Sample records for poorly understood area

  1. Effects of exurban development on trophic interactions in a desert landscape

    USDA-ARS?s Scientific Manuscript database

    Context Mechanisms of ecosystem change in urbanizing landscapes are poorly understood, especially in exurban areas featuring residential or commercial development set in a matrix of modified and natural vegetation. We asked how development altered trophic interactions and ecosystem processes in the ...

  2. Seasonal Pond Characteristics Across A Chronosequence Of djacent Forest Ages In Northern Minnesota, USA

    Treesearch

    Brian J. Palik; Darold P. Batzer; Richard Buech; Dale Nichols; Kory Cease; Leanne M. Egeland; Dwight E. Streblow

    2001-01-01

    Small seasonal ponds are abundant in many forest landscapes, yet they remain poorly understood in terms of their response to disturbance of the surrounding upland forest. The potential for such a response is large because of the small size and, hence, high perimeter-to-area ratios of most ponds. High perimeter-to-area ratio may increase the importance of functional...

  3. Integrating Demographic, Clinical,and Environmental Exposure Information to Identify Genomic Biomarkers Associated With Subtypes of Childhood Asthma

    EPA Science Inventory

    Childhood asthma is a multifactorial disease with a disturbingly high incidence in urbanized areas. The pathogenesis of asthma is poorly understood due to the complex relationship between genetic susceptibility and modulating environmental factors. The Mechanistic Indicators of C...

  4. Evaluating the relationship between the driver and roadway to address rural intersection safety using the SHRP 2 naturalistic driving study data.

    DOT National Transportation Integrated Search

    2016-02-01

    Rural intersections account for 30% of crashes in rural areas and 6% of all fatal crashes, representing a significant but poorly : understood safety problem. Transportation agencies have traditionally implemented countermeasures to address rural inte...

  5. A Qualitative Approach to Understanding Audience's Perceptions of Creativity in Online Advertising

    ERIC Educational Resources Information Center

    McStay, Andrew

    2010-01-01

    In this paper I seek to inquire upon audience's perceptions of creativity in online advertising--a heretofore poorly understood area. This paper initially outlines current academic understanding of creativity in online advertising, mainly derived from quantitative assessments. It then advances a qualitative methodology including diary-interviews…

  6. Social Motor Synchronization: Insights for Understanding Social Behavior in Autism

    ERIC Educational Resources Information Center

    Fitzpatrick, Paula; Romero, Veronica; Amaral, Joseph L.; Duncan, Amie; Barnard, Holly; Richardson, Michael J.; Schmidt, R. C.

    2017-01-01

    Impairments in social interaction and communication are critical features of ASD but the underlying processes are poorly understood. An under-explored area is the social motor synchronization that happens when we coordinate our bodies with others. Here, we explored the relationships between dynamical measures of social motor synchronization and…

  7. Endemic forest disturbances and stand structure of ponderosa pine (Pinus ponderosa) in the Upper Pine Creek Research Natural Area, South Dakota, USA

    Treesearch

    John E. Lundquist; Jose F. Negron

    2000-01-01

    Disturbances are natural and essential components of healthy ecosystems, but their ecological roles in the maintenance of endemic conditions for an area (that is, long-established levels of activity that are of low magnitude and relatively static intensity and cause unnoticed or relatively low amounts of tree killing, defoliation, or deformation) are poorly understood...

  8. Differential Engagement of Brain Regions within a "Core" Network during Scene Construction

    ERIC Educational Resources Information Center

    Summerfield, Jennifer J.; Hassabis, Demis; Maguire, Eleanor A.

    2010-01-01

    Reliving past events and imagining potential future events engages a well-established "core" network of brain areas. How the brain constructs, or reconstructs, these experiences or scenes has been debated extensively in the literature, but remains poorly understood. Here we designed a novel task to investigate this (re)constructive process by…

  9. Increasing Conceptual Understanding of Glycolysis & the Krebs Cycle Using Role-Play

    ERIC Educational Resources Information Center

    Ross, Pauline M.; Tronson, Deidre A.; Ritchie, Raymond J.

    2008-01-01

    Cellular respiration and metabolism are topics that are reportedly poorly understood by students and judged to be difficult by many teachers. Although these topics may not be required learning areas in some high school biology curricula, a grasp of fundamental concepts of cellular metabolic processes is advantageous for students undertaking (or…

  10. Probing crystallinity of never-dried wood cellulose with Raman spectroscopy

    Treesearch

    Umesh P. Agarwal; Sally A. Ralph; Richard S. Reiner; Carlos Baez

    2016-01-01

    The structure of wood cell wall cellulose in its native state remains poorly understood, limiting the progress of research and development in numerous areas, including plant science, biofuels, and nanocellulose based materials. It is generally believed that cellulose in cell wall microfibrils has both crystalline and amorphous regions. However, there is evidence that...

  11. Employment Programmes and Interventions Targeting Adults with Autism Spectrum Disorder: A Systematic Review of the Literature

    ERIC Educational Resources Information Center

    Hedley, Darren; Uljarevic, Mirko; Cameron, Lauren; Halder, Santoshi; Richdale, Amanda; Dissanayake, Cheryl

    2017-01-01

    Individuals with autism spectrum disorder face significant challenges entering the workforce; yet research in this area is limited and the issues are poorly understood. In this systematic review, empirical peer-reviewed studies on employment programmes, interventions and employment-related outcomes in individuals with autism spectrum disorder over…

  12. Evaluation of Undergraduate Geologists' Problem Solving and Cognition during Field Exams Using a Mixed Methods Approach

    ERIC Educational Resources Information Center

    Balliet, Russell N.

    2012-01-01

    Understanding how geologists conduct fieldwork through analysis of problem solving has significant potential impact on field instruction methods. Recent progress has been made in this area but the problem solving behaviors displayed by geologists during fieldwork and the associated underlying cognition remains poorly understood. We present…

  13. Is Pyrenophora semeniperda the cause of downy brome (Bromus tectorum) die-offs?

    Treesearch

    Owen W. Baughman; Susan E. Meyer

    2013-01-01

    Downy brome (cheatgrass) is a highly successful, exotic, winter annual invader in semi-arid western North America, forming near-monocultures across many landscapes. A frequent but poorly understood phenomenon in these heavily invaded areas is periodic 'die-off' or complete stand failure. The fungal pathogen Pyrenophora semeniperda is abundant in cheatgrass...

  14. The Multifactorial Epidemiology of Blackwater Fever.

    PubMed

    Shanks, G Dennis

    2017-12-01

    Blackwater fever is a massive hemolytic event usually occurring in the context of repeated falciparum malaria infections and intermittent quinine use. Its etiology is poorly understood, and it is rarely seen today. Historical epidemiological observations from the 20th century demonstrated variable patterns in prisoners in Andaman Islands, refugees in Macedonia, canal workers in Panama, expatriates in Rhodesia, and Second World War soldiers. Rates of blackwater fever per 1,000 malaria cases varied over two orders of magnitude. Islands, such as the Andaman Islands and New Guinea, had lower blackwater fever rates than continental areas. During the Second World War, blackwater fever rates in British soldiers in West Africa and Australian soldiers in New Guinea differed by a factor of 40 despite similar treatment regimens and falciparum malaria transmission risks. Blackwater fever is a complex interaction between host erythrocyte, falciparum malaria, and antimalarial drugs which remains poorly understood.

  15. Introduced pathogens follow the invasion front of a spreading alien host

    Treesearch

    Ann E. Hajek; Patrick C. Tobin

    2011-01-01

    When an invasive species first colonizes an area, there is an interval before any host-specific natural enemies arrive at the new location. Population densities of newly invading species are low, and the spatial and temporal interactions between spreading invasive species and specific natural enemies that follow are poorly understood. We measured infection rates of two...

  16. Habitat fragmentation and the persistence of lynx populations in Washington state

    Treesearch

    Gary M Koehler; Benjamin T. Maletzke; Jeff A. Von Kienast; Keith B. Aubry; Robert B. Wielgus; Robert H. Naney

    2008-01-01

    Lynx (Lynx canadensis) occur in the northern counties of Washington state, USA; however, current distribution and status of lynx in Washington are poorly understood. During winters 2002-2004 we snow-tracked lynx for 155 km within a 211-km2 area in northern Washington, to develop a model of lynx-habitat relationships that we...

  17. Natural recruitment of Wyoming big sagebrush in and adjacent to burned areas during an El Nino year

    USDA-ARS?s Scientific Manuscript database

    Wyoming big sagebrush is known to have episodic recruitment, but the driving factors for these recruitment events is poorly understood. Sagebrush is not fire adapted, is a mid to late seral species, and can take multiple decades to reach a similar density of unburned stands. Fire and climate regimes...

  18. The ecology of mixed severity fire regimes in Washington, Oregon, and Northern California

    Treesearch

    David Perry; Paul Hessburg; Carl Skinner; Thomas Spies; Scott Stephens; Alan Henry Taylor; Jerry Franklin; Brenda McComb; Greg Riegel

    2011-01-01

    Forests characterized by mixed-severity fires occupy a broad moisture gradient between lower elevation forests typified by low-severity fires and higher elevation forests in which high-severity, stand replacing fires are the norm. Mixed-severity forest types are poorly documented and little understood but likely occupy significant areas in the western United States. By...

  19. Variable flushing mechanisms and landscape structure control stream DOC export during snowmelt in a set of nested catchments

    Treesearch

    Vincent J. Pacific; Kelsey G. Jencso; Brian L. McGlynn

    2010-01-01

    Stream DOC dynamics during snowmelt have been the focus of much research, and numerous DOC mobilization and delivery mechanisms from riparian and upland areas have been proposed. However, landscape structure controls on DOC export from riparian and upland landscape elements remains poorly understood. We investigated stream and groundwater DOC dynamics across three...

  20. Sedimentation History and Provenance Analysis of a Late Mesozoic Rifting Event at Tavan Har, East Gobi, Mongolia

    ERIC Educational Resources Information Center

    Davidson, Sarah Cain

    2005-01-01

    The East Gobi Basin (EGB), which covers over 1.5 million square kilometers in southeastern Mongolia, is one of several basins in eastern China and Mongolia that was formed by extension and intracontinental rifting during the late Mesozoic. For reasons that are poorly understood, the continental lithosphere covering areas that are now known as…

  1. Global priorities for conservation across multiple dimensions of mammalian diversity

    PubMed Central

    Graham, Catherine H.; Costa, Gabriel C.; Hedges, S. Blair; Penone, Caterina; Radeloff, Volker C.; Rondinini, Carlo; Davidson, Ana D.

    2017-01-01

    Conservation priorities that are based on species distribution, endemism, and vulnerability may underrepresent biologically unique species as well as their functional roles and evolutionary histories. To ensure that priorities are biologically comprehensive, multiple dimensions of diversity must be considered. Further, understanding how the different dimensions relate to one another spatially is important for conservation prioritization, but the relationship remains poorly understood. Here, we use spatial conservation planning to (i) identify and compare priority regions for global mammal conservation across three key dimensions of biodiversity—taxonomic, phylogenetic, and traits—and (ii) determine the overlap of these regions with the locations of threatened species and existing protected areas. We show that priority areas for mammal conservation exhibit low overlap across the three dimensions, highlighting the need for an integrative approach for biodiversity conservation. Additionally, currently protected areas poorly represent the three dimensions of mammalian biodiversity. We identify areas of high conservation priority among and across the dimensions that should receive special attention for expanding the global protected area network. These high-priority areas, combined with areas of high priority for other taxonomic groups and with social, economic, and political considerations, provide a biological foundation for future conservation planning efforts. PMID:28674013

  2. Global priorities for conservation across multiple dimensions of mammalian diversity.

    PubMed

    Brum, Fernanda T; Graham, Catherine H; Costa, Gabriel C; Hedges, S Blair; Penone, Caterina; Radeloff, Volker C; Rondinini, Carlo; Loyola, Rafael; Davidson, Ana D

    2017-07-18

    Conservation priorities that are based on species distribution, endemism, and vulnerability may underrepresent biologically unique species as well as their functional roles and evolutionary histories. To ensure that priorities are biologically comprehensive, multiple dimensions of diversity must be considered. Further, understanding how the different dimensions relate to one another spatially is important for conservation prioritization, but the relationship remains poorly understood. Here, we use spatial conservation planning to ( i ) identify and compare priority regions for global mammal conservation across three key dimensions of biodiversity-taxonomic, phylogenetic, and traits-and ( ii ) determine the overlap of these regions with the locations of threatened species and existing protected areas. We show that priority areas for mammal conservation exhibit low overlap across the three dimensions, highlighting the need for an integrative approach for biodiversity conservation. Additionally, currently protected areas poorly represent the three dimensions of mammalian biodiversity. We identify areas of high conservation priority among and across the dimensions that should receive special attention for expanding the global protected area network. These high-priority areas, combined with areas of high priority for other taxonomic groups and with social, economic, and political considerations, provide a biological foundation for future conservation planning efforts.

  3. Health-Related Quality of Life and Health Behaviors in a Population-Based Sample of Older, Foreign-Born, Chinese American Adults Living in New York City

    ERIC Educational Resources Information Center

    Wyatt, Laura C.; Trinh-Shevrin, Chau; Islam, Nadia S.; Kwon, Simona C.

    2014-01-01

    Although the New York City Chinese population aged =65 years increased by 50% between 2000 and 2010, the health needs of this population are poorly understood. Approximately 3,001 Chinese individuals from high-density Asian American New York City areas were included in the REACH U.S. Risk Factor Survey; 805 (26.8%) were aged =65 years and…

  4. Early childhood growth failure and the developmental origins of adult disease: Do enteric infections and malnutrition increase risk for the metabolic syndrome?

    PubMed Central

    DeBoer, Mark D.; Lima, Aldo A. M.; Oría, Reinaldo B.; Scharf, Rebecca J.; Moore, Sean R.; Luna, Max A.; Guerrant, Richard L.

    2012-01-01

    Hypotheses regarding the developmental origins of health and disease postulate that developing fetuses–and potentially young children—undergo adaptive epigenetic changes with longstanding effects on metabolism and other processes. Ongoing research explores whether these adaptations occur during early life following malnutrition. In the developing world there remains a high degree of nutritional stunting—linear growth failure due to inadequate calories that may be exacerbated by inflammation from ongoing infections. In areas with poor sanitation children experience vicious cycles of enteric infections and malnutrition, resulting in poor nutrient absorption from intestinal mucosa changes now termed “environmental enteropathy.” Emerging evidence links early childhood diarrhea and/or growth failure with increased CVD risk factors in later life, including dyslipidemia, hypertension and glucose intolerance. The mechanisms for these associations remain poorly understood and may relate to epigenetic responses to poor nutrition, increased inflammation or both. Given increases in CVD in developing areas of the world, associations between childhood malnutrition, early life infections and increased CVD risk factors underscore further reasons to improve nutrition and infection-related outcomes for young children worldwide. PMID:23110643

  5. Poor supplementary motor area activation differentiates auditory verbal hallucination from imagining the hallucination☆

    PubMed Central

    Raij, Tuukka T.; Riekki, Tapani J.J.

    2012-01-01

    Neuronal underpinnings of auditory verbal hallucination remain poorly understood. One suggested mechanism is brain activation that is similar to verbal imagery but occurs without the proper activation of the neuronal systems that are required to tag the origins of verbal imagery in one's mind. Such neuronal systems involve the supplementary motor area. The supplementary motor area has been associated with awareness of intention to make a hand movement, but whether this region is related to the sense of ownership of one's verbal thought remains poorly known. We hypothesized that the supplementary motor area is related to the distinction between one's own mental processing (auditory verbal imagery) and similar processing that is attributed to non-self author (auditory verbal hallucination). To test this hypothesis, we asked patients to signal the onset and offset of their auditory verbal hallucinations during functional magnetic resonance imaging. During non-hallucination periods, we asked the same patients to imagine the hallucination they had previously experienced. In addition, healthy control subjects signaled the onset and offset of self-paced imagery of similar voices. Both hallucinations and the imagery of hallucinations were associated with similar activation strengths of the fronto-temporal language-related circuitries, but the supplementary motor area was activated more strongly during the imagery than during hallucination. These findings suggest that auditory verbal hallucination resembles verbal imagery in language processing, but without the involvement of the supplementary motor area, which may subserve the sense of ownership of one's own verbal imagery. PMID:24179739

  6. Laboratory tests for mumps vaccines.

    PubMed

    Minor, P D

    1997-03-01

    The action of live attenuated vaccines against mumps is poorly understood although their clinical efficacy is beyond doubt. The attenuated character of the vaccine is assured by consistency of production related to clinical trials, and limited studies of vaccine seeds in primates. Potency is assessed by infectivity in vitro and is subject to poorly understood sources of variation. Molecular biological studies are at an early stage.

  7. Seborrheic Dermatitis

    PubMed Central

    Berk, Thomas; Scheinfeld, Noah

    2010-01-01

    Abstract Seborrheic dermatitis is a common chronic inflammatory skin condition, characterized by scaling and poorly defined erythematous patches. It may be associated with pruritus, and it primarily affects sebum-rich areas, such as the scalp, face, upper chest, and back. Although its pathogenesis is not completely understood, some postulate that the condition results from colonization of the skin of affected individuals with species of the genus Malassezia (formerly, Pityrosporum). A variety of treatment modalities are available, including eradication of the fungus, reducing or treating the inflammatory process, and decreasing sebum production. PMID:20592880

  8. Biotechnological applications of transglutaminases.

    PubMed

    Rachel, Natalie M; Pelletier, Joelle N

    2013-10-22

    In nature, transglutaminases catalyze the formation of amide bonds between proteins to form insoluble protein aggregates. This specific function has long been exploited in the food and textile industries as a protein cross-linking agent to alter the texture of meat, wool, and leather. In recent years, biotechnological applications of transglutaminases have come to light in areas ranging from material sciences to medicine. There has also been a substantial effort to further investigate the fundamentals of transglutaminases, as many of their characteristics that remain poorly understood. Those studies also work towards the goal of developing transglutaminases as more efficient catalysts. Progress in this area includes structural information and novel chemical and biological assays. Here, we review recent achievements in this area in order to illustrate the versatility of transglutaminases.

  9. Health-related quality of life and health behaviors in a population-based sample of older, foreign-born, Chinese American adults living in New York City.

    PubMed

    Wyatt, Laura C; Trinh-Shevrin, Chau; Islam, Nadia S; Kwon, Simona C

    2014-10-01

    Although the New York City Chinese population aged ≥ 65 years increased by 50% between 2000 and 2010, the health needs of this population are poorly understood. Approximately 3,001 Chinese individuals from high-density Asian American New York City areas were included in the REACH U.S. Risk Factor Survey; 805 (26.8%) were aged ≥ 65 years and foreign-born. Four health-related quality of life and three behavioral risk factor outcome variables were examined. Descriptive statistics were conducted by gender, and logistic regression models assessed sociodemographic and health factors associated with each outcome. Few women were current smokers (1.3% vs. 14.8% of men), 19% of respondents ate fruits and vegetables more than or equal to five times daily, and one-third of individuals received sufficient weekly physical activity. Days of poor health were similar to the national population aged ≥ 65 years, while self-reported fair or poor health was much greater among our Chinese sample; over 60% of respondents rated their health as fair or poor. Lower education and lower obesity were significantly associated with cigarette smoking among men, and older age was significantly associated with insufficient physical activity overall. Female gender was significantly associated with all poor health days; older age was significantly associated with poor days of physical health, and lower income was significantly associated with poor days of physical health and fair or poor self-reported health. This study provides important health-related information on a rapidly growing older population and highlights future research areas to inform culturally appropriate health promotion and disease prevention strategies and policies within community-based settings. © 2014 Society for Public Health Education.

  10. Microbial ecology of corals, sponges, and algae in mesophotic coral environments

    USGS Publications Warehouse

    Olson, Julie B.; Kellogg, Christina A.

    2010-01-01

    Mesophotic coral ecosystems that occur at depths from 30 to 200 m have historically been understudied and yet appear to support a diverse biological community. The microbiology of these systems is particularly poorly understood, especially with regard to the communities associated with corals, sponges, and algae. This lack of information is partly due to the problems associated with gaining access to these environments and poor reproducibility across sampling methods. To summarize what is known about the microbiology of these ecosystems and to highlight areas where research is urgently needed, an overview of the current state of knowledge is presented. Emphasis is placed on the characterization of microbial populations, both prokaryotic and eukaryotic, associated with corals, sponges, and algae and the factors that influence microbial community structure. In topic areas where virtually nothing is known from mesophotic environments, the knowledge pertaining to shallow-water ecosystems is summarized to provide a starting point for a discussion on what might be expected in the mesophotic zone.

  11. Interhemispheric compensation: a hypothesis of TMS-induced effects on language-related areas.

    PubMed

    Andoh, Jamila; Martinot, Jean-Luc

    2008-06-01

    Repetitive transcranial magnetic stimulation (rTMS) applied over brain regions responsible for language processing is used to curtail potentially auditory hallucinations in schizophrenia patients and to investigate the functional organisation of language-related areas. Variability of effects is, however, marked across studies and between subjects. Furthermore, the mechanisms of action of rTMS are poorly understood. Here, we reviewed different factors related to the structural and functional organisation of the brain that might influence rTMS-induced effects. Then, by analogy with aphasia studies, and the plastic-adaptive changes in both the left and right hemispheres following aphasia recovery, a hypothesis is proposed about rTMS mechanisms over language-related areas (e.g. Wernicke, Broca). We proposed that the local interference induced by rTMS in language-related areas might be analogous to aphasic stroke and might lead to a functional reorganisation in areas connected to the virtual lesion for language recovery.

  12. Hypothalamic involvement in stress-induced hypocalcemia in rats.

    PubMed

    Aou, S; Ma, J; Hori, T

    1993-08-20

    Although hormonal regulation of blood calcium homeostasis has been intensively investigated in the peripheral organs, the involvement of the central nervous system in calcium regulation is still poorly understood. In the present study, we found that (1) bilateral lesions of the ventromedial nucleus of the hypothalamus (VMH), but not those of the paraventricular hypothalamic nucleus or the lateral hypothalamic area, eliminated immobilization (IMB)-induced hypocalcemia, and (2) electrical stimulation of the VMH decreased the blood calcium level. The results suggest that the VMH has a hypocalcemic function and plays a role in IMB-induced hypocalcemia.

  13. Burning mouth syndrome: A diagnostic and therapeutic dilemma

    PubMed Central

    Panat, Sunil R.

    2012-01-01

    Burning mouth syndrome (BMS) has been considered an enigmatic condition because the intensity of pain rarely corresponds to the clinical signs of the disease. Various local, systemic and psychological factors are associated with BMS, but its etiology is not fully understood. Also there is no consensus on the diagnosis and classification of BMS. A substantial volume of research has been focused on BMS during the last two decades. Progress has been made but the condition remains a fascinating, yet poorly understood area, in the field of oral medicine. Recently, there has been a resurgence of interest in this disorder with the discovery that the pain of BMS may be neuropathic in origin and originate both centrally and peripherally. The aim of this paper is to explore the condition of BMS with the specific outcome of increasing awareness of the condition. Key words:Burning mouth syndrome, stomatodynia, oral dysesthesia, pain management. PMID:24558551

  14. Overlooked habitat of a vulnerable gorgonian revealed in the Mediterranean and Eastern Atlantic by ecological niche modelling

    PubMed Central

    Boavida, Joana; Assis, Jorge; Silva, Inga; Serrão, Ester A.

    2016-01-01

    Factors shaping the distribution of mesophotic octocorals (30–200 m depth) remain poorly understood, potentially leaving overlooked coral areas, particularly near their bathymetric and geographic distributional limits. Yet, detailed knowledge about habitat requirements is crucial for conservation of sensitive gorgonians. Here we use Ecological Niche Modelling (ENM) relating thirteen environmental predictors and a highly comprehensive presence dataset, enhanced by SCUBA diving surveys, to investigate the suitable habitat of an important structuring species, Paramuricea clavata, throughout its distribution (Mediterranean and adjacent Atlantic). Models showed that temperature (11.5–25.5 °C) and slope are the most important predictors carving the niche of P. clavata. Prediction throughout the full distribution (TSS 0.9) included known locations of P. clavata alongside with previously unknown or unreported sites along the coast of Portugal and Africa, including seamounts. These predictions increase the understanding of the potential distribution for the northern Mediterranean and indicate suitable hard bottom areas down to >150 m depth. Poorly sampled habitats with predicted presence along Algeria, Alboran Sea and adjacent Atlantic coasts encourage further investigation. We propose that surveys of target areas from the predicted distribution map, together with local expert knowledge, may lead to discoveries of new P. clavata sites and identify priority conservation areas. PMID:27841263

  15. Atmospheric Research at BNL

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Peter Daum

    2008-10-06

    Brookhaven researcher Peter Daum discusses an international field experiment designed to make observations of critical components of the climate system of the southeastern Pacific. Because elements of this system are poorly understood and poorly represent

  16. Atmospheric Research at BNL

    ScienceCinema

    Peter Daum

    2017-12-09

    Brookhaven researcher Peter Daum discusses an international field experiment designed to make observations of critical components of the climate system of the southeastern Pacific. Because elements of this system are poorly understood and poorly represent

  17. Hydroacoustic basis for detection and characterization of eelgrass (Zostera marina)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sabol, B.; McCarthy, E.; Rocha, K.

    1997-06-01

    Understanding the distribution and density of seagrasses is important for a variety of environmental applications. Physical techniques for detection and characterization are labor and cost intensive and provide little insight into spatial distribution. optical-based techniques are limited by water clarity - frequently resulting in systematic underestimation of the extent of seagrasses. Active hydroacoustic techniques have shown the ability to detect seagrasses but the phenomenology behind detection is poorly understood. Laboratory and in-situ hydroacoustic measurements are presented for eelgrass (Zostera marina), a common seagrass in the United States. Based on these data, hydroacoustic approaches for wide area detection and mapping aremore » discussed and several are demonstrated within areas of established eelgrass beds in Narragansett Bay, Rhode Island.« less

  18. Controls on debris flow bulking in proglacial gully networks on Mount Rainier, WA

    NASA Astrophysics Data System (ADS)

    Legg, N. T.; Meigs, A.; Grant, G. E.; Kennard, P.

    2012-12-01

    Conversion of floodwaters to debris flows due to sediment bulking continues to be a poorly understood phenomenon. This study examines the initiation zone of a series of six debris flows that originated in proglacial areas of catchments on the flank of Mount Rainier during one storm in 2006. One-meter spatial resolution aerial photographs and LiDAR DEMs acquired before and after the storm reveal the lack of a single mass failure to explain the debris flow deposits. Rather, the imagery show appreciable gully widening along reaches up to approximately 1.5 km in length. Based on gully discharges estimated from rainfall rates and estimates of sediment contribution from gully wall width change, we find that the sediment volumes contributed from gully walls are sufficient to bulk floodwaters up to debris flow concentrations. Points in gullies where width change began (upstream limit) in 2006 have a power law trend (R2 = 0.58) in terms of slope-drainage area. Reaches with noticeable width change, which we refer to as bulking reaches (BR), plot along a similar trend with greater drainage areas and gentler slopes. We then extracted slope and drainage area of all proglacial drainage networks to examine differences in morphology between debris flow basins (DFB) and non-debris flow basins (NDFB), hypothesizing that DFB would have a greater portion of their drainage networks with similar morphology to BR than NDFB. A comparison of total network length with greater slope and area than BR reveals that the two basins types are not statistically different. Lengths of the longest reaches with greater slope and drainage area than the BR trend, however, are statistically longer in DFB than in the NDFBs (p<0.05). These results suggest that debris flow initiation by sediment bulking does not operate as a simple threshold phenomenon in slope-area space. Instead debris flow initiation via bulking depends upon slope, drainage area, and gully length. We suspect the dependence on length relates to the poorly understood bulking process where feedback mechanisms working to progressively increase sediment concentrations likely operate. The apparent length dependence revealed in this study requires a shift in thought about the conditions leading to debris flow generation in catchments dominated by unconsolidated and transportable material.

  19. Observations of emperor geese feeding at Nelson Lagoon, Alaska

    USGS Publications Warehouse

    Petersen, Margaret R.

    1983-01-01

    Estuaries along the north side of the Alaska Peninsula provide essential habitat for most of the American population of Emperor Goose (Chen canagica) during migration (Petersen and Gill 1982). Most of the population passes through Nelson Lagoon in spring and fall, with over 40,000 birds recorded there (Gill et al 1981). Little is known about the feeding activity of Emperor Geese while they are in estuaries, and the importance of estuaries as staging areas during spring and fall migration is poorly understood. Here I report observations on the feeding activity of emperor Geese at one estuary (Nelson Lagoon).

  20. How I treat bronchiolitis obliterans syndrome after hematopoietic stem cell transplantation.

    PubMed

    Williams, Kirsten M

    2017-01-26

    In past years, a diagnosis of bronchiolitis obliterans syndrome (BOS) after allogeneic hematopoietic cell transplant (HCT) conferred nearly universal mortality secondary to lack of consensus for diagnostic criteria, poorly understood disease pathogenesis, and very few studies of therapeutic or supportive care interventions. Recently, however, progress has been made in these areas: revised consensus diagnostic guidelines are now available, supportive care has improved, there is greater understanding of potential mechanisms of disease, and prospective trials are being conducted. This article describes these advances and provides suggestions to optimize therapy for patients with BOS after HCT.

  1. Deconstructing and Reconstructing Cognitive Performance in Sleep Deprivation

    PubMed Central

    Jackson, Melinda L.; Gunzelmann, Glenn; Whitney, Paul; Hinson, John M.; Belenky, Gregory; Rabat, Arnaud; Van Dongen, Hans P. A.

    2012-01-01

    Summary Mitigation of cognitive impairment due to sleep deprivation in operational settings is critical for safety and productivity. Achievements in this area are hampered by limited knowledge about the effects of sleep loss on actual job tasks. Sleep deprivation has different effects on different cognitive performance tasks, but the mechanisms behind this task-specificity are poorly understood. In this context it is important to recognize that cognitive performance is not a unitary process, but involves a number of component processes. There is emerging evidence that these component processes are differentially affected by sleep loss. Experiments have been conducted to decompose sleep-deprived performance into underlying cognitive processes using cognitive-behavioral, neuroimaging and cognitive modeling techniques. Furthermore, computational modeling in cognitive architectures has been employed to simulate sleep-deprived cognitive performance on the basis of the constituent cognitive processes. These efforts are beginning to enable quantitative prediction of the effects of sleep deprivation across different task contexts. This paper reviews a rapidly evolving area of research, and outlines a theoretical framework in which the effects of sleep loss on cognition may be understood from the deficits in the underlying neurobiology to the applied consequences in real-world job tasks. PMID:22884948

  2. Deconstructing and reconstructing cognitive performance in sleep deprivation.

    PubMed

    Jackson, Melinda L; Gunzelmann, Glenn; Whitney, Paul; Hinson, John M; Belenky, Gregory; Rabat, Arnaud; Van Dongen, Hans P A

    2013-06-01

    Mitigation of cognitive impairment due to sleep deprivation in operational settings is critical for safety and productivity. Achievements in this area are hampered by limited knowledge about the effects of sleep loss on actual job tasks. Sleep deprivation has different effects on different cognitive performance tasks, but the mechanisms behind this task-specificity are poorly understood. In this context it is important to recognize that cognitive performance is not a unitary process, but involves a number of component processes. There is emerging evidence that these component processes are differentially affected by sleep loss. Experiments have been conducted to decompose sleep-deprived performance into underlying cognitive processes using cognitive-behavioral, neuroimaging and cognitive modeling techniques. Furthermore, computational modeling in cognitive architectures has been employed to simulate sleep-deprived cognitive performance on the basis of the constituent cognitive processes. These efforts are beginning to enable quantitative prediction of the effects of sleep deprivation across different task contexts. This paper reviews a rapidly evolving area of research, and outlines a theoretical framework in which the effects of sleep loss on cognition may be understood from the deficits in the underlying neurobiology to the applied consequences in real-world job tasks. Copyright © 2012 Elsevier Ltd. All rights reserved.

  3. Conservation status of the American horseshoe crab, (Limulus polyphemus): A regional assessment

    USGS Publications Warehouse

    Smith, David R.; Brockmann, H. Jane; Beekey, Mark A.; King, Timothy L.; Millard, Michael J.; Zaldívar-Rae, Jaime

    2017-01-01

    Horseshoe crabs have persisted for more than 200 million years, and fossil forms date to 450 million years ago. The American horseshoe crab (Limulus polyphemus), one of four extant horseshoe crab species, is found along the Atlantic coastline of North America ranging from Alabama to Maine, USA with another distinct population on the coasts of Campeche, Yucatán and Quintana Roo in the Yucatán Peninsula, México. Although the American horseshoe crab tolerates broad environmental conditions, exploitation and habitat loss threaten the species. We assessed the conservation status of the American horseshoe crab by comprehensively reviewing available scientific information on its range, life history, genetic structure, population trends and analyses, major threats, and conservation. We structured the status assessment by six genetically-informed regions and accounted for sub-regional differences in environmental conditions, threats, and management. The transnational regions are Gulf of Maine (USA), Mid-Atlantic (USA), Southeast (USA), Florida Atlantic (USA), Northeast Gulf of México (USA), and Yucatán Peninsula (México). Our conclusion is that the American horseshoe crab species is vulnerable to local extirpation and that the degree and extent of risk vary among and within the regions. The risk is elevated in the Gulf of Maine region due to limited and fragmented habitat. The populations of horseshoe crabs in the Mid-Atlantic region are stable in the Delaware Bay area, and regulatory controls are in place, but the risk is elevated in the New England area as evidenced by continuing declines understood to be caused by over-harvest. The populations of horseshoe crabs in the Southeast region are stable or increasing. The populations of horseshoe crabs in the Florida Atlantic region show mixed trends among areas, and continuing population reductions at the embayment level have poorly understood causes. Within the Northeast Gulf of Mexico, causes of population trends are poorly understood and currently there is no active management of horseshoe crabs. Horseshoe crabs within México have conservation protection based on limited and fragmented habitat and geographic isolation from other regions, but elevated risk applies to the horseshoe crabs in the Yucatán Peninsula region until sufficient data can confirm population stability. Future species status throughout its range will depend on the effectiveness of conservation to mitigate habitat loss and manage for sustainable harvest among and within regions.

  4. The tectonic puzzle of the Messina area (Southern Italy): Insights from new seismic reflection data

    PubMed Central

    Doglioni, Carlo; Ligi, Marco; Scrocca, Davide; Bigi, Sabina; Bortoluzzi, Giovanni; Carminati, Eugenio; Cuffaro, Marco; D'Oriano, Filippo; Forleo, Vittoria; Muccini, Filippo; Riguzzi, Federica

    2012-01-01

    The Messina Strait, that separates peninsular Italy from Sicily, is one of the most seismically active areas of the Mediterranean. The structure and seismotectonic setting of the region are poorly understood, although the area is highly populated and important infrastructures are planned there. New seismic reflection data have identified a number of faults, as well as a crustal scale NE-trending anticline few km north of the strait. These features are interpreted as due to active right-lateral transpression along the north-eastern Sicilian offshore, coexisting with extensional and right-lateral transtensional tectonics in the southern Messina Strait. This complex tectonic network appears to be controlled by independent and overlapping tectonic settings, due to the presence of a diffuse transfer zone between the SE-ward retreating Calabria subduction zone relative to slab advance in the western Sicilian side. PMID:23240075

  5. Estimating economic losses to tourism in Africa from the illegal killing of elephants

    NASA Astrophysics Data System (ADS)

    Naidoo, Robin; Fisher, Brendan; Manica, Andrea; Balmford, Andrew

    2016-11-01

    Recent surveys suggest tens of thousands of elephants are being poached annually across Africa, putting the two species at risk across much of their range. Although the financial motivations for ivory poaching are clear, the economic benefits of elephant conservation are poorly understood. We use Bayesian statistical modelling of tourist visits to protected areas, to quantify the lost economic benefits that poached elephants would have delivered to African countries via tourism. Our results show these figures are substantial (~USD $25 million annually), and that the lost benefits exceed the anti-poaching costs necessary to stop elephant declines across the continent's savannah areas, although not currently in the forests of central Africa. Furthermore, elephant conservation in savannah protected areas has net positive economic returns comparable to investments in sectors such as education and infrastructure. Even from a tourism perspective alone, increased elephant conservation is therefore a wise investment by governments in these regions.

  6. Estimating economic losses to tourism in Africa from the illegal killing of elephants.

    PubMed

    Naidoo, Robin; Fisher, Brendan; Manica, Andrea; Balmford, Andrew

    2016-11-01

    Recent surveys suggest tens of thousands of elephants are being poached annually across Africa, putting the two species at risk across much of their range. Although the financial motivations for ivory poaching are clear, the economic benefits of elephant conservation are poorly understood. We use Bayesian statistical modelling of tourist visits to protected areas, to quantify the lost economic benefits that poached elephants would have delivered to African countries via tourism. Our results show these figures are substantial (∼USD $25 million annually), and that the lost benefits exceed the anti-poaching costs necessary to stop elephant declines across the continent's savannah areas, although not currently in the forests of central Africa. Furthermore, elephant conservation in savannah protected areas has net positive economic returns comparable to investments in sectors such as education and infrastructure. Even from a tourism perspective alone, increased elephant conservation is therefore a wise investment by governments in these regions.

  7. Evidence of a High Density Population of Harvested Leopards in a Montane Environment

    PubMed Central

    Chase Grey, Julia N.; Kent, Vivien T.; Hill, Russell A.

    2013-01-01

    Populations of large carnivores can persist in mountainous environments following extensive land use change and the conversion of suitable habitat for agriculture and human habitation in lower lying areas of their range. The significance of these populations is poorly understood, however, and little attention has focussed on why certain mountainous areas can hold high densities of large carnivores and what the conservation implications of such populations might be. Here we use the leopard (Panthera pardus) population in the western Soutpansberg Mountains, South Africa, as a model system and show that montane habitats can support high numbers of leopards. Spatially explicit capture-recapture (SECR) analysis recorded the highest density of leopards reported outside of state-protected areas in sub-Saharan Africa. This density represents a temporally high local abundance of leopards and we explore the explanations for this alongside some of the potential conservation implications. PMID:24349375

  8. The tectonic puzzle of the Messina area (Southern Italy): insights from new seismic reflection data.

    PubMed

    Doglioni, Carlo; Ligi, Marco; Scrocca, Davide; Bigi, Sabina; Bortoluzzi, Giovanni; Carminati, Eugenio; Cuffaro, Marco; D'Oriano, Filippo; Forleo, Vittoria; Muccini, Filippo; Riguzzi, Federica

    2012-01-01

    The Messina Strait, that separates peninsular Italy from Sicily, is one of the most seismically active areas of the Mediterranean. The structure and seismotectonic setting of the region are poorly understood, although the area is highly populated and important infrastructures are planned there. New seismic reflection data have identified a number of faults, as well as a crustal scale NE-trending anticline few km north of the strait. These features are interpreted as due to active right-lateral transpression along the north-eastern Sicilian offshore, coexisting with extensional and right-lateral transtensional tectonics in the southern Messina Strait. This complex tectonic network appears to be controlled by independent and overlapping tectonic settings, due to the presence of a diffuse transfer zone between the SE-ward retreating Calabria subduction zone relative to slab advance in the western Sicilian side.

  9. Supporting Pakistani and Chinese families with young children: perspectives of mothers and health visitors.

    PubMed

    Hogg, R; de Kok, B; Netto, G; Hanley, J; Haycock-Stuart, E

    2015-05-01

    In the UK, public health nurses (health visitors) provide support and advice to families with young children, including those from minority ethnic communities. While the need for cultural sensitivity is being increasingly recognized, the factors which contribute to this sensitivity are poorly understood. The Pakistani and Chinese communities constitute the two largest minority ethnic groups in Scotland. This study explored Pakistani and Chinese women's experience of motherhood and of the health visiting service and public health nurses' experiences of working with Chinese and Pakistani mothers. Semi-structured individual interviews were carried out with 16 Pakistani and 15 Chinese mothers. Eight health visitors took part in two focus groups. The study was undertaken in an urban area of Scotland. Data were analysed thematically. Chinese and Pakistani mothers negotiate complex processes in order to ensure that their children maintain their own ethnic identity while fitting in with their peers in their adopted country. Health visitors were seen as supportive, although sometimes advice and information given was culturally inappropriate, and their role was often poorly understood. Health visitors were anxious to be sensitive to families' religious and cultural beliefs. Cultural sensitivity is an important factor in providing appropriate advice and help to Pakistani and Chinese families, and involves health visitors in considering views and practices on parenting which may differ across cultures, including their own. Family characteristics need to be understood on an individual basis, rather than making assumptions about clients' cultural norms and lifestyles. This is best achieved by exploring with mothers if they understand the advice and information they are being offered and also if it is appropriate to their cultural and religious beliefs. © 2014 John Wiley & Sons Ltd.

  10. A conceptual framework for Lake Michigan coastal/nearshore ecosystems, with application to Lake Michigan Lakewide Management Plan (LaMP) objectives

    USGS Publications Warehouse

    Seelbach, Paul W.; Fogarty, Lisa R.; Bunnell, David Bo; Haack, Sheridan K.; Rogers, Mark W.

    2013-01-01

    The Lakewide Management Plans (LaMPs) within the Great Lakes region are examples of broad-scale, collaborative resource-management efforts that require a sound ecosystems approach. Yet, the LaMP process is lacking a holistic framework that allows these individual actions to be planned and understood within the broader context of the Great Lakes ecosystem. In this paper we (1) introduce a conceptual framework that unifies ideas and language among Great Lakes managers and scientists, whose focus areas range from tributary watersheds to open-lake waters, and (2) illustrate how the framework can be used to outline the geomorphic, hydrologic biological, and societal processes that underlie several goals of the Lake Michigan LaMP, thus providing a holistic and fairly comprehensive roadmap for tackling these challenges. For each selected goal, we developed a matrix that identifies the key ecosystem processes within the cell for each lake zone and each discipline; we then provide one example where a process is poorly understood and a second where a process is understood, but its impact or importance is unclear. Implicit in these objectives was our intention to highlight the importance of the Great Lakes coastal/nearshore zone. Although the coastal/nearshore zone is the important linkage zone between the watershed and open-lake zones—and is the zone where most LaMP issues are focused--scientists and managers have a relatively poor understanding of how the coastal/nearshore zone functions. We envision follow-up steps including (1) collaborative development of a more detailed and more complete conceptual model of how (and where) identified processes are thought to function, and (2) a subsequent gap analysis of science and monitoring priorities.

  11. Ethnic Density Effects on Physical Morbidity, Mortality, and Health Behaviors: A Systematic Review of the Literature

    PubMed Central

    Shaw, Richard; Nazroo, James; Stafford, Mai; Albor, Christo; Atkin, Karl; Kiernan, Kathleen; Wilkinson, Richard; Pickett, Kate

    2012-01-01

    It has been suggested that people in racial/ethnic minority groups are healthier when they live in areas with a higher concentration of people from their own ethnic group, a so-called ethnic density effect. Ethnic density effects are still contested, and the pathways by which ethnic density operates are poorly understood. The aim of this study was to systematically review the literature examining the ethnic density effect on physical health, mortality, and health behaviors. Most studies report a null association between ethnic density and health. Protective ethnic density effects are more common than adverse associations, particularly for health behaviors and among Hispanic people. Limitations of the literature include inadequate adjustment for area deprivation and limited statistical power across ethnic density measures and study samples. PMID:23078507

  12. Genetics and epigenetics of rheumatoid arthritis

    PubMed Central

    Viatte, Sebastien; Plant, Darren; Raychaudhuri, Soumya

    2013-01-01

    Investigators have made key advances in rheumatoid arthritis (RA) genetics in the past 10 years. Although genetic studies have had limited influence on clinical practice and drug discovery, they are currently generating testable hypotheses to explain disease pathogenesis. Firstly, we review here the major advances in identifying RA genetic susceptibility markers both within and outside of the MHC. Understanding how genetic variants translate into pathogenic mechanisms and ultimately into phenotypes remains a mystery for most of the polymorphisms that confer susceptibility to RA, but functional data are emerging. Interplay between environmental and genetic factors is poorly understood and in need of further investigation. Secondly, we review current knowledge of the role of epigenetics in RA susceptibility. Differences in the epigenome could represent one of the ways in which environmental exposures translate into phenotypic outcomes. The best understood epigenetic phenomena include post-translational histone modifications and DNA methylation events, both of which have critical roles in gene regulation. Epigenetic studies in RA represent a new area of research with the potential to answer unsolved questions. PMID:23381558

  13. Imported Case of Lassa Fever in Sweden With Encephalopathy and Sensorineural Hearing Deficit.

    PubMed

    Grahn, Anna; Bråve, Andreas; Lagging, Martin; Dotevall, Leif; Ekqvist, David; Hammarström, Helena; Karlberg, Helen; Lagerqvist, Nina; Sansone, Martina; Tegnell, Anders; Ulleryd, Peter; Studahl, Marie

    2016-10-01

    We describe an imported case of Lassa fever with both encephalopathy and bilateral sensorineural hearing deficit. Absence of fever during hospitalization, initially nonspecific symptoms, and onset of hearing deficit in a late stage of disease probably contributed to delayed diagnosis (14 days after admittance to hospital). The pathogenesis of neurological manifestations of Lassa fever is poorly understood and no specific treatment was given. A total of 118 personnel had close contact with the patient, but no secondary cases occurred. This case highlights the importance of considering Lassa fever as a differential diagnosis in patients with recent travel to endemic areas.

  14. Impact compaction of a granular material

    DOE PAGES

    Fenton, Gregg; Asay, Blaine; Dalton, Devon

    2015-05-19

    The dynamic behavior of granular materials has importance to a variety of engineering applications. Structural seismic coupling, planetary science, and earth penetration mechanics, are just a few of the application areas. Although the mechanical behavior of granular materials of various types have been studied extensively for several decades, the dynamic behavior of such materials remains poorly understood. High-quality experimental data are needed to improve our general understanding of granular material compaction physics. This study will describe how an instrumented plunger impact system can be used to measure pressure-density relationships for model materials at high and controlled strain rates and subsequentlymore » used for computational modeling.« less

  15. Arcus: Observatory Science

    NASA Astrophysics Data System (ADS)

    Valencic, Lynne; Arcus Team

    2018-01-01

    Arcus is a free-flying MIDEX satellite selected for Phase A and planned to launch in 2023. Its bandpass (~12-50 Å), high resolution (R > 2500 between 22-25 Å), and effective area (450 cm2 between 22-25 Å) make it ideal for studying numerous systems after its baseline mission concludes in 2026. For instance, hot star winds show strong but poorly understood variable spectra, as do cataclysmic variables and super-soft sources that may be the progenitors of Type Ia supernovae, and the nature of the ISM is still not well known. Arcus will also allow observations of small extended sources like supernova remnants and planetary nebulae.

  16. Research Review: The Neurobiology and Genetics of Maltreatment and Adversity

    ERIC Educational Resources Information Center

    McCrory, Eamon; De Brito, Stephane A.; Viding, Essi

    2010-01-01

    The neurobiological mechanisms by which childhood maltreatment heightens vulnerability to psychopathology remain poorly understood. It is likely that a complex interaction between environmental experiences (including poor caregiving) and an individual's genetic make-up influence neurobiological development across infancy and childhood, which in…

  17. NASA Aims to Create First-Ever Space-Based Sodium Lidar to Study Poorly Understood Mesosphere

    NASA Image and Video Library

    2017-12-08

    Caption: Mike Krainak (left) and Diego Janches recently won NASA follow-on funding to advance a spaceborne sodium lidar needed to probe Earth’s poorly understood mesosphere. Credits: NASA/W. Hrybyk More: A team of NASA scientists and engineers now believes it can leverage recent advances in a greenhouse-detecting instrument to build the world’s first space-based sodium lidar to study Earth’s poorly understood mesosphere. Scientist Diego Janches and laser experts Mike Krainak and Tony Yu, all of whom work at NASA’s Goddard Space Flight Center in Greenbelt, Maryland, are leading a research-and-development effort to further advance the sodium lidar, which the group plans to deploy on the International Space Station if it succeeds in proving its flightworthiness. Read more: go.nasa.gov/2rcGpSM NASA image use policy. NASA Goddard Space Flight Center enables NASA’s mission through four scientific endeavors: Earth Science, Heliophysics, Solar System Exploration, and Astrophysics. Goddard plays a leading role in NASA’s accomplishments by contributing compelling scientific knowledge to advance the Agency’s mission. Follow us on Twitter Like us on Facebook Find us on Instagram

  18. Auditory Processing Disorders: Acquisition and Treatment

    ERIC Educational Resources Information Center

    Moore, David R.

    2007-01-01

    Auditory processing disorder (APD) describes a mixed and poorly understood listening problem characterised by poor speech perception, especially in challenging environments. APD may include an inherited component, and this may be major, but studies reviewed here of children with long-term otitis media with effusion (OME) provide strong evidence…

  19. The soil biota composition along a progressive succession of secondary vegetation in a karst area.

    PubMed

    Zhao, Jie; Li, Shengping; He, Xunyang; Liu, Lu; Wang, Kelin

    2014-01-01

    Karst ecosystems are fragile and are in many regions degraded by anthropogenic activities. Current management of degraded karst areas focuses on aboveground vegetation succession or recovery and aims at establishing a forest ecosystem. Whether progressive succession of vegetation in karst areas is accompanied by establishment of soil biota is poorly understood. In the present study, soil microbial and nematode communities, as well as soil physico-chemical properties were studied along a progressive succession of secondary vegetation (from grassland to shrubland to forest) in a karst area in southwest China. Microbial biomass, nematode density, ratio of fungal to bacterial biomass, nematode structure index, and nematode enrichment index decreased with the secondary succession in the plant community. Overall, the results indicated a pattern of declines in soil biota abundance and food web complexity that was associated with a decrease in soil pH and a decrease in soil organic carbon content with the progressive secondary succession of the plant community. Our findings suggest that soil biota amendment is necessary during karst ecosystem restoration and establishment and management of grasslands may be feasible in karst areas.

  20. Enforcement authority and vegetation change at Kumbhalgarh wildlife sanctuary, Rajasthan, India.

    PubMed

    Robbins, Paul F; Chhangani, Anil K; Rice, Jennifer; Trigosa, Erika; Mohnot, S M

    2007-09-01

    Land cover change in protected areas is often associated with human use, especially illicit extraction, but the direction and spatial distribution of such effects and their drivers are poorly understood. We analyze and explain the spatial distribution of vegetation change at the Kumbhalgarh Wildlife Sanctuary in the Aravalli range of Rajasthan, India using remotely sensed data and observation of conservation institutions. Two satellite images are examined in time series over the 13 years following the founding of the sanctuary through a cross-tabulation technique of dominant classes of vegetation density. The resulting change trajectories are compared for their relative distance to high-traffic forest entrance points for local users. The results show 28% of the study area undergoing change, though in multiple trajectories, with both increasing and decreasing density of vegetation in discrete patches. Areas of change are shown to be closer to entrance points than areas experiencing no change. The patchiness of change results from complex issues in local enforcement authority for middle and lower-level officials in Forest Department bureaucracy, leading to further questions about the efficacy and impact of use restrictions in Protected Areas.

  1. Integration of color, orientation, and size functional domains in the ventral pathway

    PubMed Central

    Ghose, Geoffrey M.; Ts’o, Daniel Y.

