, at the species level, changes in abundance were unrelated to trait values. To reconcile these seemingly contrasting results, we evaluated species-specific contributions to the directional shifts observed at the community level. Abundance changes of just one to six of 312 species were responsible for the community-level shifts observed for each trait. Our results demonstrate that directional changes in community-level functional composition can result from idiosyncratic change in a few species rather than widespread community-wide changes associated with functional traits. Future analyses of directional change in natural communities should combine community-, species-, and possibly individual-level analyses to uncover relationships with function that can improve understanding and enable prediction. © 2017 by the Ecological Society of America.

Variation in soil carbon dioxide efflux at two spatial scales in a topographically complex boreal forest

USGS Publications Warehouse

Kelsey, Katharine C.; Wickland, Kimberly P.; Striegl, Robert G.; Neff, Jason C.

2012-01-01

Carbon dynamics of high-latitude regions are an important and highly uncertain component of global carbon budgets, and efforts to constrain estimates of soil-atmosphere carbon exchange in these regions are contingent on accurate representations of spatial and temporal variability in carbon fluxes. This study explores spatial and temporal variability in soilatmosphere carbon dynamics at both fine and coarse spatial scales in a high-elevation, permafrost-dominated boreal black spruce forest. We evaluate the importance of landscape-level investigations of soil-atmosphere carbon dynamics by characterizing seasonal trends in soil-atmosphere carbon exchange, describing soil temperature-moisture-respiration relations, and quantifying temporal and spatial variability at two spatial scales: the plot scale (0–5 m) and the landscape scale (500–1000 m). Plot-scale spatial variability (average variation on a given measurement day) in soil CO2 efflux ranged from a coefficient of variation (CV) of 0.25 to 0.69, and plot-scale temporal variability (average variation of plots across measurement days) in efflux ranged from a CV of 0.19 to 0.36. Landscape-scale spatial and temporal variability in efflux was represented by a CV of 0.40 and 0.31, respectively, indicating that plot-scale spatial variability in soil respiration is as great as landscape-scale spatial variability at this site. While soil respiration was related to soil temperature at both the plot- and landscape scale, landscape-level descriptions of soil moisture were necessary to define soil respiration-moisture relations. Soil moisture variability was also integral to explaining temporal variability in soil respiration. Our results have important implications for research efforts in high-latitude regions where remote study sites make landscape-scale field campaigns challenging.

Modeling water flow and nitrate dynamics in a plastic mulch vegetable cultivation system using HYDRUS-2D

NASA Astrophysics Data System (ADS)

Filipović, Vilim; Romić, Davor; Romić, Marija; Matijević, Lana; Mallmann, Fábio J. K.; Robinson, David A.

2016-04-01

Growing vegetables commercially requires intensive management and involves high irrigation demands and input of agrochemicals. Plastic mulch application in combination with drip irrigation is a common agricultural management technique practiced due to variety of benefits to the crop, mostly vegetable biomass production. However, the use of these techniques can result in various impacts on water and nutrient distribution in underlying soil and consequently affect nutrient leaching towards groundwater resources. The aim of this work is to estimate the effect of plastic mulch cover in combination with drip irrigation on water and nitrate dynamics in soil using HYDRUS-2D model. The field site was located in Croatian costal karst area on a Gleysol (WRB). The experiment was designed according to the split-plot design in three repetitions and was divided into plots with plastic mulch cover (MULCH) and control plots with bare soil (CONT). Each of these plots received applications of three levels of nitrogen fertilizer: 70, 140, and 210 kg per ha. All plots were equipped with drip irrigation and cropped with bell pepper (Capsicum annuum L. cv. Bianca F1). Lysimeters were installed at 90 cm depth in all plots and were used for monitoring the water and nitrate outflow. HYDRUS-2D was used for modeling the water and nitrogen outflow in the MULCH and CONT plots, implementing the proper boundary conditions. HYDRUS-2D simulated results showed good fitting to the field site observed data in both cumulative water and nitrate outflow, with high level of agreement. Water flow simulations produced model efficiency of 0.84 for CONT and 0.56 for MULCH plots, while nitrate simulations showed model efficiency ranging from 0.67 to 0.83 and from 0.70 to 0.93, respectively. Additional simulations were performed with the absence of the lysimeter, revealing faster transport of nitrates below drip line in the CONT plots, mostly because of the increased surface area subjected to precipitation/irrigation due the absence of soil cover. Contrary, in the MULCH plots most of the nitrate applied was still left in the upper soil layer at the end of simulations. Numerical modeling revealed a large influence of plastic mulch cover on water and nutrient outflow and distribution in soil. Results suggest that under this management practice the nitrogen amounts applied via fertigation can be lowered and optimized (higher application frequencies) to reduce possible negative influence of the nitrogen based fertilizer such as leaching of nitrates to groundwater. Keywords: Plastic mulch cover; Vegetable cultivation; Water flow; Nitrate dynamics; HYDRUS-2D

One hundred and six years of population and community dynamics of Sonoran Desert Laboratory perennials

USGS Publications Warehouse

Rodriguez-Buritica, Susana; Raichle, Helen; Webb, Robert H.; Turner, Raymond M.; Venable, Larry

2013-01-01

This data set constitutes all information associated with the Spalding-Shreve permanent vegetation plots from 1906 through 2012, which is the longest-running plant monitoring program in the world. The program consists of detailed maps of all Sonoran Desert perennial plants in 30 permanent plots located on Tumamoc Hill, near Tucson, Arizona, USA. Most of these plots are 10 m × 10 m quadrats that were established by Volney Spalding and Forrest Shreve between 1906 and 1928. Analyses derived from these data have been pivotal in testing early theories on plant community succession, plant life history traits, plant longevity, and population dynamics. One of the major contributions of this data set is the species-specific demographic traits that derived from estimating individual plant trajectories for more than 106 years. Further use of these data might shed light on spatially explicit population and community dynamics, as well as long-term changes attributable to global change. Data presented here consist of digital versions of original maps created between 1906 and 1984 and digital data from recent censuses between 1993 and 2012. Attributes associated with these maps include location and coverage of all shrubs, and in some cases, plant height. In addition, we present plot-specific summaries of plant cover and density for each census year and all other information collected, including seedling counts, grass coverage, and annual species enumerations. We reference the repeat photography of these plots, which began in 1906; these images are stored at the Desert Laboratory Collection of Repeat Photography in Tucson. Initial data collection consisted of grid-mapping the plots manually on graph paper; starting in 1993, Total Stations (which allow a direct digitalization, and more accurate mapping) were used to survey root crowns and canopies.

Raindrop Impact, Disaggregation & CO2 emissions

NASA Astrophysics Data System (ADS)

Gao, Xin; Wang, Rui; Hu, Yaxian; Guo, Shengli

2017-04-01

On the Chinese Loess Plateau, heave storms often occur from July to September, which happens to be fallow season. Without protections from crop coverage, soil surface is completely exposed to rainfalls, receives much more enhanced raindrop impact, thus potentially experience advanced disaggregation. After breaking into smaller fragments, and exposing those previously encapsulated soil organic carbon (SOC), soil surface is very likely to release additional CO2 emissions. However, the possible addition of CO2 emissions from fallow season on the Chinese Loess Plateau, and its potential contribution to local carbon balances, have not yet been systematically investigated. In order to compare the effects of raindrop impacts to CO2 emissions on bare soil during fallow season, two erosion plots (100 cm * 40 cm *35 cm) were set up. Both plots were filled with the loess soil. One plot was covered with two meshes (1 mm * 1mm)overlapping each other, to simulate crop coverage; the other plot was directly exposed to raindrops. Both plots were placed underneath simulated rainfalls (intensity of 90 mm h-1), for 5 min and 10 min. After 24 hours post rainfalls, soil moisture and CO2 emissions from both plots were measured every day for one week. Soil particle size distributions from surface soil were also determined to compare the changes of soil composition. Our results show that raindrop impacted soil in general released more CO2 emissions than the covered soil, and this pattern was more pronounced after experiencing longer period of rainfall events (20.6% more after 5 min; 48.3% more after 10 min). This agreed well with the increase of soil particles < 0.01 mm observed on the raindrop impacted soil surface.

Performance of deep-rooted phreatophytic trees at a site containing total petroleum hydrocarbons.

PubMed

Ferro, Ari M; Adham, Tareq; Berra, Brett; Tsao, David

2013-01-01

Poplar and willow tree stands were installed in 2003 at a site in Raleigh, North Carolina containing total petroleum hydrocarbon - contaminated groundwater. The objective was groundwater uptake and plume control. The water table was 5 to 6 m below ground surface (bgs) and therefore methods were used to encourage deep root development. Growth rates, rooting depth and sap flow were measured for trees in Plot A located in the center of the plume and in Plot B peripheral to the plume. The trees were initially sub-irrigated with vertically installed drip-lines and by 2005 had roots 4 to 5 m bgs. Water balance calculations suggested groundwater uptake. In 2007, the average sap flow was higher for Plot B (approximately 59 L per day per tree) than for Plot A (approximately 23 L per day per tree), probably as a result of TPH-induced stress in Plot A. Nevertheless, the estimated rate of groundwater uptake for Plot A was sufficient, relative to the calculated rate of groundwater flux beneath the stand, that a high level of plume control was achieved based on MODFLOW modeling results. Down-gradient groundwater monitoring wells installed in late 2011 should provide quantitative data for plume control.

Climate change-associated trends in net biomass change are age dependent in western boreal forests of Canada.

PubMed

Chen, Han Y H; Luo, Yong; Reich, Peter B; Searle, Eric B; Biswas, Shekhar R

2016-09-01

The impacts of climate change on forest net biomass change are poorly understood but critical for predicting forest's contribution to the global carbon cycle. Recent studies show climate change-associated net biomass declines in mature forest plots. The representativeness of these plots for regional forests, however, remains uncertain because we lack an assessment of whether climate change impacts differ with forest age. Using data from plots of varying ages from 17 to 210 years, monitored from 1958 to 2011 in western Canada, we found that climate change has little effect on net biomass change in forests ≤ 40 years of age due to increased growth offsetting increased mortality, but has led to large decreases in older forests due to increased mortality accompanying little growth gain. Our analysis highlights the need to incorporate forest age profiles in examining past and projecting future forest responses to climate change. © 2016 John Wiley & Sons Ltd/CNRS.

Addition of organic amendments contributes to C sequestration in trace element contaminated soils.

NASA Astrophysics Data System (ADS)

del Mar Montiel Rozas, María; Panettier, Marco; Madejón Rodríguez, Paula; Madejón Rodríguez, Engracia

2015-04-01

Nowadays, the study of global C cycle and the different natural sinks of C have become especially important in a climate change context. Fluxes of C have been modified by anthropogenic activities and, presently, the global objective is the decrease of net CO2 emission. For this purpose, many studies are being conducted at local level for evaluate different C sequestration strategies. These techniques must be, in addition to safe in the long term, environmentally friendly. Restoration of contaminated and degraded areas is considered as a strategy for SOC sequestration. Our study has been carried out in the Guadiamar Green Corridor (Seville, Spain) affected by the Aznalcóllar mining accident. This accident occurred 16 years ago, due to the failure of the tailing dam which contained 4-5 million m3 of toxic tailings (slurry and acid water).The affected soils had a layer of toxic sludge containing heavy metals as As, Cd, Cu, Pb and Zn. Restoration techniques began to be applied just after the accident, including the removal of the toxic sludge and a variable layer of topsoil (10-30 cm) from the surface. In a second phase, in a specific area (experimental area) of the Green Corridor the addition of organic amendments (Biosolid compost (BC) and Leonardite (LE), a low grade coal rich in humic acids) was carried out to increase pH, organic matter and fertility in a soil which lost its richest layer during the clean-up operation. In our experimental area, half of the plots (A) received amendments for four years (2002, 2003, 2006 and 2007) whereas the other half (B) received amendments only for two years (2002-2003). To compare, plots without amendments were also established. Net balance of C was carried out using values of Water Soluble Carbon (WSC) and Total Organic Carbon (TOC) for three years (2012, 2013 and 2015). To eliminate artificial changes carried out in the plots, amendment addition and withdrawal of biomass were taken into account to calculate balance of kg TOC ha ¯¹. Thus, results revealed the effect of amendments. Values of net balance show an increase in C sequestered in amended plots. The retention of carbon in soluble and total forms was reflected in the increase in time. According to the results, application of leonardite (a more stabilized amendment) seems to entail a greater retention of carbon in soil than in the case of biosolid compost. Restoration strategies have multiple benefits for the ecosystem. In our case, the use of organic amendments decreased trace element toxicity, improved soil structure and microbial communities, and contribute to retain C in terrestrial ecosystems.

Radiocesium concentrations in soil and leaf after decontamination practices in a forest plantation highly polluted by the Fukushima accident.

PubMed

López-Vicente, Manuel; Onda, Yuichi; Takahashi, Junko; Kato, Hiroaki; Chayama, Shinya; Hisadome, Keigo

2018-08-01

Owing to the Fukushima Dai-ichi Nuclear Power Plant (FDNPP) accident a vast amount of radiocesium was released polluting the land. Afterwards, a variety of decontamination practices has been done, reducing the ambient dose rates. In this study we evaluated the effectiveness of eight forest decontamination practices by means of monitoring the radiocesium ( 137 Cs) concentration in soil and leaf samples, and the daily discharge rates in ten plots during 27 months (May 2013-July 2015). A forest plantation located 16 km southwest to the FDNPP and within the exclusion area was selected. Radiocesium concentrations were analysed using a germanium gamma ray detector. The differences in radiocesium activities between the different plots were statistically significant (p < 0.05) and four homogeneous groups were distinguished. Tree thinning and litter removal greatly reduced the radioactivity and the two plots devoted to these practices presented the highest discharge rates of 137 Cs (Th + LR; 350-380 Bq/m 2 day), followed by the two Th plots (163-174 Bq/m 2 day). The clearcutting with LR and the LR plots (104 and 92 Bq/m 2 day) also had higher rates than those rates in the control plots (51 Bq/m 2 day). We only observed low rates in the two plots with matting (19-25 Bq/m 2 day). The temporal variability was explained by (i) the different rainfall depths registered during the measurement intervals (accumulated precipitation from 14 to 361 mm); and (ii) the fluctuations of the total surface coverage. The decrease trend in radiocesium concentration was high in 2013, moderate in 2014 and low in 2015 owing to the vegetation recovery after the countermeasures, thus reducing the possibility of the second pollution of the neighbouring areas. The average proportions of contribution of 137 Cs discharge by soil and leaf fraction were 96.6% and 3.4%. Copyright © 2018 Elsevier Ltd. All rights reserved.

Drought effects on soil CO

NASA Astrophysics Data System (ADS)

van Straaten, O.; Veldkamp, E.; Köhler, M.; Anas, I.

2009-12-01

Climate change induced droughts pose a serious threat to ecosystems across the tropics and sub-tropics, particularly to those areas not adapted to natural dry periods. In order to study the vulnerability of cacao (Theobroma cacao) - Gliricidia sepium agroforestry plantations to droughts a large scale throughfall displacement roof was built in Central Sulawesi, Indonesia. In this 19-month replicated experiment, we measured soil surface CO2 efflux (soil respiration) in three simulated drought plots compared with three adjacent control plots. Soil respiration rates peaked at intermediate soil moisture and decreased under increasingly dry conditions (drought induced), but also decreased when soils became water saturated, as evidenced in control plots. The simulated drought plots exhibited a slight decrease in soil respiration compared to the control plots (average 13% decrease). The strength of the drought effect was spatially variable - while some measurement chamber sites reacted strongly ("responsive") to the decrease in soil water content (up to R2=0.70) (n=11), others did not react at all ("non-responsive") (n=7). The degree of soil CO2 respiration drought response was highest around cacao tree stems and decreased with distance from the stem (R2=0.22). A significant correlation was measured between "responsive" soil respiration chamber sites and sap flux density ratios of cacao (R=0.61) and Gliricidia (R=0.65). Leaf litter CO2 respiration decreased as conditions became drier. During dry periods the litter layer contributed approximately 3-4% of the total CO2 efflux and up to 40% during wet periods. A CO2 flush was recorded during the rewetting phase that lasted for approximately two weeks, during which time accumulated labile carbon stocks mineralized. The net effect on soil CO2 emissions over the duration of the experiment was neutral, control plots respired 11.1±0.5 Mg C ha-1 yr-1, while roof plots respired 10.5±0.5 Mg C ha-1 yr-1.

Avionics electromagnetic interference immunity and environment

NASA Technical Reports Server (NTRS)

Clarke, C. A.

1986-01-01

Aircraft electromagnetic spectrum and radio frequency (RF) field strengths are charted, profiling the higher levels of electromagnetic voltages encountered by the commercial aircraft wiring. Selected military, urban, and rural electromagnetic field levels are plotted and provide a comparison of radiation amplitudes. Low frequency magnetic fields and electric fields from 400 H(Z) power systems are charted versus frequency and wire separation to indicate induced voltages on adjacent or neighboring circuits. Induced EMI levels and attenuation characteristics of electric, magnetic, RF fields, and transients are plotted and graphed for common types of wire circuits. The significance of wire circuit returns and shielding is emphasized to highlight the techniques that help block the paths of electromagnetic interference and maintain avionic interface signal quality.

Pyrolysis-mass spectrometry/pattern recognition on a well-characterized suite of humic samples

USGS Publications Warehouse

MacCarthy, P.; DeLuca, S.J.; Voorhees, K.J.; Malcolm, R.L.; Thurman, E.M.

1985-01-01

A suite of well-characterized humic and fulvic acids of freshwater, soil and plant origin was subjected to pyrolysis-mass spectrometry and the resulting data were analyzed by pattern recognition and factor analysis. A factor analysis plot of the data shows that the humic acids and fulvic acids can be segregated into two distinct classes. Carbohydrate and phenolic components are more pronounced in the pyrolysis products of the fulvic acids, and saturated and unsaturated hydrocarbons contribute more to the humic acid pyrolysis products. A second factor analysis plot shows a separation which appears to be based primarily on whether the samples are of aquatic or soil origin. ?? 1985.

Structural, dielectric and impedance studies of polycrystalline La0.6Dy0.2Ca0.2MnO3

NASA Astrophysics Data System (ADS)

Nandan, K. R.; Kumar, A. Ruban

2017-05-01

Polycrystalline materials of Dy doped La1-xCaxMnO3 were prepared by Sol-Gel technique using citric acid as a chelating agent at 900°C. The compound was analyzed by powder X-ray diffraction technique and confirmed to be single phased orthorhombic perovskite structure with space group Pnma. From the dielectric and impedance studies confirmed the existence of dielectric relaxation and presence of space charge were observed from the dielectric constant and impedance plots respectively and confirms the existence of relaxation due to oxygen vacancy. Cole-cole plot confirms the presence of dielectric relaxation and grain contribution in the synthesized sample.

Characters as Guides to Meaning

ERIC Educational Resources Information Center

Roser, Nancy; Martinez, Miriam; Fuhrken, Charles; McDonnold, Kathleen

2007-01-01

Characters in children's books can help to guide readers through stories, contributing to deepened understandings of plot and themes. The authors discuss why characters become vivid and lasting in readers' minds, the ways in which students are often asked to think about characters in classroom literature study, and how students' understanding of…

Development of the Veritas plot and its application in cardiac surgery: an evidence-synthesis graphic tool for the clinician to assess multiple meta-analyses reporting on a common outcome.

PubMed

Panesar, Sukhmeet S; Rao, Christopher; Vecht, Joshua A; Mirza, Saqeb B; Netuveli, Gopalakrishnan; Morris, Richard; Rosenthal, Joe; Darzi, Ara; Athanasiou, Thanos

2009-10-01

Meta-analyses may be prone to generating misleading results because of a paucity of experimental studies (especially in surgery); publication bias; and heterogeneity in study design, intervention and the patient population of included studies. When investigating a specific clinical or scientific question on which several relevant meta-analyses may have been published, value judgments must be applied to determine which analysis represents the most robust evidence. These value judgments should be specifically acknowledged. We designed the Veritas plot to explicitly explore important elements of quality and to facilitate decision-making by highlighting specific areas in which meta-analyses are found to be deficient. Furthermore, as a graphic tool, it may be more intuitive than when similar data are presented in a tabular or text format. The Veritas plot is an adaption of the radar plot, a graphic tool for the description of multiattribute data. Key elements of meta-analytical quality such as heterogeneity, publication bias and study design are assessed. Existing qualitative methods such as the Assessment of Multiple Systematic Reviews (AMSTAR) tool have been incorporated in addition to important considerations when interpreting surgical meta-analyses such as the year of publication and population characteristics. To demonstrate the potential of the Veritas plot to inform clinical practice, we apply the Veritas plot to the meta-analytical literature comparing the incidence of 30-day stroke in off-pump coronary artery bypass surgery and conventional coronary artery bypass surgery. We demonstrate that a visually-stimulating and practical evidence-synthesis tool can direct the clinician and scientist to a particular meta-analytical study to inform clinical practice. The Veritas plot is also cumulative and allowed us to assess the quality of evidence over time. We have presented a practical graphic application for scientists and clinicians to identify and interpret variability in meta-analyses. Although further validation of the Veritas plot is required, it may have the potential to contribute to the implementation of evidence-based practice.

Tracking contributions to human body burden of environmental chemicals by correlating environmental measurements with biomarkers.

PubMed

Shin, Hyeong-Moo; McKone, Thomas E; Sohn, Michael D; Bennett, Deborah H

2014-01-01

The work addresses current knowledge gaps regarding causes for correlations between environmental and biomarker measurements and explores the underappreciated role of variability in disaggregating exposure attributes that contribute to biomarker levels. Our simulation-based study considers variability in environmental and food measurements, the relative contribution of various exposure sources (indoors and food), and the biological half-life of a compound, on the resulting correlations between biomarker and environmental measurements. For two hypothetical compounds whose half-lives are on the order of days for one and years for the other, we generate synthetic daily environmental concentrations and food exposures with different day-to-day and population variability as well as different amounts of home- and food-based exposure. Assuming that the total intake results only from home-based exposure and food ingestion, we estimate time-dependent biomarker concentrations using a one-compartment pharmacokinetic model. Box plots of modeled R2 values indicate that although the R2 correlation between wipe and biological (e.g., serum) measurements is within the same range for the two compounds, the relative contribution of the home exposure to the total exposure could differ by up to 20%, thus providing the relative indication of their contribution to body burden. The novel method introduced in this paper provides insights for evaluating scenarios or experiments where sample, exposure, and compound variability must be weighed in order to interpret associations between exposure data.

Portfolio effects, climate change, and the persistence of small populations: analyses on the rare plant Saussurea weberi.

PubMed

Abbott, Ronald E; Doak, Daniel F; Peterson, Megan L

2017-04-01

The mechanisms that stabilize small populations in the face of environmental variation are crucial to their long-term persistence. Building from diversity-stability concepts in community ecology, within-population diversity is gaining attention as an important component of population stability. Genetic and microhabitat variation within populations can generate diverse responses to common environmental fluctuations, dampening temporal variability across the population as a whole through portfolio effects. Yet, the potential for portfolio effects to operate at small scales within populations or to change with systematic environmental shifts, such as climate change, remain largely unexplored. We tracked the abundance of a rare alpine perennial plant, Saussurea weberi, in 49 1-m 2 plots within a single population over 20 yr. We estimated among-plot correlations in log annual growth rate to test for population-level synchrony and quantify portfolio effects across the 20-yr study period and also in 5-yr subsets based on June temperature quartiles. Asynchrony among plots, due to different plot-level responses to June temperature, reduced overall fluctuations in abundance and the probability of decline in population models, even when accounting for the effects of density dependence on dynamics. However, plots became more synchronous and portfolio effects decreased during the warmest years of the study, suggesting that future climate warming may erode stabilizing mechanisms in populations of this rare plant. © 2017 by the Ecological Society of America.

Surveillance of Site A and Plot M, Report for 2009.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Golchert, N. W.

2010-04-21

The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2009 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are usedmore » to monitor the migration pathway of hydrogen-3 contaminated water from the burial ground (Plot M) to the hand-pumped picnic wells and monitor for the presence of radioactive materials in the environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.« less

Surveillance of Site A and Plot M report for 2010.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Golchert, N. W.

2011-05-31

The results of the environmental surveillance program conducted at Site A/Plot M in the Palos Forest Preserve area for Calendar Year 2010 are presented. Based on the results of the 1976-1978 radiological characterization of the site, a determination was made that a surveillance program be established. The characterization study determined that very low levels of hydrogen-3 (as tritiated water) had migrated from the burial ground and were present in two nearby hand-pumped picnic wells. The current surveillance program began in 1980 and consists of sample collection and analysis of surface and subsurface water. The results of the analyses are usedmore » to monitor the migration pathway of hydrogen-3 contaminated water from the burial ground (Plot M) to the hand-pumped picnic wells and monitor for the presence of radioactive materials in the environment of the area. Hydrogen-3 in the Red Gate Woods picnic wells was still detected this year, but the average and maximum concentrations were significantly less than found earlier. Hydrogen-3 continues to be detected in a number of wells, boreholes, dolomite holes, and a surface stream. Analyses since 1984 have indicated the presence of low levels of strontium-90 in water from a number of boreholes next to Plot M. The results of the surveillance program continue to indicate that the radioactivity remaining at Site A/Plot M does not endanger the health or safety of the public visiting the site, using the picnic area, or living in the vicinity.« less

GOplot: an R package for visually combining expression data with functional analysis.

PubMed

Walter, Wencke; Sánchez-Cabo, Fátima; Ricote, Mercedes

2015-09-01

Despite the plethora of methods available for the functional analysis of omics data, obtaining comprehensive-yet detailed understanding of the results remains challenging. This is mainly due to the lack of publicly available tools for the visualization of this type of information. Here we present an R package called GOplot, based on ggplot2, for enhanced graphical representation. Our package takes the output of any general enrichment analysis and generates plots at different levels of detail: from a general overview to identify the most enriched categories (bar plot, bubble plot) to a more detailed view displaying different types of information for molecules in a given set of categories (circle plot, chord plot, cluster plot). The package provides a deeper insight into omics data and allows scientists to generate insightful plots with only a few lines of code to easily communicate the findings. The R package GOplot is available via CRAN-The Comprehensive R Archive Network: http://cran.r-project.org/web/packages/GOplot. The shiny web application of the Venn diagram can be found at: https://wwalter.shinyapps.io/Venn/. A detailed manual of the package with sample figures can be found at https://wencke.github.io/ fscabo@cnic.es or mricote@cnic.es. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

CO2 and CH4 Fluxes across Polygon Geomorphic Types, Barrow, Alaska, 2006-2010

DOE Data Explorer

Tweedie,Craig; Lara, Mark

2014-09-17

Carbon flux data are reported as Net Ecosystem Exchange (NEE), Gross Ecosystem Exchange (GEE), Ecosystem Respiration (ER), and Methane (CH4) flux. Measurements were made at 82 plots across various polygon geomorphic classes at research sites on the Barrow Environmental Observatory (BEO), the Biocomplexity Experiment site on the BEO, and the International Biological Program (IBP) site a little west of the BEO. This product is a compilation of data from 27 plots as presented in Lara et al. (2012), data from six plots presented in Olivas et al. (2010); and from 49 plots described in (Lara et al. 2014). Measurements were made during the peak of the growing seasons during 2006 to 2010. At each of the measurement plots (except Olivas et al., 2010) four different thicknesses of shade cloth were used to generate CO2 light response curves. Light response curves were used to normalize photosynthetically active radiation that is diurnally variable to a peak growing season average ~400 umolm-2sec-1. At the Olivas et al. (2010) plots, diurnal patterns were characterized by repeated sampling. CO2 measurements were made using a closed-chamber photosynthesis system and CH4 measurements were made using a photo-acoustic multi-gas analyzer. In addition, plot-level measurements for thaw depth (TD), water table depth (WTD), leaf area index (LAI), and normalized difference vegetation index (NDVI) are summarized by geomorphic polygon type.

Low-level radioactive-waste burial at the Palos Forest Preserve, Illinois; geology and hydrology of the glacial drift, as related to the migration of tritium

USGS Publications Warehouse

Olimpio, Julio C.

1984-01-01

A low-level radioactive-waste burial site is located in Palos Forest Preserve, about 22 kilometers southwest of Chicago, Illinois. Between 1943 and 1949 the site, named Plot M, was filled with radioactive waste from the first Argonne National Laboratory and from the University of Chicago Metallurgical Laboratory. Since 1973, tritium concentration levels up to 14 nanocuries per liter have been measured in water samples collected from a well 360 meters from the burial site. The U.S. Geological Survey is studying the geologic, hydrologic, and geochemical properties of the glacial drift and underlying bedrock at the Plot M site to determine the factors that control the movement of radionuclides. Test wells were drilled into the drift to collect water and core samples for laboratory analysis, to gather geologic and hydrologic data, and to conduct geophysical surveys. Plot M is located in drift that ranges in thickness from 25 to 45 meters. The drift is a stratified sequence of clay- and silt-rich sediments that contain thin, interstratified sand layers. The silt content of the drift increases with depth. The permeability of the drift, as indicated by field and laboratory hydraulic conductivity tests, ranges from 1.0 x 10 -6 to 1.0 ? 10 -8 centimeters per second. A tritium plume, the contaminated zone in the drift in which tritium concentration levels exceed 10 nanocuries per liter of water, extends horizontally northward from Plot M at least 50 meters and vertically downward to bedrock. The center of the plume, where tritium concentration levels are as high as 50,000 nanocuries per liter, is approximately 15 meters beneath the burial site. The size, shape, and 'bull's-eye' concentration pattern indicate that the plume is a single slug and that the site no longer releases tritium into the drift. The leading edge, or front, of the plume (the 10 nanocuries per liter boundary) left the burial site in either the late 1940's or the early 1950's and intersected the underlying bedrock surface before 1973. The calculated movement rate of the front is 6.3 x 10 -6 centimeters per second. Several key factors that control both the concentration level and the extent of migration of tritium in the drift at Plot M are 1. The limited amount of tritiated waste buried at Plot M. 2. The long period of time that has elapsed since the waste was buried (30-35 years) relative to the radioactive half-life of tritium (12.3 years). 3. The great thickness and low permeability of the glacial drift at the site.

Cucumber plants (cucumis sativus l.) growth and crop yield of chicken manure fertilized with plant spacing

NASA Astrophysics Data System (ADS)

Pratiwi Aritonang, Sri; Panjaitan, Ernitha; Parsaulian Tondang, Fetrus

2018-03-01

The research was conducted in Tanjung Sari, Kecamatan Medan Selayang Kotamadya Medan ± 32 meters above sea level. It started since July 2016 to September 2016. It was designed with randomization block design with two factorial experiments which are chicken manure and plant spacing. First factor was 4 doses of chicken manure, symbolized by K; K0 = 1.5 kg/plot, K1 = 2 kg/plot, K2 = 2.5 kg/plot and K3 = 3 kg/plot. Second was 4 different plant spacing, symbolized by J; J0 = 30 cm x 60 cm, J1 =: 35 cm x 60 cm, J2 = 40 cm x 60 cm and J3 = 45 cm x 60 cm. The result shows that giving 3kg/plot of chicken manure increases plant height to 162.15 cm with 22.44 number of leaves. Fresh fruits per sample was weight 1121.88 g and per plot is 4.52 kg with 9.17 and 36.67 units of fruits per sample and plot respectively. With 45 cm x 60 cm (J3) for plant spacing gives a plant with the height of 160.51 cm and 22.85 number of leaves. Fresh fruits obtained is 1216.67 g and 9.33 units per sample while per plot gives 4.90 kg and 7.33 units of fresh fruits. This plant spacing leads to a better output for the yield compared to narrower spacing. There are no interaction between chicken manure dosage and plant spacing towards plant height, number of leaves, fresh fruits weight and units per sample and plot.

Grassland productivity in response to nutrient additions and herbivory is scale-dependent

PubMed Central

Baldwin, Douglas C.; Naithani, Kusum J.

2016-01-01

Vegetation response to nutrient addition can vary across space, yet studies that explicitly incorporate spatial pattern into experimental approaches are rare. To explore whether there are unique spatial scales (grains) at which grass response to nutrients and herbivory is best expressed, we imposed a large (∼3.75 ha) experiment in a South African coastal grassland ecosystem. In two of six 60 × 60 m grassland plots, we imposed a scaled sampling design in which fertilizer was added in replicated sub-plots (1 × 1 m, 2 × 2 m, and 4 × 4 m). The remaining plots either received no additions or were fertilized evenly across the entire area. Three of the six plots were fenced to exclude herbivory. We calculated empirical semivariograms for all plots one year following nutrient additions to determine whether the scale of grass response (biomass and nutrient concentrations) corresponded to the scale of the sub-plot additions and compared these results to reference plots (unfertilized or unscaled) and to plots with and without herbivory. We compared empirical semivariogram parameters to parameters from semivariograms derived from a set of simulated landscapes (neutral models). Empirical semivariograms showed spatial structure in plots that received multi-scaled nutrient additions, particularly at the 2 × 2 m grain. The level of biomass response was predicted by foliar P concentration and, to a lesser extent, N, with the treatment effect of herbivory having a minimal influence. Neutral models confirmed the length scale of the biomass response and indicated few differences due to herbivory. Overall, we conclude that interpretation of nutrient limitation in grasslands is dependent on the grain used to measure grass response and that herbivory had a secondary effect. PMID:27920956

Characteristics and sensitivity analysis of multiple-time-resolved source patterns of PM2.5 with real time data using Multilinear Engine 2

NASA Astrophysics Data System (ADS)

Peng, Xing; Shi, Guo-Liang; Gao, Jian; Liu, Jia-Yuan; HuangFu, Yan-Qi; Ma, Tong; Wang, Hai-Ting; Zhang, Yue-Chong; Wang, Han; Li, Hui; Ivey, Cesunica E.; Feng, Yin-Chang

2016-08-01

With real time resolved data of Particulate matter (PM) and chemical species, understanding the source patterns and chemical characteristics is critical to establish controlling of PM. In this work, PM2.5 and chemical species were measured by corresponding online instruments with 1-h time resolution in Beijing. Multilinear Engine 2 (ME2) model was applied to explore the sources, and four sources (vehicle emission, crustal dust, secondary formation and coal combustion) were identified. To investigate the sensitivity of time resolution on the source contributions and chemical characteristics, ME2 was conducted with four time resolution runs (1-h, 2-h, 4-h, and 8-h). Crustal dust and coal combustion display large variation in the four time resolutions runs, with their contributions ranging from 6.7 to 10.4 μg m-3 and from 6.4 to 12.2 μg m-3, respectively. The contributions of vehicle emission and secondary formation range from 7.5 to 10.5 and from 14.7 to 16.7 μg m-3, respectively. The sensitivity analyses were conducted by principal component analysis-plot (PCA-plot), coefficient of divergence (CD), average absolute error (AAE) and correlation coefficients. For the four time resolution runs, the source contributions and profiles of crustal dust and coal combustion were more unstable than other source categories, possibly due to the lack of key markers of crustal dust and coal combustion (e.g. Si, Al). On the other hand, vehicle emission and crustal dust were more sensitive to time series of source contributions at different time resolutions. Findings in this study can improve our knowledge of source contributions and chemical characteristics at different time solutions.

Effects of repeated precommercial thinnings in central hardwood sapling stands

Treesearch

Donald E. Hilt; Martin E. Dale

1982-01-01

Precommercial thinnings were repeated four times in a central hardwood sapling stand beginning at age 8 and ending at age 22. Treated plots were thinned on an area-wide basis to specified density levels of 30-, 50-, and 70-percent stocking. The species composition of all stems in the stand was altered somewhat by thinning, but similar trends occurred on control plots....

Wisconsin street tree assessment, 2002-2003

Treesearch

Anne Buckelew Cumming; Daniel B. Twardus; Robert Hoehn; David J. Nowak; Manfred Mielke; Richard Rideout; Helen Butalla; Patricia Lebow

2008-01-01

A pilot study to assess the structure, function, and health of Wisconsin’s street trees was initiated in 2002. Almost 900 plots were established in Wisconsin’s urban areas. Table 1 provides an overview of plot-level data, population estimates, and a calculated monetary value for Wisconsin’s street trees. Wisconsin has mid-sized street trees, dominated by Norway maple (...

Seasonal development of loblolly pine lateral roots in response to stand density and fertilization

Treesearch

M.A. Sword

1998-01-01

In 1989, two levels each of stand density and fertilization treatments were factorially established in a 9-year-old loblolly pine plantation on a P-deficient Gulf Coastal Plain site in Rapides Parish, Louisiana, USA. In 1995, a second thinning was conducted on the previously thinned plots and fertilizer was re-applied to the previously fertilized plots. The morphology...

Preliminary Evaluation of Methods for Classifying Forest Site Productivity Based on Species Composition in Western North Carolina

Treesearch

W. Henry McNab; F. Thomas Lloyd; David L. Loftis

2002-01-01

The species indicator approach to forest site classification was evaluated for 210 relatively undisturbed plots established by the USDA Forest Service Forest Inventory and Analysis uni (FIA) in western North Carolina. Plots were classified by low, medium, and high levels of productivity based on 10-year individual tree basal area increment data standardized for initial...

Red spruce ecosystem level changes following 14 years of chronic N fertilization

Treesearch

Steven G. McNulty; Johnny Boggs; John D. Aber; Lindsey Rustad; Allison Magill

2005-01-01

In the early 1980s, nitrogen (N) deposition was first postulated as a cause of N saturation and spruce mortality across the northeastern US. In 1988, a series of high elevation spruce-fir forest N addition plots were established on Mt. Ascutney (southeastern) Vermont to test this hypothesis. The paired plots each received, in addition to ambient N deposition, 15.7 kg...

Impacts of deer herbivory on vegetation in Rock Creek Park, 2001-2009

USGS Publications Warehouse

Kraft, Cairn C.; Hatfield, Jeff S.

2011-01-01

Starting in 2001, vegetation data have been collected annually in 16 study modules consisting of paired (1x4 m) fenced plots and unfenced control plots located in the upland forests of Rock Creek Park, Washington, D.C. Vegetation data collected from 2001-2009 have been analyzed to determine impacts of deer herbivory on vegetation in the park. Differences between fenced plots and unfenced control plots were analyzed for the following variables: cover provided by various groups of species (woody, herbaceous, native, non-native, trees, shrubs, and woody vines), as well as by individual dominant species, vegetation thickness (a measure of percent cover projected horizontally that provides information on the vertical distribution of vegetation), and species richness overall and for groups of species (woody, herbaceous, native, non-native, trees, shrubs, and woody vines). The analyses were performed using repeated measures analysis of variance (ANOVA) and associated tests. Vegetation in plots protected from deer herbivory for 9 years showed significantly greater vegetative cover compared to plots not protected from deer herbivory. This effect was most pronounced for woody and shrub cover. Cover by the dominant species was not significantly greater in the fenced plots compared to the unfenced control plots, indicating that the significant differences observed for groups were not driven by single species within those groups. With respect to vegetation thickness, results indicate that protection from deer herbivory produced significantly higher levels of vegetation in the fenced plots compared to the unfenced control plots for both the Low (0-30 cm) and Middle (30-110 cm) height classes. Protection from deer herbivory has led to higher overall species richness and higher species richness for woody species, natives, and shrubs compared to plots not receiving protection. There is also evidence that plots protected from deer herbivory and those not receiving this protection are diverging over time with respect to a number of variables such as cover by woody and shrub species, cover in the lowest height class, and species richness of woody and native species. Recommendations were made regarding future sampling.

