Changes in tree density do not influence epicormic branching of yellow-poplar

Treesearch

H. Clay Smith

1977-01-01

Epicormic branching was studied in a West Virginia yellow-poplar stand thinned to various tree density levels. Study trees in the 55- to 60-year-old second-growth stand were primarily codominant in crown class with 32 to 48 feet of log height. Eight-year study results indicated that yellow-poplar trees in this age class and locale could be thinned without serious loss...

Numerical Analysis of the Bending Properties of Cathay Poplar Glulam

PubMed Central

Gao, Ying; Wu, Yuxuan; Zhu, Xudong; Zhu, Lei; Yu, Zhiming; Wu, Yong

2015-01-01

This paper presents the formulae and finite element analysis models for predicting the Modulus of Elastic (MOE) and Modulus of Rupture (MOR) of Cathay poplar finger-jointed glulam. The formula of the MOE predicts the MOE of Cathay poplar glulam glued with one-component polyurethane precisely. Three formulae are used to predict the MOR, and Equation (12) predicts the MOR of Cathay poplar glulam precisely. The finite element analysis simulation results of both the MOE and MOR are similar to the experimental results. The predicted results of the finite element analysis are shown to be more accurate than those of the formulae, because the finite element analysis considers the glue layers, but the formulae do not. Three types of typical failure modes due to bending were summarized. The bending properties of Cathay poplar glulam were compared to those of Douglas fir glulam. The results show that Cathay poplar glulam has a lower stiffness, but a marginally higher strength. One-component polyurethane adhesive is shown to be more effective than resorcinol formaldehyde resin adhesive for Cathay poplar glulam. This study shows that Cathay poplar has the potential to be a glulam material in China. PMID:28793619

Epigenetic Diversity of Clonal White Poplar (Populus alba L.) Populations: Could Methylation Support the Success of Vegetative Reproduction Strategy?

PubMed

Guarino, Francesco; Cicatelli, Angela; Brundu, Giuseppe; Heinze, Berthold; Castiglione, Stefano

2015-01-01

The widespread poplar populations of Sardinia are vegetatively propagated and live in different natural environments forming large monoclonal stands. The main goals of the present study were: i) to investigate/measure the epigenetic diversity of the poplar populations by determining their DNA methylation status; ii) to assess if and how methylation status influences population clustering; iii) to shed light on the changes that occur in the epigenome of ramets of the same poplar clone. To these purposes, 83 white poplar trees were sampled at different locations on the island of Sardinia. Methylation sensitive amplified polymorphism analysis was carried out on the genomic DNA extracted from leaves at the same juvenile stage. The study showed that the genetic biodiversity of poplars is quite limited but it is counterbalanced by epigenetic inter-population molecular variability. The comparison between MspI and HpaII DNA fragmentation profiles revealed that environmental conditions strongly influence hemi-methylation of the inner cytosine. The variable epigenetic status of Sardinian white poplars revealed a decreased number of population clusters. Landscape genetics analyses clearly demonstrated that ramets of the same clone were differentially methylated in relation to their geographic position. Therefore, our data support the notion that studies on plant biodiversity should no longer be restricted to genetic aspects, especially in the case of vegetatively propagated plant species.

Major Chromosomal Rearrangements Distinguish Willow and Poplar After the Ancestral “Salicoid” Genome Duplication

PubMed Central

Hou, Jing; Ye, Ning; Dong, Zhongyuan; Lu, Mengzhu; Li, Laigeng; Yin, Tongming

2016-01-01

Populus (poplar) and Salix (willow) are sister genera in the Salicaceae family. In both lineages extant species are predominantly diploid. Genome analysis previously revealed that the two lineages originated from a common tetraploid ancestor. In this study, we conducted a syntenic comparison of the corresponding 19 chromosome members of the poplar and willow genomes. Our observations revealed that almost every chromosomal segment had a parallel paralogous segment elsewhere in the genomes, and the two lineages shared a similar syntenic pinwheel pattern for most of the chromosomes, which indicated that the two lineages diverged after the genome reorganization in the common progenitor. The pinwheel patterns showed distinct differences for two chromosome pairs in each lineage. Further analysis detected two major interchromosomal rearrangements that distinguished the karyotypes of willow and poplar. Chromosome I of willow was a conjunction of poplar chromosome XVI and the lower portion of poplar chromosome I, whereas willow chromosome XVI corresponded to the upper portion of poplar chromosome I. Scientists have suggested that Populus is evolutionarily more primitive than Salix. Therefore, we propose that, after the “salicoid” duplication event, fission and fusion of the ancestral chromosomes first give rise to the diploid progenitor of extant Populus species. During the evolutionary process, fission and fusion of poplar chromosomes I and XVI subsequently give rise to the progenitor of extant Salix species. This study contributes to an improved understanding of genome divergence after ancient genome duplication in closely related lineages of higher plants. PMID:27352946

WUS and STM-based reporter genes for studying meristem development in poplar

USDA-ARS?s Scientific Manuscript database

We describe the development of a reporter system for monitoring meristem initiation in poplar using promoters of poplar homologs to the meristem-active regulatory genes WUSCHEL (WUS) and SHOOTMERISTEMLESS (STM). When ~3 kb of the 5’ flanking regions of close homologs were used to drive expression o...

Growth of Appalachian hardwoods kept free to grow from 2 to 12 years after clearcutting

Treesearch

H. Clay Smith

1983-01-01

Free-to-grow sapling-size, yellow-poplars of seedling origin outgrew similar black cherry and red oak in both dbh and total height (especially on good sites). Yellow-poplar consistently grew faster in dbh throughout the study, particularly on the better oak sites. Black cherry had an edge over yellow-poplar in total height during the early years of the study, but...

Effect of Genetically Modified Poplars on Soil Microbial Communities during the Phytoremediation of Waste Mine Tailings▿†

PubMed Central

Hur, Moonsuk; Kim, Yongho; Song, Hae-Ryong; Kim, Jong Min; Choi, Young Im; Yi, Hana

2011-01-01

The application of transgenic plants to clean up environmental pollution caused by the wastes of heavy metal mining is a promising method for removing metal pollutants from soils. However, the effect of using genetically modified organisms for phytoremediation is a poorly researched topic in terms of microbial community structures, despite the important role of microorganisms in the health of soil. In this study, a comparative analysis of the bacterial and archaeal communities found in the rhizosphere of genetically modified (GM) versus wild-type (WT) poplar was conducted on trees at different growth stages (i.e., the rhizospheres of 1.5-, 2.5-, and 3-year-old poplars) that were cultivated on contaminated soils together with nonplanted control soil. Based on the results of DNA pyrosequencing, poplar type and growth stages were associated with directional changes in the structure of the microbial community. The rate of change was faster in GM poplars than in WT poplars, but the microbial communities were identical in the 3-year-old poplars. This phenomenon may arise because of a higher rate and greater extent of metal accumulation in GM poplars than in naturally occurring plants, which resulted in greater changes in soil environments and hence the microbial habitat. PMID:21890678

Low temperatures are required to induce the development of fertile flowers in transgenic male and female early flowering poplar (Populus tremula L.)