    2017-01-01

    Abstract. Functional specialization within the extrastriate areas of the ventral pathway associated with visual form analysis is poorly understood. Studies comparing the functional selectivities of neurons within the early visual areas have found that there are more similar than different between the areas. We simultaneously imaged visually evoked activation over regions of V2 and V4 and parametrically varied three visual attributes for which selectivity exists in both areas: color, orientation, and size. We found that color selective regions were observed in both areas and were of similar size and spatial distribution. However, two major areal distinctions were observed: V4 contained a greater number and diversity of color-specific regions than V2 and exhibited a higher degree of overlap between domains for different functional attributes. In V2, size and color regions were largely segregated from orientation domains, whereas in V4 both color and size regions overlapped considerably with orientation regions. Our results suggest that higher-order composite selectivities in the extrastriate cortex may arise organically from the interactions afforded by an overlap of functional domains for lower order selectivities. PMID:28573155

  2. Observation of sandhill cranes' (Grus canadensis) flight behavior in heavy fog

    USGS Publications Warehouse

    Kirsch, Eileen M.; Wellik, Mike J.; Suarez, Manuel J.; Diehl, Robert H.; Lutes, Jim; Woyczik, Wendy; Krapfl, Jon; Sojda, Richard S.

    2015-01-01

    The behaviors of birds flying in low visibility conditions remain poorly understood. We had the opportunity to monitor Sandhill Cranes (Grus canadensis) flying in heavy fog with very low visibility during a comprehensive landscape use study of refuging cranes in the Horicon Marsh in southeastern Wisconsin. As part of the study, we recorded flight patterns of cranes with a portable marine radar at various locations and times of day, and visually counted cranes as they departed the roost in the morning. We compared flight patterns during a fog event with those recorded during clear conditions. In good visibility, cranes usually departed the night roost shortly after sunrise and flew in relatively straight paths toward foraging areas. In fog, cranes departed the roost later in the day, did not venture far from the roost, engaged in significantly more circling flight, and returned to the roost site rather than proceeding to foraging areas. We also noted that compared to mornings with good visibility, cranes flying in fog called more frequently than usual. The only time in this 2-year study that observers heard young of the year calling was during the fog event. The observed behavior of cranes circling and lingering in an area while flying in poor visibility conditions suggests that such situations may increase chances of colliding with natural or anthropogenic obstacles in the vicinity.

  3. Robust, non-invasive methods for metering groundwater well extraction in remote environments

    NASA Astrophysics Data System (ADS)

    Bulovic, Nevenka; Keir, Greg; McIntyre, Neil

    2017-04-01

    Quantifying the rate of extraction from groundwater wells can be essential for regional scale groundwater management and impact assessment. This is especially the case in regions heavily dependent on groundwater such as the semi-arid Surat and Bowen Basins in Queensland, Australia. Of the 30 000+ groundwater wells in this area, the majority of which are used for stock watering and domestic purposes, almost none have flow metering devices installed. As part of a research project to estimate regional groundwater extraction, we have undertaken a small scale flow metering program on a selected set of wells. Conventional in-line flow meters were unsuitable for our project, as both non-invasiveness and adaptability / suitability to a variety of discharge pipe characteristics was critical. We describe the use of two metering technologies not widely used in groundwater applications, non-invasive, clamp-on ultrasonic transit time flow meters and tipping bucket flow meters, as semi-permanent installations on discharge pipes of various artesian and sub-artesian groundwater wells. We present examples of detailed extraction rate time-series, which are of particular value in developing predictive models of water well extraction in data limited areas where water use dynamics and drivers are poorly understood. We conclude by discussing future project trajectories, which include expansion of the monitoring network through development of novel metering techniques and telemetry across large areas of poor connectivity.

  4. Effect of Complete Syndesmotic Disruption and Deltoid Injuries and Different Reduction Methods on Ankle Joint Contact Mechanics.

    PubMed

    LaMothe, Jeremy; Baxter, Josh R; Gilbert, Susannah; Murphy, Conor I; Karnovsky, Sydney C; Drakos, Mark C

    2017-06-01

    Syndesmotic injuries can be associated with poor patient outcomes and posttraumatic ankle arthritis, particularly in the case of malreduction. However, ankle joint contact mechanics following a syndesmotic injury and reduction remains poorly understood. The purpose of this study was to characterize the effects of a syndesmotic injury and reduction techniques on ankle joint contact mechanics in a biomechanical model. Ten cadaveric whole lower leg specimens with undisturbed proximal tibiofibular joints were prepared and tested in this study. Contact area, contact force, and peak contact pressure were measured in the ankle joint during simulated standing in the intact, injured, and 3 reduction conditions: screw fixation with a clamp, screw fixation without a clamp (thumb technique), and a suture-button construct. Differences in these ankle contact parameters were detected between conditions using repeated-measures analysis of variance. Syndesmotic disruption decreased tibial plafond contact area and force. Syndesmotic reduction did not restore ankle loading mechanics to values measured in the intact condition. Reduction with the thumb technique was able to restore significantly more joint contact area and force than the reduction clamp or suture-button construct. Syndesmotic disruption decreased joint contact area and force. Although the thumb technique performed significantly better than the reduction clamp and suture-button construct, syndesmotic reduction did not restore contact mechanics to intact levels. Decreased contact area and force with disruption imply that other structures are likely receiving more loads (eg, medial and lateral gutters), which may have clinical implications such as the development of posttraumatic arthritis.

  5. Estimating economic losses to tourism in Africa from the illegal killing of elephants

    PubMed Central

    Naidoo, Robin; Fisher, Brendan; Manica, Andrea; Balmford, Andrew

    2016-01-01

    Recent surveys suggest tens of thousands of elephants are being poached annually across Africa, putting the two species at risk across much of their range. Although the financial motivations for ivory poaching are clear, the economic benefits of elephant conservation are poorly understood. We use Bayesian statistical modelling of tourist visits to protected areas, to quantify the lost economic benefits that poached elephants would have delivered to African countries via tourism. Our results show these figures are substantial (∼USD $25 million annually), and that the lost benefits exceed the anti-poaching costs necessary to stop elephant declines across the continent's savannah areas, although not currently in the forests of central Africa. Furthermore, elephant conservation in savannah protected areas has net positive economic returns comparable to investments in sectors such as education and infrastructure. Even from a tourism perspective alone, increased elephant conservation is therefore a wise investment by governments in these regions. PMID:27802262

  6. Oceanic barnacles act as foundation species on plastic debris: implications for marine dispersal.

    PubMed

    Gil, Michael A; Pfaller, Joseph B

    2016-01-27

    Plastic has emerged as an abundant, stable substratum for oceanic dispersal of organisms via rafting. However, the ecological mechanisms underlying community diversity on plastic debris remain poorly understood. On a cruise from California to Hawai'i, we surveyed plastic debris, some likely originating from the 2011 Tōhoku tsunami, to examine the relationship between rafting community diversity and both habitat area and stalked barnacle (Lepas spp.) abundance. For sessile taxa richness, we observed an interaction in which the positive effect of debris area weakened the negative effect of barnacle cover. In contrast, for mobile taxa richness, including cohabiting species from opposite sides of the Pacific Ocean, barnacle abundance had a positive effect that was strongest at smaller debris sizes. These findings suggest that barnacles, through interactions with habitat area, have trait-dependent effects on other species, serving as both foundation species and competitors, mediating the diversity and dispersal potential of marine organisms on plastic debris.

  7. Loss of Gα12/13 exacerbates apical area dependence of actomyosin contractility

    PubMed Central

    Xie, Shicong; Mason, Frank M.; Martin, Adam C.

    2016-01-01

    During development, coordinated cell shape changes alter tissue shape. In the Drosophila ventral furrow and other epithelia, apical constriction of hundreds of epithelial cells folds the tissue. Genes in the Gα12/13 pathway coordinate collective apical constriction, but the mechanism of coordination is poorly understood. Coupling live-cell imaging with a computational approach to identify contractile events, we discovered that differences in constriction behavior are biased by initial cell shape. Disrupting Gα12/13 exacerbates this relationship. Larger apical area is associated with delayed initiation of contractile pulses, lower apical E-cadherin and F-actin levels, and aberrantly mobile Rho-kinase structures. Our results suggest that loss of Gα12/13 disrupts apical actin cortex organization and pulse initiation in a size-dependent manner. We propose that Gα12/13 robustly organizes the apical cortex despite variation in apical area to ensure the timely initiation of contractile pulses in a tissue with heterogeneity in starting cell shape. PMID:27489340

  8. Cave spiders choose optimal environmental factors with respect to the generated entropy when laying their cocoon

    PubMed Central

    Chiavazzo, Eliodoro; Isaia, Marco; Mammola, Stefano; Lepore, Emiliano; Ventola, Luigi; Asinari, Pietro; Pugno, Nicola Maria

    2015-01-01

    The choice of a suitable area to spiders where to lay eggs is promoted in terms of Darwinian fitness. Despite its importance, the underlying factors behind this key decision are generally poorly understood. Here, we designed a multidisciplinary study based both on in-field data and laboratory experiments focusing on the European cave spider Meta menardi (Araneae, Tetragnathidae) and aiming at understanding the selective forces driving the female in the choice of the depositional area. Our in-field data analysis demonstrated a major role of air velocity and distance from the cave entrance within a particular cave in driving the female choice. This has been interpreted using a model based on the Entropy Generation Minimization - EGM - method, without invoking best fit parameters and thanks to independent lab experiments, thus demonstrating that the female chooses the depositional area according to minimal level of thermo-fluid-dynamic irreversibility. This methodology may pave the way to a novel approach in understanding evolutionary strategies for other living organisms. PMID:25556697

  9. Oceanic barnacles act as foundation species on plastic debris: implications for marine dispersal

    PubMed Central

    Gil, Michael A.; Pfaller, Joseph B.

    2016-01-01

    Plastic has emerged as an abundant, stable substratum for oceanic dispersal of organisms via rafting. However, the ecological mechanisms underlying community diversity on plastic debris remain poorly understood. On a cruise from California to Hawai’i, we surveyed plastic debris, some likely originating from the 2011 Tōhoku tsunami, to examine the relationship between rafting community diversity and both habitat area and stalked barnacle (Lepas spp.) abundance. For sessile taxa richness, we observed an interaction in which the positive effect of debris area weakened the negative effect of barnacle cover. In contrast, for mobile taxa richness, including cohabiting species from opposite sides of the Pacific Ocean, barnacle abundance had a positive effect that was strongest at smaller debris sizes. These findings suggest that barnacles, through interactions with habitat area, have trait-dependent effects on other species, serving as both foundation species and competitors, mediating the diversity and dispersal potential of marine organisms on plastic debris. PMID:26813348

  10. Investigating the ways in which health information technology can promote antimicrobial stewardship: a conceptual overview.

    PubMed

    King, Abby; Cresswell, Kathrin M; Coleman, Jamie J; Pontefract, Sarah K; Slee, Ann; Williams, Robin; Sheikh, Aziz

    2017-08-01

    Antimicrobial resistance is now recognised as a threat to health worldwide. Antimicrobial stewardship aims to promote the responsible use of antibiotics and is high on international and national policy agendas. Health information technology has the potential to support antimicrobial stewardship in a number of ways, but this field is still poorly characterised and understood. Building on a recent systematic review and expert roundtable discussions, we take a lifecycle perspective of antibiotic use in hospitals and identify potential targets for health information technology-based interventions to support antimicrobial stewardship. We aim for this work to help chart a future research agenda in this critically important area.

  11. Pivotal response treatment prompts a functional rewiring of the brain among individuals with autism spectrum disorder.

    PubMed

    Venkataraman, Archana; Yang, Daniel Y-J; Dvornek, Nicha; Staib, Lawrence H; Duncan, James S; Pelphrey, Kevin A; Ventola, Pamela

    2016-09-28

    Behavioral interventions for autism have gained prominence in recent years; however, the neural-systems-level targets of these interventions remain poorly understood. We use a novel Bayesian framework to extract network-based differences before and after a 16-week pivotal response treatment (PRT) regimen. Our results suggest that the functional changes induced by PRT localize to the posterior cingulate and are marked by a shift in connectivity from the orbitofrontal cortex to the occipital-temporal cortex. Our results illuminate a potential PRT-induced learning mechanism, whereby the neural circuits involved during social perception shift from sensory and attentional systems to higher-level object and face processing areas.

  12. Pivotal Response Treatment Prompts a Functional Rewiring of the Brain amongst Individuals with Autism Spectrum Disorder

    PubMed Central

    Venkataraman, Archana; Yang, Daniel Y.-J.; Dvornek, Nicha; Staib, Lawrence H.; Duncan, James S.; Pelphrey, Kevin A.; Ventola, Pamela

    2016-01-01

    Behavioral interventions for autism have gained prominence in recent years; however, the neural-systems-level targets of these interventions remain poorly understood. We use a novel Bayesian framework to extract network-based differences before and after a 16-week Pivotal Response Treatment (PRT) regimen. Our results suggest that functional changes induced by PRT localize to the posterior cingulate and are marked by a shift in connectivity from the orbitofrontal cortex to the occipital temporal cortex. Our results illuminate a potential PRT-induced learning mechanism, whereby the neural circuits involved during social perception shift from sensory and attentional systems to higher-level object and face processing areas. PMID:27532879

  13. Mapping risk of Nipah virus transmission across Asia and across Bangladesh.

    PubMed

    Peterson, A Townsend

    2015-03-01

    Nipah virus is a highly pathogenic but poorly known paramyxovirus from South and Southeast Asia. In spite of the risks that it poses to human health, the geography and ecology of its occurrence remain little understood-the virus is basically known from Bangladesh and peninsular Malaysia, and little in between. In this contribution, I use documented occurrences of the virus to develop ecological niche-based maps summarizing its likely broader occurrence-although rangewide maps could not be developed that had significant predictive abilities, reflecting minimal sample sizes available, maps within Bangladesh were quite successful in identifying areas in which the virus is predictably present and likely transmitted. © 2013 APJPH.

  14. Reactive Granulomatous Dermatitis: A Review of Palisaded Neutrophilic and Granulomatous Dermatitis, Interstitial Granulomatous Dermatitis, Interstitial Granulomatous Drug Reaction, and a Proposed Reclassification.

    PubMed

    Rosenbach, Misha; English, Joseph C

    2015-07-01

    The terms "palisaded neutrophilic and granulomatous dermatitis," "interstitial granulomatous dermatitis," and the subset "interstitial granulomatous drug reaction" are a source of confusion. There exists substantial overlap among the entities with few strict distinguishing features. We review the literature and highlight areas of distinction and overlap, and propose a streamlined diagnostic workup for patients presenting with this cutaneous reaction pattern. Because the systemic disease associations and requisite workup are similar, and the etiopathogenesis is poorly understood but likely similar among these entities, we propose the simplified unifying term "reactive granulomatous dermatitis" to encompass these entities. Copyright © 2015 Elsevier Inc. All rights reserved.

  15. A Comparative Study of Airflow and Odorant Deposition in the Mammalian Nasal Cavity

    NASA Astrophysics Data System (ADS)

    Richter, Joseph; Rumple, Christopher; Ranslow, Allison; Quigley, Andrew; Pang, Benison; Neuberger, Thomas; Krane, Michael; van Valkenburgh, Blaire; Craven, Brent

    2013-11-01

    The complex structure of the mammalian nasal cavity provides a tortuous airflow path and a large surface area for respiratory air conditioning, filtering of inspired contaminants, and olfaction. Due to the small and contorted structure of the nasal turbinals, nasal anatomy and function remains poorly understood in most mammals. Here, we utilize high-resolution MRI scans to reconstruct anatomically-accurate models of the mammalian nasal cavity. These data are used to compare the form and function of the mammalian nose. High-fidelity computational fluid dynamics (CFD) simulations of nasal airflow and odorant deposition are presented and used to compare olfactory function across species (primate, rodent, canine, feline, ungulate).

  16. Cheniere forest as stopover habitat for migrant landbirds: Immediate effects of Hurricane Rita: Chapter 6D in Science and the storms-the USGS response to the hurricanes of 2005

    USGS Publications Warehouse

    Barrow, Wylie; Chadwick, Paul; Couvillion, Brady R.; Doyle, Thomas; Faulkner, Stephen; Jeske, Clint; Michot, Tommy; Randall, Lori; Wells, Chris; Wilson, Scott

    2007-01-01

    It is not known whether en route fall migratory birds (August-October) are likely to suffer more from direct or secondary effects of hurricanes. On September 24, 2005, Hurricane Rita wreaked havoc on Louisiana's coast by toppling trees over vast areas and by stripping away microhabitats that harbor the invertebrates and produce the fruits upon which migrant landbirds depend (e.g., canopy foliage, vine tangles, epiphytes, leaf litter, and thickets of perennial plant species). Such transient effects of a hurricane on wildlife food resources are poorly understood, but these effects may have longterm consequences for some wildlife species.

  17. Isotopic signals of summer denitrification in a northern hardwood forested catchment

    Treesearch

    Sarah K. Wexler; Christine L. Goodale; Kevin J. McGuire; Scott W. Bailey; Peter M. Groffman

    2014-01-01

    Despite decades of measurements, the nitrogen balance of temperate forest catchments remains poorly understood. Atmospheric nitrogen deposition often greatly exceeds streamwater nitrogen losses; the fate of the remaining nitrogen is highly uncertain. Gaseous losses of nitrogen to denitrification are especially poorly documented and are often ignored. Here, we provide...

  18. Punishment and Welfare: Paternal Incarceration and Families' Receipt of Public Assistance

    ERIC Educational Resources Information Center

    Sugie, Naomi F.

    2012-01-01

    The United States criminal justice and welfare systems are two important government institutions in the lives of the poor. Despite many theoretical discussions about their relationship, their operation at the level of offenders and families remains poorly understood. This paper utilizes Fragile Families and Child Wellbeing data to examine how…

  19. Processes Contributing to the Maintenance of Flying Phobia: A Narrative Review

    PubMed Central

    Clark, Gavin I.; Rock, Adam J.

    2016-01-01

    Flying phobia is a highly prevalent anxiety disorder, which causes sufferers significant distress and life interference. The processes which maintain flying phobia remain poorly understood. A systematic search of the literature was performed to identify what research has been conducted into the processes which may be involved in the fear of flying and whether processes which are believed to maintain other anxiety disorder diagnoses have been investigated in flying phobia. The results of the literature review are presented and related to existing cognitive behavioral theory and research. The results indicate that little research has been conducted into a number of areas considered important in the wider cognitive behavioral literature on anxiety disorders: namely attention, mental imagery, memory, worry, and safety-seeking behaviors. The review proposes a hypothetical model, derived from cognitive behavioral theory, for the processes which may be involved in maintaining flying phobia, and considers a number of areas for future research. PMID:27313550

  20. Wildlife population trends in protected areas predicted by national socio-economic metrics and body size

    PubMed Central

    Barnes, Megan D.; Craigie, Ian D.; Harrison, Luke B.; Geldmann, Jonas; Collen, Ben; Whitmee, Sarah; Balmford, Andrew; Burgess, Neil D.; Brooks, Thomas; Hockings, Marc; Woodley, Stephen

    2016-01-01

    Ensuring that protected areas (PAs) maintain the biodiversity within their boundaries is fundamental in achieving global conservation goals. Despite this objective, wildlife abundance changes in PAs are patchily documented and poorly understood. Here, we use linear mixed effect models to explore correlates of population change in 1,902 populations of birds and mammals from 447 PAs globally. On an average, we find PAs are maintaining populations of monitored birds and mammals within their boundaries. Wildlife population trends are more positive in PAs located in countries with higher development scores, and for larger-bodied species. These results suggest that active management can consistently overcome disadvantages of lower reproductive rates and more severe threats experienced by larger species of birds and mammals. The link between wildlife trends and national development shows that the social and economic conditions supporting PAs are critical for the successful maintenance of their wildlife populations. PMID:27582180

  1. The origin of continental crust: Outlines of a general theory

    NASA Technical Reports Server (NTRS)

    Lowman, P. D., Jr.

    1985-01-01

    The lower continental crust, formerly very poorly understood, has recently been investigated by various geological and geophysical techniques that are beginning to yield a generally agreed on though still vague model (Lowman, 1984). As typified by at least some exposed high grade terranes, such as the Scottish Scourian complex, the lower crust in areas not affected by Phanerozoic orogeny or crustal extension appears to consist of gently dipping granulite gneisses of intermediate bulk composition, formed from partly or largely supracrustal precursors. This model, to the degree that it is correct, has important implications for early crustal genesis and the origin of continental crust in general. Most important, it implies that except for areas of major overthrusting (which may of course be considerable) normal superposition relations prevail, and that since even the oldest exposed rocks are underlain by tens of kilometers of sial, true primordial crust may still survive in the lower crustal levels (of. Phinney, 1981).

  2. Preoptic leptin signaling modulates energy balance independent of body temperature regulation.

    PubMed

    Yu, Sangho; Cheng, Helia; François, Marie; Qualls-Creekmore, Emily; Huesing, Clara; He, Yanlin; Jiang, Yanyan; Gao, Hong; Xu, Yong; Zsombok, Andrea; Derbenev, Andrei V; Nillni, Eduardo A; Burk, David H; Morrison, Christopher D; Berthoud, Hans-Rudolf; Münzberg, Heike

    2018-05-15

    The adipokine leptin acts on the brain to regulate energy balance but specific functions in many brain areas remain poorly understood. Among these, the preoptic area (POA) is well known to regulate core body temperature by controlling brown fat thermogenesis, and we have previously shown that glutamatergic, long-form leptin receptor (Lepr)-expressing neurons in the POA are stimulated by warm ambient temperature and suppress energy expenditure and food intake. Here we further investigate the role of POA leptin signaling in body weight regulation and its relationship to body temperature regulation in mice. We show that POA Lepr signaling modulates energy expenditure in response to internal energy state, and thus contributes to body weight homeostasis. However, POA leptin signaling is not involved in ambient temperature-dependent metabolic adaptations. Our study reveals a novel cell population through which leptin regulates body weight. © 2018, Yu et al.

  3. Predictive codes of familiarity and context during the perceptual learning of facial identities

    NASA Astrophysics Data System (ADS)

    Apps, Matthew A. J.; Tsakiris, Manos

    2013-11-01

    Face recognition is a key component of successful social behaviour. However, the computational processes that underpin perceptual learning and recognition as faces transition from unfamiliar to familiar are poorly understood. In predictive coding, learning occurs through prediction errors that update stimulus familiarity, but recognition is a function of both stimulus and contextual familiarity. Here we show that behavioural responses on a two-option face recognition task can be predicted by the level of contextual and facial familiarity in a computational model derived from predictive-coding principles. Using fMRI, we show that activity in the superior temporal sulcus varies with the contextual familiarity in the model, whereas activity in the fusiform face area covaries with the prediction error parameter that updated facial familiarity. Our results characterize the key computations underpinning the perceptual learning of faces, highlighting that the functional properties of face-processing areas conform to the principles of predictive coding.

  4. Forest cutting and impacts on carbon in the eastern United States

    USGS Publications Warehouse

    Zhou, Decheng; Liu, Shuguang; Oeding, Jennifer; Zhao, Shuqing

    2013-01-01

    Forest cutting is a major anthropogenic disturbance that affects forest carbon (C) storage and fluxes. Yet its characteristics and impacts on C cycling are poorly understood over large areas. Using recent annualized forest inventory data, we estimated cutting-related loss of live biomass in the eastern United States was 168 Tg C yr−1 from 2002 to 2010 (with C loss per unit forest area of 1.07 Mg ha−1 yr−1), which is equivalent to 70% of the total U.S. forest C sink or 11% of the national annual CO2 emissions from fossil-fuel combustion over the same period. We further revealed that specific cutting-related C loss varied with cutting intensities, forest types, stand ages, and geographic locations. Our results provide new insights to the characteristics of forest harvesting activities in the eastern United States and highlight the significance of partial cutting to regional and national carbon budgets.

  5. Magmas near the critical degassing pressure drive volcanic unrest towards a critical state.

    PubMed

    Chiodini, Giovanni; Paonita, Antonio; Aiuppa, Alessandro; Costa, Antonio; Caliro, Stefano; De Martino, Prospero; Acocella, Valerio; Vandemeulebrouck, Jean

    2016-12-20

    During the reawaking of a volcano, magmas migrating through the shallow crust have to pass through hydrothermal fluids and rocks. The resulting magma-hydrothermal interactions are still poorly understood, which impairs the ability to interpret volcano monitoring signals and perform hazard assessments. Here we use the results of physical and volatile saturation models to demonstrate that magmatic volatiles released by decompressing magmas at a critical degassing pressure (CDP) can drive volcanic unrest towards a critical state. We show that, at the CDP, the abrupt and voluminous release of H 2 O-rich magmatic gases can heat hydrothermal fluids and rocks, triggering an accelerating deformation that can ultimately culminate in rock failure and eruption. We propose that magma could be approaching the CDP at Campi Flegrei, a volcano in the metropolitan area of Naples, one of the most densely inhabited areas in the world, and where accelerating deformation and heating are currently being observed.

  6. Observational evidence for cloud cover enhancement over western European forests.

    PubMed

    Teuling, Adriaan J; Taylor, Christopher M; Meirink, Jan Fokke; Melsen, Lieke A; Miralles, Diego G; van Heerwaarden, Chiel C; Vautard, Robert; Stegehuis, Annemiek I; Nabuurs, Gert-Jan; de Arellano, Jordi Vilà-Guerau

    2017-01-11

    Forests impact regional hydrology and climate directly by regulating water and heat fluxes. Indirect effects through cloud formation and precipitation can be important in facilitating continental-scale moisture recycling but are poorly understood at regional scales. In particular, the impact of temperate forest on clouds is largely unknown. Here we provide observational evidence for a strong increase in cloud cover over large forest regions in western Europe based on analysis of 10 years of 15 min resolution data from geostationary satellites. In addition, we show that widespread windthrow by cyclone Klaus in the Landes forest led to a significant decrease in local cloud cover in subsequent years. Strong cloud development along the downwind edges of larger forest areas are consistent with a forest-breeze mesoscale circulation. Our results highlight the need to include impacts on cloud formation when evaluating the water and climate services of temperate forests, in particular around densely populated areas.

  7. Observational evidence for cloud cover enhancement over western European forests

    PubMed Central

    Teuling, Adriaan J.; Taylor, Christopher M.; Meirink, Jan Fokke; Melsen, Lieke A.; Miralles, Diego G.; van Heerwaarden, Chiel C.; Vautard, Robert; Stegehuis, Annemiek I.; Nabuurs, Gert-Jan; de Arellano, Jordi Vilà-Guerau

    2017-01-01

    Forests impact regional hydrology and climate directly by regulating water and heat fluxes. Indirect effects through cloud formation and precipitation can be important in facilitating continental-scale moisture recycling but are poorly understood at regional scales. In particular, the impact of temperate forest on clouds is largely unknown. Here we provide observational evidence for a strong increase in cloud cover over large forest regions in western Europe based on analysis of 10 years of 15 min resolution data from geostationary satellites. In addition, we show that widespread windthrow by cyclone Klaus in the Landes forest led to a significant decrease in local cloud cover in subsequent years. Strong cloud development along the downwind edges of larger forest areas are consistent with a forest-breeze mesoscale circulation. Our results highlight the need to include impacts on cloud formation when evaluating the water and climate services of temperate forests, in particular around densely populated areas. PMID:28074840

  8. Phase transition and flow-rate behavior of merging granular flows.

    PubMed

    Hu, Mao-Bin; Liu, Qi-Yi; Jiang, Rui; Hou, Meiying; Wu, Qing-Song

    2015-02-01

    Merging of granular flows is ubiquitous in industrial, mining, and geological processes. However, its behavior remains poorly understood. This paper studies the phase transition and flow-rate behavior of two granular flows merging into one channel. When the main channel is wider than the side channel, the system shows a remarkable two-sudden-drops phenomenon in the outflow rate when gradually increasing the main inflow. When gradually decreasing the main inflow, the system shows obvious hysteresis phenomenon. We study the flow-rate-drop phenomenon by measuring the area fraction and the mean velocity at the merging point. The phase diagram of the system is also presented to understand the occurrence of the phenomenon. We find that the dilute-to-dense transition occurs when the area fraction of particles at the joint point exceeds a critical value ϕ(c)=0.65±0.03.

  9. Wildlife population trends in protected areas predicted by national socio-economic metrics and body size

    NASA Astrophysics Data System (ADS)

    Barnes, Megan D.; Craigie, Ian D.; Harrison, Luke B.; Geldmann, Jonas; Collen, Ben; Whitmee, Sarah; Balmford, Andrew; Burgess, Neil D.; Brooks, Thomas; Hockings, Marc; Woodley, Stephen

    2016-09-01

    Ensuring that protected areas (PAs) maintain the biodiversity within their boundaries is fundamental in achieving global conservation goals. Despite this objective, wildlife abundance changes in PAs are patchily documented and poorly understood. Here, we use linear mixed effect models to explore correlates of population change in 1,902 populations of birds and mammals from 447 PAs globally. On an average, we find PAs are maintaining populations of monitored birds and mammals within their boundaries. Wildlife population trends are more positive in PAs located in countries with higher development scores, and for larger-bodied species. These results suggest that active management can consistently overcome disadvantages of lower reproductive rates and more severe threats experienced by larger species of birds and mammals. The link between wildlife trends and national development shows that the social and economic conditions supporting PAs are critical for the successful maintenance of their wildlife populations.

  10. Acute clinical recovery from sport-related concussion.

    PubMed

    Nelson, Lindsay D; Janecek, Julie K; McCrea, Michael A

    2013-12-01

    Concussion is a highly prevalent injury in contact and collision sports that has historically been poorly understood. An influx of sport-concussion research in recent years has led to a dramatic improvement in our understanding of the injury's defining characteristics and natural history of recovery. In this review, we discuss the current state of knowledge regarding the characteristic features of concussion and typical acute course of recovery, with an emphasis on the aspects of functioning most commonly assessed by clinicians and researchers (e.g., symptoms, cognitive deficits, postural stability). While prototypical clinical recovery is becoming better understood, questions remain regarding what factors (e.g., injury severity, demographic variables, history of prior concussions, psychological factors) may explain individual variability in recovery. Although research concerning individual differences in response to concussion is relatively new, and in many cases limited methodologically, we discuss the evidence about several potential moderators of concussion recovery and point out areas for future research. Finally, we describe how increased knowledge about the negative effects of and recovery following concussion has been translated into clinical guidelines for managing concussed athletes.

  11. Pelagic ecology of the South West Indian Ocean Ridge seamounts: Introduction and overview

    NASA Astrophysics Data System (ADS)

    Rogers, A. D.

    2017-02-01

    The Indian Ocean was described by Behrman (1981) as the "Forlorn Ocean", a region neglected by science up to the late-1950s. For example, the Challenger Expedition from 1872 to 1876 largely avoided the Indian Ocean, sailing from Cape Town into Antarctic waters sampling around the Prince Edward Islands, Kerguelen Island and Crozet Islands before heading to Melbourne. From 1876 to the 1950s there were expeditions on several vessels including the Valdivia, Gauss and Planet (Germany), the Snellius (Netherlands), Discovery II, MahaBiss (United Kingdom), Albatross (Sweden), Dana and Galathea (Denmark; Behrman, 1981). There was no coordination between these efforts and overall the Indian Ocean, especially the deep sea remained perhaps the most poorly explored of the world's oceans. This situation was largely behind the multilateral effort represented by the International Indian Ocean Expedition (IIEO), which was coordinated by the Scientific Committee for Ocean Research (SCOR), and which ran from 1959-1965. Work during this expedition focused on the Arabian Sea, the area to the northwest of Australia and the waters over the continental shelves and slopes of coastal states in the region. Subsequently several large-scale international oceanographic programmes have included significant components in the Indian Ocean, including the Joint Global Ocean Flux Study (JGOFS) and the World Ocean Circulation Experiment (WOCE). These studies were focused on physical oceanographic measurements and biogeochemistry and whilst the Indian Ocean is still less understood than other large oceans it is now integrated into the major ocean observation systems (Talley et al., 2011). This cannot be said for many aspects of the biology of the region, despite the fact that the Indian Ocean is one of the places where exploitation of marine living resources is still growing (FAO, 2016). The biology of the deep Indian Ocean outside of the Arabian Sea is particularly poorly understood given the presence of globally significant areas of seamounts, submarine plateaus, continental and island slopes.

  12. Evolution of a sediment wave in an experimental channel

    Treesearch

    Thomas E. Lisle; James E. Pizzuto; Hiroshi Ikeda; Fujiko Iseya; Yoshinori Kodama

    1997-01-01

    Abstract - The routing of bed material through channels is poorly understood. We approach the problem by observing and modeling the fate of a low-amplitude sediment wave of poorly sorted sand that we introduced into an experimental channel transporting sediment identical to that of the introduced wave. The wave essentially dispersed upstream and downstream without...

  13. Independent Learning--What We Do When You're Not There

    ERIC Educational Resources Information Center

    Hockings, Christine; Thomas, Liz; Ottaway, Jim; Jones, Rob

    2018-01-01

    Independent learning is one of the cornerstones of UK higher education yet it is poorly understood by students and is seen by politicians as a poor substitute for face to face teaching. This paper explores students' understandings, approaches and experiences of independent learning and how they may become more effective independent learners. This…

  14. The role of bedrock groundwater in rainfall-runoff response at hillslope and catchment scales

    Treesearch

    C. Gabrielli; J.J. McDonnell; W.T. Jarvis

    2012-01-01

    Bedrock groundwater dynamics in headwater catchments are poorly understood and poorly characterized. Direct hydrometric measurements have been limited due to the logistical challenges associated with drilling through hard rock in steep, remote and often roadless terrain. We used a new portable bedrock drilling system to explore bedrock groundwater dynamics aimed at...

  15. Asian and Pacific Islander American Poverty: The Working Poor and the Jobless Poor.

    ERIC Educational Resources Information Center

    Toji, Dean S.; Johnson, James H.

    1992-01-01

    Assesses the incidence of Asian-American and Pacific Islander-American poverty, and offers a theoretical explanation for its existence. It is argued that poverty of Americans of Asian and Pacific Island descent is best understood in the context of the linkage of labor migration and U.S. labor market segmentation. (SLD)

  16. The Soil Biota Composition along a Progressive Succession of Secondary Vegetation in a Karst Area

    PubMed Central

    He, Xunyang; Liu, Lu; Wang, Kelin

    2014-01-01

    Karst ecosystems are fragile and are in many regions degraded by anthropogenic activities. Current management of degraded karst areas focuses on aboveground vegetation succession or recovery and aims at establishing a forest ecosystem. Whether progressive succession of vegetation in karst areas is accompanied by establishment of soil biota is poorly understood. In the present study, soil microbial and nematode communities, as well as soil physico-chemical properties were studied along a progressive succession of secondary vegetation (from grassland to shrubland to forest) in a karst area in southwest China. Microbial biomass, nematode density, ratio of fungal to bacterial biomass, nematode structure index, and nematode enrichment index decreased with the secondary succession in the plant community. Overall, the results indicated a pattern of declines in soil biota abundance and food web complexity that was associated with a decrease in soil pH and a decrease in soil organic carbon content with the progressive secondary succession of the plant community. Our findings suggest that soil biota amendment is necessary during karst ecosystem restoration and establishment and management of grasslands may be feasible in karst areas. PMID:25379741

  17. Risk behaviors of 15–21 year olds in Mexico lead to a high prevalence of sexually transmitted infections: results of a survey in disadvantaged urban areas

    PubMed Central

    Gutierrez, Juan-Pablo; Bertozzi, Stefano M; Conde-Glez, Carlos J; Sanchez-Aleman, Miguel-Angel

    2006-01-01

    Background Due to the fact that adolescents are more likely to participate in high-risk behaviors, this sector of the population is particularly vulnerable to contracting sexually transmitted infections (STIs) and resultant health problems. Methods A survey was carried out among adolescents from poor homes in 204 small-urban areas of Mexico. Information was collected in relation to risk behaviors and socio-economic environment. A sub-group of the participants also provided blood and urine samples which were analyzed to detect sexually transmitted infections. Results The presence of Chlamydia was detected in nearly 8% of participants who had stated that they were sexually active (18%) and approximately 12% were positive for herpes type 2-specific antibodies. For both, a greater proportion of girls resulted positive compared to boys. The presence of these biological outcomes of sexual risk behavior was associated with other risk behaviors (smoking), but not with self-reported indicators of protected sex (reported use of condom during most recent sexual activity). Conclusion The results presented in this study show a startlingly high prevalence of HSV-2 among sexually active Mexican adolescents in poor urban areas, suggesting that this group has participated to a great extent in risky sexual practices. The relationships between socioeconomic environment and adolescent risk behavior need to be better understood if we are to design preventive interventions that modify the determinants of risk behaviors. PMID:16504147

  18. Effect of bedrock permeability on stream base flow mean transit time scaling relations: 1. A multiscale catchment intercomparison

    NASA Astrophysics Data System (ADS)

    Hale, V. Cody; McDonnell, Jeffrey J.

    2016-02-01

    The effect of bedrock permeability and underlying catchment boundaries on stream base flow mean transit time (MTT) and MTT scaling relationships in headwater catchments is poorly understood. Here we examine the effect of bedrock permeability on MTT and MTT scaling relations by comparing 15 nested research catchments in western Oregon; half within the HJ Andrews Experimental Forest and half at the site of the Alsea Watershed Study. The two sites share remarkably similar vegetation, topography, and climate and differ only in bedrock permeability (one poorly permeable volcanic rock and the other more permeable sandstone). We found longer MTTs in the catchments with more permeable fractured and weathered sandstone bedrock than in the catchments with tight, volcanic bedrock (on average, 6.2 versus 1.8 years, respectively). At the permeable bedrock site, 67% of the variance in MTT across catchments scales was explained by drainage area, with no significant correlation to topographic characteristics. The poorly permeable site had opposite scaling relations, where MTT showed no correlation to drainage area but the ratio of median flow path length to median flow path gradient explained 91% of the variance in MTT across seven catchment scales. Despite these differences, hydrometric analyses, including flow duration and recession analysis, and storm response analysis, show that the two sites share relatively indistinguishable hydrodynamic behavior. These results show that similar catchment forms and hydrologic regimes hide different subsurface routing, storage, and scaling behavior—a major issue if only hydrometric data are used to define hydrological similarity for assessing land use or climate change response.

  19. Exploring the Influence of Social Determinants, Social Capital, and Health Expertise on Health and the Rural Church.

    PubMed

    Plunkett, Robyn; Leipert, Beverly; Olson, Joanne

    2016-09-01

    In rural communities, religious places can significantly shape health for individuals, families, and communities. Rural churches are prominent community centers in rural communities and are deeply woven into rural culture. Thus, health influences arising from the rural church likely have health implications for the greater community. This article explores health influences emerging from rural churches using social determinants of health, social capital, and health expertise. Although nurses are important health resources for all populations, their value in rural areas may be exceedingly significant. The contribution of nurses to church-based health capital in rural communities may be quite significant and underestimated, although it remains poorly understood. © The Author(s) 2015.

  20. Tracking the global footprint of fisheries

    NASA Astrophysics Data System (ADS)

    Kroodsma, David A.; Mayorga, Juan; Hochberg, Timothy; Miller, Nathan A.; Boerder, Kristina; Ferretti, Francesco; Wilson, Alex; Bergman, Bjorn; White, Timothy D.; Block, Barbara A.; Woods, Paul; Sullivan, Brian; Costello, Christopher; Worm, Boris

    2018-02-01

    Although fishing is one of the most widespread activities by which humans harvest natural resources, its global footprint is poorly understood and has never been directly quantified. We processed 22 billion automatic identification system messages and tracked >70,000 industrial fishing vessels from 2012 to 2016, creating a global dynamic footprint of fishing effort with spatial and temporal resolution two to three orders of magnitude higher than for previous data sets. Our data show that industrial fishing occurs in >55% of ocean area and has a spatial extent more than four times that of agriculture. We find that global patterns of fishing have surprisingly low sensitivity to short-term economic and environmental variation and a strong response to cultural and political events such as holidays and closures.

  1. Social Motor Synchronization: Insights for Understanding Social Behavior in Autism.

    PubMed

    Fitzpatrick, Paula; Romero, Veronica; Amaral, Joseph L; Duncan, Amie; Barnard, Holly; Richardson, Michael J; Schmidt, R C

    2017-07-01

    Impairments in social interaction and communication are critical features of ASD but the underlying processes are poorly understood. An under-explored area is the social motor synchronization that happens when we coordinate our bodies with others. Here, we explored the relationships between dynamical measures of social motor synchronization and assessments of ASD traits. We found (a) spontaneous social motor synchronization was associated with responding to joint attention, cooperation, and theory of mind while intentional social motor synchronization was associated with initiating joint attention and theory of mind; and (b) social motor synchronization was associated with ASD severity but not fully explained by motor problems. Findings suggest that objective measures of social motor synchronization may provide insights into understanding ASD traits.

  2. What does productivity really mean? Towards an integrative paradigm in the search for biodiversity-productivity relationships

    Treesearch

    Liangjun Hu; Qinfeng Guo

    2013-01-01

    How species diversity relates to productivity remains a major debate. To date, however, the underlying mechanisms that regulate the ecological processes involved are still poorly understood. Three major issues persist in early efforts at resolution. First, in the context that productivity drives species diversity, how the pathways operate is poorly-explained. Second,...

  3. Low serum omega-3 and omega-6 polyunsaturated fatty acids and other metabolites are associated with poor linear growth in young children from rural Malawi

    USDA-ARS?s Scientific Manuscript database

    Stunting affects ~25% of children <5 y of age and is associated with impaired cognitive and motor development and increased morbidity and mortality. The pathogenesis of stunting is poorly understood. The purpose of this study was to identify altered metabolic pathways associated with child stunting...

  4. The effects of perinatal testosterone exposure on the DNA methylome of the mouse brain are late-emerging

    PubMed Central

    2014-01-01

    Background The biological basis for sex differences in brain function and disease susceptibility is poorly understood. Examining the role of gonadal hormones in brain sexual differentiation may provide important information about sex differences in neural health and development. Permanent masculinization of brain structure, function, and disease is induced by testosterone prenatally in males, but the possible mediation of these effects by long-term changes in the epigenome is poorly understood. Methods We investigated the organizational effects of testosterone on the DNA methylome and transcriptome in two sexually dimorphic forebrain regions—the bed nucleus of the stria terminalis/preoptic area and the striatum. To study the contribution of testosterone to both the establishment and persistence of sex differences in DNA methylation, we performed genome-wide surveys in male, female, and female mice given testosterone on the day of birth. Methylation was assessed during the perinatal window for testosterone's organizational effects and in adulthood. Results The short-term effect of testosterone exposure was relatively modest. However, in adult animals the number of genes whose methylation was altered had increased by 20-fold. Furthermore, we found that in adulthood, methylation at a substantial number of sexually dimorphic CpG sites was masculinized in response to neonatal testosterone exposure. Consistent with this, testosterone's effect on gene expression in the striatum was more apparent in adulthood. Conclusion Taken together, our data imply that the organizational effects of testosterone on the brain methylome and transcriptome are dramatic and late-emerging. Our findings offer important insights into the long-term molecular effects of early-life hormonal exposure. PMID:24976947

  5. Molecular mechanism of polymer-assisting supersaturation of poorly water-soluble loratadine based on experimental observations and molecular dynamic simulations.

    PubMed

    Zhang, Shenwu; Sun, Mengchi; Zhao, Yongshan; Song, Xuyang; He, Zhonggui; Wang, Jian; Sun, Jin

    2017-10-01

    Polymers have been usually used to retard nucleation and crystal growth in order to maintain supersaturation, yet their roles in inhibition of nucleation and crystal growth are poorly understood. In our work, the polymer-based supersaturation performances and molecular mechanisms of poorly aqueous soluble loratadine were investigated. Two common hydrophilic polymers (hydroxylpropylmethyl cellulose acetate succinate (HPMC-AS) and poly(vinylpyrrolidone-co-vinyl-acetate) (PVP-VA)) were used. It was found that HPMC-AS was a better polymer to prevent drug molecules from aggregation and to maintain the supersaturated state in solution than PVP-VA. The in vitro dissolution experiments showed that HPMC-AS solid dispersions had more rapid release at pH 4.5 and 6.8 media than PVP-VA solid dispersions under the un-sink condition. Moreover, molecular dynamic simulation results showed that HPMC-AS was more firmly absorbed onto a surface of the drug nanoparticles than PVP-VA due to bigger hydrophobic areas of HPMC-AS. Thereby, crystallization process of loratadine was inhibited in the presence of water to provide prolonged stability of the supersaturated state. In conclusion, polymers played a key role in maintaining supersaturation state of loratadine solid dispersions by strong drug-polymer interactions and the hydrophobic characteristic of polymers.

  6. Digestive tract absorption of polychlorinated dibenzo-p-dioxins, dibenzofurans, and biphenyls in a nursing infant

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McLachlan, M.S.

    The digestive tract absorption of environmental contaminants is an important but poorly understood parameter in contaminant is an important but poorly understood parameter in contaminant risk assessments. The net absorption of polychlorinated dibenzo-p-dioxins, dibenzofurans, and biphenyls in a nursing infant was measured under natural conditions over 12 days. The levels of the substances in the mother's milk were typical for Germany. It was found that for almost all congeners over 90% of the ingested compound was absorbed. This indicates that the common assumption of 100% absorption in nursing infants is reasonable. No firm conclusions could be drawn regarding the absorptionmore » of Cl7- and Cl8DD/F due to high blank levels in the cotton diapers used.« less

  7. Poorly Understood Aspects of Striated Muscle Contraction

    PubMed Central

    Månsson, Alf

    2015-01-01

    Muscle contraction results from cyclic interactions between the contractile proteins myosin and actin, driven by the turnover of adenosine triphosphate (ATP). Despite intense studies, several molecular events in the contraction process are poorly understood, including the relationship between force-generation and phosphate-release in the ATP-turnover. Different aspects of the force-generating transition are reflected in the changes in tension development by muscle cells, myofibrils and single molecules upon changes in temperature, altered phosphate concentration, or length perturbations. It has been notoriously difficult to explain all these events within a given theoretical framework and to unequivocally correlate observed events with the atomic structures of the myosin motor. Other incompletely understood issues include the role of the two heads of myosin II and structural changes in the actin filaments as well as the importance of the three-dimensional order. We here review these issues in relation to controversies regarding basic physiological properties of striated muscle. We also briefly consider actomyosin mutation effects in cardiac and skeletal muscle function and the possibility to treat these defects by drugs. PMID:25961006

  8. Poorly understood aspects of striated muscle contraction.

    PubMed

    Månsson, Alf; Rassier, Dilson; Tsiavaliaris, Georgios

    2015-01-01

    Muscle contraction results from cyclic interactions between the contractile proteins myosin and actin, driven by the turnover of adenosine triphosphate (ATP). Despite intense studies, several molecular events in the contraction process are poorly understood, including the relationship between force-generation and phosphate-release in the ATP-turnover. Different aspects of the force-generating transition are reflected in the changes in tension development by muscle cells, myofibrils and single molecules upon changes in temperature, altered phosphate concentration, or length perturbations. It has been notoriously difficult to explain all these events within a given theoretical framework and to unequivocally correlate observed events with the atomic structures of the myosin motor. Other incompletely understood issues include the role of the two heads of myosin II and structural changes in the actin filaments as well as the importance of the three-dimensional order. We here review these issues in relation to controversies regarding basic physiological properties of striated muscle. We also briefly consider actomyosin mutation effects in cardiac and skeletal muscle function and the possibility to treat these defects by drugs.

  9. The dynamic monitoring of aeolian desertification land distribution and its response to climate change in northern China

    NASA Astrophysics Data System (ADS)

    Feng, Lili; Jia, Zhiqing; Li, Qingxue

    2016-12-01

    Aeolian desertification is poorly understood despite its importance for indicating environment change. Here we exploit Gaofen-1(GF-1) and Moderate Resolution Imaging Spectroradiometer (MODIS) data to develop a quick and efficient method for large scale aeolian desertification dynamic monitoring in northern China. This method, which is based on Normalized Difference Desertification Index (NDDI) calculated by band1 & band2 of MODIS reflectance data (MODIS09A1). Then we analyze spatial-temporal change of aeolian desertification area and detect its possible influencing factors, such as precipitation, temperature, wind speed and population by Convergent Cross Mapping (CCM) model. It suggests that aeolian desertification area with population indicates feedback (bi-directional causality) between the two variables (P < 0.05), but forcing of aeolian desertification area by population is weak. Meanwhile, we find aeolian desertification area is significantly affected by temperature, as expected. However, there is no obvious forcing for the aeolian desertification area and precipitation. Aeolian desertification area with wind speed indicates feedback (bi-directional causality) between the two variables with significant signal (P < 0.01). We infer that aeolian desertification is greatly affected by natural factors compared with anthropogenic factors. For the desertification in China, we are greatly convinced that desertification prevention is better than control.

  10. The dynamic monitoring of aeolian desertification land distribution and its response to climate change in northern China

    PubMed Central

    Feng, Lili; Jia, Zhiqing; Li, Qingxue

    2016-01-01

    Aeolian desertification is poorly understood despite its importance for indicating environment change. Here we exploit Gaofen-1(GF-1) and Moderate Resolution Imaging Spectroradiometer (MODIS) data to develop a quick and efficient method for large scale aeolian desertification dynamic monitoring in northern China. This method, which is based on Normalized Difference Desertification Index (NDDI) calculated by band1 & band2 of MODIS reflectance data (MODIS09A1). Then we analyze spatial-temporal change of aeolian desertification area and detect its possible influencing factors, such as precipitation, temperature, wind speed and population by Convergent Cross Mapping (CCM) model. It suggests that aeolian desertification area with population indicates feedback (bi-directional causality) between the two variables (P < 0.05), but forcing of aeolian desertification area by population is weak. Meanwhile, we find aeolian desertification area is significantly affected by temperature, as expected. However, there is no obvious forcing for the aeolian desertification area and precipitation. Aeolian desertification area with wind speed indicates feedback (bi-directional causality) between the two variables with significant signal (P < 0.01). We infer that aeolian desertification is greatly affected by natural factors compared with anthropogenic factors. For the desertification in China, we are greatly convinced that desertification prevention is better than control. PMID:28004798

  11. Feral Cats Are Better Killers in Open Habitats, Revealed by Animal-Borne Video.

    PubMed

    McGregor, Hugh; Legge, Sarah; Jones, Menna E; Johnson, Christopher N

    2015-01-01

    One of the key gaps in understanding the impacts of predation by small mammalian predators on prey is how habitat structure affects the hunting success of small predators, such as feral cats. These effects are poorly understood due to the difficulty of observing actual hunting behaviours. We attached collar-mounted video cameras to feral cats living in a tropical savanna environment in northern Australia, and measured variation in hunting success among different microhabitats (open areas, dense grass and complex rocks). From 89 hours of footage, we recorded 101 hunting events, of which 32 were successful. Of these kills, 28% were not eaten. Hunting success was highly dependent on microhabitat structure surrounding prey, increasing from 17% in habitats with dense grass or complex rocks to 70% in open areas. This research shows that habitat structure has a profound influence on the impacts of small predators on their prey. This has broad implications for management of vegetation and disturbance processes (like fire and grazing) in areas where feral cats threaten native fauna. Maintaining complex vegetation cover can reduce predation rates of small prey species from feral cat predation.

  12. Racial Disparities In Geographic Access To Primary Care In Philadelphia.

    PubMed

    Brown, Elizabeth J; Polsky, Daniel; Barbu, Corentin M; Seymour, Jane W; Grande, David

    2016-08-01

    Primary care is often thought of as the gateway to improved health outcomes and can lead to more efficient use of health care resources. Because of primary care's cardinal importance, adequate access is an important health policy priority. In densely populated urban areas, spatial access to primary care providers across neighborhoods is poorly understood. We examined spatial variation in primary care access in Philadelphia, Pennsylvania. We calculated ratios of adults per primary care provider for each census tract and included buffer zones based on prespecified drive times around each tract. We found that the average ratio was 1,073; the supply of primary care providers varied widely across census tracts, ranging from 105 to 10,321. We identified six areas of Philadelphia that have much lower spatial accessibility to primary care relative to the rest of the city. After adjustment for sociodemographic and insurance characteristics, the odds of being in a low-access area were twenty-eight times greater for census tracts with a high proportion of African Americans than in tracts with a low proportion of African Americans. Project HOPE—The People-to-People Health Foundation, Inc.