The important role of scattered trees on the herbaceous diversity of a grazed Mediterranean dehesa

NASA Astrophysics Data System (ADS)

López-Sánchez, Aida; San Miguel, Alfonso; López-Carrasco, Celia; Huntsinger, Lynn; Roig, Sonia

2016-10-01

Scattered trees are considered keystone structures and play an important role in Mediterranean sylvopastoral systems. Such systems are associated with high biodiversity and provide important natural resources and ecosystem services. In this study, we measured the contribution of scattered trees and different grazing management (cattle, sheep and wildlife only) to the diversity of the grassland sward in a dehesa (open holm oak woodland) located in Central Spain. We analyzed alpha and beta diversity through measurement of species richness, Shannon-Wiener, and Whittaker indices, respectively; and the floristic composition of the herb layer using subplots within two adjacent plots (trees present vs. trees absent) under three different grazing management regimes, including wildlife only, during a year. We found a 20-30% increment in the alpha diversity of wooded plots, compared to those without trees, regardless of grazing management. All beta indices calculated showed more than 60% species turnover. Wooded plots were occupied by different herbaceous species in different heterogeneous microsites (under the canopy, in the ecotone or on open land) created by the trees. Livestock grazing modified species composition (e.g. more nitrophilous species) compared to wildlife only plots. In addition to all their other benefits, trees are important to maintaining grassland diversity in Mediterranean dehesas.

Suppression of prairie grasses due to excess magnesium in a portion of a restored prairie.

PubMed

Franson, Raymond; Krabbe, Stephen; Scholes, Chad

2017-01-02

In June 2002, the Department of Energy (DOE) began establishing the 60 ha Howell Prairie at the DOE Weldon Spring Site (WSS). In one area, the clay base is different from the other soil (subarea 2C). Vegetation sampling was conducted on four permanent plots across the prairie beginning in 2008, and shows that three of the four plots have strong establishment of native prairie species including prairie grasses. The fourth plot (subarea 2C), where the soil is different, shows significantly less native grass cover and stunted vegetation compared to the other three plots. One hundred twenty-five soil samples were taken in 6 different months and in 6 different years across the entire prairie restoration. Across the prairie, potassium (K) and phosphorus (P) were not limiting. The pH, organic matter content (OM), and cation exchange capacity (CEC) did not show trends related to the vegetation issues in subarea 2C. Ordination of the ratio of magnesium (Mg):K shows that Mg is very high in subarea 2C, which has been demonstrated to suppress the growth of prairie grasses. Subarea 2C contains interstratified kaolinite-smectite clay which contributes Mg to soil. It is hypothesized that an inexpensive, nondestructive treatment (addition of K) could be applied to remediate this area.

Changes in tree resistance, recovery and resilience across three successive extreme droughts in the northeast Iberian Peninsula.

PubMed

Serra-Maluquer, X; Mencuccini, M; Martínez-Vilalta, J

2018-05-01

Understanding which variables affect forest resilience to extreme drought is key to predict future dynamics under ongoing climate change. In this study, we analyzed how tree resistance, recovery and resilience to drought have changed along three consecutive droughts and how they were affected by species, tree size, plot basal area (as a proxy for competition) and climate. We focused on the three most abundant pine species in the northeast Iberian Peninsula: Pinus halepensis, P. nigra and P. sylvestris during the three most extreme droughts recorded in the period 1951-2010 (occurred in 1986, 1994, and 2005-2006). We cored trees from permanent sample plots and used dendrochronological techniques to estimate resistance (ability to maintain growth level during drought), recovery (growth increase after drought) and resilience (capacity to recover pre-drought growth levels) in terms of tree stem basal area increment. Mixed-effects models were used to determine which tree- and plot-level variables were the main determinants of resistance, recovery and resilience, and to test for differences among the studied droughts. Larger trees were significantly less resistant and resilient. Plot basal area effects were only observed for resilience, with a negative impact only during the last drought. Resistance, recovery and resilience differed across the studied drought events, so that the studied populations became less resistant, less resilient and recovered worse during the last two droughts. This pattern suggests an increased vulnerability to drought after successive drought episodes.

Effects of prescribed burning on marsh-elevation change and the risk of wetland loss

USGS Publications Warehouse

McKee, Karen L.; Grace, James B.

2012-01-01

Marsh-elevation change is the net effect of biophysical processes controlling inputs versus losses of soil volume. In many marshes, accumulation of organic matter is an important contributor to soil volume and vertical land building. In this study, we examined how prescribed burning, a common marsh-management practice, may affect elevation dynamics in the McFaddin National Wildlife Refuge, Texas by altering organic-matter accumulation. Experimental plots were established in a brackish marsh dominated by Spartina patens, a grass found throughout the Gulf of Mexico and Atlantic marshes. Experimental plots were subjected to burning and nutrient-addition treatments and monitored for 3.5 years (April 2005 – November 2008). Half of the plots were burned once in 2006; half of the plots were fertilized seasonally with nitrogen, phosphorus, and potassium. Before and after the burns, seasonal measurements were made of soil physicochemistry, vegetation structure, standing and fallen plant biomass, aboveground and belowground production, decomposition, and accretion and elevation change (measured with Surface Elevation Tables (SET)). Movements in different soil strata (surface, root zone, subroot zone) were evaluated to identify which processes were contributing to elevation change. Because several hurricanes occurred during the study period, we also assessed how these storms affected elevation change rates. The main findings of this study were as follows: 1. The main drivers of elevation change were accretion on the marsh surface and subsurface movement below the root zone, but the relative influence of these processes varied temporally. Prior to Hurricanes Gustav and Ike (September 2008), the main driver was subsurface movement; after the hurricane, both accretion and subsurface movement were important. 2. Prior to Hurricanes Gustav and Ike, rates of elevation gain and accretion above a marker horizon were higher in burned plots compared to nonburned plots, whereas nutrient addition had no detectable influence on elevation dynamics. 3. Burning decreased standing and fallen plant litter, reducing fuel load. Hurricanes Gustav and Ike also removed fallen litter from all plots. 4. Aboveground and belowground production rates varied annually but were unaffected by burning and nutrient treatments. 5. Decomposition (of a standard cellulose material) in upper soil layers was increased in burned plots but was unaffected by nutrient treatments. 6. Soil physicochemistry was unaffected by burning or nutrient treatments. 7. The elevation deficit (difference between rate of submergence and vertical land development) prior to hurricanes was less in burned plots (6.2 millimeters per year [mm yr-1]) compared to nonburned plots (7.2 mm yr-1). 8. Storm sediments delivered by Hurricane Ike raised elevations an average of 7.4 centimeters (cm), which countered an elevation deficit that had accrued over 11 years. Our findings provide preliminary insights into elevation dynamics occurring in brackish marshes of the Texas Chenier Plain under prescribed fire management. The results of this study indicate that prescribed burning conducted at 3- to 5-year intervals is not likely to negatively impact the long-term sustainability of S. patens-dominated brackish marshes at McFaddin National Wildlife Refuge and may offset existing elevation deficits by ≈ 1 mm yr-1. The primary drivers of elevation change varied in time and space, leading to a more complex situation in terms of predicting how disturbances may alter elevation trajectories. The potential effect of burning on elevation change in other marshes will depend on several site-specific factors, including geomorphic/ sedimentary setting, tide range, local rate of relative sea level rise, plant species composition, additional management practices (for example, for flood control), and disturbance types and frequency (for example, hurricanes or herbivore grazing). Increasing the scope of inference would require installation of SETs in replicate marshes undergoing different prescribed fire intervals and in different geomorphic settings (with different hurricane frequencies and/or different sedimentary settings). Multiple locations along the Gulf and Atlantic coasts where prescribed fire is used as a management tool could provide the appropriate setting for these installations.

What Can We Learn About Karst Aquifer Heterogeneity From Pumping Tests

NASA Astrophysics Data System (ADS)

Marechal, J. C.; Dewandel, B.; Ladouche, B.; Fleury, P.

2016-12-01

Due to the complexity and duality of flows, well-test interpretation into karst systems constitutes a challenging task for hydrogeologists. This is especially true when the pumping well intersects karst heterogeneities such as the conduit network. The method of diagnostic plots, widely used in oil industry, can be applied to karst hydrogeology. In this paper, the classical response of a well-test into a karst conduit is described on a log-log drawdown derivative curve. It allows identifying successive flow regimes corresponding to the contribution of various karst aquifer subsystems (fractured matrix, karst conduit, main karst drainage network) to the pumped well. In heterogeneous karst systems, the log-log diagnostic plot of drawdown and its derivative in the pumping well can help identifying departures in flow-geometry from the classical homogeneous radial case. Classically, the diagnostic plot can be divided into several portions with: (a) early data used for identifying the karst conduit storage; (b) intermediate data for identifying the type of aquifer model that should be used (e.g. double porosity, anisotropy...); and (c) late data for identifying the possible boundaries. This is illustrated on three examples from Mediterranean karsts in southern France. A one-month duratio pumping test on a well intersecting the main karst drainage network of the Cent-Fonts karst system shows (i) a preliminary contribution of the karst conduit storage capacity followed by (ii) linear flows into the fractured matrix. A pumping test on a well intersecting a small karst conduit of the Corbières karst system shows the existence of (i) bi-linear flow within both the karst conduit and the fractured matrix at early times, followed by (ii) radial flows within the fractured matrix and (iii) finally the contribution of a major karst cavity. A two-months duration pumping test on a deep confined karst aquifer under low permeability rocks into the Gardanne basin shows the existence of no-flow boundary conditions due to the basin extension. The use of diagnostic plots allows identifying the various flow regimes during pumping tests, corresponding to the response of the individual karst aquifer subsystems. This is helpful for improving the understanding of the structure of the karst aquifer and flow exchanges between subsystems.

Multi-Scale Mapping of Vegetation Biomass

NASA Astrophysics Data System (ADS)

Hudak, A. T.; Fekety, P.; Falkowski, M. J.; Kennedy, R. E.; Crookston, N.; Smith, A. M.; Mahoney, P.; Glenn, N. F.; Dong, J.; Kane, V. R.; Woodall, C. W.

2016-12-01

Vegetation biomass mapping at multiple scales is important for carbon inventory and monitoring, reporting, and verification (MRV). Project-level lidar collections allow biomass estimation with high confidence where associated with field plot measurements. Predictive models developed from such datasets are customarily used to generate landscape-scale biomass maps. We tested the feasibility of predicting biomass in landscapes surveyed with lidar but without field plots, by withholding plot datasets from a reduced model applied to the landscapes, and found support for a generalized model in the northern Idaho ecoregion. We are also upscaling a generalized model to all forested lands in Idaho. Our regional modeling approach is to sample the 30-m biomass predictions from the landscape-scale maps and use them to train a regional biomass model, using Landsat time series, topographic derivatives, and climate variables as predictors. Our regional map validation approach is to aggregate the regional, annual biomass predictions to the county level and compare them to annual county-level biomass summarized independently from systematic, field-based, annual inventories conducted by the US Forest Inventory and Analysis (FIA) Program nationally. A national-scale forest cover map generated independently from 2010 PALSAR data at 25-m resolution is being used to mask non-forest pixels from the aggregations. Effects of climate change on future regional biomass stores are also being explored, using biomass estimates projected from stand-level inventory data collected in the National Forests and comparing them to FIA plot data collected independently on public and private lands, projected under the same climate change scenarios, with disturbance trends extracted from the Landsat time series. Our ultimate goal is to demonstrate, focusing on the ecologically diverse Northwest region of the USA, a carbon monitoring system (CMS) that is accurate, objective, repeatable, and transparent.

Sixth plot of the carcinogenic potency database: results of animal bioassays published in the General Literature 1989 to 1990 and by the National Toxicology Program 1990 to 1993.

PubMed Central

Gold, L S; Manley, N B; Slone, T H; Garfinkel, G B; Ames, B N; Rohrbach, L; Stern, B R; Chow, K

1995-01-01

This paper presents two types of information from the Carcinogenic Potency Database (CPDB): (a) the sixth chronological plot of analyses of long-term carcinogenesis bioassays, and (b) an index to chemicals in all six plots, including a summary compendium of positivity and potency for each chemical (Appendix 14). The five earlier plots of the CPDB have appeared in this journal, beginning in 1984 (1-5). Including the plot in this paper, the CPDB reports results of 5002 experiments on 1230 chemicals. This paper includes bioassay results published in the general literature between January 1989 and December 1990, and in Technical Reports of the National Toxicology Program between January 1990 and June 1993. Analyses are included on 17 chemicals tested in nonhuman primates by the Laboratory of Chemical Pharmacology, National Cancer Institute. This plot presents results of 531 long-term, chronic experiments of 182 test compounds and includes the same information about each experiment in the same plot format as the earlier papers: the species and strain of test animal, the route and duration of compound administration, dose level and other aspects of experimental protocol, histopathology and tumor incidence, TD50 (carcinogenic potency) and its statistical significance, dose response, author's opinion about carcinogenicity, and literature citation. We refer the reader to the 1984 publications (1,6,7) for a detailed guide to the plot of the database, a complete description of the numerical index of carcinogenic potency, and a discussion of the sources of data, the rationale for the inclusion of particular experiments and particular target sites, and the conventions adopted in summarizing the literature. The six plots of the CPDB are to be used together since results of individual experiments that were published earlier are not repeated. Appendix 14 is designed to facilitate access to results on all chemicals. References to the published papers that are the source of experimental data are reported in each of the published plots. For readers using the CPDB extensively, a combined plot is available of all results from the six separate plot papers, ordered alphabetically by chemical; the combined plot in printed form or on computer tape or diskette is available from the first author. A SAS database is also available. PMID:8741772

Measuring larval nematode contamination on cattle pastures: Comparing two herbage sampling methods.

PubMed

Verschave, S H; Levecke, B; Duchateau, L; Vercruysse, J; Charlier, J

2015-06-15

Assessing levels of pasture larval contamination is frequently used to study the population dynamics of the free-living stages of parasitic nematodes of livestock. Direct quantification of infective larvae (L3) on herbage is the most applied method to measure pasture larval contamination. However, herbage collection remains labour intensive and there is a lack of studies addressing the variation induced by the sampling method and the required sample size. The aim of this study was (1) to compare two different sampling methods in terms of pasture larval count results and time required to sample, (2) to assess the amount of variation in larval counts at the level of sample plot, pasture and season, respectively and (3) to calculate the required sample size to assess pasture larval contamination with a predefined precision using random plots across pasture. Eight young stock pastures of different commercial dairy herds were sampled in three consecutive seasons during the grazing season (spring, summer and autumn). On each pasture, herbage samples were collected through both a double-crossed W-transect with samples taken every 10 steps (method 1) and four random located plots of 0.16 m(2) with collection of all herbage within the plot (method 2). The average (± standard deviation (SD)) pasture larval contamination using sampling methods 1 and 2 was 325 (± 479) and 305 (± 444)L3/kg dry herbage (DH), respectively. Large discrepancies in pasture larval counts of the same pasture and season were often seen between methods, but no significant difference (P = 0.38) in larval counts between methods was found. Less time was required to collect samples with method 2. This difference in collection time between methods was most pronounced for pastures with a surface area larger than 1 ha. The variation in pasture larval counts from samples generated by random plot sampling was mainly due to the repeated measurements on the same pasture in the same season (residual variance component = 6.2), rather than due to pasture (variance component = 0.55) or season (variance component = 0.15). Using the observed distribution of L3, the required sample size (i.e. number of plots per pasture) for sampling a pasture through random plots with a particular precision was simulated. A higher relative precision was acquired when estimating PLC on pastures with a high larval contamination and a low level of aggregation compared to pastures with a low larval contamination when the same sample size was applied. In the future, herbage sampling through random plots across pasture (method 2) seems a promising method to develop further as no significant difference in counts between the methods was found and this method was less time consuming. Copyright © 2015 Elsevier B.V. All rights reserved.

Tannat grape composition responses to spatial variability of temperature in an Uruguay's coastal wine region

NASA Astrophysics Data System (ADS)

Fourment, Mercedes; Ferrer, Milka; González-Neves, Gustavo; Barbeau, Gérard; Bonnardot, Valérie; Quénol, Hervé

2017-09-01

Spatial variability of temperature was studied in relation to the berry basic composition and secondary compounds of the Tannat cultivar at harvest from vineyards located in Canelones and Montevideo, the most important wine region of Uruguay. Monitoring of berries and recording of temperature were performed in 10 commercial vineyards of Tannat situated in the southern coastal wine region of the country for three vintages (2012, 2013, and 2014). Results from a multivariate correlation analysis between berry composition and temperature over the three vintages showed that (1) Tannat responses to spatial variability of temperature were different over the vintages, (2) correlations between secondary metabolites and temperature were higher than those between primary metabolites, and (3) correlation values between berry composition and climate variables increased when ripening occurred under dry conditions (below average rainfall). For a particular studied vintage (2013), temperatures explained 82.5% of the spatial variability of the berry composition. Daily thermal amplitude was found to be the most important spatial mode of variability with lower values recorded at plots nearest to the sea and more exposed to La Plata River. The highest levels in secondary compounds were found in berries issued from plots situated as far as 18.3 km from La Plata River. The increasing knowledge of temperature spatial variability and its impact on grape berry composition contributes to providing possible issues to adapt grapevine to climate change.

Spatial scale and sampling resolution affect measures of gap disturbance in a lowland tropical forest: implications for understanding forest regeneration and carbon storage

PubMed Central

Lobo, Elena; Dalling, James W.

2014-01-01

Treefall gaps play an important role in tropical forest dynamics and in determining above-ground biomass (AGB). However, our understanding of gap disturbance regimes is largely based either on surveys of forest plots that are small relative to spatial variation in gap disturbance, or on satellite imagery, which cannot accurately detect small gaps. We used high-resolution light detection and ranging data from a 1500 ha forest in Panama to: (i) determine how gap disturbance parameters are influenced by study area size, and the criteria used to define gaps; and (ii) to evaluate how accurately previous ground-based canopy height sampling can determine the size and location of gaps. We found that plot-scale disturbance parameters frequently differed significantly from those measured at the landscape-level, and that canopy height thresholds used to define gaps strongly influenced the gap-size distribution, an important metric influencing AGB. Furthermore, simulated ground surveys of canopy height frequently misrepresented the true location of gaps, which may affect conclusions about how relatively small canopy gaps affect successional processes and contribute to the maintenance of diversity. Across site comparisons need to consider how gap definition, scale and spatial resolution affect characterizations of gap disturbance, and its inferred importance for carbon storage and community composition. PMID:24452032

Selecting the optimum plot size for a California design-based stream and wetland mapping program.

PubMed

Lackey, Leila G; Stein, Eric D

2014-04-01

Accurate estimates of the extent and distribution of wetlands and streams are the foundation of wetland monitoring, management, restoration, and regulatory programs. Traditionally, these estimates have relied on comprehensive mapping. However, this approach is prohibitively resource-intensive over large areas, making it both impractical and statistically unreliable. Probabilistic (design-based) approaches to evaluating status and trends provide a more cost-effective alternative because, compared with comprehensive mapping, overall extent is inferred from mapping a statistically representative, randomly selected subset of the target area. In this type of design, the size of sample plots has a significant impact on program costs and on statistical precision and accuracy; however, no consensus exists on the appropriate plot size for remote monitoring of stream and wetland extent. This study utilized simulated sampling to assess the performance of four plot sizes (1, 4, 9, and 16 km(2)) for three geographic regions of California. Simulation results showed smaller plot sizes (1 and 4 km(2)) were most efficient for achieving desired levels of statistical accuracy and precision. However, larger plot sizes were more likely to contain rare and spatially limited wetland subtypes. Balancing these considerations led to selection of 4 km(2) for the California status and trends program.

A computational model of selection by consequences: log survivor plots.

PubMed

Kulubekova, Saule; McDowell, J J

2008-06-01

[McDowell, J.J, 2004. A computational model of selection by consequences. J. Exp. Anal. Behav. 81, 297-317] instantiated the principle of selection by consequences in a virtual organism with an evolving repertoire of possible behaviors undergoing selection, reproduction, and mutation over many generations. The process is based on the computational approach, which is non-deterministic and rules-based. The model proposes a causal account for operant behavior. McDowell found that the virtual organism consistently showed a hyperbolic relationship between response and reinforcement rates according to the quantitative law of effect. To continue validation of the computational model, the present study examined its behavior on the molecular level by comparing the virtual organism's IRT distributions in the form of log survivor plots to findings from live organisms. Log survivor plots did not show the "broken-stick" feature indicative of distinct bouts and pauses in responding, although the bend in slope of the plots became more defined at low reinforcement rates. The shape of the virtual organism's log survivor plots was more consistent with the data on reinforced responding in pigeons. These results suggest that log survivor plot patterns of the virtual organism were generally consistent with the findings from live organisms providing further support for the computational model of selection by consequences as a viable account of operant behavior.

Forest Clearcutting and Site Preparation on a Saline Soil in East Texas: Impacts on Water Quality

Treesearch

Matthew McBroom; Mingteh Chang; Alexander K. Sayok

2002-01-01

Three 0.02 hectare plot-watersheds were installed on a saline soil in the Davy Crockett National Forest near Apple Springs, Texas. Each plot was installed with an H-flume, FW-1 automatic water level recorder, Coshocton N-1 runoff sampler, and two storage tanks. One watershed was undisturbed forested and served a control, one was clearcut without any site-preparation,...

A spatial econometric analysis of land-use change with land cover trends data: an application to the Pacific Northwest

Treesearch

David J. Lewis; Ralph J. Alig

2014-01-01

This paper develops a plot-level spatial econometric land-use model and estimates it with U.S. Geological Survey Land Cover Trends (LCT) geographic information system panel data for the western halves of the states of Oregon and Washington. The discrete-choice framework we use models plot-scale choices of the three dominant land uses in this region: forest, agriculture...

Individual-tree basal area growth, survival, and total height models for upland hardwoods in the Boston Mountains of Arkansa

Treesearch

Paul A. Murphy; David L. Graney

1988-01-01

Models were developed for individual-tree basal area growth, survival, and total heights for different species of upland hardwoods in the Boston Mountains of north Arkansas. Data used were from 87 permanent plots located in an array of different sites and stand ages; the plots were thinned to different stocking levels and included unthinned controls. To test these...

The storage capacity of cocoa seeds (Theobroma cacao L.) through giving Polyethylene Glycol (PEG) in the various of storage container

NASA Astrophysics Data System (ADS)

Lahay, R. R.; Misrun, S.; Sipayung, R.

2018-02-01

Cocoa is plant which it’s seed character is recalcitrant. Giving PEG and using various of storage containers was hoped to increase storage capacity of cocoa seeds as long as period of saving. The reseach was aimed to identify the storage capacity of cocoa seeds through giving PEG in the various of storage containers. Research took place in Hataram Jawa II, Kabupaten Simalungun, Propinsi Sumatera Utara, Indonesia. The method of this research is spit-split plot design with 3 replication. Storage period was put on main plot which was consisted of 4 level, PEG concentration was put on sub plot, consisted of 4 level and storage container was put on the sub sub plot consisted of 3 types. The results showed that until 4 days at storage with 45 % PEG concentration at all storage container, percentage of seed germination at storage can be decreased to be 2.90 %, and can be defensed until 16 days with 45 % PEG concentration at perforated plastic storage container. Percentage of molded seeds and seed moisture content were increased with added period of storage but seed moisture content was increased until 12 days at storage and was decreased at 16 days in storage.

[Runoff Pollution Experiments of Paddy Fields Under Different Irrigation Patterns].

PubMed

Zhou, Jing-wen; Su, Bao-lin; Huang, Ning-bo; Guan, Yu-tang; Zhao, Kun

2016-03-15

To study runoff and non-point source pollution of paddy fields and to provide a scientific basis for agricultural water management of paddy fields, paddy plots in the Jintan City and the Liyang City were chosen for experiments on non-point source pollution, and flood irrigation and intermittent irrigation patterns were adopted in this research. The surface water level and rainfall were observed during the growing season of paddies, and the runoff amount from paddy plots and loads of total nitrogen (TN) and total phosphorus (TP) were calculated by different methods. The results showed that only five rain events of totally 27 rainfalls and one artificially drainage formed non-point source pollution from flood irrigated paddy plot, which resulted in a TN export coefficient of 49.4 kg · hm⁻² and a TP export coefficient of 1.0 kg · hm⁻². No any runoff event occurred from the paddy plot with intermittent irrigation even in the case of maximum rainfall of 95.1 mm. Runoff from paddy fields was affected by water demands of paddies and irrigation or drainage management, which was directly correlated to surface water level, rainfall amount and the lowest ridge height of outlets. Compared with the flood irrigation, intermittent irrigation could significantly reduce non-point source pollution caused by rainfall or artificial drainage.

Experimental evidence of large changes in terrestrial chlorine cycling following altered tree species composition.

PubMed

Montelius, Malin; Thiry, Yves; Marang, Laura; Ranger, Jacques; Cornelis, Jean-Thomas; Svensson, Teresia; Bastviken, David

2015-04-21

Organochlorine molecules (Clorg) are surprisingly abundant in soils and frequently exceed chloride (Cl(-)) levels. Despite the widespread abundance of Clorg and the common ability of microorganisms to produce Clorg, we lack fundamental knowledge about how overall chlorine cycling is regulated in forested ecosystems. Here we present data from a long-term reforestation experiment where native forest was cleared and replaced with five different tree species. Our results show that the abundance and residence times of Cl(-) and Clorg after 30 years were highly dependent on which tree species were planted on the nearby plots. Average Cl(-) and Clorg content in soil humus were higher, at experimental plots with coniferous trees than in those with deciduous trees. Plots with Norway spruce had the highest net accumulation of Cl(-) and Clorg over the experiment period, and showed a 10 and 4 times higher Cl(-) and Clorg storage (kg ha(-1)) in the biomass, respectively, and 7 and 9 times higher storage of Cl(-) and Clorg in the soil humus layer, compared to plots with oak. The results can explain why local soil chlorine levels are frequently independent of atmospheric deposition, and provide opportunities for improved modeling of chlorine distribution and cycling in terrestrial ecosystems.

Emerald Ash Borer Threat Reveals Ecohydrologic Feedbacks in Northern U.S. Black Ash Wetlands

NASA Astrophysics Data System (ADS)

Diamond, J.; Mclaughlin, D. L.; Slesak, R.

2016-12-01

Hydrology is a primary driver of wetland structure and process that can be modified by abiotic and biotic feedbacks, leading to self-organization of wetland systems. Large-scale disturbance to these feedbacks, such as loss of vegetation, can thus be expected to impact wetland hydrology. The Emerald Ash Borer is an invasive beetle that is expected to cause widespread-loss of ash trees throughout the northern U.S. and Canada. To predict ecosystem response to this threat of vegetation loss, we ask if and how Black Ash (Fraxinus nigra), a ubiquitous facultative-wetland ash species, actively controls wetland hydrology to determine if Black Ash creates favorable hydrologic regimes for growth (i.e., evidence for ecohydrologic feedbacks). We do this by taking advantage of plot-level tree removal experiments in Black Ash-dominated (75-100% basal area) wetlands in the Chippewa National Forest, Minnesota. The monospecies dominance in these systems minimizes variation associated with species-specific effects, allowing for clearer interpretation of results regarding ecohydrologic feedbacks. Here, we present an analysis of six years of water table and soil moisture time series in experimental plots with the following treatments: 1) clear cut, 2) girdling, 3) group-selection thinning, and 4) control. We also present evapotranspiration (ET) time series estimates for each experimental plot using analysis of diel water level variation. Results show elevated water tables in treatment plots relative to control plots for all treatments for several years after treatments were applied, with differences as great as 50 cm. Some recovery of water table to pre-treatment levels was observed over time, but only the group-selection thinning treatment showed near-complete recovery to pre-treatment levels, and clear-cut treatments indicate sustained elevated water tables over five years. Differences among treatments are directly attributed to variably reduced ET relative to controls. Results also indicate changes to the ET vs. water table relationship among treatments, with implications for ET feedbacks to favorable hydrologic regimes for growth. Finally, we present a conceptual model for these ecosystems and discuss how the model will be used to explore ecohydrologic feedbacks in upcoming years.

Assessment at full scale of nozzle/wing geometry effects on OTW aero-acoustic characteristics. [short takeoff aircraft noise

NASA Technical Reports Server (NTRS)

Groesbeck, D.; Vonglahn, U.

1979-01-01

The effects on acoustic characteristics of nozzle type and location on a wing for STOL engine over-the-wing configurations are assessed at full scale on the basis of model-scale data. Three types of nozzle configurations are evaluated: a circular nozzle with external deflector mounted above the wing, a slot nozzle with external deflector mounted on the wing and a slot nozzle mounted on the wing. Nozzle exhaust plane locations with respect to the wing leading edge are varied from 10 to 46 percent chord (flaps retracted) with flap angles of 20 (takeoff altitude) and 60 (approach attitude). Perceived noise levels (PNL) are calculated as a function of flyover distance at 152 m altitude. From these plots, static EPNL values, defined as flyover relative noise levels, are calculated and plotted as a function of lift and thrust ratios. From such plots the acoustic benefits attributable to variations in nozzle/deflector/wing geometry at full scale are assessed for equal aerodynamic performance.

Modelling Water Flow through Paddy Soils under Alternate Wetting and Drying Irrigation Practice

NASA Astrophysics Data System (ADS)

Shekhar, S.; Mailapalli, D. R.; Das, B. S.; Raghuwanshi, N. S.

2017-12-01

Alternate wetting and drying (AWD) irrigation practice in paddy cultivation requires an optimum soil moisture stress (OSMS) level at which irrigation water savings can be maximized without compromising the yield reduction. Determining OSMS experimentally is challenging and only possible with appropriate modeling tools. In this study, field experiments on paddy were conducted in thirty non-weighing type lysimeters during dry seasons of 2016 and 2017. Ten plots were irrigated using continuous flooding (CF) and the rest were irrigated with AWD practice at 40mb and 75mb soil moisture stress levels. Depth of ponding and soil suction at 10, 40 and 70 cm from the soil surface were measured daily from all lysimeter plots. The measured field data were used in calibration and validation of Hydrus-1D model and simulated the water flow for both AWD and CF plots. The Hydrus-1D is being used to estimate OSMS for AWD practice and compared the seasonal irrigation water input and deep percolation losses with CF practice.

How to regress and predict in a Bland-Altman plot? Review and contribution based on tolerance intervals and correlated-errors-in-variables models.

PubMed

Francq, Bernard G; Govaerts, Bernadette

2016-06-30

Two main methodologies for assessing equivalence in method-comparison studies are presented separately in the literature. The first one is the well-known and widely applied Bland-Altman approach with its agreement intervals, where two methods are considered interchangeable if their differences are not clinically significant. The second approach is based on errors-in-variables regression in a classical (X,Y) plot and focuses on confidence intervals, whereby two methods are considered equivalent when providing similar measures notwithstanding the random measurement errors. This paper reconciles these two methodologies and shows their similarities and differences using both real data and simulations. A new consistent correlated-errors-in-variables regression is introduced as the errors are shown to be correlated in the Bland-Altman plot. Indeed, the coverage probabilities collapse and the biases soar when this correlation is ignored. Novel tolerance intervals are compared with agreement intervals with or without replicated data, and novel predictive intervals are introduced to predict a single measure in an (X,Y) plot or in a Bland-Atman plot with excellent coverage probabilities. We conclude that the (correlated)-errors-in-variables regressions should not be avoided in method comparison studies, although the Bland-Altman approach is usually applied to avert their complexity. We argue that tolerance or predictive intervals are better alternatives than agreement intervals, and we provide guidelines for practitioners regarding method comparison studies. Copyright © 2016 John Wiley & Sons, Ltd. Copyright © 2016 John Wiley & Sons, Ltd.

Impacts of fire on sources of soil CO2 efflux in a dry Amazon rain forest.

PubMed

Metcalfe, Daniel B; Rocha, Wanderley; Balch, Jennifer K; Brando, Paulo M; Doughty, Christopher E; Malhi, Yadvinder

2018-05-10

Fire at the dry southern margin of the Amazon rainforest could have major consequences for regional soil carbon (C) storage and ecosystem carbon dioxide (CO 2 ) emissions, but relatively little information exists about impacts of fire on soil C cycling within this sensitive ecotone. We measured CO 2 effluxes from different soil components (ground surface litter, roots, mycorrhizae, soil organic matter) at a large-scale burn experiment designed to simulate a severe but realistic potential future scenario for the region (Fire plot) in Mato Grosso, Brazil, over one year, and compared these measurements to replicated data from a nearby, unmodified Control plot. After four burns over five years, soil CO 2 efflux (R s ) was ~ 5.5 t C ha -1 yr -1 lower on the Fire plot compared to the Control. Most of the Fire plot R s reduction was specifically due to lower ground surface litter and root respiration. Mycorrhizal respiration on both plots was around ~ 20% of R s . Soil surface temperature appeared to be more important than moisture as a driver of seasonal patterns in R s at the site. Regular fire events decreased the seasonality of R s at the study site, due to apparent differences in environmental sensitivities among biotic and abiotic soil components. These findings may contribute towards improved predictions of the amount and temporal pattern of C emissions across the large areas of tropical forest facing increasing fire disturbances associated with climate change and human activities. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

ADS's Dexter Data Extraction Applet

NASA Astrophysics Data System (ADS)

Demleitner, M.; Accomazzi, A.; Eichhorn, G.; Grant, C. S.; Kurtz, M. J.; Murray, S. S.

The NASA Astrophysics Data System (ADS) now holds 1.3 million scanned pages, containing numerous plots and figures for which the original data sets are lost or inaccessible. The availability of scans of the figures can significantly ease the regeneration of the data sets. For this purpose, the ADS has developed Dexter, a Java applet that supports the user in this process. Dexter's basic functionality is to let the user manually digitize a plot by marking points and defining the coordinate transformation from the logical to the physical coordinate system. Advanced features include automatic identification of axes, tracing lines and finding points matching a template. This contribution both describes the operation of Dexter from a user's point of view and discusses some of the architectural issues we faced during implementation.

Expected accuracy in a measurement of the CKM angle alpha using a Dalitz plot analysis of B0 ---> rho pi decays in the BTeV project

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shestermanov, K.E.; Vasiliev, A.N; /Serpukhov, IHEP

2005-12-01

A precise measurement of the angle {alpha} in the CKM triangle is very important for a complete test of Standard Model. A theoretically clean method to extract {alpha} is provided by B{sup 0} {yields} {rho}{pi} decays. Monte Carlo simulations to obtain the BTeV reconstruction efficiency and to estimate the signal to background ratio for these decays were performed. Finally the time-dependent Dalitz plot analysis, using the isospin amplitude formalism for tre and penguin contributions, was carried out. It was shown that in one year of data taking BTeV could achieve an accuracy on {alpha} better than 5{sup o}.

A Performance Comparison on the Probability Plot Correlation Coefficient Test using Several Plotting Positions for GEV Distribution.

NASA Astrophysics Data System (ADS)

Ahn, Hyunjun; Jung, Younghun; Om, Ju-Seong; Heo, Jun-Haeng

2014-05-01

It is very important to select the probability distribution in Statistical hydrology. Goodness of fit test is a statistical method that selects an appropriate probability model for a given data. The probability plot correlation coefficient (PPCC) test as one of the goodness of fit tests was originally developed for normal distribution. Since then, this test has been widely applied to other probability models. The PPCC test is known as one of the best goodness of fit test because it shows higher rejection powers among them. In this study, we focus on the PPCC tests for the GEV distribution which is widely used in the world. For the GEV model, several plotting position formulas are suggested. However, the PPCC statistics are derived only for the plotting position formulas (Goel and De, In-na and Nguyen, and Kim et al.) in which the skewness coefficient (or shape parameter) are included. And then the regression equations are derived as a function of the shape parameter and sample size for a given significance level. In addition, the rejection powers of these formulas are compared using Monte-Carlo simulation. Keywords: Goodness-of-fit test, Probability plot correlation coefficient test, Plotting position, Monte-Carlo Simulation ACKNOWLEDGEMENTS This research was supported by a grant 'Establishing Active Disaster Management System of Flood Control Structures by using 3D BIM Technique' [NEMA-12-NH-57] from the Natural Hazard Mitigation Research Group, National Emergency Management Agency of Korea.

The effects of experimental irrigation on plant productivity, insect abundance and the non-breeding season performance of a migratory songbird.

PubMed

Wilson, Scott; Marra, Peter P; Sillett, T Scott

2013-01-01

Migratory bird populations are often limited by food during the non-breeding season. Correlative evidence suggests that food abundance on territories varies among years in relation to rainfall, which affects plant productivity and arthropod biomass. At the Font Hill Nature Preserve in Jamaica, we used an irrigation experiment to test the hypothesis that rainfall affects the condition of wintering American redstarts (Setophaga ruticilla) via intermediate effects on plant productivity and arthropod abundance. Experimental plots were irrigated in late February and early March to simulate a mid-season pulse of 200 mm of rain. Irrigation maintained soil moisture levels near saturation and had immediate effects on plant productivity. Cumulative leaf abscission over the dry season was 50% lower on experimental plots resulting in greater canopy cover, and we observed significantly higher ground level shoot growth and the flushing of new leaves on about 58% of logwood (Haematoxylon campechianum) individuals. Arthropod biomass was 1.5 times higher on irrigated plots, but there was considerable inter-plot variability within a treatment and a strong seasonal decline in biomass. Consequently, we found no significant effect of irrigation on arthropod abundance or redstart condition. We suspect that the lack of an irrigation effect for taxa higher on the trophic chain was due to the small spatial scale of the treatment relative to the scale at which these taxa operate. Although redstart condition was not affected, we did observe turnover from subordinate to dominant territorial individuals on experimental plots suggesting a perceived difference in habitat quality that influenced individual behavior.

Van Allen Probes Science Gateway: Single-Point Access to Long-Term Radiation Belt Measurements and Space Weather Nowcasting

NASA Astrophysics Data System (ADS)

Romeo, G.; Barnes, R. J.; Ukhorskiy, A. Y.; Sotirelis, T.; Stephens, G.

2017-12-01

The Science Gateway gives single-point access to over 4.5 years of comprehensive wave and particle measurements from the Van Allen Probes NASA twin-spacecraft mission. The Gateway provides a set of visualization and data analysis tools including: HTML5-based interactive visualization of high-level data products from all instrument teams in the form of: line plots, orbital content plots, dynamical energy spectra, L-shell context plots (including two-spacecraft plotting), FFT spectra of wave data, solar wind and geomagnetic indices data, etc.; download custom multi-instrument CDF data files of selected data products; publication quality plots of digital data; combined orbit predicts for mission planning and coordination including: Van Allen Probes, MMS, THEMIS, Arase (ERG), Cluster, GOES, Geotail, FIREBIRD; magnetic footpoint calculator for coordination with LEO and ground-based assets; real-time computation and processing of empirical magnetic field models - computation of magnetic ephemeris, computation of adiabatic invariants. Van Allen Probes is the first spacecraft mission to provide a nowcast of the radiation environment in the heart of the radiation belts, where the radiation levels are the highest and most dangerous for spacecraft operations. For this purpose, all instruments continuously broadcast a subset of their science data in real time. Van Allen Probes partners with four foreign institutions who operate ground stations that receive the broadcast: Korea (KASI), the Czech republic (CAS), Argentina (CONAE), and Brazil (INPE). The SpWx broadcast is then collected at APL and delivered to the community via the Science Gateway.