PubMed Central

Hoenicka, Hans; Lehnhardt, Denise; Briones, Valentina; Nilsson, Ove; Fladung, Matthias

2016-01-01

Until now, artificial early flowering poplar systems have mostly led to the development of sterile flowers. In this study, several strategies aimed at inducting fertile flowers in pHSP::AtFT transgenic poplar were evaluated, in particular the influence of temperature and photoperiod. Our results provide evidence that temperature, and not photoperiod, is the key factor required for the development of fertile flowers in early flowering poplar. Fertile flowers were only obtained when a cold treatment phase of several weeks was used after the heat treatment phase. Heat treatments induced AtFT gene activity through activation of the heat-shock promoter (pHSP). Photoperiod did not show a similar influence on flower fertility as pollen grains were obtained under both long- and short-day conditions. Fertility was confirmed in flowers of both male and female plants. For the first time, crosses were successfully performed with transgenic female early flowering poplar. All mature flowers obtained after 8 weeks of inductive treatments were fertile. Gene expression studies also confirmed that cold temperatures influenced expression of poplar genes homologous to ‘pollen development genes’ from Arabidopsis thaliana (L.) Heynh. Homology and expression patterns suggested a role for PtTDF1, PtBAM1, PtSERK1/2 and PtMS1 on anther and pollen development in poplar flowers. The system developed in this study allows a fast and very reliable induction of fertile poplar flowers in a very short period of time. The non-reproductive phase, usually 7–10 years, can now be shortened to 6–10 months, and fertile flowers can be obtained independently of the season. This system is a reliable tool for breeding purposes (high-speed breeding technology), genomics and biosafety research. PMID:27052434

Chlorinated Hydrocarbon Degradation in Plants: Mechanisms and Enhancement of Phytoremediation of Groundwater Contamination

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strand, Stuart E.

2002-06-01

Several varieties of transgenic poplar containing cytochrome P-450 2E1 have been constructed and are undergoing tests. Strategies for improving public acceptance and safety of transgenic poplar for chlorinated hydrocarbon phytoremediation are being developed. We have discovered a unique rhizobium species that lives within the stems of poplar and we are investigating whether this bacterium contributes nitrogen fixed from the air to the plant and whether this endophyte could be used to introduce genes into poplar. Studies of the production of chloride ion from TCE have shown that our present P-450 constructs did not produce chloride more rapidly than wild typemore » plants. Follow-up studies will determine if there are other rate limiting downstream steps in TCE metabolism in plants. Studies of the metabolism of carbon tetrachloride in poplar cells have provided evidence that the native plant metabolism is due to the activity of oxidative enzymes similar to the mammalian cytochrome P-450 2E1.« less

Contribution factor of wood properties of three poplar clones to strength of laminated veneer lumber

Treesearch

Fucheng Bao; Feng Fu; Elvin Choong; Chung-Yun Hse

2001-01-01

The term "Contribution Factor" (c.) was introduced in this paper to indicate the contribution ratio of solid wood properties to laminated veneer lumber (LVL) strength. Three poplar (Populus sp.) clones were studied, and the results showed that poplar with good solid wood properties has high Contribution Factor. The average Contribution...

Silvical Characteristics of Yellow-Poplar

Treesearch

David F. Olson

1969-01-01

Yellow-poplar (Liriorlentlron tulipifera L.) is also commonly known as tulip poplar, tulip tree, white-poplar, whitewood, and "poplar" (60). It gets its name from the tulip-like flowers which it bears in the late spring. Because of the excellent form and rapid growth of the tree, plus the fine working qualities of the wood, yellow-poplar is one of the most...

Study on adsorption and remediation of heavy metals by poplar and larch in contaminated soil.

PubMed

Wang, Xin; Jia, Youngfeng

2010-08-01

Field experiments at the Shenyang Experimental Station of Ecology were conducted to study the adsorption, accumulation, and remediation of heavy metals by poplar and larch grown in artificially contaminated soil. The soil was spiked with a combination of Cd, Cu, and Zn at concentrations of 1.5, 100, and 200 mg.kg(-1), respectively. The results showed that the biomass of poplar (Populus canadensis Moench) was lower by 26.0% in the soil spiked with a mixture of Cd, Cu, and Zn, compared with the control. Concentrations of Cd in poplar leaf and Cu in poplar roots in the treated soil were 4.11 and 14.55 mg kg(-1), respectively, which are much greater than in corresponding controls. The migration of heavy metals in woody plant body was in the order Cd > Zn > Cu. Poplar had higher metal concentrations in aboveground tissues and a higher biomass compared with larch of the same age and therefore is potentially more suitable for remediation. In the heavy metal-polluted soil of this study, phytoremediation by poplar may take 56 and 245 years for Cd and Cu, respectively, for meeting the soil standards of heavy metals, and the corresponding phytoremediation times by larch would take 211 and 438 years. The research findings could be used as a basis to develop ecological engineering technologies for environmental control and remediation of pollution caused by heavy metals in soils.

Molecular Analysis of Primary Vapor and Char Products during Stepwise Pyrolysis of Poplar Biomass

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jones, Roger W.; Reinot, Tonu; McClelland, John F.

2010-08-03

Pyrolysis of biomass produces both pyrolysis oil and solid char. In this study, poplar has been pyrolyzed in a stepwise fashion over a series of temperatures from 200 to 500°C, and both the primary products contributing to pyrolysis oil and the changes in the pyrolyzing poplar surface leading toward char have been characterized at each step. The primary products were identified by direct analysis in real time (DART) mass spectrometry, and the changes in the poplar surface were monitored using Fourier transform infrared (FTIR) photoacoustic spectroscopy, with a sampling depth of a few micrometers. The primary products from pyrolyzing cellulose,more » xylan, and lignin under similar conditions were also characterized to identify the sources of the poplar products.« less

Molecular Analysis of Primary Vapor and Char Products during Stepwise Pyrolysis of Poplar Biomass

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jones, Roger W.; Reinot, Tonu; McClelland, John F.

2010-08-30

Pyrolysis of biomass produces both pyrolysis oil and solid char. In this study, poplar has been pyrolyzed in a stepwise fashion over a series of temperatures from 200 to 500 C, and both the primary products contributing to pyrolysis oil and the changes in the pyrolyzing poplar surface leading toward char have been characterized at each step. The primary products were identified by direct analysis in real time (DART) mass spectrometry, and the changes in the poplar surface were monitored using Fourier transform infrared (FTIR) photoacoustic spectroscopy, with a sampling depth of a few micrometers. The primary products from pyrolyzingmore » cellulose, xylan, and lignin under similar conditions were also characterized to identify the sources of the poplar products.« less

Phase II Interim Report -- Assessment of Hydrocarbon Seepage Detection Methods on the Fort Peck Reservation, Northeast Montana

DOE Office of Scientific and Technical Information (OSTI.GOV)

Monson, Lawrence M.

2002-04-24

The following work was performed: (1) collected reconnaissance micro-magnetic data and background field data for Area 1, (2) identified and collected soil sample data in three anomalous regions of Area 1, (3) sampled soils in Northwest Poplar Oil Field, (4) graphed, mapped, and interpreted all data areas listed above, (5) registered for the AAPG Penrose Conference on Hydrocarbon Seepage Mechanisms and Migration (postponed from 9/16/01 until 4/7/02 in Vancouver, B.C.). Results include the identification and confirmation of an oil and gas prospect in the northwest part of Area 1 and the verification of a potential shallow gas prospect in themore » West Poplar Area. Correlation of hydrocarbon micro-seepage to TM tonal anomalies needs further data analysis.« less

[Canopy conductance characteristics of poplar in agroforestry system in west Liaoning Province of Northeast China].

PubMed

Li, Zheng; Niu, Li-Hua; Yuan, Feng-Hui; Guan, De-Xin; Wang, An-Zhi; Jin, Chang-Jie; Wu, Jia-Bing

2012-11-01

By using Granier' s thermal dissipation probe, the sap flow of poplar in a poplar-maize agroforestry system in west Liaoning was continuously measured, and as well, the environmental factors such as air temperature, air humidity, net radiation, wind speed, soil temperature, and soil moisture content were synchronically measured. Based on the sap flow data, the canopy conductance of poplar was calculated with simplified Penman-Monteith equation. In the study area, the diurnal variation of poplar' s canopy conductance showed a "single peak" curve, whereas the seasonal variation showed a decreasing trend. There was a negative logarithm relationship between the canopy conductance and vapor pressure deficit, with the sensitivity of canopy conductance to vapor pressure deficit change decreased gradually from May to September. The canopy conductance had a positive relationship with solar radiation. In different months, the correlation degree of canopy conductance with environmental factors differed. The vapor pressure deficit in the whole growth period of poplar was the most significant environmental factor correlated with the canopy conductance.