  13. Neuronal correlates of decisions to speak and act: Spontaneous emergence and dynamic topographies in a computational model of frontal and temporal areas

    PubMed Central

    Garagnani, Max; Pulvermüller, Friedemann

    2013-01-01

    The neural mechanisms underlying the spontaneous, stimulus-independent emergence of intentions and decisions to act are poorly understood. Using a neurobiologically realistic model of frontal and temporal areas of the brain, we simulated the learning of perception–action circuits for speech and hand-related actions and subsequently observed their spontaneous behaviour. Noise-driven accumulation of reverberant activity in these circuits leads to their spontaneous ignition and partial-to-full activation, which we interpret, respectively, as model correlates of action intention emergence and action decision-and-execution. Importantly, activity emerged first in higher-association prefrontal and temporal cortices, subsequently spreading to secondary and finally primary sensorimotor model-areas, hence reproducing the dynamics of cortical correlates of voluntary action revealed by readiness-potential and verb-generation experiments. This model for the first time explains the cortical origins and topography of endogenous action decisions, and the natural emergence of functional specialisation in the cortex, as mechanistic consequences of neurobiological principles, anatomical structure and sensorimotor experience. PMID:23489583

  14. Tradeoffs between homing and habitat quality for spawning site selection by hatchery-origin Chinook salmon

    USGS Publications Warehouse

    Cram, Jeremy M.; Torgersen, Christian E.; Klett, Ryan S.; Pess, George R.; May, Darran; Pearsons, Todd N.; Dittman, Andrew H.

    2013-01-01

    Spawning site selection by female salmon is based on complex and poorly understood tradeoffs between the homing instinct and the availability of appropriate habitat for successful reproduction. Previous studies have shown that hatchery-origin Chinook salmon (Oncorhynchus tshawytscha) released from different acclimation sites return with varying degrees of fidelity to these areas. To investigate the possibility that homing fidelity is associated with aquatic habitat conditions, we quantified physical habitat throughout 165 km in the upper Yakima River basin (Washington, USA) and mapped redd and carcass locations from 2004 to 2008. Principal components analysis identified differences in substrate, cover, stream width, and gradient among reaches surrounding acclimation sites, and canonical correspondence analysis revealed that these differences in habitat characteristics were associated with spatial patterns of spawning (p < 0.01). These analyses indicated that female salmon may forego spawning near their acclimation area if the surrounding habitat is unsuitable. Evaluating the spatial context of acclimation areas in relation to surrounding habitat may provide essential information for effectively managing supplementation programs and prioritizing restoration actions.

  15. Predator removal and nesting waterbird success at San Francisco Bay, California

    USGS Publications Warehouse

    Meckstroth, A.M.; Miles, A.K.

    2005-01-01

    The efficacy of long-term predator removal in urbanized areas is poorly understood. The impact of predation on ground-nesting waterbirds, as well as predator abundance and composition in predator removal versus non-removal or reference sites were examined at South San Francisco Bay. The success of natural nests and predator activity was monitored using track plates, trip cameras, wire haircatchers and simulated nests. Removal sites had higher nest densities, but lower hatching success than reference sites. Predator composition and abundance were not different at the removal and reference sites for any predator other than feral Cat (Felis domesticus). Striped Skunk (Mephitis mephitis) comprised the majority (84%) of predators removed, yet remained the most abundant predators in removal and reference sites. Urban environments provide supplemental food that may influence skunks and other nest predators to immigrate into vacancies created by predator removal. Based on the findings from this study, predator removal should be applied intensively over a larger geographic area in order to be a viable management strategy for some mammalian species in urbanized areas.

  16. Linking Early Environmental Exposures to Adult Diseases

    MedlinePlus

    ... diseases. Given that many disorders arise during fetal development from disruptions in the dynamic but still poorly understood interplay of genes, environment and nutrition, prevention may have to occur decades ...

  17. Sleep disturbances among medical students: a global perspective.

    PubMed

    Azad, Muhammad Chanchal; Fraser, Kristin; Rumana, Nahid; Abdullah, Ahmad Faris; Shahana, Nahid; Hanly, Patrick J; Turin, Tanvir Chowdhury

    2015-01-15

    Medical students carry a large academic load which could potentially contribute to poor sleep quality above and beyond that already experienced by modern society. In this global literature review of the medical students' sleep experience, we find that poor sleep is not only common among medical students, but its prevalence is also higher than in non-medical students and the general population. Several factors including medical students' attitudes, knowledge of sleep, and academic demands have been identified as causative factors, but other potential mechanisms are incompletely understood. A better understanding about the etiology of sleep problems in medical trainees is essential if we hope to improve the overall quality of medical students' lives, including their academic performance. Sleep self-awareness and general knowledge appear insufficient in many studied cohorts, so increasing education for students might be one beneficial intervention. We conclude that there is ample evidence for a high prevalence of the problem, and research in this area should now expand towards initiatives to improve general sleep education for medical students, identify students at risk, and target them with programs to improve sleep. © 2015 American Academy of Sleep Medicine.

  18. What have we learned? A review of the literature on children's health and the environment in the Aral Sea area.

    PubMed

    Crighton, Eric James; Barwin, Lynn; Small, Ian; Upshur, Ross

    2011-04-01

    To review the published literature examining the impacts of the Aral Sea disaster on children's health. A systematic review of the English language literature. The literature search uncovered 26 peer-reviewed articles and four major reports published between 1994 and 2008. Anemia, diarrheal diseases, and high body burdens of toxic contaminants were identified as being among the significant health problems for children. These problems are associated either directly with the environmental disaster or indirectly via the deterioration of the region's economy and social and health care services. While links between persistent organic pollutant exposures and body burdens are clear, health impacts remain poorly understood. No clear evidence for the link between dust exposure and respiratory function was identified. While important questions about the nature of the child health and environment relationships remain to be answered, the literature unequivocally illustrates the seriousness of the public health tragedy and provides sufficient evidence to justify immediate action. Regrettably, international awareness of the crisis continues to be poor, and the level of action addressing the situation is wholly inadequate.

  19. Prediction of future hydrological regimes in poorly gauged high altitude basins: the case study of the upper Indus, Pakistan

    NASA Astrophysics Data System (ADS)

    Bocchiola, D.; Diolaiuti, G.; Soncini, A.; Mihalcea, C.; D'Agata, C.; Mayer, C.; Lambrecht, A.; Rosso, R.; Smiraglia, C.

    2011-04-01

    In the mountain regions of the Hindu Kush, Karakoram and Himalaya (HKH) the "third polar ice cap" of our planet, glaciers play the role of "water towers" by providing significant amount of melt water, especially in the dry season, essential for agriculture, drinking purposes, and hydropower production. Recently, most glaciers in the HKH have been retreating and losing mass, mainly due to significant regional warming, thus calling for assessment of future water resources availability for populations down slope. However, hydrology of these high altitude catchments is poorly studied and little understood. Most such catchments are poorly gauged, thus posing major issues in flow prediction therein, and representing in facts typical grounds of application of PUB concepts, where simple and portable hydrological modeling based upon scarce data amount is necessary for water budget estimation, and prediction under climate change conditions. In this preliminarily study, future (2060) hydrological flows in a particular watershed (Shigar river at Shigar, ca. 7000 km2), nested within the upper Indus basin and fed by seasonal melt from major glaciers, are investigated. The study is carried out under the umbrella of the SHARE-Paprika project, aiming at evaluating the impact of climate change upon hydrology of the upper Indus river. We set up a minimal hydrological model, tuned against a short series of observed ground climatic data from a number of stations in the area, in situ measured ice ablation data, and remotely sensed snow cover data. The future, locally adjusted, precipitation and temperature fields for the reference decade 2050-2059 from CCSM3 model, available within the IPCC's panel, are then fed to the hydrological model. We adopt four different glaciers' cover scenarios, to test sensitivity to decreased glacierized areas. The projected flow duration curves, and some selected flow descriptors are evaluated. The uncertainty of the results is then addressed, and use of the model for nearby catchments discussed. The proposed approach is valuable as a tool to investigate the hydrology of poorly gauged high altitude areas, and to project forward their hydrological behavior pending climate change.

  20. Prediction of future hydrological regimes in poorly gauged high altitude basins: the case study of the upper Indus, Pakistan

    NASA Astrophysics Data System (ADS)

    Bocchiola, D.; Diolaiuti, G.; Soncini, A.; Mihalcea, C.; D'Agata, C.; Mayer, C.; Lambrecht, A.; Rosso, R.; Smiraglia, C.

    2011-07-01

    In the mountain regions of the Hindu Kush, Karakoram and Himalaya (HKH) the "third polar ice cap" of our planet, glaciers play the role of "water towers" by providing significant amount of melt water, especially in the dry season, essential for agriculture, drinking purposes, and hydropower production. Recently, most glaciers in the HKH have been retreating and losing mass, mainly due to significant regional warming, thus calling for assessment of future water resources availability for populations down slope. However, hydrology of these high altitude catchments is poorly studied and little understood. Most such catchments are poorly gauged, thus posing major issues in flow prediction therein, and representing in fact typical grounds of application of PUB concepts, where simple and portable hydrological modeling based upon scarce data amount is necessary for water budget estimation, and prediction under climate change conditions. In this preliminarily study, future (2060) hydrological flows in a particular watershed (Shigar river at Shigar, ca. 7000 km2), nested within the upper Indus basin and fed by seasonal melt from major glaciers, are investigated. The study is carried out under the umbrella of the SHARE-Paprika project, aiming at evaluating the impact of climate change upon hydrology of the upper Indus river. We set up a minimal hydrological model, tuned against a short series of observed ground climatic data from a number of stations in the area, in situ measured ice ablation data, and remotely sensed snow cover data. The future, locally adjusted, precipitation and temperature fields for the reference decade 2050-2059 from CCSM3 model, available within the IPCC's panel, are then fed to the hydrological model. We adopt four different glaciers' cover scenarios, to test sensitivity to decreased glacierized areas. The projected flow duration curves, and some selected flow descriptors are evaluated. The uncertainty of the results is then addressed, and use of the model for nearby catchments discussed. The proposed approach is valuable as a tool to investigate the hydrology of poorly gauged high altitude areas, and to project forward their hydrological behavior pending climate change.

  1. An inexpensive and portable drill rig for bedrock groundwater studies in headwater catchments

    Treesearch

    C. Gabrielli; J.J. McDonnell

    2011-01-01

    Bedrock groundwater dynamics in headwater catchments are poorly understood and poorly characterized. Here, we present an inexpensive and portable bedrock drilling system designed for use in remote locations. Our system is capable of drilling bedrock wells up to 11 m deep and 38 mm in diameter in a wide range of bedrock types. The drill consists of a lawn mower engine...

  2. Researchers Realize Major Breakthrough in Understanding Endometriosis

    MedlinePlus

    ... a rarely studied and poorly understood disease that affects many, many women.” Health Terms: Women's Health RELATED LINKS RSS LISTSERV YOUTUBE FACEBOOK TWITTER GOOGLE+ NIH...T URNING D ISCOVERY I ...

  3. Fine-scale tracking and diet information of a marine predator reveals the origin and contrasting spatial distribution of prey

    NASA Astrophysics Data System (ADS)

    Alonso, Hany; Granadeiro, José P.; Dias, Maria P.; Catry, Teresa; Catry, Paulo

    2018-03-01

    The distribution of many marine organisms is still poorly understood, particularly in oceanic regions. Seabirds, as aerial predators which cover extensive areas across the oceans, can potentially be used to enhance our knowledge on the distribution and abundance of their prey. In this study, we combined tracking data and dietary data from individual Cory's shearwaters Calonectris borealis (n = 68) breeding in Selvagens archipelago, Madeira, Portugal, during the chick-rearing periods of 2011 and 2016, in order to infer prey origin within shearwaters' main foraging areas. The digestion state of each prey item in the diet was assessed and classified; and compared to digestion states from known prey items fed to captive birds. In a novel approach, we combined tracking data with information on the prey digestion duration and data on the transit times from foraging grounds to the colony to estimate the location of prey capture. We found a consistent heterogeneity in prey distribution across four different marine domains: Selvagens, deep-sea, seamounts, and continental shelf. In oceanic areas, the chub mackerel Scomber colias, the main prey of Cory's shearwaters, was strongly associated with seamounts and insular shelves, whereas oceanic species like pilot-fish, flying-squid, flying-fish were clearly associated with deep-sea waters. Sardines Sardina pilchardus, anchovies Engraulis encrasicolus and other coastal species were associated with the African shelf. Prey origin assignment was robust across three different sets of assumptions, and was also supported by information on the digestion state of prey collected over a large independent sampling period (671 samples, collected in 2008-2010). The integration of fine-scale dietary and foraging trip data from marine predators provides a new framework to gain insights into the distribution and abundance of prey species in poorly known oceanic areas.

  4. Magmas near the critical degassing pressure drive volcanic unrest towards a critical state

    PubMed Central

    Chiodini, Giovanni; Paonita, Antonio; Aiuppa, Alessandro; Costa, Antonio; Caliro, Stefano; De Martino, Prospero; Acocella, Valerio; Vandemeulebrouck, Jean

    2016-01-01

    During the reawaking of a volcano, magmas migrating through the shallow crust have to pass through hydrothermal fluids and rocks. The resulting magma–hydrothermal interactions are still poorly understood, which impairs the ability to interpret volcano monitoring signals and perform hazard assessments. Here we use the results of physical and volatile saturation models to demonstrate that magmatic volatiles released by decompressing magmas at a critical degassing pressure (CDP) can drive volcanic unrest towards a critical state. We show that, at the CDP, the abrupt and voluminous release of H2O-rich magmatic gases can heat hydrothermal fluids and rocks, triggering an accelerating deformation that can ultimately culminate in rock failure and eruption. We propose that magma could be approaching the CDP at Campi Flegrei, a volcano in the metropolitan area of Naples, one of the most densely inhabited areas in the world, and where accelerating deformation and heating are currently being observed. PMID:27996976

  5. Distribution and accumulation of organotin species in seawater, sediments and organisms collected from a Taiwan mariculture area.

    PubMed

    Liu, Li-Lian; Wang, Jih-Terng; Chung, Kuo-Nan; Leu, Ming-Yih; Meng, Pei-Jie

    2011-01-01

    The present study was undertaken to evaluate the distribution and accumulation of tributyltin (TBT) and triphenyltin (TPhT) in seawater, sediments and selected organisms from a cage mariculture area in southern Taiwan, Hsiao Liouchiou Island. Our results show that ΣOTs were found in concentrations as high as 196 ng/L in seawater collected from the sites in Pai-Sa harbor, and up 1040 ng/g dry wt. in sediments dredged from sites within Da-Fu harbor. Also, ΣOTs concentrations of 859 ng/g dry wt. were observed in the liver of cobia (Rachycentron canadum) from mariculture cages. As most published studies have focused on the acute toxicity and bioaccumulation of organotins in mussels, the effects of organotins on cobia and other marine fauna are still poorly understood. This study highlights the significance of ΣBTs accumulation in cobia, as well as in the sediments and seawater surrounding their culture facilities. Copyright © 2011 Elsevier Ltd. All rights reserved.

  6. Displacement effects of heavy human use on coral reef predators within the Molokini Marine Life Conservation District.

    PubMed

    Filous, Alexander; Friedlander, Alan M; Koike, Haruko; Lammers, Marc; Wong, Adam; Stone, Kristy; Sparks, Russell T

    2017-08-15

    The impact of marine ecotourism on reef predators is poorly understood and there is growing concern that overcrowding in Marine Protected Areas (MPAs) may disturb the species that these areas were established to protect. To improve our understanding of this issue, we used acoustic telemetry to examine the relationship between human activity at the Molokini Marine Life Conservation District (MLCD) and the habitat use of five reef-associated predators (Caranx melampygus, Caranx ignobilis, Triaenodon obesus, Carcharhinus amblyrhynchos, and Aprion virscens). During peak hours of human use, there was a negative relationship (R 2 =0.77, P<0.001) between the presence of bluefin trevally (Caranx melampygus) and vessels in subzone A. No other species showed strong evidence of this relationship. However, our results suggest that during this time, the natural ecosystem function that the reserve was established to protect may be compromised and overcrowding should be considered when managing MPAs. Copyright © 2017 Elsevier Ltd. All rights reserved.

  7. Distinct Sources of Deterministic and Stochastic Components of Action Timing Decisions in Rodent Frontal Cortex.

    PubMed

    Murakami, Masayoshi; Shteingart, Hanan; Loewenstein, Yonatan; Mainen, Zachary F

    2017-05-17

    The selection and timing of actions are subject to determinate influences such as sensory cues and internal state as well as to effectively stochastic variability. Although stochastic choice mechanisms are assumed by many theoretical models, their origin and mechanisms remain poorly understood. Here we investigated this issue by studying how neural circuits in the frontal cortex determine action timing in rats performing a waiting task. Electrophysiological recordings from two regions necessary for this behavior, medial prefrontal cortex (mPFC) and secondary motor cortex (M2), revealed an unexpected functional dissociation. Both areas encoded deterministic biases in action timing, but only M2 neurons reflected stochastic trial-by-trial fluctuations. This differential coding was reflected in distinct timescales of neural dynamics in the two frontal cortical areas. These results suggest a two-stage model in which stochastic components of action timing decisions are injected by circuits downstream of those carrying deterministic bias signals. Copyright © 2017 Elsevier Inc. All rights reserved.

  8. Understanding the Dynamics of the Oxic-Anoxic Interface in the Black Sea

    NASA Astrophysics Data System (ADS)

    Stanev, Emil V.; Poulain, Pierre-Marie; Grayek, Sebastian; Johnson, Kenneth S.; Claustre, Hervé; Murray, James W.

    2018-01-01

    The Black Sea, the largest semienclosed anoxic basin on Earth, can be considered as an excellent natural laboratory for oxic and anoxic biogeochemical processes. The suboxic zone, a thin interface between oxic and anoxic waters, still remains poorly understood because it has been undersampled. This has led to alternative concepts regarding the underlying processes that create it. Existing hypotheses suggest that the interface originates either by isopycnal intrusions that introduce oxygen or the dynamics of manganese redox cycling that are associated with the sinking of particles or chemosynthetic bacteria. Here we reexamine these concepts using high-resolution oxygen, sulfide, nitrate, and particle concentration profiles obtained with sensors deployed on profiling floats. Our results show an extremely stable structure in density space over the entire basin with the exception of areas near the Bosporus plume and in the southern areas dominated by coastal anticyclones. The absence of large-scale horizontal intrusive signatures in the open-sea supports a hypothesis prioritizing the role of biogeochemical processes.

  9. Spatial and temporal variability of rainfall and their effects on hydrological response in urban areas - a review

    NASA Astrophysics Data System (ADS)

    Cristiano, Elena; ten Veldhuis, Marie-claire; van de Giesen, Nick

    2017-07-01

    In urban areas, hydrological processes are characterized by high variability in space and time, making them sensitive to small-scale temporal and spatial rainfall variability. In the last decades new instruments, techniques, and methods have been developed to capture rainfall and hydrological processes at high resolution. Weather radars have been introduced to estimate high spatial and temporal rainfall variability. At the same time, new models have been proposed to reproduce hydrological response, based on small-scale representation of urban catchment spatial variability. Despite these efforts, interactions between rainfall variability, catchment heterogeneity, and hydrological response remain poorly understood. This paper presents a review of our current understanding of hydrological processes in urban environments as reported in the literature, focusing on their spatial and temporal variability aspects. We review recent findings on the effects of rainfall variability on hydrological response and identify gaps where knowledge needs to be further developed to improve our understanding of and capability to predict urban hydrological response.

  10. The genomic mosaicism of hybrid speciation

    PubMed Central

    Elgvin, Tore O.; Trier, Cassandra N.; Tørresen, Ole K.; Hagen, Ingerid J.; Lien, Sigbjørn; Nederbragt, Alexander J.; Ravinet, Mark; Jensen, Henrik; Sætre, Glenn-Peter

    2017-01-01

    Hybridization is widespread in nature and, in some instances, can result in the formation of a new hybrid species. We investigate the genetic foundation of this poorly understood process through whole-genome analysis of the hybrid Italian sparrow and its progenitors. We find overall balanced yet heterogeneous levels of contribution from each parent species throughout the hybrid genome and identify areas of novel divergence in the hybrid species exhibiting signals consistent with balancing selection. High-divergence areas are disproportionately located on the Z chromosome and overrepresented in gene networks relating to key traits separating the focal species, which are likely involved in reproductive barriers and/or species-specific adaptations. Of special interest are genes and functional groups known to affect body patterning, beak morphology, and the immune system, which are important features of diversification and fitness. We show that a combination of mosaic parental inheritance and novel divergence within the hybrid lineage has facilitated the origin and maintenance of an avian hybrid species. PMID:28630911

  11. Senescence marker protein 30 (SMP30)/regucalcin (RGN) expression decreases with aging, acute liver injuries and tumors in zebrafish

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fujisawa, Koichi; Terai, Shuji, E-mail: terais@yamaguchi-u.ac.jp; Hirose, Yoshikazu

    2011-10-22

    Highlights: {yields} Zebrafish SMP30/RGN mRNA expression decreases with aging. {yields} Decreased expression was observed in liver tumors as compared to the surrounding area. {yields} SMP30/RGN is important for liver proliferation and tumorigenesis. -- Abstract: Senescence marker protein 30 (SMP30)/regucalcin (RGN) is known to be related to aging, hepatocyte proliferation and tumorigenesis. However, expression and function of non-mammalian SMP30/RGN is poorly understood. We found that zebrafish SMP30/RGN mRNA expression decreases with aging, partial hepatectomy and thioacetamide-induced acute liver injury. SMP30/RGN expression was also greatly decreased in a zebrafish liver cell line. In addition, we induced liver tumors in adult zebrafish bymore » administering diethylnitrosamine. Decreased expression was observed in foci, hepatocellular carcinomas, cholangiocellular carcinomas and mixed tumors as compared to the surrounding area. We thus showed the importance of SMP30/RGN in liver proliferation and tumorigenesis.« less

  12. 76 FR 61379 - Final Recovery Plan, Bexar County Karst Invertebrates

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-10-04

    ... 200, Austin, TX (512-490-0057 ext. 223). FOR FURTHER INFORMATION CONTACT: Adam Zerrenner, at the above... poorly understood, recovery is also dependant on incorporating research findings into adaptive management...

  13. Fine-scale landscape genetics of the American badger (Taxidea taxus): disentangling landscape effects and sampling artifacts in a poorly understood species

    PubMed Central

    Kierepka, E M; Latch, E K

    2016-01-01

    Landscape genetics is a powerful tool for conservation because it identifies landscape features that are important for maintaining genetic connectivity between populations within heterogeneous landscapes. However, using landscape genetics in poorly understood species presents a number of challenges, namely, limited life history information for the focal population and spatially biased sampling. Both obstacles can reduce power in statistics, particularly in individual-based studies. In this study, we genotyped 233 American badgers in Wisconsin at 12 microsatellite loci to identify alternative statistical approaches that can be applied to poorly understood species in an individual-based framework. Badgers are protected in Wisconsin owing to an overall lack in life history information, so our study utilized partial redundancy analysis (RDA) and spatially lagged regressions to quantify how three landscape factors (Wisconsin River, Ecoregions and land cover) impacted gene flow. We also performed simulations to quantify errors created by spatially biased sampling. Statistical analyses first found that geographic distance was an important influence on gene flow, mainly driven by fine-scale positive spatial autocorrelations. After controlling for geographic distance, both RDA and regressions found that Wisconsin River and Agriculture were correlated with genetic differentiation. However, only Agriculture had an acceptable type I error rate (3–5%) to be considered biologically relevant. Collectively, this study highlights the benefits of combining robust statistics and error assessment via simulations and provides a method for hypothesis testing in individual-based landscape genetics. PMID:26243136

  14. [Distribution, surface and protected area of palm-swamps in Costa Rica and Nicaragua].

    PubMed

    Serrano-Sandí, Juan; Bonilla-Murillo, Fabian; Sasa, Mahmood

    2013-09-01

    In Central America, palm swamps are known collectively as yolillales. These wetlands are usually dominated by the raffia palm Raphia taedigera, but also by the royal palm Manicaria saccifera and -in lower extensions- by the American oil palm Elaeis oleifera. The yolillales tend to be poor in woody species and are characteristic of regions with high rainfall and extensive hydroperiods, so they remain flooded most of the year. The dominance of large raffia palm leaves in the canopy, allow these environments to be distinguishable in aerial photographs, which consequently has helped to map them along most of their distribution. However, while maps depicting yolillales are available, the extent of their surface area, perimeter and connectivity remains poorly understood. This is particularly true for yolillales in Costa Rica and Nicaragua, countries that share a good proportion of palm dominated swaps in the Rio San Juan Basin. In addition, it is not known the actual area of these environments that is under any category of protection according to the conservation systems of both countries. As a first step to catalog yolillal wetlands in Costa Rica and Nicaragua, this paper evaluates cartographic maps to delineate yolillales in the region. A subsample of yolillales mapped in this study were visited and we geo-referenced them and evaluate the extent and condition of the swamp. A total of 110 883.2ha are classified as yolillales in Nicaragua, equivalent to 22% of wetland surface area recorded for that country (excluding the Cocibolca and Xolothn Lakes). In Costa Rica, 53 931.3ha are covered by these palm dominated swamps, which represent 16.24% of the total surface area covered by wetlands. About 47% of the area covered by yolillales in Nicaragua is under some category of protection, the largest extensions protected by Cerro Silva, Laguna Tale Sulumas and Indio Maiz Nature Reserves. In Costa Rica, 55.5% of the area covered by yolillal is located within protected areas, mainly the Tortuguero National Park, Barra del Colorado Wildlife Refuge and the Sierpe-Thrraba National Wetland. Therefore, in both countries, about half the area covered by these wetlands is not protected by their systems of protection of wilderness areas.

  15. Biodiversity and ecosystem function in species-poor communities: community structure and leaf litter breakdown in a Pacific island stream

    Treesearch

    Jonathan P. Benstead; James G. March; Catherine M. Pringle; Katherine C. Ewel; John W. Short

    2009-01-01

    Pacific island stream communities are species-poor because of the effects of extreme geographic isolation on colonization rates of taxa common to continental regions. The effects of such low species richness on stream ecosystem function are not well understood. Here, we provide data on community structure and leaf litter breakdown rate in a virtually pristine stream on...

  16. Disordered Actomyosin Is Sufficient to Promote Cooperative and Telescopic Contractility

    NASA Astrophysics Data System (ADS)

    Murrell, Michael; Linsmeier, Ian; Banerjee, Shiladitya; Kim, Tae Yoon; Jung, Wonyeong; Oakes, Patrick

    While the molecular interactions between myosin motors and F-actin are well known, the relationship between F-actin organization and myosin-mediated force generation remains poorly understood. Here, we explore the accumulation of myosin-induced stresses within a 2D biomimetic model of the actomyosin cortex, where myosin activity is controlled spatially and temporally using light. By controlling the geometry and the duration of myosin activation, we show that contraction of disordered actomyosin is highly cooperative, telescopic with the activation area and generates a pattern of mechanical stresses consistent with those observed in contractile cells. We quantitatively reproduce these properties using an in vitro isotropic model of the actomyosin cytoskeleton, and explore the physical origins of telescopic contractility in disordered networks using agent-based simulations. NSF CMMI-1525316.

  17. [Rare or little known syndromes in gynecology and obstetrics].

    PubMed

    Dumont, M

    1986-04-01

    The author presents fourty-three years' experience of rare syndromes or those which he considers are poorly understood in the area of gynecologic obstetrics. He briefly reviews: spontaneous post-cesarian perforation of the cecum, post-partum paralysis of the external popliteal sciatic, carpal canal syndrome in pregnacy, meralgia paresthetica in pregnant women, diaphragmatic hernia and its complications during pregnancy and labor, post-mortem cesarian, the "molar lung", early pregnancy and late pregnancy, fulguration and electroshock in pregnant women, the "acrobatic fetus", the rupture of an aneurysm of the splenic artery, geophagia or "pica", extramucous ruptures of the uterus, "virtually pure" type XX familial gonadic dysgenesis with deaf-muteness, gynecologic pathomimesis, genital perihepatitis or Fitz-Hugh-Curtis syndrome, vulvar mammary ectopism, post-hysterectomic pregnancy, recurrent hydramnios, locoregional ecchymatosis.

  18. Genes, molecules and patients—Emerging topics to guide clinical pain research

    PubMed Central

    Sikandar, Shafaq; Patel, Ryan; Patel, Sital; Sikander, Sanam; Bennett, David L.H.; Dickenson, Anthony H.

    2013-01-01

    This review selectively explores some areas of pain research that, until recently, have been poorly understood. We have chosen four topics that relate to clinical pain and we discuss the underlying mechanisms and related pathophysiologies contributing to these pain states. A key issue in pain medicine involves crucial events and mediators that contribute to normal and abnormal pain signaling, but remain unseen without genetic, biomarker or imaging analysis. Here we consider how the altered genetic make-up of familial pains reveals the human importance of channels discovered by preclinical research, followed by the contribution of receptors as stimulus transducers in cold sensing and cold pain. Finally we review recent data on the neuro-immune interactions in chronic pain and the potential targets for treatment in cancer-induced bone pain. PMID:23500200

  19. Use of necrophagous insects as evidence of cadaver relocation: myth or reality?

    PubMed Central

    Gosselin, Matthias; Hedouin, Valéry

    2017-01-01

    The use of insects as indicators of post-mortem displacement is discussed in many texts, courses and TV shows, and several studies addressing this issue have been published. Although the concept is widely cited, it is poorly understood, and only a few forensic cases have successfully applied such a method. The use of necrophagous insects as evidence of cadaver relocation actually involves a wide range of biological aspects. Distribution, microhabitat, phenology, behavioral ecology, and molecular analysis are among the research areas associated with this topic. This article provides the first review of the current knowledge and addresses the potential and limitations of different methods to evaluate their applicability. This work reveals numerous weaknesses and erroneous beliefs as well as many possibilities and research opportunities. PMID:28785513

  20. Visible to near-IR fluorescence from single-digit detonation nanodiamonds: excitation wavelength and pH dependence.

    PubMed

    Reineck, Philipp; Lau, Desmond W M; Wilson, Emma R; Nunn, Nicholas; Shenderova, Olga A; Gibson, Brant C

    2018-02-06

    Detonation nanodiamonds are of vital significance to many areas of science and technology. However, their fluorescence properties have rarely been explored for applications and remain poorly understood. We demonstrate significant fluorescence from the visible to near-infrared spectral regions from deaggregated, single-digit detonation nanodiamonds dispersed in water produced via post-synthesis oxidation. The excitation wavelength dependence of this fluorescence is analyzed in the spectral region from 400 nm to 700 nm as well as the particles' absorption characteristics. We report a strong pH dependence of the fluorescence and compare our results to the pH dependent fluorescence of aromatic hydrocarbons. Our results significantly contribute to the current understanding of the fluorescence of carbon-based nanomaterials in general and detonation nanodiamonds in particular.

  1. Growth of language-related brain areas after foreign language learning.

    PubMed

    Mårtensson, Johan; Eriksson, Johan; Bodammer, Nils Christian; Lindgren, Magnus; Johansson, Mikael; Nyberg, Lars; Lövdén, Martin

    2012-10-15

    The influence of adult foreign-language acquisition on human brain organization is poorly understood. We studied cortical thickness and hippocampal volumes of conscript interpreters before and after three months of intense language studies. Results revealed increases in hippocampus volume and in cortical thickness of the left middle frontal gyrus, inferior frontal gyrus, and superior temporal gyrus for interpreters relative to controls. The right hippocampus and the left superior temporal gyrus were structurally more malleable in interpreters acquiring higher proficiency in the foreign language. Interpreters struggling relatively more to master the language displayed larger gray matter increases in the middle frontal gyrus. These findings confirm structural changes in brain regions known to serve language functions during foreign-language acquisition. Copyright © 2012 Elsevier Inc. All rights reserved.

  2. Oral splint for temporomandibular joint disorders with revolutionary fluid system

    PubMed Central

    Srivastava, Rahul; Jyoti, Bhuvan; Devi, Parvathi

    2013-01-01

    Temporomandibular joint (TMJ) diseases and disorders refer to a complex and poorly understood set of conditions, manifested by pain in the area of the jaw and associated muscles and limitations in the ability to make the normal movements of speech, facial expression, eating, chewing, and swallowing. The conventional soft occlusal splint therapy is a much safer and effective mode of a conservative line of therapy in comparison to the surgical therapy for temporomandibular joint disorders (TMD). The purpose of this article is to review the Aqualizer™, an hydrostatic oral splint, as accurate, effective treatment and differential diagnostic tool in TMD that allow treating the patient's pain quickly and accurately saving valuable treatment time. The review article has been prepared doing a literature review from the world-wide web and pubmed/medline. PMID:24019797

  3. More Than Meets the Eye: The Merging of Perceptual and Conceptual Knowledge in the Anterior Temporal Face Area

    PubMed Central

    Collins, Jessica A.; Koski, Jessica E.; Olson, Ingrid R.

    2016-01-01

    An emerging body of research has supported the existence of a small face sensitive region in the ventral anterior temporal lobe (ATL), referred to here as the “anterior temporal face area”. The contribution of this region in the greater face-processing network remains poorly understood. The goal of the present study was to test the relative sensitivity of this region to perceptual as well as conceptual information about people and objects. We contrasted the sensitivity of this region to that of two highly-studied face-sensitive regions, the fusiform face area (FFA) and the occipital face area (OFA), as well as a control region in early visual cortex (EVC). Our findings revealed that multivoxel activity patterns in the anterior temporal face area contain information about facial identity, as well as conceptual attributes such as one’s occupation. The sensitivity of this region to the conceptual attributes of people was greater than that of posterior face processing regions. In addition, the anterior temporal face area overlaps with voxels that contain information about the conceptual attributes of concrete objects, supporting a generalized role of the ventral ATLs in the identification and conceptual processing of multiple stimulus classes. PMID:27199711

  4. Stormwater contaminant loading following southern California wildfires.

    PubMed

    Stein, Eric D; Brown, Jeffrey S; Hogue, Terri S; Burke, Megan P; Kinoshita, Alicia

    2012-11-01

    Contaminant loading associated with stormwater runoff from recently burned areas is poorly understood, despite the fact that it has the potential to affect downstream water quality. The goal of the present study is to assess regional patterns of runoff and contaminant loading from wildfires in urban fringe areas of southern California. Postfire stormwater runoff was sampled from five wildfires that each burned between 115 and 658 km(2) of natural open space between 2003 and 2009. Between two and five storm events were sampled per site over the first one to two years following the fires for basic constituents, metals, nutrients, total suspended solids, and polycyclic aromatic hydrocarbons (PAHs). Results were compared to data from 16 unburned natural areas and six developed sites. Mean copper, lead, and zinc flux (kg/km(2)) were between 112- and 736-fold higher from burned catchments and total phosphorus was up to 921-fold higher compared to unburned natural areas. Polycyclic aromatic hydrocarbon flux was four times greater from burned areas than from adjacent urban areas. Ash fallout on nearby unburned watersheds also resulted in a threefold increase in metals and PAHs. Attenuation of elevated concentration and flux values appears to be driven mainly by rainfall magnitude. Contaminant loading from burned landscapes has the potential to be a substantial contribution to the total annual load to downstream areas in the first several years following fires. Copyright © 2012 SETAC.

  5. Identification of preoptic sleep neurons using retrograde labelling and gene profiling.

    PubMed

    Chung, Shinjae; Weber, Franz; Zhong, Peng; Tan, Chan Lek; Nguyen, Thuc Nghi; Beier, Kevin T; Hörmann, Nikolai; Chang, Wei-Cheng; Zhang, Zhe; Do, Johnny Phong; Yao, Shenqin; Krashes, Michael J; Tasic, Bosiljka; Cetin, Ali; Zeng, Hongkui; Knight, Zachary A; Luo, Liqun; Dan, Yang

    2017-05-25

    In humans and other mammalian species, lesions in the preoptic area of the hypothalamus cause profound sleep impairment, indicating a crucial role of the preoptic area in sleep generation. However, the underlying circuit mechanism remains poorly understood. Electrophysiological recordings and c-Fos immunohistochemistry have shown the existence of sleep-active neurons in the preoptic area, especially in the ventrolateral preoptic area and median preoptic nucleus. Pharmacogenetic activation of c-Fos-labelled sleep-active neurons has been shown to induce sleep. However, the sleep-active neurons are spatially intermingled with wake-active neurons, making it difficult to target the sleep neurons specifically for circuit analysis. Here we identify a population of preoptic area sleep neurons on the basis of their projection target and discover their molecular markers. Using a lentivirus expressing channelrhodopsin-2 or a light-activated chloride channel for retrograde labelling, bidirectional optogenetic manipulation, and optrode recording, we show that the preoptic area GABAergic neurons projecting to the tuberomammillary nucleus are both sleep active and sleep promoting. Furthermore, translating ribosome affinity purification and single-cell RNA sequencing identify candidate markers for these neurons, and optogenetic and pharmacogenetic manipulations demonstrate that several peptide markers (cholecystokinin, corticotropin-releasing hormone, and tachykinin 1) label sleep-promoting neurons. Together, these findings provide easy genetic access to sleep-promoting preoptic area neurons and a valuable entry point for dissecting the sleep control circuit.

  6. The public's belief about biology.

    PubMed

    Wolpert, L

    2007-02-01

    This short review is concerned with a topic that has been neglected and is still very poorly understood: what the general public think and believe about biology (including health and medicine, and bioethics), and, in particular, about biotechnology.

  7. A Production Function Approach to Regional Environmental-Economic Assessments

    EPA Science Inventory

    Numerous difficulties await those creating regional-scale environmental assessments, from data having inconsistent spatial or temporal scales to poorly understood environmental processes and indicators. Including socioeconomic variables further complicates the situation. In place...

  8. Blaming the helpers: the marginalization of teachers and parents of the urban poor.

    PubMed

    Farber, B A; Azar, S T

    1999-10-01

    The nature and origins of the current tendency toward disparaging parents and teachers of the urban poor are examined. It is suggested that the influence of parents and teachers must be understood in the context of multiple intervening variables. Several explanations are offered for the phenomenon of blame, including the fact that women constitute the great majority of teachers and are often the primary agents of parenting.

  9. Individual Differences Reveal Correlates of Hidden Hearing Deficits

    PubMed Central

    Masud, Salwa; Mehraei, Golbarg; Verhulst, Sarah; Shinn-Cunningham, Barbara G.

    2015-01-01

    Clinical audiometry has long focused on determining the detection thresholds for pure tones, which depend on intact cochlear mechanics and hair cell function. Yet many listeners with normal hearing thresholds complain of communication difficulties, and the causes for such problems are not well understood. Here, we explore whether normal-hearing listeners exhibit such suprathreshold deficits, affecting the fidelity with which subcortical areas encode the temporal structure of clearly audible sound. Using an array of measures, we evaluated a cohort of young adults with thresholds in the normal range to assess both cochlear mechanical function and temporal coding of suprathreshold sounds. Listeners differed widely in both electrophysiological and behavioral measures of temporal coding fidelity. These measures correlated significantly with each other. Conversely, these differences were unrelated to the modest variation in otoacoustic emissions, cochlear tuning, or the residual differences in hearing threshold present in our cohort. Electroencephalography revealed that listeners with poor subcortical encoding had poor cortical sensitivity to changes in interaural time differences, which are critical for localizing sound sources and analyzing complex scenes. These listeners also performed poorly when asked to direct selective attention to one of two competing speech streams, a task that mimics the challenges of many everyday listening environments. Together with previous animal and computational models, our results suggest that hidden hearing deficits, likely originating at the level of the cochlear nerve, are part of “normal hearing.” PMID:25653371

  10. PHYTOASSESSMENT OF ESTUARINE SEDIMENTS

    EPA Science Inventory

    Most sediment quality assessments and quality guidelines are based on the laboratory response of single animal species and benthic animal community composition. The role of plants in this hazard assessment process is poorly understood despite the fact that plant-dominated habitat...

  11. FACTORS INFLUENCING LIGHT-INDUCED MORTALITY OF ENTEROCOCCI IN SEDIMENT SUSPENSIONS

    EPA Science Inventory

    Contamination of recreational waters by pathogenic microorganisms occurs through complex, poorly understood interactions involving variable microbial sources, hydrodynamic transport, arid microbial fate processes. Fecal indicator bacteria such as enterococci have been used to ass...

  12. Plantation management intensity affects belowground carbon and nitrogen storage in northern California

    Treesearch

    K. J. McFarlane; S. H. Schoenholtz; R. F. Powers

    2009-01-01

    Belowground C and N storage is important in maintaining forestproductivity and to CO2 sequestration. How these pools respondto management is poorly understood. We investigated effectsof repeated applications of complete fertilizer and competing...

  13. Predictive Models of Liver Cancer

    EPA Science Inventory

    Predictive models of chemical-induced liver cancer face the challenge of bridging causative molecular mechanisms to adverse clinical outcomes. The latent sequence of intervening events from chemical insult to toxicity are poorly understood because they span multiple levels of bio...

  14. What Can Plasticity Contribute to Insect Responses to Climate Change?

    PubMed

    Sgrò, Carla M; Terblanche, John S; Hoffmann, Ary A

    2016-01-01

    Plastic responses figure prominently in discussions on insect adaptation to climate change. Here we review the different types of plastic responses and whether they contribute much to adaptation. Under climate change, plastic responses involving diapause are often critical for population persistence, but key diapause responses under dry and hot conditions remain poorly understood. Climate variability can impose large fitness costs on insects showing diapause and other life cycle responses, threatening population persistence. In response to stressful climatic conditions, insects also undergo ontogenetic changes including hardening and acclimation. Environmental conditions experienced across developmental stages or by prior generations can influence hardening and acclimation, although evidence for the latter remains weak. Costs and constraints influence patterns of plasticity across insect clades, but they are poorly understood within field contexts. Plastic responses and their evolution should be considered when predicting vulnerability to climate change-but meaningful empirical data lag behind theory.

  15. Activity-Induced Remodeling of Olfactory Bulb Microcircuits Revealed by Monosynaptic Tracing

    PubMed Central

    Arenkiel, Benjamin R.; Hasegawa, Hiroshi; Yi, Jason J.; Larsen, Rylan S.; Wallace, Michael L.; Philpot, Benjamin D.; Wang, Fan; Ehlers, Michael D.

    2011-01-01

    The continued addition of new neurons to mature olfactory circuits represents a remarkable mode of cellular and structural brain plasticity. However, the anatomical configuration of newly established circuits, the types and numbers of neurons that form new synaptic connections, and the effect of sensory experience on synaptic connectivity in the olfactory bulb remain poorly understood. Using in vivo electroporation and monosynaptic tracing, we show that postnatal-born granule cells form synaptic connections with centrifugal inputs and mitral/tufted cells in the mouse olfactory bulb. In addition, newly born granule cells receive extensive input from local inhibitory short axon cells, a poorly understood cell population. The connectivity of short axon cells shows clustered organization, and their synaptic input onto newborn granule cells dramatically and selectively expands with odor stimulation. Our findings suggest that sensory experience promotes the synaptic integration of new neurons into cell type-specific olfactory circuits. PMID:22216277

  16. Reduction in the number of astrocytes and their projections is associated with increased synaptic protein density in the hypothalamus of poorly controlled diabetic rats.

    PubMed

    Lechuga-Sancho, Alfonso M; Arroba, Ana I; Frago, Laura M; García-Cáceres, Cristina; de Célix, Arancha Delgado-Rubín; Argente, Jesús; Chowen, Julie A

    2006-11-01

    Processes under hypothalamic control, such as thermogenesis, feeding behavior, and pituitary hormone secretion, are disrupted in poorly controlled diabetes, but the underlying mechanisms are poorly understood. Because glial cells regulate neurosecretory neurons through modulation of synaptic inputs and function, we investigated the changes in hypothalamic glia in rats with streptozotocin-induced diabetes mellitus. Hypothalamic glial fibrillary acidic protein (GFAP) levels decreased significantly 6 wk after diabetes onset. This was coincident with decreased GFAP immunoreactive surface area, astrocyte number, and the extension of GFAP immunoreactive processes/astrocyte in the arcuate nucleus. Cell death, analyzed by terminal deoxyuridine 5-triphosphate nick-end labeling and ELISA, increased significantly at 4 wk of diabetes. Proliferation, measured by Western blot for proliferating cell nuclear antigen and immunostaining for phosphorylated histone H-3, decreased in the hypothalamus of diabetic rats throughout the study, becoming significantly reduced by 8 wk. Both proliferation and death affected astroctyes because both phosphorylated histone H-3- and terminal deoxyuridine 5-triphosphate nick-end labeling-labeled cells were GFAP positive. Western blot analysis revealed that postsynaptic density protein 95 and the presynaptic proteins synapsin I and synaptotagmin increased significantly at 8 wk of diabetes, suggesting increased hypothalamic synaptic density. Thus, in poorly controlled diabetic rats, there is a decrease in the number of hypothalamic astrocytes that is correlated with modifications in synaptic proteins and possibly synaptic inputs. These morphological changes in the arcuate nucleus could be involved in neurosecretory and metabolic changes seen in diabetic animals.

  17. Unveiling a phytoplankton hotspot at a narrow boundary between coastal and offshore waters

    PubMed Central

    Ribalet, Francois; Marchetti, Adrian; Hubbard, Katherine A.; Brown, Kristina; Durkin, Colleen A.; Morales, Rhonda; Robert, Marie; Swalwell, Jarred E.; Tortell, Philippe D.; Armbrust, E. Virginia

    2010-01-01

    In terrestrial ecosystems, transitional areas between different plant communities (ecotones) are formed by steep environmental gradients and are commonly characterized by high species diversity and primary productivity, which in turn influences the foodweb structure of these regions. Whether comparable zones of elevated diversity and productivity characterize ecotones in the oceans remains poorly understood. Here we describe a previously hidden hotspot of phytoplankton diversity and productivity in a narrow but seasonally persistent transition zone at the intersection of iron-poor, nitrate-rich offshore waters and iron-rich, nitrate-poor coastal waters of the Northeast Pacific Ocean. Novel continuous measurements of phytoplankton cell abundance and composition identified a complex succession of blooms of five distinct size classes of phytoplankton populations within a 100-km–wide transition zone. The blooms appear to be fueled by natural iron enrichment of offshore communities as they are transported toward the coast. The observed succession of phytoplankton populations is likely driven by spatial gradients in iron availability or time since iron enrichment. Regardless of the underlying mechanism, the resulting communities have a strong impact on the regional biogeochemistry as evidenced by the low partial pressure of CO2 and the nearly complete depletion of nutrients. Enhanced phytoplankton productivity and diversity associated with steep environmental gradients are expected wherever water masses with complementary nutrient compositions mix to create a region more favorable for phytoplankton growth. The ability to detect and track these important but poorly characterized marine ecotones is critical for understanding their impact on productivity and ecosystem structure in the oceans. PMID:20823224

  18. Unveiling a phytoplankton hotspot at a narrow boundary between coastal and offshore waters.

    PubMed

    Ribalet, Francois; Marchetti, Adrian; Hubbard, Katherine A; Brown, Kristina; Durkin, Colleen A; Morales, Rhonda; Robert, Marie; Swalwell, Jarred E; Tortell, Philippe D; Armbrust, E Virginia

    2010-09-21

    In terrestrial ecosystems, transitional areas between different plant communities (ecotones) are formed by steep environmental gradients and are commonly characterized by high species diversity and primary productivity, which in turn influences the foodweb structure of these regions. Whether comparable zones of elevated diversity and productivity characterize ecotones in the oceans remains poorly understood. Here we describe a previously hidden hotspot of phytoplankton diversity and productivity in a narrow but seasonally persistent transition zone at the intersection of iron-poor, nitrate-rich offshore waters and iron-rich, nitrate-poor coastal waters of the Northeast Pacific Ocean. Novel continuous measurements of phytoplankton cell abundance and composition identified a complex succession of blooms of five distinct size classes of phytoplankton populations within a 100-km-wide transition zone. The blooms appear to be fueled by natural iron enrichment of offshore communities as they are transported toward the coast. The observed succession of phytoplankton populations is likely driven by spatial gradients in iron availability or time since iron enrichment. Regardless of the underlying mechanism, the resulting communities have a strong impact on the regional biogeochemistry as evidenced by the low partial pressure of CO(2) and the nearly complete depletion of nutrients. Enhanced phytoplankton productivity and diversity associated with steep environmental gradients are expected wherever water masses with complementary nutrient compositions mix to create a region more favorable for phytoplankton growth. The ability to detect and track these important but poorly characterized marine ecotones is critical for understanding their impact on productivity and ecosystem structure in the oceans.

  19. Tracking contaminant flux from aquatic to terrestrial food webs

    EPA Science Inventory

    Aquatic insects provide a critical energy subsidy to riparian food webs, yet their role as vectors of contaminants to terrestrial ecosystems is poorly understood. We investigated aquatic resource utilization and contaminant exposure among riparian invertivores (spiders and herpt...

  20. Asthma and Respiratory Allergic Disease

    EPA Science Inventory

    The pathogenesis of non-communicable diseases such as allergy is complex and poorly understood. The causes of chronic allergic diseases including asthma involve to a large extent, immunomodulation of the adaptive and particularly the innate immune systems and are markedly influen...

  1. A Production Function Approach to Regional Environmental Economic Assessments

    EPA Science Inventory

    Regional-scale environmental assessments require integrating many available types of data having inconsistent spatial or temporal scales. Moreover, the relationships among the environmental variables in the assessment tend to be poorly understood, a situation made even more compl...

  2. AtCHX13 is a plasma membrane K(+) transporter

    USDA-ARS?s Scientific Manuscript database

    Potassium (K+) homeostasis is essential for diverse cellular processes, although how various cation transporters collaborate to maintain a suitable K(+) required for growth and development is poorly understood. The Arabidopsis ("Arabidopsis thaliana") genome contains numerous cation:proton antiporte...

  3. AtCHX13 is a plasma membrane K+ transporter

    USDA-ARS?s Scientific Manuscript database

    Potassium (K+) homeostasis is essential for diverse cellular processes, although how various cation transporters collaborate to maintain a suitable K+ required for growth and development is poorly understood. The Arabidopsis (Arabidopsis thaliana) genome contains numerous cation:proton antiporters (...

  4. The 2011 National Wetland Condition Assessment

    EPA Science Inventory

    The ecological condition of wetland resources across the conterminous United States is poorly understood. To address this issue, the U.S. Environmental Protection Agency (USEPA), in collaboration with states, tribes, and other federal partners, is conducting the first-ever Natio...

  5. Impacts of Human Activity on the Microbial Communities of Devon Island, Canadian High Arctic

    NASA Astrophysics Data System (ADS)

    Bywaters, K. B.; Burton, A. S.; Wallace, S. L.; Glass, B. J.

    2016-09-01

    The impacts of human activities on microbial communities in arctic environments are poorly understood. This project compares the distribution of microbes at the HMP Mars analog site prior to and after human settlement.

  6. AN IMPROVED METHOD FOR DETECTING VIRUSES IN WATER

    EPA Science Inventory

    Enteroviruses are important etiological agents of waterborne disease and are responsible for outbreaks of gastroenteritis. However, the prevalence and occurrence of these pathogens in raw drinking water sources is poorly understood. This is primarily due to the limited methods ...