NMR-based metabonomic analysis of the hepatotoxicity induced by combined exposure to PCBs and TCDD in rats

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lu Chunfeng; Department of Pharmacology, Basic Medical College, Jiamusi University, Jiamusi 154007; Wang Yimei

2010-11-01

A metabonomic approach using {sup 1}H NMR spectroscopy was adopted to investigate the metabonomic pattern of rat urine after oral administration of environmental endocrine disruptors (EDs) polychlorinated biphenyls (PCBs) and 2,3,7,8-tetrachlorodibenzo- p-dioxin (TCDD) alone or in combination and to explore the possible hepatotoxic mechanisms of combined exposure to PCBs and TCDD. {sup 1}H NMR spectra of urines collected 24 h before and after exposure were analyzed via pattern recognition by using principal component analysis (PCA). Serum biochemistry and liver histopathology indicated significant hepatotoxicity in the rats of the combined group. The PCA scores plots of urinary {sup 1}H NMR datamore » showed that all the treatment groups could be easily distinguished from the control group, so could the PCBs or TCDD group and the combined group. The loadings plots of the PCA revealed remarkable increases in the levels of lactate, glucose, taurine, creatine, and 2-hydroxy-isovaleric acid and reductions in the levels of 2-oxoglutarate, citrate, succinate, hippurate, and trimethylamine-N-oxide in rat urine after exposure. These changes were more striking in the combined group. The changed metabolites may be considered possible biomarker for the hepatotoxicity. The present study demonstrates that combined exposure to PCBs and TCDD induced significant hepatotoxicity in rats, and mitochondrial dysfunction and fatty acid metabolism perturbations might contribute to the hepatotoxicity. There was good conformity between changes in the urine metabonomic pattern and those in serum biochemistry and liver histopathology. These results showed that the NMR-based metabonomic approach may provide a promising technique for the evaluation of the combined toxicity of EDs.« less

Chronic nutrient enrichment increases prevalence and severity of coral disease and bleaching.

PubMed

Vega Thurber, Rebecca L; Burkepile, Deron E; Fuchs, Corinne; Shantz, Andrew A; McMinds, Ryan; Zaneveld, Jesse R

2014-02-01

Nutrient loading is one of the strongest drivers of marine habitat degradation. Yet, the link between nutrients and disease epizootics in marine organisms is often tenuous and supported only by correlative data. Here, we present experimental evidence that chronic nutrient exposure leads to increases in both disease prevalence and severity and coral bleaching in scleractinian corals, the major habitat-forming organisms in tropical reefs. Over 3 years, from June 2009 to June 2012, we continuously exposed areas of a coral reef to elevated levels of nitrogen and phosphorus. At the termination of the enrichment, we surveyed over 1200 scleractinian corals for signs of disease or bleaching. Siderastrea siderea corals within enrichment plots had a twofold increase in both the prevalence and severity of disease compared with corals in unenriched control plots. In addition, elevated nutrient loading increased coral bleaching; Agaricia spp. of corals exposed to nutrients suffered a 3.5-fold increase in bleaching frequency relative to control corals, providing empirical support for a hypothesized link between nutrient loading and bleaching-induced coral declines. However, 1 year later, after nutrient enrichment had been terminated for 10 months, there were no differences in coral disease or coral bleaching prevalence between the previously enriched and control treatments. Given that our experimental enrichments were well within the ranges of ambient nutrient concentrations found on many degraded reefs worldwide, these data provide strong empirical support to the idea that coastal nutrient loading is one of the major factors contributing to the increasing levels of both coral disease and coral bleaching. Yet, these data also suggest that simple improvements to water quality may be an effective way to mitigate some coral disease epizootics and the corresponding loss of coral cover in the future. © 2013 John Wiley & Sons Ltd.

Mechanisms for Success after Long-term Nutrient Enrichment in a Boreal Forest Understory

PubMed Central

Grainger, Tess Nahanni; Turkington, Roy

2013-01-01

Global levels of reactive nitrogen are predicted to rise in the coming decades as a result of increased deposition from the burning of fossil fuels and the large-scale conversion of nitrogen into a useable form for agriculture. Many plant communities respond strongly to increases in soil nitrogen, particularly in northern ecosystems where nitrogen levels are naturally very low. An experiment in northern Canada that was initiated in 1990 has been investigating the effects of long-term nutrient enrichment (fertilizer added annually) on a boreal forest understory community. We used this experiment to investigate why some species increase in abundance under nutrient enrichment whereas others decline. We focused on four species that differed in their responses to fertilization: Mertensia paniculata and Epilobium angustifolium increased in abundance, Achillea millefolium remained relatively constant and Festuca altaica declined. We hypothesized that the two species that were successful in the new high-nutrient, light-limited environment would be taller, have higher specific leaf area, change phenology by growing earlier in the season and be more morphologically plastic than their less successful counterparts. We compared plant height, specific leaf area, growth spurt date and allocation to leaves in plants grown in control and fertilized plots. We demonstrated that each of the two species that came to dominate fertilized plots has a different combination of traits and responses that likely gave them a competitive advantage; M. paniculata has the highest specific leaf area of the four species whereas E. angustifolium is tallest and exhibits morphological plasticity when fertilized by increasing biomass allocation to leaves. These results indicate that rather than one strategy determining success when nutrients become available, a variety of traits and responses may contribute to a species' ability to persist in a nutrient-enriched boreal forest understory. PMID:23573298

Understanding the genetic diversity, spatial genetic structure and mating system at the hierarchical levels of fruits and individuals of a continuous Theobroma cacao population from the Brazilian Amazon.

PubMed

Silva, C R S; Albuquerque, P S B; Ervedosa, F R; Mota, J W S; Figueira, A; Sebbenn, A M

2011-06-01

Understanding the mating patterns of populations of tree species is a key component of ex situ genetic conservation. In this study, we analysed the genetic diversity, spatial genetic structure (SGS) and mating system at the hierarchical levels of fruits and individuals as well as pollen dispersal patterns in a continuous population of Theobroma cacao in Pará State, Brazil. A total of 156 individuals in a 0.56 ha plot were mapped and genotyped for nine microsatellite loci. For the mating system analyses, 50 seeds were collected from nine seed trees by sampling five fruits per tree (10 seeds per fruit). Among the 156 individuals, 127 had unique multilocus genotypes, and the remaining were clones. The population was spatially aggregated; it demonstrated a significant SGS up to 15 m that could be attributed primarily to the presence of clones. However, the short seed dispersal distance also contributed to this pattern. Population matings occurred mainly via outcrossing, but selfing was observed in some seed trees, which indicated the presence of individual variation for self-incompatibility. The matings were also correlated, especially within (Ρ(p(m))=0.607) rather than among the fruits (Ρ(p(m))=0.099), which suggested that a small number of pollen donors fertilised each fruit. The paternity analysis suggested a high proportion of pollen migration (61.3%), although within the plot, most of the pollen dispersal encompassed short distances (28 m). The determination of these novel parameters provides the fundamental information required to establish long-term ex situ conservation strategies for this important tropical species.

Understanding the genetic diversity, spatial genetic structure and mating system at the hierarchical levels of fruits and individuals of a continuous Theobroma cacao population from the Brazilian Amazon

PubMed Central

Silva, C R S; Albuquerque, P S B; Ervedosa, F R; Mota, J W S; Figueira, A; Sebbenn, A M

2011-01-01

Understanding the mating patterns of populations of tree species is a key component of ex situ genetic conservation. In this study, we analysed the genetic diversity, spatial genetic structure (SGS) and mating system at the hierarchical levels of fruits and individuals as well as pollen dispersal patterns in a continuous population of Theobroma cacao in Pará State, Brazil. A total of 156 individuals in a 0.56 ha plot were mapped and genotyped for nine microsatellite loci. For the mating system analyses, 50 seeds were collected from nine seed trees by sampling five fruits per tree (10 seeds per fruit). Among the 156 individuals, 127 had unique multilocus genotypes, and the remaining were clones. The population was spatially aggregated; it demonstrated a significant SGS up to 15 m that could be attributed primarily to the presence of clones. However, the short seed dispersal distance also contributed to this pattern. Population matings occurred mainly via outcrossing, but selfing was observed in some seed trees, which indicated the presence of individual variation for self-incompatibility. The matings were also correlated, especially within (r̂p(m)=0.607) rather than among the fruits (r̂p(m)=0.099), which suggested that a small number of pollen donors fertilised each fruit. The paternity analysis suggested a high proportion of pollen migration (61.3%), although within the plot, most of the pollen dispersal encompassed short distances (28 m). The determination of these novel parameters provides the fundamental information required to establish long-term ex situ conservation strategies for this important tropical species. PMID:21139632

Desert shrub responses to experimental modification of precipitation seasonality and soil depth: relationship to the two-layer model and ecohydrological niche

USGS Publications Warehouse

Germino, Matthew J.; Reinhardt, Keith

2013-01-01

1. Ecohydrological niches are important for understanding plant community responses to climate shifts, particularly in dry lands. According to the two-layer hypothesis, selective use of deep-soil water increases growth or persistence of woody species during warm and dry summer periods and thereby contributes to their coexistence with shallow-rooted herbs in dry ecosystems. The resource-pool hypothesis further suggests that shallow-soil water benefits growth of all plants while deep-soil water primarily enhances physiological maintenance and survival of woody species. Few studies have directly tested these by manipulating deep-soil water availability and observing the long-term outcomes. 2. We predicted that factors promoting infiltration and storage of water in deep soils, specifically greater winter precipitation and soil depth, would enhance Artemisia tridentata (big sagebrush) in cold, winter-wet/summer-dry desert. Sagebrush responses to 20 years of winter irrigation were compared to summer- or no irrigation, on plots having relatively deep or shallow soils (2 m vs. 1 m depths). 3. Winter irrigation increased sagebrush cover, and crown and canopy volumes, but not density (individuals/plot) compared to summer or no irrigation, on deep-soil plots. On shallow-soil plots, winter irrigation surprisingly decreased shrub cover and size, and summer irrigation had no effect. Furthermore, multiple regression suggested that the variations in growth were related (i) firstly to water in shallow soils (0-0.2 m) and secondly to deeper soils (> 1 m deep) and (ii) more by springtime than by midsummer soil water. Water-use efficiency increased considerably on shallow soils without irrigation and was lowest with winter irrigation. 4. Synthesis. Sagebrush was more responsive to the seasonal timing of precipitation than to total annual precipitation. Factors that enhanced deep-water storage (deeper soils plus more winter precipitation) led to increases in Artemisia tridentata that were consistent with the two-layer hypothesis, and the contribution of shallow water to growth on these plots was consistent with the resource-pool hypothesis. However, shallow-soil water also had negative effects on sagebrush, suggesting an ecohydrological trade-off not considered in these or related theories. The interaction between precipitation timing and soil depth indicates that increased winter precipitation could lead to a mosaic of increases and decreases in A. tridentata across landscapes having variable soil depth.

Exploring canopy structure and function as a potential mechanism of sustain carbon sequestration in aging forests

NASA Astrophysics Data System (ADS)

Fotis, A. T.; Curtis, P.; Ricart, R.

2013-12-01

The notion that old-growth forests reach carbon neutrality has recently been challenged, but the mechanisms responsible for continued productivity have remained elusive. Increases in canopy structural complexity, defined by high horizontal and vertical variability in leaf distribution (rugosity), has been proposed as a mechanism for sustained high rates of above ground net primary production (ANPPw) in forests up to ~170 years by enhancing light use efficiency (LUE) and nitrogen use efficiency (NUE). However, a detailed understanding of how rugosity affects resource distribution within and among trees leading to greater LUE and NUE is not known. We propose that leaves in high rugosity plots receive greater photosynthetic photon flux density (PPFD) than leaves in low rugosity plots, causing shifts from shade- to sun- adapted leaves into deeper portions of the canopy, which is thought to increase the photosynthetic capacity of individuals and lead to higher carbon assimilation in forests. The goal of this research was to: 1) quantify different canopy structural characteristics using a portable canopy LiDAR (PCL) and; 2) assess how these structural characteristics affect resource distribution and subsequent changes in leaf morphological, physiological and biochemical traits in three broadleaf species (e.g., Acer rubrum, Quercus rubra and Fagus grandifolia) and one conifer species (e.g., Pinus strobus) at different levels in the canopy in plots with similar leaf are index (LAI) but highly contrasting rugosity levels. We found that gap fraction had a strong positive correlation with rugosity. High rugosity plots had a bimodal distribution of LAI that was concentrated at the top and bottom of the canopy with an open midstory (between 10-50% of total canopy height) whereas low rugosity plots had a more even distribution of leaves. Leaf mass per area (LMA) of all broadleaved species had a strong positive correlation with cumulative gap fraction (P. strobus had a relatively weaker, but strong positive correlation). On average, Q. rubra and F. grandifolia had greater LMA in high rugosity plots while LMA was greater for A. rubrum and P. strobus in low rugosity plots. These findings suggest that species are responding differently to canopy structural complexity and that leaf arrangement in space plays an important role in determining leaf level traits. Furthermore, this research demonstrates that PCL can be used for quick identification of canopy traits (e.g., average LMA) relevant to photosynthetic capacity, and thus, carbon sequestration potential, and therefore may become an important tool in forest management.

Water use and water use efficiency after thinning in Aleppo pine plantation in Southwest of Valencia, Spain

NASA Astrophysics Data System (ADS)

Fernandes, Tarcísio José Gualberto; Damaso Del Campo, Antonio; Gonzáles-Sanchís, María

2014-05-01

Mediterranean forests need a proactive adaptive silviculture in the face of global change, being their water-use (WU) and water use efficiency (WUE) the key factors to forest managers. Thinning, as a silvicultural practice, has the potential to alter the water potential gradients that exist between soil and canopy. As a result, a change in the amount of water used by trees is produced. The aim of this study is to analyse the effects of the adaptive silviculture on the water-use and water-use efficiency. To that end, both WU and WUE, are measured in an Aleppo pine plantation, where different thinning intensities were applied. The experimental set-up consisted of four plots, three of them corresponding to thinning treatments in 2008 at different intensities High, Middle and Low plus an unthinned plot - control. Additionally, a plot next to the treatment, thinned with High intensity in 1998 was sampled to assess the longer-term effects of thinning. The plots are located at Southwest of Valencia-Spain. WU was measured in four trees per plot on the period April 2009 to May 2011 using HRM sapflow-sensors. WUE was described following the Carbon stable isotope theory by a dendrochronological approach. A stable isotope analysis was performed in the same trees used to measure sapflow. The analysed rings were those correspondent to the 3 previous years to the thinning, and the following after the treatment. The results from this study indicate that stand WU is significantly different (p<0.05) in each tested treatment, being higher in control plot, followed by Low, Medium and Heavy treatments. However, considering only the tree, the average WU was higher in the Heavy treatment. No significantly differences were found between low and control trees. The dendrochronological analyses showed a general variability in ring width during the initial growth (first 15 years). In the following years, the ring widths were very small, probably conditioned by climate conditions. However, immediately after thinning, all trees showed a significant increase when compared with control. The WUE show different patterns in dry and wet years, and between thinned and control plots. The correlation between WU and WUE was higher in the thinned plots than in control plot. Different patterns of the relationship between WUE and WU were found during years 2009 and 2010. A positive slope was found in thinned plots during 2008 (Low, Medium and Heavy), while negative slope was described in Heavy thinning 1998 and Control plots. In conclusion the reactions after thinning equally promote an increase in WU (tree transpiration), growth and WUE. However in the control plot the increase of WU produces a decrease of WUE. This probably responds to the lower rate of growth found in this plot. This study shows clearly the impacts of thinning in forest growth, water use and water use efficiency. Some of the effects of thinning have been pointed out in other studies. However, this study introduce a novel contribution relating WU to WUE in a Mediterranean Aleppo pine plantation.

Growth and Productivity Response of Hybrid Rice to Application of Animal Manures, Plant Residues and Phosphorus

PubMed Central

Amanullah; Khan, Shams-ul-Tamraiz; Iqbal, Asif; Fahad, Shah

2016-01-01

The objective of this research was to evaluate the impact of organic sources (animal manures vs. plant residues at the rate of 10 t ha−1 each) on the productivity of hybrid rice (Oryza sativa L.) production under different levels of phosphorus (0, 30, 60, and 90 kg P ha−1) fertilization. Two separate field experiments were conducted. In experiment (1), impact of three animal manures sources (cattle, sheep, and poultry manures) and P levels were studied along with one control plot (no animal manure and P applied) was investigated. In experiment (2), three plant residues sources (peach leaves, garlic residues, and wheat straw) and P levels were studied along with one control plot (no plant residues and P applied). Both the experiments were carried out on small land farmer field at District Swabi, Khyber Pakhtunkhwa Province (Northwest Pakistan) during summer 2015. The results revealed that in both experiments the control plot had significantly (p ≤ 0.05) less productivity than the average of all treated plots with organic sources and P level. The increase in P levels in both experiments (animal manure vs. plant residues) resulted in higher rice productivity (90 > 60 > 30 > 0 kg P ha−1). In the experiment under animal manures, application of poultry manure increased rice productivity as compared with sheep and cattle manures (poultry > sheep > cattle manures). In the experiment under plant residues, application of peach leaves or garlic residues had higher rice productivity than wheat straw (peach leaves = garlic residues > wheat straw). On average, rice grown under animal manures produced about 20% higher grain yield than rice grown under crop residues. We conclude from this study that application of 90 kg P ha−1 along with combined application of animal manures, especially poultry manure increases rice productivity. Also, the use of either garlic residues or peach leaves, never applied before as organic manures, can increase crop productivity and will help in degraded soil for sustainable soil management. PMID:27803701

Soil biota in an ungrazed grassland: Response to annual grass (Bromus tectorum) invasion

USGS Publications Warehouse

Belnap, Jayne; Phillips, Susan L.

2001-01-01

Bromus tectorum is an exotic annual grass that currently dominates many western U.S. semi-arid ecosystems, and the effects of this grass on ecosystems in general, and soil biota specifically, are unknown. Bromus recently invaded two ungrazed and unburned perennial bunchgrass communities in southeastern Utah. This study compared the soil food-web structure of the two native grassland associations (Stipa [S] and Hilaria [H]), with and without the presence of Bromus. Perennial grass and total vascular-plant cover were higher in S than in H plots, while quantities of ground litter were similar. Distribution of live and dead plant material was highly clumped in S and fairly homogenous in H. Soil food-web structure was different between H and S, with lower trophic levels more abundant in H and higher trophic levels more abundant in S. In Bromus-invaded plots, the quantity of ground litter was 2.2 times higher in Hilaria–Bromus (HB) than in H plots, and 2.8 times higher in Stipa–Bromus (SB) than in S plots. Soil biota in HB generally responded to the Bromus invasion in an opposite manner than in SB, e.g., if a given component of the food web increased in one community, it generally decreased in the other. Active bacteria decreased in H vs. HB, while increasing in S vs. SB. Soil and live plant-infecting fungi were the exception, as they increased in both types of invaded plots relative to uninvaded plots. Dead-plant-infecting fungi decreased in H vs. HB and increased in S vs. SB. Most higher-trophic-level organisms increased in HB relative to H, while decreasing in SB relative to S. Given the mixed response to invasion, the structure of these soil food webs appears to be controlled by both plant inputs and internal dynamics between trophic levels. When compared to non-invaded sites, soil and soil food-web characterisitics of the newly invaded sites included: (1) lower species richness and lower absolute numbers of fungi and invertebrates; (2) greater abundance of active bacteria; (3) similar species of bacteria and fungi as those found in soils invaded over 50 yr ago; (4) higher levels of silt (thus greater fertility and soil water-holding capacity); and (5) a more continuous cover of living and dead plant material (thus facilitating germination of the large-seeded Bromus). These results illustrate that (1) soil food-web structure can vary widely within what would generally be considered one vegetation type (semi-arid grassland), depending on plant species composition within that type, and (2) addition of a common resource can evoke disparate responses from individual food-web compartments, depending on their original structure.

A randomized comparison between league tables and funnel plots to inform health care decision-making.

PubMed

Anell, Anders; Hagberg, Oskar; Liedberg, Fredrik; Ryden, Stefan

2016-12-01

Comparison of provider performance is commonly used to inform health care decision-making. Little attention has been paid to how data presentations influence decisions. This study analyzes differences in suggested actions by decision-makers informed by league tables or funnel plots. Decision-makers were invited to a survey and randomized to compare hospital performance using either league tables or funnel plots for four different measures within the area of cancer care. For each measure, decision-makers were asked to suggest actions towards 12-16 hospitals (no action, ask for more information, intervene) and provide feedback related to whether the information provided had been useful. Swedish health care. Two hundred and twenty-one decision-makers at administrative and clinical levels. Data presentations in the form of league tables or funnel plots. Number of actions suggested by participants. Proportion of appropriate actions. For all four measures, decision-makers tended to suggest more actions based on the information provided in league tables compared to funnel plots (44% vs. 21%, P < 0.001). Actions were on average more appropriate for funnel plots. However, when using funnel plots, decision-makers more often missed to react even when appropriate. The form of data presentation had an influence on decision-making. With league tables, decision-makers tended to suggest more actions compared to funnel plots. A difference in sensitivity and specificity conditioned by the form of presentation could also be identified, with different implications depending on the purpose of comparisons. Explanations and visualization aids are needed to support appropriate actions. © The Author 2016. Published by Oxford University Press in association with the International Society for Quality in Health Care. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com

Temporal changes in soil water repellency after a forest fire in a Mediterranean calcareous soil: Influence of ash and different vegetation type.

PubMed

Jiménez-Pinilla, P; Lozano, E; Mataix-Solera, J; Arcenegui, V; Jordán, A; Zavala, L M

2016-12-01

Forest fires usually modify soil water repellency (SWR), and its persistence and intensity show a high variability both in space and time. This research studies the evolution of SWR in a Mediterranean calcareous soil affected by a forest fire, which occurred in Gorga (SE Spain) in July 2011, comparing the effect of the main vegetation cover between pine (Pinus halepensis) and shrubs species (Quercus coccifera, Rosmarinus officinalis, Cistus albidus, Erica arborea and Brachypodium retusum) and the relationship with soil moisture content (SMC). Also the study analyzed the effect of ash on SWR dynamics under field conditions. Six plots were established on the fire-affected area and the unburned-control-adjacent area to monitoring SWR with the water drop penetration time (WDPT) test, SMC through moist sensors (5cm depth) and three different ash treatments: ash presence, ash absence and incorporation of ash into the soil. An immediate increase of SWR was observed in the fire-affected area, mainly in pine plots. SWR changes in control (unburned) plots were quite similar between different types of vegetation influence, despite higher SWR values being observed on pine plots during the study period. A noticeable decrease of SWR was observed during the first months after fire in the affected areas, especially after the first rainy period, both in pine and shrubs plots. SWR increase was registered in all plots, and the highest levels were in March 2012 in burned pine plots. SWR decrease was higher in plots where ash was removed. Fire-affected soils became wettable 1year and a half after the fire. Copyright © 2015 Elsevier B.V. All rights reserved.

Ungulates increase forest plant species richness to the benefit of non-forest specialists.

PubMed

Boulanger, Vincent; Dupouey, Jean-Luc; Archaux, Frédéric; Badeau, Vincent; Baltzinger, Christophe; Chevalier, Richard; Corcket, Emmanuel; Dumas, Yann; Forgeard, Françoise; Mårell, Anders; Montpied, Pierre; Paillet, Yoan; Picard, Jean-François; Saïd, Sonia; Ulrich, Erwin

2018-02-01

Large wild ungulates are a major biotic factor shaping plant communities. They influence species abundance and occurrence directly by herbivory and plant dispersal, or indirectly by modifying plant-plant interactions and through soil disturbance. In forest ecosystems, researchers' attention has been mainly focused on deer overabundance. Far less is known about the effects on understory plant dynamics and diversity of wild ungulates where their abundance is maintained at lower levels to mitigate impacts on tree regeneration. We used vegetation data collected over 10 years on 82 pairs of exclosure (excluding ungulates) and control plots located in a nation-wide forest monitoring network (Renecofor). We report the effects of ungulate exclusion on (i) plant species richness and ecological characteristics, (ii) and cover percentage of herbaceous and shrub layers. We also analyzed the response of these variables along gradients of ungulate abundance, based on hunting statistics, for wild boar (Sus scrofa), red deer (Cervus elaphus) and roe deer (Capreolus capreolus). Outside the exclosures, forest ungulates maintained higher species richness in the herbaceous layer (+15%), while the shrub layer was 17% less rich, and the plant communities became more light-demanding. Inside the exclosures, shrub cover increased, often to the benefit of bramble (Rubus fruticosus agg.). Ungulates tend to favour ruderal, hemerobic, epizoochorous and non-forest species. Among plots, the magnitude of vegetation changes was proportional to deer abundance. We conclude that ungulates, through the control of the shrub layer, indirectly increase herbaceous plant species richness by increasing light reaching the ground. However, this increase is detrimental to the peculiarity of forest plant communities and contributes to a landscape-level biotic homogenization. Even at population density levels considered to be harmless for overall plant species richness, ungulates remain a conservation issue for plant community composition. ©2017 The Authors. Global Change Biology Published by John Wiley & Sons Ltd.

Image matching as a data source for forest inventory - Comparison of Semi-Global Matching and Next-Generation Automatic Terrain Extraction algorithms in a typical managed boreal forest environment

NASA Astrophysics Data System (ADS)

Kukkonen, M.; Maltamo, M.; Packalen, P.

2017-08-01

Image matching is emerging as a compelling alternative to airborne laser scanning (ALS) as a data source for forest inventory and management. There is currently an open discussion in the forest inventory community about whether, and to what extent, the new method can be applied to practical inventory campaigns. This paper aims to contribute to this discussion by comparing two different image matching algorithms (Semi-Global Matching [SGM] and Next-Generation Automatic Terrain Extraction [NGATE]) and ALS in a typical managed boreal forest environment in southern Finland. Spectral features from unrectified aerial images were included in the modeling and the potential of image matching in areas without a high resolution digital terrain model (DTM) was also explored. Plot level predictions for total volume, stem number, basal area, height of basal area median tree and diameter of basal area median tree were modeled using an area-based approach. Plot level dominant tree species were predicted using a random forest algorithm, also using an area-based approach. The statistical difference between the error rates from different datasets was evaluated using a bootstrap method. Results showed that ALS outperformed image matching with every forest attribute, even when a high resolution DTM was used for height normalization and spectral information from images was included. Dominant tree species classification with image matching achieved accuracy levels similar to ALS regardless of the resolution of the DTM when spectral metrics were used. Neither of the image matching algorithms consistently outperformed the other, but there were noticeably different error rates depending on the parameter configuration, spectral band, resolution of DTM, or response variable. This study showed that image matching provides reasonable point cloud data for forest inventory purposes, especially when a high resolution DTM is available and information from the understory is redundant.

CCD Astrometric Measurements of WDS 00420-5547 MLO 1

NASA Astrophysics Data System (ADS)

Kith, Camerin; Wilson, Jake; Agro, Sam; Toms, Sarah; Andreski, Bella; Torrance, Emily; Tock, Kalée.

2018-01-01

The position angle and separation of WDS 00420-5547 MLO 1 has been measured and noted in 20 publications since Robert Lewis Ellery’s initial observation in 1877. This system was observed using the R-COP robotic telescope in Australia, which is part of the Skynet Robotic Telescope Network. Their small separation made it difficult to resolve the two stars, except for the lowest-exposure-time images (5 seconds and 10 seconds) using a small measuring aperture (3-4 pixel aperture radius). AstroImageJ software was used to reduce the data and contribute a new measurement: position angle 165° ± 0.63 (1± SEM) and separation ?= 6.0 arc sec ± 0.12 (1 ± SEM) on 2017.093 (Besselian date). The observation was plotted along with the past observations using the Desmos plotting tool, which allows the date to be displayed next to each position of the secondary. Despite the fact that these stars are a Common Proper Motion pair, the data and plot do not currently support classification of this system as one that is gravitationally bound.

Induction treatments for acute promyelocytic leukemia: a network meta-analysis

PubMed Central

Zhang, Qiaoxia; Lou, Jin; Cai, Yun; Chen, Weihong; Du, Xin

2016-01-01

Background 9 treatments for acute promyelocytic leukemia (APL) have been compared in many randomized controlled trials (RCT). The conclusions have been inconsistent and the purpose of this study is to conduct a network meta-analysis. Results Rankings of event-free survival are ATRA+RIF (81.2%), ATRA+ATO (69.6%), ATO (50.6%). Rankings of complete remission are ATRA+RIF (79.3%), ATRA+ATO (64.8%), RIF (60.3%), ATO (55.9%). Rankings of avoiding differentiation syndromes are CT (84.3%), ATO (80.3%), RIF (71.6%), ATRA+RIF (49%), ATRA+ATO (40.8%). Methods A total of 1,666 patients from 12 RCTs were enrolled. The frequentist method was used. Relative risks with 95% confidence intervals were calculated. We produced a network plot, a contribution plot, and a forest plot predictive intervals. The inconsistency factor, the surface under the cumulative ranking curve and the publication bias were evaluated. Conclusions ATRA+ATO is eligible to be the first-line treatment for APL. ATRA+RIF is a prospective alternative to the first-line treatment. RIF or ATO should be reconsidered as another option for de novo APL. PMID:27713127

Double-regge exchange limit for the γp→ K⁺K⁻p reaction

DOE PAGES

Shi, M.; Danilkin, I. V.; Fernández-Ramírez, C.; ...

2015-02-01

We apply the generalized Veneziano model (B₅ model) in the double-Regge exchange limit to the γp→K⁺K⁻p reaction. Four different cases defined by the possible combinations of the signature factors of leading Regge exchanges ((K *,a₂/f₂), (K *,ρ/ω), (K *₂,a₂/f₂), and (K *₂,ρ/ω)) have been simulated through the Monte Carlo method. Suitable event candidates for the double-Regge exchange high-energy limit were selected employing Van Hove plots as a better alternative to kinematical cuts in the K⁺K⁻p Dalitz plot. In this way we predict and analyze the double-Regge contribution to the K⁺K⁻p Dalitz plot, which constitutes one of the major backgrounds inmore » the search for strangeonia, hybrids and exotics using γp→K⁺K⁻p reaction. We expect that data currently under analysis, and that to come in the future, will allow verification of the double-Regge behavior and a better assessment of this component of the amplitude.« less

Tracking Servobridge Detector. Volume 1

DTIC Science & Technology

1976-12-15

34 _ - b[ Section 1 ABSTRACT 1.0 General This report is in three volumes - Volume I describes technically the Tracking Servo Bridge Detector in final...28 4.1.9.2 Typical Pulse Generator ....... ............... ... 29 4.1.10 Unlock Alarm .......... ..................... .... 30 4.1.11.1 DC...46 4.3.8.4 RF Oucput Harmonic Distortion vs. Frequency Plot . . .. 48 4.3.8.5 Generator Input Level Limits vs. Frequency Plot. . . .. 49 4.3.8.6 RF

Scale and Sampling Effects on Floristic Quality

PubMed Central

2016-01-01

Floristic Quality Assessment (FQA) is increasingly influential for making land management decisions, for directing conservation policy, and for research. But, the basic ecological properties and limitations of its metrics are ill defined and not well understood–especially those related to sample methods and scale. Nested plot data from a remnant tallgrass prairie sampled annually over a 12-year period, were used to investigate FQA properties associated with species detection rates, species misidentification rates, sample year, and sample grain/area. Plot size had no apparent effect on Mean C (an area’s average Floristic Quality level), nor did species detection levels above 65% detection. Simulated species misidentifications only affected Mean C values at greater than 10% in large plots, when the replaced species were randomly drawn from the broader county-wide species pool. Finally, FQA values were stable over the 12-year study, meaning that there was no evidence that the metrics exhibit year effects. The FQA metric Mean C is demonstrated to be robust to varied sample methodologies related to sample intensity (plot size, species detection rate), as well as sample year. These results will make FQA measures even more appealing for informing land-use decisions, policy, and research for two reasons: 1) The sampling effort needed to generate accurate and consistent site assessments with FQA measures is shown to be far lower than what has previously been assumed, and 2) the stable properties and consistent performance of metrics with respect to sample methods will allow for a remarkable level of comparability of FQA values from different sites and datasets compared to other commonly used ecological metrics. PMID:27489959

Forest-Observation-System.net - towards a global in-situ data repository for biomass datasets validation

NASA Astrophysics Data System (ADS)

Shchepashchenko, D.; Chave, J.; Phillips, O. L.; Davies, S. J.; Lewis, S. L.; Perger, C.; Dresel, C.; Fritz, S.; Scipal, K.

2017-12-01

Forest monitoring is high on the scientific and political agenda. Global measurements of forest height, biomass and how they change with time are urgently needed as essential climate and ecosystem variables. The Forest Observation System - FOS (http://forest-observation-system.net/) is an international cooperation to establish a global in-situ forest biomass database to support earth observation and to encourage investment in relevant field-based observations and science. FOS aims to link the Remote Sensing (RS) community with ecologists who measure forest biomass and estimating biodiversity in the field for a common benefit. The benefit of FOS for the RS community is the partnering of the most established teams and networks that manage permanent forest plots globally; to overcome data sharing issues and introduce a standard biomass data flow from tree level measurement to the plot level aggregation served in the most suitable form for the RS community. Ecologists benefit from the FOS with improved access to global biomass information, data standards, gap identification and potential improved funding opportunities to address the known gaps and deficiencies in the data. FOS closely collaborate with the Center for Tropical Forest Science -CTFS-ForestGEO, the ForestPlots.net (incl. RAINFOR, AfriTRON and T-FORCES), AusCover, Tropical managed Forests Observatory and the IIASA network. FOS is an open initiative with other networks and teams most welcome to join. The online database provides open access for both metadata (e.g. who conducted the measurements, where and which parameters) and actual data for a subset of plots where the authors have granted access. A minimum set of database values include: principal investigator and institution, plot coordinates, number of trees, forest type and tree species composition, wood density, canopy height and above ground biomass of trees. Plot size is 0.25 ha or large. The database will be essential for validating and calibrating satellite observations and various models.

Vegetation and floristics of a lowland tropical rainforest in northeast Australia

PubMed Central

Apgaua, Deborah M. G.; Campbell, Mason J; Cox, Casey J; Crayn, Darren M; Ishida, Françoise Y; Laidlaw, Melinda J; Liddell, Michael J; Seager, Michael; Laurance, Susan G. W.

2016-01-01

Abstract Background Full floristic data, tree demography, and biomass estimates incorporating non-tree lifeforms are seldom collected and reported for forest plots in the tropics. Established research stations serve as important repositories of such biodiversity and ecological data. With a canopy crane setup within a tropical lowland rainforest estate, the 42-ha Daintree Rainforest Observatory (DRO) in Cape Tribulation, northern Australia is a research facility of international significance. We obtained an estimate of the vascular plant species richness for the site, by surveying all vascular plant species from various mature-phase, remnant and open vegetation patches within the site. We also integrate and report the demography and basal areas of trees ≥ 10 cm diameter at breast height (dbh) in a new 1-ha core plot, an extension to the pre-existing forest 1-ha plot under the canopy crane. In addition, we report for the canopy crane plot new demography and basal areas for smaller-size shrubs and treelets subsampled from nine 20 m2 quadrats, and liana basal area and abundance from the whole plot. The DRO site has an estimated total vascular plant species richness of 441 species, of which 172 species (39%) are endemic to Australia, and 4 species are endemics to the Daintree region. The 2 x 1-ha plots contains a total of 262 vascular plant species of which 116 (1531 individuals) are tree species ≥ 10 cm dbh. We estimate a stem basal area of 34.9 m2 ha-1, of which small stems (tree saplings and shrubs <10cm dbh) and lianas collectively contribute c.4.2%. Comparing the stem density-diversity patterns of the DRO forest with other tropical rainforests globally, our meta-analysis shows that DRO forests has a comparatively high stem density and moderate species diversity, due to the influence of cyclones. These data will provide an important foundation for ecological and conservation studies in lowland tropical forest. New information We present a floristic checklist, a lifeform breakdown, and demography data from two 1-ha rainforest plots from a lowland tropical rainforest study site. We also present a meta-analysis of stem densities and species diversity from comparable-sized plots across the tropics. PMID:27099552

Graphical analysis of power systems for mobile robotics

NASA Astrophysics Data System (ADS)

Raade, Justin William

The field of mobile robotics places stringent demands on the power system. Energetic autonomy, or the ability to function for a useful operation time independent of any tether, refueling, or recharging, is a driving force in a robot designed for a field application. The focus of this dissertation is the development of two graphical analysis tools, namely Ragone plots and optimal hybridization plots, for the design of human scale mobile robotic power systems. These tools contribute to the intuitive understanding of the performance of a power system and expand the toolbox of the design engineer. Ragone plots are useful for graphically comparing the merits of different power systems for a wide range of operation times. They plot the specific power versus the specific energy of a system on logarithmic scales. The driving equations in the creation of a Ragone plot are derived in terms of several important system parameters. Trends at extreme operation times (both very short and very long) are examined. Ragone plot analysis is applied to the design of several power systems for high-power human exoskeletons. Power systems examined include a monopropellant-powered free piston hydraulic pump, a gasoline-powered internal combustion engine with hydraulic actuators, and a fuel cell with electric actuators. Hybrid power systems consist of two or more distinct energy sources that are used together to meet a single load. They can often outperform non-hybrid power systems in low duty-cycle applications or those with widely varying load profiles and long operation times. Two types of energy sources are defined: engine-like and capacitive. The hybridization rules for different combinations of energy sources are derived using graphical plots of hybrid power system mass versus the primary system power. Optimal hybridization analysis is applied to several power systems for low-power human exoskeletons. Hybrid power systems examined include a fuel cell and a solar panel coupled with lithium polymer batteries. In summary, this dissertation describes the development and application of two graphical analysis tools for the intuitive design of mobile robotic power systems. Several design examples are discussed involving human exoskeleton power systems.

Performance of One-Class Classifiers for Invasive Species Mapping using Hyperspectral Remote Sensing

NASA Astrophysics Data System (ADS)

Skowronek, S.; Asner, G. P.; Feilhauer, H.

2016-12-01

Reliable distribution maps are crucial for the monitoring and management of invasive plant species. Remote sensing can provide such maps for larger areas. However, most remote sensing approaches focus on species in a prominent phenological stage, and a systematic assessment of the performance of different one-class classifiers for mapping species in a more inconspicuous phenological stage is missing so far. In this study, we used hyperspectral remote sensing data to detect the invasive grass Phalaris aquatica and the invasive herb Centaurea solstitialisin a pre-flowering stage in the Jasper Ridge Biological Preserve in California. We collected presence-only data, 66 plots for C. solstitialis and 30 plots for P. aquatica, to calibrate a distribution model and additional presence-absence data (166 / 173 plots) to validate model performance. All plots have a size of 3 m x 3 m. The hyperspectral remote sensing imagery was acquired using the Carnegie Airborne Observatory (CAO) visible to shortwave infrared (VSWIR) imaging spectrometer (400-2500 nm range) in May 2015 with a ground sampling distance (pixel size) of 1 m x 1 m. To find the best approach for mapping these species, we compared the performance of three different state-of-the-art classifiers working with presence-only data: Maxent, biased support vector machines and boosted regression trees. The resulting overall accuracies were 72 - 74% for C. solstitialis, and 83 - 88% for P. aquatica. For both species the overall performance was slightly better for Maxent and BRT than for biased SVM. The detection rates for low cover plots were considerably higher for C. solstitialis than for P. aquatica. For C. solstitalis, they ranged between 71 and 75% for plots with less than 15% cover, highlighting the potential of remote sensing to contribute to an early detection. The models relied on different areas of the spectrum, but still produced the same general pattern, which implies that more than one property of a species or a mixed plot can be used to create a viable model. We conclude that the different one-class classifiers we tested do allow detecting the target species in a more inconspicuous phenological stage, with similar success rates.

Management of Cosmopolites sordidus and Metamasius hemipterus in banana by pheromone-based mass trapping.