The genetic architecture of shoot-root covariation during seedling emergence of a desert tree, Populus euphratica.

PubMed

Zhang, Miaomiao; Bo, Wenhao; Xu, Fang; Li, Huan; Ye, Meixia; Jiang, Libo; Shi, Chaozhong; Fu, Yaru; Zhao, Guomiao; Huang, Yuejiao; Gosik, Kirk; Liang, Dan; Wu, Rongling

2017-06-01

The coordination of shoots and roots is critical for plants to adapt to changing environments by fine-tuning energy production in leaves and the availability of water and nutrients from roots. To understand the genetic architecture of how these two organs covary during developmental ontogeny, we conducted a mapping experiment using Euphrates poplar (Populus euphratica), a so-called hero tree able to grow in the desert. We geminated intraspecific F 1 seeds of Euphrates Poplar individually in a tube to obtain a total of 370 seedlings, whose shoot and taproot lengths were measured repeatedly during the early stage of growth. By fitting a growth equation, we estimated asymptotic growth, relative growth rate, the timing of inflection point and duration of linear growth for both shoot and taproot growth. Treating these heterochronic parameters as phenotypes, a univariate mapping model detected 19 heterochronic quantitative trait loci (hQTLs), of which 15 mediate the forms of shoot growth and four mediate taproot growth. A bivariate mapping model identified 11 pleiotropic hQTLs that determine the covariation of shoot and taproot growth. Most QTLs detected reside within the region of candidate genes with various functions, thus confirming their roles in the biochemical processes underlying plant growth. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

Bedding Improves Yellow-Poplar Growth on Fragipan Soils

Treesearch

John K. Francis

1979-01-01

Yellow-poplar can be grown on soils that have a shallow fragipan--but unless such sites are bedded, growth is likely to be extremely poor. In a Tennessee study, bedding increased height of planted yellow-poplar over 5 years, but fertilizer did not. Because of the cost of bedding and the availability of nonfragipan sites, it would ordinarily be better not to plant...

Confirmation of Single-Locus Sex Determination and Female Heterogamety in Willow Based on Linkage Analysis.

PubMed

Chen, Yingnan; Wang, Tiantian; Fang, Lecheng; Li, Xiaoping; Yin, Tongming

2016-01-01

In this study, we constructed high-density genetic maps of Salix suchowensis and mapped the gender locus with an F1 pedigree. Genetic maps were separately constructed for the maternal and paternal parents by using amplified fragment length polymorphism (AFLP) markers and the pseudo-testcross strategy. The maternal map consisted of 20 linkage groups that spanned a genetic distance of 2333.3 cM; whereas the paternal map contained 21 linkage groups that covered 2260 cM. Based on the established genetic maps, it was found that the gender of willow was determined by a single locus on linkage group LG_03, and the female was the heterogametic gender. Aligned with mapped SSR markers, linkage group LG_03 was found to be associated with chromosome XV in willow. It is noteworthy that marker density in the vicinity of the gender locus was significantly higher than that expected by chance alone, which indicates severe recombination suppression around the gender locus. In conclusion, this study confirmed the findings on the single-locus sex determination and female heterogamety in willow. It also provided additional evidence that validated the previous studies, which found that different autosomes evolved into sex chromosomes between the sister genera of Salix (willow) and Populus (poplar).

Confirmation of Single-Locus Sex Determination and Female Heterogamety in Willow Based on Linkage Analysis

PubMed Central

Fang, Lecheng; Li, Xiaoping; Yin, Tongming

2016-01-01

In this study, we constructed high-density genetic maps of Salix suchowensis and mapped the gender locus with an F1 pedigree. Genetic maps were separately constructed for the maternal and paternal parents by using amplified fragment length polymorphism (AFLP) markers and the pseudo-testcross strategy. The maternal map consisted of 20 linkage groups that spanned a genetic distance of 2333.3 cM; whereas the paternal map contained 21 linkage groups that covered 2260 cM. Based on the established genetic maps, it was found that the gender of willow was determined by a single locus on linkage group LG_03, and the female was the heterogametic gender. Aligned with mapped SSR markers, linkage group LG_03 was found to be associated with chromosome XV in willow. It is noteworthy that marker density in the vicinity of the gender locus was significantly higher than that expected by chance alone, which indicates severe recombination suppression around the gender locus. In conclusion, this study confirmed the findings on the single-locus sex determination and female heterogamety in willow. It also provided additional evidence that validated the previous studies, which found that different autosomes evolved into sex chromosomes between the sister genera of Salix (willow) and Populus (poplar). PMID:26828940

Lignin Sulfonation and SO2 Addition Enhance the Hydrolyzability of Deacetylated and Then Steam-Pretreated Poplar with Reduced Inhibitor Formation.

PubMed

Tang, Yong; Dou, Xiaoli; Hu, Jinguang; Jiang, Jianxin; Saddler, Jack N

2018-01-01

The merit of deacetylation of corn stover prior to pretreatment is decreasing the formation of inhibitors and improving enzyme hydrolysis, proved in dilute acid pretreatment. However, few studies are done on how deacetylation would affect bioconversion process containing steam explosion. In this study, the effect of deacetylation on steam explosion was conducted using poplar as substrate. About 57 to 90% of acetyl group in poplar, depending on alkaline types and concentration, was removed by dilute alkaline deacetylation in 6 h. Deacetylation eliminated over 85% of inhibitor formation during downstream steam explosion. However, deacetylation prior to steam explosion decreased the dissolution of hemicellulose, thus reducing the cellulose accessibility of pretreated poplar, finally resulting in 5-20% decrease in glucose yield and 20-35% decrease in xylose yield. The addition of 5% SO 2 during steam explosion significantly improved the hydrolysis of deacetylated and pretreated poplar without significantly increasing the concentration of inhibitors. Incorporating 45 mmol/kg sulfoacid group in lignin fraction of deacetylated and then pretreated poplar dramatically improved the xylose yield to about 100% and increased the glucose yield by 30%.

Soil Investigation of Lower East Fork Poplar Creek

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dickson, Johnbull O.; Mayes, Melanie; Earles, Jennifer E.

2017-03-01

Mercury is regarded by the US Department of Energy (DOE) Oak Ridge Office of Environmental Management as a priority contaminant on the Oak Ridge Reservation because of the environmental risks associated with substantial losses from buildings, soils, and surface waters at the Y-12 National Security Complex (Y-12). As a result of historical releases of mercury from Y-12 primarily in the 1950s and early 1960s, the lower East Fork Poplar Creek (LEFPC) stream channel and bank soil margins are contaminated with mercury (Brooks and Southworth 2011; Tennessee Valley Authority 1985b, a). A Mercury Remediation Technology Development project is underway to evaluatemore » the nature of downstream mercury contamination and to develop targeted site-specific remedial technologies that can mitigate mercury release and biological uptake. It is known that mercury concentration varies longitudinally and with depth in LEFPC bank soils; however, soil types and soil physical properties are not well known, especially relative to the zones of mercury contamination. Moreover, there are no soil maps for the downstream reaches of LEFPC in Roane County (i.e. from the Chestnut Hill Road downstream) and this work represents the first ever soil mapping along this section of LEFPC.« less

Diversity of arthropod community in transgenic poplar-cotton ecosystems.