  7. The mechanisms of intrarenal hemodynamic changes following acute arterial occlusion.

    DOT National Transportation Integrated Search

    1963-10-01

    The hemodynamic response of the kidney to acute arterial occlusion is poorly understood. The purpose of the present study was to determine intrarenal hemodynamic changes in intact and isolated kidneys following arterial occlusion. : The relative role...

  8. Prediction of Membership in Rehabilitation Counseling Professional Associations

    ERIC Educational Resources Information Center

    Phillips, Brian N.; Leahy, Michael J.

    2012-01-01

    Declining membership is a concerning yet poorly understood issue affecting professional associations across disciplines (Bauman, 2008). Rehabilitation counseling association membership is in decline even while number of certified rehabilitation counselors continues to increase (Leahy, 2009). Factors influencing rehabilitation counseling…

  9. The prevalence and causes of autistic spectrum disorders.

    PubMed

    Hainsworth, Terry

    Autism and autistic spectrum disorders are still relatively poorly understood. This article outlines the results of new research into the prevalence of autism and into the causes of the condition and highlights implications for nurses from the findings.

  10. Geochemistry, faunal composition and trophic structure in reducing sediments on the southwest South Georgia margin

    NASA Astrophysics Data System (ADS)

    Bell, James B.; Aquilina, Alfred; Woulds, Clare; Glover, Adrian G.; Little, Crispin T. S.; Reid, William D. K.; Hepburn, Laura E.; Newton, Jason; Mills, Rachel A.

    2016-09-01

    Despite a number of studies in areas of focused methane seepage, the extent of transitional sediments of more diffuse methane seepage, and their influence upon biological communities is poorly understood. We investigated an area of reducing sediments with elevated levels of methane on the South Georgia margin around 250 m depth and report data from a series of geochemical and biological analyses. Here, the geochemical signatures were consistent with weak methane seepage and the role of sub-surface methane consumption was clearly very important, preventing gas emissions into bottom waters. As a result, the contribution of methane-derived carbon to the microbial and metazoan food webs was very limited, although sulfur isotopic signatures indicated a wider range of dietary contributions than was apparent from carbon isotope ratios. Macrofaunal assemblages had high dominance and were indicative of reducing sediments, with many taxa common to other similar environments and no seep-endemic fauna, indicating transitional assemblages. Also similar to other cold seep areas, there were samples of authigenic carbonate, but rather than occurring as pavements or sedimentary concretions, these carbonates were restricted to patches on the shells of Axinulus antarcticus (Bivalvia, Thyasiridae), which is suggestive of microbe-metazoan interactions.

  11. Neotropical Amphibian Declines Affect Stream Ecosystem Properties

    NASA Astrophysics Data System (ADS)

    Connelly, S.; Pringle, C. M.; Bixby, R. J.; Whiles, M. R.; Lips, K. R.; Brenes, R.; Colon-Gaud, J. C.; Kilham, S.; Hunte-Brown, M.

    2005-05-01

    Global declines of amphibians are well documented, yet effects of these dramatic losses on ecosystem structure and function are poorly understood. As part of a larger collaborative project, we compared two upland Panamanian streams. Both streams are biologically and geologically similar; however, one stream (Fortuna) has recently experienced almost complete extirpation of stream-dwelling frogs, while the other (Cope) still has intact populations. We experimentally excluded tadpoles from localized areas in each stream. We then compared chlorophyll a, algal community composition, ash-free dry mass (AFDM), inorganic matter, and insect assemblages in control and exclusion areas. Additionally, we sampled the natural substrate of both streams monthly for chlorophyll a, algal community composition, AFDM, and inorganic matter. At Cope, chlorophyll a, AFDM, and inorganic matter were greater in areas where tadpoles were excluded than in their presence. Numbers of dominant algal species (e.g., Nupela praecipua and Eunotia siolii) were greater in the exclusion versus control treatments. Monthly sampling of natural substrate indicated higher chlorophyll a and AFDM at Cope compared to Fortuna. Our data suggest that stream-dwelling anuran larvae have significant impacts on algal communities. These results also have implications for predicting the relevance of short-term experimental manipulations to long-term, whole-stream processes.

  12. Feral Cats Are Better Killers in Open Habitats, Revealed by Animal-Borne Video

    PubMed Central

    McGregor, Hugh; Legge, Sarah; Jones, Menna E.; Johnson, Christopher N.

    2015-01-01

    One of the key gaps in understanding the impacts of predation by small mammalian predators on prey is how habitat structure affects the hunting success of small predators, such as feral cats. These effects are poorly understood due to the difficulty of observing actual hunting behaviours. We attached collar-mounted video cameras to feral cats living in a tropical savanna environment in northern Australia, and measured variation in hunting success among different microhabitats (open areas, dense grass and complex rocks). From 89 hours of footage, we recorded 101 hunting events, of which 32 were successful. Of these kills, 28% were not eaten. Hunting success was highly dependent on microhabitat structure surrounding prey, increasing from 17% in habitats with dense grass or complex rocks to 70% in open areas. This research shows that habitat structure has a profound influence on the impacts of small predators on their prey. This has broad implications for management of vegetation and disturbance processes (like fire and grazing) in areas where feral cats threaten native fauna. Maintaining complex vegetation cover can reduce predation rates of small prey species from feral cat predation. PMID:26288224

  13. Neuroanatomical correlates of brain-computer interface performance.

    PubMed

    Kasahara, Kazumi; DaSalla, Charles Sayo; Honda, Manabu; Hanakawa, Takashi

    2015-04-15

    Brain-computer interfaces (BCIs) offer a potential means to replace or restore lost motor function. However, BCI performance varies considerably between users, the reasons for which are poorly understood. Here we investigated the relationship between sensorimotor rhythm (SMR)-based BCI performance and brain structure. Participants were instructed to control a computer cursor using right- and left-hand motor imagery, which primarily modulated their left- and right-hemispheric SMR powers, respectively. Although most participants were able to control the BCI with success rates significantly above chance level even at the first encounter, they also showed substantial inter-individual variability in BCI success rate. Participants also underwent T1-weighted three-dimensional structural magnetic resonance imaging (MRI). The MRI data were subjected to voxel-based morphometry using BCI success rate as an independent variable. We found that BCI performance correlated with gray matter volume of the supplementary motor area, supplementary somatosensory area, and dorsal premotor cortex. We suggest that SMR-based BCI performance is associated with development of non-primary somatosensory and motor areas. Advancing our understanding of BCI performance in relation to its neuroanatomical correlates may lead to better customization of BCIs based on individual brain structure. Copyright © 2015 Elsevier Inc. All rights reserved.

  14. Geochemistry, faunal composition and trophic structure in reducing sediments on the southwest South Georgia margin

    PubMed Central

    Aquilina, Alfred; Woulds, Clare; Glover, Adrian G.; Little, Crispin T. S.; Hepburn, Laura E.; Newton, Jason; Mills, Rachel A.

    2016-01-01

    Despite a number of studies in areas of focused methane seepage, the extent of transitional sediments of more diffuse methane seepage, and their influence upon biological communities is poorly understood. We investigated an area of reducing sediments with elevated levels of methane on the South Georgia margin around 250 m depth and report data from a series of geochemical and biological analyses. Here, the geochemical signatures were consistent with weak methane seepage and the role of sub-surface methane consumption was clearly very important, preventing gas emissions into bottom waters. As a result, the contribution of methane-derived carbon to the microbial and metazoan food webs was very limited, although sulfur isotopic signatures indicated a wider range of dietary contributions than was apparent from carbon isotope ratios. Macrofaunal assemblages had high dominance and were indicative of reducing sediments, with many taxa common to other similar environments and no seep-endemic fauna, indicating transitional assemblages. Also similar to other cold seep areas, there were samples of authigenic carbonate, but rather than occurring as pavements or sedimentary concretions, these carbonates were restricted to patches on the shells of Axinulus antarcticus (Bivalvia, Thyasiridae), which is suggestive of microbe–metazoan interactions. PMID:27703692

  15. Spatial clustering of malaria and associated risk factors during an epidemic in a highland area of western Kenya.

    PubMed

    Brooker, Simon; Clarke, Siân; Njagi, Joseph Kiambo; Polack, Sarah; Mugo, Benbolt; Estambale, Benson; Muchiri, Eric; Magnussen, Pascal; Cox, Jonathan

    2004-07-01

    The epidemiology of malaria over small areas remains poorly understood, and this is particularly true for malaria during epidemics in highland areas of Africa, where transmission intensity is low and characterized by acute within and between year variations. We report an analysis of the spatial distribution of clinical malaria during an epidemic and investigate putative risk factors. Active case surveillance was undertaken in three schools in Nandi District, Western Kenya for 10 weeks during a malaria outbreak in May-July 2002. Household surveys of cases and age-matched controls were conducted to collect information on household construction, exposure factors and socio-economic status. Household geographical location and altitude were determined using a hand-held geographical positioning system and landcover types were determined using high spatial resolution satellite sensor data. Among 129 cases identified during the surveillance, which were matched to 155 controls, we identified significant spatial clusters of malaria cases as determined using the spatial scan statistic. Conditional multiple logistic regression analysis showed that the risk of malaria was higher in children who were underweight, who lived at lower altitudes, and who lived in households where drugs were not kept at home. Copyright 2004 Blackwell Publishing Ltd

  16. Regional Variation of CH4 and N2 Production Processes in the Deep Aquifers of an Accretionary Prism

    PubMed Central

    Matsushita, Makoto; Ishikawa, Shugo; Nagai, Kazushige; Hirata, Yuichiro; Ozawa, Kunio; Mitsunobu, Satoshi; Kimura, Hiroyuki

    2016-01-01

    Accretionary prisms are mainly composed of ancient marine sediment scraped from the subducting oceanic plate at a convergent plate boundary. Large amounts of anaerobic groundwater and natural gas, mainly methane (CH4) and nitrogen gas (N2), are present in the deep aquifers associated with an accretionary prism; however, the origins of these gases are poorly understood. We herein revealed regional variations in CH4 and N2 production processes in deep aquifers in the accretionary prism in Southwest Japan, known as the Shimanto Belt. Stable carbon isotopic and microbiological analyses suggested that CH4 is produced through the non-biological thermal decomposition of organic matter in the deep aquifers in the coastal area near the convergent plate boundary, whereas a syntrophic consortium of hydrogen (H2)-producing fermentative bacteria and H2-utilizing methanogens contributes to the significant production of CH4 observed in deep aquifers in midland and mountainous areas associated with the accretionary prism. Our results also demonstrated that N2 production through the anaerobic oxidation of organic matter by denitrifying bacteria is particularly prevalent in deep aquifers in mountainous areas in which groundwater is affected by rainfall. PMID:27592518

  17. Regional Variation of CH4 and N2 Production Processes in the Deep Aquifers of an Accretionary Prism.

    PubMed

    Matsushita, Makoto; Ishikawa, Shugo; Nagai, Kazushige; Hirata, Yuichiro; Ozawa, Kunio; Mitsunobu, Satoshi; Kimura, Hiroyuki

    2016-09-29

    Accretionary prisms are mainly composed of ancient marine sediment scraped from the subducting oceanic plate at a convergent plate boundary. Large amounts of anaerobic groundwater and natural gas, mainly methane (CH4) and nitrogen gas (N2), are present in the deep aquifers associated with an accretionary prism; however, the origins of these gases are poorly understood. We herein revealed regional variations in CH4 and N2 production processes in deep aquifers in the accretionary prism in Southwest Japan, known as the Shimanto Belt. Stable carbon isotopic and microbiological analyses suggested that CH4 is produced through the non-biological thermal decomposition of organic matter in the deep aquifers in the coastal area near the convergent plate boundary, whereas a syntrophic consortium of hydrogen (H2)-producing fermentative bacteria and H2-utilizing methanogens contributes to the significant production of CH4 observed in deep aquifers in midland and mountainous areas associated with the accretionary prism. Our results also demonstrated that N2 production through the anaerobic oxidation of organic matter by denitrifying bacteria is particularly prevalent in deep aquifers in mountainous areas in which groundwater is affected by rainfall.

  18. Inferior Frontal Gyrus Activation Underlies the Perception of Emotions, While Precuneus Activation Underlies the Feeling of Emotions during Music Listening.

    PubMed

    Tabei, Ken-ichi

    2015-01-01

    While music triggers many physiological and psychological reactions, the underlying neural basis of perceived and experienced emotions during music listening remains poorly understood. Therefore, using functional magnetic resonance imaging (fMRI), I conducted a comparative study of the different brain areas involved in perceiving and feeling emotions during music listening. I measured fMRI signals while participants assessed the emotional expression of music (perceived emotion) and their emotional responses to music (felt emotion). I found that cortical areas including the prefrontal, auditory, cingulate, and posterior parietal cortices were consistently activated by the perceived and felt emotional tasks. Moreover, activity in the inferior frontal gyrus increased more during the perceived emotion task than during a passive listening task. In addition, the precuneus showed greater activity during the felt emotion task than during a passive listening task. The findings reveal that the bilateral inferior frontal gyri and the precuneus are important areas for the perception of the emotional content of music as well as for the emotional response evoked in the listener. Furthermore, I propose that the precuneus, a brain region associated with self-representation, might be involved in assessing emotional responses.

  19. Familiarity and Aptness in Metaphor Comprehension.

    PubMed

    Damerall, Alison Whiteford; Kellogg, Ronald T

    2016-01-01

    The career of metaphor hypothesis suggests that novel metaphors are understood through a search for shared features between the topic and vehicle, but with repeated exposure, the figurative meaning is understood directly as a new category is established. The categorization hypothesis argues that instead good or apt metaphors are understood through a categorization process, whether or not they are familiar. Only poor metaphors ever invoke a literal comparison. In Experiment 1, with aptness equated, we found that high familiarity speeded comprehension time over low-familiarity metaphors. In Experiment 2a, providing a literal prime failed to facilitate interpretation of low-familiarity metaphors, contrary to the career of metaphor hypothesis. In Experiment 2b, with familiarity equated, high- and low-aptness metaphors did not differ, contrary to the categorization hypothesis.

  20. Loneliness in psychosis: a systematic review.

    PubMed

    Lim, Michelle H; Gleeson, John F M; Alvarez-Jimenez, Mario; Penn, David L

    2018-03-01

    The aim of the review is to understand the relationships between loneliness and related psychological and social factors in individuals with psychosis. Loneliness is poorly understood in people with psychosis. Given the myriad of social challenges facing individuals with psychosis, these findings can inform psychosocial interventions that specifically target loneliness in this vulnerable group. We adhered to the PRISMA guidelines and systematically reviewed empirical studies that measured loneliness either as a main outcome or as an associated variable in individuals with psychosis. A total of ten studies examining loneliness in people diagnosed with a psychotic disorder were examined. Heterogeneity in the assessment of loneliness was found, and there were contradictory findings on the relationship between loneliness and psychotic symptomatology. In individuals with psychosis, loneliness may be influenced by psychological and social factors such as increased depression, psychosis, and anxiety, poor social support, poor quality of life, more severe internalised stigma and perceived discrimination, and low self-esteem. The relationship between loneliness and psychosis remains poorly understood due to a lack of rigorous studies. Although having strong social relationships is crucial to facilitate recovery from serious mental illness, psychosocial interventions that specifically target loneliness in individuals with psychosis are lacking and sorely needed. Interventions targeting loneliness in those with psychosis will also need to account for additional barriers associated with psychosis (e.g., social skill deficits, impoverished social networks, and negative symptoms).

  1. Dominant control of agriculture and irrigation on urban heat island in India.

    PubMed

    Kumar, Rahul; Mishra, Vimal; Buzan, Jonathan; Kumar, Rohini; Shindell, Drew; Huber, Matthew

    2017-10-25

    As is true in many regions, India experiences surface Urban Heat Island (UHI) effect that is well understood, but the causes of the more recently discovered Urban Cool Island (UCI) effect remain poorly constrained. This raises questions about our fundamental understanding of the drivers of rural-urban environmental gradients and hinders development of effective strategies for mitigation and adaptation to projected heat stress increases in rapidly urbanizing India. Here we show that more than 60% of Indian urban areas are observed to experience a day-time UCI. We use satellite observations and the Community Land Model (CLM) to identify the impact of irrigation and prove for the first time that UCI is caused by lack of vegetation and moisture in non-urban areas relative to cities. In contrast, urban areas in extensively irrigated landscapes generally experience the expected positive UHI effect. At night, UHI warming intensifies, occurring across a majority (90%) of India's urban areas. The magnitude of rural-urban temperature contrasts is largely controlled by agriculture and moisture availability from irrigation, but further analysis of model results indicate an important role for atmospheric aerosols. Thus both land-use decisions and aerosols are important factors governing, modulating, and even reversing the expected urban-rural temperature gradients.

  2. Impact of heterogeneity and socioeconomic factors on individual behavior in decentralized sharing ecosystems.

    PubMed

    Gavaldà-Miralles, Arnau; Choffnes, David R; Otto, John S; Sánchez, Mario A; Bustamante, Fabián E; Amaral, Luís A N; Duch, Jordi; Guimerà, Roger

    2014-10-28

    Tens of millions of individuals around the world use decentralized content distribution systems, a fact of growing social, economic, and technological importance. These sharing systems are poorly understood because, unlike in other technosocial systems, it is difficult to gather large-scale data about user behavior. Here, we investigate user activity patterns and the socioeconomic factors that could explain the behavior. Our analysis reveals that (i) the ecosystem is heterogeneous at several levels: content types are heterogeneous, users specialize in a few content types, and countries are heterogeneous in user profiles; and (ii) there is a strong correlation between socioeconomic indicators of a country and users behavior. Our findings open a research area on the dynamics of decentralized sharing ecosystems and the socioeconomic factors affecting them, and may have implications for the design of algorithms and for policymaking.

  3. Conflicting health information: a critical research need.

    PubMed

    Carpenter, Delesha M; Geryk, Lorie L; Chen, Annie T; Nagler, Rebekah H; Dieckmann, Nathan F; Han, Paul K J

    2016-12-01

    Conflicting health information is increasing in amount and visibility, as evidenced most recently by the controversy surrounding the risks and benefits of childhood vaccinations. The mechanisms through which conflicting information affects individuals are poorly understood; thus, we are unprepared to help people process conflicting information when making important health decisions. In this viewpoint article, we describe this problem, summarize insights from the existing literature on the prevalence and effects of conflicting health information, and identify important knowledge gaps. We propose a working definition of conflicting health information and describe a conceptual typology to guide future research in this area. The typology classifies conflicting information according to four fundamental dimensions: the substantive issue under conflict, the number of conflicting sources (multiplicity), the degree of evidence heterogeneity and the degree of temporal inconsistency. © 2015 The Authors. Health Expectations Published by John Wiley & Sons Ltd.

  4. Treatment of Chagas Cardiomyopathy

    PubMed Central

    Botoni, Fernando A.; Ribeiro, Antonio Luiz P.; Marinho, Carolina Coimbra; Lima, Marcia Maria Oliveira; Nunes, Maria do Carmo Pereira; Rocha, Manoel Otávio C.

    2013-01-01

    Chagas' disease (ChD), caused by the protozoa Trypanosoma cruzi (T. cruzi), was discovered and described by the Brazilian physician Carlos Chagas in 1909. After a century of original description, trypanosomiasis still brings much misery to humanity and is classified as a neglected tropical disease prevalent in underdeveloped countries, particularly in South America. It is an increasing worldwide problem due to the number of cases in endemic areas and the migration of infected subjects to more developed regions, mainly North America and Europe. Despite its importance, chronic chagas cardiomyopathy (CCC) pathophysiology is yet poorly understood, and independently of its social, clinical, and epidemiological importance, the therapeutic approach of CCC is still transposed from the knowledge acquired from other cardiomyopathies. Therefore, the objective of this review is to describe the treatment of Chagas cardiomyopathy with emphasis on its peculiarities. PMID:24350293

  5. Nursing and the barriers to sustainable health care: a literature review.

    PubMed

    Griggs, Chloe; Fernandez, Ana; Callanan, Margie

    2017-12-14

    global warming poses a serious threat to human health, yet healthcare organisations and staff have been relatively slow to engage with sustainable healthcare practices. This review of the literature seeks to frame what is already known about nurses and their views on global warming and sustainable health care. 11 primary research articles were sourced from a search of five mainstream databases. These articles were subject to a basic thematic analysis. six themes were identified: sustainability, endemic blindness to global issues, environmental numbness, social norms, priority assigned to sustainability, and psychology of responsibility and blame. from the literature reviewed, there are a number of social, cultural and psychological barriers that have led to widespread inaction. This article recommends further research to understand the psychological barriers in more depth as this is a poorly understood area.

  6. Towards global patterns in the diversity and community structure of ectomycorrhizal fungi.

    PubMed

    Tedersoo, Leho; Bahram, Mohammad; Toots, Märt; Diédhiou, Abdala G; Henkel, Terry W; Kjøller, Rasmus; Morris, Melissa H; Nara, Kazuhide; Nouhra, Eduardo; Peay, Kabir G; Põlme, Sergei; Ryberg, Martin; Smith, Matthew E; Kõljalg, Urmas

    2012-09-01

    Global species richness patterns of soil micro-organisms remain poorly understood compared to macro-organisms. We use a global analysis to disentangle the global determinants of diversity and community composition for ectomycorrhizal (EcM) fungi-microbial symbionts that play key roles in plant nutrition in most temperate and many tropical forest ecosystems. Host plant family has the strongest effect on the phylogenetic community composition of fungi, whereas temperature and precipitation mostly affect EcM fungal richness that peaks in the temperate and boreal forest biomes, contrasting with latitudinal patterns of macro-organisms. Tropical ecosystems experience rapid turnover of organic material and have weak soil stratification, suggesting that poor habitat conditions may contribute to the relatively low richness of EcM fungi, and perhaps other soil biota, in most tropical ecosystems. For EcM fungi, greater evolutionary age and larger total area of EcM host vegetation may also contribute to the higher diversity in temperate ecosystems. Our results provide useful biogeographic and ecological hypotheses for explaining the distribution of fungi that remain to be tested by involving next-generation sequencing techniques and relevant soil metadata. © 2012 Blackwell Publishing Ltd.

  7. Acoustic measurement and morphological features of organic sediment deposits in combined sewer networks.

    PubMed

    Carnacina, Iacopo; Larrarte, Frédérique; Leonardi, Nicoletta

    2017-04-01

    The performance of sewer networks has important consequences from an environmental and social point of view. Poor functioning can result in flood risk and pollution at a large scale. Sediment deposits forming in sewer trunks might severely compromise the sewer line by affecting the flow field, reducing cross-sectional areas, and increasing roughness coefficients. In spite of numerous efforts, the morphological features of these depositional environments remain poorly understood. The interface between water and sediment remains inefficiently identified and the estimation of the stock of deposit is frequently inaccurate. In part, this is due to technical issues connected to difficulties in collecting accurate field measurements without disrupting existing morphologies. In this paper, results from an extensive field campaign are presented; during the campaign a new survey methodology based on acoustic techniques has been tested. Furthermore, a new algorithm for the detection of the soil-water interface, and therefore for the correct esteem of sediment stocks is proposed. Finally, results in regard to bed topography, and morphological features at two different field sites are presented and reveal that a large variability in bed forms is present along sewer networks. Copyright © 2017 Elsevier Ltd. All rights reserved.

  8. Asthma in Hispanics

    PubMed Central

    Hunninghake, Gary M.; Weiss, Scott T.; Celedón, Juan C.

    2006-01-01

    Hispanic individuals trace their ancestry to countries that were previously under Spanish rule, including Mexico, large parts of Central and South America, and some Caribbean islands. Most—but not all—Hispanics have variable proportions of European, Amerindian, and African ancestry. Hispanics are diverse with regard to many factors, including racial ancestry, country of origin, area of residence, socioeconomic status, education, and access to health care. Recent findings suggest that there is marked variation in the prevalence, morbidity, and mortality of asthma in Hispanics in the United States and in Hispanic America. The reasons for differences in asthma and asthma morbidity among and within Hispanic subgroups are poorly understood but are likely due to the interaction between yet-unidentified genetic variants and other factors, including environmental tobacco smoke exposure, obesity, allergen exposure, and availability of health care. Barriers to optimal management of asthma in Hispanics in the United States and in Hispanic America include inadequate access to health care, suboptimal use of antiinflammatory medications, and lack of reference values for spirometric measures of lung function in many subgroups (e.g., Puerto Ricans). Future studies of asthma in Hispanics should include large samples of subgroups that are well characterized with regard to self-reported ethnicity, country of origin, place of birth, area of residence, and indicators of socioeconomic status. Because Hispanics are disproportionately represented among the poor in the United States, implementation of adequate access to health care and social reforms (e.g., improving housing conditions) would likely have a major impact on reducing asthma morbidity in this population. PMID:16210666

  9. Continuous-variable quantum key distribution protocols over noisy channels.

    PubMed

    García-Patrón, Raúl; Cerf, Nicolas J

    2009-04-03

    A continuous-variable quantum key distribution protocol based on squeezed states and heterodyne detection is introduced and shown to attain higher secret key rates over a noisy line than any other one-way Gaussian protocol. This increased resistance to channel noise can be understood as resulting from purposely adding noise to the signal that is converted into the secret key. This notion of noise-enhanced tolerance to noise also provides a better physical insight into the poorly understood discrepancies between the previously defined families of Gaussian protocols.

  10. Why Leading Consumer Product Companies Develop Proactive Chemical Management Strategies.

    PubMed

    Scruggs, Caroline E; Van Buren, Harry J

    2016-05-01

    Scholars have studied the various pressures that companies face related to socially responsible behavior when stakeholders know the particular social issues under consideration. Many have examined social responsibility in the context of environmental responsibility and the general approaches companies take regarding environmental management. The issue of currently unregulated, but potentially hazardous, chemicals in consumer products is not well understood by the general public, but a number of proactive consumer product companies have voluntarily adopted strategies to minimize use of such chemicals. These companies are exceeding regulatory requirements by restricting from their products chemicals that could harm human or environmental health, despite the fact that these actions are costly. They do not usually advertise the details of their strategies to end consumers. This article uses interviews with senior environmental directors of 20 multinational consumer product companies to investigate why these companies engage in voluntary chemicals management. The authors conclude that the most significant reasons are to achieve a competitive advantage and stay ahead of regulations, manage relationships and maintain legitimacy with stakeholders, and put managerial values into practice. Many of the characteristics related to the case of chemicals management are extendable to other areas of stakeholder management in which risks to stakeholders are either unknown or poorly understood.

  11. Why Leading Consumer Product Companies Develop Proactive Chemical Management Strategies

    PubMed Central

    Scruggs, Caroline E.; Van Buren, Harry J.

    2014-01-01

    Scholars have studied the various pressures that companies face related to socially responsible behavior when stakeholders know the particular social issues under consideration. Many have examined social responsibility in the context of environmental responsibility and the general approaches companies take regarding environmental management. The issue of currently unregulated, but potentially hazardous, chemicals in consumer products is not well understood by the general public, but a number of proactive consumer product companies have voluntarily adopted strategies to minimize use of such chemicals. These companies are exceeding regulatory requirements by restricting from their products chemicals that could harm human or environmental health, despite the fact that these actions are costly. They do not usually advertise the details of their strategies to end consumers. This article uses interviews with senior environmental directors of 20 multinational consumer product companies to investigate why these companies engage in voluntary chemicals management. The authors conclude that the most significant reasons are to achieve a competitive advantage and stay ahead of regulations, manage relationships and maintain legitimacy with stakeholders, and put managerial values into practice. Many of the characteristics related to the case of chemicals management are extendable to other areas of stakeholder management in which risks to stakeholders are either unknown or poorly understood. PMID:27471326

  12. What is the veterinary professional identity? Preliminary findings from web-based continuing professional development in veterinary professionalism.

    PubMed

    Armitage-Chan, E; Maddison, J; May, S A

    2016-03-26

    Professionalism and professional skills are increasingly being incorporated into veterinary curricula; however, lack of clarity in defining veterinary professionalism presents a potential challenge for directing course outcomes that are of benefit to the veterinary professional. An online continuing education course in veterinary professionalism was designed to address a deficit in postgraduate support in this area; as part of this course, delegates of varying practice backgrounds participated in online discussions reflecting on the implications of professional skills for their clinical practice. The discussions surrounding the role of the veterinary professional and reflecting on strengths and weaknesses in professional skills were analysed using narrative methodology, which provided an understanding of the defining skills and attributes of the veterinary professional, from the perspectives of those involved (i.e. how vets understood their own career identity). The veterinary surgeon was understood to be an interprofessional team member, who makes clinical decisions in the face of competing stakeholder needs and works in a complex environment comprising multiple and diverse challenges (stress, high emotions, financial issues, work-life balance). It was identified that strategies for accepting fallibility, and those necessary for establishing reasonable expectations of professional behaviour and clinical ability, are poorly developed. British Veterinary Association.

  13. Predictive Models of Nanotoxicity: Relationship of Physicochemical Properties to Particle Movement Through Biological Barriers

    EPA Science Inventory

    Understanding the linkage between the physicochemical (PC) properties of nanoparticles (NP) and their activation of biological systems is poorly understood, yet fundamental to predicting nanotoxicity, idenitifying mode of actions and developing appropriate and effective regul...

  14. Physiological benefits of nectar-feeding by a predatory beetle

    USDA-ARS?s Scientific Manuscript database

    Extrafloral nectar is an important food source for many animals, including predatory lady beetles (Coleoptera: Coccinellidae), although the physiological benefits of nectar consumption are poorly understood for most consumers. Under laboratory conditions, we confined new females of Coleomegilla macu...

  15. Fructose, high fructose corn syrup, sucrose, and non-alcoholic liver disease

    USDA-ARS?s Scientific Manuscript database

    Nonalcoholic fatty liver disease (NAFLD), formerly called nonalcoholic steatohepatitis, is characterized by hepatic steatosis and abnormal triglyceride accumulation in liver cells. Its etiology, pathophysiology, and pathogenesis are still poorly understood. Some have suggested that the increased in...

  16. Salary, Performance, and Superintendent Turnover

    ERIC Educational Resources Information Center

    Grissom, Jason A.; Mitani, Hajime

    2016-01-01

    Purpose: Superintendent retention is an important goal for many school districts, yet the factors contributing to superintendent turnover are poorly understood. Most prior quantitative studies of superintendent turnover have relied on small, cross-sectional samples, limiting the evidence base. Utilizing longitudinal administrative records from…

  17. New perspectives on microbial community distortion after whole-genome amplification

    EPA Science Inventory

    Whole-genome amplification (WGA) has become an important tool to explore the genomic information of microorganisms in an environmental sample with limited biomass, however potential selective biases during the amplification processes are poorly understood. Here, we describe the e...

  18. Ankle ligament injuries.

    PubMed

    Abbassian, Ali; Thomas, Rhidian

    2008-06-01

    Ankle ligament injuries in the presence or in the absence of fractures are common. They often present a diagnostic challenge, and their management is poorly understood and subject to debate. This article reviews and discusses the current literature on the management and diagnosis of these injuries.

  19. Socio-economic effect on socially-deprived communities of developing drinking water quality problems in arid and semi-arid area of central Rajasthan

    NASA Astrophysics Data System (ADS)

    Husain, I.; Husain, J.; Arif, M.

    2014-09-01

    Rajasthan is well known for its Great Thar desert. Central Rajasthan has an arid to semi-arid environment. The area faces either scarcity of water or poor quality of drinking water. In some areas water is transported 2 km or more, which uses time, energy and money. Rich people have their own sources, which is restricted for use by others. Such conditions are affecting socially-deprived communities, both socially and economically. Groundwater is a major source of drinking water due to the unavailability of surface water. There is a lack of groundwater quality knowledge in the community and the data available is hard to understand by consumers. The CCME Water Quality Index is a tool to simplify the water quality report by rating the water on quality standards. It provides meaningful summaries of overall water quality and trends, which is accessible to non-technical lay people. In the present study the objective is to examine the groundwater quality of six districts (Ajmer, Bhilwara, Pali, Rajasamand, Nagaur and Jodhpur), centrally located in Rajasthan, with arid and semi-arid conditions. CCME WQI is also evaluated to produce quality data in a form to be understood by the community. A total of 4369 groundwater sources in 1680 villages from six districts (76 546 km2) were collected and examined. Results are outlined in the Bureau of Indian Standards (BIS: 10500, 2012) and 2952 sources are unsafe for drinking. According to CCME WQI groundwater of 93 villages is poor, 343 villages are marginal, and 369 villages are fair in quality. Toxicological studies of unsafe drinking water and their remedial measures are also discussed. A tentative correlation between prevailing water-borne diseases and quality parameter has also been shown

  20. Baseline reef health surveys at Bangka Island (North Sulawesi, Indonesia) reveal new threats

    PubMed Central

    Fratangeli, Francesca; Dondi, Nicolò; Segre Reinach, Marco; Serra, Clara; Sweet, Michael J.

    2016-01-01

    Worldwide coral reef decline appears to be accompanied by an increase in the spread of hard coral diseases. However, whether this is the result of increased direct and indirect human disturbances and/or an increase in natural stresses remains poorly understood. The provision of baseline surveys for monitoring coral health status lays the foundations to assess the effects of any such anthropogenic and/or natural effects on reefs. Therefore, the objectives of this present study were to provide a coral health baseline in a poorly studied area, and to investigate possible correlations between coral health and the level of anthropogenic and natural disturbances. During the survey period, we recorded 20 different types of coral diseases and other compromised health statuses. The most abundant were cases of coral bleaching, followed by skeletal deformations caused by pyrgomatid barnacles, damage caused by fish bites, general pigmentation response and galls caused by cryptochirid crabs. Instances of colonies affected by skeletal eroding bands, and sedimentation damage increased in correlation to the level of bio-chemical disturbance and/or proximity to villages. Moreover, galls caused by cryptochirid crabs appeared more abundant at sites affected by blast fishing and close to a newly opened metal mine. Interestingly, in the investigated area the percentage of corals showing signs of ‘common’ diseases such as black band disease, brown band disease, white syndrome and skeletal eroding band disease were relatively low. Nevertheless, the relatively high occurrence of less common signs of compromised coral-related reef health, including the aggressive overgrowth by sponges, deserves further investigation. Although diseases appear relatively low at the current time, this area may be at the tipping point and an increase in activities such as mining may irredeemably compromise reef health. PMID:27812416

  1. Baseline reef health surveys at Bangka Island (North Sulawesi, Indonesia) reveal new threats.

    PubMed

    Ponti, Massimo; Fratangeli, Francesca; Dondi, Nicolò; Segre Reinach, Marco; Serra, Clara; Sweet, Michael J

    2016-01-01

    Worldwide coral reef decline appears to be accompanied by an increase in the spread of hard coral diseases. However, whether this is the result of increased direct and indirect human disturbances and/or an increase in natural stresses remains poorly understood. The provision of baseline surveys for monitoring coral health status lays the foundations to assess the effects of any such anthropogenic and/or natural effects on reefs. Therefore, the objectives of this present study were to provide a coral health baseline in a poorly studied area, and to investigate possible correlations between coral health and the level of anthropogenic and natural disturbances. During the survey period, we recorded 20 different types of coral diseases and other compromised health statuses. The most abundant were cases of coral bleaching, followed by skeletal deformations caused by pyrgomatid barnacles, damage caused by fish bites, general pigmentation response and galls caused by cryptochirid crabs. Instances of colonies affected by skeletal eroding bands, and sedimentation damage increased in correlation to the level of bio-chemical disturbance and/or proximity to villages. Moreover, galls caused by cryptochirid crabs appeared more abundant at sites affected by blast fishing and close to a newly opened metal mine. Interestingly, in the investigated area the percentage of corals showing signs of 'common' diseases such as black band disease, brown band disease, white syndrome and skeletal eroding band disease were relatively low. Nevertheless, the relatively high occurrence of less common signs of compromised coral-related reef health, including the aggressive overgrowth by sponges, deserves further investigation. Although diseases appear relatively low at the current time, this area may be at the tipping point and an increase in activities such as mining may irredeemably compromise reef health.

  2. Accurately Characterizing the Importance of Wave-Particle Interactions in Radiation Belt Dynamics: The Pitfalls of Statistical Wave Representations

    NASA Technical Reports Server (NTRS)

    Murphy, Kyle R.; Mann, Ian R.; Rae, I. Jonathan; Sibeck, David G.; Watt, Clare E. J.

    2016-01-01

    Wave-particle interactions play a crucial role in energetic particle dynamics in the Earths radiation belts. However, the relative importance of different wave modes in these dynamics is poorly understood. Typically, this is assessed during geomagnetic storms using statistically averaged empirical wave models as a function of geomagnetic activity in advanced radiation belt simulations. However, statistical averages poorly characterize extreme events such as geomagnetic storms in that storm-time ultralow frequency wave power is typically larger than that derived over a solar cycle and Kp is a poor proxy for storm-time wave power.

  3. Biodiversity of Jinggangshan Mountain: The Importance of Topography and Geographical Location in Supporting Higher Biodiversity

    PubMed Central

    Liu, Gang; Huang, Fang-Fang; Liu, Jin-Gang; Liao, Wen-Bo; Wang, Ying-Yong; Ren, Si-Jie; Chen, Chun-Quan; Peng, Shao-Lin

    2015-01-01

    Diversity is mainly determined by climate and environment. In addition, topography is a complex factor, and the relationship between topography and biodiversity is still poorly understood. To understand the role of topography, i.e., altitude and slope, in biodiversity, we selected Jinggangshan Mountain (JGM), an area with unique topography, as the study area. We surveyed plant and animal species richness of JGM and compared the biodiversity and the main geographic characteristics of JGM with the adjacent 4 mountains. Gleason’s richness index was calculated to assess the diversity of species. In total, 2958 spermatophyte species, 418 bryophyte species, 355 pteridophyte species and 493 species of vertebrate animals were recorded in this survey. In general, the JGM biodiversity was higher than that of the adjacent mountains. Regarding topographic characteristics, 77% of JGM’s area was in the mid-altitude region and approximately 40% of JGM’s area was in the 10°–20° slope range, which may support more vegetation types in JGM area and make it a biodiversity hotspot. It should be noted that although the impact of topography on biodiversity was substantial, climate is still a more general factor driving the formation and maintenance of higher biodiversity. Topographic conditions can create microclimates, and both climatic and topographic conditions contribute to the formation of high biodiversity in JGM. PMID:25763820

  4. Emotional behavior and arrhythmias induced in cats by hypothalamic stimulation.

    PubMed

    Tashiro, N; Tanaka, T; Fukumoto, T; Hirata, K; Nakao, H

    1985-03-18

    As the relationship between emotional behavior and electrocardiographic (ECG) change induced by hypothalamic stimulation is poorly understood, eighty-four points in various areas within the hypothalamus in conscious cats were stimulated electrically through chronically implanted electrodes, the objective being to clarify the behavior accompanying ECG changes, in particular poststimulus arrhythmias. Forty-one of 84 points elicited behavioral patterns such as defense reaction, pseudo-rage and restlessness (classified as group A), and in twenty-one (51%) of these 41 points arrhythmias occurred after cessation of stimulation. Forty-three of 84 points elicited behavioral patterns including predatory, exploratory and other behavioral responses (classified as group B), and in three (7%) of 43 points, poststimulus arrhythmias followed. Under light anesthesia, stimulations of twofold current intensity were applied at these points, and the incidences of the arrhythmias did not change in either group. The arrhythmia-inducing area in the cases of group A was found to lie dorsal and caudal to the optic chiasma and to extend caudally in the fornix. Three points in the cases of group B were located in the outer area of the aforementioned area. These studies showed that arrhythmias and group A behavior were observed mainly from stimulation of the anterior hypothalamus, whereas stimulation of other areas of the hypothalamus, including the lateral and the posterolateral hypothalamus, produced group B behavior and no arrhythmias.

  5. Perfectionism related to self-reported insomnia severity, but not when controlled for stress and emotion regulation.

    PubMed

    Brand, Serge; Kirov, Roumen; Kalak, Nadeem; Gerber, Markus; Pühse, Uwe; Lemola, Sakari; Correll, Christoph U; Cortese, Samuele; Meyer, Till; Holsboer-Trachsler, Edith

    2015-01-01

    Perfectionism is understood as a set of personality traits such as unrealistically high and rigid standards for performance, fear of failure, and excessive self-criticism. Previous studies showed a direct association between increased perfectionism and poor sleep, though without taking into account possible mediating factors. Here, we tested the hypothesis that perfectionism was directly associated with poor sleep, and that this association collapsed, if mediating factors such as stress and poor emotion regulation were taken into account. Three hundred and forty six young adult students (M=23.87 years) completed questionnaires relating to perfectionism traits, sleep, and psychological functioning such as stress perception, coping with stress, emotion regulation, and mental toughness. Perfectionism was directly associated with poor sleep and poor psychological functioning. When stress, poor coping, and poor emotion regulation were entered in the equation, perfectionism traits no longer contributed substantively to the explanation of poor sleep. Though perfectionism traits seem associated with poor sleep, the direct role of such traits seemed small, when mediating factors such as stress perception and emotion regulation were taken into account.

  6. Perfectionism related to self-reported insomnia severity, but not when controlled for stress and emotion regulation

    PubMed Central

    Brand, Serge; Kirov, Roumen; Kalak, Nadeem; Gerber, Markus; Pühse, Uwe; Lemola, Sakari; Correll, Christoph U; Cortese, Samuele; Meyer, Till; Holsboer-Trachsler, Edith

    2015-01-01

    Background Perfectionism is understood as a set of personality traits such as unrealistically high and rigid standards for performance, fear of failure, and excessive self-criticism. Previous studies showed a direct association between increased perfectionism and poor sleep, though without taking into account possible mediating factors. Here, we tested the hypothesis that perfectionism was directly associated with poor sleep, and that this association collapsed, if mediating factors such as stress and poor emotion regulation were taken into account. Methods Three hundred and forty six young adult students (M=23.87 years) completed questionnaires relating to perfectionism traits, sleep, and psychological functioning such as stress perception, coping with stress, emotion regulation, and mental toughness. Results Perfectionism was directly associated with poor sleep and poor psychological functioning. When stress, poor coping, and poor emotion regulation were entered in the equation, perfectionism traits no longer contributed substantively to the explanation of poor sleep. Conclusion Though perfectionism traits seem associated with poor sleep, the direct role of such traits seemed small, when mediating factors such as stress perception and emotion regulation were taken into account. PMID:25678791

  7. Tectono-magmatic evolution at distal magma-poor rifted margins: insights of the lithospheric breakup at the Australia-Antarctica margins.

    NASA Astrophysics Data System (ADS)

    Gillard, Morgane; Autin, Julia; Manatschal, Gianreto

    2015-04-01

    The discovery of large domains of hyper-extended continental crust and exhumed mantle along many present-day magma-poor rifted margins questions the processes that play during the lithospheric breakup and the onset of seafloor spreading. In particular, the amount of magma and its relation to tectonic structures is yet little understood. Trying to find answers to these questions asks to work at the most distal parts of rifted margins where the transition from rifting to steady state seafloor spreading occurred. The Australian-Antarctic conjugated margins provide an excellent study area. Indeed, the central sector of the Great Australian Bight/Wilkes Land developed in a magma-poor probably ultra-slow setting and displays a complex and not yet well understood Ocean-Continent Transition (OCT). This distal area is well imaged by numerous high quality seismic lines covering the whole OCT and the steady-state oceanic crust. The deformation recorded in the sedimentary units along these margins highlights a migration of the deformation toward the ocean and a clear polyphase evolution. In particular, the observation that each tectono-sedimentary unit downlaps oceanwards onto the basement suggests that final rifting is associated with the creation of new depositional ground under conditions that are not yet those of a steady state oceanic crust. These observations lead to a model of evolution for these distal margins implying the development of multiple detachment systems organizing out-of-sequence, each new detachment fault developing into the previously exhumed basement. This spatial and temporal organization of fault systems leads to a final symmetry of exhumed domains at both conjugated margins. Magma appears to gradually increase during the margin development and is particularly present in the more distal domain where we can observe clear magma/fault interactions. We propose that the evolution of such rifted margins is linked to cycles of delocalisation/re-localisation of the deformation which could be mainly influenced by magma and by the decoupling between the upper brittle deformation and the asthenospheric uplift. In this context, the lithospheric breakup appears to be triggered by progressive syn-extensional thermal and magmatic weakening. However, the observation of continentward dipping reflectors interpreted as flip-flop detachment systems suggests that the localisation of the spreading centre and the onset of the steady state oceanic spreading will not be necessarily associated with a clear magmatic oceanic crust. In case of a low magmatic budget we can rather observe the onset of steady state amagmatic oceanic spreading, similar to what is expected at ultra-slow spreading ridges. This model of evolution (Gillard, 2014, PhD thesis) could well explain the fact that most magma-poor margins display symmetric exhumed domains on conjugate margins. However it raises the question of the nature of magnetic anomalies in ocean-continent transitions and their value for the interpretation of the kinematic evolution of conjugate rifted margins.

  8. Mineral potential for incompatible element deposits hosted in pegmatites, alkaline rocks, and carbonatites in the Islamic Republic of Mauritania (phase V, deliverable 87): Chapter Q in Second projet de renforcement institutionnel du secteur minier de la République Islamique de Mauritanie (PRISM-II)

    USGS Publications Warehouse

    Taylor, Cliff D.; Giles, Stuart A.

    2015-01-01

    USGS review of PRISM-I data suggests that there is abundant documentation of the Bou Naga alkaline complex and to a lesser degree, the Guelb er Richat carbonatite complex, but that all other occurrences of U, Th, REE, and associated elements are poorly described, and poorly understood (Taylor, 2007)

  9. Atherosclerosis associated with pericardial effusion in a central bearded dragon (Pogona vitticeps).

    PubMed

    Schilliger, Lionel; Lemberger, Karin; Chai, Norin; Bourgeois, Aude; Charpentier, Maud

    2010-09-01

    Atherosclerosis is a common disease in pet birds, particularly in psittacines, and is frequently found when performing postmortem examinations on adult and old dogs, in which it is mainly associated with endocrine diseases, such as hypothyroidism and diabetes mellitus. However, atherosclerosis is poorly documented in reptiles and consequently poorly understood. In the current case report, atherosclerosis and pericardial effusion were diagnosed in a 2-year-old male central bearded dragon (Pogona vitticeps) based on ultrasound visualization, necropsy, and histologic examination.

  10. A landscape-based reconnaissance survey of estrogenic activity in streams of the upper Potomac, upper James, and Shenandoah Rivers, USA.

    PubMed

    Young, John; Iwanowicz, Luke; Sperry, Adam; Blazer, Vicki

    2014-09-01

    Endocrine-disrupting compounds (EDCs) are becoming of increasing concern in waterways of the USA and worldwide. What remains poorly understood, however, is how prevalent these emerging contaminants are in the environment and what methods are best able to determine landscape sources of EDCs. We describe the development of a spatially structured sampling design and a reconnaissance survey of estrogenic activity along gradients of land use within sub-watersheds. We present this example as a useful approach for state and federal agencies with an interest in identifying locations potentially impacted by EDCs that warrant more intensive, focused research. Our study confirms the importance of agricultural activities on levels of a measured estrogenic equivalent (E2Eq) and also highlights the importance of other potential sources of E2Eq in areas where intensive agriculture is not the dominant land use. Through application of readily available geographic information system (GIS) data, coupled with spatial statistical analysis, we demonstrate the correlation of specific land use types to levels of estrogenic activity across a large area in a consistent and unbiased manner.

  11. Contrasting Specializations for Facial Motion Within the Macaque Face-Processing System

    PubMed Central

    Fisher, Clark; Freiwald, Winrich A.

    2014-01-01

    SUMMARY Facial motion transmits rich and ethologically vital information [1, 2], but how the brain interprets this complex signal is poorly understood. Facial form is analyzed by anatomically distinct face patches in the macaque brain [3, 4], and facial motion activates these patches and surrounding areas [5, 6]. Yet it is not known whether facial motion is processed by its own distinct and specialized neural machinery, and if so, what that machinery’s organization might be. To address these questions, we used functional magnetic resonance imaging (fMRI) to monitor the brain activity of macaque monkeys while they viewed low- and high-level motion and form stimuli. We found that, beyond classical motion areas and the known face patch system, moving faces recruited a heretofore-unrecognized face patch. Although all face patches displayed distinctive selectivity for face motion over object motion, only two face patches preferred naturally moving faces, while three others preferred randomized, rapidly varying sequences of facial form. This functional divide was anatomically specific, segregating dorsal from ventral face patches, thereby revealing a new organizational principle of the macaque face-processing system. PMID:25578903

  12. Effects of Different Regeneration Scenarios and Fertilizer Treatments on Soil Microbial Ecology in Reclaimed Opencast Mining Areas on the Loess Plateau, China

    PubMed Central

    Li, Junjian; Zheng, Yuanming; Yan, Junxia; Li, Hongjian; Wang, Xiang; He, Jizheng; Ding, Guangwei

    2013-01-01

    The soil microbial community in reclaimed mining areas is fundamental to vegetative establishment. However, how this community responds to different regeneration scenarios and fertilizer treatments is poorly understood. This research evaluated plant and soil microbial communities from different regeneration scenarios and different fertilizer treatments. Regeneration scenarios significantly influenced soil bacterial, archaeal, and fungal rDNA abundance. The ratios of fungi to bacteria or archaea were increased with fertilizer application. The diversity of both plants and microbes was lowest in Lotus corniculatus grasslands. Regeneration scenario, fertilizer treatment, and their interaction influenced soil microbial richness, diversity and evenness indices. Labile carbon pool 2 was a significant factor affected plant and microbe communities in July, suggesting that plants and microbes may be competing for nutrients. The higher ratios of positive to negative association were found in soil bacteria and total microbe than in archaea and fungi. Stronger clustering of microbial communities from the same regeneration scenario indicated that the vegetative composition of regeneration site may have a greater influence on soil microbial communities than fertilizer treatment. PMID:23658819

  13. Aging of Cerebral White Matter

    PubMed Central

    Liu, Huan; Yang, Yuanyuan; Xia, Yuguo; Zhu, Wen; Leak, Rehana K.; Wei, Zhishuo; Wang, Jianyi; Hu, Xiaoming

    2016-01-01

    White matter (WM) occupies a large volume of the human cerebrum and is mainly composed of myelinated axons and myelin-producing glial cells. The myelinated axons within WM are the structural foundation for efficient neurotransmission between cortical and subcortical areas. Similar to neuron-enriched gray matter areas, WM undergoes a series of changes during the process of aging. WM malfunction can induce serious neurobehavioral and cognitive impairments. Thus, age-related changes in WM may contribute to the functional decline observed in the elderly. In addition, aged WM becomes more susceptible to neurological disorders, such as stroke, traumatic brain injury (TBI), and neurodegeneration. In this review, we summarize the structural and functional alterations of WM in natural aging and speculate on the underlying mechanisms. We also discuss how age-related WM changes influence the progression of various brain disorders, including ischemic and hemorrhagic stroke, TBI, Alzheimer’s disease, and Parkinson’s disease. Although the physiology of WM is still poorly understood relative to gray matter, WM is a rational therapeutic target for a number of neurological and psychiatric conditions. PMID:27865980

  14. Crossmodal association of auditory and visual material properties in infants.

    PubMed

    Ujiie, Yuta; Yamashita, Wakayo; Fujisaki, Waka; Kanazawa, So; Yamaguchi, Masami K

    2018-06-18

    The human perceptual system enables us to extract visual properties of an object's material from auditory information. In monkeys, the neural basis underlying such multisensory association develops through experience of exposure to a material; material information could be processed in the posterior inferior temporal cortex, progressively from the high-order visual areas. In humans, however, the development of this neural representation remains poorly understood. Here, we demonstrated for the first time the presence of a mapping of the auditory material property with visual material ("Metal" and "Wood") in the right temporal region in preverbal 4- to 8-month-old infants, using near-infrared spectroscopy (NIRS). Furthermore, we found that infants acquired the audio-visual mapping for a property of the "Metal" material later than for the "Wood" material, since infants form the visual property of "Metal" material after approximately 6 months of age. These findings indicate that multisensory processing of material information induces the activation of brain areas related to sound symbolism. Our findings also indicate that the material's familiarity might facilitate the development of multisensory processing during the first year of life.