PubMed

Alpizar, D; Fallas, M; Oehlschlager, A C; Gonzalez, L M

2012-03-01

Mass trapping Cosmopolites sordidus (Coleoptera, Curculionidae) using a pheromone-baited pitfall trap and Metamasius hemipterus (Coleoptera, Curculionidae) using a pheromone-sugarcane-baited open gallon trap was conducted in commercial banana. Four traps for each insect per hectare were placed in each of two 5-hectare plots of banana. Two additional 5-hectare plots were designated as controls and treated according to the plantation protocol. Capture rates of C. sordidus and M. hemipterus declined by >75 % over 10-12 months. In the banana growing region studied, corm damage was due primarily to C. sordidus, while only a minor amount of damage was attributable to M. hemipterus. Corm damage reduction in trapping plots was, thus, attributed primarily to C. sordidus trapping. In trapping plots, corm damage decreased by 61-64 % during the experiment. Banana bunch weights increased 23 % relative to control plots after 11-12 months of trapping. Fruit diameter did not vary between bunches harvested from trapping plots vs. control plots. Plant vigor, however, as determined by stem circumference at one meter above ground increased in plots with traps compared to control plots. Trapping for C. sordidus in two plantations of over 200 hectares each, reduced corm damage 62-86 % relative to pre-trapping levels. Insecticide control measures in place when the experiment commenced resulted in about 20-30 % corm damage, while use of pheromone trapping to manage C. sordidus lowered corm damage to 10 % or less. It is estimated that the increase in value of increased yield obtained in this trial (23 %) is about $4,240 USD per year per hectare, while the cost of pheromone trapping is approximately $185 USD per year per hectare. The trapping program becomes revenue neutral if bunch weights increase by an average of 1 % per year of trapping. Approximately 10 % of all plantation area in Costa Rica use the pheromone trapping system described here. The system also is used in Martinique, Guadeloupe, and the Canary Islands.

Visual evaluation of kinetic characteristics of PET probe for neuroreceptors using a two-phase graphic plot analysis.

PubMed

Ito, Hiroshi; Ikoma, Yoko; Seki, Chie; Kimura, Yasuyuki; Kawaguchi, Hiroshi; Takuwa, Hiroyuki; Ichise, Masanori; Suhara, Tetsuya; Kanno, Iwao

2017-05-01

Objectives In PET studies for neuroreceptors, tracer kinetics are described by the two-tissue compartment model (2-TCM), and binding parameters, including the total distribution volume (V T ), non-displaceable distribution volume (V ND ), and binding potential (BP ND ), can be determined from model parameters estimated by kinetic analysis. The stability of binding parameter estimates depends on the kinetic characteristics of radioligands. To describe these kinetic characteristics, we previously developed a two-phase graphic plot analysis in which V ND and V T can be estimated from the x-intercept of regression lines for early and delayed phases, respectively. In this study, we applied this graphic plot analysis to visual evaluation of the kinetic characteristics of radioligands for neuroreceptors, and investigated a relationship between the shape of these graphic plots and the stability of binding parameters estimated by the kinetic analysis with 2-TCM in simulated brain tissue time-activity curves (TACs) with various binding parameters. Methods 90-min TACs were generated with the arterial input function and assumed kinetic parameters according to 2-TCM. Graphic plot analysis was applied to these simulated TACs, and the curvature of the plot for each TAC was evaluated visually. TACs with several noise levels were also generated with various kinetic parameters, and the bias and variation of binding parameters estimated by kinetic analysis were calculated in each TAC. These bias and variation were compared with the shape of graphic plots. Results The graphic plots showed larger curvature for TACs with higher specific binding and slower dissociation of specific binding. The quartile deviations of V ND and BP ND determined by kinetic analysis were smaller for radioligands with slow dissociation. Conclusions The larger curvature of graphic plots for radioligands with slow dissociation might indicate a stable determination of V ND and BP ND by kinetic analysis. For investigation of the kinetics of radioligands, such kinetic characteristics should be considered.

Climatic stress increases forest fire severity across the western United States

Treesearch

Phillip J. van Mantgem; Jonathan C.B. Nesmith; MaryBeth Keifer; Eric E. Knapp; Alan Flint; Lorriane Flint

2013-01-01

Pervasive warming can lead to chronic stress on forest trees, which may contribute to mortality resulting from fire-caused injuries. Longitudinal analyses of forest plots from across the western US show that high pre-fire climatic water deficit was related to increased post-fire tree mortality probabilities. This relationship between climate and fire was present after...

Plant species coalition groups of Zion National Park: An individualistic, floristic alternative to vegetation classification

Treesearch

Jeffrey E. Ott; Stewart C. Sanderson; E. Durant McArthur

2015-01-01

Vegetation surveys at Zion National Park (Zion), Utah, have contributed to our understanding of plant community patterns and their relationship to environmental factors. Previous authors used vegetation plot data to characterize vegetation types at Zion following conventional procedures that emphasize spatial discreteness and dominant species. We developed and applied...

Modeling the Contribution of Ephemeral Gully Erosion Under Different Soil Management in An Olive Orchard Microcatchment Using AnnAGNPS Model

EPA Science Inventory

In Spain, few studies have been carried out to explore the erosion caused by processes other than interrill and rill erosion, such as gully and ephemeral gully erosion, especially because most of the available studies have evaluated the erosion at plot scale. A study about the en...

Compositional shifts in Costa Rican forests due to climate-driven species migrations.

PubMed

Feeley, Kenneth J; Hurtado, Johanna; Saatchi, Sassan; Silman, Miles R; Clark, David B

2013-11-01

Species are predicted to shift their distributions upslope or poleward in response to global warming. This prediction is supported by a growing number of studies documenting species migrations in temperate systems but remains poorly tested for tropical species, and especially for tropical plant species. We analyzed changes in tree species composition in a network of 10 annually censused 1-ha plots spanning an altitudinal gradient of 70-2800 m elevation in Costa Rica. Specifically, we combined plot data with herbarium records (accessed through GBIF) to test if the plots' community temperature scores (CTS, average thermal mean of constituent species weighted by basal area) have increased over the past decade as is predicted by climate-driven species migrations. In addition, we quantified the contributions of stem growth, recruitment, and mortality to the observed patterns. Supporting our a priori hypothesis of upward species migrations, we found that there have been consistent directional shifts in the composition of the plots, such that the relative abundance of lowland species, and hence CTS, increased in 90% of plots. The rate of the observed compositional shifts corresponds to a mean thermal migration rate (TMR) of 0.0065 °C yr(-1) (95% CI = 0.0005-0.0132 °C yr(-1) ). While the overall TMR is slower than predicted based on concurrent regional warming of 0.0167 °C yr(-1) , migrations were on pace with warming in 4 of the 10 plots. The observed shifts in composition were driven primarily by mortality events (i.e., the disproportionate death of highland vs. lowland species), suggesting that individuals of many tropical tree species will not be able to tolerate future warming and thus their persistence in the face of climate change will depend on successful migrations. Unfortunately, in Costa Rica and elsewhere, land area inevitably decreases at higher elevations; hence, even species that are able to migrate successfully will face heightened risks of extinction. © 2013 John Wiley & Sons Ltd.

Effects of soil water table regime on tree community species richness and structure of alluvial forest fragments in Southeast Brazil.

PubMed

Silva, A C; Higuchi, P; van den Berg, E

2010-08-01

In order to determine the influence of soil water table fluctuation on tree species richness and structure of alluvial forest fragments, 24 plots were allocated in a point bar forest and 30 plots in five forest fragments located in a floodplain, in the municipality of São Sebastião da Bela Vista, Southeast Brazil, totalizing 54, 10 X 20 m, plots. The information recorded in each plot were the soil water table level, diameter at breast height (dbh), total height and botanical identity off all trees with dbh > 5 cm. The water table fluctuation was assessed through 1 m deep observation wells in each plot. Correlations analysis indicated that sites with shallower water table in the flooding plains had a low number of tree species and high tree density. Although the water table in the point bar remained below the wells during the study period, low tree species richness was observed. There are other events taking place within the point bar forest that assume a high ecological importance, such as the intensive water velocity during flooding and sedimentation processes.

[Study on extraction method of Panax notoginseng plots in Wenshan of Yunnan province based on decision tree model].

PubMed

Shi, Ting-Ting; Zhang, Xiao-Bo; Guo, Lan-Ping; Huang, Lu-Qi

2017-11-01

The herbs used as the material for traditional Chinese medicine are always planted in the mountainous area where the natural environment is suitable. As the mountain terrain is complex and the distribution of planting plots is scattered, the traditional survey method is difficult to obtain accurate planting area. It is of great significance to provide decision support for the conservation and utilization of traditional Chinese medicine resources by studying the method of extraction of Chinese herbal medicine planting area based on remote sensing and realizing the dynamic monitoring and reserve estimation of Chinese herbal medicines. In this paper, taking the Panax notoginseng plots in Wenshan prefecture of Yunnan province as an example, the China-made GF-1multispectral remote sensing images with a 16 m×16 m resolution were obtained. Then, the time series that can reflect the difference of spectrum of P. notoginseng shed and the background objects were selected to the maximum extent, and the decision tree model of extraction the of P. notoginseng plots was constructed according to the spectral characteristics of the surface features. The results showed that the remote sensing classification method based on the decision tree model could extract P. notoginseng plots in the study area effectively. The method can provide technical support for extraction of P. notoginseng plots at county level. Copyright© by the Chinese Pharmaceutical Association.

Spatial Field Variability Mapping of Rice Crop using Clustering Technique from Space Borne Hyperspectral Data

NASA Astrophysics Data System (ADS)

Moharana, S.; Dutta, S.

2015-12-01

Precision farming refers to field-specific management of an agricultural crop at a spatial scale with an aim to get the highest achievable yield and to achieve this spatial information on field variability is essential. The difficulty in mapping of spatial variability occurring within an agriculture field can be revealed by employing spectral techniques in hyperspectral imagery rather than multispectral imagery. However an advanced algorithm needs to be developed to fully make use of the rich information content in hyperspectral data. In the present study, potential of hyperspectral data acquired from space platform was examined to map the field variation of paddy crop and its species discrimination. This high dimensional data comprising 242 spectral narrow bands with 30m ground resolution Hyperion L1R product acquired for Assam, India (30th Sept and 3rd Oct, 2014) were allowed for necessary pre-processing steps followed by geometric correction using Hyperion L1GST product. Finally an atmospherically corrected and spatially deduced image consisting of 112 band was obtained. By employing an advanced clustering algorithm, 12 different clusters of spectral waveforms of the crop were generated from six paddy fields for each images. The findings showed that, some clusters were well discriminated representing specific rice genotypes and some clusters were mixed treating as a single rice genotype. As vegetation index (VI) is the best indicator of vegetation mapping, three ratio based VI maps were also generated and unsupervised classification was performed for it. The so obtained 12 clusters of paddy crop were mapped spatially to the derived VI maps. From these findings, the existence of heterogeneity was clearly captured in one of the 6 rice plots (rice plot no. 1) while heterogeneity was observed in rest of the 5 rice plots. The degree of heterogeneous was found more in rice plot no.6 as compared to other plots. Subsequently, spatial variability of paddy field was observed in different plot levels in the paddy fields from the two images. However, no such significant variation in rice genotypes at growth level was observed. Hence, the spectral information acquired from space platform can be linearly scaled to map the variation in field levels of rice crop which will be act as an informative system for rice agriculture practice.

Kinematic analysis of hip and knee rotation and other contributors to ballet turnout.

PubMed

Quanbeck, Amy E; Russell, Jeffrey A; Handley, Sara C; Quanbeck, Deborah S

2017-02-01

Turnout, or external rotation (ER) of the lower extremities, is essential in ballet. The purpose of this study was to utilise physical examination and a biomechanical method for obtaining functional kinematic data using hip and knee joint centres to identify the relative turnout contributions from hip rotation, femoral anteversion, knee rotation, tibial torsion, and other sources. Ten female dancers received a lower extremity alignment assessment, including passive hip rotation, femoral anteversion, tibial torsion, weightbearing foot alignment, and Beighton hypermobility score. Next, turnout was assessed using plantar pressure plots and three-dimensional motion analysis; participants performed turnout to ballet first position on both a plantar pressure mat and friction-reducing discs. A retro-reflective functional marker motion capture system mapped the lower extremities and hip and knee joint centres. Mean total turnout was 129±15.7° via plantar pressure plots and 135±17.8° via kinematics. Bilateral hip ER during turnout was 49±10.2° (36% of total turnout). Bilateral knee ER during turnout was 41±5.9° (32% of total turnout). Hip ER contribution to total turnout measured kinematically was less than expected compared to other studies, where hip ER was determined without functional kinematic data. Knee ER contributed substantially more turnout than expected or previously reported. This analysis method allows precise assessment of turnout contributors.

Disturbance severity and net primary production resilience of a Great Lakes forest ecosystem

NASA Astrophysics Data System (ADS)

Goodrich-Stuart, E. J.; Fahey, R.; De La Cruz, A.; Gough, C. M.

2013-12-01

As many Eastern deciduous forests of North America transition from early to mid-succession, the future of regional terrestrial carbon (C) storage is uncertain. The gradual, patchy senescence of early-successional trees accompanying this transition is comparable in severity to moderate disturbances such as silvicultural thinnings or insect outbreaks. While stand-replacing disturbance causes forests to temporarily become C sources, more moderate disturbances may inflict little to no decline in C sequestration. Identifying the disturbance severity at which net primary production (NPP) declines and the underlying mechanisms that drive forest C storage resistance to disturbance is increasingly important as moderate disturbances increase in frequency and extent across the region. The Forest Accelerated Succession ExperimenT (FASET) at the University of Michigan Biological Station subjected 39 ha of forest to moderate disturbance in 2008 by advancing age-related tree mortality through the stem girdling of early successional aspen and birch. Stand-scale disturbance severity, expressed as relative basal area of girdled aspen and birch, was 39% but plot-scale severity varied substantially within the experimental area (9 to 66% in 0.1 ha plots) because of the heterogeneous distribution of aspen and birch. We used this disturbance severity gradient to examine: 1) the relationship between NPP resilience and disturbance severity; 2) the disturbance severity at which NPP resilience prompts a shift in dominance from canopy to subcanopy vegetation; 3) how NPP resilience relates to disturbance-driven changes in resource-use efficiency, and 4) how disturbance severity shapes emerging forest communities We found that NPP is highly resilient to low to moderate levels of disturbance, but that production declines once a higher disturbance threshold is exceeded. Several complementary mechanisms, including canopy structural reorganization and the reallocation of growth-limiting light and nitrogen resources, appear to maintain NPP up to the disturbance severity threshold. Our results suggest that both canopy and subcanopy trees reacted rapidly to compensate for canopy tree mortality, but at higher disturbance severities, subcanopy trees provided an important buffer in support of NPP resilience. Our data also suggests a larger increase in the growth rate of red maples (Acer rubrum) following disturbance than subcanopy red oak (Quercus rubra) and white pine (Pinus strobus), as well as a greater contribution to overall plot-level production in more severely disturbed plots. These findings demonstrate that some forests can tolerate substantial disturbance without a reduction in NPP, suggesting that the relationship between disturbance severity and declining production may be non-linear. This result has important implications for the region's C cycle, suggesting that moderate disturbances may not cause a decline in forest C sequestration but may actually stimulate new growth to maintain NPP.

Design of a factorial experiment with randomization restrictions to assess medical device performance on vascular tissue

PubMed Central

2011-01-01

Background Energy-based surgical scalpels are designed to efficiently transect and seal blood vessels using thermal energy to promote protein denaturation and coagulation. Assessment and design improvement of ultrasonic scalpel performance relies on both in vivo and ex vivo testing. The objective of this work was to design and implement a robust, experimental test matrix with randomization restrictions and predictive statistical power, which allowed for identification of those experimental variables that may affect the quality of the seal obtained ex vivo. Methods The design of the experiment included three factors: temperature (two levels); the type of solution used to perfuse the artery during transection (three types); and artery type (two types) resulting in a total of twelve possible treatment combinations. Burst pressures of porcine carotid and renal arteries sealed ex vivo were assigned as the response variable. Results The experimental test matrix was designed and carried out as a split-plot experiment in order to assess the contributions of several variables and their interactions while accounting for randomization restrictions present in the experimental setup. The statistical software package SAS was utilized and PROC MIXED was used to account for the randomization restrictions in the split-plot design. The combination of temperature, solution, and vessel type had a statistically significant impact on seal quality. Conclusions The design and implementation of a split-plot experimental test-matrix provided a mechanism for addressing the existing technical randomization restrictions of ex vivo ultrasonic scalpel performance testing, while preserving the ability to examine the potential effects of independent factors or variables. This method for generating the experimental design and the statistical analyses of the resulting data are adaptable to a wide variety of experimental problems involving large-scale tissue-based studies of medical or experimental device efficacy and performance. PMID:21599963

Nutrient loss with runoff from fairway turf: an evaluation of core cultivation practices and their environmental impact.

PubMed

Rice, Pamela J; Horgan, Brian P

2011-11-01

The presence of excess nutrients in surface waters can result in undesirable environmental and economic consequences, including nuisance algal blooms and eutrophication. Fertilizer use in highly managed turf systems has raised questions concerning the contribution of nutrients to surrounding surface waters. Experiments were designed to quantify phosphorus and nitrogen transport with runoff from turf plots maintained as a golf course fairway to identify which cultural practice, solid tine (ST) or hollow tine (HT) core cultivation, maximized phosphorus and nitrogen retention at the site of fertilizer application. Simulated precipitation and collection of resulting runoff were completed 26 ± 13 h following granular fertilizer application (18-3-18: N-P₂O₅-K₂O) and 63 d and 2 d following core cultivation. Runoff volumes were reduced in fairway turf plots aerated with HT relative to ST (63 d: 10%, 2 d: 55% reduction). Analysis of the runoff revealed a reduction in soluble phosphorus, ammonium nitrogen, and nitrate nitrogen losses with runoff from plots managed with HT; a 5 to 27% reduction after 63 d; and a 39 to 77% reduction at 2 d. Golf course runoff-to-surface water scenarios were used to calculate estimated environmental concentrations (EECs) of nitrogen and phosphorus in surface water receiving runoff from turf managed with ST or HT core cultivation. Surface water concentrations of phosphorus remained above the U.S. Environmental Protection Agency's water quality criteria to limit eutrophication, with the exception of concentrations associated with HT core cultivation at 2 d. Regardless of management practice (ST or HT) and time between core cultivation and runoff (63 d or 2 d), all EECs of nitrogen were below levels associated with increased algal growth. Understanding nutrient transport with runoff and identifying strategies that reduce off-site transport will increase their effectiveness at intended sites of application and minimize undesirable effects to surrounding surface water resources. Copyright © 2011 SETAC.

The Effects of Different Tillage Systems on Soil Hydrology and Erosion in Southeastern Brazil

NASA Astrophysics Data System (ADS)

Bertolino, A. V. F. A.; Fernandes, N. F.; Souza, A. P.; Miranda, J. P.; Rocha, M. L.

2009-04-01

Conventional tillage usually imposes a variety of modifications on soil properties that can lead to important changes in the type and magnitude of the hydrological processes that take place at the upper portion of the soil profile. Plough pan formation, for example, is considered to be an important consequence of conventional tillage practices in southeastern Brazil, decreasing infiltration rates and contributing to soil erosion, especially in steep slopes. In order to characterize the changes in soil properties and soil hydrology due to the plough pan formation we carried out detailed investigations in two experimental plots in Paty do Alferes region, located in the hilly landscape of Serra do Mar in southeastern Brazil, close to Rio de Janeiro city. Farming activities are very important in this area, in particular the ones related to the tomato production. The local hilly topography with short and steep hillslopes, as well as an average annual rainfall of almost 2000 mm, favor surface runoff and the evolution of rill and gully erosion. The two runoff plots are 22m long by 4m wide and were installed side by side along a representative hillslope, both in terms of soil (Oxisol) and steepness. At the lower portion of each plot there is a collecting trough connected by a PVC pipe to a 500 and 1000 liters sediment storage boxes. Soil tillage treatments used in the two plots were: Conventional Tillage (CT), with one plowing using disc-type plow (about 18 cm depth) and one downhill tractor leveling, in addition to burning residues from previous planting; and Minimum Tillage (MT), which did not allow burning residues from previous planting and preserved a vegetative cover between plantation lines. Runoff and soil erosion measurements were carried out in both plots immediately after each rainfall event. In order to characterize soil water movements under the two tillage systems (CT and MT), 06 nests of tensiometers and 04 nests of Watermark sensors were installed in each plot. Based on previous studies in this area, suggesting that the plough pan develop at about 20cm depth, the soil water potential (SWP) sensors were installed, in each nest, at 15, 30 and 80 cm depths. Continuously readings in the 30 SWP sensors were made both at a daily and event basis (during some rainfall events) for 25 months. Rainfall was continuously measured in the area by an automatic rain-gauge (tipping bucket) installed close to the plots. In order to characterize changes is soil porosity, both total pore space and pore inter-connections, undisturbed soil blocks were collected for micromorphological analyses (0-10cm, 12-22cm and 25-35cm depths) at small trenches located at the upper parts of each plot. The results attested that soil under CT developed a plough pan layer at about 20 cm depth, showing a 44% decrease in total pore space from 0-10cm to 12-22cm depths, with a predominant network of isolated pores. In the MT plot, soil porosity is more homogeneous with depth, with a predominant network of larger and better connected pores. The results related to soil hydrology show that in many moments, both CT and MT, stay very close to saturation, both at 15 and 30 cm depth. Above the plough pan under CT, soils tend to saturate faster and to have a slower drainage rate than the ones under MT. Detailed SWP analyses made during rain events suggest that CT may favors lateral flows while soils under MT are draining. Soil erosion rates measured for individual events at CT are about four times greater than the ones observed at MT. The results observed in this study attest that conventional tillage (CT) in this area imposed important changes in soil structure, pore-size distribution and connectivity, as well as in soil infiltration, drainage and erosion.

Large-scale carbon stock assessment of woody vegetation in tropical dry deciduous forest of Sathanur reserve forest, Eastern Ghats, India.

PubMed

Gandhi, Durai Sanjay; Sundarapandian, Somaiah

2017-04-01

Tropical dry forests are one of the most widely distributed ecosystems in tropics, which remain neglected in research, especially in the Eastern Ghats. Therefore, the present study was aimed to quantify the carbon storage in woody vegetation (trees and lianas) on large scale (30, 1 ha plots) in the dry deciduous forest of Sathanur reserve forest of Eastern Ghats. Biomass of adult (≥10 cm DBH) trees was estimated by species-specific allometric equations using diameter and wood density of species whereas in juvenile tree population and lianas, their respective general allometric equations were used to estimate the biomass. The fractional value 0.4453 was used to convert dry biomass into carbon in woody vegetation of tropical dry forest. The mean aboveground biomass value of juvenile tree population was 1.86 Mg/ha. The aboveground biomass of adult trees ranged from 64.81 to 624.96 Mg/ha with a mean of 245.90 Mg/ha. The mean aboveground biomass value of lianas was 7.98 Mg/ha. The total biomass of woody vegetation (adult trees + juvenile population of trees + lianas) ranged from 85.02 to 723.46 Mg/ha, with a mean value of 295.04 Mg/ha. Total carbon accumulated in woody vegetation in tropical dry deciduous forest ranged from 37.86 to 322.16 Mg/ha with a mean value of 131.38 Mg/ha. Adult trees accumulated 94.81% of woody biomass carbon followed by lianas (3.99%) and juvenile population of trees (1.20%). Albizia amara has the greatest biomass and carbon stock (58.31%) among trees except for two plots (24 and 25) where Chloroxylon swietenia contributed more to biomass and carbon stock. Similarly, Albizia amara (52.4%) showed greater carbon storage in juvenile population of trees followed by Chloroxylon swietenia (21.9%). Pterolobium hexapetalum (38.86%) showed a greater accumulation of carbon in liana species followed by Combretum albidum (33.04%). Even though, all the study plots are located within 10 km radius, they show a significant spatial variation among them in terms of biomass and carbon stocks which could be attributed to variation in anthropogenic pressures among the plots as well as to changes in tree density across landscapes. Total basal area of woody vegetation showed a significant positive (R 2  = 0.978; P = 0.000) relationship with carbon storage while juvenile tree basal area showed the negative relationship (R 2  = 0.4804; P = 0.000) with woody carbon storage. The present study generates a large-scale baseline data of dry deciduous forest carbon stock, which would facilitate carbon stock assessment at a national level as well as to understand its contribution on a global scale.

Second chronological supplement to the Carcinogenic Potency Database: standardized results of animal bioassays published through December 1984 and by the National Toxicology Program through May 1986.

PubMed Central

Gold, L S; Slone, T H; Backman, G M; Magaw, R; Da Costa, M; Lopipero, P; Blumenthal, M; Ames, B N

1987-01-01

This paper is the second chronological supplement to the Carcinogenic Potency Database, published earlier in this journal (1,2,4). We report here results of carcinogenesis bioassays published in the general literature between January 1983 and December 1984, and in Technical Reports of the National Cancer Institute/National Toxicology Program between January 1983 and May 1986. This supplement includes results of 525 long-term, chronic experiments of 199 test compounds, and reports the same information about each experiment in the same plot format as the earlier papers: e.g., the species and strain of test animal, the route and duration of compound administration, dose level and other aspects of experimental protocol, histopathology and tumor incidence, TD50 (carcinogenic potency) and its statistical significance, dose response, author's opinion about carcinogenicity, and literature citation. We refer the reader to the 1984 publications for a description of the numerical index of carcinogenic potency (TD50), a guide to the plot of the database, and a discussion of the sources of data, the rationale for the inclusion of particular experiments and particular target sites, and the conventions adopted in summarizing the literature. The three plots of the database are to be used together, since results of experiments published in earlier plots are not repeated. Taken together, the three plots include results for more than 3500 experiments on 975 chemicals. Appendix 14 is an index to all chemicals in the database and indicates which plot(s) each chemical appears in. PMID:3691431

Hydrodynamic measurements in Suisun Bay, California, 1992-93

USGS Publications Warehouse

Gartner, Jeffrey W.; Burau, Jon R.

1999-01-01

Sea level, velocity, temperature, and salinity (conductivity and temperature) data collected in Suisun Bay, California, from December 11, 1992, through May 31, 1993, by the U.S. Geological Survey are documented in this report. Sea-level data were collected at four locations and temperature and salinity data were collected at seven locations. Velocity data were collected at three locations using acoustic Doppler current profilers and at four other locations using point velocity meters. Sea-level and velocity data are presented in three forms (1) harmonic analysis results, (2) time-series plots (sea level, current speed, and current direction versus time), and (3) time-series plots of the low-pass filtered data. Temperature and salinity data are presented as plots of raw and low-pass filtered time series. The velocity and salinity data collected during this study document a period when the residual current patterns and salt field were significantly altered by large Delta outflow (three peaks in excess of 2,000 cubic meters per second). Residual current profiles were consistently seaward with magnitudes that fluctuated primarily in concert with Delta outflow and secondarily with the spring-neap tide cycle. The freshwater inputs advected salinity seaward of Suisun Bay for most of this study. Except for a 10-day period at the beginning of the study, dynamically significant salinities (>2) were seaward of Suisun Bay, which resulted in little or no gravitational circulation transport.

The impact of forest structure and spatial scale on the relationship between ground plot above ground biomass and GEDI lidar waveforms

NASA Astrophysics Data System (ADS)

Armston, J.; Marselis, S.; Hancock, S.; Duncanson, L.; Tang, H.; Kellner, J. R.; Calders, K.; Disney, M.; Dubayah, R.

2017-12-01

The NASA Global Ecosystem Dynamics Investigation (GEDI) will place a multi-beam waveform lidar instrument on the International Space Station (ISS) to provide measurements of forest vertical structure globally. These measurements of structure will underpin empirical modelling of above ground biomass density (AGBD) at the scale of individual GEDI lidar footprints (25m diameter). The GEDI pre-launch calibration strategy for footprint level models relies on linking AGBD estimates from ground plots with GEDI lidar waveforms simulated from coincident discrete return airborne laser scanning data. Currently available ground plot data have variable and often large uncertainty at the spatial resolution of GEDI footprints due to poor colocation, allometric model error, sample size and plot edge effects. The relative importance of these sources of uncertainty partly depends on the quality of ground measurements and region. It is usually difficult to know the magnitude of these uncertainties a priori so a common approach to mitigate their influence on model training is to aggregate ground plot and waveform lidar data to a coarser spatial scale (0.25-1ha). Here we examine the impacts of these principal sources of uncertainty using a 3D simulation approach. Sets of realistic tree models generated from terrestrial laser scanning (TLS) data or parametric modelling matched to tree inventory data were assembled from four contrasting forest plots across tropical rainforest, deciduous temperate forest, and sclerophyll eucalypt woodland sites. These tree models were used to simulate geometrically explicit 3D scenes with variable tree density, size class and spatial distribution. GEDI lidar waveforms are simulated over ground plots within these scenes using monte carlo ray tracing, allowing the impact of varying ground plot and waveform colocation error, forest structure and edge effects on the relationship between ground plot AGBD and GEDI lidar waveforms to be directly assessed. We quantify the sensitivity of calibration equations relating GEDI lidar structure measurements and AGBD to these factors at a range of spatial scales (0.0625-1ha) and discuss the implications for the expanding use of existing in situ ground plot data by GEDI.

Reptile and amphibian responses to large-scale wildfires in southern California

USGS Publications Warehouse

Rochester, C.J.; Brehme, C.S.; Clark, D.R.; Stokes, D.C.; Hathaway, S.A.; Fisher, R.N.

2010-01-01

In 2003, southern California experienced several large fires that burned thousands of hectares of wildlife habitats and conserved lands. To investigate the effects of these fires on the reptile and amphibian communities, we compared the results from prefire herpetofauna and vegetation sampling to two years of postfire sampling across 38 burned and 17 unburned plots. The sampling plots were spread over four vegetation types and four open space areas within San Diego County. Our capture results indicated that burned chaparral and coastal sage scrub plots lost herpetofaunal species diversity after the fires and displayed a significant shift in overall community structure. Shrub and tree cover at the burned plots, averaged across the second and third postfire years, had decreased by 53 in chaparral and 75 in coastal sage scrub. Additionally, postfire herpetofauna community structure at burned plots was more similar to that found in unburned grasslands. In grassland and woodland/riparian vegetation plots, where shrub and tree cover was not significantly affected by fires, we found no differences in the herpetofaunal species diversity or community composition. At the individual species level, Sceloporus occidentalis was the most abundant reptile in these areas both before and after the fires. We saw increases in the net capture rates for several lizard species, including Aspidoscelis tigris, Phrynosoma coronatum, and Uta stansburiana in burned chaparral plots and Aspidoscelis hyperythra and U. stansburiana in burned coastal sage scrub plots. The toad, Bufo boreas, was detected at significantly fewer burned plots in chaparral after the fires. Additionally, we documented decreases in the number of plots occupied by lizards (Elgaria multicarinata), salamanders (Batrachoseps major), and snakes (Coluber constrictor, Lampropeltis getula, Pituophis catenifer, and Masticophis lateralis) in coastal sage scrub and chaparral after the fires. We discuss the individual species results as they relate to such life-history traits as the susceptibility to initial mortality, the response to the altered postfire habitat, and shifts in the availability of potential prey. We foresee that a continued unnatural fire regime will result in a simplification of the southern California reptile and amphibian communities. ?? 2010 Society for the Study of Amphibians and Reptiles.

The Readability Graph Validated at Primary Levels.

ERIC Educational Resources Information Center

Fry, Edward B.

The validity of Fry's Readability Graph for determining grade level readability scores was compared with the Spache Formula, the cloze technique, and oral reading in the case of seven primary-level books. Descriptions of these four indicated that to determine grade level, Fry's Readability Graph plots the total number of syllables with the total…

Nitrogen transformations following tropical forest felling and burning on a volcanic soil

NASA Technical Reports Server (NTRS)

Matson, Pamela A.; Vitousek, Peter M.; Ewel, John J.; Mazzarino, Maria Julia; Robertson, G. Philip

1987-01-01

Nitrogen transformations and loss were measured following forest clearing in a relatively fertile tropical forest site. Nitrogen mineralization, nitrification, and amounts of ammonium and nitrate increased substantially in surface soils during the 6 mo following burning, then returned to background levels. The nitrogen content of microbial biomass declined to half its original value 6 mo after clearing and remained low in the cleared sites. Plant uptake of nitrogen was substantial on cleared plots (50 g/sq m), but it accounted for only 18 percent of N-15 label added to field plots. MIcrobial immobilization of N-15 was small relative to that in a cleared temperate site, and measurements of denitrification potentials suggested that relatively little mineralized nitrogen was lost to the atmosphere. Substantial amounts of nitrogen (40-70 g/sq m) were retained as exchangeably bound nitrate deep in the soils of a cleared plot on which revegetation was prevented; this process accounted for 12 percent of the N-15 label added to field plots.

Effect of culture and density on aboveground biomass allocation of 12 years old loblolly pine trees in the upper coastal plain and piedmont of Georgia and Alabama

Treesearch

Santosh Subedi; Dr. Michael Kane; Dr. Dehai Zhao; Dr. Bruce Borders; Dr. Dale Greene

2012-01-01

We destructively sampled a total of 192 12-year-old loblolly pine trees from four installations established by the Plantation Management Research Cooperative (PMRC) to analyze the effects of planting density and cultural intensity on tree level biomass allocation in the Piedmont and Upper Coastal Plain of Georgia and Alabama. Each installation had 12 plots, each plot...

Stand and individual tree growth of mature red oak after crop tree management in southern New England: 5-year results

Treesearch

Jeffrey S. Ward

2011-01-01

In winter 2003-04, four oak management study areas were established in Connecticut. Each study area had three 0.62-acre treatment plots: B-level thinning, crop tree, and unmanaged. Each plot was located within a 3- to 5-acre area with similar treatment. The mature red oak sawtimber stands had no prior management and were 80 to 112 years old; upper canopy oaks averaged...

A general method for assessing the effects of uncertainty in individual-tree volume model predictions on large-area volume estimates with a subtropical forest illustration

Treesearch

Ronald E. McRoberts; Paolo Moser; Laio Zimermann Oliveira; Alexander C. Vibrans

2015-01-01

Forest inventory estimates of tree volume for large areas are typically calculated by adding the model predictions of volumes for individual trees at the plot level, calculating the mean over plots, and expressing the result on a per unit area basis. The uncertainty in the model predictions is generally ignored, with the result that the precision of the large-area...

Statistical Strategy for Inventorying and Monitoring the Ecosystem Resources of the State of Jalisco at Multiple Scales and Resolution Levels

Treesearch

Robin M. Reich; Hans T. Schreuder

2006-01-01

The sampling strategy involving both statistical and in-place inventory information is presented for the natural resources project of the Green Belt area (Centuron Verde) in the Mexican state of Jalisco. The sampling designs used were a grid based ground sample of a 90x90 m plot and a two-stage stratified sample of 30 x 30 m plots. The data collected were used to...

Preimpoundment Water Quality of the Wild Rice River, Norman County, Minnesota.

DTIC Science & Technology

1980-06-01

cell counts at Twin Valley for 1977 water year 25 14. Plot of total phosphorus related to phytoplankton cell counts at Twin Valley ; 30 15. Plot...of total nitrogen related to phytoplankton cell counts at Twin Valley 31 16. Bar graph of diversity indices of phytoplankton genera, 1976, 1977...statistically signifi- cant beyond the 0.02 level. There is no apparent relation of BOD to stream- flow or to suspended-sediment, phytoplankton , and bacteria

Noninvasive bi-graphical analysis for the quantification of slowly reversible radioligand binding

NASA Astrophysics Data System (ADS)

Seo, Seongho; Kim, Su Jin; Yoo, Hye Bin; Lee, Jee-Young; Kyeong Kim, Yu; Lee, Dong Soo; Zhou, Yun; Lee, Jae Sung

2016-09-01

In this paper, we presented a novel reference-region-based (noninvasive) bi-graphical analysis for the quantification of a reversible radiotracer binding that may be too slow to reach relative equilibrium (RE) state during positron emission tomography (PET) scans. The proposed method indirectly implements the noninvasive Logan plot, through arithmetic combination of the parameters of two other noninvasive methods and the apparent tissue-to-plasma efflux rate constant for the reference region (k2\\prime ). We investigated its validity and statistical properties, by performing a simulation study with various noise levels and k2\\prime values, and also evaluated its feasibility for [18F]FP-CIT PET in human brain. The results revealed that the proposed approach provides distribution volume ratio estimation comparable to the Logan plot at low noise levels while improving underestimation caused by non-RE state differently depending on k2\\prime . Furthermore, the proposed method was able to avoid noise-induced bias of the Logan plot, and the variability of its results was less dependent on k2\\prime than the Logan plot. Therefore, this approach, without issues related to arterial blood sampling given a pre-estimate of k2\\prime (e.g. population-based), could be useful in parametric image generation for slow kinetic tracers staying in a non-RE state within a PET scan.

Effects of chronic exposure in populations of Koeleria gracilis Pers. from the Semipalatinsk nuclear test site, Kazakhstan.

PubMed

Geras'kin, S A; Oudalova, A A; Dikarev, V G; Dikareva, N S; Mozolin, E M; Hinton, T; Spiridonov, S I; Copplestone, D; Garnier-Laplace, J

2012-02-01

Morphological and cytogenetic abnormalities were examined in crested hairgrass (Koeleria gracilis Pers.) populations inhabiting the Semipalatinsk nuclear test site (STS), Kazakhstan. Sampling of biological material and soil was carried out during 3 years (2005-2007) at 4 sites within the STS. Activity concentrations of 10 radionuclides and 8 heavy metals content in soils were measured. Doses absorbed by plants were estimated and varied, depending on the plot, from 4 up to 265 mGy/y. The frequency of cytogenetic alterations in apical meristem of germinated seeds from the highly contaminated plot significantly exceeded the level observed at other plots with lower levels of radioactive contamination during all three years of the study. A significant excess of chromosome aberrations, typical for radiation exposure, as well as a dependence of the frequency of these types of mutations on dose absorbed by plants were revealed. The results indicate the role radioactive contamination plays in the occurrence of cytogenetic effects. However, no radiation-dependent morphological alterations were detected in the progeny of the exposed populations. Given that the crested hairgrass populations have occupied the radioactively contaminated plots for some 50 years, adaptation to the radiation stress was not evident. The findings obtained were in agreement with the benchmark values proposed in the FASSET and ERICA projects to restrict radiation impacts on biota. Copyright © 2011 Elsevier Ltd. All rights reserved.

LEGO plot for simultaneous application of multiple quality requirements during trueness verification of quantitative laboratory tests.

PubMed

Park, Hae-il; Chae, Hyojin; Kim, Myungshin; Lee, Jehoon; Kim, Yonggoo

2014-03-01

We developed a two-dimensional plot for viewing trueness that takes into account potential shift and variable quality requirements to verify trueness using certified reference material (CRM). Glucose, total cholesterol (TC), and creatinine levels were determined by two kinds of assay in two levels of a CRM. Available quality requirements were collected, codified, and sorted in an ascending order in the plot's header row. Centering on the mean of measured values from CRM, the "mean ± US CLIA '88 allowable total error" was located in the header of the leftmost and rightmost columns. Twenty points were created in intervening columns as potential shifts. Uncertainties were calculated according to regression between certified values and uncertainties of CRM, and positioned in the corresponding columns. Cells were assigned different colors where column and row intersected based on comparison of the 95% confidence interval of the percentage bias with each quality requirement. A glucose assay failed to meet the highest quality criteria, for which shift of +0.13-0.14 mmol/l was required. A TC assay met the quality requirement and a shift of ±0.03 mmol/l was tolerable. A creatinine assay also met the quality requirement but any shift was not tolerable. The plot provides a systematic view of the trueness of quantitative laboratory tests. © 2014 Wiley Periodicals, Inc.

Native trees show conservative water use relative to invasive trees: results from a removal experiment in a Hawaiian wet forest.