PubMed

Zhang, D J; Lu, Z Y; Liu, J X; Li, C L; Yang, M S

2015-12-02

Poplar-cotton agro-ecosystems are the main agricultural planting modes of plain cotton fields in China. Here, we performed a systematic survey of the diversity and population of arthropod communities in four different combination of poplar-cotton eco-systems, including I) non-transgenic poplar and non-transgenic cotton fields; II) non-transgenic poplar and transgenic cotton fields [Bacillus thuringiensis (Bt) cotton]; III) Bt transgenic poplar (high insect resistant strain Pb29) and non-transgenic cotton; and IV) transgenic poplar and transgenic cotton fields, over a period of 3 years. Based on the statistical methods used to investigate community ecology, the effects of transgenic ecosystems on the whole structure of the arthropod community, on the structure of arthropods in the nutritive layer, and on the similarity of arthropod communities were evaluated. The main results were as follows: the transgenic poplar-cotton ecosystem has a stronger inhibitory effect on insect pests and has no impact on the structure of the arthropod community, and therefore, maintains the diversity of the arthropod community. The character index of the community indicated that the structure of the arthropod community of the transgenic poplar-cotton ecosystem was better than that of the poplar-cotton ecosystem, and that system IV had the best structure. As for the abundance of nutritional classes, the transgenic poplar-cotton ecosystem was also better than that of the non-transgenic poplar-cotton ecosystem. The cluster analysis and similarity of arthropod communities between the four different transgenic poplar-cotton ecosystems illustrated that the structure of the arthropod community excelled in the small sample of the transgenic poplar-cotton ecosystems.

Identification of a novel hydroxylated metabolite of 2,2′,3,5′,6-pentachlorobiphenyl formed in whole poplar plants

PubMed Central

Ma, Cunxian; Zhai, Guangshu; Wu, Huimin; Kania-Korwel, Izabela; Lehmler, Hans-Joachim; Schnoor, Jerald L

2015-01-01

Polychlorinated biphenyls (PCBs) are a group of persistent organic pollutants consisting of 209 congeners. Oxidation of several PCB congeners to hydroxylated PCBs (OH-PCBs) in whole poplar plants has been reported before. Moreover, 2,2′,3,5′,6-pentachlorobiphenyl (PCB95), as a chiral congener, has been previously shown to be atropselectively taken up and transformed in whole poplar plants. The objective of this study was to determine if PCB95 is atropselectively metabolized to OH-PCBs in whole poplar plants. Two hydroxylated PCB95s were detected by high performance liquid chromatography-mass spectrometry in the roots of whole poplar plants exposed to racemic PCB95 for 30 days. The major metabolite was confirmed to be 4′-hydroxy-2,2′,3,5′,6-pentachlorobiphenyl (4′-OH-PCB95) by gas chromatography-mass spectrometry (GC-MS) using an authentic reference standard. Enantioselective analysis showed that 4′-OH-PCB95 was formed atropselectively, with the atropisomer eluting second on the Nucleodex β-PM column (E2-4′-OH-PCB95) being slightly more abundant in the roots of whole poplar plants. Therefore, PCB95 can at least be metabolized into 4′-OH-PCB95 and another unknown hydroxylated PCB95 (as a minor metabolite) in whole poplar plants. Both atropisomers of 4′-OH-PCB95 are formed, but E2-4′-OH-PCB95 has greater atropisomeric enrichment in the roots of whole poplar plants. A comparison with mammalian biotransformation studies indicates a distinctively different metabolite profile of OH-PCB95 metabolites in whole poplar plants. Our observations suggest that biotransformation of chiral PCBs to OH-PCBs by plants may represent an important source of enantiomerically enriched OH-PCBs in the environment. PMID:26676542

Different autosomes evolved into sex chromosomes in the sister genera of Salix and Populus

PubMed Central

Hou, Jing; Ye, Ning; Zhang, Defang; Chen, Yingnan; Fang, Lecheng; Dai, Xiaogang; Yin, Tongming

2015-01-01

Willows (Salix) and poplars (Populus) are dioecious plants in Salicaceae family. Sex chromosome in poplar genome was consistently reported to be associated with chromosome XIX. In contrast to poplar, this study revealed that chromosome XV was sex chromosome in willow. Previous studies revealed that both ZZ/ZW and XX/XY sex-determining systems could be present in some species of Populus. In this study, sex of S. suchowensis was found to be determined by the ZW system in which the female was the heterogametic gender. Gene syntenic and collinear comparisons revealed macrosynteny between sex chromosomes and the corresponding autosomes between these two lineages. By contrast, no syntenic segments were found to be shared between poplar's and willow's sex chromosomes. Syntenic analysis also revealed substantial chromosome rearrangements between willow's alternate sex chromatids. Since willow and poplar originate from a common ancestor, we proposed that evolution of autosomes into sex chromosomes in these two lineages occurred after their divergence. Results of this study indicate that sex chromosomes in Salicaceae are still at the early stage of evolutionary divergence. Additionally, this study provided valuable information for better understanding the genetics and evolution of sex chromosome in dioecious plants. PMID:25766834

Survival and growth of yellow-poplar seedlings depend on date of germination

Treesearch

George R., Jr. Trimble; E. H. Tryon

1969-01-01

A study of yellow-poplar seedlings showed that early survival and growth were best among stems that originated in May and early June. Few, if any, seedlings that emerged after 1 July were in favorable competitive condition 3 years later. This indicates that clearcuttings made for maximum natural regeneration of yellow-poplar should be carried out in fall and winter to...

Low temperatures are required to induce the development of fertile flowers in transgenic male and female early flowering poplar (Populus tremula L.).

PubMed

Hoenicka, Hans; Lehnhardt, Denise; Briones, Valentina; Nilsson, Ove; Fladung, Matthias

2016-05-01

Until now, artificial early flowering poplar systems have mostly led to the development of sterile flowers. In this study, several strategies aimed at inducting fertile flowers in pHSP::AtFT transgenic poplar were evaluated, in particular the influence of temperature and photoperiod. Our results provide evidence that temperature, and not photoperiod, is the key factor required for the development of fertile flowers in early flowering poplar. Fertile flowers were only obtained when a cold treatment phase of several weeks was used after the heat treatment phase. Heat treatments induced AtFT gene activity through activation of the heat-shock promoter (pHSP). Photoperiod did not show a similar influence on flower fertility as pollen grains were obtained under both long- and short-day conditions. Fertility was confirmed in flowers of both male and female plants. For the first time, crosses were successfully performed with transgenic female early flowering poplar. All mature flowers obtained after 8 weeks of inductive treatments were fertile. Gene expression studies also confirmed that cold temperatures influenced expression of poplar genes homologous to 'pollen development genes' from Arabidopsis thaliana (L.) Heynh. Homology and expression patterns suggested a role for PtTDF1, PtBAM1, PtSERK1/2 and PtMS1 on anther and pollen development in poplar flowers. The system developed in this study allows a fast and very reliable induction of fertile poplar flowers in a very short period of time. The non-reproductive phase, usually 7-10 years, can now be shortened to 6-10 months, and fertile flowers can be obtained independently of the season. This system is a reliable tool for breeding purposes (high-speed breeding technology), genomics and biosafety research. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Pretreatment of corn stover and hybrid poplar by sodium hydroxide and hydrogen peroxide.

PubMed

Gupta, Rajesh; Lee, Y Y

2010-01-01

Sodium hydroxide and its derivatives are used as pulping reagents, wherein the spent NaOH is recovered in salt form and reused. In this study, use of low concentration NaOH (1-5%) in pretreatment of corn stover and hybrid poplar was investigated. It was done with the understanding that NaOH can be recovered. One of the main objectives in this study is to explore the potential of H(2)O(2) with NaOH for pretreatment of high lignin substrate such as hybrid poplar. Pretreatment time has not been optimized in this study but held constant at 24 h. Corn stover, after treatment with NaOH under moderate conditions, attains near quantitative glucan digestibility. On the other hand, hybrid poplar requires treatment at higher temperature and NaOH concentration to attain acceptable level of digestibility. Supplementation of hydrogen peroxide in the pretreatment significantly raises delignification and digestibility of hybrid poplar. It was also helpful in retaining the carbohydrates in the treated solids. Retention of hemicellulose after pretreatment provides a significant economic benefit as it eliminates the need for detoxifying hemicellulose sugars. As the residual xylan remaining after pretreatment is an impediment to enzymatic digestion of glucan, supplementation of xylanase has significantly increased the digestibility of glucan as well as xylan of the treated hybrid poplar. (c) 2010 American Institute of Chemical Engineers

Analyzing the impact of climate and management factors on the productivity and soil carbon sequestration of poplar plantations.