  15. A mobile precursor determines protein resistance on nanostructured surfaces.

    PubMed

    Wang, Kang; Chen, Ye; Gong, Xiangjun; Xia, Jianlong; Zhao, Junpeng; Shen, Lei

    2018-05-09

    Biomaterials are often engineered with nanostructured surfaces to control interactions with proteins and thus regulate their biofunctions. However, the mechanism of how nanostructured surfaces resist or attract proteins together with the underlying design rules remains poorly understood at a molecular level, greatly limiting attempts to develop high-performance biomaterials and devices through the rational design of nanostructures. Here, we study the dynamics of nonspecific protein adsorption on block copolymer nanostructures of varying adhesive domain areas in a resistant matrix. Using surface plasmon resonance and single molecule tracking techniques, we show that weakly adsorbed proteins with two-dimensional diffusivity are critical precursors to protein resistance on nanostructured surfaces. The adhesive domain areas must be more than tens or hundreds of times those of the protein footprints to slow down the 2D-mobility of the precursor proteins for their irreversible adsorption. This precursor model can be used to quantitatively analyze the kinetics of nonspecific protein adsorption on nanostructured surfaces. Our method is applicable to precisely manipulate protein adsorption and resistance on various nanostructured surfaces, e.g., amphiphilic, low-surface-energy, and charged nanostructures, for the design of protein-compatible materials.

  16. Area-specific development of distinct projection neuron subclasses is regulated by postnatal epigenetic modifications

    PubMed Central

    Harb, Kawssar; Magrinelli, Elia; Nicolas, Céline S; Lukianets, Nikita; Frangeul, Laura; Pietri, Mariel; Sun, Tao; Sandoz, Guillaume; Grammont, Franck; Jabaudon, Denis; Studer, Michèle; Alfano, Christian

    2016-01-01

    During cortical development, the identity of major classes of long-distance projection neurons is established by the expression of molecular determinants, which become gradually restricted and mutually exclusive. However, the mechanisms by which projection neurons acquire their final properties during postnatal stages are still poorly understood. In this study, we show that the number of neurons co-expressing Ctip2 and Satb2, respectively involved in the early specification of subcerebral and callosal projection neurons, progressively increases after birth in the somatosensory cortex. Ctip2/Satb2 postnatal co-localization defines two distinct neuronal subclasses projecting either to the contralateral cortex or to the brainstem suggesting that Ctip2/Satb2 co-expression may refine their properties rather than determine their identity. Gain- and loss-of-function approaches reveal that the transcriptional adaptor Lmo4 drives this maturation program through modulation of epigenetic mechanisms in a time- and area-specific manner, thereby indicating that a previously unknown genetic program postnatally promotes the acquisition of final subtype-specific features. DOI: http://dx.doi.org/10.7554/eLife.09531.001 PMID:26814051

  17. Aging of cerebral white matter.

    PubMed

    Liu, Huan; Yang, Yuanyuan; Xia, Yuguo; Zhu, Wen; Leak, Rehana K; Wei, Zhishuo; Wang, Jianyi; Hu, Xiaoming

    2017-03-01

    White matter (WM) occupies a large volume of the human cerebrum and is mainly composed of myelinated axons and myelin-producing glial cells. The myelinated axons within WM are the structural foundation for efficient neurotransmission between cortical and subcortical areas. Similar to neuron-enriched gray matter areas, WM undergoes a series of changes during the process of aging. WM malfunction can induce serious neurobehavioral and cognitive impairments. Thus, age-related changes in WM may contribute to the functional decline observed in the elderly. In addition, aged WM becomes more susceptible to neurological disorders, such as stroke, traumatic brain injury (TBI), and neurodegeneration. In this review, we summarize the structural and functional alterations of WM in natural aging and speculate on the underlying mechanisms. We also discuss how age-related WM changes influence the progression of various brain disorders, including ischemic and hemorrhagic stroke, TBI, Alzheimer's disease, and Parkinson's disease. Although the physiology of WM is still poorly understood relative to gray matter, WM is a rational therapeutic target for a number of neurological and psychiatric conditions. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Human Genomic Signatures of Brain Oscillations During Memory Encoding.

    PubMed

    Berto, Stefano; Wang, Guang-Zhong; Germi, James; Lega, Bradley C; Konopka, Genevieve

    2018-05-01

    Memory encoding is an essential step for all learning. However, the genetic and molecular mechanisms underlying human memory encoding remain poorly understood, and how this molecular framework permits the emergence of specific patterns of brain oscillations observed during mnemonic processing is unknown. Here, we directly compare intracranial electroencephalography recordings from the neocortex in individuals performing an episodic memory task with human gene expression from the same areas. We identify genes correlated with oscillatory memory effects across 6 frequency bands. These genes are enriched for autism-related genes and have preferential expression in neurons, in particular genes encoding synaptic proteins and ion channels, supporting the idea that the genes regulating voltage gradients are involved in the modulation of oscillatory patterns during successful memory encoding across brain areas. Memory-related genes are distinct from those correlated with other forms of cognitive processing and resting state fMRI. These data are the first to identify correlations between gene expression and active human brain states as well as provide a molecular window into memory encoding oscillations in the human brain.

  19. DFLOWZ: A free program to evaluate the area potentially inundated by a debris flow

    NASA Astrophysics Data System (ADS)

    Berti, M.; Simoni, A.

    2014-06-01

    The transport and deposition mechanisms of debris flows are still poorly understood due to the complexity of the interactions governing the behavior of water-sediment mixtures. Empirical-statistical methods can therefore be used, instead of more sophisticated numerical methods, to predict the depositional behavior of these highly dangerous gravitational movements. We use widely accepted semi-empirical scaling relations and propose an automated procedure (DFLOWZ) to estimate the area potentially inundated by a debris flow event. Beside a digital elevation model (DEM), the procedure has only two input requirements: the debris flow volume and the possible flow-path. The procedure is implemented in Matlab and a Graphical User Interface helps to visualize initial conditions, flow propagation and final results. Different hypothesis about the depositional behavior of an event can be tested together with the possible effect of simple remedial measures. Uncertainties associated to scaling relations can be treated and their impact on results evaluated. Our freeware application aims to facilitate and speed up the process of susceptibility mapping. We discuss limits and advantages of the method in order to inform inexperienced users.

  20. A landscape-based reconnaissance survey of estrogenicactivity in streams of the upper Potomac, upper James,and Shenandoah Rivers, USA

    USGS Publications Warehouse

    Young, John A.; Iwanowicz, Luke R.; Sperry, Adam J.; Blazer, Vicki

    2014-01-01

    Endocrine-disrupting compounds (EDCs) are becoming of increasing concern in waterways of the USA and worldwide. What remains poorly understood, however, is how prevalent these emerging contaminants are in the environment and what methods are best able to determine landscape sources of EDCs. We describe the development of a spatially structured sampling design and a reconnaissance survey of estrogenic activity along gradients of land use within sub-watersheds.We present this example as a useful approach for state and federal agencies with an interest in identifying locations potentially impacted by EDCs that warrant more intensive, focused research. Our study confirms the importance of agricultural activities on levels of a measured estrogenic equivalent (E2Eq) and also highlights the importance of other potential sources of E2Eq in areas where intensive agriculture is not the dominant land use. Through application of readily available geographic information system (GIS) data, coupled with spatial statistical analysis, we demonstrate the correlation of specific land use types to levels of estrogenic activity across a large area in a consistent and unbiased manner.

  1. Innovativeness and the effects of urbanization on risk-taking behaviors in wild Barbados birds.

    PubMed

    Ducatez, Simon; Audet, Jean-Nicolas; Rodriguez, Jordi Ros; Kayello, Lima; Lefebvre, Louis

    2017-01-01

    The effects of urbanization on avian cognition remain poorly understood. Risk-taking behaviors like boldness, neophobia and flight distance are thought to affect opportunism and innovativeness, and should also vary with urbanization. Here, we investigate variation in risk-taking behaviors in the field in an avian assemblage of nine species that forage together in Barbados and for which innovation rate is known from previous work. We predicted that birds from highly urbanized areas would show more risk-taking behavior than conspecifics from less urbanized parts of the island and that the differences would be strongest in the most innovative of the species. Overall, we found that urban birds are bolder, less neophobic and have shorter flight distances than their less urbanized conspecifics. Additionally, we detected between-species differences in the effect of urbanization on flight distance, more innovative species showing smaller differences in flight distance between areas. Our results suggest that, within successful urban colonizers, species differences in innovativeness may affect the way species change their risk-taking behaviors in response to the urban environment.

  2. Airway epithelial repair in health and disease: Orchestrator or simply a player?

    PubMed

    Iosifidis, Thomas; Garratt, Luke W; Coombe, Deirdre R; Knight, Darryl A; Stick, Stephen M; Kicic, Anthony

    2016-04-01

    Epithelial cells represent the most important surface of contact in the body and form the first line of defence of the body to external environment. Consequently, epithelia have numerous roles in order to maintain a homeostatic defence barrier. Although the epithelium has been extensively studied over several decades, it remains the focus of new research, indicating a lack of understanding that continues to exist around these cells in specific disease settings. Importantly, evidence is emerging that airway epithelial cells in particular have varied complex functions rather than simple passive roles. One area of current interest is its role following injury. In particular, the epithelial-specific cellular mechanisms regulating their migration during wound repair remain poorly understood and remain an area that requires much needed investigation. A better understanding of the physiological, cellular and molecular wound repair mechanisms could assist in elucidating pathological processes that contribute to airway epithelial pathology. This review attempts to highlight migration-specific and cell-extracellular matrix (ECM) aspects of repair used by epithelial cells under normal and disease settings, in the context of human airways. © 2016 Asian Pacific Society of Respirology.

  3. USING MOLECULAR PROBES TO STUDY INTERFACIAL REDOX REACTION AT FE-BEARING SMECTITES

    EPA Science Inventory

    The interfacial electron transfer of clay-water systems has a wide range of significance in geochemical and biogeochernical environments. However the mechanism of interfacial electron transport is poorly understood. The electron transfer mechanism at the solid-water interfaces of...

  4. Larval fish distribution in the St. Louis River estuary

    EPA Science Inventory

    Our objective was to determine what study design, environmental, and habitat variables contribute to the distribution and abundance of larval fish in the St. Louis River estuary. Larval fish habitat associations are poorly understood in Great Lakes coastal wetlands, yet critical ...

  5. Post-traumatic unilateral plantar hyperhidrosis.

    PubMed

    Eren, Y; Yavasoglu, N G; Comoglu, S S

    2016-02-01

    Localized unilateral hyperhidrosis is rare and poorly understood, sometimes stemming from trauma. Feet, quite vulnerable to trauma are affected by disease-mediated plantar hyperhidrosis, usually bilaterally. This report describes partial hyperhidrosis developing post-traumatically on the left plantar region of a 52-year-old male.

  6. Predator-prey interaction reveals local effects of high-altitude insect migration

    USDA-ARS?s Scientific Manuscript database

    High-altitude nocturnal insect migrations represent significant pulses of resources, yet are difficult to study and poorly understood. Predator-prey interactions, specifically migratory moth consumption by high-flying bats, potentially reveal flows of migratory insects across a landscape. In North...

  7. Assessing Effects of Pesticides on the Bee Immune System

    EPA Science Inventory

    Populations of some managed and wild pollinators are in decline as a result of multiple interacting factors including parasites, disease, poor nutrition and pesticides. The role that diminished immunity plays in these declines is not understood. The U.S. Environmental Protection ...

  8. DISSECTING COLONY DEVELOPMENT OF NEUROSPORA CRASSA USING mRNA PROFILING AND COMPARTATIVE GENOMICS APPROACHES

    USDA-ARS?s Scientific Manuscript database

    Colony development, which includes hyphal extension, branching, anastomosis and asexual sporulation are fundamental aspects of the lifecycle of filamentous fungi; genetic mechanisms underlying these phenomena are poorly understood. We conducted transcriptional profiling during colony development of...

  9. USEPA RESEARCH ON FISH - HABITAT RELATIONSHIPS IN GREAT LAKES COASTAL MARSHES

    EPA Science Inventory

    Despite numerous studies documenting fish use of particular habitat elements, the role of habitat mosaics in supporting wetland fishes is poorly understood. USEPA's Mid-Continent Ecology Division has initiated research to identify relationships of fish and habitat in coastal mars...

  10. A Cellular Game of Telephone: Trans Tissue Reprogramming of Responses to Toxic Stimuli

    EPA Science Inventory

    Exposure to air pollution is a leading cause of cardiopulmonary morbidity and mortality; however, while these effects outside the lung have been associated with aberrant oxidative stress and inflammation, the underlying molecular mechanisms are poorly understood. We hypothesized ...

  11. Cellular Plasticity in the Diabetic Myocardium

    DTIC Science & Technology

    2017-09-01

    demonstrated that obese diabetic db/db mice in a C57Bl6J background exhibit cardiac remodeling, associated with modest ventricular dilation...HFpEF, the cellular basis for fibrotic remodeling of the ventricle is poorly understood. Metabolic diseases (such as obesity and diabetes) are

  12. Reduce Confusion about Diffusion.

    ERIC Educational Resources Information Center

    Hebrank, Mary R.

    1997-01-01

    Presents activities that allow students to explore the fundamental but poorly understood concept of diffusion by appealing to their kinesthetic senses first, then challenging their analytical skills as they try to deduce the mathematical principle involved. Presents a computer simulation of diffusion and discusses diffusion's limitations and…

  13. INTERNATIONAL CHILDHOOD CANCER COHORT CONSORTIUM (Journal Article)

    EPA Science Inventory

    Childhood cancers are rare conditions whose etiology is poorly understood. There is evidence that for some, the causal pathway may commence in utero or during peri-conception. One traditional epidemiologic approach to the study of rare diseases is the use of a retrospective cas...

  14. A Multilevel Investigation of Neighborhood Effects on Parental Warmth

    ERIC Educational Resources Information Center

    Tendulkar, Shalini A.; Buka, Stephen; Dunn, Erin C.; Subramanian, S. V.; Koenen, Karestan C.

    2010-01-01

    Although researchers recognize that social contexts shape parenting behaviors, the relationship between neighborhood environment and parenting remains poorly understood. To address this gap, we investigated the associations between compositional and contextual (structural, social, and safety) characteristics of neighborhoods and parental warmth.…

  15. Origins of Brain Tumor Macrophages.

    PubMed

    De Palma, Michele

    2016-12-12

    The ontogeny of brain-tumor-associated macrophages is poorly understood. New findings indicate that both resident microglia and blood-derived monocytes generate the pool of macrophages that infiltrate brain tumors of either primary or metastatic origin. Copyright © 2016 Elsevier Inc. All rights reserved.

  16. Pollinator guilds respond differently to urban habitat fragmentation in a oak-savannah ecosystem

    USDA-ARS?s Scientific Manuscript database

    Habitat fragmentation is widely thought to threaten biodiversity. However, response of pollinators to habitat fragmentation is still poorly understood, as pollinator communities are notoriously spatially variable. We investigated pollinator community structure in a highly fragmented oak-savannah ec...

  17. Effects of ecosystem development on benthic secondary production in restored and created mangrove habitats

    EPA Science Inventory

    Wetland creation, enhancement, and restoration activities are commonly implemented to compensate for wetland loss or degradation. However, functional equivalence in restored and created wetland habitats is often poorly understood. In estuarine habitats, changes in habitat qualit...

  18. Ozone-Induced Metabolic Impairment is Attenuated in Adrenalectomized Wistar Kyoto Rats

    EPA Science Inventory

    Rationale: Air pollutants have been linked to increased incidence of metabolic syndrome however the mechanisms are poorly understood. We have recently shown that ozone exposure induces significant hyperglycemia together with elevated serum leptin and epinephrine in the Wistar Ky...

  19. THE INTERACTION OF VAPOUR PHASE ORGANIC COMPOUNDS WITH INDOOR SINKS

    EPA Science Inventory

    The interaction of indoor air pollutants with interior surfaces (i.e., sinks) is a well known, but poorly understood, phenomenon. Studies have shown that re-emissions of adsorbed organic vapours can contribute to elevated concentrations of organics in indoor environments. Researc...

  20. Preschool Executive Functioning Abilities Predict Early Mathematics Achievement

    ERIC Educational Resources Information Center

    Clark, Caron A. C.; Pritchard, Verena E.; Woodward, Lianne J.

    2010-01-01

    Impairments in executive function have been documented in school-age children with mathematical learning difficulties. However, the utility and specificity of preschool executive function abilities in predicting later mathematical achievement are poorly understood. This study examined linkages between children's developing executive function…

  1. HYDRAULIC REDISTRIBUTION IN THE PACIFIC NORTHWEST: TWEAKING THE SYSTEM

    EPA Science Inventory

    Hydraulic redistribution (HR) has recently been documented in Pacific Northwest forests, but the controls governing this process and its importance to shallow-rooted species are poorly understood. Our objective in this study was to manipulate the soil-root system to tease apart ...

  2. REVIEW OF QUANTITATIVE STANDARDS AND GUIDELINES FOR FUNGI IN INDOOR AIR

    EPA Science Inventory

    Exposure to fungal aerosols clearly causes human disease. However, methods for assessing exposure remain poorly understood, and guidelines for interpreting data are often contradictory. The purposes of this paper are to review and compare existing guidelines for indoor airborne...

  3. Individual differences reveal correlates of hidden hearing deficits.

    PubMed

    Bharadwaj, Hari M; Masud, Salwa; Mehraei, Golbarg; Verhulst, Sarah; Shinn-Cunningham, Barbara G

    2015-02-04

    Clinical audiometry has long focused on determining the detection thresholds for pure tones, which depend on intact cochlear mechanics and hair cell function. Yet many listeners with normal hearing thresholds complain of communication difficulties, and the causes for such problems are not well understood. Here, we explore whether normal-hearing listeners exhibit such suprathreshold deficits, affecting the fidelity with which subcortical areas encode the temporal structure of clearly audible sound. Using an array of measures, we evaluated a cohort of young adults with thresholds in the normal range to assess both cochlear mechanical function and temporal coding of suprathreshold sounds. Listeners differed widely in both electrophysiological and behavioral measures of temporal coding fidelity. These measures correlated significantly with each other. Conversely, these differences were unrelated to the modest variation in otoacoustic emissions, cochlear tuning, or the residual differences in hearing threshold present in our cohort. Electroencephalography revealed that listeners with poor subcortical encoding had poor cortical sensitivity to changes in interaural time differences, which are critical for localizing sound sources and analyzing complex scenes. These listeners also performed poorly when asked to direct selective attention to one of two competing speech streams, a task that mimics the challenges of many everyday listening environments. Together with previous animal and computational models, our results suggest that hidden hearing deficits, likely originating at the level of the cochlear nerve, are part of "normal hearing." Copyright © 2015 the authors 0270-6474/15/352161-12$15.00/0.

  4. Biogeographical disparity in the functional diversity and redundancy of corals.

    PubMed

    McWilliam, Mike; Hoogenboom, Mia O; Baird, Andrew H; Kuo, Chao-Yang; Madin, Joshua S; Hughes, Terry P

    2018-03-20

    Corals are major contributors to a range of key ecosystem functions on tropical reefs, including calcification, photosynthesis, nutrient cycling, and the provision of habitat structure. The abundance of corals is declining at multiple scales, and the species composition of assemblages is responding to escalating human pressures, including anthropogenic global warming. An urgent challenge is to understand the functional consequences of these shifts in abundance and composition in different biogeographical contexts. While global patterns of coral species richness are well known, the biogeography of coral functions in provinces and domains with high and low redundancy is poorly understood. Here, we quantify the functional traits of all currently recognized zooxanthellate coral species ( n = 821) in both the Indo-Pacific and Atlantic domains to examine the relationships between species richness and the diversity and redundancy of functional trait space. We find that trait diversity is remarkably conserved (>75% of the global total) along latitudinal and longitudinal gradients in species richness, falling away only in species-poor provinces ( n < 200), such as the Persian Gulf (52% of the global total), Hawaii (37%), the Caribbean (26%), and the East-Pacific (20%), where redundancy is also diminished. In the more species-poor provinces, large and ecologically important areas of trait space are empty, or occupied by just a few, highly distinctive species. These striking biogeographical differences in redundancy could affect the resilience of critical reef functions and highlight the vulnerability of relatively depauperate, peripheral locations, which are often a low priority for targeted conservation efforts.

  5. IN-STREAM AND WATERSHED PREDICTORS OF GENETIC DIVERSITY, EFFECTIVE POPULATION SIZE AND IMMIGRATION ACROSS RIVER-STREAM NETWORKS

    EPA Science Inventory

    The influence of spatial processes on population dynamics within river-stream networks is poorly understood. Utilizing spatially explicit analyses of temporal genetic variance, we examined whether persistence of Central Stonerollers (Campostoma anomalum) reflects differences in h...

  6. Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle

    USDA-ARS?s Scientific Manuscript database

    The domestication and development of cattle has considerably impacted human societies, but the histories of cattle breeds have been poorly understood especially for African, Asian, and American breeds. Using genotypes from 43,043 autosomal single nucleotide polymorphism markers scored in 1,543 anima...

  7. WWW: The Scientific Method

    ERIC Educational Resources Information Center

    Blystone, Robert V.; Blodgett, Kevin

    2006-01-01

    The scientific method is the principal methodology by which biological knowledge is gained and disseminated. As fundamental as the scientific method may be, its historical development is poorly understood, its definition is variable, and its deployment is uneven. Scientific progress may occur without the strictures imposed by the formal…

  8. From Movements to Actions: Two Mechanisms for Learning Action Sequences

    ERIC Educational Resources Information Center

    Endress, Ansgar D.; Wood, Justin N.

    2011-01-01

    When other individuals move, we interpret their movements as discrete, hierarchically-organized, goal-directed actions. However, the mechanisms that integrate visible movement features into actions are poorly understood. Here, we consider two sequence learning mechanisms--transitional probability-based (TP) and position-based encoding…

  9. Accumulation of the Antibiotic Phenazine-1-Carboxylic Acid in the Rhizosphere of Dryland Cereals

    USDA-ARS?s Scientific Manuscript database

    Natural antibiotics are thought to function in the defense, fitness, competitiveness, biocontrol activity, communication and gene regulation of microorganisms. However, the scale and quantitative aspects of antibiotic production in natural settings are poorly understood. We addressed these fundament...

  10. Size matters: The contribution of mega-infauna to the food webs and ecosystem services of an Oregon estuary - ESA

    EPA Science Inventory

    Background/Questions/Methods Large-bodied invertebrates (bivalves, polychaetes, burrowing shrimps) are common to infaunal communities of NE Pacific estuaries, but their contribution to estuarine community structure, function and ecosystem services is poorly understood because ...

  11. Olfactory disruption: towards controlling important insect vectors of disease

    USDA-ARS?s Scientific Manuscript database

    Chemical repellents are used to decrease contacts between insect disease vectors and their hosts, thus reducing the probability of disease transmission. The molecular mechanisms by which repellents have their effects are poorly understood and remain a controversial topic. Here we present recent re...

  12. Environmental enteric dysfunction is associated with carnitine deficiency and altered fatty acid oxidation

    USDA-ARS?s Scientific Manuscript database

    Environmental enteric dysfunction (EED), a condition characterized by small intestine inflammation and abnormal gut permeability, is widespread in children in developing countries and a major cause of growth failure. The pathophysiology of EED remains poorly understood. We measured serum metabolite...

  13. LOCAL VS. REGIONAL EFFECTS ON FISH DIVERSITY AS MEDIATED BY STREAMFLOW DISTURBANCE REGIME

    EPA Science Inventory

    abstract

    The interplay of local and regional processes on fish diversity is poorly understood, especially related to patterns of streamflow disturbance regime. Articulation of the relationship between flow disturbance patterns and river fishes across local to regional scal...

  14. Disruption of the circadian clock within the cardiomyocyte influences mycardial contractile function, metabolism, and gene expression

    USDA-ARS?s Scientific Manuscript database

    Virtually every mammalian cell, including cardiomyocytes, possesses an intrinsic circadian clock. The role of this transcriptionally based molecular mechanism in cardiovascular biology is poorly understood. We hypothesized that the circadian clock within the cardiomyocyte influences diurnal variatio...

  15. The role of methionine metabolism in inflammatory bowel disease

    USDA-ARS?s Scientific Manuscript database

    Methionine (Met) cycle activity is critical for normal cell functions. Met metabolites S-adenosylmethionine (SAM) and methylthioadenosine (MTA) are anti-inflammatory, yet their role in inflammatory bowel disease (IBD) is poorly understood. We hypothesize that active IBD leads to changes in Met metab...

  16. Molecular basis for the thermostability of Newcastle disease virus

    USDA-ARS?s Scientific Manuscript database

    Thermostable Newcastle disease virus (NDV) vaccines have been used widely to protect village chickens against Newcastle disease, due to their decreased dependence on cold chain for transport and storage. However, the genetic basis underlying the NDV thermostability is poorly understood. In this stud...

  17. Development and preliminary validation of the Parenting around SNAcking Questionnaire (P-SNAQ)

    USDA-ARS?s Scientific Manuscript database

    Snacking makes significant contributions to children's dietary intake but is poorly understood from a parenting perspective. This research was designed to develop and evaluate the psychometrics of a theoretically grounded, empirically-informed measure of snack parenting. The Parenting around SNAckin...

  18. Do boll weevils really diapause?

    USDA-ARS?s Scientific Manuscript database

    Boll weevil, Anthonomus grandis grandis Boheman, diapause has been poorly understood since the term was first used 50 yrs ago to describe the pest’s winter dormancy in temperate regions. This literature-based study found that low temperature and changes in photoperiod are the boll weevil diapause-i...

  19. Light absorption of secondary organic aerosol: Composition and contribution of nitro-aromatic compounds

    EPA Science Inventory

    Secondary organic aerosol (SOA) might affect the atmospheric radiation balance through absorbing light at shorter visible and UV wavelengths. However, the composition and optical properties of light-absorbing SOA is poorly understood. In this work, SOA filter samples were collect...

  20. Reproductive responses of northern goshawks to variable prey populations

    Treesearch

    Susan R. Salafsky; Richard T. Reynolds; Barry R. Noon; John A. Wiens

    2007-01-01

    Developing comprehensive conservation strategies requires knowledge of factors influencing population growth and persistence. Although variable prey resources are often associated with fluctuations in raptor demographic parameters, the mechanisms of food limitation are poorly understood, especially for a generalist predator like the northern goshawk (Accipiter...

  1. The dark side of suibsidies: quantifying contaminant exposure to riparian predators via stream insects

    EPA Science Inventory

    Aquatic insects provide a critical nutrient subsidy to riparian food webs, yet their role as vectors of contaminants to terrestrial ecosystems is poorly understood. We investigated relationships between aquatic (resource utilization) and contaminant exposure for a riparian invert...

  2. The geography of spatial synchrony

    Treesearch

    Jonathan A. Walter; Lawrence W. Sheppard; Thomas L. Anderson; Jude H. Kastens; Ottar N. Bjørnstad; Andrew M. Liebhold; Daniel C. Reuman; Bernd Blasius

    2017-01-01

    Spatial synchrony, defined as correlated temporal fluctuations among populations, is a fundamental feature of population dynamics, but many aspects of synchrony remain poorly understood. Few studies have examined detailed geographical patterns of synchrony; instead most focus on how synchrony declines with increasing linear distance between locations, making the...

  3. Relations between Alcohol, Violence and Victimization in Adolescence

    ERIC Educational Resources Information Center

    Shepherd, J. P.; Sutherland, I.; Newcombe, R. G.

    2006-01-01

    Background: Compared to links between alcohol and aggression, links between alcohol and vulnerability are poorly understood. Objectives: To determine whether there is a significant relationship between vulnerability to physical violence and alcohol consumption in adolescence independent of a relationship between alcohol consumption and violent…

  4. Heredity Factors in Spatial Visualization.

    ERIC Educational Resources Information Center

    Vandenberg, S. G.

    Spatial visualization is not yet clearly understood. Some researchers have concluded that two factors or abilities are involved, spatial orientation and spatial visualization. Different definitions and different tests have been proposed for these two abilities. Several studies indicate that women generally perform more poorly on spatial tests than…

  5. Ecosystem Development after Mangrove Wetland Creation: Plant-Soil Change across a 20-year Chronosequence

    EPA Science Inventory

    Mangrove wetland restoration and creation efforts are increasingly proposed as mechanisms to compensate for mangrove wetland loss. However, ecosystem development and functional equivalence in restored and created mangrove wetlands is poorly understood. We compared a 20-yr chrono...

  6. Working Model Hearts

    ERIC Educational Resources Information Center

    Brock, David

    2009-01-01

    Despite student interest, the heart is often a poorly understood topic in biology. To help students understand this vital organ's physiology, the author created this investigation activity involving the mammalian heart and its role in the circulatory system. Students design, build, and demonstrate working artificial "hearts" to exhibit what they…

  7. Technology-Enhanced Discovery

    ERIC Educational Resources Information Center

    Harrow, Chris; Chin, Lillian

    2014-01-01

    Exploration, innovation, proof: For students, teachers, and others who are curious, keeping an open mind and being ready to investigate unusual or unexpected properties will always lead to learning something new. Technology can further this process, allowing various behaviors to be analyzed that were previously memorized or poorly understood. This…

  8. Multi-scale assessment of human-induced changes to Amazonian instream habitats

    EPA Science Inventory

    Context: Land use change and forest degradation have myriad effects on tropical ecosystems. Yet their consequences for low-order streams remain very poorly understood, including in the world´s largest freshwater basin, the Amazon.Objectives: Determine the degree to which ph...

  9. Child stunting is associated with low circulating essential amino acids

    USDA-ARS?s Scientific Manuscript database

    Stunting affects about one-quarter of children under five worldwide. The pathogenesis of stunting is poorly understood. Nutritional interventions have had only modest effects in reducing stunting. We hypothesized that insufficiency in essential amino acids may be limiting the linear growth of childr...

  10. Introduction to the Thematic Minireview Series: Brain glycogen metabolism.

    PubMed

    Carlson, Gerald M; Dienel, Gerald A; Colbran, Roger J

    2018-05-11

    The synthesis of glycogen allows for efficient intracellular storage of glucose molecules in a soluble form that can be rapidly released to enter glycolysis in response to energy demand. Intensive studies of glucose and glycogen metabolism, predominantly in skeletal muscle and liver, have produced innumerable insights into the mechanisms of hormone action, resulting in the award of several Nobel Prizes over the last one hundred years. Glycogen is actually present in all cells and tissues, albeit at much lower levels than found in muscle or liver. However, metabolic and physiological roles of glycogen in other tissues are poorly understood. This series of Minireviews summarizes what is known about the enzymes involved in brain glycogen metabolism and studies that have linked glycogen metabolism to multiple brain functions involving metabolic communication between astrocytes and neurons. Recent studies unexpectedly linking some forms of epilepsy to mutations in two poorly understood proteins involved in glycogen metabolism are also reviewed. © 2018 Carlson et al.

  11. Immigrant dairy workers' perceptions of health and safety on the farm in America's Heartland.

    PubMed

    Liebman, Amy King; Juarez-Carrillo, Patricia Margarita; Reyes, Iris Anne Cruz; Keifer, Matthew Charles

    2016-03-01

    Dairy farming is dangerous. Yearly, farms grow fewer and larger by employing immigrant workers, who have limited industrial agriculture experience and safety and health training. We examined results of five focus groups with 37 Hispanic, immigrant dairy workers. Analysis followed a grounded theory approach and employed ATLAS.ti. Reported injury experience affirmed the hazardous nature of dairy. Some workers received appropriate worker compensation benefits, whereas others were instructed to deny work-relatedness. Some employers covered medical injury costs out-of-pocket, whereas others did not. Cows were a major injury source. Pressure to work and weather were noted as injury risk factors. Worker compensation was poorly understood, and immigration status and fear of deportation influenced injury and hazard reporting. Injury management practices range from benevolent to threatening. Workers compensation is poorly understood and undocumented status is an occupational hazard. We underscore the need for further research and immigration policy change. © 2015 Wiley Periodicals, Inc.

  12. Direct observation of closed magnetic flux trapped in the high-latitude magnetosphere.

    PubMed

    Fear, R C; Milan, S E; Maggiolo, R; Fazakerley, A N; Dandouras, I; Mende, S B

    2014-12-19

    The structure of Earth's magnetosphere is poorly understood when the interplanetary magnetic field is northward. Under this condition, uncharacteristically energetic plasma is observed in the magnetotail lobes, which is not expected in the textbook model of the magnetosphere. Using satellite observations, we show that these lobe plasma signatures occur on high-latitude magnetic field lines that have been closed by the fundamental plasma process of magnetic reconnection. Previously, it has been suggested that closed flux can become trapped in the lobe and that this plasma-trapping process could explain another poorly understood phenomenon: the presence of auroras at extremely high latitudes, called transpolar arcs. Observations of the aurora at the same time as the lobe plasma signatures reveal the presence of a transpolar arc. The excellent correspondence between the transpolar arc and the trapped closed flux at high altitudes provides very strong evidence of the trapping mechanism as the cause of transpolar arcs. Copyright © 2014, American Association for the Advancement of Science.

  13. Sea-level-induced seismicity and submarine landslide occurrence

    USGS Publications Warehouse

    Brothers, Daniel S.; Luttrell, Karen M.; Chaytor, Jason D.

    2013-01-01

    The temporal coincidence between rapid late Pleistocene sea-level rise and large-scale slope failures is widely documented. Nevertheless, the physical mechanisms that link these phenomena are poorly understood, particularly along nonglaciated margins. Here we investigate the causal relationships between rapid sea-level rise, flexural stress loading, and increased seismicity rates along passive margins. We find that Coulomb failure stress across fault systems of passive continental margins may have increased more than 1 MPa during rapid late Pleistocene–early Holocene sea-level rise, an amount sufficient to trigger fault reactivation and rupture. These results suggest that sea-level–modulated seismicity may have contributed to a number of poorly understood but widely observed phenomena, including (1) increased frequency of large-scale submarine landslides during rapid, late Pleistocene sea-level rise; (2) emplacement of coarse-grained mass transport deposits on deep-sea fans during the early stages of marine transgression; and (3) the unroofing and release of methane gas sequestered in continental slope sediments.

  14. Inhibiting platelet-derived growth factor beta reduces Ewing's sarcoma growth and metastasis in a novel orthotopic human xenograft model.

    PubMed

    Wang, Yong Xin; Mandal, Deendayal; Wang, Suizhau; Hughes, Dennis; Pollock, Raphael E; Lev, Dina; Kleinerman, Eugenie; Hayes-Jordan, Andrea

    2009-01-01

    Despite aggressive therapy, Ewing's sarcoma (ES) patients have a poor five-year overall survival of only 20-40%. Pulmonary metastasis is the most common form of demise in these patients. The pathogenesis of pulmonary metastasis is poorly understood and few orthotopic models exist that allow study of spontaneous pulmonary metastasis in ES. We have developed a novel orthotopic xenograft model in which spontaneous pulmonary metastases develop. While the underlying biology of ES is incompletely understood, in addition to the EWS-FLI-1 mutation, it is known that platelet-derived growth factor receptor beta (PDGFR-beta) is highly expressed in ES. Hypothesizing that PDGFR-beta expression is indicative of a specific role for this receptor protein in ES progression, the effect of PDGFR-beta inhibition on ES growth and metastasis was assessed in this novel orthotopic ES model. Silencing PDGFR-beta reduced spontaneous growth and metastasis in ES. Preclinical therapeutically relevant findings such as these may ultimately lead to new treatment initiatives in ES.

  15. Cortical dendritic activity correlates with spindle-rich oscillations during sleep in rodents.

    PubMed

    Seibt, Julie; Richard, Clément J; Sigl-Glöckner, Johanna; Takahashi, Naoya; Kaplan, David I; Doron, Guy; de Limoges, Denis; Bocklisch, Christina; Larkum, Matthew E

    2017-09-25

    How sleep influences brain plasticity is not known. In particular, why certain electroencephalographic (EEG) rhythms are linked to memory consolidation is poorly understood. Calcium activity in dendrites is known to be necessary for structural plasticity changes, but this has never been carefully examined during sleep. Here, we report that calcium activity in populations of neocortical dendrites is increased and synchronised during oscillations in the spindle range in naturally sleeping rodents. Remarkably, the same relationship is not found in cell bodies of the same neurons and throughout the cortical column. Spindles during sleep have been suggested to be important for brain development and plasticity. Our results provide evidence for a physiological link of spindles in the cortex specific to dendrites, the main site of synaptic plasticity.Different stages of sleep, marked by particular electroencephalographic (EEG) signatures, have been linked to memory consolidation, but underlying mechanisms are poorly understood. Here, the authors show that dendritic calcium synchronisation correlates with spindle-rich sleep phases.

  16. Small area estimation (SAE) model: Case study of poverty in West Java Province

    NASA Astrophysics Data System (ADS)

    Suhartini, Titin; Sadik, Kusman; Indahwati

    2016-02-01

    This paper showed the comparative of direct estimation and indirect/Small Area Estimation (SAE) model. Model selection included resolve multicollinearity problem in auxiliary variable, such as choosing only variable non-multicollinearity and implemented principal component (PC). Concern parameters in this paper were the proportion of agricultural venture poor households and agricultural poor households area level in West Java Province. The approach for estimating these parameters could be performed based on direct estimation and SAE. The problem of direct estimation, three area even zero and could not be conducted by directly estimation, because small sample size. The proportion of agricultural venture poor households showed 19.22% and agricultural poor households showed 46.79%. The best model from agricultural venture poor households by choosing only variable non-multicollinearity and the best model from agricultural poor households by implemented PC. The best estimator showed SAE better then direct estimation both of the proportion of agricultural venture poor households and agricultural poor households area level in West Java Province. The solution overcame small sample size and obtained estimation for small area was implemented small area estimation method for evidence higher accuracy and better precision improved direct estimator.

  17. Development and validation of risk profiles of West African rural communities facing multiple natural hazards

    PubMed Central

    Renaud, Fabrice G.; Kloos, Julia; Walz, Yvonne; Rhyner, Jakob

    2017-01-01

    West Africa has been described as a hotspot of climate change. The reliance on rain-fed agriculture by over 65% of the population means that vulnerability to climatic hazards such as droughts, rainstorms and floods will continue. Yet, the vulnerability and risk levels faced by different rural social-ecological systems (SES) affected by multiple hazards are poorly understood. To fill this gap, this study quantifies risk and vulnerability of rural communities to drought and floods. Risk is assessed using an indicator-based approach. A stepwise methodology is followed that combines participatory approaches with statistical, remote sensing and Geographic Information System techniques to develop community level vulnerability indices in three watersheds (Dano, Burkina Faso; Dassari, Benin; Vea, Ghana). The results show varying levels of risk profiles across the three watersheds. Statistically significant high levels of mean risk in the Dano area of Burkina Faso are found whilst communities in the Dassari area of Benin show low mean risk. The high risk in the Dano area results from, among other factors, underlying high exposure to droughts and rainstorms, longer dry season duration, low caloric intake per capita, and poor local institutions. The study introduces the concept of community impact score (CIS) to validate the indicator-based risk and vulnerability modelling. The CIS measures the cumulative impact of the occurrence of multiple hazards over five years. 65.3% of the variance in observed impact of hazards/CIS was explained by the risk models and communities with high simulated disaster risk generally follow areas with high observed disaster impacts. Results from this study will help disaster managers to better understand disaster risk and develop appropriate, inclusive and well integrated mitigation and adaptation plans at the local level. It fulfills the increasing need to balance global/regional assessments with community level assessments where major decisions against risk are actually taken and implemented. PMID:28248969

  18. Impact of heterogeneity and socioeconomic factors on individual behavior in decentralized sharing ecosystems

    PubMed Central

    Gavaldà-Miralles, Arnau; Choffnes, David R.; Otto, John S.; Sánchez, Mario A.; Bustamante, Fabián E.; Amaral, Luís A. N.; Duch, Jordi; Guimerà, Roger

    2014-01-01

    Tens of millions of individuals around the world use decentralized content distribution systems, a fact of growing social, economic, and technological importance. These sharing systems are poorly understood because, unlike in other technosocial systems, it is difficult to gather large-scale data about user behavior. Here, we investigate user activity patterns and the socioeconomic factors that could explain the behavior. Our analysis reveals that (i) the ecosystem is heterogeneous at several levels: content types are heterogeneous, users specialize in a few content types, and countries are heterogeneous in user profiles; and (ii) there is a strong correlation between socioeconomic indicators of a country and users behavior. Our findings open a research area on the dynamics of decentralized sharing ecosystems and the socioeconomic factors affecting them, and may have implications for the design of algorithms and for policymaking. PMID:25288755

  19. Homelessness and Housing Insecurity Among Former Prisoners

    PubMed Central

    HERBERT, CLAIRE W.; MORENOFF, JEFFREY D.; HARDING, DAVID J.

    2016-01-01

    The United States has experienced dramatic increases in both incarceration rates and the population of insecurely housed or homeless persons since the 1980s. These marginalized populations have strong overlaps, with many people being poor, minority, and from an urban area. That a relationship between homelessness, housing insecurity, and incarceration exists is clear, but the extent and nature of this relationship is not yet adequately understood. We use longitudinal, administrative data on Michigan parolees released in 2003 to examine returning prisoners’ experiences with housing insecurity and homelessness. Our analysis finds relatively low rates of outright homelessness among former prisoners, but very high rates of housing insecurity, much of which is linked to features of community supervision, such as intermediate sanctions, returns to prison, and absconding. We identify risk factors for housing insecurity, including mental illness, substance use, prior incarceration, and homelessness, as well as protective “buffers” against insecurity and homelessness, including earnings and social supports. PMID:26913294

  20. Slicing, sampling, and distance-dependent effects affect network measures in simulated cortical circuit structures.

    PubMed

    Miner, Daniel C; Triesch, Jochen

    2014-01-01

    The neuroanatomical connectivity of cortical circuits is believed to follow certain rules, the exact origins of which are still poorly understood. In particular, numerous nonrandom features, such as common neighbor clustering, overrepresentation of reciprocal connectivity, and overrepresentation of certain triadic graph motifs have been experimentally observed in cortical slice data. Some of these data, particularly regarding bidirectional connectivity are seemingly contradictory, and the reasons for this are unclear. Here we present a simple static geometric network model with distance-dependent connectivity on a realistic scale that naturally gives rise to certain elements of these observed behaviors, and may provide plausible explanations for some of the conflicting findings. Specifically, investigation of the model shows that experimentally measured nonrandom effects, especially bidirectional connectivity, may depend sensitively on experimental parameters such as slice thickness and sampling area, suggesting potential explanations for the seemingly conflicting experimental results.

  1. Slicing, sampling, and distance-dependent effects affect network measures in simulated cortical circuit structures

    PubMed Central

    Miner, Daniel C.; Triesch, Jochen

    2014-01-01

    The neuroanatomical connectivity of cortical circuits is believed to follow certain rules, the exact origins of which are still poorly understood. In particular, numerous nonrandom features, such as common neighbor clustering, overrepresentation of reciprocal connectivity, and overrepresentation of certain triadic graph motifs have been experimentally observed in cortical slice data. Some of these data, particularly regarding bidirectional connectivity are seemingly contradictory, and the reasons for this are unclear. Here we present a simple static geometric network model with distance-dependent connectivity on a realistic scale that naturally gives rise to certain elements of these observed behaviors, and may provide plausible explanations for some of the conflicting findings. Specifically, investigation of the model shows that experimentally measured nonrandom effects, especially bidirectional connectivity, may depend sensitively on experimental parameters such as slice thickness and sampling area, suggesting potential explanations for the seemingly conflicting experimental results. PMID:25414647

  2. Widespread Moulin Formation During Supraglacial Lake Drainages in Greenland

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hoffman, Matthew J.; Perego, Mauro; Andrews, Lauren C.

    Moulins permit access of surface meltwater to the glacier bed, causing basal lubrication and ice speedup in the ablation zone of western Greenland during summer. In spite of the substantial impact of moulins on ice dynamics, the conditions under which they form are poorly understood. We assimilate a time series of ice surface velocity from a network of eleven Global Positioning System receivers into an ice sheet model to estimate ice sheet stresses during winter, spring, and summer in a ~30 × 10 km region. Surface-parallel von Mises stress increases slightly during spring speedup and early summer, sufficient to allowmore » formation of 16% of moulins mapped in the study area. Conversely, 63% of moulins experience stresses over the tensile strength of ice during a short (hours) supraglacial lake drainage event. Lake drainages appear to control moulin density, which is itself a control on subglacial drainage efficiency and summer ice velocities.« less

  3. The Intensity, Directionality, and Statistics of Underwater Noise From Melting Icebergs

    NASA Astrophysics Data System (ADS)

    Glowacki, Oskar; Deane, Grant B.; Moskalik, Mateusz

    2018-05-01

    Freshwater fluxes from melting icebergs and glaciers are important contributors to both sea level rise and anomalies of seawater salinity in polar regions. However, the hazards encountered close to icebergs and glaciers make it difficult to quantify their melt rates directly, motivating the development of cryoacoustics as a remote sensing technique. Recent studies have shown a qualitative link between ice melting and the accompanying underwater noise, but the properties of this signal remain poorly understood. Here we examine the intensity, directionality, and temporal statistics of the underwater noise radiated by melting icebergs in Hornsund Fjord, Svalbard, using a three-element acoustic array. We present the first estimate of noise energy per unit area associated with iceberg melt and demonstrate its qualitative dependence on exposure to surface current. Finally, we show that the analysis of noise directionality and statistics makes it possible to distinguish iceberg melt from the glacier terminus melt.

  4. Comprehensive transcriptional map of primate brain development

    PubMed Central

    Bakken, Trygve E.; Miller, Jeremy A.; Ding, Song-Lin; Sunkin, Susan M.; Smith, Kimberly A.; Ng, Lydia; Szafer, Aaron; Dalley, Rachel A.; Royall, Joshua J.; Lemon, Tracy; Shapouri, Sheila; Aiona, Kaylynn; Arnold, James; Bennett, Jeffrey L.; Bertagnolli, Darren; Bickley, Kristopher; Boe, Andrew; Brouner, Krissy; Butler, Stephanie; Byrnes, Emi; Caldejon, Shiella; Carey, Anita; Cate, Shelby; Chapin, Mike; Chen, Jefferey; Dee, Nick; Desta, Tsega; Dolbeare, Tim A.; Dotson, Nadia; Ebbert, Amanda; Fulfs, Erich; Gee, Garrett; Gilbert, Terri L.; Goldy, Jeff; Gourley, Lindsey; Gregor, Ben; Gu, Guangyu; Hall, Jon; Haradon, Zeb; Haynor, David R.; Hejazinia, Nika; Hoerder-Suabedissen, Anna; Howard, Robert; Jochim, Jay; Kinnunen, Marty; Kriedberg, Ali; Kuan, Chihchau L.; Lau, Christopher; Lee, Chang-Kyu; Lee, Felix; Luong, Lon; Mastan, Naveed; May, Ryan; Melchor, Jose; Mosqueda, Nerick; Mott, Erika; Ngo, Kiet; Nyhus, Julie; Oldre, Aaron; Olson, Eric; Parente, Jody; Parker, Patrick D.; Parry, Sheana; Pendergraft, Julie; Potekhina, Lydia; Reding, Melissa; Riley, Zackery L.; Roberts, Tyson; Rogers, Brandon; Roll, Kate; Rosen, David; Sandman, David; Sarreal, Melaine; Shapovalova, Nadiya; Shi, Shu; Sjoquist, Nathan; Sodt, Andy J.; Townsend, Robbie; Velasquez, Lissette; Wagley, Udi; Wakeman, Wayne B.; White, Cassandra; Bennett, Crissa; Wu, Jennifer; Young, Rob; Youngstrom, Brian L.; Wohnoutka, Paul; Gibbs, Richard A.; Rogers, Jeffrey; Hohmann, John G.; Hawrylycz, Michael J.; Hevner, Robert F.; Molnár, Zoltán; Phillips, John W.; Dang, Chinh; Jones, Allan R.; Amaral, David G.; Bernard, Amy; Lein, Ed S.

    2017-01-01

    The transcriptional underpinnings of brain development remain poorly understood, particularly in humans and closely related non-human primates. We describe a high resolution transcriptional atlas of rhesus monkey brain development that combines dense temporal sampling of prenatal and postnatal periods with fine anatomical parcellation of cortical and subcortical regions associated with human neuropsychiatric disease. Gene expression changes more rapidly before birth, both in progenitor cells and maturing neurons, and cortical layers and areas acquire adult-like molecular profiles surprisingly late postnatally. Disparate cell populations exhibit distinct developmental timing but also unexpected synchrony of processes underlying neural circuit construction including cell projection and adhesion. Candidate risk genes for neurodevelopmental disorders including primary microcephaly, autism spectrum disorder, intellectual disability, and schizophrenia show disease-specific spatiotemporal enrichment within developing neocortex. Human developmental expression trajectories are more similar to monkey than rodent, and approximately 9% of genes show human-specific regulation with evidence for prolonged maturation or neoteny. PMID:27409810

  5. Implementation of near-infrared spectroscopy in a rat model of cardiac arrest and resuscitation

    NASA Astrophysics Data System (ADS)

    Rodriguez, Juan G.; Xiao, Feng; Ferrara, Davon; Ewing, Jennifer; Zhang, Shu; Alexander, Steven; Battarbee, Harold

    2002-07-01

    Transient global cerebral ischemia accompanying cardiac arrest (CA) often leads to permanent brain damage with poor neurological outcome. The precise chain of events underlying the cerebral damage after CA is still not fully understood. Progress in this area may profit from the development of new non-invasive tools that provide real-time information on the vascular and cellular processes preceding the damage. One way to assess these processes is through near-IR spectroscopy, which has demonstrated the ability to quantify changes in blood volume, hemoglobin oxygenation, cytochrome oxidase redox state, and tissue water content. Here we report on the successful implementation of this form of spectroscopy in a rat model of asphyxial CA and resuscitation, under hypothermic and normothermic conditions. Preliminary results are shown that provide a new temporal insight into the cerebral circulation during CA and post-resuscitation.

  6. Cost containment: the Pacific. Japan.

    PubMed

    Tajimi, K; Shimada, Y; Nishimura, S; Sirio, C A

    1994-08-01

    The Japanese healthcare system is structured to provide universal healthcare access to the entire Japanese population via a constitutional guarantee. Increasing costs within the Japanese healthcare system are largely attributable to the country's rapidly aging population. Intensive care services are provided primarily in large tertiary care hospitals by a relatively small cadre of dedicated critical care physicians. Triage pressure is high in many Japanese hospitals due to a relatively small proportion of ICU beds. As a result, few patients are admitted to the ICU at low risk of adverse outcome or monitoring. Costs associated with providing critical care are poorly understood because of current hospital cost accounting systems. Critical care costs have only recently become an area of concern. Nevertheless, critical care physicians are taking steps to more fully understand severity of illness, clinical outcome, and utilization of resources in order to effectively guide healthcare policy and resource allocation decisions impacting Japanese critical care.

  7. Climate legacies drive global soil carbon stocks in terrestrial ecosystems

    PubMed Central

    Delgado-Baquerizo, Manuel; Eldridge, David J.; Maestre, Fernando T.; Karunaratne, Senani B.; Trivedi, Pankaj; Reich, Peter B.; Singh, Brajesh K.