PubMed

Cavaleri, Molly A; Ostertag, Rebecca; Cordell, Susan; Sack, Lawren

2014-01-01

While the supply of freshwater is expected to decline in many regions in the coming decades, invasive plant species, often 'high water spenders', are greatly expanding their ranges worldwide. In this study, we quantified the ecohydrological differences between native and invasive trees and also the effects of woody invasive removal on plot-level water use in a heavily invaded mono-dominant lowland wet tropical forest on the Island of Hawaii. We measured transpiration rates of co-occurring native and invasive tree species with and without woody invasive removal treatments. Twenty native Metrosideros polymorpha and 10 trees each of three invasive species, Cecropia obtusifolia, Macaranga mappa and Melastoma septemnervium, were instrumented with heat-dissipation sap-flux probes in four 100 m(2) plots (two invaded, two removal) for 10 months. In the invaded plots, where both natives and invasives were present, Metrosideros had the lowest sap-flow rates per unit sapwood, but the highest sap-flow rates per whole tree, owing to its larger mean diameter than the invasive trees. Stand-level water use within the removal plots was half that of the invaded plots, even though the removal of invasives caused a small but significant increase in compensatory water use by the remaining native trees. By investigating the effects of invasive species on ecohydrology and comparing native vs. invasive physiological traits, we not only gain understanding about the functioning of invasive species, but we also highlight potential water-conservation strategies for heavily invaded mono-dominant tropical forests worldwide. Native-dominated forests free of invasive species can be conservative in overall water use, providing a strong rationale for the control of invasive species and preservation of native-dominated stands.

Native trees show conservative water use relative to invasive trees: results from a removal experiment in a Hawaiian wet forest

PubMed Central

Cavaleri, Molly A.; Ostertag, Rebecca; Cordell, Susan; Sack, Lawren

2014-01-01

While the supply of freshwater is expected to decline in many regions in the coming decades, invasive plant species, often ‘high water spenders’, are greatly expanding their ranges worldwide. In this study, we quantified the ecohydrological differences between native and invasive trees and also the effects of woody invasive removal on plot-level water use in a heavily invaded mono-dominant lowland wet tropical forest on the Island of Hawaii. We measured transpiration rates of co-occurring native and invasive tree species with and without woody invasive removal treatments. Twenty native Metrosideros polymorpha and 10 trees each of three invasive species, Cecropia obtusifolia, Macaranga mappa and Melastoma septemnervium, were instrumented with heat-dissipation sap-flux probes in four 100 m2 plots (two invaded, two removal) for 10 months. In the invaded plots, where both natives and invasives were present, Metrosideros had the lowest sap-flow rates per unit sapwood, but the highest sap-flow rates per whole tree, owing to its larger mean diameter than the invasive trees. Stand-level water use within the removal plots was half that of the invaded plots, even though the removal of invasives caused a small but significant increase in compensatory water use by the remaining native trees. By investigating the effects of invasive species on ecohydrology and comparing native vs. invasive physiological traits, we not only gain understanding about the functioning of invasive species, but we also highlight potential water-conservation strategies for heavily invaded mono-dominant tropical forests worldwide. Native-dominated forests free of invasive species can be conservative in overall water use, providing a strong rationale for the control of invasive species and preservation of native-dominated stands. PMID:27293637

Redox biotransformation and delivery of anthracycline anticancer antibiotics: How interpretable structure-activity relationships of lethality using electrophilicity and the London formula for dispersion interaction work.

PubMed

Pang, Siu-Kwong

2017-03-30

Quantum chemical methods and molecular mechanics approaches face a lot of challenges in drug metabolism study because of their either insufficient accuracy or huge computational cost, or lack of clear molecular level pictures for building computational models. Low-cost QSAR methods can often be carried out even though molecular level pictures are not well defined; however, they show difficulty in identifying the mechanisms of drug metabolism and delineating the effects of chemical structures on drug toxicity because a certain amount of molecular descriptors are difficult to be interpreted. In order to make a breakthrough, it was proposed that mechanistically interpretable molecular descriptors were used to correlate with biological activity to establish structure-activity plots. The mechanistically interpretable molecular descriptors used in this study include electrophilicity and the mathematical function in the London formula for dispersion interaction, and they were calculated using quantum chemical methods. The biological activity is the lethality of anthracycline anticancer antibiotics denoted as log LD50, which were obtained by intraperitoneal injection into mice. The results reveal that the plots for electrophilicity, which can be interpreted as redox reactivity of anthracyclines, can describe oxidative degradation for detoxification and reductive bioactivation for toxicity induction. The plots for the dispersion interaction function, which represent the attraction between anthracyclines and biomolecules, can describe efflux from and influx into target cells of toxicity. The plots can also identify three structural scaffolds of anthracyclines that have different metabolic pathways, resulting in their different toxicity behavior. This structure-dependent toxicity behavior revealed in the plots can provide perspectives on design of anthracycline anticancer antibiotics. Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.org.

On the rebound: soil organic carbon stocks can bounce back to near forest levels when agroforests replace agriculture in southern India

NASA Astrophysics Data System (ADS)

Hombegowda, H. C.; van Straaten, O.; Köhler, M.; Hölscher, D.

2015-08-01

Tropical agroforestry has an enormous potential to sequester carbon while simultaneously producing agricultural yields and tree products. The amount of soil organic carbon (SOC) sequestered is however influenced by the type of the agroforestry system established, the soil and climatic conditions and management. In this regional scale study, we utilized a chronosequence approach to investigate how SOC stocks changed when the original forests are converted to agriculture, and then subsequently to four different agroforestry systems (AFSs): homegarden, coffee, coconut and mango. In total we established 224 plots in 56 plot clusters across four climate zones in southern India. Each plot cluster consisted of four plots: a natural forest reference plot, an agriculture reference and two of the same AFS types of two ages (30-60 years and > 60 years). The conversion of forest to agriculture resulted in a large loss the original SOC stock (50-61 %) in the top meter of soil depending on the climate zone. The establishment of homegarden and coffee AFSs on agriculture land caused SOC stocks to rebound to near forest levels, while in mango and coconut AFSs the SOC stock increased only slightly above the agriculture stock. The most important variable regulating SOC stocks and its changes was tree basal area, possibly indicative of organic matter inputs. Furthermore, climatic variables such as temperature and precipitation, and soil variables such as clay fraction and soil pH were likewise all important regulators of SOC and SOC stock changes. Lastly, we found a strong correlation between tree species diversity in homegarden and coffee AFSs and SOC stocks, highlighting possibilities to increase carbon stocks by proper tree species assemblies.

Effect of mungbean (Vigna radiate) living mulch on density and dry weight of weeds in corn (Zea mays) field.

PubMed

Moghadam, M Bakhtiari; Vazan, S; Darvishi, B; Golzardi, F; Farahani, M Esfini

2011-01-01

Living mulch is a suitable solution for weeds ecological management and is considered as an effective method in decreasing of weeds density and dry weight. In order to evaluate of mungbean living mulch effect on density and dry weight of weeds in corn field, an experiment was conducted as a split plot based on randomized complete block design with four blocks in Research Field of Department of Agronomy, Karaj Branch, Islamic Azad University in 2010. Main plots were time of mungbean suppression with 2,4-D herbicide in four levels (4, 6, 8 and 10 leaves stages of corn) and control without weeding and sub plots were densities of mungbean in three levels (50%, 100% and 150% more than optimum density). Density and dry weight of the weeds were measured in all plots with a quadrate (60 x 100 cm) in 10 days after tasseling. Totally, 9 species of weeds were identified in the field, which included 4 broad leave species that were existed in all plots. The results showed that the best time for suppression of mungbean is the 8 leaves stage of corn, which decreased density and dry weight of weeds, 53% and 51% in comparison with control, respectively. Increase of density of mungbean from 50% into 150% more than optimum density, decrease the density and dry weight of weeds, 27.5% and 22%, respectively. It is concluded that the best time and density for suppression mungbean was 8 leaves stage of corn, and 150% more than optimum density, which decreased density and dry weight of the weeds 69% and 63.5% in comparison with control, respectively.

Identification of major sources controlling groundwater chemistry from a hard rock terrain — A case study from Mettur taluk, Salem district, Tamil Nadu, India

NASA Astrophysics Data System (ADS)

Srinivasamoorthy, K.; Chidambaram, S.; Prasanna, M. V.; Vasanthavihar, M.; Peter, John; Anandhan, P.

2008-02-01

The study area Mettur forms an important industrial town situated NW of Salem district. The geology of the area is mainly composed of Archean crystalline metamorphic complexes. To identify the major process activated for controlling the groundwater chemistry an attempt has been made by collecting a total of 46 groundwater samples for two different seasons, viz., pre-monsoon and post-monsoon. The groundwater chemistry is dominated by silicate weathering and (Na + Mg) and (Cl + SO4) accounts of about 90% of cations and anions. The contribution of (Ca + Mg) and (Na + K) to total cations and HCO3 indicates the domination of silicate weathering as major sources for cations. The plot for Na to Cl indicates higher Cl in both seasons, derived from Anthropogenic (human) sources from fertilizer, road salt, human and animal waste, and industrial applications, minor representations of Na also indicates source from weathering of silicate-bearing minerals. The plot for Na/Cl to EC indicates Na released from silicate weathering process which is also supported by higher HCO3 values in both the seasons. Ion exchange process is also activated in the study area which is indicated by shifting to right in plot for Ca + Mg to SO4 + HCO3. The plot of Na-Cl to Ca + Mg-HCO3-SO4 confirms that Ca, Mg and Na concentrations in groundwater are derived from aquifer materials. Thermodynamic plot indicates that groundwater is in equilibrium with kaolinite, muscovite and chlorite minerals. Saturation index of silicate and carbonate minerals indicate oversaturation during pre-monsoon and undersaturation during post-monsoon, conforming dissolution and dilution process. In general, water chemistry is guided by complex weathering process, ion exchange along with influence of Cl ions from anthropogenic impact.

The Importance of Large-Diameter Trees to Forest Structural Heterogeneity

PubMed Central

Lutz, James A.; Larson, Andrew J.; Freund, James A.; Swanson, Mark E.; Bible, Kenneth J.

2013-01-01

Large-diameter trees dominate the structure, dynamics and function of many temperate and tropical forests. However, their attendant contributions to forest heterogeneity are rarely addressed. We established the Wind River Forest Dynamics Plot, a 25.6 ha permanent plot within which we tagged and mapped all 30,973 woody stems ≥1 cm dbh, all 1,966 snags ≥10 cm dbh, and all shrub patches ≥2 m2. Basal area of the 26 woody species was 62.18 m2/ha, of which 61.60 m2/ha was trees and 0.58 m2/ha was tall shrubs. Large-diameter trees (≥100 cm dbh) comprised 1.5% of stems, 31.8% of basal area, and 17.6% of the heterogeneity of basal area, with basal area dominated by Tsuga heterophylla and Pseudotsuga menziesii. Small-diameter subpopulations of Pseudotsuga menziesii, Tsuga heterophylla and Thuja plicata, as well as all tree species combined, exhibited significant aggregation relative to the null model of complete spatial randomness (CSR) up to 9 m (P≤0.001). Patterns of large-diameter trees were either not different from CSR (Tsuga heterophylla), or exhibited slight aggregation (Pseudotsuga menziesii and Thuja plicata). Significant spatial repulsion between large-diameter and small-diameter Tsuga heterophylla suggests that large-diameter Tsuga heterophylla function as organizers of tree demography over decadal timescales through competitive interactions. Comparison among two forest dynamics plots suggests that forest structural diversity responds to intermediate-scale environmental heterogeneity and disturbances, similar to hypotheses about patterns of species richness, and richness- ecosystem function. Large mapped plots with detailed within-plot environmental spatial covariates will be required to test these hypotheses. PMID:24376579

The importance of large-diameter trees to forest structural heterogeneity.

PubMed

Lutz, James A; Larson, Andrew J; Freund, James A; Swanson, Mark E; Bible, Kenneth J

2013-01-01

Large-diameter trees dominate the structure, dynamics and function of many temperate and tropical forests. However, their attendant contributions to forest heterogeneity are rarely addressed. We established the Wind River Forest Dynamics Plot, a 25.6 ha permanent plot within which we tagged and mapped all 30,973 woody stems ≥ 1 cm dbh, all 1,966 snags ≥ 10 cm dbh, and all shrub patches ≥ 2 m(2). Basal area of the 26 woody species was 62.18 m(2)/ha, of which 61.60 m(2)/ha was trees and 0.58 m(2)/ha was tall shrubs. Large-diameter trees (≥ 100 cm dbh) comprised 1.5% of stems, 31.8% of basal area, and 17.6% of the heterogeneity of basal area, with basal area dominated by Tsuga heterophylla and Pseudotsuga menziesii. Small-diameter subpopulations of Pseudotsuga menziesii, Tsuga heterophylla and Thuja plicata, as well as all tree species combined, exhibited significant aggregation relative to the null model of complete spatial randomness (CSR) up to 9 m (P ≤ 0.001). Patterns of large-diameter trees were either not different from CSR (Tsuga heterophylla), or exhibited slight aggregation (Pseudotsuga menziesii and Thuja plicata). Significant spatial repulsion between large-diameter and small-diameter Tsuga heterophylla suggests that large-diameter Tsuga heterophylla function as organizers of tree demography over decadal timescales through competitive interactions. Comparison among two forest dynamics plots suggests that forest structural diversity responds to intermediate-scale environmental heterogeneity and disturbances, similar to hypotheses about patterns of species richness, and richness- ecosystem function. Large mapped plots with detailed within-plot environmental spatial covariates will be required to test these hypotheses.

Evaluating productivity-biodiversity relationship and spectral diversity in prairie grasslands under different fire management treatments using in-situ and remote sensing hyperspectral data

NASA Astrophysics Data System (ADS)

Gholizadeh, H.; Gamon, J. A.; Zygielbaum, A. I.; Schweiger, A. K.; Cavender-Bares, J.; Yang, Y.; Knops, J. M. H.

2017-12-01

Grasslands cover as much as 25% of the Earth's surface and account for approximately 20% of overall terrestrial productivity and contribute to global biodiversity. To optimize the status of grasslands and to counteract their degradation, different management practices have been adopted. Fire has been shown to be an important management practice in the maintenance of grasslands. Our main goals were 1) to evaluate the productivity-biodiversity relationship in grasslands under fire treatment, and 2) to evaluate the capability of hyperspectral remote sensing in estimating biodiversity using spectral data (i.e. spectral diversity). We used above-ground biomass (as a surrogate for productivity), species richness (SR; as a surrogate for biodiversity), and airborne hyperspectral data from a natural grassland with fire treatment (20 plots), and a natural grassland without fire treatment (21 plots), all located at the Cedar Creek Ecosystem Science Reserve in Central Minnesota, USA. The productivity-biodiversity relationship for the fire treatment plots showed a hump-shaped model with adjusted R2=0.37, whereas the relationship for the non-burned plots were non-significant. The relationship between SR and spectral diversity (SD) were positive linear for both treatments; however, the relationship for plots with fire treatment was higher (adjusted R2 = 0.34 vs. 0.19). It is assumed that post-fire foliar nutrients increase soil nitrogen and phosphorus which facilitate post-fire growth and induce higher above-ground biomass and chlorophyll content in plants. Overall, the results of this study showed that management practices affect the productivity-biodiversity relationship and illustrated the effect of fire treatment on remote sensing of biodiversity.

Gross primary production controls the subsequent winter CO2 exchange in a boreal peatland.

PubMed

Zhao, Junbin; Peichl, Matthias; Öquist, Mats; Nilsson, Mats B

2016-12-01

In high-latitude regions, carbon dioxide (CO 2 ) emissions during the winter represent an important component of the annual ecosystem carbon budget; however, the mechanisms that control the winter CO 2 emissions are currently not well understood. It has been suggested that substrate availability from soil labile carbon pools is a main driver of winter CO 2 emissions. In ecosystems that are dominated by annual herbaceous plants, much of the biomass produced during the summer is likely to contribute to the soil labile carbon pool through litter fall and root senescence in the autumn. Thus, the summer carbon uptake in the ecosystem may have a significant influence on the subsequent winter CO 2 emissions. To test this hypothesis, we conducted a plot-scale shading experiment in a boreal peatland to reduce the gross primary production (GPP) during the growing season. At the growing season peak, vascular plant biomass in the shaded plots was half that in the control plots. During the subsequent winter, the mean CO 2 emission rates were 21% lower in the shaded plots than in the control plots. In addition, long-term (2001-2012) eddy covariance data from the same site showed a strong correlation between the GPP (particularly the late summer and autumn GPP) and the subsequent winter net ecosystem CO 2 exchange (NEE). In contrast, abiotic factors during the winter could not explain the interannual variation in the cumulative winter NEE. Our study demonstrates the presence of a cross-seasonal link between the growing season biotic processes and winter CO 2 emissions, which has important implications for predicting winter CO 2 emission dynamics in response to future climate change. © 2016 John Wiley & Sons Ltd.

Principal component analysis and hydrochemical facies characterization to evaluate groundwater quality in Varahi river basin, Karnataka state, India

NASA Astrophysics Data System (ADS)

Ravikumar, P.; Somashekar, R. K.

2017-05-01

The present study envisages the importance of graphical representations like Piper trilinear diagram and Chadha's plot, respectively to determine variation in hydrochemical facies and understand the evolution of hydrochemical processes in the Varahi river basin. The analytical values obtained from the groundwater samples when plotted on Piper's and Chadha's plots revealed that the alkaline earth metals (Ca2+, Mg2+) are significantly dominant over the alkalis (Na+, K+), and the strong acidic anions (Cl-, SO4 2-) dominant over the weak acidic anions (CO3 2-, HCO3 -). Further, Piper trilinear diagram classified 93.48 % of the samples from the study area under Ca2+-Mg2+-Cl--SO4 2- type and only 6.52 % samples under Ca2+-Mg2+-HCO3 - type. Interestingly, Chadha's plot also demonstrated the dominance of reverse ion exchange water having permanent hardness (viz., Ca-Mg-Cl type) in majority of the samples over recharging water with temporary hardness (i.e., Ca-Mg-HCO3 type). Thus, evaluation of hydrochemical facies from both the plots highlighted the contribution from the reverse ion exchange processes in controlling geochemistry of groundwater in the study area. Further, PCA analysis yielded four principal components (PC1, PC2, PC3 and PC4) with higher eigen values of 1.0 or more, accounting for 65.55, 10.17, 6.88 and 6.52 % of the total variance, respectively. Consequently, majority of the physico-chemical parameters (87.5 %) loaded under PC1 and PC2 were having strong positive loading (>0.75) and these are mainly responsible for regulating the hydrochemistry of groundwater in the study area.

Comparison Tools for Assessing the Microgravity Environment of Missions, Carriers and Conditions

NASA Technical Reports Server (NTRS)

DeLombard, Richard; McPherson, Kevin; Moskowitz, Milton; Hrovat, Ken

1997-01-01

The Principal Component Spectral Analysis and the Quasi-steady Three-dimensional Histogram techniques provide the means to describe the microgravity acceleration environment of an entire mission on a single plot. This allows a straight forward comparison of the microgravity environment between missions, carriers, and conditions. As shown in this report, the PCSA and QTH techniques bring both the range and median of the microgravity environment onto a single page for an entire mission or another time period or condition of interest. These single pages may then be used to compare similar analyses of other missions, time periods or conditions. The PCSA plot is based on the frequency distribution of the vibrational energy and is normally used for an acceleration data set containing frequencies above the lowest natural frequencies of the vehicle. The QTH plot is based on the direction and magnitude of the acceleration and is normally used for acceleration data sets with frequency content less than 0.1 Hz. Various operating conditions are made evident by using PCSA and QTH plots. Equipment operating either full or part time with sufficient magnitude to be considered a disturbance is very evident as well as equipment contributing to the background acceleration environment. A source's magnitude and/or frequency variability is also evident by the source's appearance on a PCSA plot. The PCSA and QTH techniques are valuable tools for extracting useful information from acceleration data taken over large spans of time. This report shows that these techniques provide a tool for comparison between different sets of microgravity acceleration data, for example different missions, different activities within a mission, and/or different attitudes within a mission. These techniques, as well as others, may be employed in order to derive useful information from acceleration data.

Extracting the quark mixing phase γ from B±→K±π+π-, B0→Ksπ+π-, and B¯0→Ksπ+π-

NASA Astrophysics Data System (ADS)

Bediaga, Ignacio; Guerrer, Gabriel; de Miranda, Jussara M.

2007-10-01

We discuss some aspects of the search for CP asymmetry in the three body B decays, revealed through the interference among neighbor resonances in the Dalitz plot. We propose a competitive method to extract the CKM γ angle combining Dalitz plot amplitude analysis of B±→K±π+π- and untagged B0, B¯0→Ksπ+π-. The method also obtains the ratio and phase difference between the tree and penguin contributions from B0 and B¯0→K*±π∓ decays and the CP asymmetry between B0 and B¯0. From Monte Carlo studies of 100 K events for the neutral mesons, we show the possibility of measuring γ.

How grazing and soil quality affect native and exotic plant diversity in Rocky Mountain grasslands

USGS Publications Warehouse

Stohlgren, T.J.; Schell, L.D.; Vanden, Heuvel B.

1999-01-01

We used multiscale plots to sample vascular plant diversity and soil characteristics in and adjacent to 26 long-term grazing exclosure sites in Colorado, Wyoming, Montana, and South Dakota, USA. The exclosures were 7-60 yr old (31.2 ?? 2.5 yr, mean ?? 1 SE). Plots were also randomly placed in the broader landscape in open rangeland in the same vegetation type at each site to assess spatial variation in grazed landscapes. Consistent sampling in the nine National Parks, Wildlife Refuges, and other management units yielded data from 78 1000-m2 plots and 780 1-m2 subplots. We hypothesized that native species richness would be lower in the exclosures than in grazed sites, due to competitive exclusion in the absence of grazing. We also hypothesized that grazed sites would have higher native and exotic species richness compared to ungrazed areas, due to disturbance (i.e., the intermediate-disturbance hypothesis) and the conventional wisdom that grazing may accelerate weed invasion. Both hypotheses were soundly rejected. Although native species richness in 1-m2 subplots was significantly higher (P < 0.05) in grazed sites, we found nearly identical native or exotic species richness in 1000-m2 plots in exclosures (31.5 ?? 2.5 native and 3.1 ?? 0.5 exotic species), adjacent grazed plots (32.6 ?? 2.8 native and 3.2 ?? 0.6 exotic species), and randomly selected grazed plots (31.6 ?? 2.9 native and 3.2 ?? 0.6 exotic species). We found no significant differences in species diversity (Hill's diversity indices, N1 and N2), evenness (Hill's ratio of evenness, E5), cover of various life-forms (grasses, forbs, and shrubs), soil texture, or soil percentage of N and C between grazed and ungrazed sites at the 1000-m2 plot scale. The species lists of the long-ungrazed and adjacent grazed plots overlapped just 57.9 ?? 2.8%. This difference in species composition is commonly attributed solely to the difference in grazing regimes. However, the species lists between pairs of grazed plots (adjacent and distant 1000-m2 plots) in the same vegetation type overlapped just 48.6 ?? 3.6%, and the ungrazed plots and distant grazed plots overlapped 49.4 ?? 3.6%. Differences in vegetation and soils between grazed and ungrazed sites were minimal in most cases, but soil characteristics and elevation were strongly correlated with native and exotic plant diversity in the study region. For the 78 1000-m2 plots, 59.4% of the variance in total species richness was explained by percentage of silt (coefficient = 0.647, t = 5.107, P < 0.001), elevation (coefficient = 0.012, t = 5.084, P < 0.001), and total foliar cover (coefficient = 0.110, t = 2.104, P < 0.039). Only 12.8% of the variance in exotic species cover (log10cover) was explained by percentage of clay (coefficient = -0.011, t = -2.878, P < 0.005), native species richness (coefficient = -0.011, t = -2.156, P < 0.034), and log10N (coefficient = 2.827, t = 1.860, P < 0.067). Native species cover and exotic species richness and frequency were also significantly positively correlated with percentage of soil N at the 1000-m2 plot scale. Our research led to five broad generalizations about current levels of grazing in these Rocky Mountain grasslands: (1) grazing probably has little effect on native species richness at landscape scales; (2) grazing probably has little effect on the accelerated spread of most exotic plant species at landscape scales; (3) grazing affects local plant species and life-form composition and cover, but spatial variation is considerable; (4) soil characteristics, climate, and disturbances may have a greater effect on plant species diversity than do current levels of grazing; and (5) few plant species show consistent, directional responses to grazing or cessation of grazing.

Alpine plant community controls on ecosystem N pools under the influence of N deposition using an enriched 15N tracer experiment

NASA Astrophysics Data System (ADS)

Churchill, A. C.; Bowman, W. D.

2016-12-01

Plant communities are assemblages of species with unique traits, and by comparing different communities we can infer how those traits affect ecosystem processes. In particular, plant feedbacks affecting the N cycle can drive processing of N in numerous pools within an ecosystem, both as individuals and as a part of the larger community. Global nitrogen (N) deposition rates have increased dramatically since the industrial revolution and an understanding of how plant feedbacks may contribute to ecosystem responses is needed. We used an enriched 15N isotope tracer to compare ecosystem N pools associated with plant processing of N among three alpine plant communities (dry, moist, and wet meadows) with diverse characteristics. We applied NH4NO3 as a fertilizer at two treatment levels, ambient deposition (control) and 30 kg N ha-1 yr-1 (fertilized) and collected measurements of enrichment in ecosystem plant and soil N pools following two growing seasons after our application of the isotopic tracer (fall 2014 and fall 2015). We found that the 15N enrichment (‰) of aboveground plant litter declined in all communities between 2014 and 2015, with greater loss of enrichment in fertilized plots in both the dry and wet meadow communities. This decline between years is expected, as litter is decomposed or if plants translocate N into belowground structures, however these results suggest that increased N deposition promotes plant N leakiness for communities with higher species diversity. Despite this trend, aboveground litter from fertilized plots remained more enriched than controls in both the dry and wet meadow communities, perhaps associated with overall greater capacity of those plant individuals to retain N. For control plots, the 15N enrichment of aboveground plant litter was comparable among the dry and moist communities, but the wet meadow was more enriched relative to the moist meadow. Fertilized plots showed a different pattern of enrichment: moist meadow < dry meadow < wet meadow. In both instances microbial processing of soil N may promote enrichment of plant available N during the growing season following our tracer application, however moist meadows have more water availability than dry meadows suggesting examination of other N pools will be necessary to determine where the tracer is being stabilized.

Effects of Stigmasterol and β-Sitosterol on Nonalcoholic Fatty Liver Disease in a Mouse Model: A Lipidomic Analysis.

PubMed

Feng, Simin; Gan, Ling; Yang, Chung S; Liu, Anna B; Lu, Wenyun; Shao, Ping; Dai, Zhuqing; Sun, Peilong; Luo, Zisheng

2018-04-04

To study the effects of stigmasterol and β-sitosterol on high-fat Western diet (HFWD)-induced nonalcoholic fatty liver disease (NAFLD), lipidomic analyses were conducted in liver samples collected after 33 weeks of the treatment. Principal component analysis showed these phytosterols were effective in protecting against HFWD-induced NAFLD. Orthogonal projections to latent structures-discriminate analysis (OPLS-DA) and S-plots showed that triacylglycerols (TGs), phosphatidylcholines, cholesteryl esters, diacylglycerols, and free fatty acids (FFAs) were the major lipid species contributing to these discriminations. The alleviation of NAFLD is mainly associated with decreases in hepatic cholesterol, TGs with polyunsaturated fatty acids, and alterations of free hepatic FFA. In conclusion, phytosterols, at a dose comparable to that suggested for humans by the FDA for the reduction of plasma cholesterol levels, are shown to protect against NAFLD in this long-term (33-week) study.

An Annotated Bibliography of Spanish Readers for Levels I-IV.

ERIC Educational Resources Information Center

Morrow, Judith C.

Introductory remarks and suggestions for the possible use of reading materials included in this annotated bibliography precede the 38 entries classified according to grade level. The informational data includes: author, title, source, and availability. Annotations refer to format, level indicated, grammar, theme or plot, projected teaching use,…

Farmers' awareness on landslide susceptibility on their plots: a first step towards household resilience in the Rwenzori region, Western Uganda

NASA Astrophysics Data System (ADS)

Mertens, Kewan; Jacobs, Lies; Maes, Jan; Kervyn, Matthieu; Vranken, Liesbet

2016-04-01

In the mountainous area of the Rwenzori region, western Uganda, landslides frequently destroy houses and plots of farmers living and cultivating on unstable slopes. The impact of these landslides on the local livelihoods depends on the exposure and the resilience of the households. Both the exposure and the resilience can be modified to a certain extent with specific measures, e.g. planting slope stabilizing trees of paying for (informal) insurance. The adoption of such measures and the willingness to accept measures imposed by local governments crucially depends on the local awareness of landslide risk. The aim of this research is to estimate awareness on landslide susceptibility, as a proxy for landslide risk, among household heads in a landslide prone area in the Rwenzori region, Western Uganda. The objective is to compare household and plot characteristics between aware and unaware households. This will allow us to identify those households which are less aware of landslide susceptibility and therefore most likely to be less resilient when exposed to landslide risk. We use data from a susceptibility map constructed in 2016 and a structured household survey conducted in the Rwenzori region in 2015. The susceptibility map is based on a SRTM 30m DEM and validated with field observations, while the household survey includes the answers of more than 450 households that have been asked to evaluate the landslide susceptibility on their plots. Simple probit models at plot level are used to compare the estimated landslide susceptibility with the modelled susceptibility. We use this comparison to identify the household characteristics of those households that do not correctly estimate the landslide susceptibility on their plots. We will exploit the fact that landslide susceptibility is very space specific and that households can therefore have plots in both susceptible and unsusceptible areas. The research is currently ongoing, but we hypothesize that younger farmers with a lower education level, lower trust, social capital and networks and with a recent migration history are less able to estimate landslide susceptibility on their plots. Literature on other disasters has demonstrated that human capital, social networks and past experience are crucial factors in determining risk perception. To our knowledge this is the first study to specifically investigate landslide risk awareness in a developing country, integrating both detailed socio-economic and geographical data. While estimating the awareness of landslide susceptibility is not sufficient to come to an estimation of a household's coping capacity, we consider it to be a first and necessary step towards a full estimation of household resilience.

Deviation from Normal Boltzmann Distribution of High-lying Energy Levels of Iron Atom Excited by Okamoto-cavity Microwave-induced Plasmas Using Pure Nitrogen and Nitrogen-Oxygen Gases.

PubMed

Wagatsuma, Kazuaki

2015-01-01

This paper describes several interesting excitation phenomena occurring in a microwave-induced plasma (MIP) excited with Okamoto-cavity, especially when a small amount of oxygen was mixed with nitrogen matrix in the composition of the plasma gas. An ion-to-atom ratio of iron, which was estimated from the intensity ratio of ion to atomic lines having almost the same excitation energy, was reduced by adding oxygen gas to the nitrogen MIP, eventually contributing to an enhancement in the emission intensities of the atomic lines. Furthermore, Boltzmann plots for iron atomic lines were observed in a wide range of the excitation energy from 3.4 to 6.9 eV, indicating that plots of the atomic lines having lower excitation energies (3.4 to 4.8 eV) were well fitted on a straight line while those having more than 5.5 eV deviated upwards from the linear relationship. This overpopulation would result from any other excitation process in addition to the thermal excitation that principally determines the Boltzmann distribution. A Penning-type collision with excited species of nitrogen molecules probably explains this additional excitation mechanism, in which the resulting iron ions recombine with captured electrons, followed by cascade de-excitations between closely-spaced excited levels just below the ionization limit. As a result, these high-lying levels might be more populated than the low-lying levels of iron atom. The ionization of iron would be caused less actively in the nitrogen-oxygen plasma than in a pure nitrogen plasma, because excited species of nitrogen molecule, which can provide the ionization energy in a collision with iron atom, are consumed through collisions with oxygen molecules to cause their dissociation. It was also observed that the overpopulation occurred to a lesser extent when oxygen gas was added to the nitrogen plasma. The reason for this was also attributed to decreased number density of the excited nitrogen species due to collisions with oxygen molecule.

Geographic Variations in Cardiovascular Health in the United States: Contributions of State- and Individual-Level Factors

PubMed Central

Gebreab, Samson Y; Davis, Sharon K; Symanzik, Jürgen; Mensah, George A; Gibbons, Gary H; Diez-Roux, Ana V

2015-01-01

Background Improving cardiovascular health (CVH) of all Americans by 2020 is a strategic goal of the American Heart Association. Understanding the sources of variation and identifying contextual factors associated with poor CVH may suggest important avenues for prevention. Methods and Results Cross-sectional data from the Behavioral Risk Factor Surveillance System for the year 2011 were linked to state-level coronary heart disease and stroke mortality data from the National Vital Statistics System and to state-level measures of median household income, income inequality, taxes on soda drinks and cigarettes, and food and physical activity environments from various administrative sources. Poor CVH was defined according to the American Heart Association definition using 7 self-reported CVH metrics (current smoking, physical inactivity, obesity, poor diet, hypertension, diabetes, and high cholesterol). Linked micromap plots and multilevel logistic models were used to examine state variation in poor CVH and to investigate the contributions of individual- and state-level factors to this variation. We found significant state-level variation in the prevalence of poor CVH (median odds ratio 1.32, P<0.001). Higher rates of poor CVH and cardiovascular disease mortality were clustered in the southern states. Minority and low socioeconomic groups were strongly associated with poor CVH and explained 51% of the state-level variation in poor CVH; state-level factors explained an additional 28%. State-level median household income (odds ratio 0.89; 95% CI 0.84–0.94), taxes on soda drinks (odds ratio 0.94; 95% CI 0.89–0.99), farmers markets (odds ratio 0.91; 95% CI 0.85–0.98), and convenience stores (odds ratio 1.09; 95% CI 1.01–1.17) were predictive of poor CVH even after accounting for individual-level factors. Conclusions There is significant state-level variation in poor CVH that is partly explained by individual- and state-level factors. Additional longitudinal research is warranted to examine the influence of state-level policies and food and physical activity environments on poor CVH. PMID:26019131

Time compression of soil erosion by the effect of largest daily event. A regional analysis of USLE database.

NASA Astrophysics Data System (ADS)

Gonzalez-Hidalgo, J. C.; Batalla, R.; Cerda, A.; de Luis, M.

2009-04-01

When Thornes and Brunsden wrote in 1977 "How often one hears the researcher (and no less the undergraduate) complain that after weeks of observation "nothing happened" only to learn that, the day after his departure, a flood caused unprecedent erosion and channel changes!" (Thornes and Brunsden, 1977, p. 57), they focussed on two different problems in geomorphological research: the effects of extreme events and the temporal compression of geomorphological processes. The time compression is one of the main characteristic of erosion processes. It means that an important amount of the total soil eroded is produced in very short temporal intervals, i.e. few events mostly related to extreme events. From magnitude-frequency analysis we know that few events, not necessarily extreme by magnitude, produce high amount of geomorphological work. Last but not least, extreme isolated events are a classical issue in geomorphology by their specific effects, and they are receiving permanent attention, increased at present because of scenarios of global change. Notwithstanding, the time compression of geomorphological processes could be focused not only on the analysis of extreme events and the traditional magnitude-frequency approach, but on new complementary approach based on the effects of largest events. The classical approach define extreme event as a rare event (identified by its magnitude and quantified by some deviation from central value), while we define largest events by the rank, whatever their magnitude. In a previous research on time compression of soil erosion, using USLE soil erosion database (Gonzalez-Hidalgo et al., EGU 2007), we described a relationship between the total amount of daily erosive events recorded by plot and the percentage contribution to total soil erosion of n-largest aggregated daily events. Now we offer a further refined analysis comparing different agricultural regions in USA. To do that we have analyzed data from 594 erosion plots from USLE database with different record periods, and located in different climatic regions. Results indicate that there are no significant differences in the mean contribution of aggregated 5-largest daily erosion events between different agricultural divisions (i.e. different regional climate), and the differences detected can be attributed to specific site and plots conditions. Expected contribution of 5-largest daily event for 100 total daily events recorded is estimated around 40% of total soil erosion. We discuss the possible causes of such results and the applicability of them to the design of field research on soil erosion plots.

Assessment at full scale of nozzle/wing geometry effects on OTW aeroacoustic characteristics. [Over The Wing STOL engine configurations

NASA Technical Reports Server (NTRS)

Groesbeck, D.; Von Glahn, U.

1979-01-01

The effects on acoustic characteristics of nozzle type and location on a wing for STOL engine over-the-wing configurations are assessed at full scale on the basis of model-scale data. Three types of nozzle configurations are evaluated: a circular nozzle with external deflector mounted above the wing, a slot nozzle with external deflector mounted on the wing and a slot nozzle mounted on the wing. Nozzle exhaust plane locations with respect to the wing leading edge are varied from 10 to 46 percent chord (flaps retracted) with flap angles of 20 deg (take-off attitude) and 60 deg (approach attitude). Perceived noise levels (PNL) are calculated as a function of flyover distance at 152 m altitude. From these plots, static EPNL values, defined as flyover relative noise levels, are calculated and plotted as a function of lift and thrust ratios. From such plots the acoustic benefits attributable to variations in nozzle/deflector/wing geometry at full scale are assessed for equal aerodynamic performance.

Biotic homogenization can decrease landscape-scale forest multifunctionality.

PubMed

van der Plas, Fons; Manning, Pete; Soliveres, Santiago; Allan, Eric; Scherer-Lorenzen, Michael; Verheyen, Kris; Wirth, Christian; Zavala, Miguel A; Ampoorter, Evy; Baeten, Lander; Barbaro, Luc; Bauhus, Jürgen; Benavides, Raquel; Benneter, Adam; Bonal, Damien; Bouriaud, Olivier; Bruelheide, Helge; Bussotti, Filippo; Carnol, Monique; Castagneyrol, Bastien; Charbonnier, Yohan; Coomes, David Anthony; Coppi, Andrea; Bastias, Cristina C; Dawud, Seid Muhie; De Wandeler, Hans; Domisch, Timo; Finér, Leena; Gessler, Arthur; Granier, André; Grossiord, Charlotte; Guyot, Virginie; Hättenschwiler, Stephan; Jactel, Hervé; Jaroszewicz, Bogdan; Joly, François-Xavier; Jucker, Tommaso; Koricheva, Julia; Milligan, Harriet; Mueller, Sandra; Muys, Bart; Nguyen, Diem; Pollastrini, Martina; Ratcliffe, Sophia; Raulund-Rasmussen, Karsten; Selvi, Federico; Stenlid, Jan; Valladares, Fernando; Vesterdal, Lars; Zielínski, Dawid; Fischer, Markus

2016-03-29

Many experiments have shown that local biodiversity loss impairs the ability of ecosystems to maintain multiple ecosystem functions at high levels (multifunctionality). In contrast, the role of biodiversity in driving ecosystem multifunctionality at landscape scales remains unresolved. We used a comprehensive pan-European dataset, including 16 ecosystem functions measured in 209 forest plots across six European countries, and performed simulations to investigate how local plot-scale richness of tree species (α-diversity) and their turnover between plots (β-diversity) are related to landscape-scale multifunctionality. After accounting for variation in environmental conditions, we found that relationships between α-diversity and landscape-scale multifunctionality varied from positive to negative depending on the multifunctionality metric used. In contrast, when significant, relationships between β-diversity and landscape-scale multifunctionality were always positive, because a high spatial turnover in species composition was closely related to a high spatial turnover in functions that were supported at high levels. Our findings have major implications for forest management and indicate that biotic homogenization can have previously unrecognized and negative consequences for large-scale ecosystem multifunctionality.