PubMed

Wang, Dan; Fan, Jiazhi; Jing, Panpan; Cheng, Yong; Ruan, Honghua

2016-01-01

It is crucial to investigate how climate and management factors impact poplar plantation production and soil carbon sequestration interactively. We extracted above-ground net primary production (ANPP), climate and management factors from peer-reviewed journal articles and analyzed impact of management factor and climate on the mean annual increment (MAI) of poplar ANPP statistically. Previously validated mechanistic model (ED) is used to perform case simulations for managed poplar plantations under different harvesting rotations. The meta-analysis indicate that the dry matter MAI was 6.3 Mg ha(-1) yr(-1) (n=641, sd=4.9) globally, and 5.1 (n=292, sd=4.0), 8.1 (n=224, sd=4.7) and 4.4 Mg ha(-1) yr(-1) (n=125, sd=3.2) in Europe, the US and China, respectively. Poplar MAI showed a significant response to GDD, precipitation and planting density and formed a quadratic relationship with stand age. The low annual production for poplar globally was probably caused by suboptimal water availability, rotation length and planting density. SEM attributes the variance of poplar growth rate more to climate than to management effects. Case simulations indicated that longer rotation cycle significantly increased soil carbon storage. Findings of this work suggests that management factor of rotation cycle alone could have dramatic impact on the above ground growth, as well as on the soil carbon sequestration of poplar plantations and will be helpful to quantify the long-term carbon sequestration through short rotation plantation. The findings of this study are useful in guiding further research, policy and management decisions towards sustainable poplar plantations. Copyright © 2015 Elsevier Inc. All rights reserved.

Biochemical response of hybrid black poplar tissue culture (Populus × canadensis) on water stress.

PubMed

Popović, B M; Štajner, D; Ždero-Pavlović, R; Tari, I; Csiszár, J; Gallé, Á; Poór, P; Galović, V; Trudić, B; Orlović, S

2017-05-01

In this study, poplar tissue culture (hybrid black poplar, M1 genotype) was subjected to water stress influenced by polyethyleneglycol 6000 (100 and 200 mOsm PEG 6000). The aim of the research was to investigate the biochemical response of poplar tissue culture on water deficit regime. Antioxidant status was analyzed including antioxidant enzymes, superoxide-dismutase (SOD), catalase (CAT), guiacol-peroxidase (GPx), glutathione-peroxidase (GSH-Px), glutathione-reductase, reduced glutathione, total phenol content, Ferric reducing antioxidant power and DPPH radical antioxidant power. Polyphenol oxidase and phenylalanine-ammonium-lyase were determined as enzymatic markers of polyphenol metabolism. Among oxidative stress parameters lipid peroxidation, carbonyl-proteins, hydrogen-peroxide, reactive oxygen species, nitric-oxide and peroxynitrite were determined. Proline, proline-dehydrogenase and glycinebetaine were measured also as parameters of water stress. Cell viability is finally determined as a biological indicator of osmotic stress. It was found that water stress induced reactive oxygen and nitrogen species and lipid peroxidation in leaves of hybrid black poplar and reduced cell viability. Antioxidant enzymes including SOD, GPx, CAT and GSH-Px were induced but total phenol content and antioxidant capacity were reduced by PEG 6000 mediated osmotic stress. The highest biochemical response and adaptive reaction was the increase of proline and GB especially by 200 mOsm PEG. While long term molecular analysis will be necessary to fully address the poplar potentials for water stress adaptation, our results on hybrid black poplar suggest that glycine-betaine, proline and PDH enzyme might be the most important markers of poplar on water stress and that future efforts should be focused on these markers and strategies to enhance their concentration in poplar.

Effect of calcium cyanamide on growth and nutrition of plan fed yellow-poplar seedlings

Treesearch

L.R. Auchmoody; G.W. Wendel; G.W. Wendel

1973-01-01

Calcium cyanamide, a nitrogenous fertilizer that also acts as an herbicide, was evaluated over a 3-year period for use in establishing planted yellow-poplar on an old-field site. Results of this study show that first and second year growth of yellow-poplar can be increased by nbroadcasting CaCN2 around the seedlings. When applied at rates of 400 to 500 pounds of...

Ecosystem development on terraces along the Kugururok River, northwest Alaska

USGS Publications Warehouse

Binkley, Dan; Suarez, F.; Stottlemyer, R.; Caldwell, B.

1997-01-01

Riverside terraces along the Kugururok River in the Noatak National Preserve provided an opportunity to study primary succession, considering general trends that apply across all terraces, and unique events that influence individual terraces. The 30-year-old willow/poplar (Salix spp., Populus balsamifera L.) terrace had no trees taller than 1.5 m; the abundant spruce trees were not tall enough to emerge from the canopy height of the willows and poplars, and moose (Alces alces [Clinton]) browsing limited the canopy height of these plants. The 75-year-old poplar/spruce (Picea glauca [Moench] Voss) terrace had a high density of poplars (> 1000/ha) and low density of spruce (125/ha); heavy browsing by moose reduced the density of poplar by about one-half. The removal of the poplar by moose in this stand resulted in sustained increases in growth of individual spruce trees. The 100-year-old younger spruce/poplar terrace had about twice as many spruce trees (1250/ha) as poplar trees (500/ha), and the spruce trees were larger on average than the poplar trees. In the 220+ year-old older spruce/poplar type, only a few poplars remained (about 25/ha), and the number of spruce trees (600/ha) was only half that of the younger stage, either from lower initial spruce density on this terrace, or increased mortality of spruce. The 240+ year-old spruce type was a second-generation forest, characterized by a high density (1950/ha) of small spruce trees, some of which were tilted, indicating discontinuous permafrost. Plant litterfall mass showed no strong trend with terrace age, although N content of litterfall appeared to decline by about 1/3 in the spruce-dominated stages. Fungal biomass increased with ecosystem age, whereas bacterial biomass and microfauna declined. We found no evidence of declining soil N supply in older stages, but fertilization experiments would be needed to determine if N limitation of productivity changed with ecosystem development. We conclude that the general successional trend of increased spruce dominance is robust for this location, but that unique events play important roles in determining tree densities and the timing of the shift in dominance from poplar to spruce. The arrival of moose in the 1970s accelerated dominance by spruce on young terraces.

The effect of altered lignin composition on mechanical properties of CINNAMYL ALCOHOL DEHYDROGENASE (CAD) deficient poplars.

PubMed

Özparpucu, Merve; Gierlinger, Notburga; Burgert, Ingo; Van Acker, Rebecca; Vanholme, Ruben; Boerjan, Wout; Pilate, Gilles; Déjardin, Annabelle; Rüggeberg, Markus

2018-04-01

CAD-deficient poplars enabled studying the influence of altered lignin composition on mechanical properties. Severe alterations in lignin composition did not influence the mechanical properties. Wood represents a hierarchical fiber-composite material with excellent mechanical properties. Despite its wide use and versatility, its mechanical behavior has not been entirely understood. It has especially been challenging to unravel the mechanical function of the cell wall matrix. Lignin engineering has been a useful tool to increase the knowledge on the mechanical function of lignin as it allows for modifications of lignin content and composition and the subsequent studying of the mechanical properties of these transgenics. Hereby, in most cases, both lignin composition and content are altered and the specific influence of lignin composition has hardly been revealed. Here, we have performed a comprehensive micromechanical, structural, and spectroscopic analysis on xylem strips of transgenic poplar plants, which are downregulated for cinnamyl alcohol dehydrogenase (CAD) by a hairpin-RNA-mediated silencing approach. All parameters were evaluated on the same samples. Raman microscopy revealed that the lignin of the hpCAD poplars was significantly enriched in aldehydes and reduced in the (relative) amount of G-units. FTIR spectra indicated pronounced changes in lignin composition, whereas lignin content was not significantly changed between WT and the hpCAD poplars. Microfibril angles were in the range of 18°-24° and were not significantly different between WT and transgenics. No significant changes were observed in mechanical properties, such as tensile stiffness, ultimate stress, and yield stress. The specific findings on hpCAD poplar allowed studying the specific influence of lignin composition on mechanics. It can be concluded that the changes in lignin composition in hpCAD poplars did not affect the micromechanical tensile properties.