    2017-01-01

    Climatic conditions shift gradually over millennia, altering the rates at which carbon (C) is fixed from the atmosphere and stored in the soil. However, legacy impacts of past climates on current soil C stocks are poorly understood. We used data from more than 5000 terrestrial sites from three global and regional data sets to identify the relative importance of current and past (Last Glacial Maximum and mid-Holocene) climatic conditions in regulating soil C stocks in natural and agricultural areas. Paleoclimate always explained a greater amount of the variance in soil C stocks than current climate at regional and global scales. Our results indicate that climatic legacies help determine global soil C stocks in terrestrial ecosystems where agriculture is highly dependent on current climatic conditions. Our findings emphasize the importance of considering how climate legacies influence soil C content, allowing us to improve quantitative predictions of global C stocks under different climatic scenarios. PMID:28439540

  8. Fluid Pocket Generation in Response to Heterogeneous Reactivity of a Rock Fracture Under Hydrothermal Conditions

    NASA Astrophysics Data System (ADS)

    Okamoto, A.; Tanaka, H.; Watanabe, N.; Saishu, H.; Tsuchiya, N.

    2017-10-01

    Fractures are the location of various water-rock interactions within the Earth's crust; however, the impact of the chemical heterogeneity of fractures on hydraulic properties is poorly understood. We conducted flow-through experiments on the dissolution of granite with a tensile fracture at 350°C and fluid pressure of 20 MPa with confining pressure of 40 MPa. The aperture structures were evaluated by X-ray computed tomography before and after the experiments. Under the experimental conditions, quartz grains dissolve rapidly to produce grain-scale pockets on the fracture surface, whereas altered feldspar grains act as asperities to sustain the open cavities. The fracture contained gouge with large surface area. The feedback between fluid flow and the rapid dissolution of gouge material produced large fluid pockets, whereas permeability did not always increase significantly. Such intense hydrological-chemical interactions could strongly influence the porosity-permeability relationship of fractured reservoirs in the crust.

  9. Antagonistic interplay between hypocretin and leptin in the lateral hypothalamus regulates stress responses.

    PubMed

    Bonnavion, Patricia; Jackson, Alexander C; Carter, Matthew E; de Lecea, Luis

    2015-02-19

    The hypothalamic-pituitary-adrenal (HPA) axis functions to coordinate behavioural and physiological responses to stress in a manner that depends on the behavioural state of the organism. However, the mechanisms through which arousal and metabolic states influence the HPA axis are poorly understood. Here using optogenetic approaches in mice, we show that neurons that produce hypocretin (Hcrt)/orexin in the lateral hypothalamic area (LHA) regulate corticosterone release and a variety of behaviours and physiological hallmarks of the stress response. Interestingly, we found that Hcrt neuronal activity and Hcrt-mediated stress responses were inhibited by the satiety hormone leptin, which acts, in part, through a network of leptin-sensitive neurons in the LHA. These data demonstrate how peripheral metabolic signals interact with hypothalamic neurons to coordinate stress and arousal and suggest one mechanism through which hyperarousal or altered metabolic states may be linked with abnormal stress responses.

  10. Changes in the Mechanisms Causing Rapid Drought Cessation in the Southeastern United States

    NASA Astrophysics Data System (ADS)

    Maxwell, Justin T.; Knapp, Paul A.; Ortegren, Jason T.; Ficklin, Darren L.; Soulé, Peter T.

    2017-12-01

    The synoptic processes that end droughts are poorly understood, yet have significant climatological implications. Here we examined the spatiotemporal patterns of rapid drought cessation (RDC) in the southeastern United States during the1979-2013 warm season (April-November) for three storm types: Frontal, Tropical, and Air mass. We defined RDC as a 1 month shift in soil moisture sufficient to alleviate an existing drought. We found that 73% of all warm-season droughts were ended by RDC events and the three storm-type groups ended droughts over similar spatial areas. Frontal storms were the most frequent mechanism for RDC events, yet their occurrences significantly decreased and were negatively related to increases in Northern Hemisphere air temperatures. Projected future warming in the Northern Hemisphere suggests a continued decline in the frequency and relative contribution of Frontal storms as RDC events, potentially influencing the timing and spatial scale of drought cessation in the southeastern U.S.

  11. Aeromagnetic anomaly patterns reveal buried faults along the eastern margin of the Wilkes Subglacial Basin (East Antarctica)

    USGS Publications Warehouse

    Armadillo, E.; Ferraccioli, F.; Zunino, A.; Bozzo, E.

    2007-01-01

    The Wilkes Subglacial Basin (WSB) is the major morphological feature recognized in the hinterland of the Transantarctic Mountains. The origin of this basin remains contentious and relatively poorly understood due to the lack of extensive geophysical exploration. We present a new aeromagnetic anomaly map over the transition between the Transantarctic Mountains and the WSB for an area adjacent to northern Victoria Land. The aeromagnetic map reveals the existence of subglacial faults along the eastern margin of the WSB. These inferred faults connect previously proposed fault zones over Oates Land with those mapped along the Ross Sea Coast. Specifically, we suggest a link between the Matusevich Frature Zone and the Priestley Fault during the Cenozoic. The new evidence for structural control on the eastern margin of the WSB implies that a purely flexural origin for the basin is unlikely.

  12. Introduction and historical perspective.

    PubMed

    Gunning, Peter

    2008-01-01

    Tropomyosin is a coiled coil dimer which forms a polymer along the major groove of the majority of actin filaments. It is therefore one of the two primary components of the actin filament. Our understanding of the biological function of tropomyosin has been driven almost entirely by its role in striated muscle. This reflects both its original discovery as part of the thin filament in skeletal muscle and its pivotal role in regulating muscle contraction. In contrast, its role in the function of the cytoskeleton of all cells has been poorly understood due, at least in part, to the technical challenge of deciphering the function of a large number of isoforms. This book has brought together many of the leading researchers who have defined the function of tropomyosin in both normal and pathological conditions. Each author brings their own perspective in a series of stand alone reviews of the areas of tropomyosin research they have played a major role in defining.

  13. Spatial analysis of the invasion of lionfish in the western Atlantic and Caribbean.

    PubMed

    Johnston, Matthew W; Purkis, Samuel J

    2011-06-01

    Pterois volitans and Pterois miles, two sub-species of lionfish, have become the first non-native, invasive marine fish established along the United States Atlantic coast and Caribbean. The route and timing of the invasion is poorly understood, however historical sightings and captures have been robustly documented since their introduction. Herein we analyze these records based on spatial location, dates of arrival, and prevailing physical factors at the capture sights. Using a cellular automata model, we examine the relationship between depth, salinity, temperature, and current, finding the latter as the most influential parameter for transport of lionfish to new areas. The model output is a synthetic validated reproduction of the lionfish invasion, upon which predictive simulations in other locations can be based. This predictive model is simple, highly adaptable, relies entirely on publicly available data, and is applicable to other species. Copyright © 2011 Elsevier Ltd. All rights reserved.

  14. Nuclear Matrix Association: Switching to the Invasive Cytotrophoblast

    PubMed Central

    Drennan, Kathryn J.; Linnemann, Amelia K.; Platts, Adrian E.; Heng, Henry H.; Armant, D. Randall; Krawetz, Stephen A.

    2010-01-01

    Abnormal trophoblast invasion is associated with the most common and most severe complications of human pregnancy. The biology of invasion, as well as the etiology of abnormal invasion remains poorly understood. The aim of this study was to characterize the transcriptome of the HTR-8/SVneo human cytotrophoblast cell line which displays well characterized invasive and non-invasive behavior, and to correlate the activity of the transcriptome with nuclear matrix attachment and cell phenotype. Comparison of the invasive to non-invasive HTR transcriptomes was unremarkable. In contrast, comparison of the MARs on chromosomes 14–18 revealed an increased number of MARs associated with the invasive phenotype. These attachment areas were more likely to be associated with silent rather than actively transcribed genes. This study supports that view that that nuclear matrix attachment may play an important role in cytotrophoblast invasion by ensuring specific silencing that facilitates invasion. PMID:20346505

  15. Connecting the Lines between Hypogonadism and Atherosclerosis

    PubMed Central

    Fahed, Akl C.; Gholmieh, Joanna M.; Azar, Sami T.

    2012-01-01

    Epidemiological studies show that atherosclerotic cardiovascular disease is a leading cause of morbidity and mortality worldwide and point to gender differences with ageing males being at highest risk. Atherosclerosis is a complex process that has several risk factors and mediators. Hypogonadism is a commonly undiagnosed disease that has been associated with many of the events, and risk factors leading to atherosclerosis. The mechanistic relations between testosterone levels, atherosclerotic events, and risk factors are poorly understood in many instances, but the links are clear. In this paper, we summarize the research journey that explains the link between hypogonadism, each of the atherosclerotic events, and risk factors. We look into the different areas from which lessons could be learned, including epidemiological studies, animal and laboratory experiments, studies on androgen deprivation therapy patients, and studies on testosterone-treated patients. We finish by providing recommendations for the clinician and needs for future research. PMID:22518131

  16. Striatal BOLD Response Reflects the Impact of Herd Information on Financial Decisions

    PubMed Central

    Burke, Christopher J.; Tobler, Philippe N.; Schultz, Wolfram; Baddeley, Michelle

    2010-01-01

    Like other species, humans are sensitive to the decisions and actions of conspecifics, which can lead to herd behavior and undesirable outcomes such as stock market bubbles and bank runs. However, how the brain processes this socially derived influence is only poorly understood. Using functional magnetic resonance imaging (fMRI), we scanned participants as they made decisions on whether to buy stocks after observing others’ buying decisions. We demonstrate that activity in the ventral striatum, an area heavily implicated in reward processing, tracked the degree of influence on participants’ decisions arising from the observation of other peoples’ decisions. The signal did not track non-human, non-social control decisions. These findings lend weight to the notion that the ventral striatum is involved in the processing of complex social aspects of decision making and identify a possible neural basis for herd behavior. PMID:20589242

  17. Widespread Moulin Formation During Supraglacial Lake Drainages in Greenland

    DOE PAGES

    Hoffman, Matthew J.; Perego, Mauro; Andrews, Lauren C.; ...

    2018-01-17

    Moulins permit access of surface meltwater to the glacier bed, causing basal lubrication and ice speedup in the ablation zone of western Greenland during summer. In spite of the substantial impact of moulins on ice dynamics, the conditions under which they form are poorly understood. We assimilate a time series of ice surface velocity from a network of eleven Global Positioning System receivers into an ice sheet model to estimate ice sheet stresses during winter, spring, and summer in a ~30 × 10 km region. Surface-parallel von Mises stress increases slightly during spring speedup and early summer, sufficient to allowmore » formation of 16% of moulins mapped in the study area. Conversely, 63% of moulins experience stresses over the tensile strength of ice during a short (hours) supraglacial lake drainage event. Lake drainages appear to control moulin density, which is itself a control on subglacial drainage efficiency and summer ice velocities.« less

  18. Twentieth century turnover of Mexican endemic avifaunas: Landscape change versus climate drivers.

    PubMed

    Peterson, A Townsend; Navarro-Sigüenza, Adolfo G; Martínez-Meyer, Enrique; Cuervo-Robayo, Angela P; Berlanga, Humberto; Soberón, Jorge

    2015-05-01

    Numerous climate change effects on biodiversity have been anticipated and documented, including extinctions, range shifts, phenological shifts, and breakdown of interactions in ecological communities, yet the relative balance of different climate drivers and their relationships to other agents of global change (for example, land use and land-use change) remains relatively poorly understood. This study integrated historical and current biodiversity data on distributions of 115 Mexican endemic bird species to document areas of concentrated gains and losses of species in local communities, and then related those changes to climate and land-use drivers. Of all drivers examined, at this relatively coarse spatial resolution, only temperature change had significant impacts on avifaunal turnover; neither precipitation change nor human impact on landscapes had detectable effects. This study, conducted across species' geographic distributions, and covering all of Mexico, thanks to two large-scale biodiversity data sets, could discern relative importance of specific climatic drivers of biodiversity change.

  19. Attributes of clinical leadership in contemporary nursing: an integrative review.

    PubMed

    Mannix, Judy; Wilkes, Lesley; Daly, John

    2013-08-01

    Effective clinical leadership is offered as the key to healthy, functional and supportive work environments for nurses and other health professionals. However, as a concept it lacks a standard definition and is poorly understood. This paper reports on an integrative review undertaken to uncover current understandings of defining attributes of contemporary clinical leadership in nursing. Data collection involved a search of relevant electronic databases for a 10-year period. Keywords for the search were 'clinical leadership' and 'nursing'. Ten research papers met the inclusion criteria for the integrative review. Analysis of these studies indicated clinical leadership attributes had a clinical focus, a follower/team focus or a personal qualities focus; attributes necessary to sustain supportive workplaces and build the capacity and resilience of nursing workforces. The small number of research-based studies yielded for the review indicates the need for further research in the area of clinical leadership.

  20. Matrix stiffness reverses the effect of actomyosin tension on cell proliferation.

    PubMed

    Mih, Justin D; Marinkovic, Aleksandar; Liu, Fei; Sharif, Asma S; Tschumperlin, Daniel J

    2012-12-15

    The stiffness of the extracellular matrix exerts powerful effects on cell proliferation and differentiation, but the mechanisms transducing matrix stiffness into cellular fate decisions remain poorly understood. Two widely reported responses to matrix stiffening are increases in actomyosin contractility and cell proliferation. To delineate their relationship, we modulated cytoskeletal tension in cells grown across a physiological range of matrix stiffnesses. On both synthetic and naturally derived soft matrices, and across a panel of cell types, we observed a striking reversal of the effect of inhibiting actomyosin contractility, switching from the attenuation of proliferation on rigid substrates to the robust promotion of proliferation on soft matrices. Inhibiting contractility on soft matrices decoupled proliferation from cytoskeletal tension and focal adhesion organization, but not from cell spread area. Our results demonstrate that matrix stiffness and actomyosin contractility converge on cell spreading in an unexpected fashion to control a key aspect of cell fate.

  1. Matrix stiffness reverses the effect of actomyosin tension on cell proliferation

    PubMed Central

    Mih, Justin D.; Marinkovic, Aleksandar; Liu, Fei; Sharif, Asma S.; Tschumperlin, Daniel J.

    2012-01-01

    Summary The stiffness of the extracellular matrix exerts powerful effects on cell proliferation and differentiation, but the mechanisms transducing matrix stiffness into cellular fate decisions remain poorly understood. Two widely reported responses to matrix stiffening are increases in actomyosin contractility and cell proliferation. To delineate their relationship, we modulated cytoskeletal tension in cells grown across a physiological range of matrix stiffnesses. On both synthetic and naturally derived soft matrices, and across a panel of cell types, we observed a striking reversal of the effect of inhibiting actomyosin contractility, switching from the attenuation of proliferation on rigid substrates to the robust promotion of proliferation on soft matrices. Inhibiting contractility on soft matrices decoupled proliferation from cytoskeletal tension and focal adhesion organization, but not from cell spread area. Our results demonstrate that matrix stiffness and actomyosin contractility converge on cell spreading in an unexpected fashion to control a key aspect of cell fate. PMID:23097048

  2. Widespread Moulin Formation During Supraglacial Lake Drainages in Greenland

    NASA Astrophysics Data System (ADS)

    Hoffman, Matthew J.; Perego, Mauro; Andrews, Lauren C.; Price, Stephen F.; Neumann, Thomas A.; Johnson, Jesse V.; Catania, Ginny; Lüthi, Martin P.

    2018-01-01

    Moulins permit access of surface meltwater to the glacier bed, causing basal lubrication and ice speedup in the ablation zone of western Greenland during summer. Despite the substantial impact of moulins on ice dynamics, the conditions under which they form are poorly understood. We assimilate a time series of ice surface velocity from a network of eleven Global Positioning System receivers into an ice sheet model to estimate ice sheet stresses during winter, spring, and summer in a ˜30 × 10 km region. Surface-parallel von Mises stress increases slightly during spring speedup and early summer, sufficient to allow formation of 16% of moulins mapped in the study area. In contrast, 63% of moulins experience stresses over the tensile strength of ice during a short (hours) supraglacial lake drainage event. Lake drainages appear to control moulin density, which is itself a control on subglacial drainage efficiency and summer ice velocities.

  3. Interactions of a Pop5/Rpp1 heterodimer with the catalytic domain of RNase MRP.

    PubMed

    Perederina, Anna; Khanova, Elena; Quan, Chao; Berezin, Igor; Esakova, Olga; Krasilnikov, Andrey S

    2011-10-01

    Ribonuclease (RNase) MRP is a multicomponent ribonucleoprotein complex closely related to RNase P. RNase MRP and eukaryotic RNase P share most of their protein components, as well as multiple features of their catalytic RNA moieties, but have distinct substrate specificities. While RNase P is practically universally found in all three domains of life, RNase MRP is essential in eukaryotes. The structural organizations of eukaryotic RNase P and RNase MRP are poorly understood. Here, we show that Pop5 and Rpp1, protein components found in both RNase P and RNase MRP, form a heterodimer that binds directly to the conserved area of the putative catalytic domain of RNase MRP RNA. The Pop5/Rpp1 binding site corresponds to the protein binding site in bacterial RNase P RNA. Structural and evolutionary roles of the Pop5/Rpp1 heterodimer in RNases P and MRP are discussed.

  4. Interactions of a Pop5/Rpp1 heterodimer with the catalytic domain of RNase MRP

    PubMed Central

    Perederina, Anna; Khanova, Elena; Quan, Chao; Berezin, Igor; Esakova, Olga; Krasilnikov, Andrey S.

    2011-01-01

    Ribonuclease (RNase) MRP is a multicomponent ribonucleoprotein complex closely related to RNase P. RNase MRP and eukaryotic RNase P share most of their protein components, as well as multiple features of their catalytic RNA moieties, but have distinct substrate specificities. While RNase P is practically universally found in all three domains of life, RNase MRP is essential in eukaryotes. The structural organizations of eukaryotic RNase P and RNase MRP are poorly understood. Here, we show that Pop5 and Rpp1, protein components found in both RNase P and RNase MRP, form a heterodimer that binds directly to the conserved area of the putative catalytic domain of RNase MRP RNA. The Pop5/Rpp1 binding site corresponds to the protein binding site in bacterial RNase P RNA. Structural and evolutionary roles of the Pop5/Rpp1 heterodimer in RNases P and MRP are discussed. PMID:21878546

  5. A common neural circuit mechanism for internally guided and externally reinforced forms of motor learning.

    PubMed

    Hisey, Erin; Kearney, Matthew Gene; Mooney, Richard

    2018-04-01

    The complex skills underlying verbal and musical expression can be learned without external punishment or reward, indicating their learning is internally guided. The neural mechanisms that mediate internally guided learning are poorly understood, but a circuit comprising dopamine-releasing neurons in the midbrain ventral tegmental area (VTA) and their targets in the basal ganglia are important to externally reinforced learning. Juvenile zebra finches copy a tutor song in a process that is internally guided and, in adulthood, can learn to modify the fundamental frequency (pitch) of a target syllable in response to external reinforcement with white noise. Here we combined intersectional genetic ablation of VTA neurons, reversible blockade of dopamine receptors in the basal ganglia, and singing-triggered optogenetic stimulation of VTA terminals to establish that a common VTA-basal ganglia circuit enables internally guided song copying and externally reinforced syllable pitch learning.

  6. Causes of learning disability and epilepsy: a review.

    PubMed

    Prince, Elizabeth; Ring, Howard

    2011-04-01

    Although the association between learning disability and epilepsy is well known, until relatively recently specific processes underlying this association were relatively poorly understood. However, scientific advances in molecular biology are starting to guide researchers towards descriptions of genetic and pathophysiological processes that may explain why syndromes of epilepsy and learning disability often co-exist. This article will focus largely on three areas of advancing knowledge: insights gained from wider use of genome-wide array comparative genomic hybridization (aCGH), specific insights gained from detailed study of Rett syndrome and the role of abnormalities of astrocytic function in predisposing to both epilepsy and learning disability. The enormous complexity of the biological underpinnings of the co-occurrence of epilepsy and learning disability are becoming apparent. In the future it is likely that research into therapeutic approaches will include, amongst other approaches, investigations of gene structure and expression, the role of astrocytes and the stability of dendritic spines.

  7. First evidence of egg deposition by walleye (Sander vitreus) in the Detroit River

    USGS Publications Warehouse

    Manny, B.A.; Kennedy, G.W.; Allen, J.D.; French, J. R. P.

    2007-01-01

    The importance of fish spawning habitat in channels connecting the Great Lakes to fishery productivity in those lakes is poorly understood and has not been adequately documented. The Detroit River is a reputed spawning and nursery area for many fish, including walleye (Sander vitreus) that migrate between adjacent Lakes Erie and St. Clair. During April–May 2004, near the head of the Detroit River, we collected 136 fish eggs from the bottom of the river on egg mats. We incubated the eggs at the Great Lakes Science Center until they hatched. All eleven larvae that hatched from the eggs were identified as walleye. These eggs and larvae are the first credible scientific evidence that walleye spawn in the Detroit River. Their origin might be a stock of river-spawning walleye. Such a stock of walleye could potentially add resilience to production by walleye stocks that spawn and are harvested in adjacent waters.

  8. Comparison of deep neural networks to spatio-temporal cortical dynamics of human visual object recognition reveals hierarchical correspondence

    PubMed Central

    Cichy, Radoslaw Martin; Khosla, Aditya; Pantazis, Dimitrios; Torralba, Antonio; Oliva, Aude

    2016-01-01

    The complex multi-stage architecture of cortical visual pathways provides the neural basis for efficient visual object recognition in humans. However, the stage-wise computations therein remain poorly understood. Here, we compared temporal (magnetoencephalography) and spatial (functional MRI) visual brain representations with representations in an artificial deep neural network (DNN) tuned to the statistics of real-world visual recognition. We showed that the DNN captured the stages of human visual processing in both time and space from early visual areas towards the dorsal and ventral streams. Further investigation of crucial DNN parameters revealed that while model architecture was important, training on real-world categorization was necessary to enforce spatio-temporal hierarchical relationships with the brain. Together our results provide an algorithmically informed view on the spatio-temporal dynamics of visual object recognition in the human visual brain. PMID:27282108

  9. Comparison of deep neural networks to spatio-temporal cortical dynamics of human visual object recognition reveals hierarchical correspondence.

    PubMed

    Cichy, Radoslaw Martin; Khosla, Aditya; Pantazis, Dimitrios; Torralba, Antonio; Oliva, Aude

    2016-06-10

    The complex multi-stage architecture of cortical visual pathways provides the neural basis for efficient visual object recognition in humans. However, the stage-wise computations therein remain poorly understood. Here, we compared temporal (magnetoencephalography) and spatial (functional MRI) visual brain representations with representations in an artificial deep neural network (DNN) tuned to the statistics of real-world visual recognition. We showed that the DNN captured the stages of human visual processing in both time and space from early visual areas towards the dorsal and ventral streams. Further investigation of crucial DNN parameters revealed that while model architecture was important, training on real-world categorization was necessary to enforce spatio-temporal hierarchical relationships with the brain. Together our results provide an algorithmically informed view on the spatio-temporal dynamics of visual object recognition in the human visual brain.

  10. Disturbance and Plant Succession in the Mojave and Sonoran Deserts of the American Southwest

    PubMed Central

    Abella, Scott R.

    2010-01-01

    Disturbances such as fire, land clearing, and road building remove vegetation and can have major influences on public health through effects on air quality, aesthetics, recreational opportunities, natural resource availability, and economics. Plant recovery and succession following disturbance are poorly understood in arid lands relative to more temperate regions. This study quantitatively reviewed vegetation reestablishment following a variety of disturbances in the Mojave and Sonoran Deserts of southwestern North America. A total of 47 studies met inclusion criteria for the review. The time estimated by 29 individual studies for full reestablishment of total perennial plant cover was 76 years. Although long, this time was shorter than an estimated 215 years (among 31 individual studies) required for the recovery of species composition typical of undisturbed areas, assuming that recovery remains linear following the longest time since disturbance measurement made by the studies. PMID:20617030

  11. Changing subsistence practices at the Dorset Paleoeskimo site of Phillip's Garden, Newfoundland.

    PubMed

    Hodgetts, Lisa M; Renouf, M A P; Murray, Maribeth S; McCuaig-Balkwill, Darlene; Howse, Lesley

    2003-01-01

    A comparison of identified faunal assemblages from the Dorset site of Phillip's Garden indicates that harp seal hunting was the main focus of activity throughout the site's occupation. Despite the highly specialized nature of site use, it appears that reliance on harp seal decreased over time while fish and birds became increasingly important. These changes may reflect longer seasonal occupations at the site in later centuries, and/or a decrease in the local availability of harp seal. The observed shift coincides with the onset of a local climatic warming trend, which might have affected harp seal movements in the area. Dorset subsistence and settlement patterns in Newfoundland are still poorly understood due to a lack of preserved faunal assemblages in the region. The temporal trend illustrated here indicates that we cannot assume that these patterns were static throughout the Dorset occupation of the island.

  12. Identification of distinct telencephalic progenitor pools for neuronal diversity in the amygdala

    PubMed Central

    Hirata, Tsutomu; Li, Peijun; Lanuza, Guillermo M.; Cocas, Laura A.; Huntsman, Molly M.; Corbin, Joshua G.

    2009-01-01

    Development of the amygdala, a central structure of the limbic system, remains poorly understood. Using mouse as a model, our studies reveal that two spatially distinct and early specified telencephalic progenitor pools marked by the homeodomain transcription factor Dbx1 are major sources of neuronal cell diversity in the mature amygdala. We find that Dbx1+ cells of the ventral pallium (VP) generate excitatory neurons of the basolateral complex and cortical amygdala nuclei. Moreover, Dbx1-derived cells comprise a novel migratory stream that emanates from the preoptic area (POA), a ventral telencephalic domain adjacent to the diencephalic border. The Dbx1+ POA-derived population migrates specifically to the amygdala, and as defined by both immunochemical and electrophysiological criteria, generates a unique subclass of inhibitory neurons in the medial amygdala nucleus. Thus, this POA-derived population represents a novel progenitor pool dedicated to the limbic system. PMID:19136974

  13. Identification of distinct telencephalic progenitor pools for neuronal diversity in the amygdala.

    PubMed

    Hirata, Tsutomu; Li, Peijun; Lanuza, Guillermo M; Cocas, Laura A; Huntsman, Molly M; Corbin, Joshua G

    2009-02-01

    The development of the amygdala, a central structure of the limbic system, remains poorly understood. We found that two spatially distinct and early-specified telencephalic progenitor pools marked by the homeodomain transcription factor Dbx1 are major sources of neuronal cell diversity in the mature mouse amygdala. We found that Dbx1-positive cells of the ventral pallium generate the excitatory neurons of the basolateral complex and cortical amygdala nuclei. Moreover, Dbx1-derived cells comprise a previously unknown migratory stream that emanates from the preoptic area (POA), a ventral telencephalic domain adjacent to the diencephalic border. The Dbx1-positive, POA-derived population migrated specifically to the amygdala and, as defined by both immunochemical and electrophysiological criteria, generated a unique subclass of inhibitory neurons in the medial amygdala nucleus. Thus, this POA-derived population represents a previously unknown progenitor pool dedicated to the limbic system.

  14. Enhanced Dopamine-Dependent Hippocampal Plasticity after Single MK-801 Application

    PubMed Central

    Bartsch, Julia C; Fidzinski, Pawel; Huck, Jojanneke HJ; Hörtnagl, Heide; Kovács, Richard; Liotta, Agustin; Priller, Josef; Wozny, Christian; Behr, Joachim

    2015-01-01

    Dopaminergic hyperfunction and N-methyl-D-aspartate receptor (NMDAR) hypofunction have both been implicated in psychosis. Dopamine-releasing drugs and NMDAR antagonists replicate symptoms associated with psychosis in healthy humans and exacerbate symptoms in patients with schizophrenia. Though hippocampal dysfunction contributes to psychosis, the impact of NMDAR hypofunction on hippocampal plasticity remains poorly understood. Here, we used an NMDAR antagonist rodent model of psychosis to investigate hippocampal long-term potentiation (LTP). We found that single systemic NMDAR antagonism results in a region-specific, presynaptic LTP at hippocampal CA1-subiculum synapses that is induced by activation of D1/D5 dopamine receptors and modulated by L-type voltage-gated Ca2+ channels. Thereby, our findings may provide a cellular mechanism how NMDAR antagonism can lead to an enhanced hippocampal output causing activation of the hippocampus-ventral tegmental area-loop and overdrive of the dopamine system. PMID:25315194

  15. Impact of airway morphological changes on pulmonary flows in scoliosis

    NASA Astrophysics Data System (ADS)

    Farrell, James; Garrido, Enrique; Valluri, Prashant

    2016-11-01

    The relationship between thoracic deformity in scoliosis and lung function is poorly understood. In a pilot study, we reviewed computed tomography (CT) routine scans of patients undergoing scoliosis surgery. The CT scans were processed to segment the anatomy of the airways, lung and spine. A three-dimensional model was created to study the anatomical relationship. Preliminary analysis showed significant airway morphological differences depending on the anterior position of the spine. A computational fluid dynamics (CFD) study was also conducted on the airway geometry using the inspiratory scans. The CFD model assuming non-compliant airway walls was capable of showing pressure drops in areas of high airway resistance, but was unable to predict regional ventilation differences. Our results indicate a dependence between the dynamic deformation of the airway during breathing and lung function. Dynamic structural deformation must therefore be incorporated within any modelling approaches to guide clinicians on the decision to perform surgical correction of the scoliosis.

  16. The Sidi Ifni transect across the rifted margin of Morocco (Central Atlantic): Vertical movements constrained by low-temperature thermochronology

    NASA Astrophysics Data System (ADS)

    Charton, Rémi; Bertotti, Giovanni; Arantegui, Angel; Bulot, Luc

    2018-05-01

    The occurrence of km-scale exhumations during syn- and post-rift stages has been documented along Atlantic continental margins, which are also characterised by basins undergoing substantial subsidence. The relationship between the exhuming and subsiding domains is poorly understood. In this study, we reconstruct the evolution of a 50 km long transect across the Moroccan rifted margin from the western Anti-Atlas to the Atlantic basin offshore the city of Sidi Ifni. Low-temperature thermochronology data from the Sidi Ifni area document a ca. 8 km exhumation between the Permian and the Early/Middle Jurassic. The related erosion fed sediments to the subsiding Mesozoic basin to the NW. Basement rocks along the transect were subsequently buried by 1-2 km between the Late Jurassic and the Early Cretaceous. From late Early/Late Cretaceous onwards, rocks present along the transect were exhumed to their present-day position.

  17. Climate change reduces extent of temperate drylands and intensifies drought in deep soils

    USGS Publications Warehouse

    Schlaepfer, Daniel R.; Bradford, John B.; Lauenroth, William K.; Munson, Seth M.; Tietjen, Britta; Hall, Sonia A.; Wilson, Scott D.; Duniway, Michael C.; Jia, Gensuo; Pyke, David A.; Lkhagva, Ariuntsetseg; Jamiyansharav, Khishigbayar

    2017-01-01

    Drylands cover 40% of the global terrestrial surface and provide important ecosystem services. While drylands as a whole are expected to increase in extent and aridity in coming decades, temperature and precipitation forecasts vary by latitude and geographic region suggesting different trajectories for tropical, subtropical, and temperate drylands. Uncertainty in the future of tropical and subtropical drylands is well constrained, whereas soil moisture and ecological droughts, which drive vegetation productivity and composition, remain poorly understood in temperate drylands. Here we show that, over the twenty first century, temperate drylands may contract by a third, primarily converting to subtropical drylands, and that deep soil layers could be increasingly dry during the growing season. These changes imply major shifts in vegetation and ecosystem service delivery. Our results illustrate the importance of appropriate drought measures and, as a global study that focuses on temperate drylands, highlight a distinct fate for these highly populated areas.

  18. Climate change reduces extent of temperate drylands and intensifies drought in deep soils

    PubMed Central

    Schlaepfer, Daniel R.; Bradford, John B.; Lauenroth, William K.; Munson, Seth M.; Tietjen, Britta; Hall, Sonia A.; Wilson, Scott D.; Duniway, Michael C.; Jia, Gensuo; Pyke, David A.; Lkhagva, Ariuntsetseg; Jamiyansharav, Khishigbayar

    2017-01-01

    Drylands cover 40% of the global terrestrial surface and provide important ecosystem services. While drylands as a whole are expected to increase in extent and aridity in coming decades, temperature and precipitation forecasts vary by latitude and geographic region suggesting different trajectories for tropical, subtropical, and temperate drylands. Uncertainty in the future of tropical and subtropical drylands is well constrained, whereas soil moisture and ecological droughts, which drive vegetation productivity and composition, remain poorly understood in temperate drylands. Here we show that, over the twenty first century, temperate drylands may contract by a third, primarily converting to subtropical drylands, and that deep soil layers could be increasingly dry during the growing season. These changes imply major shifts in vegetation and ecosystem service delivery. Our results illustrate the importance of appropriate drought measures and, as a global study that focuses on temperate drylands, highlight a distinct fate for these highly populated areas. PMID:28139649

  19. Atomic structure and electronic properties of MgO grain boundaries in tunnelling magnetoresistive devices

    PubMed Central

    Bean, Jonathan J.; Saito, Mitsuhiro; Fukami, Shunsuke; Sato, Hideo; Ikeda, Shoji; Ohno, Hideo; Ikuhara, Yuichi; McKenna, Keith P.

    2017-01-01

    Polycrystalline metal oxides find diverse applications in areas such as nanoelectronics, photovoltaics and catalysis. Although grain boundary defects are ubiquitous their structure and electronic properties are very poorly understood since it is extremely challenging to probe the structure of buried interfaces directly. In this paper we combine novel plan-view high-resolution transmission electron microscopy and first principles calculations to provide atomic level understanding of the structure and properties of grain boundaries in the barrier layer of a magnetic tunnel junction. We show that the highly [001] textured MgO films contain numerous tilt grain boundaries. First principles calculations reveal how these grain boundaries are associated with locally reduced band gaps (by up to 3 eV). Using a simple model we show how shunting a proportion of the tunnelling current through grain boundaries imposes limits on the maximum magnetoresistance that can be achieved in devices. PMID:28374755

  20. Pigment cell interactions and differential xanthophore recruitment underlying zebrafish stripe reiteration and Danio pattern evolution

    PubMed Central

    Patterson, Larissa B.; Bain, Emily J.; Parichy, David M.

    2014-01-01

    Fishes have diverse pigment patterns, yet mechanisms of pattern evolution remain poorly understood. In zebrafish, Danio rerio, pigment-cell autonomous interactions generate dark stripes of melanophores that alternate with light interstripes of xanthophores and iridophores. Here, we identify mechanisms underlying the evolution of a uniform pattern in D. albolineatus in which all three pigment cell classes are intermingled. We show that in this species xanthophores differentiate precociously over a wider area, and that cis regulatory evolution has increased expression of xanthogenic Colony Stimulating Factor-1 (Csf1). Expressing Csf1 similarly in D. rerio has cascading effects, driving the intermingling of all three pigment cell classes and resulting in the loss of stripes, as in D. albolineatus. Our results identify novel mechanisms of pattern development and illustrate how pattern diversity can be generated when a core network of pigment-cell autonomous interactions is coupled with changes in pigment cell differentiation. PMID:25374113

  1. A missed Fe-S cluster handoff causes a metabolic shakeup.

    PubMed

    Berteau, Olivier

    2018-05-25

    The general framework of pathways by which iron-sulfur (Fe-S) clusters are assembled in cells is well-known, but the cellular consequences of disruptions to that framework are not fully understood. Crooks et al. report a novel cellular system that creates an acute Fe-S cluster deficiency, using mutants of ISCU, the main scaffold protein for Fe-S cluster assembly. Surprisingly, the resultant metabolic reprogramming leads to the accumulation of lipid droplets, a situation encountered in many poorly understood pathological conditions, highlighting unanticipated links between Fe-S assembly machinery and human disease. © 2018 Berteau.

  2. The mystery of a supposed massive star exploding in a brightest cluster galaxy

    NASA Astrophysics Data System (ADS)

    Hosseinzadeh, Griffin

    2017-08-01

    Most of the diversity of core-collapse supernovae results from late-stage mass loss by their progenitor stars. Supernovae that interact with circumstellar material (CSM) are a particularly good probe of these last stages of stellar evolution. Type Ibn supernovae are a rare and poorly understood class of hydrogen-poor explosions that show signs of interaction with helium-rich CSM. The leading hypothesis is that they are explosions of very massive Wolf-Rayet stars in which the supernova ejecta excites material previously lost by stellar winds. These massive stars have very short lifetimes, and therefore should only found in actively star-forming galaxies. However, PS1-12sk is a Type Ibn supernova found on the outskirts of a giant elliptical galaxy. As this is extraordinary unlikely, we propose to obtain deep UV images of the host environment of PS1-12sk in order to map nearby star formation and/or find a potential unseen star-forming host. If star formation is detected, its amount and location will provide deep insights into the progenitor picture for the poorly-understood Type Ibn class. If star formation is still not detected, these observations would challenge the well-accepted hypothesis that these are core-collapse supernovae at all.

  3. A Physiologically-Based Pharmacokinetic (PBPK) Model With Metabolic Interactions of Chloroform (CHCL3) and Trichloroethylene

    EPA Science Inventory

    Exposure to mixtures is frequent, but biologic pathways such as metabolic inhibition, are poorly understood. CHCl3 and TCE are model volatiles frequently co-occurring; combined exposure results in less than additive hepatotoxicity. Here, we explore the underlying metabolic inte...

  4. Advanced Pavement Design: Finite Element Modeling for Rigid Pavement Joints, Report II: Model Development

    DOT National Transportation Integrated Search

    1998-03-01

    The contribution of a cement-stabilized base course to the strength of the rigid pavement structure is poorly understood. The objective of this research was to obtain data on the response of the rigid pavement slab-joint-foundation system by conducti...

  5. NITROGEN OUTPUTS FROM FECAL AND URINE DEPOSITION OF SMALL MAMMALS: IMPLICATIONS FOR NITROGEN CYCLING

    EPA Science Inventory

    The contribution of small mammals to nitrogen cycling is poorly understood, but it could have reverberations back to the producer community by maintaining or perhaps magnifying nitrogen availability. Our objective was to model nitrogen outputs (deposition of feces and urine) of ...

  6. Accumulation of the antibiotic phenazine-1-carboxylic acid in the rhizosphere of dryland cereals

    USDA-ARS?s Scientific Manuscript database

    Natural antibiotics are thought to function in microbial defense, fitness, competitiveness, biocontrol, communication and gene regulation. However, the frequency and amount of antibiotics produced in nature are poorly understood. In this study, we assessed the geographic distribution of indigenous p...

  7. Genomic medicine and ethnic differences in cardiovascular disease risk

    USDA-ARS?s Scientific Manuscript database

    The origins of health disparities are a poorly understood public health problem. The effects of culture, environmental hazards, and social marginalization differ between ethnicities and have strong effects on health differences. The role of the genome in health is well established and we present a s...

  8. Extreme Precipitation and Emergency Room Visits for Influenza in Massachusetts: A Case-Crossover Analysis

    EPA Science Inventory

    BACKGROUND: Influenza peaks during the wintertime in temperate regions and during the annual rainy season in tropical regions – however reasons for the observed differences in disease ecology are poorly understood. We hypothesize that episodes of extreme precipitation also result...

  9. Interdependence of endomembrane trafficking and actin dynamics during polarized growth of Arabidopsis pollen tubes

    USDA-ARS?s Scientific Manuscript database

    During polarized growth of pollen tubes, endomembrane trafficking and actin polymerization are two critical processes that establish membrane/wall homeostasis and maintain growth polarity. Fine-tuned interactions between these two processes are therefore necessary but poorly understood. To better un...

  10. Flavonoids, alkali earth and rare earth elements affect germination of pecan pollen

    USDA-ARS?s Scientific Manuscript database

    The factors regulating pecan [Carya illinoinensis (Wangenh.) K. Koch] pollen grain germination on receptive stigmatic flower surfaces in vivo or in vitro in pollen viability assays are poorly understood. While there are many potential regulating factors, there is evidence for involvement of flavonol...

  11. Neural Correlates of Socioeconomic Status in the Developing Human Brain

    ERIC Educational Resources Information Center

    Noble, Kimberly G.; Houston, Suzanne M.; Kan, Eric; Sowell, Elizabeth R.

    2012-01-01

    Socioeconomic disparities in childhood are associated with remarkable differences in cognitive and socio-emotional development during a time when dramatic changes are occurring in the brain. Yet, the neurobiological pathways through which socioeconomic status (SES) shapes development remain poorly understood. Behavioral evidence suggests that…

  12. Gastrointestinal toxicity, systemic inflammation, and liver biochemistry in allogeneic hematopoietic stem cell transplantation

    USDA-ARS?s Scientific Manuscript database

    Liver toxicity is frequently seen in relation to allogeneic hematopoietic stem cell transplantation (HSCT), but pathogenesis and the risk factors are poorly understood. The purpose of this study was to investigate associations between liver toxicity, gastrointestinal toxicity, and levels of immune-r...

  13. NITROGEN OUTPUTS OF SMALL MAMMALS FROM FECAL AND URINE DEPOSITION: IMPLICATIONS FOR NITROGEN CYCLING

    EPA Science Inventory

    The contribution of small mammals in nitrogen cycling is poorly understood and could have reverberations back to the producer community by maintaining or even magnifying increased nitrogen availability. Our objective was to model nitrogen outputs (deposition of feces and urine) ...

  14. Feeding behavior and injury caused by Lygus hesperus

    USDA-ARS?s Scientific Manuscript database

    Despite the importance of Lygus hesperus as a crop pest in the western United States, key aspects of its feeding behavior and consequent injury to cotton are poorly understood. Previous studies of Lygus stage-dependent injury to cotton produced conflicting results. We sought to clarify these relat...

  15. Structural Equations and Causal Explanations: Some Challenges for Causal SEM

    ERIC Educational Resources Information Center

    Markus, Keith A.

    2010-01-01

    One common application of structural equation modeling (SEM) involves expressing and empirically investigating causal explanations. Nonetheless, several aspects of causal explanation that have an impact on behavioral science methodology remain poorly understood. It remains unclear whether applications of SEM should attempt to provide complete…

  16. Association between fertilizer-mediated changes in microbial communities and Aedes albopictus growth and survival

    USDA-ARS?s Scientific Manuscript database

    Contamination of aquatic habitats with anthropogenic nutrients has been associated with an increase in mosquito larval populations but the underlying mechanisms remain poorly understood. We examined the individual and combined effects of two synthetic fertilizers (ammonium sulfate and potassium chlo...

  17. Verbal Understanding and Pavlovian Processes

    ERIC Educational Resources Information Center

    Tonneau, François

    2004-01-01

    The behavioral processes through which people react appropriately to verbal descriptions remain poorly understood. I argue here that these processes are Pavlovian. Common objections to a Pavlovian account of symbolic behavior evidence a lack of familiarity with the relevant data or misunderstandings of operant theory. Although much remains to be…

  18. Redefining the Longitude/Latitude Experience with a Scaffolded Geocache

    ERIC Educational Resources Information Center

    Hammond, Thomas; Bozdin, Alec M.; Stanlick, Sarah E.

    2014-01-01

    Latitude and longitude are foundational concepts for geography education, yet they are typically poorly understood by students and receive indifferent attention from instructors and publishers' materials. Social studies teachers can take advantage of increasingly ubiquitous geolocating devices such as Global Positions Systems (GPS) to provide…

  19. Wheat streak mosaic virus coat protein is a host-specific long-distance transport determinant in oat

    USDA-ARS?s Scientific Manuscript database

    Viral determinants involved in systemic infection of hosts by monocot-infecting plant viruses are poorly understood. Wheat streak mosaic virus (WSMV, genus Tritimovirus, family Potyviridae) exclusively infects monocotyledonous crops such as wheat, oat, barley, maize, triticale, and rye. Previously, ...

  20. Genotype-specific responses of apple roots to pathogenic infection by Pythium ultimum

    USDA-ARS?s Scientific Manuscript database

    Resistance mechanisms employed to defend against soilborne necrotrophic pathogens are poorly understood, particularly with respect to perennial tree fruit crops such as apple. Pythium ultimum is a component of the pathogen complex that incites apple replant disease (ARD). Different levels of tolera...

  1. The Structure of Integral Dimensions: Contrasting Topological and Cartesian Representations

    ERIC Educational Resources Information Center

    Jones, Matt; Goldstone, Robert L.

    2013-01-01

    Diverse evidence shows that perceptually integral dimensions, such as those composing color, are represented holistically. However, the nature of these holistic representations is poorly understood. Extant theories, such as those founded on multidimensional scaling or general recognition theory, model integral stimulus spaces using a Cartesian…

  2. Speleothems as Examples of Chemical Equilibrium Processes.

    ERIC Educational Resources Information Center

    Wilson, James R.

    1984-01-01

    The chemical formation of speleothems such as stalactites and stalagmites is poorly understood by introductory geology instructors and misrepresented in most textbooks. Although evaporation may be a controlling factor in some caves, it is necessary to consider chemical precipitation as more important in controlling the diagenesis of calcium…

  3. Aboveground and belowground net primary production

    Treesearch

    Hal O. Liechty; Mark H. Eisenbies

    2000-01-01

    The relationship among net primary productivity (NPP), hydroperiod, and fertility in forested wetlands is poorly understood (Burke and others 1999), particularly with respect to belowground NPP (Megonigal and others 1997). Although some researchers have studied aboveground and belowground primary production in depressional, forested wetland systems, e.g., Day and...

  4. Remote Sensing and Underwater Glider Observations of a Springtime Plume in Western Lake Superior

    EPA Science Inventory

    Plumes are commonly observed in satellite imagery of western Lake Superior following storm events, and represent a significant cross-shelf pathway for sediment and other constituents. However, their subsurface extent is poorly understood. This study reports results from plume ob...

  5. Effects of Rhododendron maximum L. on Acer rubrum L. Seedling Establishment

    Treesearch

    Barton D. Clinton; James M. Vose

    1996-01-01

    Rhododendron maximum L. restricts regeneration of overstory species; however, the mechanisms are poorly understood. Three treatments were used to examine the effects of R. maximum germination success and survival of Acer rubrum L. under a closed overstory canopy: (1) R. maximum understory, (2)...

  6. PHOTOSYNTHETIC RESPONSES OF VALLISNERIA AMERICANA FOLLOWING EXPOSURE TO ATRAZINE AT THREE NUTRIENT REGIMES

    EPA Science Inventory

    The effects of anthropogenic contaminants on Gulf of Mexico plant communities are poorly understood despite the threatened condition of a number of seagrass communities and wetland habitats. In this study, we focused particular attention on the concern that elevated nutrient
    l...

  7. The Psychophysiological Mechanisms of Alexithymia in Autism Spectrum Disorder

    ERIC Educational Resources Information Center

    Gaigg, Sebastian B.; Cornell, Anna S. F.; Bird, Geoffrey

    2018-01-01

    Accumulating evidence indicates that co-occurring alexithymia underlies several facets of the social-emotional difficulties common in individuals with autism spectrum disorder. The mechanisms involved, however, remain poorly understood because measuring alexithymia relies heavily on self-report. To address this issue, carefully matched groups of…

  8. Sugary beverage intake and preclinical Alzheimer's disease in the community

    USDA-ARS?s Scientific Manuscript database

    IMPORTANCE: Sugary beverages are a key component of the Western diet, yet the long-term effects of these beverages on the brain are poorly understood. OBJECTIVE: To determine whether habitual sugary beverage consumption is associated with markers of preclinical Alzheimers disease (AD) and/or vascu...

  9. Spread and development of Phytophthora ramorum in a California christmas tree farm

    Treesearch

    Gary A. Chastagner; Kathy Riley; Norm Dart

    2008-01-01

    The risk of conifers being infected by Phytophthora ramorum under natural conditions is poorly understood. In California, infected conifers commonly occur as understory plants beneath or adjacent to heavily infected plants like California bay laurel (Umbellularia californica). During wet periods, P. ramorum is...

  10. Satellite observation of particulate organic carbon dynamics on the Louisiana continental shelf

    EPA Science Inventory

    Particulate organic carbon (POC) plays an important role in coastal carbon cycling and the formation of hypoxia. Yet, coastal POC dynamics are often poorly understood due to a lack of long-term POC observations and the complexity of coastal hydrodynamic and biogeochemical process...

  11. HYDRAULIC REDISTRIBUTION IN A DOUGLAS-FIR FOREST: LESSONS FROM SYSTEM MANIPULATIONS

    EPA Science Inventory

    Hydraulic redistribution (HR) has been shown to slow drying of surface soils during drought in Pacific Northwest forests, but the controls governing this process and its importance to shallow-rooted species are poorly understood. Our objective in this study was to manipulate the...

  12. Identification of a Pathway for Perfluorocompounds to Human Diet from Application of Biosolids to Agricultural Fields

    EPA Science Inventory

    Perfluoro compounds are ubiquitous contaminants in human blood. The pathways which result in near universal exposure to humans in modern societies are not clearly understood. Sources to environmental compartments and transport between compartments are only poorly studies, and thi...

  13. Glucose supplementation has minimal effects on blood neutrophil functionand gene expression in vitro

    USDA-ARS?s Scientific Manuscript database

    During early lactation, glucose availability is low and the effect of glucose supply on bovine polymorphonuclear leukocyte (PMNL) function is poorly understood. The objective of this study was to determine the effect of glucose supplementation on the function and transcriptomic inflammatory respons...

  14. The water balance components of undisturbed tropical woodlands in the Brazilian cerrado

    USDA-ARS?s Scientific Manuscript database

    Deforestation of the Brazilian cerrado region has caused major changes in hydrological processes. These changes in water balance components are still poorly understood but are important for making land management decisions in this region. To better understand pre-deforestation conditions, we determi...

  15. Soil type and species diversity influence selection on physiology in Panicum virgatum

    USDA-ARS?s Scientific Manuscript database

    Species diversity influences the productivity and stability of plant communities, but its effect on the evolution of species within those communities is poorly understood. In this study, we tested whether species diversity and soil type influence selection on physiology in switchgrass (Panicum virga...

  16. Mechanisms of increased lifespan in hypoxia in the alfalfa leafcutting bee, Megachile rotundata

    USDA-ARS?s Scientific Manuscript database

    Genetic variation accounts for a small amount of variation in lifespan, while environmental stressors are strong predictors. Hypoxia is an environmental stress that increases longevity in some contexts, but the mechanisms remain poorly understood. In the bee Megachile rotundata, lifespan doubles upo...

  17. The role of the uplift of the Qinghai-Tibetan Plateau for the evolution of Tibetan biotas.

    PubMed

    Favre, Adrien; Päckert, Martin; Pauls, Steffen U; Jähnig, Sonja C; Uhl, Dieter; Michalak, Ingo; Muellner-Riehl, Alexandra N

    2015-02-01

    Biodiversity is unevenly distributed on Earth and hotspots of biodiversity are often associated with areas that have undergone orogenic activity during recent geological history (i.e. tens of millions of years). Understanding the underlying processes that have driven the accumulation of species in some areas and not in others may help guide prioritization in conservation and may facilitate forecasts on ecosystem services under future climate conditions. Consequently, the study of the origin and evolution of biodiversity in mountain systems has motivated growing scientific interest. Despite an increasing number of studies, the origin and evolution of diversity hotspots associated with the Qinghai-Tibetan Plateau (QTP) remains poorly understood. We review literature related to the diversification of organisms linked to the uplift of the QTP. To promote hypothesis-based research, we provide a geological and palaeoclimatic scenario for the region of the QTP and argue that further studies would benefit from providing a complete set of complementary analyses (molecular dating, biogeographic, and diversification rates analyses) to test for a link between organismic diversification and past geological and climatic changes in this region. In general, we found that the contribution of biological interchange between the QTP and other hotspots of biodiversity has not been sufficiently studied to date. Finally, we suggest that the biological consequences of the uplift of the QTP would be best understood using a meta-analysis approach, encompassing studies on a variety of organisms (plants and animals) from diverse habitats (forests, meadows, rivers), and thermal belts (montane, subalpine, alpine, nival). Since the species diversity in the QTP region is better documented for some organismic groups than for others, we suggest that baseline taxonomic work should be promoted. © 2014 The Authors. Biological Reviews published by John Wiley & Sons Ltd on behalf of Cambridge Philosophical Society.