Biotic homogenization can decrease landscape-scale forest multifunctionality

PubMed Central

van der Plas, Fons; Manning, Pete; Soliveres, Santiago; Allan, Eric; Scherer-Lorenzen, Michael; Verheyen, Kris; Wirth, Christian; Zavala, Miguel A.; Ampoorter, Evy; Baeten, Lander; Barbaro, Luc; Bauhus, Jürgen; Benavides, Raquel; Benneter, Adam; Bonal, Damien; Bouriaud, Olivier; Bruelheide, Helge; Bussotti, Filippo; Carnol, Monique; Castagneyrol, Bastien; Charbonnier, Yohan; Coppi, Andrea; Bastias, Cristina C.; Dawud, Seid Muhie; De Wandeler, Hans; Domisch, Timo; Finér, Leena; Granier, André; Grossiord, Charlotte; Guyot, Virginie; Hättenschwiler, Stephan; Jactel, Hervé; Jaroszewicz, Bogdan; Joly, François-xavier; Jucker, Tommaso; Koricheva, Julia; Milligan, Harriet; Mueller, Sandra; Muys, Bart; Nguyen, Diem; Pollastrini, Martina; Ratcliffe, Sophia; Raulund-Rasmussen, Karsten; Selvi, Federico; Stenlid, Jan; Valladares, Fernando; Vesterdal, Lars; Zielínski, Dawid; Fischer, Markus

2016-01-01

Many experiments have shown that local biodiversity loss impairs the ability of ecosystems to maintain multiple ecosystem functions at high levels (multifunctionality). In contrast, the role of biodiversity in driving ecosystem multifunctionality at landscape scales remains unresolved. We used a comprehensive pan-European dataset, including 16 ecosystem functions measured in 209 forest plots across six European countries, and performed simulations to investigate how local plot-scale richness of tree species (α-diversity) and their turnover between plots (β-diversity) are related to landscape-scale multifunctionality. After accounting for variation in environmental conditions, we found that relationships between α-diversity and landscape-scale multifunctionality varied from positive to negative depending on the multifunctionality metric used. In contrast, when significant, relationships between β-diversity and landscape-scale multifunctionality were always positive, because a high spatial turnover in species composition was closely related to a high spatial turnover in functions that were supported at high levels. Our findings have major implications for forest management and indicate that biotic homogenization can have previously unrecognized and negative consequences for large-scale ecosystem multifunctionality. PMID:26979952

Evaluation of the Persistence and Leaching Behaviour of Thiram Fungicide in Soil, Water and Oil Palm Leaves.

PubMed

Maznah, Zainol; Halimah, Muhamad; Ismail, B Sahid

2018-05-01

The residual levels and persistence of thiram in the soil, water and oil palm seedling leaves were investigated under field conditions. The experimental plots were carried out on a clay loam soil and applied with three treatments namely; manufacturer's recommended dosage (25.6 g a.i. plot -1 ), manufacturer's double recommended dosage (51.2 g a.i. plot -1 ), and control (water) were applied. Thiram residues were detected in the soil from day 0 to day 3 in the range of 0.22-27.04 mg kg -1 . Low concentrations of thiram were observed in the water and leave samples in the range of 0.27-2.52 mg L -1 and 1.34-12.28 mg kg -1 , respectively. Results have shown that thiram has a rapid degradation and has less persistence due to climatic factors. These findings suggest that thiram is safe when applied at manufacturer's recommended dosage on oil palm seedlings due to low residual levels observed in soil and water bodies.

The effect of shade and vermicompost application on yield and flavonoid levels of Tempuyung (Sonchus arvensis)

NASA Astrophysics Data System (ADS)

Putri, D. P.; Widyastuti, Y.; Dewi, W. S.; Yunus, A.

2018-03-01

This study aims to determine the effect of shade and vermicompost on yield and level of flavonoids in Tempuyung (Sonchus arvensis). The study was conducted in May- August 2016, in Tegal Gede Village, Kab. Karanganyar. Secondary metabolite content analysis was performed in B2P2TOOT laboratory, Tawangmangu. This study used a Completely Randomized Design (CRD) arranged in a split plot. Treatment consists of shade as main plot and the dose of vermicompost as sub plot. Shade treatments are 0% (without shade), 50% and 75%. The dose of vermicompost are 0 g / polybag (control), 250 g / polybag, 500 g / polybag and 750 g / polybag. Each treatment was repeated 3 times and each in experimental unit consist of 2 sample plants. The results showed that the higher levels of shade tend to decrease vegetative growth of plants. Moreover, vermicompost give significant effect on leaf weight, l number, wet and dry weight. The combination of 0% shade and 750 gram vermicompost gave the highest value (P <0.05) to leaf weight ± 186.68 g, wet weight ± 252.08 g and dry weight ± 30,76 gTempuyung. The combination of 50% shade with 0 g vermicompost and 75% shade with 250 g vermicompost show to increasing the content of flavonoid compounds.

Phosphorus and Compost Management Influence Maize (Zea mays) Productivity Under Semiarid Condition with and without Phosphate Solubilizing Bacteria.

PubMed

Amanullah; Khan, Adil

2015-01-01

Phosphorus (P) unavailability and lack of organic matter in the soils under semiarid climates are the two major constraints for low crop productivity. Field trial was conducted to study the effects of P levels, compost application times and seed inoculation with phosphate solubilizing bacteria (PSB) on the yield and yield components of maize (Zea mays L., cv. Azam). The experiment was conducted at the Agronomy Research Farm of The University of Agriculture Peshawar-Pakistan during summer 2014. The experiment was laid out in randomized complete block design with split plot arrangement using three replications. The two PSB levels [(1) inoculated seed with PSB (+) and (2) seed not inoculated with PSB (- or control)] and three compost application times (30, 15, and 0 days before sowing) combination (six treatments) were used as main plot factor, while four P levels (25, 50, 75, and 100 kg P ha(-1)) used as subplot factor. The results confirmed that compost applied at sowing time and P applied at the two higher rates (75 and 100 kg P ha(-1)) had significantly increased yield and yield components of maize under semiarid condition. Maize seed inoculated with PSB (+) had tremendously increased yield and yield components of maize over PSB-control plots (-) under semiarid condition.

Phosphorus and Compost Management Influence Maize (Zea mays) Productivity Under Semiarid Condition with and without Phosphate Solubilizing Bacteria

PubMed Central

Amanullah

2015-01-01

Phosphorus (P) unavailability and lack of organic matter in the soils under semiarid climates are the two major constraints for low crop productivity. Field trial was conducted to study the effects of P levels, compost application times and seed inoculation with phosphate solubilizing bacteria (PSB) on the yield and yield components of maize (Zea mays L., cv. Azam). The experiment was conducted at the Agronomy Research Farm of The University of Agriculture Peshawar-Pakistan during summer 2014. The experiment was laid out in randomized complete block design with split plot arrangement using three replications. The two PSB levels [(1) inoculated seed with PSB (+) and (2) seed not inoculated with PSB (- or control)] and three compost application times (30, 15, and 0 days before sowing) combination (six treatments) were used as main plot factor, while four P levels (25, 50, 75, and 100 kg P ha-1) used as subplot factor. The results confirmed that compost applied at sowing time and P applied at the two higher rates (75 and 100 kg P ha-1) had significantly increased yield and yield components of maize under semiarid condition. Maize seed inoculated with PSB (+) had tremendously increased yield and yield components of maize over PSB-control plots (-) under semiarid condition. PMID:26697038

Yields and content of ursolic acid in pearl grass (Hedyotis corymbosa) when utilizing cow manure fertilizer in different shades

NASA Astrophysics Data System (ADS)

Jayanti, L. D.; Yunus, A.; Pujiasmanto, B.; Widyastuti, Y.

2018-03-01

This study aims to examine the intensity of shade and proper dosage of fertilizer to maximize the content of ursolic acid and pearl grass yield. The field-run study was carried out at the Medicinal Plant Garden of the Research and Development of Medicinal Plants and Traditional Medicines (B2P2TOOT) and the laboratory research was conducted at the B2P2TOOT Phytochemistry Laboratory. The experiment design was Randomized Complete Block Design with Split Plot pattern with the intensity (three levels) as main plot and fertilizer dosage (four levels) as sub plot. The data obtained were analyzed using the variance analysis, if there were significant differences tested further by using Duncan’s Multiple Range Test (DMRT) with 95% confidence level. The results showed that shade treatment gave significant effects on plant height, number of branches, root length, fresh weight and dry weight. The treatment of a fertilizer dosage 15 tons/ha gave the best results on fresh weight and dry weight. The combination of N0K0 treatment (without shade, without cow manure) resulted in the highest quality of ursolic acid as it featured a light blue color when detected under UV366 light.

A system-level view of optimizing high-channel-count wireless biosignal telemetry.

PubMed

Chandler, Rodney J; Gibson, Sarah; Karkare, Vaibhav; Farshchi, Shahin; Marković, Dejan; Judy, Jack W

2009-01-01

In this paper we perform a system-level analysis of a wireless biosignal telemetry system. We perform an analysis of each major system component (e.g., analog front end, analog-to-digital converter, digital signal processor, and wireless link), in which we consider physical, algorithmic, and design limitations. Since there are a wide range applications for wireless biosignal telemetry systems, each with their own unique set of requirements for key parameters (e.g., channel count, power dissipation, noise level, number of bits, etc.), our analysis is equally broad. The net result is a set of plots, in which the power dissipation for each component and as the system as a whole, are plotted as a function of the number of channels for different architectural strategies. These results are also compared to existing implementations of complete wireless biosignal telemetry systems.

Sensitivity of Above-Ground Biomass Estimates to Height-Diameter Modelling in Mixed-Species West African Woodlands

PubMed Central

Aynekulu, Ermias; Pitkänen, Sari; Packalen, Petteri

2016-01-01

It has been suggested that above-ground biomass (AGB) inventories should include tree height (H), in addition to diameter (D). As H is a difficult variable to measure, H-D models are commonly used to predict H. We tested a number of approaches for H-D modelling, including additive terms which increased the complexity of the model, and observed how differences in tree-level predictions of H propagated to plot-level AGB estimations. We were especially interested in detecting whether the choice of method can lead to bias. The compared approaches listed in the order of increasing complexity were: (B0) AGB estimations from D-only; (B1) involving also H obtained from a fixed-effects H-D model; (B2) involving also species; (B3) including also between-plot variability as random effects; and (B4) involving multilevel nested random effects for grouping plots in clusters. In light of the results, the modelling approach affected the AGB estimation significantly in some cases, although differences were negligible for some of the alternatives. The most important differences were found between including H or not in the AGB estimation. We observed that AGB predictions without H information were very sensitive to the environmental stress parameter (E), which can induce a critical bias. Regarding the H-D modelling, the most relevant effect was found when species was included as an additive term. We presented a two-step methodology, which succeeded in identifying the species for which the general H-D relation was relevant to modify. Based on the results, our final choice was the single-level mixed-effects model (B3), which accounts for the species but also for the plot random effects reflecting site-specific factors such as soil properties and degree of disturbance. PMID:27367857

Uav-Based Photogrammetric Point Clouds and Hyperspectral Imaging for Mapping Biodiversity Indicators in Boreal Forests

NASA Astrophysics Data System (ADS)

Saarinen, N.; Vastaranta, M.; Näsi, R.; Rosnell, T.; Hakala, T.; Honkavaara, E.; Wulder, M. A.; Luoma, V.; Tommaselli, A. M. G.; Imai, N. N.; Ribeiro, E. A. W.; Guimarães, R. B.; Holopainen, M.; Hyyppä, J.

2017-10-01

Biodiversity is commonly referred to as species diversity but in forest ecosystems variability in structural and functional characteristics can also be treated as measures of biodiversity. Small unmanned aerial vehicles (UAVs) provide a means for characterizing forest ecosystem with high spatial resolution, permitting measuring physical characteristics of a forest ecosystem from a viewpoint of biodiversity. The objective of this study is to examine the applicability of photogrammetric point clouds and hyperspectral imaging acquired with a small UAV helicopter in mapping biodiversity indicators, such as structural complexity as well as the amount of deciduous and dead trees at plot level in southern boreal forests. Standard deviation of tree heights within a sample plot, used as a proxy for structural complexity, was the most accurately derived biodiversity indicator resulting in a mean error of 0.5 m, with a standard deviation of 0.9 m. The volume predictions for deciduous and dead trees were underestimated by 32.4 m3/ha and 1.7 m3/ha, respectively, with standard deviation of 50.2 m3/ha for deciduous and 3.2 m3/ha for dead trees. The spectral features describing brightness (i.e. higher reflectance values) were prevailing in feature selection but several wavelengths were represented. Thus, it can be concluded that structural complexity can be predicted reliably but at the same time can be expected to be underestimated with photogrammetric point clouds obtained with a small UAV. Additionally, plot-level volume of dead trees can be predicted with small mean error whereas identifying deciduous species was more challenging at plot level.

Effects of litter addition on ectomycorrhizal associates of a lodgepole pine (Pinus contorta) stand in Yellowstone National Park

NASA Technical Reports Server (NTRS)

Cullings, Kenneth W.; New, Michael H.; Makhija, Shilpa; Parker, V. Thomas

2003-01-01

Increasing soil nutrients through litter manipulation, pollution, or fertilization can adversely affect ectomycorrhizal (EM) communities by inhibiting fungal growth. In this study, we used molecular genetic methods to determine the effects of litter addition on the EM community of a Pinus contorta stand in Yellowstone National Park that regenerated after a stand-replacing fire. Two controls were used; in unmodified control plots nothing was added to the soil, and in perlite plots perlite, a chemically neutral substance, was added to maintain soil moisture and temperature at levels similar to those under litter. We found that (i) species richness did not change significantly following perlite addition (2.6 +/- 0.3 species/core in control plots, compared with 2.3 +/- 0.3 species/core in perlite plots) but decreased significantly (P < 0.05) following litter addition (1.8 +/- 0.3 species/core); (ii) EM infection was not affected by the addition of perlite but increased significantly (P < 0.001) in response to litter addition, and the increase occurred only in the upper soil layer, directly adjacent to the added litter; and (iii) Suillus granulatus, Wilcoxina mikolae, and agaricoid DD were the dominant organisms in controls, but the levels of W. mikolae and agaricoid DD decreased significantly in response to both perlite and litter addition. The relative levels of S. granulatus and a fourth fungus, Cortinariaceae species 2, increased significantly (P < 0.01 and P < 0.05, respectively) following litter addition. Thus, litter addition resulted in some negative effects that may be attributable to moisture-temperature relationships rather than to the increased nutrients associated with litter. Some species respond positively to litter addition, indicating that there are differences in their physiologies. Hence, changes in the EM community induced by litter accumulation also may affect ecosystem function.

Effects of Cover Crop Species and Season on Population Dynamics of Escherichia coli and Listeria innocua in Soil

PubMed Central

Reed-Jones, Neiunna L.; Marine, Sasha Cahn; Everts, Kathryne L.

2016-01-01

Cover crops provide several ecosystem services, but their impact on enteric bacterial survival remains unexplored. The influence of cover cropping on foodborne pathogen indicator bacteria was assessed in five cover crop/green manure systems: cereal rye, hairy vetch, crimson clover, hairy vetch-rye and crimson clover-rye mixtures, and bare ground. Cover crop plots were inoculated with Escherichia coli and Listeria innocua in the fall of 2013 and 2014 and tilled into the soil in the spring to form green manure. Soil samples were collected and the bacteria enumerated. Time was a factor for all bacterial populations studied in all fields (P < 0.001). E. coli levels declined when soil temperatures dipped to <5°C and were detected only sporadically the following spring. L. innocua diminished somewhat but persisted, independently of season. In an organic field, the cover crop was a factor for E. coli in year 1 (P = 0.004) and for L. innocua in year 2 (P = 0.011). In year 1, E. coli levels were highest in the rye and hairy vetch-rye plots. In year 2, L. innocua levels were higher in hairy vetch-rye (P = 0.01) and hairy vetch (P = 0.03) plots than in the rye plot. Bacterial populations grew (P < 0.05) or remained the same 4 weeks after green manure incorporation, although initial reductions in L. innocua numbers were observed after tilling (P < 0.05). Green manure type was a factor only for L. innocua abundance in a transitional field (P < 0.05). Overall, the impacts of cover crops/green manures on bacterial population dynamics in soil varied, being influenced by bacterial species, time from inoculation, soil temperature, rainfall, and tillage; this reveals the need for long-term studies. PMID:26729724

Distribution of invasive ants and methods for their control in Hawai'i Volcanoes National Park

USGS Publications Warehouse

Peck, Robert W.; Banko, Paul C.; Snook, Kirsten; Euaparadorn, Melody

2013-01-01

The first invasive ants were detected in Hawai`i Volcanoes National Park (HAVO) more than 80 years ago. Ecological impacts of these ants are largely unknown, but studies in Hawai`i and elsewhere increasingly show that invasive ants can reduce abundance and diversity of native arthropod communities as well as disrupt pollination and food webs. Prior to the present study, knowledge of ant distributions in HAVO has primarily been restricted to road- and trail-side surveys of the Kīlauea and Mauna Loa Strip sections of the park. Due to the risks that ants pose to HAVO resources, understanding their distributions and identifying tools to eradicate or control populations of the most aggressive species is an important objective of park managers. We mapped ant distributions in two of the most intensively managed sections of the park, Mauna Loa Strip and Kahuku. We also tested the efficacy of baits to control the Argentine ant (Linepithema humile) and the big-headed ant (Pheidole megacephala), two of the most aggressive and ecologically destructive species in Hawai`i. Efficacy testing of formicidal bait was designed to provide park managers with options for eradicating small populations or controlling populations that occur at levels beyond which they can be eradicated. Within the Mauna Loa Strip and Kahuku sections of HAVO we conducted systematic surveys of ant distributions at 1625 stations covering nearly 200 km of roads, fences, and transects between August 2008 and April 2010. Overall, 15 ant species were collected in the two areas, with 12 being found on Mauna Loa Strip and 11 at Kahuku. Cardiocondyla kagutsuchi was most widespread at both sites, ranging in elevation from 920 to 2014 m, and was the only species found above 1530 m. Argentine ants and big-headed ants were also found in both areas, but their distributions did not overlap. Surveys of Argentine ants identified areas of infestation covering 560 ha at Mauna Loa Strip and 585 ha at Kahuku. At both sites, upper boundaries of big-headed ants coincided with lower boundaries of Argentine ants. Significantly, Wasmannia auropunctata (little fire ant) was not detected during our surveys. Formicidal baits tested for controlling Argentine ants included XstinguishTM (containing fipronil at 0.01%), Maxforce® (hydramethylnon 1.0%), and Australian Distance® (pyriproxyfen 0.5%). Each bait was distributed evenly over four 2500 m2 replicate plots. Applications were repeated approximately four weeks after the initial treatment. Plots were subdivided into 25 subplots and ants monitored within each subplot using paper cards containing tuna bait at approximately one week intervals for about 14 weeks. All treatments reduced ant numbers, but none eradicated ants on any of the plots. XstinguishTM produced a strong and lasting effect, depressing ant abundance below 1% of control plot levels within the first week and for about eight weeks afterward. Maxforce® was slower to attain maximum effectiveness, reducing ants to 8% of control levels after one week and 3% after six weeks. Australian Distance® was least effective, decreasing ant abundance to 19% of control levels after one week with numbers subsequently rebounding to 40% of controls at four weeks and 72% at 10 weeks. In measurements of the proportion of bait cards at which ants were detected, XstinguishTM clearly out-performed Maxforce®, reaching a minimum detection rate of 3% of bait cards at one week compared to a low of 19% for Maxforce® two weeks following the second treatment. Although ant abundances were dramatically reduced on XstinguishTM plots, it is not currently registered for use in the USA. Our results suggest that ant abundance can be greatly reduced using registered baits, but further research is needed before even small-scale eradication of Argentine ants can be achieved.  Formicidal baits tested to control big-headed ants included Amdro® (hydramethylnon 0.75%), XstinguishTM (fipronil 0.01%), Extinguish® Plus (a blend of hydramethylnon 0.365% and S- methoprene 0.25%), and Australian Distance® Plus (hydramethylnon 0.365% and pyriproxyfen 0.25%). Application methods were the same as used for Argentine ants, with baits being applied on two occasions (approximately four weeks apart) on four 2500 m2 replicate plots. All four baits reduced populations to below 2% of control plot levels within one week of treatment. Amdro® was particularly effective as no ants were detected on two of the four Amdro® plots immediately following treatment. Suppression was long-lived in three of the treatments; Amdro®, Australian Distance® Plus, and Extinguish® Plus all maintained ant abundances at levels less than 1% of control plots over 12 weeks of study. In contrast, ant abundances in XstinguishTM plots rose to 7% of control plots after four weeks and 20% after 10 weeks. Our results corroborate other recent studies indicating that small populations of big-headed ants can be controlled in natural areas using products registered in the USA. 

Advances in the Use of DNA Barcodes to Build a Community Phylogeny for Tropical Trees in a Puerto Rican Forest Dynamics Plot

Treesearch

W. John Kress; David L. Erickson; Nathan G. Swenson; Jill Thompson; Maria Uriarte; Jess K. Zimmerman; Jerome Chave

2010-01-01

BACKGROUND: Species number, functional traits, and phylogenetic history all contribute to characterizing the biological diversity in plant communities. The phylogenetic component of diversity has been particularly difficult to quantify in species-rich tropical tree assemblages. The compilation of previously published (and often incomplete) data on evolutionary...

Scattering from Rock and Rock Outcrops

DTIC Science & Technology

2014-09-30

orientations and size distributions reflect the internal fault organization of the bedrock. The plot in Fig. 3 displays experimentally determined PFA...mechanisms contributing could be scattering from small scale roughness combined with specular scattering from facets oriented close to normal incidence to...Larvik, Norway made with a stereo photogrammetry system. 7 IMPACT/APPLICATIONS The primary work completed over the course of this project

Analyzing lichen indicator data in the Forest Inventory and Analysis Program

Treesearch

Susan Will-Wolf

2010-01-01

Lichens are one of several forest health indicators sampled every year for a subset of plots on the permanent grid established by the Forest Inventory and Analysis (FIA) Program of the U.S. Department of Agriculture Forest Service. This report reviews analysis procedures for standard FIA lichen indicator data. Analyses of lichen data contribute to state, regional, and...

Mountain pine beetle-caused tree mortality in partially cut plots surrounded by unmanaged stands

Treesearch

J. M. Schmid; S. A. Mata

2005-01-01

Mountain pine beetle activity was monitored in one set of 2.5 acre plots in the southern portion of the Black Hills National Forest over a 17-year period. Beetles attacked 77 percent of the trees in the uncut control, 48 percent of the trees in the growing stock level (GSL) 100/110, 53 percent of the trees in the GSL 80/90, and 9 percent of the trees in the GSL 60/70....

Gas exchange and stand-level estimates of water use and gross primary productivity in an experimental pine and switchgrass intercrop forestry system on the Lower Coastal Plain of North Carolina, U.S.A

Treesearch

Janine M. Albaugha; Jean-Christophe Domeca; Chris A. Maier; Eric B. Sucre; Zakiya H. Leggett; John S. King

2014-01-01

Despite growing interest in using switchgrass (Panicum virgatum L.) as a biofuel, there are limiteddata on the physiology of this species and its effect on stand water use and carbon (C) assimilationwhen grown as a forest intercrop for bioenergy. Therefore, we quantified gas exchange rates of switch-grass within intercropped plots and in pure switchgrass plots during...

Direct analysis in real time mass spectrometry and multivariate data analysis: a novel approach to rapid identification of analytical markers for quality control of traditional Chinese medicine preparation.

PubMed

Zeng, Shanshan; Wang, Lu; Chen, Teng; Wang, Yuefei; Mo, Huanbiao; Qu, Haibin

2012-07-06

The paper presents a novel strategy to identify analytical markers of traditional Chinese medicine preparation (TCMP) rapidly via direct analysis in real time mass spectrometry (DART-MS). A commonly used TCMP, Danshen injection, was employed as a model. The optimal analysis conditions were achieved by measuring the contribution of various experimental parameters to the mass spectra. Salvianolic acids and saccharides were simultaneously determined within a single 1-min DART-MS run. Furthermore, spectra of Danshen injections supplied by five manufacturers were processed with principal component analysis (PCA). Obvious clustering was observed in the PCA score plot, and candidate markers were recognized from the contribution plots of PCA. The suitability of potential markers was then confirmed by contrasting with the results of traditional analysis methods. Using this strategy, fructose, glucose, sucrose, protocatechuic aldehyde and salvianolic acid A were rapidly identified as the markers of Danshen injections. The combination of DART-MS with PCA provides a reliable approach to the identification of analytical markers for quality control of TCMP. Copyright © 2012 Elsevier B.V. All rights reserved.

Contribution of ankle-foot orthosis moment in regulating ankle and knee motions during gait in individuals post-stroke.

PubMed

Kobayashi, Toshiki; Orendurff, Michael S; Singer, Madeline L; Gao, Fan; Foreman, K Bo

2017-06-01

Ankle-foot orthosis moment resisting plantarflexion has systematic effects on ankle and knee joint motion in individuals post-stroke. However, it is not known how much ankle-foot orthosis moment is generated to regulate their motion. The aim of this study was to quantify the contribution of an articulated ankle-foot orthosis moment to regulate ankle and knee joint motion during gait in individuals post-stroke. Gait data were collected from 10 individuals post-stroke using a Bertec split-belt instrumented treadmill and a Vicon 3-dimensional motion analysis system. Each participant wore an articulated ankle-foot orthosis whose moment resisting plantarflexion was adjustable at four levels. Ankle-foot orthosis moment while walking was calculated under the four levels based on angle-moment relationship of the ankle-foot orthosis around the ankle joint measured by bench testing. The ankle-foot orthosis moment and the joint angular position (ankle and knee) relationship in a gait cycle was plotted to quantify the ankle-foot orthosis moment needed to regulate the joint motion. Ankle and knee joint motion were regulated according to the amount of ankle-foot orthosis moment during gait. The ankle-foot orthosis maintained the ankle angular position in dorsiflexion and knee angular position in flexion throughout a gait cycle when it generated moment from -0.029 (0.011) to -0.062 (0.019) Nm/kg (moment resisting plantarflexion was defined as negative). Quantifying the contribution of ankle-foot orthosis moment needed to regulate lower limb joints within a specific range of motion could provide valuable criteria to design an ankle-foot orthosis for individuals post-stroke. Copyright © 2017 Elsevier Ltd. All rights reserved.

Wintertime aerosol chemical composition and source apportionment of the organic fraction across Ireland

NASA Astrophysics Data System (ADS)

Ovadnevaite, J.; Lin, C.; Ceburnis, D.; Huang, R. J. J.; O'Dowd, C. D. D.

2017-12-01

A national wide characterization of PM1 was studied for the first time using a high-time resolution Aerosol Chemical Speciation Monitor (ACSM) and Aethalometer in Ireland during the heating season. Dublin, the capital of Ireland, is the most polluted area with an average PM1 of 7.6 μg/m3, with frequent occurrence of peak concentration over 200 μg/m3 primarily due to solid fuels burning, while Mace Head, in the west coast, is least polluted with an average PM1 of 0.8 μg/m3 due to the distance from the emission sources. The organic aerosol is the most dominant species across Ireland, contributing 65%, 58%, 32%, 33% to total PM1 mass in Dublin, Birr, Carnsore Point, and Mace Head, respectively. Birr, a small town in the midland of Ireland, has comparable PM1 levels (4.8 μg/m3) and similar chemical compositions with that in Dublin. Carnsore Point, on the southeast coast, has similar composition with that at Mace Head, but nearly 3 times the levels of PM1 mass due to its relative closeness to other European countries. Positive matrix factorization (PMF) with the multi-linear engine (ME-2) was performed on the organic matrix to quantify the contribution of factor candidates. Peat burning was found to be the dominant factor across Ireland, contributing more than 40% of the total organic mass in Dublin and Birr while OOA is dominant at rural Carnsore Point and Mace Head. Possible geographic origins of PM1 species and organic factors using polar plots were explored. The findings of solid fuels burning (primarily peat burning) driving the pollution episodes suggest an elimination or controlled emission of solid fuels burning would reduce PM1 by at least 50%.

Storage and stability of biochar-derived carbon and total organic carbon in relation to minerals in an acid forest soil of the Spanish Atlantic area.

PubMed

Fernández-Ugalde, Oihane; Gartzia-Bengoetxea, Nahia; Arostegi, Javier; Moragues, Lur; Arias-González, Ander

2017-06-01

Biochar can largely contribute to enhance organic carbon (OC) stocks in soil and improve soil quality in forest and agricultural lands. Its contribution depends on its recalcitrance, but also on its interactions with minerals and other organic compounds in soil. Thus, it is important to study the link between minerals, natural organic matter and biochar in soil. In this study, we investigated the incorporation of biochar-derived carbon (biochar-C) into various particle-size fractions with contrasting mineralogy and the effect of biochar on the storage of total OC in the particle-size fractions in an acid loamy soil under Pinus radiata (C3 type) in the Spanish Atlantic area. We compared plots amended with biochar produced from Miscanthus sp. (C4 type) with control plots (not amended). We separated sand-, silt-, and clay-size fractions in samples collected from 0 to 20-cm depth. In each fraction, we analyzed clay minerals, metallic oxides and oxy-hydroxides, total OC and biochar-C. The results showed that 51% of the biochar-C was in fractions <20μm one year after the application of biochar. Biochar-C stored in clay-size fractions (0.2-2μm, 0.05-0.2μm, <0.05μm) was only 14%. Even so, we observed that biochar-C increased with decreasing particle-size in clay-size fractions, as it occurred with the vermiculitic phases and metallic oxides and oxy-hydroxides. Biochar also affected to the distribution of total OC among particle-size fractions. Total OC concentration was greater in fractions 2-20μm, 0.2-2μm, 0.05-0.2μm in biochar-amended plots than in control plots. This may be explained by the adsorption of dissolved OC from fraction <0.05μm onto biochar particles. The results suggested that interactions between biochar, minerals and pre-existing organic matter already occurred in the first year. Copyright © 2017 Elsevier B.V. All rights reserved.

SPRUCE Large-Collar In Situ CO2 and CH4 Flux Data for the SPRUCE Experimental Plots: Whole-Ecosystem-Warming

DOE Data Explorer

Hanson, P. J. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A.; Phillips, J. R. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A.; Riggs, J. S. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A.; Nettles, W. R. [Oak Ridge National Laboratory, U.S. Department of Energy, Oak Ridge, Tennessee, U.S.A.

2017-01-01

This data set reports community-level CO2 and CH4 flux measurements for the SPRUCE experimental study plots located in the S1-Bog. Surface flux measurements of CO2 and CH4 were made using open-path analyzers over an area of 1.13 m2 within each of 16 plots. A custom-designed chamber encloses the hummock-hollow topography and allows point in time measurements of the shrub, forb, Sphagnum spp. and the complex microbial community. These observations were made with ambient light and imposed dark conditions to allow estimates of community daytime and night respiratory processes. This data set is all inclusive – beginning in 2011 and continuing through the Whole-Ecosystem-Warming (WEW) phase of the experiment.

Species-specific transpiration responses to intermediate disturbance in a northern hardwood forest: Transpiration response to disturbance

DOE PAGES

Matheny, Ashley M.; Bohrer, Gil; Vogel, Christoph S.; ...

2014-12-04

Intermediate disturbances shape forest structure and composition, which may in turn alter carbon, nitrogen, and water cycling. We used a large-scale experiment in a forest in northern lower Michigan where we prescribed an intermediate disturbance by stem girdling all canopy-dominant early successional trees to simulate an accelerated age-related senescence associated with natural succession.Using 3 years of eddy covariance and sap flux measurements in the disturbed area and an adjacent control plot, we analyzed disturbance-induced changes to plot level and species-specific transpiration and stomatal conductance. We found transpiration to be ~15% lower in disturbed plots than in unmanipulated control plots. However,more » species-specific responses to changes in microclimate varied. While red oak and white pine showed increases in stomatal conductance during post disturbance (62.5 and 132.2%, respectively), redmaple reduced stomatal conductance by 36.8%. We used the hysteresis between sap flux and vapor pressure deficit to quantify diurnal hydraulic stress incurred by each species in both plots. Red oak, a ring porousanisohydric species, demonstrated the largest mean relative hysteresis, while red maple, bigtooth aspen, andpaper birch, all diffuse porous species, had the lowest relative hysteresis. We employed the Penman-Monteithmodel for LE to demonstrate that these species-specific responses to disturbance are not well captured using current modeling strategies and that accounting for changes to leaf area index and plot microclimate are insufffcient to fully describe the effects of disturbance on transpiration.« less

Funnel plots and choropleth maps in cancer risk communication: a comparison of tools for disseminating population-based incidence data to stakeholders

PubMed Central

Cusimano, Rosanna; Zarcone, Maurizio; Mazzola, Sergio; Vitale, Francesco

2017-01-01

Background Population-based cancer registries provide epidemiological cancer information, but the indicators are often too complex to be interpreted by local authorities and communities, due to numeracy and literacy limitations. The aim of this paper is to compare the commonly used visual formats to funnel plots to enable local public health authorities and communities to access valid and understandable cancer incidence data obtained at the municipal level. Methods A funnel plot representation of standardised incidence ratio (SIR) was generated for the 82 municipalities of the Palermo Province with the 2003–2011 data from the Palermo Province Cancer Registry (Sicily, Italy). The properties of the funnel plot and choropleth map methodologies were compared within the context of disseminating epidemiological data to stakeholders. Results The SIRs of all the municipalities remained within the control limits, except for Palermo city area (SIR=1.12), which was sited outside the upper control limit line of 99.8%. The Palermo Province SIRs funnel plot representation was congruent with the choropleth map generated from the same data, but the former resulted more informative as shown by the comparisons of the weaknesses and strengths of the 2 visual formats. Conclusions Funnel plot should be used as a complementary valuable tool to communicate epidemiological data of cancer registries to communities and local authorities, visually conveying an efficient and simple way to interpret cancer incidence data. PMID:28363917

Seasonal sediment dynamics shape temperate bedrock reef communities

USGS Publications Warehouse

Figurski, Jared D.; Freiwald, Jan; Lonhart, Steve I.; Storlazzi, Curt

2016-01-01

Mobilized seafloor sediment can impact benthic reef communities through burial, scour, and turbidity. These processes are ubiquitous in coastal oceans and, through their influence on the survival, fitness, and interactions of species, can alter the structure and function of benthic communities. In northern Monterey Bay, California, USA, as much as 30% of the seafloor is buried or exposed seasonally, making this an ideal location to test how subtidal temperate rocky reef communities vary in the presence and absence of chronic sediment-based disturbances. Designated dynamic plots were naturally inundated by sediment in summer (50 to 100% cover) and swept clean in winter, whereas designated stable plots remained free of sediment during our study. Multivariate analyses indicated significant differences in the structure of sessile and mobile communities between dynamic and stable reef habitats. For sessile species, community structure in disturbed plots was less variable in space and time than in stable plots due to the maintenance of an early successional state. In contrast, community structure of mobile species varied more in disturbed plots than in stable plots, reflecting how mobile species distribute in response to sediment dynamics. Some species were found only in these disturbed areas, suggesting that the spatial mosaic of disturbance could increase regional diversity. We discuss how the relative ability of species to tolerate disturbance at different life history stages and their ability to colonize habitat translate into community-level differences among habitats, and how this response varies between mobile and sessile communities.

Species-specific transpiration responses to intermediate disturbance in a northern hardwood forest

NASA Astrophysics Data System (ADS)

Matheny, Ashley M.; Bohrer, Gil; Vogel, Christoph S.; Morin, Timothy H.; He, Lingli; Frasson, Renato Prata de Moraes; Mirfenderesgi, Golnazalsadat; Schäfer, Karina V. R.; Gough, Christopher M.; Ivanov, Valeriy Y.; Curtis, Peter S.

2014-12-01

Intermediate disturbances shape forest structure and composition, which may in turn alter carbon, nitrogen, and water cycling. We used a large-scale experiment in a forest in northern lower Michigan where we prescribed an intermediate disturbance by stem girdling all canopy-dominant early successional trees to simulate an accelerated age-related senescence associated with natural succession. Using 3 years of eddy covariance and sap flux measurements in the disturbed area and an adjacent control plot, we analyzed disturbance-induced changes to plot level and species-specific transpiration and stomatal conductance. We found transpiration to be 15% lower in disturbed plots than in unmanipulated control plots. However, species-specific responses to changes in microclimate varied. While red oak and white pine showed increases in stomatal conductance during postdisturbance (62.5 and 132.2%, respectively), red maple reduced stomatal conductance by 36.8%. We used the hysteresis between sap flux and vapor pressure deficit to quantify diurnal hydraulic stress incurred by each species in both plots. Red oak, a ring porous anisohydric species, demonstrated the largest mean relative hysteresis, while red maple, bigtooth aspen, and paper birch, all diffuse porous species, had the lowest relative hysteresis. We employed the Penman-Monteith model for LE to demonstrate that these species-specific responses to disturbance are not well captured using current modeling strategies and that accounting for changes to leaf area index and plot microclimate are insufficient to fully describe the effects of disturbance on transpiration.

The fifth plot of the Carcinogenic Potency Database: results of animal bioassays published in the general literature through 1988 and by the National Toxicology Program through 1989.

PubMed Central

Gold, L S; Manley, N B; Slone, T H; Garfinkel, G B; Rohrbach, L; Ames, B N

1993-01-01

This paper is the fifth plot of the Carcinogenic Potency Database (CPDB) that first appeared in this journal in 1984 (1-5). We report here results of carcinogenesis bioassays published in the general literature between January 1987 and December 1988, and in technical reports of the National Toxicology Program between July 1987 and December 1989. This supplement includes results of 412 long-term, chronic experiments of 147 test compounds and reports the same information about each experiment in the same plot format as the earlier papers: the species and strain of test animal, the route and duration of compound administration, dose level and other aspects of experimental protocol, histopathology and tumor incidence, TD50 (carcinogenic potency) and its statistical significance, dose response, author's opinion about carcinogenicity, and literature citation. We refer the reader to the 1984 publications (1,5,6) for a guide to the plot of the database, a complete description of the numerical index of carcinogenic potency, and a discussion of the sources of data, the rationale for the inclusion of particular experiments and particular target sites, and the conventions adopted in summarizing the literature. The five plots of the database are to be used together, as results of individual experiments that were published earlier are not repeated. In all, the five plots include results of 4487 experiments on 1136 chemicals. Several analyses based on the CPDB that were published earlier are described briefly, and updated results based on all five plots are given for the following earlier analyses: the most potent TD50 value by species, reproducibility of bioassay results, positivity rates, and prediction between species.(ABSTRACT TRUNCATED AT 250 WORDS) PMID:8354183

Third chronological supplement to the carcinogenic potency database: standardized results of animal bioassays published through December 1986 and by the National Toxicology Program through June 1987.

PubMed Central

Gold, L S; Slone, T H; Backman, G M; Eisenberg, S; Da Costa, M; Wong, M; Manley, N B; Rohrbach, L; Ames, B N

1990-01-01

This paper is the third chronological supplement to the Carcinogenic Potency Database that first appeared in this journal in 1984. We report here results of carcinogenesis bioassays published in the general literature between January 1985 and December 1986, and in Technical Reports of the National Toxicology Program between June 1986 and June 1987. This supplement includes results of 337 long-term, chronic experiments of 121 compounds, and reports the same information about each experiment in the same plot format as the earlier papers, e.g., the species and strain of animal, the route and duration of compound administration, dose level, and other aspects of experimental protocol, histopathology, and tumor incidence, TD50 (carcinogenic potency) and its statistical significance, dose response, opinion of the author about carcinogenicity, and literature citation. The reader needs to refer to the 1984 publication for a guide to the plot of the database, a complete description of the numerical index of carcinogenic potency, and a discussion of the sources of data, the rationale for the inclusion of particular experiments and particular target sites, and the conventions adopted in summarizing the literature. The four plots of the database are to be used together as results published earlier are not repeated. In all, the four plots include results for approximately 4000 experiments on 1050 chemicals. Appendix 14 of this paper is an alphabetical index to all chemicals in the database and indicates which plot(s) each chemical appears in. A combined plot of all results from the four separate papers, that is ordered alphabetically by chemical, is available from the first author, in printed form or on computer tape or diskette. PMID:2351123

Comparison of Rain-Fast Bait Stations Versus Foliar Bait Sprays for Control of Oriental Fruit Fly, Bactrocera dorsalis, in Papaya Orchards in Hawaii

PubMed Central

Piñero, Jaime C.; Mau, Ronald F. L.; Vargas, Roger I.