Observations on a hybrid poplar test planting in West Virginia

Treesearch

Arthur R. Eschner

1960-01-01

Hybrid poplars, crosses between European and American Aigeiros poplars, have been grown in Europe for about 200 years. The rapid growth and high productivity of some of these hybrids on sites to which they are adapted has stimulated interest in poplar growing in this country. And demand for these poplars is developing in many parts of the United States.

Borehole geophysical data for the East Poplar oil field area, Fort Peck Indian Reservation, northeastern Montana, 1993, 2004, and 2005

USGS Publications Warehouse

Smith, Bruce D.; Thamke, Joanna N.; Tyrrell, Christa

2014-01-01

Areas of high electrical conductivity in shallow aquifers in the East Poplar oil field area were delineated by the U.S. Geological Survey (USGS), in cooperation with the Fort Peck Assiniboine and Sioux Tribes, in order to interpret areas of saline-water contamination. Ground, airborne, and borehole geophysical data were collected in the East Poplar oil field area from 1992 through 2005 as part of this delineation. This report presents borehole geophysical data for thirty-two wells that were collected during, 1993, 2004, and 2005 in the East Poplar oil field study area. Natural-gamma and induction instruments were used to provide information about the lithology and conductivity of the soil, rock, and water matrix adjacent to and within the wells. The well logs were also collected to provide subsurface controls for interpretation of a helicopter electromagnetic survey flown over most of the East Poplar oil field in 2004. The objective of the USGS studies was to improve understanding of aquifer hydrogeology particularly in regard to variations in water quality.

A survey of the pyrabactin resistance-like abscisic acid receptor gene family in poplar.

PubMed

Yu, Jingling; Li, Hejuan; Peng, Yajing; Yang, Lei; Zhao, Fugeng; Luan, Sheng; Lan, Wenzhi

2017-08-03

The conserved PYR/PYL/RCAR family acts as abscisic acid (ABA) receptors for land plants to adapt to terrestrial environments. Our recent study reported that the exogenous overexpression of poplar PtPYRL1 and PtPYRL5, the PYR/PYL/RCAR orthologs, promoted the sensitivity of transgenic Arabidopsis to ABA responses. Here, we surveyed the PtPYRL family in poplar, and revealed that although the sequence and structure are relatively conserved among these receptors, PtPYRL members have differential expression patterns and the sensitivity to ABA or drought treatment, suggesting that PtPYRLs might be good candidates to a future biotechnological use to enhance poplar resistance to water-stress environments.

Investigation on effect of Populus alba stands distance on density of pests and their natural enemies population under poplar/alfalfa agroforestry system.

PubMed

Khabir, Z H; Sadeghi, S E; Hanifeh, S; Eivazi, A

2009-01-15

This study was carried out in order to distinguish the effect of agroforestry system (combination of agriculture and forestry) on pests and natural enemy's population in poplar research station. Wood is one of the first substances that naturally was used for a long period of time. Forage is an important production of natural resources too. Some factors such as proper lands deficit, lack of economy, pest and disease attacks and faced production of these materials with serious challenges. Agroforestry is a method for decrease of the mentioned problems. The stands of poplar had have planted by complete randomized design with 4 treatments (stand distance) of poplar/alfalfa include 3x4, 3x6.7, 3x8, 3x10 m and 2 control treatments, alfalfa and poplar. The results showed that Chaitophorus populeti had the highest density in poplar and 3x10 m treatments. Monosteira unicostata is another insect pest that had most density in 3x10 m treatment. And alfalfa had high density of Chrysoperla carnea. The density of Coccinella septempunctata, were almost equal in all treatments.

Investigating the Role of Extensin Proteins in Poplar Biomass Recalcitrance

DOE PAGES

Fleming, Margaret Brigham; Decker, Stephen R.; Bedinger, Patricia A.

2016-02-03

The biological conversion of cellulosic biomass to biofuel is hindered by cell wall recalcitrance, which can limit the ability of cellulases to access and break down cellulose. The purpose of this study was to investigate whether hydroxyproline-rich cell wall proteins (extensins) are present in poplar stem biomass, and whether these proteins may contribute to recalcitrance. Three classical extensin genes were identified in Populus trichocarpa through bioinformatic analysis of poplar genome sequences, with the following proposed names: PtEXTENSIN1 (Potri.001G019700); PtEXTENSIN2 (Potri.001G020100); PtEXTENSIN3 (Potri.018G050100). Tissue print immunoblots localized the extensin proteins in poplar stems to regions near the vascular cambium. Different thermochemicalmore » pretreatments reduced but did not eliminate hydroxyproline (Hyp, a proxy for extensins) from the biomass. Protease treatment of liquid hot water-pretreated poplar biomass reduced Hyp content by a further 16% and increased subsequent glucose yield by 20%. These data suggest that extensins may contribute to recalcitrance in pretreated poplar biomass, and that incorporating protease treatment into pretreatment protocols could result in a small but significant increase in the yield of fermentable glucose.« less

Ecology and silviculture of poplar plantations.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Stanturf, John A.; Van Oosten, Cees; Netzer, Daniel A.

2002-07-01

D.I.; Isebrands, J.G.; Eckenwalder, J.E.; Richardson, J., eds. Poplar culture in North America, part A, chapter 5. Ottawa: NRC Research Press, National Research Council of Canada: 153-206. ABSTRACT. Poplars are some of the fastest growing trees in North America and foresters have sought to capitalize on this potential since the 1940s. Interest in growing poplars has fluctuated, and objectives have shifted between producing sawlogs, pulp-wood, or more densely spaced "woodgrass" or biofuels. Currently, most poplar plantations are established for pulpwood or chip production on rotations of 10 years or less, but interest in sawlog production is increasing. Sid McKnight characterizedmore » cottonwood as a prima donna species: under ideal conditions, growth rates are just short of spectacular. Just as this can be applied to all poplars, it is equally true that all poplars are demanding of good sites and careful establishment. Growing poplars in plantations is challenging, and good establishment the first year is critical to long-term success. If a grower lacks the commitment or resources to provide needed treatments at critical times, then species other than poplars should be considered. Our objective in this chapter is to provide growers with current information for establishing and tending poplar plantations, as practiced in North America. Where we have sufficient information, differences between the poplar-growing regions of the United States and Canada will be noted. Mostly information is available on eastern and black cottonwood and their hybrids.« less

Finding Fingerprints of Selection in Poplar Genomes

ScienceCinema

Tuskan, Gerald

2018-05-30

Jerry Tuskan of Oak Ridge National Laboratory and the DOE JGI talks about poplar trees as models for selective adaptation to an environment. This video complements a study published ahead online August 24, 2014 in Nature Genetics.

A Field Trial of TCE Phytoremediation by Genetically Modified Poplars Expressing Cytochrome P450 2E1.