  18. Spatial-area selective retrieval of multiple object-place associations in a hierarchical cognitive map formed by theta phase coding.

    PubMed

    Sato, Naoyuki; Yamaguchi, Yoko

    2009-06-01

    The human cognitive map is known to be hierarchically organized consisting of a set of perceptually clustered landmarks. Patient studies have demonstrated that these cognitive maps are maintained by the hippocampus, while the neural dynamics are still poorly understood. The authors have shown that the neural dynamic "theta phase precession" observed in the rodent hippocampus may be capable of forming hierarchical cognitive maps in humans. In the model, a visual input sequence consisting of object and scene features in the central and peripheral visual fields, respectively, results in the formation of a hierarchical cognitive map for object-place associations. Surprisingly, it is possible for such a complex memory structure to be formed in a few seconds. In this paper, we evaluate the memory retrieval of object-place associations in the hierarchical network formed by theta phase precession. The results show that multiple object-place associations can be retrieved with the initial cue of a scene input. Importantly, according to the wide-to-narrow unidirectional connections among scene units, the spatial area for object-place retrieval can be controlled by the spatial area of the initial cue input. These results indicate that the hierarchical cognitive maps have computational advantages on a spatial-area selective retrieval of multiple object-place associations. Theta phase precession dynamics is suggested as a fundamental neural mechanism of the human cognitive map.

  19. Size-dependent physiological responses of the branching coral Pocillopora verrucosa to elevated temperature and PCO2.

    PubMed

    Edmunds, Peter J; Burgess, Scott C

    2016-12-15

    Body size has large effects on organism physiology, but these effects remain poorly understood in modular animals with complex morphologies. Using two trials of a ∼24 day experiment conducted in 2014 and 2015, we tested the hypothesis that colony size of the coral Pocillopora verrucosa affects the response of calcification, aerobic respiration and gross photosynthesis to temperature (∼26.5 and ∼29.7°C) and P CO 2  (∼40 and ∼1000 µatm). Large corals calcified more than small corals, but at a slower size-specific rate; area-normalized calcification declined with size. Whole-colony and area-normalized calcification were unaffected by temperature, P CO 2 , or the interaction between the two. Whole-colony respiration increased with colony size, but the slopes of these relationships differed between treatments. Area-normalized gross photosynthesis declined with colony size, but whole-colony photosynthesis was unaffected by P CO 2 , and showed a weak response to temperature. When scaled up to predict the response of large corals, area-normalized metrics of physiological performance measured using small corals provide inaccurate estimates of the physiological performance of large colonies. Together, these results demonstrate the importance of colony size in modulating the response of branching corals to elevated temperature and high P CO 2 . © 2016. Published by The Company of Biologists Ltd.

  20. Multiple Pathways to Bacterial Load Reduction by Stormwater Best Management Practices: Trade-Offs in Performance, Volume, and Treated Area.

    PubMed

    Wolfand, Jordyn M; Bell, Colin D; Boehm, Alexandria B; Hogue, Terri S; Luthy, Richard G

    2018-06-05

    Stormwater best management practices (BMPs) are implemented to reduce microbial pollution in runoff, but their removal efficiencies differ. Enhanced BMPs, such as those with media amendments, can increase removal of fecal indicator bacteria (FIB) in runoff from 0.25-log 10 to above 3-log 10 ; however, their implications for watershed-scale management are poorly understood. In this work, a computational model was developed to simulate watershed-scale bacteria loading and BMP performance using the Ballona Creek Watershed (Los Angeles County, CA) as a case study. Over 1400 scenarios with varying BMP performance, percent watershed area treated, BMP treatment volume, and infiltrative capabilities were simulated. Incremental improvement of BMP performance by 0.25-log 10 , while keeping other scenario variables constant, reduces annual bacterial load at the outlet by a range of 0-29%. In addition, various simulated scenarios provide the same FIB load reduction; for example, 75% load reduction is achieved by diverting runoff from either 95% of the watershed area to 25 000 infiltrating BMPs with 0.5-log 10 removal or 75% of the watershed area to 75 000 infiltrating BMPs with 1.5-log 10 removal. Lastly, simulated infiltrating BMPs provide greater FIB reduction than noninfiltrating BMPs at the watershed scale. Results provide new insight on the trade-offs between BMP treatment volume, performance, and distribution.

  1. Impacts of long-term precipitation manipulation on hydraulic architecture and xylem anatomy of piñon and juniper in Southwest USA.

    PubMed

    Hudson, P J; Limousin, J M; Krofcheck, D J; Boutz, A L; Pangle, R E; Gehres, N; McDowell, N G; Pockman, W T

    2018-02-01

    Hydraulic architecture imposes a fundamental control on water transport, underpinning plant productivity, and survival. The extent to which hydraulic architecture of mature trees acclimates to chronic drought is poorly understood, limiting accuracy in predictions of forest responses to future droughts. We measured seasonal shoot hydraulic performance for multiple years to assess xylem acclimation in mature piñon (Pinus edulis) and juniper (Juniperus monosperma) after 3+ years of precipitation manipulation. Our treatments consisted of water addition (+20% ambient precipitation), partial precipitation-exclusion (-45% ambient precipitation), and exclusion-structure control. Supplemental watering elevated leaf water potential, sapwood-area specific hydraulic conductivity, and leaf-area specific hydraulic conductivity relative to precipitation exclusion. Shifts in allocation of leaf area to sapwood area enhanced differences between irrigated and droughted K L in piñon but not juniper. Piñon and juniper achieved similar K L under ambient conditions, but juniper matched or outperformed piñon in all physiological measurements under both increased and decreased precipitation treatments. Embolism vulnerability and xylem anatomy were unaffected by treatments in either species. Absence of significant acclimation combined with inferior performance for both hydraulic transport and safety suggests piñon has greater risk of local extirpation if aridity increases as predicted in the southwestern USA. © 2017 John Wiley & Sons Ltd.

  2. Evidence synthesis and its role in evidence-based health care.

    PubMed

    Pearson, Alan

    2014-12-01

    The central role of evidence synthesis (or the systematic review of evidence) in evidence-based health care is often poorly understood. There are numerous examples in the literature of poorly conceived and/or executed systematic reviews and of a lack of awareness of the international standards developed by the international leaders in systematic reviews. The Cochrane Collaboration has played a critical global role in developing and refining systematic review methods in relation to evidence of effects and of diagnostic accuracy. Copyright © 2014 Elsevier Inc. All rights reserved.

  3. Altered functional connectivity of the language network in ASD: Role of classical language areas and cerebellum☆

    PubMed Central

    Verly, Marjolein; Verhoeven, Judith; Zink, Inge; Mantini, Dante; Peeters, Ronald; Deprez, Sabine; Emsell, Louise; Boets, Bart; Noens, Ilse; Steyaert, Jean; Lagae, Lieven; De Cock, Paul; Rommel, Nathalie; Sunaert, Stefan

    2014-01-01

    The development of language, social interaction and communicative skills is remarkably different in the child with autism spectrum disorder (ASD). Atypical brain connectivity has frequently been reported in this patient population. However, the neural correlates underlying their disrupted language development and functioning are still poorly understood. Using resting state fMRI, we investigated the functional connectivity properties of the language network in a group of ASD patients with clear comorbid language impairment (ASD-LI; N = 19) and compared them to the language related connectivity properties of 23 age-matched typically developing children. A verb generation task was used to determine language components commonly active in both groups. Eight joint language components were identified and subsequently used as seeds in a resting state analysis. Interestingly, both the interregional and the seed-based whole brain connectivity analysis showed preserved connectivity between the classical intrahemispheric language centers, Wernicke's and Broca's areas. In contrast however, a marked loss of functional connectivity was found between the right cerebellar region and the supratentorial regulatory language areas. Also, the connectivity between the interhemispheric Broca regions and modulatory control dorsolateral prefrontal region was found to be decreased. This disruption of normal modulatory control and automation function by the cerebellum may underlie the abnormal language function in children with ASD-LI. PMID:24567909

  4. Effect of electrode sub-micron surface feature size on current generation of Shewanella oneidensis in microbial fuel cells

    NASA Astrophysics Data System (ADS)

    Ye, Zhou; Ellis, Michael W.; Nain, Amrinder S.; Behkam, Bahareh

    2017-04-01

    Microbial fuel cells (MFCs) are envisioned to serve as compact and sustainable sources of energy; however, low current and power density have hindered their widespread use. Introduction of 3D micro/nanostructures on the MFC anode is known to improve its performance by increasing the surface area available for bacteria attachment; however, the role of the feature size remains poorly understood. To delineate the role of feature size from the ensuing surface area increase, nanostructures with feature heights of 115 nm and 300 nm, both at a height to width aspect ratio of 0.3, are fabricated in a grid pattern on glassy carbon electrodes (GCEs). Areal current densities and bacteria attachment densities of the patterned and unpatterned GCEs are compared using Shewanella oneidensis Δbfe in a three-electrode bioreactor. The 115 nm features elicit a remarkable 40% increase in current density and a 78% increase in bacterial attachment density, whereas the GCE with 300 nm pattern does not exhibit significant change in current density or bacterial attachment density. The current density dependency on feature size is maintained over the entire 160 h experiment. Thus, optimally sized surface features have a substantial effect on current production that is independent of their effect on surface area.

  5. Effective connectivity inferred from fMRI transition dynamics during movie viewing points to a balanced reconfiguration of cortical interactions.

    PubMed

    Gilson, Matthieu; Deco, Gustavo; Friston, Karl J; Hagmann, Patric; Mantini, Dante; Betti, Viviana; Romani, Gian Luca; Corbetta, Maurizio

    2017-10-09

    Our behavior entails a flexible and context-sensitive interplay between brain areas to integrate information according to goal-directed requirements. However, the neural mechanisms governing the entrainment of functionally specialized brain areas remain poorly understood. In particular, the question arises whether observed changes in the regional activity for different cognitive conditions are explained by modifications of the inputs to the brain or its connectivity? We observe that transitions of fMRI activity between areas convey information about the tasks performed by 19 subjects, watching a movie versus a black screen (rest). We use a model-based framework that explains this spatiotemporal functional connectivity pattern by the local variability for 66 cortical regions and the network effective connectivity between them. We find that, among the estimated model parameters, movie viewing affects to a larger extent the local activity, which we interpret as extrinsic changes related to the increased stimulus load. However, detailed changes in the effective connectivity preserve a balance in the propagating activity and select specific pathways such that high-level brain regions integrate visual and auditory information, in particular boosting the communication between the two brain hemispheres. These findings speak to a dynamic coordination underlying the functional integration in the brain. Copyright © 2017. Published by Elsevier Inc.

  6. Complex movement patterns of greenback flounder (Rhombosolea tapirina) in the Murray River estuary and Coorong, Australia

    NASA Astrophysics Data System (ADS)

    Earl, Jason; Fowler, Anthony J.; Ye, Qifeng; Dittmann, Sabine

    2017-04-01

    The greenback flounder Rhombosolea tapirina is a commercially-important flatfish species in southern Australia and New Zealand, whose population dynamics are poorly understood. Acoustic telemetry was used to assess movement patterns and area use for R. tapirina in the Murray River estuary and Coorong, South Australia. Twenty fish (221-313 mm total length) equipped with acoustic transmitters were monitored for up to seven months during a period of high freshwater inflow. Fish were detected over a large part of the system, but showed a strong preference for brackish and near-marine conditions in the inner estuary. Tagged fish exhibited complex movement patterns that differed among individuals, including: (1) within estuary movements; (2) dispersal from the estuary to the sea; and (3) return migrations between the estuary and the sea. A diurnal shift in fine-scale area use was observed in the part of the estuary where residency was highest, with individuals occupying deeper habitats during the day and shallower areas during the night. The results demonstrate the individualistic and often highly transient behaviour of this species and its ability to undertake regular movements over the spatial scale of 10s of km. Understanding such movement patterns can improve effective management of estuarine flatfish populations and ecosystems.

  7. Spatial predictions of Rhodesian Human African Trypanosomiasis (sleeping sickness) prevalence in Kaberamaido and Dokolo, two newly affected districts of Uganda.

    PubMed

    Batchelor, Nicola A; Atkinson, Peter M; Gething, Peter W; Picozzi, Kim; Fèvre, Eric M; Kakembo, Abbas S L; Welburn, Susan C

    2009-12-15

    The continued northwards spread of Rhodesian sleeping sickness or Human African Trypanosomiasis (HAT) within Uganda is raising concerns of overlap with the Gambian form of the disease. Disease convergence would result in compromised diagnosis and treatment for HAT. Spatial determinants for HAT are poorly understood across small areas. This study examines the relationships between Rhodesian HAT and several environmental, climatic and social factors in two newly affected districts, Kaberamaido and Dokolo. A one-step logistic regression analysis of HAT prevalence and a two-step logistic regression method permitted separate analysis of both HAT occurrence and HAT prevalence. Both the occurrence and prevalence of HAT were negatively correlated with distance to the closest livestock market in all models. The significance of distance to the closest livestock market strongly indicates that HAT may have been introduced to this previously unaffected area via the movement of infected, untreated livestock from endemic areas. This illustrates the importance of the animal reservoir in disease transmission, and highlights the need for trypanosomiasis control in livestock and the stringent implementation of regulations requiring the treatment of cattle prior to sale at livestock markets to prevent any further spread of Rhodesian HAT within Uganda.

  8. Strong Functional Connectivity among Homotopic Brain Areas Is Vital for Motor Control in Unilateral Limb Movement.

    PubMed

    Wei, Pengxu; Zhang, Zuting; Lv, Zeping; Jing, Bin

    2017-01-01

    The mechanism underlying brain region organization for motor control in humans remains poorly understood. In this functional magnetic resonance imaging (fMRI) study, right-handed volunteers were tasked to maintain unilateral foot movements on the right and left sides as consistently as possible. We aimed to identify the similarities and differences between brain motor networks of the two conditions. We recruited 18 right-handed healthy volunteers aged 25 ± 2.3 years and used a whole-body 3T system for magnetic resonance (MR) scanning. Image analysis was performed using SPM8, Conn toolbox and Brain Connectivity Toolbox. We determined a craniocaudally distributed, mirror-symmetrical modular structure. The functional connectivity between homotopic brain areas was generally stronger than the intrahemispheric connections, and such strong connectivity led to the abovementioned modular structure. Our findings indicated that the interhemispheric functional interaction between homotopic brain areas is more intensive than the interaction along the conventional top-down and bottom-up pathways within the brain during unilateral limb movement. The detected strong interhemispheric horizontal functional interaction is an important aspect of motor control but often neglected or underestimated. The strong interhemispheric connectivity may explain the physiological phenomena and effects of promising therapeutic approaches. Further accurate and effective therapeutic methods may be developed on the basis of our findings.

  9. Sentence understanding depends on contextual use of semantic and real world knowledge.

    PubMed

    Tune, Sarah; Schlesewsky, Matthias; Nagels, Arne; Small, Steven L; Bornkessel-Schlesewsky, Ina

    2016-08-01

    Human language allows us to express our thoughts and ideas by combining entities, concepts and actions into multi-event episodes. Yet, the functional neuroanatomy engaged in interpretation of such high-level linguistic input remains poorly understood. Here, we used easy to detect and more subtle "borderline" anomalies to investigate the brain regions and mechanistic principles involved in the use of real-world event knowledge in language comprehension. Overall, the results showed that the processing of sentences in context engages a complex set of bilateral brain regions in the frontal, temporal and inferior parietal lobes. Easy anomalies preferentially engaged lower-order cortical areas adjacent to the primary auditory cortex. In addition, the left supramarginal gyrus and anterior temporal sulcus as well as the right posterior middle temporal gyrus contributed to the processing of easy and borderline anomalies. The observed pattern of results is explained in terms of (i) hierarchical processing along a dorsal-ventral axis and (ii) the assumption of high-order association areas serving as cortical hubs in the convergence of information in a distributed network. Finally, the observed modulation of BOLD signal in prefrontal areas provides support for their role in the implementation of executive control processes. Copyright © 2016 Elsevier Inc. All rights reserved.

  10. Prey use by dingoes in a contested landscape: Ecosystem service provider or biodiversity threat?

    PubMed

    Morrant, Damian S; Wurster, Christopher M; Johnson, Christopher N; Butler, James R A; Congdon, Bradley C

    2017-11-01

    In Australia, dingoes ( Canis lupus dingo ) have been implicated in the decline and extinction of a number of vertebrate species. The lowland Wet Tropics of Queensland, Australia is a biologically rich area with many species of rainforest-restricted vertebrates that could be threatened by dingoes; however, the ecological impacts of dingoes in this region are poorly understood. We determined the potential threat posed by dingoes to native vertebrates in the lowland Wet Tropics using dingo scat/stomach content and stable isotope analyses of hair from dingoes and potential prey species. Common mammals dominated dingo diets. We found no evidence of predation on threatened taxa or rainforest specialists within our study areas. The most significant prey species were northern brown bandicoots ( Isoodon macrourus ), canefield rats ( Rattus sordidus ), and agile wallabies ( Macropus agilis ). All are common species associated with relatively open grass/woodland habitats. Stable isotope analysis suggested that prey species sourced their nutrients primarily from open habitats and that prey choice, as identified by scat/stomach analysis alone, was a poor indicator of primary foraging habitats. In general, we find that prey use by dingoes in the lowland Wet Tropics does not pose a major threat to native and/or threatened fauna, including rainforest specialists. In fact, our results suggest that dingo predation on "pest" species may represent an important ecological service that outweighs potential biodiversity threats. A more targeted approach to managing wild canids is needed if the ecosystem services they provide in these contested landscapes are to be maintained, while simultaneously avoiding negative conservation or economic impacts.

  11. Linear and nonlinear auditory response properties of interneurons in a high-order avian vocal motor nucleus during wakefulness.

    PubMed

    Raksin, Jonathan N; Glaze, Christopher M; Smith, Sarah; Schmidt, Marc F

    2012-04-01

    Motor-related forebrain areas in higher vertebrates also show responses to passively presented sensory stimuli. However, sensory tuning properties in these areas, especially during wakefulness, and their relation to perception, are poorly understood. In the avian song system, HVC (proper name) is a vocal-motor structure with auditory responses well defined under anesthesia but poorly characterized during wakefulness. We used a large set of stimuli including the bird's own song (BOS) and many conspecific songs (CON) to characterize auditory tuning properties in putative interneurons (HVC(IN)) during wakefulness. Our findings suggest that HVC contains a diversity of responses that vary in overall excitability to auditory stimuli, as well as bias in spike rate increases to BOS over CON. We used statistical tests to classify cells in order to further probe auditory responses, yielding one-third of neurons that were either unresponsive or suppressed and two-thirds with excitatory responses to one or more stimuli. A subset of excitatory neurons were tuned exclusively to BOS and showed very low linearity as measured by spectrotemporal receptive field analysis (STRF). The remaining excitatory neurons responded well to CON stimuli, although many cells still expressed a bias toward BOS. These findings suggest the concurrent presence of a nonlinear and a linear component to responses in HVC, even within the same neuron. These characteristics are consistent with perceptual deficits in distinguishing BOS from CON stimuli following lesions of HVC and other song nuclei and suggest mirror neuronlike qualities in which "self" (here BOS) is used as a referent to judge "other" (here CON).

  12. A multidimensional approach to measure poverty in rural Bangladesh.

    PubMed

    Bhuiya, Abbas; Mahmood, Shehrin Shaila; Rana, A K M Masud; Wahed, Tania; Ahmed, Syed Masud; Chowdhury, A Mushtaque R

    2007-06-01

    Poverty is increasingly being understood as a multidimensional phenomenon. Other than income-consumption, which has been extensively studied in the past, health, education, shelter, and social involvement are among the most important dimensions of poverty. The present study attempts to develop a simple tool to measure poverty in its multidimensionality where it views poverty as an inadequate fulfillment of basic needs, such as food, clothing, shelter, health, education, and social involvement. The scale score ranges between 72 and 24 and is constructed in such a way that the score increases with increasing level of poverty. Using various techniques, the study evaluates the poverty-measurement tool and provides evidence for its reliability and validity by administering it in various areas of rural Bangladesh. The reliability coefficients, such as test-retest coefficient (0.85) and Cronbach's alpha (0.80) of the tool, were satisfactorily high. Based on the socioeconomic status defined by the participatory rural appraisal (PRA) exercise, the level of poverty identified by the scale was 33% in Chakaria, 26% in Matlab, and 32% in other rural areas of the country. The validity of these results was tested against some traditional methods of identifying the poor, and the association of the scores with that of the traditional indicators, such as ownership of land and occupation, asset index (r=0.72), and the wealth ranking obtained from the PRA exercise, was consistent. A statistically significant inverse relationship of the poverty scores with the socioeconomic status was observed in all cases. The scale also allowed the absolute level of poverty to be measured, and in the present study, the highest percentage of absolute poor was found in terms of health (44.2% in Chakaria, 36.4% in Matlab, and 39.1% in other rural areas), followed by social exclusion (35.7% in Chakaria, 28.5% in Matlab, and 22.3% in other rural areas), clothing (6.2% in Chakaria, 8.3% in Matlab, and 20% in other rural areas), education (14.7% in Chakaria, 8% in Matlab, and 16.8% in other rural areas), food (7.8% in Chakaria, 2.9% in Matlab and 3% in other rural areas), and shelter (0.8% in Chakaria, 1.4% in Matlab, and 3.7% in other rural areas). This instrument will also prove itself invaluable in assessing the individual effects of poverty-alleviation programmes or policies on all these different dimensions.

  13. A Multidimensional Approach to Measure Poverty in Rural Bangladesh

    PubMed Central

    Bhuiya, Abbas; Shaila Mahmood, Shehrin; Rana, A.K.M. Masud; Wahed, Tania; Ahmed, Syed Masud; Chowdhury, A. Mushtaque R.

    2007-01-01

    Poverty is increasingly being understood as a multidimensional phenomenon. Other than income-consumption, which has been extensively studied in the past, health, education, shelter, and social involvement are among the most important dimensions of poverty. The present study attempts to develop a simple tool to measure poverty in its multidimensionality where it views poverty as an inadequate fulfillment of basic needs, such as food, clothing, shelter, health, education, and social involvement. The scale score ranges between 72 and 24 and is constructed in such a way that the score increases with increasing level of poverty. Using various techniques, the study evaluates the poverty-measurement tool and provides evidence for its reliability and validity by administering it in various areas of rural Bangladesh. The reliability coefficients, such as test-retest coefficient (0.85) and Cronbach's alpha (0.80) of the tool, were satisfactorily high. Based on the socioeconomic status defined by the participatory rural appraisal (PRA) exercise, the level of poverty identified by the scale was 33% in Chakaria, 26% in Matlab, and 32% in other rural areas of the country. The validity of these results was tested against some traditional methods of identifying the poor, and the association of the scores with that of the traditional indicators, such as ownership of land and occupation, asset index (r=0.72), and the wealth ranking obtained from the PRA exercise, was consistent. A statistically significant inverse relationship of the poverty scores with the socioeconomic status was observed in all cases. The scale also allowed the absolute level of poverty to be measured, and in the present study, the highest percentage of absolute poor was found in terms of health (44.2% in Chakaria, 36.4% in Matlab, and 39.1% in other rural areas), followed by social exclusion (35.7% in Chakaria, 28.5% in Matlab, and 22.3% in other rural areas), clothing (6.2% in Chakaria, 8.3% in Matlab, and 20% in other rural areas), education (14.7% in Chakaria, 8% in Matlab, and 16.8% in other rural areas), food (7.8% in Chakaria, 2.9% in Matlab and 3% in other rural areas), and shelter (0.8% in Chakaria, 1.4% in Matlab, and 3.7% in other rural areas). This instrument will also prove itself invaluable in assessing the individual effects of poverty-alleviation programmes or policies on all these different dimensions. PMID:17985815

  14. Evolution around the Red Sea: Systematics and biogeography of the agamid genus Pseudotrapelus (Squamata: Agamidae) from North Africa and Arabia.

    PubMed

    Tamar, Karin; Scholz, Sebastian; Crochet, Pierre-André; Geniez, Philippe; Meiri, Shai; Schmitz, Andreas; Wilms, Thomas; Carranza, Salvador

    2016-04-01

    Since the Oligocene, regions adjacent to the Red Sea have experienced major environmental changes, from tectonic movements and continuous geological activity to shifting climatic conditions. The effect of these events on the distribution and diversity of the regional biota is still poorly understood. Agamid members of the genus Pseudotrapelus are diurnal, arid-adapted lizards distributed around the Red Sea from north-eastern Africa, across the mountains and rocky plateaus of the Sinai and Arabian Peninsulas northwards to Syria. Despite recent taxonomic work and the interest in the group as a model for studying biogeographic and diversity patterns of the arid areas of North Africa and Arabia, its taxonomy is poorly understood and a comprehensive phylogeny is still lacking. In this study, we analyzed 92 Pseudotrapelus specimens from across the entire distribution range of the genus. We included all known species and subspecies, and sequenced them for mitochondrial (16S, ND4 and tRNAs) and nuclear (MC1R, c-mos) markers. This enabled us to obtain the first time-calibrated molecular phylogeny of the genus, using gene trees, species trees and coalescent-based methods for species delimitation. Our results revealed Pseudotrapelus as a monophyletic genus comprised of two major clades and six independently evolving lineages. These lineages correspond to the five currently recognized species and a sixth lineage relating to the synonymized P. neumanni. The subspecific validity of P. sinaitus werneri needs further assessment as it does not form a distinct cluster relative to P. s. sinaitus. The onset of Pseudotrapelus diversification is estimated to have occurred in Arabia during the late Miocene. Radiation has likely resulted from vicariance and dispersal events due to the continued geological instability, sea level fluctuations and climatic changes within the region. Copyright © 2016 Elsevier Inc. All rights reserved.

  15. A thought on the integration of poverty relief with family planning.

    PubMed

    Yang, K

    1997-01-01

    This article discusses the relationship between population growth and poverty in China, the issue of overpopulation in poor areas, and the need for programs that integrate population control with economic development. The number of Chinese living in poverty declined from about 250 million in 1978 to 80 million in 1993. In March 1994, the government initiated a poverty relief program that aimed to eliminate all poverty by 2001. By 1995, the number of poor declined to 65 million. The causes of poverty are numerous, but include overpopulation. Over the decades, demographic trends in poor areas reveal higher fertility, lower mortality, and higher growth. Poverty appears to be concentrated in 18 provinces and autonomous regions. Poor areas have higher rates of early marriage, early childbirth, and multiple children. Poor areas also have higher rates of disabilities and disease and lower levels of education. Poor areas have double the national percentage of illiterates. Many people living in poor areas are disadvantaged by poor transportation, remote locations, backward production methods, and a lack of a social security system. Scientific knowledge about contraception and quality child care are difficult to diffuse in poor areas. The size of the population denominator directly affects per capita income and per capita grain production. Increases in population put pressure on investment resources for production and development. A larger work force adds to the problem of unemployment. A large population size puts pressure on arable land. Poor areas need a better educated population. Sustainable development requires fertility decline. Integrated family planning programs popularize slogans such as "stabilize grain yield, increase income, and control population growth." Integrated programs have had variable success. Countermeasures must be taken to prevent the association of large families with wealth. Leadership is essential.

  16. GlacierRocks - Glacier-Headwall Interaction and its Influence on Rockfall Activity

    NASA Astrophysics Data System (ADS)

    Hartmeyer, Ingo; Keuschnig, Markus; Krautblatter, Michael; Helfricht, Kay; Leith, Kerry; Otto, Jan-Christoph

    2017-04-01

    Climate models predict continued climate warming and a decrease of Austrian glaciers to less than 20% of their present area by the end of this century. Rockfall from freshly exposed headwalls has been documented as an increasing risk factor with considerable significance for man and high-alpine infrastructure. Recent findings of a five-year terrestrial laserscanning campaign (2011-2016) monitoring glacial headwalls at the Kitzsteinhorn (3.203 m a.s.l.), Hohe Tauern Range, Austria, show the dramatic impact of glacier thinning on adjacent headwalls: 80 % of the detected rockfall volumes were triggered from areas located less than 20 m above the current glacier surface. Despite these implications, little is known about the thermal, mechanical and hydrological processes that operate at the glacier-headwall interface (randkluft). Systemic in-situ monitoring of stability-relevant parameters are lacking, leaving fundamental gaps in the understanding of rockfall preconditioning in glacial headwalls and the geomorphological evolution of glaciated catchments. In this contribution we introduce the recently approved research project 'GlacierRocks', which starts in 2017 and will run for at least three years. 'GlacierRocks' will establish the worldwide first research site for long-term monitoring of stability-relevant processes inside a randkluft system. Based on the acquired monitoring data 'GlacierRocks' is pursuing three overall aims at (1) gaining a better understanding of rockfall preconditioning in randklufts and related geomorphological shaping of headwalls, (2) analyzing poorly understood glacial thinning dynamics near headwalls, and (3) estimating present and future rockfall hazard potential in headwalls on a regional scale. The three system components (headwall, glacier, randkluft) will be investigated by combining geomorphological, glaciological and meteorological methods. 'GlacierRocks' will continuously monitor rock temperature, rock moisture, frost cracking, glacier ice temperature, glacier ice motion, randkluft depth/width changes and a series of meteorological parameters. The study site of 'GlacierRocks' is located in the summit region of the Kitzsteinhorn (3.203 m a.s.l.), which is home to an interdisciplinary Open Air Lab (OPAL) focusing on permafrost and rockfall monitoring. Utilizing the existing infrastructure of the OPAL and collaborating with several Kitzsteinhorn-based partner projects, 'GlacierRocks' will make a concerted effort to shed light on poorly understood processes operating at the transition zone between subglacial and subaerial process domains.

  17. Reduction of rainbow trout spleen size by splenectomy does not alter resistance against bacterial cold water disease

    USDA-ARS?s Scientific Manuscript database

    In lower vertebrates, the contribution of the spleen to anti-bacterial immunity is poorly understood. Researchers have previously reported a phenotypic and genetic correlation between resistance to Flavobacterium psychrophilum, the causative agent of bacterial cold water disease (BCWD) and spleen so...

  18. A sprinkling experiment to quantify celerity-velocity differences at the hillslope scale

    EPA Science Inventory

    The difference between celerity and velocity of hillslope water flow is poorly understood. We assessed these differences by combining a 24-day hillslope sprinkling experiment with a spatially explicit hydrologic model analysis. We focused our work at Watershed 10 at the H.J. And...

  19. Impaired Associative Taste Learning and Abnormal Brain Activation in Kinase-Defective eEF2K Mice

    ERIC Educational Resources Information Center

    Gildish, Iness; Manor, David; David, Orit; Sharma, Vijendra; Williams, David; Agarwala, Usha; Wang, Xuemin; Kenney, Justin W.; Proud, Chris G.; Rosenblum, Kobi

    2012-01-01

    Memory consolidation is defined temporally based on pharmacological interventions such as inhibitors of mRNA translation (molecular consolidation) or post-acquisition deactivation of specific brain regions (systems level consolidation). However, the relationship between molecular and systems consolidation are poorly understood. Molecular…

  20. METABOLISM OF PBDES IN FATHEAD MINNOWS (PIMEPHALES PROMELAS) AND EFFECTS ON THYROID REGULATION

    EPA Science Inventory

    PBDE effects on fish and other wildlife continue to be poorly understood, and this research will contribute to filling this data gap. It will increase our understanding of PBDE metabolic pathways and mechanisms of thyroid dysfunction in fish exposed to this important class of ...

  1. Students' Perspective into the Apathy and Social Disconnectedness They Feel in Undergraduate Business Classrooms

    ERIC Educational Resources Information Center

    Sashittal, Hemant C.; Jassawalla, Avan R.; Markulis, Peter

    2012-01-01

    Apathy and social disconnectedness among undergraduate business students remain poorly understood and under-researched--despite evidence that they produce an adverse impact on learning-related outcomes. Qualitative research was initially conducted among a sample of undergraduate business students to identify the antecedents and learning-related…

  2. Fishing for Features

    ScienceCinema

    Heredia-Langner, Alejandro; Cort, John; Bailey, Vanessa

    2018-01-16

    The Fishing for Features Signature Discovery project developed a framework for discovering signature features in challenging environments involving large and complex data sets or where phenomena may be poorly characterized or understood. Researchers at PNNL have applied the framework to the optimization of biofuels blending and to discover signatures of climate change on microbial soil communities.

  3. INFILTRATION THROUGH DISTURBED URBAN SOILS AND COMPOST-AMENDED SOIL EFFECTS OF RUNOFF QUALITY AND QUANTITY

    EPA Science Inventory

    This project examined a common, but poorly understood, problem associated with land development, namely the modifications made to soil structure and the associated reduced rainfall infiltration and increased runoff. The project was divided into two separate major tasks: 1) to tes...

  4. Engineering Education as a Complex System

    ERIC Educational Resources Information Center

    Gattie, David K.; Kellam, Nadia N.; Schramski, John R.; Walther, Joachim

    2011-01-01

    This paper presents a theoretical basis for cultivating engineering education as a complex system that will prepare students to think critically and make decisions with regard to poorly understood, ill-structured issues. Integral to this theoretical basis is a solution space construct developed and presented as a benchmark for evaluating…

  5. Can Near-Peer Teaching Improve Academic Performance?

    ERIC Educational Resources Information Center

    Williams, Brett; Fowler, James

    2014-01-01

    Near peer teaching is becoming increasingly popular within healthcare education. The experiences and effects of near-peer teaching upon the near-peer teachers' academic performance are poorly understood. In order to address this, the objective of this study was to examine whether a near-peer teaching program improved the overall clinical unit…

  6. Stages and Spatial Scales of Recruitment Limitation in Southern Appalachain Forests

    Treesearch

    James S. Clark; Eric Macklin; Leslie Wood

    1998-01-01

    Recruitment limitation of tree population dynamics is poorly understood, because fecundity and dispersal are difficult to characterize in closed stands. We present an approach that estimates seed production and dispersal under closed canopies and four limitations on recruitment: tree density and location, fecundity, seed dispersal, and establishment. Consistent...

  7. Genetic structure and domestication of carrot (Daucus carota subsp. sativus L.) (Apiaceae)

    USDA-ARS?s Scientific Manuscript database

    Analyses of genetic structure and phylogenetic relationships illuminate the origin and domestication of modern crops. Despite being an important world-wide vegetable, the genetic structure and domestication of carrot (Daucus carota L.) is poorly understood. We provide the first such study using a la...

  8. Emotional climate and feeding styles: observational analysis of dinner in low-income families

    USDA-ARS?s Scientific Manuscript database

    Indulgent feeding styles have been associated with a higher risk for childhood overweight. The processes through which feeding styles impact child weight are poorly understood. The aim of this study was to observe differences in the emotional climate created by parents (affect, tone of voice, gest...

  9. A small cysteine-rich protein from the Asian soybean rust fungus, Phakopsora pachyrhizi, suppresses plant immunity

    USDA-ARS?s Scientific Manuscript database

    The Asian soybean rust fungus, Phakopsora pachyrhizi, is an obligate pathogen capable of causing explosive disease epidemics that drastically reduce the yield of soybean (Glycine max). Currently, the molecular mechanisms by which P. pachyrhizi and other rust fungi cause disease are poorly understood...

  10. Developing Research Relationships toward a Learning Partnership

    ERIC Educational Resources Information Center

    Kaasila, Raimo; Lutovac, Sonja

    2015-01-01

    Research relationships are often poorly understood. Why are some collaborations between research partners more productive than others? This question was a starting point of this paper. By describing their own experiences over a period of three years, the authors evaluated research relationships through collaborative self-study. At the beginning,…

  11. Reciprocal Peer Coaching: A Critical Contributor to Implementing Individual Leadership Plans

    ERIC Educational Resources Information Center

    Goldman, Ellen; Wesner, Marilyn; Karnchanomai, Ornpawee

    2013-01-01

    Billions of dollars are spent annually on programs to develop organizational leaders, yet the effectiveness of these programs is poorly understood. Scholars advise that value is enhanced by the development of individual leadership plans at program completion, followed by implementation experience with subsequent coaching and reflection. The…

  12. BEL1-LIKE HOMEODOMAIN 11 regulated chloroplast development and chlorophyll synthesis in tomato fruit

    USDA-ARS?s Scientific Manuscript database

    Chloroplast development and chlorophyll content and metabolism in unripe tomato contribute to the growth and development of the fruit, and also the ripe fruit quality, but the mechanism is poorly understood. In this work, seven homeobox-containing transcription factors (TFs) with specific ripening-a...

  13. Geographic variation in mycangial communities of Xyleborus glabratus

    USDA-ARS?s Scientific Manuscript database

    Abstract Factors that influence fungal communities in ambrosia beetle mycangia are poorly understood. The beetle that is responsible for spreading laurel wilt in the SE USA, Xyleborus glabratus, was examined at three sites along a 500 km N-S transect in Florida, each populated by host trees in the ...

  14. Effects of Post-Encoding Stress on Performance in the DRM False Memory Paradigm

    ERIC Educational Resources Information Center

    Pardilla-Delgado, Enmanuelle; Alger, Sara E.; Cunningham, Tony J.; Kinealy, Brian; Payne, Jessica D.

    2016-01-01

    Numerous studies have investigated how stress impacts veridical memory, but how stress influences false memory formation remains poorly understood. In order to target memory consolidation specifically, a psychosocial stress (TSST) or control manipulation was administered following encoding of 15 neutral, semantically related word lists (DRM false…

  15. ROOT GROWTH AND TURNOVER IN DIFFERENT AGED PONDEROSA PINE STANDS IN OREGON, USA

    EPA Science Inventory

    The impacts of pollution and climate change on soil carbon dynamics are poorly understood, in part due to a lack of information regarding root production and turnover in natural ecosystems. In order to examine how root dynamics change with stand age in ponderosa pine forests (...

  16. Critical role for CCAAT/Enhancer-binding protein beta in immune complex-induced acute lung injury

    USDA-ARS?s Scientific Manuscript database

    Although inflammation plays a central role in the pathogenesis of acute lung injury (ALI), the molecular mechanisms underlying inflammatory responses in ALI are poorly understood, and therapeutic options remain limited. The CCAAT/enhancer-binding protein (C/EBP) gamma and -gamma have been implicated...

  17. Starvation Promotes Odor/Feeding-Time Associations in Flies

    ERIC Educational Resources Information Center

    Chouhan, Nitin Singh; Wolf, Reinard; Heisenberg, Martin

    2017-01-01

    Starvation causes a motivational state that facilitates diverse behaviors such as feeding, walking, and search. Starved "Drosophila" can form odor/feeding-time associations but the role of starvation in encoding of "time" is poorly understood. Here we show that the extent of starvation is correlated with the fly's ability to…

  18. Cobalt Distribution and Speciation: Effect of Aging, Intermittent Submergence, In situ Rice Roots

    EPA Science Inventory

    The speciation and distribution of cobalt (Co) in soils is poorly understood. This study was conducted using X-ray absorption spectroscopy (XAS) techniques to examine the influence of soluble Co(II) aging, submergence-dried cycling, and the presence of in vivo rice roots on the...

  19. What makes Great Basin sagebrush ecosystems invasible by Bromus tectorum?

    Treesearch

    Jeanne C. Chambers; Bruce A. Roundy; Robert R. Blank; Susan E. Meyer; A. Whittaker

    2007-01-01

    Ecosystem susceptibility to invasion by nonnative species is poorly understood, but evidence is increasing that spatial and temporal variability in resources has large-scale effects. We conducted a study in Artemisia tridentata ecosystems at two Great Basin locations examining differences in resource availability and invasibility of Bromus...

  20. Associations among plasma metabolite levels and short-term exposure to PM2.5 and ozone in a cardiac catheterization cohort.

    EPA Science Inventory

    RATIONALE: Exposure to ambient particulate matter (PM) and ozone has been associated with cardiovascular disease (CVD). However, the mechanisms linking PM and ozone exposure to CVD remain poorly understood .OBJECTIVE: This study explored associations between short-term exposures ...

  1. Accessing and Selecting Word Meaning in Autism Spectrum Disorder

    ERIC Educational Resources Information Center

    Henderson, L. M.; Clarke, P. J.; Snowling, M. J.

    2011-01-01

    Background: Comprehension difficulties are commonly reported in autism spectrum disorder (ASD) but the causes of these difficulties are poorly understood. This study investigates how children with ASD access and select meanings of ambiguous words to test four hypotheses regarding the nature of their comprehension difficulties: semantic deficit,…

  2. Effort versus reward: preparing samples for fungal community characterization in high-throughput sequencing surveys of soils

    USDA-ARS?s Scientific Manuscript database

    Next generation fungal amplicon sequencing is being used with increasing frequency to study fungal diversity in various ecosystems; however, the influence of sample preparation on the characterization of fungal community is poorly understood. We investigated the effects of four procedural modificati...

  3. Size matters: The contribution of mega-infauna to the food webs and ecosystem services of an Oregon estuary - 9-30-12

    EPA Science Inventory

    Large-bodied invertebrates (bivalves, polychaetes, burrowing shrimps) are common to infaunal communities of NE Pacific estuaries, but their contribution to estuarine community structure, function and ecosystem services is poorly understood because they are difficult to sample and...

  4. Coping Mediates the Association between Gender and Depressive Symptomatology in Adolescence

    ERIC Educational Resources Information Center

    Malooly, Ashley M.; Flannery, Kaitlin M.; Ohannessian, Christine McCauley

    2017-01-01

    Previous studies have found evidence for gender and racial/ethnic differences in depressive symptoms in adolescence; however, the mechanisms driving this relationship are poorly understood. The goal of this study was to examine the role of individual differences in dispositional coping in the relationships between gender and depressive…

  5. Cotton defense induction patterns under spatially, temporally and quantitatively varying herbivory levels

    USDA-ARS?s Scientific Manuscript database

    The optimal defense theory (ODT) predicts that plants allocate defense compounds to their tissues depending on its value and the likelihood of herbivore attack. Whereas ODT has been confirmed for static damage levels it remains poorly understood if ODT holds true for defense organization of inducibl...

  6. Drought and leaf herbivory influence floral volatiles and pollinator attraction

    Treesearch

    Laura A. Burkle; Justin B. Runyon

    2016-01-01

    The effects of climate change on species interactions are poorly understood. Investigating the mechanisms by which species interactions may shift under altered environmental conditions will help form a more predictive understanding of such shifts. In particular, components of climate change have the potential to strongly influence floral volatile organic...

  7. CARRY-OVER EFFECTS OF OZONE ON ROOT GROWTH AND CARBOHYDRATE CONCENTRATIONS OF PONDEROSA PINE SEEDLINGS

    EPA Science Inventory

    Ozone exposure decreases belowground carbon allocation and root growth of plants;however,the extent to which these effects persist and the cumulative impact of ozone stress on plant growth are poorly understood.To evaluate the potential for plant compensation,we followed the prog...

  8. Exposure for ultrafine carbon particles at levels below detectable pulmonary inflammation affects cardiovascular performance in spontaneously hypertensive rats*

    EPA Science Inventory

    Rationale: Exposure to particulate matter is a risk factor for cardiopulmonary disease but the related molecular mechanisms are poorly understood. Previously we studied cardiovascular responses in healthy WKY rats following inhalation exposure to ultrafine carbon particles (UfCPs...

  9. Relationship of neuropeptide FF receptors with pubertal maturation of gilts

    USDA-ARS?s Scientific Manuscript database

    Mechanisms governing the timing of puberty in pigs are poorly understood. A genome-wide association study for age at first estrus in pigs identified candidate genes including NPFFR2, which is a putative receptor for RFamide-related peptides (RFRP). RFRP has been shown to negatively regulate secret...

  10. Development of Sensitivity to Audiovisual Temporal Asynchrony during Midchildhood

    ERIC Educational Resources Information Center

    Kaganovich, Natalya

    2016-01-01

    Temporal proximity is one of the key factors determining whether events in different modalities are integrated into a unified percept. Sensitivity to audiovisual temporal asynchrony has been studied in adults in great detail. However, how such sensitivity matures during childhood is poorly understood. We examined perception of audiovisual temporal…

  11. Understanding Authority in Classrooms: A Review of Theory, Ideology, and Research

    ERIC Educational Resources Information Center

    Pace, Judith L.; Hemmings, Annette

    2007-01-01

    Authority is a fundamental, problematic, and poorly understood component of classroom life. A better understanding of classroom authority can be achieved by reviewing writings on social theory, educational ideology, and qualitative research in schools. Social theories provide important analytical tools for examining the constitutive elements of…

  12. Impacts of feral horse use on riparian vegetation within the sagebrush steppe

    USDA-ARS?s Scientific Manuscript database

    Feral horses inhabit rangeland ecosystems around the world, but their impacts on riparian ecosystems are poorly understood. We characterized impacts of a free-ranging horse population on the structure and composition of riparian plant communities in the sagebrush steppe ecosystem in the western US....

  13. PERCHLOROETHYLENE (PERC) INHIBITS FUNCTION OF VOLTAGE-GATED CALCIUM CHANNELS IN PHEOCHROMOCYTOMA CELLS.

    EPA Science Inventory

    The industrial solvent perchloroethylene (PERC) is listed as a hazardous air pollutant in the 1990 Ammendments to Clean Air Act and is a known neurotoxicant. However, the mechanisms by which PERC alters nervous system function are poorly understood. In recent years, it has been d...

  14. RNAi-mediated down-regulation of a melanin polyketide synthase (pks1) gene in the fungus Slafractonia leguminicola

    USDA-ARS?s Scientific Manuscript database

    The fungus Slafractonia leguminicola, the causal agent of blackpatch disease of legumes produces two mycotoxins slaframine and swainsonine, causing slobbers’ symptoms and locoism of grazing animals, respectively. The genetics of this important fungus is poorly understood. This work aimed to develop ...

  15. Fishing for Features

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Heredia-Langner, Alejandro; Cort, John; Bailey, Vanessa

    2016-07-21

    The Fishing for Features Signature Discovery project developed a framework for discovering signature features in challenging environments involving large and complex data sets or where phenomena may be poorly characterized or understood. Researchers at PNNL have applied the framework to the optimization of biofuels blending and to discover signatures of climate change on microbial soil communities.

  16. Teaching the Role of Mitochondrial Transport in Energy Metabolism

    ERIC Educational Resources Information Center

    Passarella, Salvatore; Atlante, Anna

    2007-01-01

    Studies from our laboratories over recent years have uncovered the existence, and established the properties of a variety of mitochondrial transporters. The properties of these transporters throw light on a variety of biochemical phenomena that were previously poorly understood. In particular the role of mitochondrial transport in energy…

  17. Tiered Pricing: Implications for Library Collections

    ERIC Educational Resources Information Center

    Hahn, Karla

    2005-01-01

    In recent years an increasing number of publishers have adopted tiered pricing of journals. The design and implications of tiered-pricing models, however, are poorly understood. Tiered pricing can be modeled using several variables. A survey of current tiered-pricing models documents the range of key variables used. A sensitivity analysis…

  18. Feeding Patterns and Emotional Care in Breastfed Infants

    ERIC Educational Resources Information Center

    Smith, Julie P.; Ellwood, Mark

    2011-01-01

    A number of studies have suggested breastfed infants have improved bonding and attachment or cognitive development outcomes. However, mechanisms by which these differences might develop are poorly understood. We used maternal time use data to examine whether exclusively breastfeeding mothers spend more time in close interactive behaviors with…

  19. AGING AND LIFE-STAGE SUSCEPTIBILITY: TOLUENE EFFECTS ON BRAIN OXIDATIVE STRESS PARAMETERS IN BROWN NORWAY RATS.

    EPA Science Inventory

    The influence of aging on susceptibility to environmental contaminants is poorly understood. The objectives of this study were to test whether oxidative stress (OS) is a potential toxicity pathway following toluene exposure and to determine if these effects are age-dependent. We ...

  20. Altered belowground carbon cycling following land use change to perennial bioenergy crops

    USDA-ARS?s Scientific Manuscript database

    Belowground carbon (C) dynamics of terrestrial ecosystems play an important role in the global C cycle and thereby in climate regulation, yet remain poorly understood. Globally, land use change is a major driver of changes in belowground C storage; in general, land clearing and tillage for agricult...

  1. Measuring and Inducing Brain Plasticity in Chronic Aphasia

    ERIC Educational Resources Information Center

    Fridriksson, Julius

    2011-01-01

    Brain plasticity associated with anomia recovery in aphasia is poorly understood. Here, I review four recent studies from my lab that focused on brain modulation associated with long-term anomia outcome, its behavioral treatment, and the use of transcranial brain stimulation to enhance anomia treatment success in individuals with chronic aphasia…

  2. Adaptation of neuronal signaling and cell stress response pathways in a multigenic response of Drosophila melanogaster to DDT selection

    USDA-ARS?s Scientific Manuscript database

    The adaptation of insect populations to insecticidal control is a continual threat human health and sustainable agriculture practices, but many complex genomic mechanisms involved remain poorly understood. A systems approach was applied to investigate the interconnections between structural and func...

  3. Life cycle expression analysis of three cell wall degradation-related genes in ethylene-treated grass

    USDA-ARS?s Scientific Manuscript database

    Ethylene regulates multiple developmental processes during a plant life cycle, but the effect of ethylene on the upregulation of senescence-, stress-, and post-harvest-related genes in forage grasses is poorly understood. In this work, we used quantitative PCR to determine whether ethylene applicat...

  4. Deficit irrigation practices may alter Vitis vinifera L. resistance to cold injury: Empirical evidence from the field

    USDA-ARS?s Scientific Manuscript database

    Deficit irrigation reduces seasonal carbohydrate supply and decreases starch concentrations in vegetative tissues. The specific role of starch metabolism in conferring tolerance to cold is still poorly understood. A decrease in cold tolerance after sequential years of deficit irrigation would limit ...

  5. Prevalence of obesity: A public health problem poorly understood

    USDA-ARS?s Scientific Manuscript database

    This review article discusses the Dietary Guidelines for Americans in support of a total diet approach to achieving diet and health goals, especially as they relate to the obesity epidemic. However, some scientists and organizations have identified one food, food group, or nutrient as the cause of t...

  6. Secondary organic aerosol formation from fossil fuel sources contribute majority of summertime organic mass at Bakersfield

    EPA Science Inventory

    Secondary organic aerosols (SOA), known to form in the atmosphere from oxidation of volatile organic compounds (VOCs) emitted by anthropogenic and biogenic sources, are a poorly understood but substantial component of atmospheric particles. In this study, we examined the chemic...

  7. Structuring Program Analysis for Educational Research.

    ERIC Educational Resources Information Center

    Levine, Donald M.