2010-01-01

Bait stations represent an environmentally friendly attract-and-kill approach to fruit fly population suppression. Recently a novel, visually attractive, rain-fast bait station was developed in Hawaii for potential use against multiple species of pestiferous fruit flies. Here, we compared the efficacy of GF-120 NF Naturalyte Fruit Fly Bait applied either as foliar sprays or onto bait stations in reducing female oriental fruit fly, Bactrocera dorsalis (Hendel) (Diptera: Tephritidae), population density and level of fruit infestation in commercial papaya orchards in Hawaii. Trapping and infestation data were used as indicators of the effectiveness of the two bait application methods. For the first 10 weeks of the study, captures of female B. dorsalis in monitoring traps were significantly greater in control plots than in plots treated with foliar sprays or bait stations. Six weeks after the first bait spray, incidence of infestation (i.e. number of fruit with one or more B. dorsalis larvae) of quarter to half-ripe papaya fruit was reduced by 71.4% and 63.1% for plots with bait stations and foliar sprays, respectively, as compared to control plots. Twelve weeks after first spray, incidence of infestation was reduced by only 54.5% and 45.4% for plots with bait stations and foliar sprays, respectively, as compared to control plots. About 42% less GF-120 was used in orchard plots with bait stations compared to those subject to foliar sprays. The impact of field sanitation on the outcome is also discussed. The results indicate that bait stations can provide a simple, efficient, and economical method of applying insecticidal baits to control fruit flies and a safer alternative to foliar sprays. PMID:21067423

Toxicopathological Effects of the Sunscreen UV Filter, Oxybenzone (Benzophenone-3), on Coral Planulae and Cultured Primary Cells and Its Environmental Contamination in Hawaii and the U.S. Virgin Islands.

PubMed

Downs, C A; Kramarsky-Winter, Esti; Segal, Roee; Fauth, John; Knutson, Sean; Bronstein, Omri; Ciner, Frederic R; Jeger, Rina; Lichtenfeld, Yona; Woodley, Cheryl M; Pennington, Paul; Cadenas, Kelli; Kushmaro, Ariel; Loya, Yossi

2016-02-01

Toxicity persistence to the nontarget amphipod Hyalella curvispina in runoff events following chlorpyrifos applications to soy experimental plots was compared in conventional and no-till management. Two application scenarios were compared: an early-season application with the soil almost bare and a late-season application after the foliage had attained complete soil cover. H. curvispina was exposed to chlorpyrifos using two different test systems: a short-term (48 h) runoff water exposure and a long-term (10 days) soil exposure. Both commonly used crop management practices for soybean production resulted in runoff toxicity following pesticide applications and represent a toxicity risk for adjacent inland waters. Toxicity persistence was longer after the earlier than the late season application, likely because of higher volatilization and photodecomposition losses from the soy canopy than from the soil. For the early-season application, toxicity persisted longer in the no-till plots than in the conventional tillage plots. Suspended matter was higher in the conventional treatment. Chlorpyrifos sorption to suspended matter likely contributed to the shorter persistence. For the late-season application, toxicity persisted longer in the conventional treatment. The causes remain conjectural. The soil organic carbon content was higher in the no-till treatment. Sorption to organic matter might have contributed to the shorter chlorpyrifos toxicity persistence in no-till management. Late applications are more frequent and prevail longer throughout the soy growing season. Overall, the no-till management practice seems preferably because shorter toxicity persistence in runoff represents a lower environmental risk for the adjacent inland waters.

SPRUCE Deep Peat Heating Manipulations: in situ Methods to Characterize the Response of Deep Peat to Warming

NASA Astrophysics Data System (ADS)

Hanson, P. J.; Riggs, J. S.; Barbier, C. N.; Nettles, W. R., IV; Phillips, J. R.; Hook, L.

2014-12-01

Deep soil heating infrastructure was completed in 2014 for a peatland whole-ecosystem warming study that will include air warming starting in 2015 (SPRUCE; http://mnspruce.ornl.gov). In June 2014, we initiated deep soil heating to test the responsiveness of deep peat carbon stocks, microbial communities and biogeochemical cycling processes to heating at 4 warming levels (+2.25, +4.5, +6.75 and +9 °C; 2 replicate plots) compared to fully-constructed control plots (+0 °C; 2 replicate plots). The warming treatments were deployed over eight 113 m2 areas using circular arrays of low-wattage (W) electrical resistance heaters. Perimeter heating was achieved by an exterior circle of 48 100W heaters that apply heat from the surface to a depth of 3 meters. Heating within the study area was accomplished utilizing three zones of 100W "deep only" heaters: an intermediate circle of 12 units, an interior circle of 6 units and one unit placed at the plot center. Heating elements inside the study area apply heat only from -2 to -3 m to keep active heater surfaces away from measured peat volumes. With an average peat depth of 2.5 meters this system was able to warm approximately 113 of the 282 m3 of peat within each target plot. In the absence of the air warming cap, in situ deep peat heating is only effective at sustaining warming in the deep peat layers. Warming levels at depth were achieved over a 25-day (+ 2.25 °C) to a 60-day (+9 °C) period depending on the target treatment temperatures in agreement with a priori energy balance model simulations. Homogeneous temperature distributions between heaters at a given depth interval continued to develop after these targets were reached. Biological and biogeochemical responses to these manipulations are being actively assessed. After one month of transient heating, data for ground-level surface flux of CO2 and CH4 had not shown changes from deep peat heating, but they continue to be tracked and will be summarized in this and related talks.

Effectiveness of odor-baited trap trees for plum curculio (Coleoptera: Curculionidae) monitoring in commercial apple orchards in the northeast.

PubMed

Piñero, Jaime C; Agnello, Arthur M; Tuttle, Arthur; Leskey, Tracy C; Faubert, Heather; Koehler, Glen; Los, Lorraine; Morin, Glenn; Leahy, Kathleen; Cooley, Daniel R; Prokopy, Ronald J

2011-10-01

The plum curculio, Conotrachelus nenuphar (Herbst), is a key pest of pome and stone fruit in eastern and central North America. For effective management of this insect pest in commercial apple (Malus spp.) orchards in the northeastern United States and Canada, one of the greatest challenges has been to determine the need for and timing of insecticide applications that will protect apple fruit from injury by adults. In a 2004-2005 study, we assessed the efficacy and economic viability of a reduced-risk integrated pest management strategy involving an odor-baited trap tree approach to determine need for and timing of insecticide use against plum curculio based on appearance of fresh egg-laying scars. Evaluations took place in commercial apple orchards in seven northeastern U.S. states. More specifically, we compared the trap-tree approach with three calendar-driven whole-block sprays and with heat-unit accumulation models that predict how long insecticide should be applied to orchard trees to prevent injury by plum curculio late in the season. Trap tree plots received a whole-plot insecticide spray by the time of petal fall, and succeeding sprays (if needed) were applied to peripheral-row trees only, depending on a threshold of one fresh plum curculio egg-laying scar out of 25 fruit sampled from a single trap tree. In both years, level of plum curculio injury to fruit sampled from perimeter-row, the most interior-row trees and whole-plot injury in trap tree plots did not differ significantly from that recorded in plots subject to conventional management or in plots managed using the heat-unit accumulation approach. The amount of insecticide used in trap tree plots was reduced at least by 43% compared with plots managed with the conventional approach. Advantages and potential pitfalls of the bio-based trap tree approach to plum curculio monitoring in apple orchards are discussed.

An assessment of the effect of human faeces and urine on maize production and water productivity

NASA Astrophysics Data System (ADS)

Guzha, Edward; Nhapi, Innocent; Rockstrom, Johan

The key challenge facing many catchment authorities in Zimbabwe and elsewhere is the challenge of feeding the growing populations within their catchment boundaries. Modern agricultural practices continue to mine valuable crop nutrients through increased food production to satisfy ever-increasing food demand. In recent diagnostic survey of smallholder agricultural sector in the Manyame catchments of Zimbabwe it was revealed that exhausted soils depleted of their natural mineral and organic constituents by many years of cropping with little fertilization or manuring were the major factors contributing to low yields and poor food security in this sector in Zimbabwe. The objective of the study was to assess the effect of using sanitized human excreta on maize production and water productivity. The study involved six volunteer farmers with four 10 m × 10 m trial plots each with the following treatments the control, commercial fertilizer treatment urine only plot, and the feacal matter and urine plot. Harvest determination was carried by weighing the yield from each of the treatment plots and comparisons done. Water productivity was computed by calculating the amount of water used to produce a tone of maize per ha. The study showed that human excreta improves maize crop production and water productivity in rain-fed agriculture. The study recommends that the ecological sanitation concept and the reuse of human excreta both humanure and (ecofert) urine can be considered as alternative excreta management options in catchment areas.

Challenges in designing appropriate scaffolding to improve students' representational consistency: The case of a Gauss's law problem

NASA Astrophysics Data System (ADS)

Maries, Alexandru; Lin, Shih-Yin; Singh, Chandralekha

2017-12-01

Prior research suggests that introductory physics students have difficulty with graphing and interpreting graphs. Here, we discuss an investigation of student difficulties in translating between mathematical and graphical representations for a problem in electrostatics and the effect of increasing levels of scaffolding on students' representational consistency. Students in calculus-based introductory physics were given a typical problem that can be solved using Gauss's law involving a spherically symmetric charge distribution in which they were asked to write a mathematical expression for the electric field in various regions and then plot the electric field. In study 1, we found that students had great difficulty in plotting the electric field as a function of the distance from the center of the sphere consistent with the mathematical expressions in various regions, and interviews with students suggested possible reasons which may account for this difficulty. Therefore, in study 2, we designed two scaffolding interventions with levels of support which built on each other (i.e., the second scaffolding level built on the first) in order to help students plot their expressions consistently and compared the performance of students provided with scaffolding with a comparison group which was not given any scaffolding support. Analysis of student performance with different levels of scaffolding reveals that scaffolding from an expert perspective beyond a certain level may sometimes hinder student performance and students may not even discern the relevance of the additional support. We provide possible interpretations for these findings based on in-depth, think-aloud student interviews.

Pitfall Traps and Mini-Winkler Extractor as Complementary Methods to Sample Soil Coleoptera.

PubMed

Carneiro, A C; Batistella, D A; Battirola, L D; Marques, M I

2016-02-01

We compared abundance, species richness, and capture efficiency with pitfall traps and mini-Winkler extractors to examine their use as complementary methods for sampling soil Coleoptera during dry (2010) and high water seasons (2011) in three areas, including inundated and non-inundated regions, in the Pantanal of Poconé, Mato Grosso, Brazil. We paired treatments with two 10 × 10 m plots in inundated and non-inundated locations that were repeated three times in each location for a total of 18 plots. In each plot, we used nine pitfall traps and collected 2 m(2) of leaf litter and surface soil samples with mini-Winkler extractors. We collected a total of 4260 adult beetles comprising 36 families, 113 genera, and 505 species. Most were caught in pitfalls (69%) and the remainder in the mini-Winkler extractors (31%). Each method provided distinct information about the beetle community: 252 species were captured only in pitfall traps, 147 using only the mini-Winkler extractors, and these methods shared another 106 species. Pitfall and mini-Winkler contribute in different ways for the sampling of the soil beetle community, and so they should be considered complementary for a more thorough assessment of community diversity.

A premilinary survey of tree species in the habitat of Rafflesia at Sungai Kenau, Raub, Pahang, Malaysia

NASA Astrophysics Data System (ADS)

Juhari, Mohd Afiq Aizat; Adam, Jumaat Haji; Ishak, Siti Amirah

2016-11-01

A study was conducted to determine the floristic composition of the Sungai Kenau, Raub, Pahang. The study area was located in the lowland dipterocarp forest where logging and forest opening were common in Malaysia and the area have a population of Rafflesia. The method used was plotting with size of 100 m ×10 m for each plot. Each plot was then divided into 10 subplots measuring 10 m ×10 m. All trees with diameter at breast height (DBH) of 5 cm and above was measured and recorded. Results showed that there were 623 individual trees in an area of 0.5 hectares which includes 50 families, 98 genera and 140 species. Annonaceae was the most dominant family in the study area, while the dominant species in the entire study area was Saraca cauliflora (Leguminosae). The contribution of this study were the presence of tree species from Macaranga which can be used as biological indicator to detect the presence of an open area in the forest while Saraca cauliflora can also be a biological indicator that indicated the present of riparian areas.

Recovery of tall cotton-grass following real and simulated feeding by snow geese

USGS Publications Warehouse

Hupp, Jerry W.; Robertson, Donna G.; Schmutz, Joel A.

2000-01-01

Lesser snow geese Anser caerulescens caerulescens from the western Canadian Arctic feed on underground parts of tall cotton-grass Eriophorum angustifolium during autumn staging on the coastal plain of the Beaufort Sea in Canada and Alaska. We studied revegetation of sites where cotton-grass had been removed either by human-imprinted snow geese or by hand to simulate snow goose feeding. Aerial cover of cotton-grass at sites (n = 4) exploited by human-imprinted snow geese averaged 60 and 39% lower than in undisturbed control plots during the first and second year after feeding, respectively. Underground biomass of cotton-grass stembases and rhizomes in hand-treated plots was 80 and 62% less than in control plots 2 and 4 yr after removal, respectively (n = 10 yr-1). Aerial cover and biomass of common non-forage species such as Carex aquatilis did not increase on treated areas. Removal of cotton-grass by geese likely reduces forage availability at exploited sites for at least 2-4 yr after feeding but probably does not affect long-term community composition. Temporal heterogeneity in forage abundance likely contributes to the large spatial requirement of snow geese during staging.

Soil Carbon Changes in Transitional Grain Crop Production Systems in South Dakota

NASA Astrophysics Data System (ADS)

Woodard, H. J.

2004-12-01

Corn-C (Zea Mays L.), soybean-S (Glycine max L.) and spring wheat-W (Triticum aestivum L.) crops were seeded as a component of either a C-S, S-W, or C-S-W crop rotation on silt-loam textured soils ranging from 3.0-5.0% organic matter. Conservation tillage(chisel plow-field cultivator) was applied to half of the plots. The other plots were direct seeded as a no-till (zero-tillage) treatment. Grain yield and surface crop residues were weighed from each treatment plot. Crop residue (stover and straw) was removed from half of the plots. After four years, soil samples were removed at various increments of depth and soil organic carbon (C) and nitrogen (N) was measured. The ranking of crop residue weights occurred by the order corn>>soybean>wheat. Surface residue accumulation was also greatest with residue treatments that were returned to the plots, those rotations in which maize was a component, and those without tillage. Mean soil organic carbon levels in the 0-7.5cm depth decreased from 3.41% to 3.19% (- 0.22%) with conventional tillage (chisel plow/field cultivator) as compared to a decrease from 3.19% to 3.05% (-0.14%) in plots without tillage over a four year period. Organic carbon in the 0-7.5cm depth decreased from 3.21% to 3.01% (- 0.20%) after residue removed as compared to a decrease from 3.39% to 3.23% (-0.17%) in plots without tillage applied after four years. The soil C:N ratio (0-7.5cm) decreased from 10.63 to 10.37 (-0.26 (unitless)) in the tilled plots over a four-year period. Soil C:N ratio at the 0-7.5cm depth decreased from 10.72 to 10.04 (-0.68) in the no-till plots over a four year period. Differences in the soil C:N ratio comparing residue removed and residue returned were similar (-0.51 vs. -0.43 respectively). These soils are highly buffered for organic carbon changes. Many cropping cycles are required to determine how soil carbon storage is significantly impacted by production systems.

Bacterial Communities in Malagasy Soils with Differing Levels of Disturbance Affecting Botanical Diversity

PubMed Central

Blasiak, Leah C.; Schmidt, Alex W.; Andriamiarinoro, Honoré; Mulaw, Temesgen; Rasolomampianina, Rado; Applequist, Wendy L.; Birkinshaw, Chris; Rejo-Fienena, Félicitée; Lowry, Porter P.; Schmidt, Thomas M.; Hill, Russell T.

2014-01-01

Madagascar is well-known for the exceptional biodiversity of its macro-flora and fauna, but the biodiversity of Malagasy microbial communities remains relatively unexplored. Understanding patterns of bacterial diversity in soil and their correlations with above-ground botanical diversity could influence conservation planning as well as sampling strategies to maximize access to bacterially derived natural products. We present the first detailed description of Malagasy soil bacterial communities from a targeted 16S rRNA gene survey of greater than 290,000 sequences generated using 454 pyrosequencing. Two sampling plots in each of three forest conservation areas were established to represent different levels of disturbance resulting from human impact through agriculture and selective exploitation of trees, as well as from natural impacts of cyclones. In parallel, we performed an in-depth characterization of the total vascular plant morphospecies richness within each plot. The plots representing different levels of disturbance within each forest did not differ significantly in bacterial diversity or richness. Changes in bacterial community composition were largest between forests rather than between different levels of impact within a forest. The largest difference in bacterial community composition with disturbance was observed at the Vohibe forest conservation area, and this difference was correlated with changes in both vascular plant richness and soil pH. These results provide the first survey of Malagasy soil bacterial diversity and establish a baseline of botanical diversity within important conservation areas. PMID:24465484

Arsenic leaching and speciation in C&D debris landfills and the relationship with gypsum drywall content.

PubMed

Zhang, Jianye; Kim, Hwidong; Dubey, Brajesh; Townsend, Timothy

2017-01-01

The effects of sulfide levels on arsenic leaching and speciation were investigated using leachate generated from laboratory-scale construction and demolition (C&D) debris landfills, which were simulated lysimeters containing various percentages of gypsum drywall. The drywall percentages in lysimeters were 0, 1, 6, and 12.4wt% (weight percent) respectively. With the exception of a control lysimeter that contained 12.4wt% of drywall, each lysimeter contained chromated copper arsenate (CCA) treated wood, which accounts for 10wt% of the C&D waste. During the period of study, lysimeters were mostly under anaerobic conditions. Leachate analysis results showed that sulfide levels increased as the percentage of drywall increased in landfills, but arsenic concentrations in leachate were not linearly correlated with sulfide levels. Instead, the arsenic concentrations decreased as sulfide increased up to approximately 1000μg/L, but had an increase with further increase in sulfide levels, forming a V-shape on the arsenic vs. sulfide plot. The analysis of arsenic speciation in leachate showed different species distribution as sulfide levels changed; the fraction of arsenite (As(III)) increased as the sulfide level increased, and thioarsenate anions (As(V)) were detected when the sulfide level further increased (>10 4 μg/L). The formation of insoluble arsenic sulfide minerals at a lower range of sulfide and soluble thioarsenic anionic species at a higher range of sulfide likely contributed to the decreasing and increasing trend of arsenic leaching. Copyright © 2016. Published by Elsevier Ltd.

Status of the desert tortoise in Red Rock Canyon State Park

USGS Publications Warehouse

Berry, Kristin H.; Keith, Kevin; Bailey, Tracy Y.

2008-01-01

We surveyed for desert tortoises, Gopherus agassizii, in the western part of Red Rock Canyon State Park and watershed in eastern Kern County, California, between 2002 and 2004. We used two techniques: a single demographic plot (~4 km2 ) and 37 landscape plots (1-ha each). We estimated population densities of tortoises to be between 2.7 and 3.57/km2 and the population in the Park to be 108 tortoises. We estimated the death rate at 67% for subadults and adults during the last 4 yrs. Mortality was high for several reasons: gunshot deaths, avian predation, mammalian predation, and probably disease. Historic and recent anthropogenic impacts from State Highway 14, secondary roads, trash, cross-country vehicle tracks, and livestock have contributed to elevated death rates and degradation of habitat. We propose conservation actions to reduce mortality.

Individual Component Map of Rotatory Strength (ICM-RS) and Rotatory Strength Density (RSD) plots as analysis tools of circular dicroism spectra of complex systems.

PubMed

Chang, Le; Baseggio, Oscar; Sementa, Luca; Cheng, Daojian; Fronzoni, Giovanna; Toffoli, Daniele; Aprà, Edoardo; Stener, Mauro; Fortunelli, Alessandro

2018-06-13

We introduce Individual Component Maps of Rotatory Strength (ICM-RS) and Rotatory Strength Density (RSD) plots as analysis tools of chiro-optical linear response spectra deriving from time-dependent density functional theory (TDDFT) simulations. ICM-RS and RSD allow one to visualize the origin of chiro-optical response in momentum or real space, including signed contributions and therefore highlighting cancellation terms that are ubiquitous in chirality phenomena, and should be especially useful in analyzing the spectra of complex systems. As test cases, we use ICM-RS and RSD to analyze circular dichroism spectra of selected (Ag-Au)30(SR)18 monolayer-protected metal nanoclusters, showing the potential of the proposed tools to derive insight and understanding, and eventually rational design, in chiro-optical studies of complex systems.

An integrated WRF/HYSPLIT modeling approach for the assessment of PM(2.5) source regions over the Mississippi Gulf Coast region.

PubMed

Yerramilli, Anjaneyulu; Dodla, Venkata Bhaskar Rao; Challa, Venkata Srinivas; Myles, Latoya; Pendergrass, William R; Vogel, Christoph A; Dasari, Hari Prasad; Tuluri, Francis; Baham, Julius M; Hughes, Robert L; Patrick, Chuck; Young, John H; Swanier, Shelton J; Hardy, Mark G

2012-12-01

Fine particulate matter (PM(2.5)) is majorly formed by precursor gases, such as sulfur dioxide (SO(2)) and nitrogen oxides (NO(x)), which are emitted largely from intense industrial operations and transportation activities. PM(2.5) has been shown to affect respiratory health in humans. Evaluation of source regions and assessment of emission source contributions in the Gulf Coast region of the USA will be useful for the development of PM(2.5) regulatory and mitigation strategies. In the present study, the Hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) model driven by the Weather Research & Forecasting (WRF) model is used to identify the emission source locations and transportation trends. Meteorological observations as well as PM(2.5) sulfate and nitric acid concentrations were collected at two sites during the Mississippi Coastal Atmospheric Dispersion Study, a summer 2009 field experiment along the Mississippi Gulf Coast. Meteorological fields during the campaign were simulated using WRF with three nested domains of 36, 12, and 4 km horizontal resolutions and 43 vertical levels and validated with North American Mesoscale Analysis. The HYSPLIT model was integrated with meteorological fields derived from the WRF model to identify the source locations using backward trajectory analysis. The backward trajectories for a 24-h period were plotted at 1-h intervals starting from two observation locations to identify probable sources. The back trajectories distinctly indicated the sources to be in the direction between south and west, thus to have origin from local Mississippi, neighboring Louisiana state, and Gulf of Mexico. Out of the eight power plants located within the radius of 300 km of the two monitoring sites examined as sources, only Watson, Cajun, and Morrow power plants fall in the path of the derived back trajectories. Forward dispersions patterns computed using HYSPLIT were plotted from each of these source locations using the hourly mean emission concentrations as computed from past annual emission strength data to assess extent of their contribution. An assessment of the relative contributions from the eight sources reveal that only Cajun and Morrow power plants contribute to the observations at the Wiggins Airport to a certain extent while none of the eight power plants contribute to the observations at Harrison Central High School. As these observations represent a moderate event with daily average values of 5-8 μg m(-3) for sulfate and 1-3 μg m(-3) for HNO(3) with differences between the two spatially varied sites, the local sources may also be significant contributors for the observed values of PM(2.5).

Does the increased air humidity affect soil respiration and carbon stocks?

NASA Astrophysics Data System (ADS)

Kukumägi, Mai; Celi, Luisella; Said-Pullicino, Daniel; Kupper, Priit; Sõber, Jaak; Lõhmus, Krista; Kutti, Sander; Ostonen, Ivika

2013-04-01

Climate manipulation experiments at ecosystem-scale enable us to simulate, investigate and predict changes in carbon balance of forest ecosystems. Considering the predicted increase in air humidity and precipitation for northern latitudes, this work aimed at investigating the effect of increased air humidity on soil respiration, distribution of soil organic matter (SOM) among pools having different turnover times, and microbial, fine root and rhizome biomass. The study was carried out in silver birch (Betula pendula Roth.) and hybrid aspen (Populus tremula L. × P. tremuloides Michx.) stands in a Free Air Humidity Manipulation (FAHM) experimental facility containing three humidified (H; on average 7% above current ambient levels since 2008) and three control (C) plots. Soil respiration rates were measured monthly during the growing season using a closed dynamic chamber method. Density fractionation was adopted to separate SOM into two light fractions (free and aggregate-occluded particulate organic matter, fPOM and oPOM respectively), and one heavy fraction (mineral-associated organic matter, MOM). The fine root and rhizome biomass and microbial data are presented for silver birch stands only. In 2011, after 4 growing seasons of humidity manipulation soil organic carbon contents were significantly higher in C plots than H plot (13.5 and 12.5 g C kg-1, respectively), while soil respiration tended to be higher in the latter. Microbial biomass and basal respiration were 13 and 14% higher in H plots than in the C plots, respectively. Twice more fine roots of trees were estimated in H plots, while the total fine root and rhizome biomass (tree + understory) was similar in C and H plots. Fine root turnover was higher for both silver birch and understory roots in H plots. Labile SOM light fractions (fPOM and oPOM) were significantly smaller in H plots with respect to C plots (silver birch and hybrid aspen stands together), whereas no differences were observed in the contents of the more stable MOM. These results strongly suggest that, apart from the predicted increase in temperature and atmospheric carbon and nitrogen concentrations, an increase in free air humidity as a result of climate change may significantly influence the complex belowground carbon cycling by affecting biomass production, soil respiration and organic matter turnover.

Final report: Hydraulic mechanisms of survival and mortality during drought in pinon-juniper woodlands of southwestern USA

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pockman, William

The goal of this project was to use rainfall manipulation of an intact pinon-juniper woodland in central New Mexico to understand the mechanisms that control the response of these species to extremes of rainfall. Experimental plots were installed in a pinon-juniper woodland at the Sevilleta National Wildlife Refuge and treatments were imposed in August 2007. Treatments consisted of 1) a Drought treatment imposed by diverting approximately 45% of precipitation away from the plot, 2) and Irrigation treatment imposed by applying six 19 mm simulated rainfall events at regular intervals during the growing season, 3) a Cover Control treatment designed tomore » assess the impact of the plastic troughs constructed on Drought plots without imposing the rainfall diversion, and 4) an untreated control that received no modification. Extensive pinon mortality was observed beginning one year after the start of drought treatment on hillslope plots, while a third drought plot on deeper soils did not exhibit pinon mortality until the fifth year of drought treatment. Pinon mortality occurred in the context of high levels of bark beetle activity, motivating the installation of two additional plots in 2010: a control plot and a drought plot built to the same standards as the original treatments but with bark beetle control maintained by pesticide application to the bole of target trees from 2010 - 2016. Although the drought treatment created similar conditions to those experienced on hillslope drought plots, the drought plot with bark beetle control exhibited no pinon mortality for 5 years even in the presence of high regional bark beetle activity in 2012/13. One of the goals of the research was to identify the mechanism of drought-induced mortality in pinon and juniper: 1) mortality due to catastrophic failure of water transport through plant tissues (hydraulic failure), 2) mortality due to limitations in carbon uptake (carbon starvation) and 3) either of the first two mechanisms with the involvement of bark beetles and other pathogens. Data from this study implicate the interaction of hydraulic failure and carbon limitations with bark beetles playing a pivotal role in influencing the timing of mortality. The uncommon nature of this kind of large scale manipulative experiment has motivated widespread use of the data from the various treatments in modeling exercises with several collaborative groups.« less

Empathy Variation in General Practice: A Survey among General Practitioners in Denmark

PubMed Central

Ahnfeldt-Mollerup, Peder; Søndergaard, Jens

2018-01-01

Background: Previous studies have demonstrated that high levels of physician empathy may be correlated with improved patient health outcomes and high physician job satisfaction. Knowledge about variation in empathy and related general practitioner (GP) characteristics may allow for a more informed approach to improve empathy among GPs. Objective: Our objective is to measure and analyze variation in physician empathy and its association with GP demographic, professional, and job satisfaction characteristics. Methods: 464 Danish GPs responded to a survey containing the Danish version of the Jefferson Scale of Empathy for Health Professionals (JSE-HP) and questions related to their demographic, professional and job satisfaction characteristics. Descriptive statistics and a quantile plot of the ordered empathy scores were used to describe empathy variation. In addition, random-effect logistic regression analysis was performed to explore the association between empathy levels and the included GP characteristics. Results: Empathy scores were negatively skewed with a mean score of 117.9 and a standard deviation of 10.1 within a range from 99 (p5) to 135 (p95). GPs aged 45–54 years and GPs who are not employed outside of their practice were less likely to have high empathy scores (≥120). Neither gender, nor length of time since specialization, length of time in current practice, practice type, practice location, or job satisfaction was associated with odds of having high physician empathy. However, odds of having a high empathy score were higher for GPs who stated that the physician-patient relationship and interaction with colleagues has a high contribution to job satisfaction compared to the reference groups (low and medium contribution of these factors). This was also the trend for GPs who stated a high contribution to job satisfaction from intellectual stimulation. In contrast, high contribution of economic profit and prestige did not contribute to increased odds of having a high empathy score. Conclusions: Albeit generally high, we observed substantial variation in physician empathy levels among this population of Danish GPs. This variation is positively associated with values of interpersonal relationships and interaction with colleagues, and negatively associated with middle age (45–54 years) and lack of outside employment. There is room to increase GP physician empathy via educational and organizational interventions, and consequently, to improve healthcare quality and outcomes. PMID:29498682

Characterization and source apportionment of organic aerosol at 260 m on a meteorological tower in Beijing, China

NASA Astrophysics Data System (ADS)

Zhou, Wei; Wang, Qingqing; Zhao, Xiujuan; Xu, Weiqi; Chen, Chen; Du, Wei; Zhao, Jian; Canonaco, Francesco; Prévôt, André S. H.; Fu, Pingqing; Wang, Zifa; Worsnop, Douglas R.; Sun, Yele

2018-03-01

Despite extensive efforts toward the characterization of submicron aerosols at ground level in the megacity of Beijing, our understanding of aerosol sources and processes at high altitudes remains low. Here we conducted a 3-month real-time measurement of non-refractory submicron aerosol (NR-PM1) species at a height of 260 m from 10 October 2014 to 18 January 2015 using an aerosol chemical speciation monitor. Our results showed a significant change in aerosol composition from the non-heating period (NHP) to the heating period (HP). Organics and chloride showed clear increases during HP due to coal combustion emissions, while nitrate showed substantial decreases from 28 to 15-18 %. We also found that NR-PM1 species in the heating season can have average mass differences of 30-44 % under similar emission sources yet different meteorological conditions. Multi-linear engine 2 (ME-2) using three primary organic aerosol (OA) factors as constraints, i.e., fossil-fuel-related OA (FFOA) dominantly from coal combustion emissions, cooking OA (COA), and biomass burning OA (BBOA) resolved from ground high-resolution aerosol mass spectrometer measurements, was applied to OA mass spectra of ACSM. Two types of secondary OA (SOA) that were well correlated with nitrate and chloride-CO, respectively, were identified. SOA played a dominant role in OA during all periods at 260 m although the contributions were decreased from 72 % during NHP to 58-64 % during HP. The SOA composition also changed significantly from NHP to HP. While the contribution of oxygenated OA (OOA) was decreased from 56-63 to 32-40 %, less oxidized OOA (LO-OOA) showed a large increase from 9-16 to 24-26 %. COA contributed a considerable fraction of OA at high altitude, and the contribution was relatively similar across different periods (10-13 %). In contrast, FFOA showed a large increase during HP due to the influences of coal combustion emissions. We also observed very different OA composition between ground level and 260 m. Particularly, the contributions of COA and BBOA at the ground site were nearly twice those at 260 m, while SOA at 260 m was ˜ 15-34 % higher than that at ground level. Bivariate polar plots and back-trajectory analysis further illustrated the different source regions of OA factors in different seasons.

Effects of Spontaneous Colonization by Eriophorum vaginatum on Belowground C and N Mobilization and Greenhouse Gas Emissions in a Restored Boreal Peatland

NASA Astrophysics Data System (ADS)

Lazcano, C.; Brummell, M.; Strack, M.

2016-12-01

Peatland restoration aims at recovering the ecological function of these ecosystems as active C sinks by re-establishing Sphagnum-dominated vegetation. In addition, restoration encourages the establishment of naturally occurring vascular plant species from the local seed bank. Whereas these plants could contribute to a substantial short-term increase in C sequestration due to their large biomass accumulation, their impacts on peat biogeochemistry are complex and belowground C and N mobilization could be substantial, leading to increased greenhouse gas emissions. We investigated the effects of cottongrass (Eriophorum vaginatum), a common vascular plant species colonizing extracted peatlands, on porewater dissolved organic C (DOC) and total dissolved N (TDN) as well as CO2, CH4 and N2O fluxes in a cutover boreal bog in Alberta (Canada), restored three years prior to the study. We hypothesized that cottongrass would increase the concentration of DOC and TDN in porewater as well as net N2O and CH4 emission from peat compared to areas of bare peat or moss. We studied porewater chemistry and net gas exchange for CO2, CH4, and N2O, using static chambers, over one growing season (May-September 2015) and we compared between plots containing cottongrass and plots lacking vascular plants. Plots were located along a transect of increasing water table, to discriminate between the effects of cottongrass and the prevailing hydrological conditions on porewater chemistry and gas fluxes. Cottongrass presence had contrasting effects on porewater DOC chemistry depending on wetness of the site, reducing DOC concentration in dry sites but increasing it at wet sites as compared with bare plots. This suggests that DOC mobilization is primarily controlled by hydrological conditions rather than cottongrass presence. However, cottongrass significantly increased CH4 emissions independently of the plot moisture. Cottongrass presence reduced net emission of N2O in the later part of the growing season, with cottongrass plots frequently acting as net consumers in July and August. Porewater TDN was significantly higher under cottongrass at the wettest area of the site than under either bare or cottongrass plots at the drier area, suggesting nitrogen mobilization from peat by an interaction between cottongrass roots and water.

Flight design system level C requirements. Solid rocket booster and external tank impact prediction processors. [space transportation system

NASA Technical Reports Server (NTRS)

Seale, R. H.

1979-01-01

The prediction of the SRB and ET impact areas requires six separate processors. The SRB impact prediction processor computes the impact areas and related trajectory data for each SRB element. Output from this processor is stored on a secure file accessible by the SRB impact plot processor which generates the required plots. Similarly the ET RTLS impact prediction processor and the ET RTLS impact plot processor generates the ET impact footprints for return-to-launch-site (RTLS) profiles. The ET nominal/AOA/ATO impact prediction processor and the ET nominal/AOA/ATO impact plot processor generate the ET impact footprints for non-RTLS profiles. The SRB and ET impact processors compute the size and shape of the impact footprints by tabular lookup in a stored footprint dispersion data base. The location of each footprint is determined by simulating a reference trajectory and computing the reference impact point location. To insure consistency among all flight design system (FDS) users, much input required by these processors will be obtained from the FDS master data base.

The diagnostic plot analysis of artesian aquifers with case studies in Table Mountain Group of South Africa

NASA Astrophysics Data System (ADS)

Sun, Xiaobin; Xu, Yongxin; Lin, Lixiang

2015-05-01

Parameter estimates of artesian aquifers where piezometric head is above ground level are largely made through free-flowing and recovery tests. The straight-line method proposed by Jacob-Lohman is often used for interpretation of flow rate measured at flowing artesian boreholes. However, the approach fails to interpret the free-flowing test data from two artesian boreholes in the fractured-rock aquifer in Table Mountain Group (TMG) of South Africa. The diagnostic plot method using the reciprocal rate derivative is adapted to evaluate the artesian aquifer properties. The variation of the derivative helps not only identify flow regimes and discern the boundary conditions, but also facilitates conceptualization of the aquifer system and selection of an appropriate model for data interpretation later on. Test data from two free-flowing tests conducted in different sites in TMG are analysed using the diagnostic plot method. Based on the results, conceptual models and appropriate approaches are developed to evaluate the aquifer properties. The advantages and limitations of using the diagnostic plot method on free-flowing test data are discussed.

PuffinPlot: A versatile, user-friendly program for paleomagnetic analysis

NASA Astrophysics Data System (ADS)

Lurcock, P. C.; Wilson, G. S.

2012-06-01

PuffinPlot is a user-friendly desktop application for analysis of paleomagnetic data, offering a unique combination of features. It runs on several operating systems, including Windows, Mac OS X, and Linux; supports both discrete and long core data; and facilitates analysis of very weakly magnetic samples. As well as interactive graphical operation, PuffinPlot offers batch analysis for large volumes of data, and a Python scripting interface for programmatic control of its features. Available data displays include demagnetization/intensity, Zijderveld, equal-area (for sample, site, and suite level demagnetization data, and for magnetic susceptibility anisotropy data), a demagnetization data table, and a natural remanent magnetization intensity histogram. Analysis types include principal component analysis, Fisherian statistics, and great-circle path intersections. The results of calculations can be exported as CSV (comma-separated value) files; graphs can be printed, and can also be saved as publication-quality vector files in SVG or PDF format. PuffinPlot is free, and the program, user manual, and fully documented source code may be downloaded from http://code.google.com/p/puffinplot/.

Salinity of the Delaware Estuary

USGS Publications Warehouse

Cohen, Bernard; McCarthy, Leo T.

1962-01-01

The purpose of this investigation was to obtain data on and study the factors affecting the salinity of the Delaware River from Philadelphia, Pa., to the Appoquinimink River, Del. The general chemical quality of water in the estuary is described, including changes in salinity in the river cross section and profile, diurnal and seasonal changes, and the effects of rainfall, sea level, and winds on salinity. Relationships are established of the concentrations of chloride and dissolved solids to specific conductance. In addition to chloride profiles and isochlor plots, time series are plotted for salinity or some quantity representing salinity, fresh-water discharge, mean river level, and mean sea level. The two major variables which appear to have the greatest effect on the salinity of the estuary are the fresh-water flow of the river and sea level. The most favorable combination of these variables for salt-water encroachment occurs from August to early October and the least favorable combination occurs between December and May.

The analysis and kinetic energy balance of an upper-level wind maximum during intense convection

NASA Technical Reports Server (NTRS)

Fuelberg, H. E.; Jedlovec, G. J.

1982-01-01

The purpose of this paper is to analyze the formation and maintenance of the upper-level wind maximum which formed between 1800 and 2100 GMT, April 10, 1979, during the AVE-SESAME I period, when intense storms and tornadoes were experienced (the Red River Valley tornado outbreak). Radiosonde stations participating in AVE-SESAME I are plotted (centered on Oklahoma). National Meteorological Center radar summaries near the times of maximum convective activity are mapped, and height and isotach plots are given, where the formation of an upper-level wind maximum over Oklahoma is the most significant feature at 300 mb. The energy balance of the storm region is seen to change dramatically as the wind maximum forms. During much of its lifetime, the upper-level wind maximum is maintained by ageostrophic flow that produces cross-contour generation of kinetic energy and by the upward transport of midtropospheric energy. Two possible mechanisms for the ageostrophic flow are considered.