PubMed

Legault, Emily K; James, C Andrew; Stewart, Keith; Muiznieks, Indulis; Doty, Sharon L; Strand, Stuart E

2017-06-06

A controlled field study was performed to evaluate the effectiveness of transgenic poplars for phytoremediation. Three hydraulically contained test beds were planted with 12 transgenic poplars, 12 wild type (WT) poplars, or left unplanted, and dosed with equivalent concentrations of trichloroethylene (TCE). Removal of TCE was enhanced in the transgenic tree bed, but not to the extent of the enhanced removal observed in laboratory studies. Total chlorinated ethene removal was 87% in the CYP2E1 bed, 85% in the WT bed, and 34% in the unplanted bed in 2012. Evapotranspiration of TCE from transgenic leaves was reduced by 80% and diffusion of TCE from transgenic stems was reduced by 90% compared to WT. Cis-dichloroethene and vinyl chloride levels were reduced in the transgenic tree bed. Chloride ion accumulated in the planted beds corresponding to the TCE loss, suggesting that contaminant dehalogenation was the primary loss fate.

Design of experiments on 135 cloned poplar trees to map environmental influence in greenhouse.

PubMed

Pinto, Rui Climaco; Stenlund, Hans; Hertzberg, Magnus; Lundstedt, Torbjörn; Johansson, Erik; Trygg, Johan

2011-01-31

To find and ascertain phenotypic differences, minimal variation between biological replicates is always desired. Variation between the replicates can originate from genetic transformation but also from environmental effects in the greenhouse. Design of experiments (DoE) has been used in field trials for many years and proven its value but is underused within functional genomics including greenhouse experiments. We propose a strategy to estimate the effect of environmental factors with the ultimate goal of minimizing variation between biological replicates, based on DoE. DoE can be analyzed in many ways. We present a graphical solution together with solutions based on classical statistics as well as the newly developed OPLS methodology. In this study, we used DoE to evaluate the influence of plant specific factors (plant size, shoot type, plant quality, and amount of fertilizer) and rotation of plant positions on height and section area of 135 cloned wild type poplar trees grown in the greenhouse. Statistical analysis revealed that plant position was the main contributor to variability among biological replicates and applying a plant rotation scheme could reduce this variation. Copyright © 2010 Elsevier B.V. All rights reserved.

Insect enemies of yellow-poplar

Treesearch

Denver P. Burns; Denver P. Burns

1970-01-01

Yellow-poplar, like the other desirable hardwoods, is attacked by a variety of insects. However, only four species of insects are considered economically important: the tuliptree scale, the yellow-poplar weevil, the root-collar borer, and the Columbian timber beetle. These are native enemies of yellow-poplar (Liriodendvon tzllipifera L.) wherever the tree grows.

Clinch River - Environmental Restoration Program (CR-ERP) study, ambient water toxicity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simbeck, D.J.

1997-06-01

Clinch River - Environmental Restoration Program (CR-ERP) personnel and Tennessee Valley Authority (TVA) personnel conducted a study during the week of April 14-21, 1994, as described in the Statement of Work (SOW) document. The organisms specified for testing were larval fathead minnows, Pimephales promelas, and the daphnid, Ceriodaphnia dubia. Surface water samples were collected by TVA Field Engineering personnel from Poplar Creek Mile 4.3, Poplar Creek Mile 5.1, and Poplar Creek Mile 6.0 on April 13, 15, and 18. Samples were partitioned (split) and provided to the CR-ERP and TVA toxicology laboratories for testing. Exposure of test organisms to thesemore » samples resulted in no toxicity (survival or growth) to daphnids in undiluted samples; however, toxicity to fathead minnows (significantly reduced survival) was demonstrated in undiluted samples from Poplar Creek Miles 4.3 and 6.0 in testing conducted by TVA based on hypothesis testing of data. Daphnid reproduction was significantly less than controls in 50 percent dilutions of samples from Poplar Creek Miles 4.3 and 6.0, while no toxicity to fathead minnows was shown in diluted (50 percent) samples.« less

[Spatio-temporal characteristics of the expansion of poplar plantation in West Dongting Lake wetland, China.

PubMed

Jing, Lei; Lyu, Cai; Zhou, Yan; Zuo, Ao Jie; Lei, Guang Chun

2016-07-01

The rapid expansion of poplar plantation and its impacts on the wetland ecosystem have become a critical issue in West Dongting Lake ecosystem management. In the study, we explored the spatio-temporal characteristics of poplar plantation distribution in West Dongting Lake from 2000-2014 using Landsat imagery, topographic and hydrological data. Results showed that the area of the poplar plantation increased from 3233.5 hm 2 to 10915.6 hm 2 during the period of 2000 to 2011 (i.e. mean growth rate was 698.4 hm 2 ·a -1 ), and the highest growth rate happened during the period of 2004 to 2007 (1000.6 hm 2 ·a -1 ). Then, from 2011 to 2014, the expansion rate recorded a net loss, with the total poplar plantation area decreasing to 10153.1 hm 2 in 2014. Reed marsh, open water and mudflat, and wet meadows contributed to the expansion of poplar plantation, which accounted for 41.8%, 37.0% and 21.2%, respectively. Failure policy incentives, as well as the market need for economic interests were the key drivers of the popular plantation expansion, and meanwhile, operation of the Three Gorges Dam that lowered down the flooding water level, as well as the sediment deposition within the lake bed offered favorable environment for popular tree growth. The project of "returning forest to wetland" after 2013 was the main reason for the decreased poplar plantation area in 2014.

Thin-layer chromatographic identification of Chinese propolis using chemometric fingerprinting.

PubMed

Tang, Tie-xin; Guo, Wei-yan; Xu, Ye; Zhang, Si-ming; Xu, Xin-jun; Wang, Dong-mei; Zhao, Zhi-min; Zhu, Long-ping; Yang, De-po

2014-01-01

Poplar tree gum has a similar chemical composition and appearance to Chinese propolis (bee glue) and has been widely used as a counterfeit propolis because Chinese propolis is typically the poplar-type propolis, the chemical composition of which is determined mainly by the resin of poplar trees. The discrimination of Chinese propolis from poplar tree gum is a challenging task. To develop a rapid thin-layer chromatographic (TLC) identification method using chemometric fingerprinting to discriminate Chinese propolis from poplar tree gum. A new TLC method using a combination of ammonia and hydrogen peroxide vapours as the visualisation reagent was developed to characterise the chemical profile of Chinese propolis. Three separate people performed TLC on eight Chinese propolis samples and three poplar tree gum samples of varying origins. Five chemometric methods, including similarity analysis, hierarchical clustering, k-means clustering, neural network and support vector machine, were compared for use in classifying the samples based on their densitograms obtained from the TLC chromatograms via image analysis. Hierarchical clustering, neural network and support vector machine analyses achieved a correct classification rate of 100% in classifying the samples. A strategy for TLC identification of Chinese propolis using chemometric fingerprinting was proposed and it provided accurate sample classification. The study has shown that the TLC identification method using chemometric fingerprinting is a rapid, low-cost method for the discrimination of Chinese propolis from poplar tree gum and may be used for the quality control of Chinese propolis. Copyright © 2014 John Wiley & Sons, Ltd.

Bedrock geologic map of the Spring Valley, West Plains, and parts of the Piedmont and Poplar Bluff 30'x60' quadrangles, Missouri, including the upper Current River and Eleven Point River drainage basins

USGS Publications Warehouse

Weary, David J.; Harrison, Richard W.; Orndorff, Randall C.; Weems, Robert E.; Schindler, J. Stephen; Repetski, John E.; Pierce, Herbert A.

2015-01-01

Potentially economic mineral resources are present in the subsurface in the map area. Exploration drill-hole data indicate that anomalously high concentrations of base-metal sulfides locally occur within the Cambrian Bonneterre Formation. The geologic setting of these anomalous concentrations is similar to that found in the Viburnum Trend, part of the largest lead-mining district in the world. The southernmost part of the Viburnum Trend extends into the northern part of the map area and is exploited by the Sweetwater Mine. Undeveloped and potentially economic occurrences of base metals are known also beneath Blair Creek, a tributary to the Current River in the north-central part of the map area.