    Education is too complex, multidimensional, and poorly understood to lend itself to a single cost/effectiveness criterion. Rather, analysts in the educational field seek to rank alternatives by their effectiveness, report separately on the cost implications, and leave the tradeoffs to the decisionmaker's judgment. In this context, a program is any…

  8. Inhibition in Dot Comparison Tasks

    ERIC Educational Resources Information Center

    Clayton, Sarah; Gilmore, Camilla

    2015-01-01

    Dot comparison tasks are commonly used to index an individual's Approximate Number System (ANS) acuity, but the cognitive processes involved in completing these tasks are poorly understood. Here, we investigated how factors including numerosity ratio, set size and visual cues influence task performance. Forty-four children aged 7-9 years completed…

  9. Social Attribution Processes and Comorbid Psychiatric Symptoms in Children with Asperger Syndrome

    ERIC Educational Resources Information Center

    Meyer, Jessica A.; Mundy, Peter C.; Van Hecke, Amy Vaughan; Durocher, Jennifer Stella

    2006-01-01

    The factors that place children with Asperger syndrome at risk for comorbid psychiatric symptoms, such as anxiety and depression, remain poorly understood. We investigated the possibility that the children's emotional and behavioral difficulties are associated with social information and attribution processing. Participants were children with…

  10. What Is Lexical Proficiency? Some Answers from Computational Models of Speech Data

    ERIC Educational Resources Information Center

    Crossley, Scott A.; Salsbury, Tom; McNamara, Danielle S.; Jarvis, Scott

    2011-01-01

    Lexical proficiency, as a cognitive construct, is poorly understood. However, lexical proficiency is an important element of language proficiency and fluency, especially for second language (L2) learners. Lexical proficiency is also an important attribute of L2 academic achievement. Generally speaking, lexical proficiency comprises breadth of…

  11. Exposure to pairs of Aeromonas strains enhances virulence in the Caenorhabditis elegans infection model

    USDA-ARS?s Scientific Manuscript database

    Aeromonad virulence remains poorly understood, and is difficult to predict from strain characteristics. In addition, infections are often polymicrobial (i.e., are mixed infections), and 5 -10% of such infections include two distinct aeromonads, which has an unknown impact on virulence. In this work,...

  12. Rehabilitation Counseling Professional Associations: Membership, Membership Intentions, and Levels of Commitment among Rehabilitation Counseling Professionals

    ERIC Educational Resources Information Center

    Phillips, Brian N.

    2011-01-01

    Declining membership is a concerning, yet poorly understood issue affecting professional associations across many disciplines (Bauman, 2008). The discipline of rehabilitation counseling is experiencing membership decline even as the number of certified rehabilitation counselors continues to increase (Leahy, 2009). Little empirical research…

  13. Contributions of hydrology to Vesicular Stomatitis Virus emergence in the Western United States

    USDA-ARS?s Scientific Manuscript database

    Relationships between environmental variables associated with the spread of vector-borne pathogens, such as RNA viruses transmitted to humans and animals, remain poorly understood. Vesicular stomatitis (VS) is caused by a vector-borne, zoonotic RNA virus (VSV), and is the most common vesicular dise...

  14. Statistical Word Learning in Children with Autism Spectrum Disorder and Specific Language Impairment

    ERIC Educational Resources Information Center

    Haebig, Eileen; Saffran, Jenny R.; Ellis Weismer, Susan

    2017-01-01

    Background: Word learning is an important component of language development that influences child outcomes across multiple domains. Despite the importance of word knowledge, word-learning mechanisms are poorly understood in children with specific language impairment (SLI) and children with autism spectrum disorder (ASD). This study examined…

  15. The role of CAX1 and CAX3 in elemental distribution and abundance in Arabidopsis seed

    USDA-ARS?s Scientific Manuscript database

    The ability to alter nutrient partitioning within plant cells is poorly understood. In Arabidopsis (Arabidopsis thaliana), a family of endomembrane cation exchangers (CAXs) transports Ca(2+) and other cations. However, experiments have not focused on how the distribution and partitioning of calcium ...

  16. An Investigation of Factors Involved When Educational Psychologists sSupervise Other Professionals

    ERIC Educational Resources Information Center

    Callicott, Katie; Leadbetter, Jane

    2013-01-01

    Inter-professional supervision combines the social processes of supervision and multi-agency working: both complex and often poorly understood processes. This paper discusses the first author's research of inter-professional supervision, involving an educational psychologist (EP) supervising another professional and complements the recently…

  17. Madrone duff and the natural regeneration of Douglas-fir.

    Treesearch

    Don Minore

    1987-01-01

    Excellent natural regeneration of Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco) often occurs under canopies of Pacific madrone (Arbutus menziesii Pursh), but the effects of madrone duff on regeneration are poorly understood. A field experiment was conducted in a thinned Douglas-fir stand in southwestern Oregon to see if...

  18. Storage conditions affecting increase in falling number of soft red winter wheat grain

    USDA-ARS?s Scientific Manuscript database

    Falling number (FN) of wheat grain, a measure of preharvest sprouting, tends to increase during storage; however, grain and storage conditions that impact FN changes are poorly understood. Wheat grain samples of varying FN from several cultivars were obtained by malting, by incubating wheat stalks,...

  19. Can Human Associated Bacteroides (HF183MGB) be used as a Pathogen Predictor in Urban Watersheds?

    EPA Science Inventory

    The fate and transport dynamics of fecal indicators and pathogenic microorganisms are poorly characterized in urban watersheds. Moreover, very little is understood about the actual relationship between fecal indicator bacteria (FIB) and the risk to public health. In this study we...

  20. Vegetative biomass predicts inflorescence production along a CO2 concentration gradient in mesic grassland

    USDA-ARS?s Scientific Manuscript database

    Atmospheric CO2 concentration will likely exceed 500 uL L-1 by 2050, often increasing plant community productivity in part by increasing abundance of species favored by increased CA. Whether increased abundance translates to increased inflorescence production is poorly understood, and is important ...

  1. Homing success in wintering sparrows

    Treesearch

    C. John Ralph; L. Richard Mewaldt

    1976-01-01

    The ability of birds to return "home" after displacement is generallywell known but poorly understood because of the multiplicity of variablesthat affect homing performance. These variables can include age andprevious experience of the bird, as well as the timing and distance of thedisplacement. The phenomenon of homing is also difficult to interpretbecause,...

  2. TOXICITY PATHWAY ANALYSIS IN AGING BROWN NORWAY RAT BRAIN FOLLOWING ACUTE TOLUENE EXPOSURE

    EPA Science Inventory

    The influence of aging on susceptibility to environmental stressors is poorly understood. To investigate the contribution of different life stages on response to toxicants, we examined the effects of acute exposure by oral gavage of the volatile organic solvent toluene (0.00, 0.3...

  3. Short-term Effects of Air Temperature on Blood Markers of Coagulation and Inflammation in Potentially Susceptible Individuals

    EPA Science Inventory

    Objectives: Changes in air temperature are associated with an increase in cardiovascular events, but the role of pro-coagulant and pro-inflammatory blood markers is still poorly understood. We investigated the association between air temperature and fibrinogen, plasminogen act...

  4. Cardiomyopathy confers susceptibility to particulate matter-induced oxidative stress, vagal dominance, arrhythmia, pulmonary inflammation in heart failure-prone rats

    EPA Science Inventory

    Acute exposure to ambient fine particulate matter (PM2.5) is tied to cardiovascular morbidity and mortality, especially among those with prior cardiac injury. The mechanisms and pathophysiologic events precipitating these outcomes remain poorly understood but may involve inflamm...

  5. Dysarthria and Friedreich's Ataxia: What Can Intelligibility Assessment Tell Us?

    ERIC Educational Resources Information Center

    Blaney, Bronagh; Hewlett, Nigel

    2007-01-01

    Background: Friedreich's ataxia is one of the most common hereditary disorders of the nervous system. Dysarthria is a pervasive symptom of Friedreich's ataxia, yet the clinical presentation of speech symptoms remains poorly understood, leaving clinicians without the evidence required to develop therapy interventions. Aims: The research reported…

  6. Face Scanning Distinguishes Social from Communication Impairments in Autism

    ERIC Educational Resources Information Center

    Falck-Ytter, Terje; Fernell, Elisabeth; Gillberg, Christopher; Von Hofsten, Claes

    2010-01-01

    How closely related are the social and communicative impairments in Autism Spectrum Disorder (ASD)? Recent findings in typically developing children suggest that both types of impairment are highly heritable but have only moderate behavioural and genetic overlap. So far, their respective roles in social perception are poorly understood. Here we…

  7. Regulating Approaches to Learning: Testing Learning Strategy Convergences across a Year at University

    ERIC Educational Resources Information Center

    Fryer, Luke K.; Vermunt, Jan D.

    2018-01-01

    Background: Contemporary models of student learning within higher education are often inclusive of processing and regulation strategies. Considerable research has examined their use over time and their (person-centred) convergence. The longitudinal stability/variability of learning strategy use, however, is poorly understood, but essential to…

  8. Spatial vegetation patterns and neighborhood competition among woody plants in an East African savanna

    USDA-ARS?s Scientific Manuscript database

    The majority of research on savanna vegetation dynamics has focused on the coexistence of woody and herbaceous vegetation; interactions among woody plants in savannas are relatively poorly understood. We present data from a 10-year longitudinal study of spatially explicit growth patterns of woody ve...

  9. Variable high pressure processing sensitivities for GII human noroviruses

    USDA-ARS?s Scientific Manuscript database

    Human norovirus (HuNoV) is the leading cause of foodborne diseases worldwide. High pressure processing (HPP) is one of the most promising non-thermal technologies for decontamination of viral pathogens in foods. However, the survival of HuNoVs by HPP is poorly understood because these viruses cann...

  10. High pressure treatment of human norovirus-like particles: factors affecting destruction efficacy

    USDA-ARS?s Scientific Manuscript database

    Human norovirus (HuNoV) is the leading cause of foodborne diseases worldwide. High pressure processing (HPP) is considered a promising non-thermal technology to inactivate viral pathogens in foods. However, the effectiveness of HPP on inactivating HuNoV remains poorly understood because it cannot be...

  11. The Reciprocity of "Imitative Learning" through Apprenticeship

    ERIC Educational Resources Information Center

    Chan, Selena

    2017-01-01

    Humans are proposed to have evolved to learn through observation, imitation and practice or mimesis. In this article, the contribution of imitation, as an important but poorly understood aspect of mimetic learning, is advocated to create affordances for dyadic learning. However, learning through imitation is often perceived with negative…

  12. The Therapy Process Observational Coding System for Child Psychotherapy Strategies Scale

    ERIC Educational Resources Information Center

    McLeod, Bryce D.; Weisz, John R.

    2010-01-01

    Most everyday child and adolescent psychotherapy does not follow manuals that document the procedures. Consequently, usual clinical care has remained poorly understood and rarely studied. The Therapy Process Observational Coding System for Child Psychotherapy-Strategies scale (TPOCS-S) is an observational measure of youth psychotherapy procedures…

  13. High School Dropout in Proximal Context: The Triggering Role of Stressful Life Events

    ERIC Educational Resources Information Center

    Dupéré, Véronique; Dion, Eric; Leventhal, Tama; Archambault, Isabelle; Crosnoe, Robert; Janosz, Michel

    2018-01-01

    Adolescents who drop out of high school experience enduring negative consequences across many domains. Yet, the circumstances triggering their departure are poorly understood. This study examined the precipitating role of recent psychosocial stressors by comparing three groups of Canadian high school students (52% boys; M[subscript…

  14. Discrimination and Sleep: The Protective Role of School Belonging

    ERIC Educational Resources Information Center

    Huynh, Virginia W.; Gillen-O'Neel, Cari

    2016-01-01

    Ethnic minority adolescents experience certain sleep problems, yet factors that affect their sleep are poorly understood. This study examined the association between ethnic discrimination and sleep during adolescence and the extent to which perceived stress mediated these associations. This study also examined whether school belonging can protect…

  15. Global diversity and geography of soil fungi

    Treesearch

    Leho Tedersoo; Mohammad Bahram; Sergei Põlme; Urmas Kõljalg; Nourou S. Yorou; Ravi Wijesundera; Luis Villarreal Ruiz; Aida M. Vasco-Palacios; Pham Quang Thu; Ave Suija; Matthew E. Smith; Cathy Sharp; Erki Saluveer; Alessandro Saitta; Miguel Rosas; Taavi Riit; David Ratkowsky; Karin Pritsch; Kadri Põldmaa; Meike Piepenbring; Cherdchai Phosri; Marko Peterson; Kaarin Parts; Kadri Pärtel; Eveli Otsing; Eduardo Nouhra; André L. Njouonkou; R. Henrik Nilsson; Luis N. Morgado; Jordan Mayor; Tom W. May; Luiza Majukim; D. Jean Lodge; Su See Lee; Karl-Henrik Larsson; Petr Kohout; Kentaro Hosaka; Indrek Hiiesalu; Terry W. Henkel; Helery Harend; Liang-dong Guo; Alina Greslebin; Gwen Gretlet; Jozsef Geml; Genevieve Gates; William Dunstan; Chris Dunk; Rein Drenkhan; John Dearnaley; André De Kesel; Tan Dang; Xin Chen; Franz Buegger; Francis Q. Brearley; Gregory Bonito; Sten Anslan; Sandra Abell; Kessy Abarenkov

    2014-01-01

    Fungi play major roles in ecosystem processes, but the determinants of fungal diversity and biogeographic patterns remain poorly understood. Using DNA metabarcoding data from hundreds of globally distributed soil samples,we demonstrate that fungal richness is decoupled from plant diversity.The plant-to-fungus richness ratio declines exponentially toward the poles....

  16. Climate variability drives population cycling and synchrony

    Treesearch

    Lars Y. Pomara; Benjamin Zuckerberg

    2017-01-01

    Aim There is mounting concern that climate change will lead to the collapse of cyclic population dynamics, yet the influence of climate variability on population cycling remains poorly understood. We hypothesized that variability in survival and fecundity, driven by climate variability at different points in the life cycle, scales up from...

  17. Mosquito host choices on livestock amplifiers of Rift Valley fever virus in Kenya

    USDA-ARS?s Scientific Manuscript database

    Animal hosts may vary in their attraction and acceptability as components of the host location process for assessing biting rates of vectors and risk of exposure to pathogens. However, these parameters remain poorly understood for mosquito vectors of the Rift Valley fever (RVF), an arboviral disease...

  18. Dissecting genome-wide association signals for loss-of-function phenotypes in sorghum flavonoid pigmentation traits

    USDA-ARS?s Scientific Manuscript database

    Genome-wide association studies (GWAS) are a powerful method to dissect the genetic basis of traits, though in practice the effects of complex genetic architecture and population structure remain poorly understood. To compare mapping strategies we dissect the genetic control of flavonoid pigmentatio...

  19. Is body size important? Seasonal changes in morphology in two grass-feeding Abacarus mites

    USDA-ARS?s Scientific Manuscript database

    Overwintering strategies in herbivorous mites (Acari: Eriophyoidea) are poorly understood. A study of two Abacarus spp., was conducted to compare body size parameters of adult females in different seasons. Mites of Abacarus n. sp. (under description) and A. lolli were sampled from Bromopsis inermis ...

  20. Single Particulate SEM-EDX Analysis of Iron-Containing Coarse Particulate Matter in an Urban Environment: Sources and Distribution of Iron within Cleveland, Ohio

    EPA Science Inventory

    The physicochemical properties of coarse-mode, iron-containing particles, and their temporal and spatial distributions are poorly understood. Single particle analysis combining x-ray elemental mapping and computer-controlled scanning electron microscopy (CCSEM-EDX) of passively ...

  1. Modeling Spatial and Temporal Aspects of Visual Backward Masking

    ERIC Educational Resources Information Center

    Hermens, Frouke; Luksys, Gediminas; Gerstner, Wulfram; Herzog, Michael H.; Ernst, Udo

    2008-01-01

    Visual backward masking is a versatile tool for understanding principles and limitations of visual information processing in the human brain. However, the mechanisms underlying masking are still poorly understood. In the current contribution, the authors show that a structurally simple mathematical model can explain many spatial and temporal…

  2. Tackling the Difficulties in Learning Evolution: Effects of Adaptive Self-Explanation Prompts

    ERIC Educational Resources Information Center

    Neubrand, Charlotte; Harms, Ute

    2017-01-01

    Teaching and learning evolution is challenging. Biology education research shows that the underlying evolutionary concepts are poorly understood among students. This prevents a meaningful understanding of the central biological concepts. The instructional format of self-explanation prompts seems to be promising to respond to these difficulties.…

  3. Environmental enteric dysfunction and growth failure/stunting in global child health

    USDA-ARS?s Scientific Manuscript database

    Approximately 25% of the world's children aged <5 years have stunted growth, which is associated with increased mortality, cognitive dysfunction, and loss of productivity. Reducing by 40% the number of stunted children is a global target for 2030. The pathogenesis of stunting is poorly understood. P...

  4. Comparative analysis of gut microbiota of Culex restuans (Diptera: Culicidae) females from different parents

    USDA-ARS?s Scientific Manuscript database

    The potential for gut microbiota to impede or enhance pathogen transmission is well-documented but the factors that shape this microbiota in mosquito vectors are poorly understood. We characterized and compared the gut microbiota of adult females of Culex restuans Theobald from different parents. Cu...

  5. The Role of the Basolateral Amygdala in Punishment

    ERIC Educational Resources Information Center

    Dit-Bressel, Philip Jean-Richard; McNally, Gavan P.

    2015-01-01

    Aversive stimuli not only support fear conditioning to their environmental antecedents, they also punish behaviors that cause their occurrence. The amygdala, especially the basolateral nucleus (BLA), has been critically implicated in Pavlovian fear learning but its role in punishment remains poorly understood. Here, we used a within-subjects…

  6. Depression and Relational Health in Asian American and European American College Women

    ERIC Educational Resources Information Center

    Lund, Terese J.; Chan, Pauline; Liang, Belle

    2014-01-01

    Research consistently demonstrates elevated rates of depression among college-aged women, yet evidence of racial differences in depression among this population are poorly understood. Moreover, the correlates of depression among Asian American women are also understudied. In this exploratory analysis, we examined mean differences in depression…

  7. Flexibility and extracellular opening determine the interaction between ligands and insect sulfakinin receptors

    USDA-ARS?s Scientific Manuscript database

    Despite their fundamental importance for growth, the mechanisms that regulate food intake are poorly understood. Our previous work demonstrated that insect sulfakinin (SK) signaling is involved in inhibiting feeding in an important model and pest insect, the red flour beetle Tribolium castaneum. B...

  8. Soy protein isolate inhibits hepatic tumor promotion in mice fed a high-fat liquid diet

    USDA-ARS?s Scientific Manuscript database

    Alcoholic and nonalcoholic fatty liver disease are risk factors for development of hepatocellular carcinoma, but the underlying mechanisms are poorly understood. On the other hand, ingestion of soy-containing diets may oppose the development of certain cancers. We previously reported that replacing ...

  9. Acute and Subchronic Toxicity of Inhaled Toluene in Male Long-Evans Rats: Oxidative Stress Markers in Brain

    EPA Science Inventory

    The effects of exposure to volatile organic compounds (VOCs), which are of concern to the EPA, are poorly understood, in part because of insufficient characterization of how human exposure duration impacts VOC effects. Two inhalation studies with multiple endpoints, one acute an...

  10. The Importance of Allochthonous Subsidies to an Estuarine Food Web along a Salinity Gradient

    EPA Science Inventory

    Estuarine food webs function within a heterogeneous mosaic and are supported by a mix of primary producers from both local and distant sources. Processes governing the exchange and consumption of organic matter (OM), however, are poorly understood. To study the contribution of ...

  11. Metabolic coevolution in the bacterial symbiosis of whiteflies and related plant sap-feeding insects

    USDA-ARS?s Scientific Manuscript database

    In animals dependent on intracellular bacteria with very small genomes, the host cell is adapted to support the function of its bacterial symbionts, but the molecular basis of these adaptations is poorly understood. We investigated the metabolic coevolution between the whitefly Bemisia tabaci and th...

  12. How Do Teachers View Their Own Pedagogical Authority?

    ERIC Educational Resources Information Center

    Harjunen, Elina

    2009-01-01

    Authority, a fundamental part of the teaching-studying-learning process, is a problematic and poorly understood component of classroom life. It can be said, in practical terms, that pedagogical authority is constructed in classrooms, in teacher-student interaction and in the spirit of their physical presence, confidence, appreciation,…

  13. Changes in Markers of Genotoxicity in Relation to Exposure to Disinfection By-Products in Swimming Pools

    EPA Science Inventory

    Exposure to disinfection by-products (DBPs) has been associated with cancer risk, but the mechanisms of action are poorly understood. A recent study found increased bladder cancer risk among subjects attending swimming pools, where uptake of DBPs, such as trihalomethanes (THMs) c...

  14. Understanding the carotenoid biosynthetic pathway through observation of four color variants of developing watermelon (Citrullus lanatus (Thunb.) Matsum. & Nanai)

    USDA-ARS?s Scientific Manuscript database

    The carotenoid biosynthetic pathway regulatory mechanisms leading to lycopene accumulation are well defined in the model fruit, tomato (Lycopersicon esculentum L.). The regulatory mechanisms leading to accumulation of other carotenoids and flesh colors, however, are poorly understood. The variety ...

  15. A COMPUTER-CONTROLLED SYSTEM FOR GENERATING UNIFORM SURFACE DEPOSITS TO STUDY THE TRANSPORT OF PARTICULATE MATTER

    EPA Science Inventory

    Improved methods for measuring and assessing microenvironmental exposure in individuals are needed. How human activities affect particulate matter in the personal cloud is poorly understood. A quality assurance tool to aid the study of particle transport mechanisms (e.g., re-en...

  16. Luminal Starch Substrate "Brake" on Maltase-Glucoamylase Activity Is Located within the Glucoamylase Subunit

    USDA-ARS?s Scientific Manuscript database

    The detailed mechanistic aspects for the final starch digestion process leading to effective alpha-glucogenesis by the 2 mucosal alpha-glucosidases, human sucrase-isomaltase complex (SI) and human maltase-glucoamylase (MGAM), are poorly understood. This is due to the structural complexity and vast v...

  17. Evidence of a sewer vapor transport pathway at the USEPA vapor intrusion research duplex

    EPA Science Inventory

    The role of sewer lines as preferential pathways for vapor intrusion is poorly understood. Although the importance of sewer lines for volatile organic compound (VOC) transport has been documented at a small number of sites with vapor intrusion, sewer lines are not routinely sampl...

  18. Variations in Cognitive Maps: Understanding Individual Differences in Navigation

    ERIC Educational Resources Information Center

    Weisberg, Steven M.; Schinazi, Victor R.; Newcombe, Nora S.; Shipley, Thomas F.; Epstein, Russell A.

    2014-01-01

    There are marked individual differences in the formation of cognitive maps both in the real world and in virtual environments (VE; e.g., Blajenkova, Motes, & Kozhevnikov, 2005; Chai & Jacobs, 2010; Ishikawa & Montello, 2006; Wen, Ishikawa, & Sato, 2011). These differences, however, are poorly understood and can be difficult to…

  19. Synergism between inositol polyphosphates and TOR kinase signaling in nutrient sensing, growth control, and lipid metabolism in Chlamydomonas

    USDA-ARS?s Scientific Manuscript database

    The networks that govern carbon metabolism and control intracellular carbon partitioning in photosynthetic cells are poorly understood. Target of rapamycin (TOR) kinase is a conserved growth regulator that integrates nutrient signals and modulates cell growth in eukaryotes, though the TOR signaling ...

  20. Altered White Matter Microstructure in Adolescents with Major Depression: A Preliminary Study

    ERIC Educational Resources Information Center

    Cullen, Kathryn R.; Klimes-Dougan, Bonnie; Muetzel, Ryan; Mueller, Bryon A.; Camchong, Jazmin; Houri, Alaa; Kurma, Sanjiv; Lim, Kelvin O.

    2010-01-01

    Objective: Major depressive disorder (MDD) occurs frequently in adolescents, but the neurobiology of depression in youth is poorly understood. Structural neuroimaging studies in both adult and pediatric populations have implicated frontolimbic neural networks in the pathophysiology of MDD. Diffusion tensor imaging (DTI), which measures white…

  1. EFFECTS OF TOLUENE ON BRAIN OXIDATIVE STRESS PARAMETERS IN AGING BROWN NORWAY RATS

    EPA Science Inventory

    Aging-related susceptibility to environmental chemicals is poorly understood. Oxidative stress (OS) appears to play an important role in susceptibility and disease in old age. The objectives of this study, therefore, were to test whether OS is a potential toxicity pathway for tol...

  2. Sleep Disturbances among Medical Students: A Global Perspective

    PubMed Central

    Azad, Muhammad Chanchal; Fraser, Kristin; Rumana, Nahid; Abdullah, Ahmad Faris; Shahana, Nahid; Hanly, Patrick J.; Turin, Tanvir Chowdhury

    2015-01-01

    Medical students carry a large academic load which could potentially contribute to poor sleep quality above and beyond that already experienced by modern society. In this global literature review of the medical students' sleep experience, we find that poor sleep is not only common among medical students, but its prevalence is also higher than in non-medical students and the general population. Several factors including medical students' attitudes, knowledge of sleep, and academic demands have been identified as causative factors, but other potential mechanisms are incompletely understood. A better understanding about the etiology of sleep problems in medical trainees is essential if we hope to improve the overall quality of medical students' lives, including their academic performance. Sleep self-awareness and general knowledge appear insufficient in many studied cohorts, so increasing education for students might be one beneficial intervention. We conclude that there is ample evidence for a high prevalence of the problem, and research in this area should now expand towards initiatives to improve general sleep education for medical students, identify students at risk, and target them with programs to improve sleep. Citation: Azad MC, Fraser K, Rumana N, Abdullah AF, Shahana N, Hanly PJ, Turin TC. Sleep disturbances among medical students: a global perspective. J Clin Sleep Med 2015;11(1):69–74. PMID:25515274

  3. An Ethnographic Study of the Social Context of Migrant Health in the United States

    PubMed Central

    Holmes, Seth M

    2006-01-01

    Background Migrant workers in the United States have extremely poor health. This paper aims to identify ways in which the social context of migrant farm workers affects their health and health care. Methods and Findings This qualitative study employs participant observation and interviews on farms and in clinics throughout 15 months of migration with a group of indigenous Triqui Mexicans in the western US and Mexico. Study participants include more than 130 farm workers and 30 clinicians. Data are analyzed utilizing grounded theory, accompanied by theories of structural violence, symbolic violence, and the clinical gaze. The study reveals that farm working and housing conditions are organized according to ethnicity and citizenship. This hierarchy determines health disparities, with undocumented indigenous Mexicans having the worst health. Yet, each group is understood to deserve its place in the hierarchy, migrant farm workers often being blamed for their own sicknesses. Conclusions Structural racism and anti-immigrant practices determine the poor working conditions, living conditions, and health of migrant workers. Subtle racism serves to reduce awareness of this social context for all involved, including clinicians. The paper concludes with strategies toward improving migrant health in four areas: health disparities research, clinical interactions with migrant laborers, medical education, and policy making. PMID:17076567

  4. Crystal structure control of aluminized clay minerals on the mobility of caesium in contaminated soil environments

    NASA Astrophysics Data System (ADS)

    Dzene, Liva; Ferrage, Eric; Viennet, Jean-Christophe; Tertre, Emmanuel; Hubert, Fabien

    2017-02-01

    Radioactive caesium pollution resulting from Fukushima Dai-ichi and Chernobyl nuclear plant accidents involves strong interactions between Cs+ and clays, especially vermiculite-type minerals. In acidic soil environments, such as in Fukushima area, vermiculite is subjected to weathering processes, resulting in aluminization. The crystal structure of aluminized clays and its implications for Cs+ mobility in soils remain poorly understood due to the mixture of these minerals with other clays and organic matter. We performed acidic weathering of a vermiculite to mimic the aluminization process in soils. Combination of structure analysis and Cs+ extractability measurements show that the increase of aluminization is accompanied by an increase in Cs+ mobility. Crystal structure model for aluminized vermiculite is based on the interstratification of unaltered vermiculite layers and aluminized layers within the same particle. Cs+ in vermiculite layers is poorly mobile, while the extractability of Cs+ is greatly enhanced in aluminized layers. The overall reactivity of the weathered clay (cation exchange capacity, Cs+ mobility) is then governed by the relative abundance of the two types of layers. The proposed layer model for aluminized vermiculite with two coexisting populations of caesium is of prime importance for predicting the fate of caesium in contaminated soil environments.

  5. Sleep-wake disturbances in sporadic Creutzfeldt-Jakob disease.

    PubMed

    Landolt, H-P; Glatzel, M; Blättler, T; Achermann, P; Roth, C; Mathis, J; Weis, J; Tobler, I; Aguzzi, A; Bassetti, C L

    2006-05-09

    The prevalence and characteristics of sleep-wake disturbances in sporadic Creutzfeldt-Jakob disease (sCJD) are poorly understood. Seven consecutive patients with definite sCJD underwent a systematic assessment of sleep-wake disturbances, including clinical history, video-polysomnography, and actigraphy. Extent and distribution of neurodegeneration was estimated by brain autopsy in six patients. Western blot analyses enabling classification and quantification of the protease-resistant isoform of the prion protein, PrPSc, in thalamus and occipital cortex was available in four patients. Sleep-wake symptoms were observed in all patients, and were prominent in four of them. All patients had severe sleep EEG abnormalities with loss of sleep spindles, very low sleep efficiency, and virtual absence of REM sleep. The correlation between different methods to assess sleep-wake functions (history, polysomnography, actigraphy, videography) was generally poor. Brain autopsy revealed prominent changes in cortical areas, but only mild changes in the thalamus. No mutation of the PRNP gene was found. This study demonstrates in sporadic Creutzfeldt-Jakob disease, first, the existence of sleep-wake disturbances similar to those reported in fatal familial insomnia in the absence of prominent and isolated thalamic neuronal loss, and second, the need of a multimodal approach for the unambiguous assessment of sleep-wake functions in these patients.

  6. Astrobiology: A pathway to adult science literacy?

    NASA Astrophysics Data System (ADS)

    Oliver, C. A.; Fergusson, J.

    2007-10-01

    Adult science illiteracy is widespread. This is concerning for astrobiology, or indeed any other area of science in the communication of science to public audiences. Where and how does this scientific illiteracy arise in the journey to adulthood? Two astrobiology education projects have hinted that science illiteracy may begin in high school. This relationship between high school science education and the public understanding of science is poorly understood. Do adults forget their science education, or did they never grasp it in the first place? A 2003 science education project raised these questions when 24 16-year-olds from 10 Sydney high schools were brought into contact with real science. The unexpected results suggested that even good high school science students have a poor understanding of how science is really undertaken in the field and in the laboratory. This concept is being further tested in a new high school science education project, aimed at the same age group, using authentic astrobiology cutting-edge data, NASA Learning Technologies tools, a purpose-built research Information and Communication Technology-aided learning facility and a collaboration that spans three continents. In addition, a first year university class will be tested for evidence of science illiteracy immediately after high school among non-science oriented but well-educated students.

  7. Functional anatomy and feeding biomechanics of a giant Upper Jurassic pliosaur (Reptilia: Sauropterygia) from Weymouth Bay, Dorset, UK.

    PubMed

    Foffa, Davide; Cuff, Andrew R; Sassoon, Judyth; Rayfield, Emily J; Mavrogordato, Mark N; Benton, Michael J

    2014-08-01

    Pliosaurs were among the largest predators in Mesozoic seas, and yet their functional anatomy and feeding biomechanics are poorly understood. A new, well-preserved pliosaur from the Kimmeridgian of Weymouth Bay (UK) revealed cranial adaptations related to feeding. Digital modelling of computed tomography scans allowed reconstruction of missing, distorted regions of the skull and of the adductor musculature, which indicated high bite forces. Size-corrected beam theory modelling showed that the snout was poorly optimised against bending and torsional stresses compared with other aquatic and terrestrial predators, suggesting that pliosaurs did not twist or shake their prey during feeding and that seizing was better performed with post-symphyseal bites. Finite element analysis identified biting-induced stress patterns in both the rostrum and lower jaws, highlighting weak areas in the rostral maxillary-premaxillary contact and the caudal mandibular symphysis. A comparatively weak skull coupled with musculature that was able to produce high forces, is explained as a trade-off between agility, hydrodynamics and strength. In the Kimmeridgian ecosystem, we conclude that Late Jurassic pliosaurs were generalist predators at the top of the food chain, able to prey on reptiles and fishes up to half their own length. © 2014 Anatomical Society.

  8. Functional anatomy and feeding biomechanics of a giant Upper Jurassic pliosaur (Reptilia: Sauropterygia) from Weymouth Bay, Dorset, UK

    PubMed Central

    Foffa, Davide; Cuff, Andrew R; Sassoon, Judyth; Rayfield, Emily J; Mavrogordato, Mark N; Benton, Michael J

    2014-01-01

    Pliosaurs were among the largest predators in Mesozoic seas, and yet their functional anatomy and feeding biomechanics are poorly understood. A new, well-preserved pliosaur from the Kimmeridgian of Weymouth Bay (UK) revealed cranial adaptations related to feeding. Digital modelling of computed tomography scans allowed reconstruction of missing, distorted regions of the skull and of the adductor musculature, which indicated high bite forces. Size-corrected beam theory modelling showed that the snout was poorly optimised against bending and torsional stresses compared with other aquatic and terrestrial predators, suggesting that pliosaurs did not twist or shake their prey during feeding and that seizing was better performed with post-symphyseal bites. Finite element analysis identified biting-induced stress patterns in both the rostrum and lower jaws, highlighting weak areas in the rostral maxillary-premaxillary contact and the caudal mandibular symphysis. A comparatively weak skull coupled with musculature that was able to produce high forces, is explained as a trade-off between agility, hydrodynamics and strength. In the Kimmeridgian ecosystem, we conclude that Late Jurassic pliosaurs were generalist predators at the top of the food chain, able to prey on reptiles and fishes up to half their own length. PMID:24925465

  9. The effects of sorting by aeolian processes on the geochemical characteristics of surface materials: a wind tunnel experiment

    NASA Astrophysics Data System (ADS)

    Wang, Xunming; Lang, Lili; Hua, Ting; Zhang, Caixia; Li, Hui

    2018-03-01

    The geochemical characteristics of aeolian and surface materials in potential source areas of dust are frequently employed in environmental reconstructions as proxies of past climate and as source tracers of aeolian sediments deposited in downwind areas. However, variations in the geochemical characteristics of these aeolian deposits that result from near-surface winds are currently poorly understood. In this study, we collected surface samples from the Ala Shan Plateau (a major potential dust source area in Central Asia) to determine the influence of aeolian processes on the geochemical characteristics of aeolian transported materials. Correlation analyses show that compared with surface materials, the elements in transported materials (e.g., Cu, As, Pb, Mn, Zn, Al, Ca, Fe, Ga, K, Mg, P, Rb, Co, Cr, Na, Nb, Si, and Zr) were subjected to significant sorting by aeolian processes, and the sorting also varied among different particle size fractions and elements. Variations in wind velocity were significantly correlated with the contents of Cr, Ga, Sr, Ca, Y, Nd, Zr, Nb, Ba, and Al, and with the Zr/Al, Zr/Rb, K/Ca, Sr/Ca, Rb/Sr, and Ca/Al ratios. Given the great variation in the geochemical characteristics of materials transported under different aeolian processes relative to those of the source materials, these results indicate that considerable uncertainty may be introduced to analyses by using surface materials to trace the potential source areas of aeolian deposits that accumulate in downwind areas.

  10. Learning needs in clinical biochemistry for doctors in foundation years.

    PubMed

    Khromova, Victoria; Gray, Trevor A

    2008-01-01

    Most medical school curricula have reduced the amount of time available for teaching in pathology despite the fact that junior staff in the early stages of their training were responsible for requesting the majority of pathology tests on acutely ill hospital patients. So, the lack of specific training in this area means that test requesting may be poorly performed and the results ill understood by these staff. This paper describes a questionnaire, which was designed to assist laboratory staff providing targeted teaching in this area. Doctors in Foundation year 1 (F1) and Foundation year 2 (F2) in Sheffield teaching hospitals were given a questionnaire to ascertain how confident they were in requesting and interpreting the results of clinical biochemistry tests. The doctors were also asked about which areas of laboratory medicine they would like to be taught. Responses were received from 82 doctors, about half those in F1 and F2. The survey revealed areas where juniors are less confident in requesting tests and interpreting results. Despite lack of confidence in interpreting the result, 18% were confident about requesting tests. Doctors were also unsure of the effects of common problems like haemolysis on the interpretation of results. More than 70% of the doctors requested specific teaching in these areas. Foundation doctors have learning needs in clinical biochemistry, addressing which would assist them in patient care. While better training in medical school may help in future, there are specific needs for those on the wards now that require targeted teaching.

  11. Neural correlates and network connectivity underlying narrative production and comprehension: a combined fMRI and PET study.

    PubMed

    AbdulSabur, Nuria Y; Xu, Yisheng; Liu, Siyuan; Chow, Ho Ming; Baxter, Miranda; Carson, Jessica; Braun, Allen R

    2014-08-01

    The neural correlates of narrative production and comprehension remain poorly understood. Here, using positron emission tomography (PET), functional magnetic resonance imaging (fMRI), contrast and functional network connectivity analyses we comprehensively characterize the neural mechanisms underlying these complex behaviors. Eighteen healthy subjects told and listened to fictional stories during scanning. In addition to traditional language areas (e.g., left inferior frontal and posterior middle temporal gyri), both narrative production and comprehension engaged regions associated with mentalizing and situation model construction (e.g., dorsomedial prefrontal cortex, precuneus and inferior parietal lobules) as well as neocortical premotor areas, such as the pre-supplementary motor area and left dorsal premotor cortex. Narrative comprehension alone showed marked bilaterality, activating right hemisphere homologs of perisylvian language areas. Narrative production remained predominantly left lateralized, uniquely activating executive and motor-related regions essential to language formulation and articulation. Connectivity analyses revealed strong associations between language areas and the superior and middle temporal gyri during both tasks. However, only during storytelling were these same language-related regions connected to cortical and subcortical motor regions. In contrast, during story comprehension alone, they were strongly linked to regions supporting mentalizing. Thus, when employed in a more complex, ecologically-valid context, language production and comprehension show both overlapping and idiosyncratic patterns of activation and functional connectivity. Importantly, in each case the language system is integrated with regions that support other cognitive and sensorimotor domains. Copyright © 2014. Published by Elsevier Ltd.

  12. Deformation patterns, magma supply, and magma storage at Karymsky Volcanic Center, Kamchatka, Russia, 2000-2010, revealed by InSAR

    NASA Astrophysics Data System (ADS)

    Ji, Lingyun; Izbekov, Pavel; Senyukov, Sergey; Lu, Zhong

    2018-02-01

    Under a complex geological region influenced by the subduction of the Pacific plate, Kamchatka Peninsula is one of the most active volcanic arcs in the Pacific Rim. Due to logistical difficulty in instrumentation, shallow magma plumbing systems beneath some of the Kamchatkan volcanoes are poorly understood. InSAR offers a safe and quick method for monitoring volcanic deformation with a high spatial resolution. In this study, a group of satellite radar interferograms that span the time interval from 2000 to 2010 shows eruptive and non-eruptive deformation at Karymsky Volcanic Center (KVC), Kamchatka, Russia. All the interferograms provide details of the activity around the KVC during 2000-2010, as follows: (1) from 2000 to 2004, the Karymsky-AN (Akademia Nauk) area deflated and the MS (Maly Semyachik) area inflated, (2) from 2004 to 2006, the Karymsky-AN area deflated with ongoing eruption, while the MS area subsided without eruption, (3) from 2006 to 2008, as with 2000-2004, the Karymsky-AN area deflated and the MS area inflated, (4) from 2008 to 2010, the Karymsky-AN area inflated up to 3 cm, and the MS area subsided. Point source models suggest that two magma reservoirs provide a good fit to the observed deformation. One source is located beneath the area between Karymsky and AN at a depth of approximately 7.0 km, and the other one is situated beneath MS at a depth of around 5.8 km. Synchronous deformation patterns suggest that two magma systems are fed from the same deep magma source and connected by a fracture zone. The InSAR results are consistent with GPS ground deformation measurements, seismic data, and petrological constraints.

  13. Technical and Sociological Investigation of Impacts in Using Lignite Mine Drainage for Irrigation - A Case Study

    NASA Astrophysics Data System (ADS)

    Murugappan, A.; Manoharan, A.; Senthilkumar, G.; Krishnamurthy, J.

    2017-07-01

    Irrigated farming depends on an ample supply of water compatible quality. Presently, a lot of irrigation projects have to depend on inferior quality and not so enviable sources of water supply. In order to prevent troubles during usage of such water supplies of poor quality, there must be meticulous preparation to ensure that the water available with such quality characteristics is put to best use. The effect of water quality upon soil and crops must be better understood in choosing fitting options to manage with impending water quality associated troubles that might decrease soil and crop productivity under existing circumstances of water use. Two tanks (small sized reservoirs) namely, Walajah Tank and Perumal Tank in Cuddalore District, used for irrigation, receive mine drainage water pumped out continuously from the open cast lignite mines of the NLC India Limited, Neyveli, Tamilnadu State. This water has been used by the farmers in the irrigated commands of both Walajah Tank and Perumal Tank for more than three decades. Recently, the beneficiaries had raised fears on the quality of mine drainage waters they had been using for raising crops in the commands of both the tanks. They opined that the coal dust laden mine water used for irrigation had affected the crop yields. This incited us to take up a study to (i) assess the status of quality of surface waters released from the two tanks for irrigation in the respective command areas and (ii) assess the likely impacts of quality of water on soil and on growth and productivity of crops cultivated in the command areas. Further to the technical evaluation of the impacts, a structured questionnaire survey was also conducted among the farmers and the common public in the study area. The findings of the survey confirmed with the outcome of the technical assessment in that the mine drainage had a poor impact in the cultivable command area of Walajah tank system while such impacts were less significant in most parts of the command area of Perumal tank system.

  14. Habitat loss and gain: Influence on habitat attractiveness for estuarine fish communities

    NASA Astrophysics Data System (ADS)

    Amorim, Eva; Ramos, Sandra; Elliott, Michael; Franco, Anita; Bordalo, Adriano A.

    2017-10-01

    Habitat structure and complexity influence the structuring and functioning of fish communities. Habitat changes are one of the main pressures affecting estuarine systems worldwide, yet the degree and rate of change and its impact on fish communities is still poorly understood. In order to quantify historical modifications in habitat structure, an ecohydrological classification system using physiotopes, i.e. units with homogenous abiotic characteristics, was developed for the lower Lima estuary (NW Portugal). Field data, aerial imagery, historical maps and interpolation methods were used to map input variables, including bathymetry, substratum (hard/soft), sediment composition, hydrodynamics (current velocity) and vegetation coverage. Physiotopes were then mapped for the years of 1933 and 2013 and the areas lost and gained over the 80 years were quantified. The implications of changes for the benthic and demersal fish communities using the lower estuary were estimated using the attractiveness to those communities of each physiotope, while considering the main estuarine habitat functions for fish, namely spawning, nursery, feeding and refuge areas and migratory routes. The lower estuary was highly affected due to urbanisation and development and, following a port/harbour expansion, its boundary moved seaward causing an increase in total area. Modifications led to the loss of most of its sandy and saltmarsh intertidal physiotopes, which were replaced by deeper subtidal physiotopes. The most attractive physiotopes for fish (defined as the way in which they supported the fish ecological features) decreased in area while less attractive ones increased, producing an overall lower attractiveness of the studied area in 2013 compared to 1933. The implications of habitat alterations for the fish using the estuary include potential changes in the nursery carrying capacity and the functioning of the fish community. The study also highlighted the poor knowledge of the impacts of habitat changes on fish due to coastal development and urbanisation and emphasises that ecosystem management and conservation will benefit from a wider understanding of habitat functional roles and habitat changes influencing the functioning and structure of the fish communities.

  15. The effects of caffeine on the cholinergic system.

    PubMed

    Pohanka, Miroslav

    2014-01-01

    Caffeine is a secondary metabolite of tea and coffee plants. It is the active psychostimulant ingredient of widely consumed beverages, chocolate and some drugs as well. The major pathways for caffeine including interaction with adenosine receptors have been identified but caffeine has several minor pathways as well that remain poorly understood including the cholinergic system. Given the role of caffeine in the cholinergic system, some molecular targets have been tracked and a mechanism of its action has been proposed in research studies. However, the biological effect of caffeine on the cholinergic system is not completely understood. The present review focuses on the role of caffeine in the cholinergic system.

  16. Microalgae on dimension stone of a medieval castle in Thuringia

    NASA Astrophysics Data System (ADS)

    Hallmann, C.; Stannek, L.; Fritzlar, D.; Hoppert, M.

    2012-04-01

    Phototrophic microorganisms are important primary producers on hard rock substrata as well as on building facades. These eukaryotic microalgae and cyanobacteria, along with lichens, have also been recognized as important factors for rock weathering and stone decay. The rock substratum itself mostly provides extreme environmental conditions. Composition and diversity of sub-aeric phototrophic microbial communities is up to now poorly understood. Here we present a comparative study addressing the composition of algal biofilms on sandstone substrata based on the analysis of rDNA clone libraries from environmental samples and enrichment cultures. From a W-exposed, shaded wall area of a medieval castle ruin (Burg Gleichen, Thuringia, Germany cf. Hallmann et al., 2011), green algae like Prasiococcus, Prasiola and Elliptochloris could be retrieved. A ESE, sun-exposed wall section was colonized mainly by Apatococcus, Phyllosiphon and the lichen alga Trebouxia and Myrmecia. Accordingly, cyanobacterial communities show clear differences between both wall areas: the sun exposed area was dominated by Synechococcus-like organisms while on the W-exposed area cyanobacteria were almost absent. Just a few species, in particular Stichococcus-related strains, are ubiquitous in both areas. It is obvious that, apart from few generalists, different species colonize the wall areas that are situated in close vicinity, but provide different microclimatic conditions. These differences are discussed in view of biogenic weathering phenomena: certain microalgal species colonize crusts and scales along fracture planes and may contribute to rapid detachment and turnover of dimension stone surfaces. Hallmann, C., Fritzlar, D., Stannek, L., Hoppert, M. (2011) Ascomycete fungi on dimension stone of the "Burg Gleichen", Thuringia. Env. Earth Sci. 63, 1713-1722.

  17. The psychosocial aspects of donating blood stem cells: the sibling donor perspective.

    PubMed

    Williams, Susan; Green, Rachel; Morrison, Anne; Watson, Douglas; Buchanan, Susan

    2003-01-01

    The collection of peripheral blood progenitor cells (PBPC) by apheresis has become common in related allogeneic donors. However, the acceptability of the procedure to donors has not been documented. The purpose of this baseline case series study was to evaluate the psycho-social dimensions of apheresis from the perspective of healthy sibling donors and to explore issues surrounding fully informed consent including voluntary donation. At the first interview to discuss donation, 17 consecutive human leucocyte antigens (HLA) identical sibling donors who chose to donate PBPC were recruited to the study. They then completed both scales of the State-Trait Anxiety Inventory. The state scale was completed again immediately before first apheresis. At the end of the final apheresis, the donors were interviewed again by an independent researcher using a standardised questionnaire. All aspects of the procedure were well tolerated, including levels of anxiety and pain. Donors donated even if the relationship with their sibling was poor. However, some areas for improvement were highlighted. Eight (47%) donors were asked to donate by their sibling or another close relative, and this gave them no real volunteer status. Written information was judged important by 11 (65%) donors, but the material used was limited. The possibility of a poor outcome for the recipient was not well understood. The content of the written documentation and the management of confidentiality in terms of donor volunteer status needed to be addressed. A further study regarding the follow-up needs of donors, including those where the outcome is poor, is underway. Copyright 2003 Wiley-Liss, Inc.

  18. Bedrock geologic map of the northern Alaska Peninsula area, southwestern Alaska

    USGS Publications Warehouse

    Wilson, Frederic H.; Blodgett, Robert B.; Blome, Charles D.; Mohadjer, Solmaz; Preller, Cindi C.; Klimasauskas, Edward P.; Gamble, Bruce M.; Coonrad, Warren L.

    2017-03-03

    The northern Alaska Peninsula is a region of transition from the classic magmatic arc geology of the Alaska Peninsula to a Proterozoic and early Paleozoic carbonate platform and then to the poorly understood, tectonically complex sedimentary basins of southwestern Alaska. Physiographically, the region ranges from the high glaciated mountains of the Alaska-Aleutian Range to the coastal lowlands of Cook Inlet on the east and Bristol Bay on the southwest. The lower Ahklun Mountains and finger lakes on the west side of the map area show strong effects from glaciation. Structurally, a number of major faults cut the map area. Most important of these are the Bruin Bay Fault that parallels the coast of Cook Inlet, the Lake Clark Fault that cuts diagonally northeast to southwest across the eastern part of the map area, and the presently active Holitna Fault to the northwest that cuts surficial deposits.Distinctive rock packages assigned to three provinces are overlain by younger sedimentary rocks and intruded by widely dispersed latest Cretaceous and (or) early Tertiary granitic rocks. Much of the east half of the map area lies in the Alaska-Aleutian Range province; the Jurassic to Tertiary Alaska-Aleutian Range batholith and derivative Jurassic sedimentary rocks form the core of this province, which is intruded and overlain by the Aleutian magmatic arc. The Lime Hills province, the carbonate platform, occurs in the north-central part of the map area. The Paleozoic and Mesozoic Ahklun Mountains province in the western part of the map area includes abundant chert, argillite, and graywacke and lesser limestone, basalt, and tectonic mélange. The Kuskokwim Group, an Upper Cretaceous turbidite sequence, is extensively exposed and bounds all three provinces in the west-central part of the map area.

  19. Eat, breathe, ROS: controlling stem cell fate through metabolism.

    PubMed

    Kubli, Dieter A; Sussman, Mark A

    2017-05-01

    Research reveals cardiac regeneration exists at levels previously deemed unattainable. Clinical trials using stem cells demonstrate promising cardiomyogenic and regenerative potential but insufficient contractile recovery. Incomplete understanding of the biology of administered cells likely contributes to inconsistent patient outcomes. Metabolism is a core component of many well-characterized stem cell types, and metabolic changes fundamentally alter stem cell fate from self-renewal to lineage commitment, and vice versa. However, the metabolism of stem cells currently studied for cardiac regeneration remains incompletely understood. Areas covered: Key metabolic features of stem cells are reviewed and unique stem cell metabolic characteristics are discussed. Metabolic changes altering stem cell fate are considered from quiescence and self-renewal to lineage commitment. Key metabolic concepts are applied toward examining cardiac regeneration through stem cell-based approaches, and clinical implications of current cell therapies are evaluated to identify potential areas of improvement. Expert commentary: The metabolism and biology of stem cells used for cardiac therapy remain poorly characterized. A growing appreciation for the fundamental relationship between stem cell functionality and metabolic phenotype is developing. Future studies unraveling links between cardiac stem cell metabolism and regenerative potential may considerably improve treatment strategies and therapeutic outcomes.

  20. Tracking a Medically Important Spider: Climate Change, Ecological Niche Modeling, and the Brown Recluse (Loxosceles reclusa)

    PubMed Central

    Saupe, Erin E.; Papes, Monica; Selden, Paul A.; Vetter, Richard S.

    2011-01-01

    Most spiders use venom to paralyze their prey and are commonly feared for their potential to cause injury to humans. In North America, one species in particular, Loxosceles reclusa (brown recluse spider, Sicariidae), causes the majority of necrotic wounds induced by the Araneae. However, its distributional limitations are poorly understood and, as a result, medical professionals routinely misdiagnose brown recluse bites outside endemic areas, confusing putative spider bites for other serious conditions. To address the issue of brown recluse distribution, we employ ecological niche modeling to investigate the present and future distributional potential of this species. We delineate range boundaries and demonstrate that under future climate change scenarios, the spider's distribution may expand northward, invading previously unaffected regions of the USA. At present, the spider's range is centered in the USA, from Kansas east to Kentucky and from southern Iowa south to Louisiana. Newly influenced areas may include parts of Nebraska, Minnesota, Wisconsin, Michigan, South Dakota, Ohio, and Pennsylvania. These results illustrate a potential negative consequence of climate change on humans and will aid medical professionals in proper bite identification/treatment, potentially reducing bite misdiagnoses. PMID:21464985

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