Phytosociology of vascular plants on an international biosphere reserve: Virgin Islands National Park, St. John, US Virgin Islands

Treesearch

Sonja N. Oswalt; Thomas J. Brandies; Britta P. Dimick

2006-01-01

We investigated the relationships of vegetation communities to environmental variables and compared the relative contribution of native and introduced species in extant forest communities on St. John, US Virgin Islands, using an island-wide forest vegetation inventory and monitoring network of permanent plots. We detected 2,415 individuals of 203 species, 5 percent of...

Phytosociology of Vascular Plants on an International Biosphere Reserve: Virgin Islands National Park, St. John, US Virgin Islands.

Treesearch

Sonja N. Oswalt; Thomas J. Brandeis; Britta P. Dimick

2006-01-01

We investigated the relationships of vegetation communities to environmental variables and compared the relative contribution of native and introduced species in extant forest communities on St. John, US Virgin Islands, using an island-wide forest vegetation inventory and monitoring network of permanent plots. We detected 2,415 individuals of 203 species, 5 percent of...

Contribution of river floods, hurricanes, and cold fronts to elevation change in a deltaic floodplain, northern Gulf of Mexico, USA

NASA Astrophysics Data System (ADS)

Bevington, Azure E.; Twilley, Robert R.; Sasser, Charles E.; Holm, Guerry O.

2017-05-01

Deltas are globally important locations of diverse ecosystems, human settlement, and economic activity that are threatened by reductions in sediment delivery, accelerated sea level rise, and subsidence. Here we investigated the relative contribution of river flooding, hurricanes, and cold fronts on elevation change in the prograding Wax Lake Delta (WLD). Sediment surface elevation was measured across 87 plots, eight times from February 2008 to August 2011. The high peak discharge river floods in 2008 and 2011 resulted in the greatest mean net elevation gain of 5.4 to 4.9 cm over each flood season, respectively. The highest deltaic wetland sediment retention (13.5% of total sediment discharge) occurred during the 2008 river flood despite lower total and peak discharge compared to 2011. Hurricanes Gustav and Ike resulted in a total net elevation gain of 1.2 cm, but the long-term contribution of hurricane derived sediments to deltaic wetlands was estimated to be just 22% of the long-term contribution of large river floods. Winter cold front passage resulted in a net loss in elevation that is equal to the elevation gain from lower discharge river floods and was consistent across years. This amount of annual loss in elevation from cold fronts could effectively negate the long-term land building capacity within the delta without the added elevation gain from both high and low discharge river floods. The current lack of inclusion of cold front elevation loss in most predictive numerical models likely overestimates the land building capacity in areas that experience similar forcings to WLD.

Patterns and dynamics of Cs-137 soil contamination on the plot scale of the Bryansk Region (Russia): the role of processes, connectivity

NASA Astrophysics Data System (ADS)

Linnik, Vitaly; Sokolov, Alexander; Saveliev, Anatoly

2014-05-01

Character of surface and subsurface water flow was studied using 137Cs as a marker on a forest plot with a size of 50x70 m in the western part of the Bryansk Region, situated in the lower part of a slope that has a southern exposition and is drained by a stream. The range of altitudinal levels of plot amounts to 152,68-154,68 m. The plot was surveyed with a terrain contour level equalling to 20 sm. The data of the survey were used to make a digital elevation model (DEM). The plot has a undulated relief with a general surface slope in southern and southeast directions, with some depressions ranging from dozens of centimeters to several meters and 20-40 cm deep, in which groundwater comes up straight to the surface in spring. 137Cs distribution was investigated using field radiometry survey by different steps: 10m for the total plot, and 2 m for the two local plots with the size of 10x10 m, and 0,5 m step for a subplot with the size of 3x4 m. The total quantity of measuring points was more than 200. For the total plot 137Cs mean value was 950 kBq/m2, min - 463 kBq/m2 and max- 1706 kBq/m2. Local plot in the depression, was characterized by the following levels of the 137Cs pollution: mean, max and min value accordingly were equal 682, 1280, 281 kBq/m2. At the initial period of the accident at the Chernobyl NPP (April-May 1986) the quantity of 137Cs water soluble form could reach 50%, therefore 137Cs could have been carried out because of a surface and subsurface water flow. The dependence of 137Cs distribution on microrelief has been examined. Values of Laplace operator obtained for a detailed (step of 0,1 m, Laplace1) and a generalized grid (step 0,25 m, Laplace2), as well as altitude were regarded as parameters which control 137Cs redistribution. Negative Laplacian corresponds to wash-out zones (convex microrelief) while positive Laplacian corresponds to accumulation zones (concave microrelief). To determine the relation of 137Cs distribution to the mentioned relief parameters, general additive models were used. According to results of modeling using a detailed and a generalized grid it has been found (Linnik, Saveliev et.al., 2007), that in accumulation zones (depressions) 137Cs deposit was lower when Laplace operator was positive (Laplace1>0=915 kBq/m2; Laplace2>0=921 kBq/m2) than in wash-out zones, singled out by negative values of Laplace operator (Laplace1<0=978 kBq/m2; Laplace2<0=979 kBq/m2). The inversion effect revealed in 137Cs deposit distribution could not be accounted for be processes of surface 137Cs wash-off as the chain of depressions was isolated. We found that connectivity of subsurface moving soil moisture saturation was made up by a number of small and shallow channels, covered by litter, they served as 137Cs travel paths at the period of spring wetting in April-May 1986. The total 137Cs output in soluble form from this plot calculated for the two models was 5,9% and 6,4%. References: Linnik V.G., Saveliev A.A., Govorun A.P., Ivanitsky O.M., Sokolov A.V. Spatial Variability and Topographic Factors of 137Cs Soil Contamination at a Field Scale// International Journal of Ecology & Development, 2007, Vol. 8, No.7, p.8-25.

Stemflow variation in Mexico's northeastern forest communities: Its contribution to soil moisture content and aquifer recharge

NASA Astrophysics Data System (ADS)

Návar, José

2011-09-01

SummaryStemflow hydro-ecological importance was measured in trees and assessed in Mexico's northeast forest stands by answering three basic questions: (a) what are the intra and inter-specific stemflow variations; (b) is the stemflow coefficient constant from tree level to stand scales? and (c) what is the stemflow area and wetted soil volume in individual trees and the stemflow volume discharged at the stand scale in two plant communities of northeastern Mexico? Gross rainfall and stemflow flux measurements were conducted on 78 trees of semi-arid, sub-tropical (31 Diospyros texana; 14 Acacia rigidula; four Bumelia celastrina; five Condalia hookeri; three Cordia bioissieri; three Pithecellobium pallens) and temperate forest communities (six Pinus pseudostrobus Lindl. and 12 Quercus spp.). Stemflow was extrapolated from individual trees to the stand scale using 98 inventory plots (1600 m 2 ha -1 each) placed in oak-pine forests and 37 quadrats (5 m × 5 m each) distributed across the Tamaulipan thornscrub forest range. Stemflow infiltration flux and infiltration area measurements assessed the wetted soil volume. Daily measurements were conducted from May of 1997 to November of 1998. Results showed that stemflow coefficients varied between plant communities since they averaged (confidence intervals, α = 0.05) 2.49% (0.57), 0.30% (0.09), and 0.77% (0.27) of the bulk precipitation for Tamaulipan thornscrub, pine, and oak forests, respectively. Intra-specific stemflow variations could not be identified in Tamaulipan although in temperate tree species. Basal diameter explained intra-specific stemflow variation in both plant communities. Stemflow increased threefold since it accounted for by 6.38% and 2.19% of the total bulk rainfall for Tamaulipan thornscrub quadrats and temperate oak-pine inventory plots, respectively. Small shrubs growing underneath large trees, in combination with the presence of small-diameter trees that recorded the largest stemflow coefficients appear to explain the increase of the stemflow coefficient from trees to stands. Stemflow replenishes soil moisture on the average 4.5 (1.4) times larger than does incident rainfall in open soils and appear to contribute to aquifer recharge in temperate forests due to a combination of shallow soils, high infiltration fluxes and the stemflow volume generated during rainfalls with depths >15 mm. Tracing studies should be conducted to test the hypothesis of the stemflow contribution to aquifer recharge in temperate forests of northeastern Mexico.

The QDP/PLT user's guide

NASA Technical Reports Server (NTRS)

Tennant, Allyn F.

1991-01-01

PLT is a high level plotting package. A Programmer can create a default plot suited for the data being displayed. At run times, users can then interact with the plot overriding any or all of these defaults. The user is also provided the capability to fit functions to the displayed data. This ability to display, interact with, and to fit the data make PLT a useful tool in the analysis of data. The Quick and Dandy Plotter (QDP) program will read ASCII text files that contain PLT commands and data. Thus, QDP provides and easy way to use the PLT software QPD files provide a convenient way to exchange data. The QPD/PLT software is written in standard FORTRAN 77 and has been ported to VAX VMS, SUN UNIX, IBM AIX, NeXT NextStep, and MS-DOS systems.

Research study on neutral thermodynamic atmospheric model. [for space shuttle mission and abort trajectory

NASA Technical Reports Server (NTRS)

Hargraves, W. R.; Delulio, E. B.; Justus, C. G.

1977-01-01

The Global Reference Atmospheric Model is used along with the revised perturbation statistics to evaluate and computer graph various atmospheric statistics along a space shuttle reference mission and abort trajectory. The trajectory plots are height vs. ground range, with height from ground level to 155 km and ground range along the reentry trajectory. Cross sectional plots, height vs. latitude or longitude, are also generated for 80 deg longitude, with heights from 30 km to 90 km and latitude from -90 deg to +90 deg, and for 45 deg latitude, with heights from 30 km to 90 km and longitudes from 180 deg E to 180 deg W. The variables plotted are monthly average pressure, density, temperature, wind components, and wind speed and standard deviations and 99th inter-percentile range for each of these variables.

Quantifying small-scale spatio-temporal variability of snow stratigraphy in forests based on high-resolution snow penetrometry

NASA Astrophysics Data System (ADS)

Teich, M.; Hagenmuller, P.; Bebi, P.; Jenkins, M. J.; Giunta, A. D.; Schneebeli, M.

2017-12-01

Snow stratigraphy, the characteristic layering within a seasonal snowpack, has important implications for snow remote sensing, hydrology and avalanches. Forests modify snowpack properties through interception, wind speed reduction, and changes to the energy balance. The lack of snowpack observations in forests limits our ability to understand the evolution of snow stratigraphy and its spatio-temporal variability as a function of forest structure and to observe snowpack response to changes in forest cover. We examined the snowpack under canopies of a spruce forest in the central Rocky Mountains, USA, using the SnowMicroPen (SMP), a high resolution digital penetrometer. Weekly-repeated penetration force measurements were recorded along 10 m transects every 0.3 m in winter 2015 and bi-weekly along 20 m transects every 0.5 m in 2016 in three study plots beneath canopies of undisturbed, bark beetle-disturbed and harvested forest stands, and an open meadow. To disentangle information about layer hardness and depth variabilities, and to quantitatively compare the different SMP profiles, we applied a matching algorithm to our dataset, which combines several profiles by automatically adjusting their layer thicknesses. We linked spatial and temporal variabilities of penetration force and depth, and thus snow stratigraphy to forest and meteorological conditions. Throughout the season, snow stratigraphy was more heterogeneous in undisturbed but also beneath bark beetle-disturbed forests. In contrast, and despite remaining small diameter trees and woody debris, snow stratigraphy was rather homogenous at the harvested plot. As expected, layering at the non-forested plot varied only slightly over the small spatial extent sampled. At the open and harvested plots, persistent crusts and ice lenses were clearly present in the snowpack, while such hard layers barely occurred beneath undisturbed and disturbed canopies. Due to settling, hardness significantly increased with depth at open and harvested plots, which was less distinctive at the other two plots. Our results contribute to the general understanding of forest-snowpack interactions and, if combined with density and specific surface area estimates, can be used to validate snowpack and microwave models for avalanche formation and SWE retrieval in forests.

Unfavorable regions in the ramachandran plot: Is it really steric hindrance? The interacting quantum atoms perspective

PubMed Central

Maxwell, Peter I.

2017-01-01

Accurate description of the intrinsic preferences of amino acids is important to consider when developing a biomolecular force field. In this study, we use a modern energy partitioning approach called Interacting Quantum Atoms to inspect the cause of the φ and ψ torsional preferences of three dipeptides (Gly, Val, and Ile). Repeating energy trends at each of the molecular, functional group, and atomic levels are observed across both (1) the three amino acids and (2) the φ/ψ scans in Ramachandran plots. At the molecular level, it is surprisingly electrostatic destabilization that causes the high‐energy regions in the Ramachandran plot, not molecular steric hindrance (related to the intra‐atomic energy). At the functional group and atomic levels, the importance of key peptide atoms (Oi –1, Ci, Ni, Ni +1) and some sidechain hydrogen atoms (Hγ) are identified as responsible for the destabilization seen in the energetically disfavored Ramachandran regions. Consistently, the Oi –1 atoms are particularly important for the explanation of dipeptide intrinsic behavior, where electrostatic and steric destabilization unusually complement one another. The findings suggest that, at least for these dipeptides, it is the peptide group atoms that dominate the intrinsic behavior, more so than the sidechain atoms. © 2017 The Authors. Journal of Computational Chemistry Published by Wiley Periodicals, Inc. PMID:28841241

Grounding a natural background level for fluoride in a potentially contaminated crystalline aquifer in south India.

PubMed

Sajil Kumar, P J

2017-12-01

Fluoride contamination is one of the most alarming issues for those countries that depend on groundwater drinking water supply. A careful examination of the hydrogeochemical conditions and routine monitoring of fluoride level are therefore quintessential. Estimation of natural background level (NBL) of fluoride becomes significant information for assessing the current and future contamination episodes. Vellore District in Tamil Nadu is a hard rock terrain known for its F-rich groundwater. In this study, we attempted to form a benchmark for fluoride using hydrochemical pre-selection (based on TDS and NO 3 ) and cumulative probability plots (CPP). Principle components analysis is (PCA) applied to evaluate the corresponding factor grouping of the total of 68 samples, which is later mapped using geostatistical tool in ArcGIS. From the CPP, we derived the NBL of F as 0.75 mg/L. This value is compared with the observed concentration in each sample and they were spatially plotted based on the NBL. Resultant plot suggests that W-NW part of the study area has exceeded and E-EW regions are below the NBL of F. Spatial variation of the factor scores also supported this observation. Grounding an NBL and extending it to other parts of the potential contaminated aquifers are highly recommended for better understanding and management of the water supply systems.

Optimization of Paclitaxel Containing pH-Sensitive Liposomes By 3 Factor, 3 Level Box-Behnken Design.

PubMed

Rane, Smita; Prabhakar, Bala

2013-07-01

The aim of this study was to investigate the combined influence of 3 independent variables in the preparation of paclitaxel containing pH-sensitive liposomes. A 3 factor, 3 levels Box-Behnken design was used to derive a second order polynomial equation and construct contour plots to predict responses. The independent variables selected were molar ratio phosphatidylcholine:diolylphosphatidylethanolamine (X1), molar concentration of cholesterylhemisuccinate (X2), and amount of drug (X3). Fifteen batches were prepared by thin film hydration method and evaluated for percent drug entrapment, vesicle size, and pH sensitivity. The transformed values of the independent variables and the percent drug entrapment were subjected to multiple regression to establish full model second order polynomial equation. F was calculated to confirm the omission of insignificant terms from the full model equation to derive a reduced model polynomial equation to predict the dependent variables. Contour plots were constructed to show the effects of X1, X2, and X3 on the percent drug entrapment. A model was validated for accurate prediction of the percent drug entrapment by performing checkpoint analysis. The computer optimization process and contour plots predicted the levels of independent variables X1, X2, and X3 (0.99, -0.06, 0, respectively), for maximized response of percent drug entrapment with constraints on vesicle size and pH sensitivity.

Monitoring landscape level processes using remote sensing of large plots

Treesearch

Raymond L. Czaplewski

1991-01-01

Global and regional assessaents require timely information on landscape level status (e.g., areal extent of different ecosystems) and processes (e.g., changes in land use and land cover). To measure and understand these processes at the regional level, and model their impacts, remote sensing is often necessary. However, processing massive volumes of remotely sensing...

Correlation signatures of wet soils and snows. [algorithm development and computer programming

NASA Technical Reports Server (NTRS)

Phillips, M. R.

1972-01-01

Interpretation, analysis, and development of algorithms have provided the necessary computational programming tools for soil data processing, data handling and analysis. Algorithms that have been developed thus far, are adequate and have been proven successful for several preliminary and fundamental applications such as software interfacing capabilities, probability distributions, grey level print plotting, contour plotting, isometric data displays, joint probability distributions, boundary mapping, channel registration and ground scene classification. A description of an Earth Resources Flight Data Processor, (ERFDP), which handles and processes earth resources data under a users control is provided.

Throw Away Your Mathematical Handbook! Undergraduate Physics with Wolfram|Alpha, a FREE(!) Internet-Based Mathematical Engine

NASA Astrophysics Data System (ADS)

Looney, Craig W.

2009-10-01

Wolfram|Alpha (http://www.wolframalpha.com/), a free internet-based mathematical engine released earlier this year, represents an orders-of magnitude advance in mathematical power freely available - without money, passwords, or downloads - on the web. Wolfram|Alpha is based on Mathematica, so it can plot functions, take derivatives, solve systems of equations, perform symbolic and numerical integration, and more. These capabilities (especially plotting and integration) will be explored in the context of topics covered in upper level undergraduate physics courses.

From research plots to prototype biomass plantations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kenney, W.A.; Vanstone, B.J.; Gambles, R.L.

1993-12-31

The development of biomass energy plantations is now expanding from the research plot phase into the next level of development at larger scale plantings. This is necessary to provide: more accurate information on biomass yields, realistic production cost figures, venues to test harvesting equipment, demonstration sites for potential producers, and a supply of feedstock for prototype conversion facilities. The paper will discuss some of these objectives and some of the challenges encountered in the scale-up process associated with a willow prototype plantation project currently under development in Eastern Canada.

An improved multiple linear regression and data analysis computer program package

NASA Technical Reports Server (NTRS)

Sidik, S. M.

1972-01-01

NEWRAP, an improved version of a previous multiple linear regression program called RAPIER, CREDUC, and CRSPLT, allows for a complete regression analysis including cross plots of the independent and dependent variables, correlation coefficients, regression coefficients, analysis of variance tables, t-statistics and their probability levels, rejection of independent variables, plots of residuals against the independent and dependent variables, and a canonical reduction of quadratic response functions useful in optimum seeking experimentation. A major improvement over RAPIER is that all regression calculations are done in double precision arithmetic.

Evaluation of a reproductive index to estimate grasshopper sparrow and eastern meadowlark reproductive success

USGS Publications Warehouse

Althoff, Donald P.; Gipson, P.S.; Pontius, J.S.; Japuntich, R.D.

2009-01-01

We compared an index of reproductive success based on breeding behavior to actual nest fates of grasshopper sparrows (Ammodramus savannarum) and eastern meadowlarks (Sturnella magna) on 12 plots (4-ha). Concordance of results between the two methods was 58% for grasshopper sparrows and 42% for eastern meadowlarks on a plot-by-plot basis. The indirect method yielded higher estimates of reproductive activity than nest monitoring for the balance of the plots,. There was little evidence that brown-headed cowbird (Molothrus ater) parasitism influenced the estimates of reproductive success using the indirect method. We concluded that nests and about-to-fledge nestlings were missed during searches on some plots. It may be appropriate to use an indirect method to more efficiently survey territories and/or plots for species with hard-to-find nests or when monitoring large areas. Use of a reproductive index may be appropriate and more time-efficient than nest searching and monitoring for comparing management effects such as burning, grazing, haying, military training, and other localized disturbances that are likely to affect reproductive success of grasshopper sparrows and eastern meadowlarks. However, nest monitoring may be necessary for more precise estimates of productivity necessary for long-term monitoring. Nest monitoring results are also likely to allow for direct comparisons to results from other studies because the index method requires intimate knowledge of the species being evaluated - a factor that could lead to reduced precision because the experience level of technicians relying only on behavioral cues from study-to-study is likely to vary considerably.

Mechanisms of nitrogen heterocycle influence on turbine fuel stability

NASA Technical Reports Server (NTRS)

Daniel, S. R.; Worstell, J. H.

1980-01-01

Lewis bases were extracted from a Utah COED syncrude via ligand exchange. Addition of this extract to Jet A at levels as low as 5 ppm N produced deterioration of stability in both JFTOT and accelerated storage tests (7 days at 394 K with 13:1air to fuel ratio). Comparable effects on Jet A stability were obtained by addition of pyridine and quinoline, while pyrrole and indole were less detrimental at the same concentration level. The weight of deposit produced accelerated storage tests was found to be proportional to the concentration of added nitrogen compound. Over the narrow temperature range accessible with the experimental method, Arrhenius plots obtained by assuming specific rate to be proportional to the weight of material deposited in seven days exhibit greater slopes in the presence of those nitrogen compounds producing the greater deposition rates. It is shown that despite variation in appearance the elemental composition and spectral characteristics of the deposits are unaffected by addition of the nitrogen compounds. The linearity of the Arrhenius plots and of a plot of Arrhenius slope versus intercept for all the compounds suggests a constancy of mechanism over the range of temperature and heterocycles studied.

Sedum-dominated green-roofs in a semi-arid region increase CO2 concentrations during the dry season.

PubMed

Agra, Har'el; Klein, Tamir; Vasl, Amiel; Shalom, Hadar; Kadas, Gyongyver; Blaustein, Leon

2017-04-15

Green roofs are expected to absorb and store carbon in plants and soils and thereby reduce the high CO 2 concentration levels in big cities. Sedum species, which are succulent perennials, are commonly used in extensive green roofs due to their shallow root system and ability to withstand long water deficiencies. Here we examined CO 2 fixation and emission rates for Mediterranean Sedum sediforme on green-roof experimental plots. During late winter to early spring, we monitored CO 2 concentrations inside transparent tents placed over 1m 2 plots and followed gas exchange at the leaf level using a portable gas-exchange system. We found high rates of CO 2 emission at daytime, which is when CO 2 concentration in the city is the highest. Both plot- and leaf-scale measurements showed that these CO 2 emissions were not fully compensated by the nighttime uptake. We conclude that although carbon sequestration may only be a secondary benefit of green roofs, for improving this ecosystem service, other plant species than Sedum should also be considered for use in green roofs, especially in Mediterranean and other semi-arid climates. Copyright © 2017 Elsevier B.V. All rights reserved.

Micromechanics Analysis Code Post-Processing (MACPOST) User Guide. 1.0

NASA Technical Reports Server (NTRS)

Goldberg, Robert K.; Comiskey, Michele D.; Bednarcyk, Brett A.

1999-01-01

As advanced composite materials have gained wider usage. the need for analytical models and computer codes to predict the thermomechanical deformation response of these materials has increased significantly. Recently, a micromechanics technique called the generalized method of cells (GMC) has been developed, which has the capability to fulfill this -oal. Tc provide a framework for GMC, the Micromechanics Analysis Code with Generalized Method of Cells (MAC/GMC) has been developed. As MAC/GMC has been updated, significant improvements have been made to the post-processing capabilities of the code. Through the MACPOST program, which operates directly within the MSC/PATRAN graphical pre- and post-processing package, a direct link between the analysis capabilities of MAC/GMC and the post-processing capabilities of MSC/PATRAN has been established. MACPOST has simplified the production, printing. and exportation of results for unit cells analyzed by MAC/GMC. MACPOST allows different micro-level quantities to be plotted quickly and easily in contour plots. In addition, meaningful data for X-Y plots can be examined. MACPOST thus serves as an important analysis and visualization tool for the macro- and micro-level data generated by MAC/GMC. This report serves as the user's manual for the MACPOST program.

Effects of acidic deposition and soil acidification on sugar maple trees in the Adirondack Mountains, New York

USGS Publications Warehouse

Sullivan, Timothy J.; Lawrence, Gregory B.; Bailey, Scott W.; McDonnell, Todd C.; McPherson, G.T.

2013-01-01

This study documents the effects of acidic deposition and soil acid-base chemistry on the growth, regeneration, and canopy condition of sugar maple (SM) trees in the Adirondack Mountains of New York. Sugar maple is the dominant canopy species throughout much of the northern hardwood forest in the State. A field study was conducted in 2009 in which 50 study plots within 20 small Adirondack watersheds were sampled and evaluated for soil acid-base chemistry and SM growth, canopy condition, and regeneration. Atmospheric sulfur (S) and nitrogen (N) deposition were estimated for each plot. Trees growing on soils with poor acid-base chemistry (low exchangeable calcium and % base saturation) that receive relatively high levels of atmospheric S and N deposition exhibited little to no SM seedling regeneration, decreased canopy condition, and short-to long-term growth declines compared with study plots having better soil condition and lower levels of atmospheric deposition. These results suggest that the ecosystem services provided by SM in the western and central Adirondack Mountain region, including aesthetic, cultural, and monetary values, are at risk from ongoing soil acidification caused in large part by acidic deposition.

Isotope partitioning of soil respiration: A Bayesian solution to accommodate multiple sources of variability

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ogle, Kiona; Pendall, Elise

Isotopic methods offer great potential for partitioning trace gas fluxes such as soil respiration into their different source contributions. Traditional partitioning methods face challenges due to variability introduced by different measurement methods, fractionation effects, and end-member uncertainty. To address these challenges, we describe in this paper a hierarchical Bayesian (HB) approach for isotopic partitioning of soil respiration that directly accommodates such variability. We apply our HB method to data from an experiment conducted in a shortgrass steppe ecosystem, where decomposition was previously shown to be stimulated by elevated CO 2. Our approach simultaneously fits Keeling plot (KP) models to observationsmore » of soil or soil-respired δ 13C and [CO 2] obtained via chambers and gas wells, corrects the KP intercepts for apparent fractionation (Δ) due to isotope-specific diffusion rates and/or method artifacts, estimates method- and treatment-specific values for Δ, propagates end-member uncertainty, and calculates proportional contributions from two distinct respiration sources (“old” and “new” carbon). The chamber KP intercepts were estimated with greater confidence than the well intercepts and compared to the theoretical value of 4.4‰, our results suggest that Δ varies between 2 and 5.2‰ depending on method (chambers versus wells) and CO 2 treatment. Because elevated CO 2 plots were fumigated with 13C-depleted CO 2, the source contributions were tightly constrained, and new C accounted for 64% (range = 55–73%) of soil respiration. The contributions were less constrained for the ambient CO 2 treatments, but new C accounted for significantly less (47%, range = 15–82%) of soil respiration. Finally, our new HB partitioning approach contrasts our original analysis (higher contribution of old C under elevated CO 2) because it uses additional data sources, accounts for end-member bias, and estimates apparent fractionation effects.« less

Emulating natural disturbances for declining late-successional species: a case study of the consequences for cerulean warblers (Setophaga cerulea).

PubMed

Boves, Than J; Buehler, David A; Sheehan, James; Wood, Petra Bohall; Rodewald, Amanda D; Larkin, Jeffrey L; Keyser, Patrick D; Newell, Felicity L; George, Gregory A; Bakermans, Marja H; Evans, Andrea; Beachy, Tiffany A; McDermott, Molly E; Perkins, Kelly A; White, Matthew; Wigley, T Bently

2013-01-01

Forest cover in the eastern United States has increased over the past century and while some late-successional species have benefited from this process as expected, others have experienced population declines. These declines may be in part related to contemporary reductions in small-scale forest interior disturbances such as fire, windthrow, and treefalls. To mitigate the negative impacts of disturbance alteration and suppression on some late-successional species, strategies that emulate natural disturbance regimes are often advocated, but large-scale evaluations of these practices are rare. Here, we assessed the consequences of experimental disturbance (using partial timber harvest) on a severely declining late-successional species, the cerulean warbler (Setophaga cerulea), across the core of its breeding range in the Appalachian Mountains. We measured numerical (density), physiological (body condition), and demographic (age structure and reproduction) responses to three levels of disturbance and explored the potential impacts of disturbance on source-sink dynamics. Breeding densities of warblers increased one to four years after all canopy disturbances (vs. controls) and males occupying territories on treatment plots were in better condition than those on control plots. However, these beneficial effects of disturbance did not correspond to improvements in reproduction; nest success was lower on all treatment plots than on control plots in the southern region and marginally lower on light disturbance plots in the northern region. Our data suggest that only habitats in the southern region acted as sources, and interior disturbances in this region have the potential to create ecological traps at a local scale, but sources when viewed at broader scales. Thus, cerulean warblers would likely benefit from management that strikes a landscape-level balance between emulating natural disturbances in order to attract individuals into areas where current structure is inappropriate, and limiting anthropogenic disturbance in forests that already possess appropriate structural attributes in order to maintain maximum productivity.

Emulating natural disturbances for declining late-successional species: A case study of the consequences for Cerulean Warblers (Setophaga cerulea)

USGS Publications Warehouse

Boves, Than J.; Buehler, David A.; Sheehan, James; Wood, Petra Bohall; Rodewald, Amanda D.; Larkin, Jeffrey L.; Keyser, Patrick D.; Newell, Felicity L.; George, Gregory A.; Bakermans, Marja H.; Evans, Andrea; Beachy, Tiffany A.; McDermott, Molly E.; Perkins, Kelly A.; White, Matthew; Wigley, T. Bently

2013-01-01

Forest cover in the eastern United States has increased over the past century and while some late-successional species have benefited from this process as expected, others have experienced population declines. These declines may be in part related to contemporary reductions in small-scale forest interior disturbances such as fire, windthrow, and treefalls. To mitigate the negative impacts of disturbance alteration and suppression on some late-successional species, strategies that emulate natural disturbance regimes are often advocated, but large-scale evaluations of these practices are rare. Here, we assessed the consequences of experimental disturbance (using partial timber harvest) on a severely declining late-successional species, the cerulean warbler (Setophaga cerulea), across the core of its breeding range in the Appalachian Mountains. We measured numerical (density), physiological (body condition), and demographic (age structure and reproduction) responses to three levels of disturbance and explored the potential impacts of disturbance on source-sink dynamics. Breeding densities of warblers increased one to four years after all canopy disturbances (vs. controls) and males occupying territories on treatment plots were in better condition than those on control plots. However, these beneficial effects of disturbance did not correspond to improvements in reproduction; nest success was lower on all treatment plots than on control plots in the southern region and marginally lower on light disturbance plots in the northern region. Our data suggest that only habitats in the southern region acted as sources, and interior disturbances in this region have the potential to create ecological traps at a local scale, but sources when viewed at broader scales. Thus, cerulean warblers would likely benefit from management that strikes a landscape-level balance between emulating natural disturbances in order to attract individuals into areas where current structure is inappropriate, and limiting anthropogenic disturbance in forests that already possess appropriate structural attributes in order to maintain maximum productivity.

A 43-year systematic review and meta-analysis: case-fatality and risk of death among adults with tuberculous meningitis in Africa.

PubMed

Woldeamanuel, Yohannes W; Girma, Belaineh

2014-05-01

Tuberculous meningitis (TBM) is a preventable and curable common health problem among African adults. Poor nutrition, poverty, household crowding, drug resistant tuberculosis (TB) strains, AIDS, and malfunctioning TB control programs are important risk factors. We conducted a systematic review and meta-analysis of published literature reporting case-fatalities of TBM among adults in African countries from 1970 till date. A PubMed search identified relevant papers. Employed terms include 'adult tuberculous meningitis' AND 'tuberculosis Africa'. PRISMA review guidelines were applied. Adult TBM case-fatalities, odds ratio (OR), relative risk (RR), forest-plot meta-analysis for weighted OR and RR, funnel plots, L'Abbé plots, meta-regressed bubble plots, and inter-study homogeneity were computed. Among 15 studies included, adult TBM occurred in up to 28 % of all meningitis forms with case-fatality of 60 % (inverse-variance weighted 54 %). Fixed-effect meta-analysis revealed weighted OR and RR of adult TBM fatalities to be 4.37 (95 % CI 3.92, 4.88) and 2.53 (95 % CI 2.38, 2.69), respectively. Inter-study homogeneity was reliable, regional representativeness was adequate allowing generalizability, and funnel-plots behaved symmetrically with insignificant inconsistency. All cases were initiated with anti-TB medication, while some had 'breakthrough' TBM. In Africa, adult TBM has a significant public health importance with a very high fatality which has remained stagnant for the past half-century. This reflects ongoing low quality of medical care at facilities where lengthy referrals end up. Community-based studies can reveal higher unaccounted morbidity, accrued disability, and larger mortality. Improving access points for early TB management at community-level, developing health infra-structure for comprehensive case management at facility-level, and poverty reduction can help combat this multi-faceted problem--whose reduction can in return help fight poverty.

Behavioral responses of cotton mice (Peromyscus gossypinus) to large amounts of coarse woody debris.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hinkleman, Travis M.

Hinkleman, Travis M. 2004. MS Thesis. Clemson University, Clemson, South Carolina. 62 pp. Coarse woody debris (CWD) is any log, snag, or downed branch >10 cm in diameter. As a major structural feature of forest ecosystems, CWD serves as an important habitat component for a variety of organisms. Rodents frequently use CWD for travel routes and daytime refugia. Although rodents are known to use CWD extensively and selectively, the use and selection of CWD by rodents may vary according to the abundance of CWD. The purpose of this project was to determine the effect of CWD abundance on the habitatmore » use patterns of a common terrestrial rodent, the cotton mouse (Peromyscus gossypinus). I tracked cotton mice with fluorescent pigments and radiotelemetry in 6 plots, situated in loblolly pine (Pinus taeda) stands, with manipulated levels of woody debris. Treatment plots had 6x the amount of woody debris as control plots. I determined log use and movement patterns from the paths produced by powder-tracking, and I identified daytime refugia by radio-tracking. Travel along logs was almost exclusively associated with the surface of logs (91%). The proportion of a movement path associated with logs was not the best predictor of path complexity; rather, the sex of the individual was the only significant indicator of relative displacement (i.e., males moved farther from the point of release than females) and vegetation cover was the only significant predictor of mean turning angle (i.e., increasing vegetation cover yielded more convoluted paths). Mice used logs to a greater extent on treatment plots (23.7%) than mice on control plots (4.8%). Mice on treatment plots used logs with less decay, less ground contact, and more bark than logs used by mice on control plots. Differences in log use patterns were largely a result of the attributes of available logs, but mice used logs selectively on treatment plots. Refuges were highly associated with woody debris, including refuges in rotting stumps (65%), root boles (13%), brush piles (8%), and logs (7%). Mice used different frequencies of refuge types between treatments; root bole and brush pile refuges were used more on treatment plots whereas stump and log refuges were used more on control plots. Refuge type, log volume, and tree basal area were significant predictors of refuge selection on control plots whereas refuge type and size were significant predictors of refuge selection on treatment plots. Refuges were significantly more dispersed on treatment plots. Mice used refuges more intensely and switched refuges less in the winter than the summer, regardless of woody debris abundance. The extensive and selective use of logs by cotton mice suggests that logs may be an important resource. However, logs are not a critical habitat component. Over half of the paths on control plots were not associated with logs, and logs were used infrequently as refuges. Nonetheless, refuges were highly associated with woody debris (e.g., stumps, root boles), which suggests that woody debris may be a critical habitat component.« less

The Rectangle Target Plot: A New Approach to the Graphical Presentation of Accuracy of Systems for Self-Monitoring of Blood Glucose.

PubMed

Stephan, Peter; Schmid, Christina; Freckmann, Guido; Pleus, Stefan; Haug, Cornelia; Müller, Peter

2015-10-09

The measurement accuracy of systems for self-monitoring of blood glucose (SMBG) is usually analyzed by a method comparison in which the analysis results are displayed using difference plots or similar graphs. However, such plots become difficult to comprehend as the number of data points displayed increases. This article introduces a new approach, the rectangle target plot (RTP), which aims to provide a simplified and comprehensible visualization of accuracy data. The RTP is based on ISO 15197 accuracy evaluations of SMBG systems. Two-sided tolerance intervals for normally distributed data are calculated for absolute and relative differences at glucose concentrations <100 mg/dL and ≥100 mg/dL. These tolerance intervals provide an estimator of where a 90% proportion of results is found with a confidence level of 95%. Plotting these tolerance intervals generates a rectangle whose center indicates the systematic measurement difference of the investigated system relative to the comparison method. The size of the rectangle depends on the measurement variability. The RTP provides a means of displaying measurement accuracy data in a simple and comprehensible manner. The visualization is simplified by reducing the displayed information from typically 200 data points to just 1 rectangle. Furthermore, this allows data for several systems or several lots from 1 system to be displayed clearly and concisely in a single graph. © 2015 Diabetes Technology Society.

Rill erosion in burned and salvage logged western montane forests: Effects of logging equipment type, traffic level, and slash treatment

NASA Astrophysics Data System (ADS)

Wagenbrenner, J. W.; Robichaud, P. R.; Brown, R. E.

2016-10-01

Following wildfires, forest managers often consider salvage logging burned trees to recover monetary value of timber, reduce fuel loads, or to meet other objectives. Relatively little is known about the cumulative hydrologic effects of wildfire and subsequent timber harvest using logging equipment. We used controlled rill experiments in logged and unlogged (control) forests burned at high severity in northern Montana, eastern Washington, and southern British Columbia to quantify rill overland flow and sediment production rates (fluxes) after ground-based salvage logging. We tested different types of logging equipment-feller-bunchers, tracked and wheeled skidders, and wheeled forwarders-as well as traffic levels and the addition of slash to skid trails as a best management practice. Rill experiments were done at each location in the first year after the fire and repeated in subsequent years. Logging was completed in the first or second post-fire year. We found that ground-based logging using heavy equipment compacted soil, reduced soil water repellency, and reduced vegetation cover. Vegetation recovery rates were slower in most logged areas than the controls. Runoff rates were higher in the skidder and forwarder plots than their respective controls in the Montana and Washington sites in the year that logging occurred, and the difference in runoff between the skidder and control plots at the British Columbia site was nearly significant (p = 0.089). Most of the significant increases in runoff in the logged plots persisted for subsequent years. The type of skidder, the addition of slash, and the amount of forwarder traffic did not significantly affect the runoff rates. Across the three sites, rill sediment fluxes were 5-1900% greater in logged plots than the controls in the year of logging, and the increases were significant for all logging treatments except the low use forwarder trails. There was no difference in the first-year sediment fluxes between the feller-buncher and tracked skidder plots, but the feller-buncher fluxes were lower than the values from the wheeled skidder plots. Manually adding slash after logging did not affect sediment flux rates. There were no significant changes in the control sediment fluxes over time, and none of the logging equipment impacted plots produced greater sediment fluxes than the controls in the second or third year after logging. Our results indicate that salvage logging increases the risk of sedimentation regardless of equipment type and amount of traffic, and that specific best management practices are needed to mitigate the hydrologic impacts of post-fire salvage logging.

Hadronic three-body decays of B mesons

NASA Astrophysics Data System (ADS)

Cheng, Hai-Yang

2016-04-01

Hadronic three-body decays of B mesons receive both resonant and nonresonant contributions. Dominant nonresonant contributions to tree-dominated three-body decays arise from the b → u tree transition which can be evaluated using heavy meson chiral perturbation theory valid in the soft meson limit. For penguin-dominated decays, nonresonant signals come mainly from the penguin amplitude governed by the matrix elements of scalar densities . The intermediate vector meson contributions to three-body decays are identified through the vector current, while the scalar meson resonances are mainly associated with the scalar density. We discuss inclusive and regional direct CP asymmetries. In the low mass regions of the Dalitz plot, we find that the regional CP violation is indeed largely enhanced with respect to the inclusive one.