Land use and wind direction drive hybridization between cultivated poplar and native species in a Mediterranean floodplain environment.

PubMed

Paffetti, Donatella; Travaglini, Davide; Labriola, Mariaceleste; Buonamici, Anna; Bottalico, Francesca; Materassi, Alessandro; Fasano, Gianni; Nocentini, Susanna; Vettori, Cristina

2018-01-01

Deforestation and intensive land use management with plantations of fast-growing tree species, like Populus spp., may endanger native trees not only by eliminating or reducing their habitats, but also by diminishing their species integrity via hybridization and introgression. The genus Populus has persistent natural hybrids because clonal and sexual reproduction is common. The objective of this study was to assess the effect of land use management of poplar plantations on the spatial genetic structure and species composition in poplar stands. Specifically, we studied the potential breeding between natural and cultivated poplar populations in the Mediterranean environment to gain insight into spontaneous hybridization events between exotic and native poplars; we also used a GIS-based model to evaluate the potential threats related to an intensive land use management. Two study areas, both near to poplar plantations (P.×euramericana), were designated in the native mixed stands of P. alba, P. nigra and P.×canescens within protected areas. We found that the spatial genetic structure differed between the two stands and their differences depended on their environmental features. We detected a hybridization event with P.×canescens that was made possible by the synchrony of flowering between the poplar plantation and P.×canescens and facilitated by the wind intensity and direction favoring the spread of pollen. Taken together, our results indicate that natural and artificial barriers are crucial to mitigate the threats, and so they should be explicitly considered in land use planning. For example, our results suggest the importance of conserving rows of trees and shrubs along rivers and in agricultural landscapes. In sum, it is necessary to understand, evaluate, and monitor the spread of exotic species and genetic material to ensure effective land use management and mitigation of their impact on native tree populations. Copyright © 2017 Elsevier B.V. All rights reserved.

Yield physiology of short rotation intensively cultured poplars

Treesearch

J. G. Isebrands; N. D. Nelson; D. I. Dickmann; D. A. Michael

1983-01-01

An integrated research approach is described for studying yield physiology of short rotation intensively cultured (SRIC) poplar plantations. Branch architecture differs with clone and stand density, but the clonal ranking of important branch characteristics does not change with spacing.

Successful crossings with early flowering transgenic poplar: interspecific crossings, but not transgenesis, promoted aberrant phenotypes in offspring.

PubMed

Hoenicka, Hans; Lehnhardt, Denise; Nilsson, Ove; Hanelt, Dieter; Fladung, Matthias

2014-10-01

In forest tree species, the reproductive phase is reached only after many years or even decades of juvenile growth. Different early flowering systems based on the genetic transfer of heat-shock promoter driven flowering-time genes have been proposed for poplar; however, no fertile flowers were reported until now. Here, we studied flower and pollen development in both HSP::AtFT and wild-type male poplar in detail and developed an optimized heat treatment protocol to obtain fertile HSP::AtFT flowers. Anthers from HSP::AtFT poplar flowers containing fertile pollen grains showed arrested development in stage 12 instead of reaching phase 13 as do wild-type flowers. Pollen grains could be isolated under the binocular microscope and were used for intra- and interspecific crossings with wild-type poplar. F1-seedlings segregating the HSP::AtFT gene construct according to Mendelian laws were obtained. A comparison between intra- and interspecific crossings revealed that genetic transformation had no detrimental effects on F1-seedlings. However, interspecific crossings, a broadly accepted breeding method, produced 47% seedlings with an aberrant phenotype. The early flowering system presented in this study opens new possibilities for accelerating breeding of poplar and other forest tree species. Fast breeding and the selection of transgene-free plants, once the breeding process is concluded, can represent an attractive alternative even under very restrictive regulations. © 2014 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Use of remote sensing for land use policy formulation

NASA Technical Reports Server (NTRS)

1982-01-01

Research projects described include: (1) identifying coniferous forest types in Michigan using LANDSAT imagery; (2) investigating synoptic temperature patterns in Michigan as determined via GOES and HCMM thermal imagery; (3) land surface change detection using satellite data and a geographic data base; (4) determining soil map unit composition by electronic scanning densitometry; and (5) delimiting areas of virus infection in vineyards and blueberry fields in southwestern and western Michigan. Contractual activities involve important farmlands inventory, changes in aquatic vegetation in Saginaw Bay, digitized soil association map of Michigan, and aerial photography for hybrid-poplar research. On-going projects are also being conducted in Jamaica, Honduras, the Dominican Republic and Kenya.

Progress in developing disease control strategies for hybrid poplars

Treesearch

Michael E. Ostry

2000-01-01

Hybrid poplars are being grown throughout many regions of the world for purposes including the production of fiber and energy, ornamental landscape plantings, and soil stabilization. Disease has often been responsible for planting failures resulting in poplars being labeled the universal host to many damaging pathogens. However, many of the poplar species and their...

21st Session of the International Poplar Commission (IPC-2000): poplar and willow culture: meeting the needs of society and the environment; 200 September 24-28; Vancouver, WA.

Treesearch

J.G. Isebrands; J. Richardson

2000-01-01

Research results and ongoing research activities on poplar and willow breeding, diseases, insects, production, and utilization are described in 220 abstracts from the International Poplar Commission meeting in Vancouver, Washington, September 24-28, 2000.

Ecology and silviculture of poplar plantations

Treesearch

John A. Stanturf; Cees van Oosten; Daniel A. Netzer; Mark D. Coleman; C. Jeffrey Portwood

2002-01-01

Poplars are some of the fastest growing trees in North America and foresters have sought to capitalize on this potential since the 1940s. Interest in growing poplars has fluctuated, and objectives have shifted between producing sawlogs, pulp-wood, or more densely spaced "woodgrass" or biofuels. Currently, most poplar plantations are established for pulpwood...

Poplar FT2 Shortens the Juvenile Phase and Promotes Seasonal Flowering[W

PubMed Central

Hsu, Chuan-Yu; Liu, Yunxia; Luthe, Dawn S.; Yuceer, Cetin

2006-01-01

Many woody perennials, such as poplar (Populus deltoides), are not able to form flower buds during the first several years of their life cycle. They must undergo a transition from the juvenile phase to the reproductive phase to be competent to produce flower buds. After this transition, trees begin to form flower buds in the spring of each growing season. The genetic factors that control flower initiation, ending the juvenile phase, are unknown in poplar. The factors that regulate seasonal flower bud formation are also unknown. Here, we report that poplar FLOWERING LOCUS T2 (FT2), a relative of the Arabidopsis thaliana flowering-time gene FT, controls first-time and seasonal flowering in poplar. The FT2 transcript is rare during the juvenile phase of poplar. When juvenile poplar is transformed with FT2 and transcript levels are increased, flowering is induced within 1 year. During the transition between vegetative and reproductive growth in mature trees, FT2 transcripts are abundant during reproductive growth under long days. Subsequently, floral meristems emerge on flanks of the axillary inflorescence shoots. These findings suggest that FT2 is part of the flower initiation pathway in poplar and plays an additional role in regulating seasonal flower initiation that is integrated with the poplar perennial growth habit. PMID:16844908

Long-term response of yellow-poplar to thinning in the Southern Appalachian Mountains

Treesearch

Tara L. Keyser; Peter M. Brown

2015-01-01

Yellow-poplar (Liriodendron tulipifera L.) is the most abundant individual tree species (in terms of volume) in the southern Appalachian Mountains, with Forest Inventory and Analysis (FIA) reports documenting a continuous increase in yellow-poplar over the recent years (Brown 2003, Schweitzer 1999, Thompson 1998). Current management efforts in evenaged yellow-poplar...

Environmental benefits of poplar culture

Treesearch

J. G. Isebrands; D.F. Karnosky.

2001-01-01

Poplars have important values above and beyond wood or fiber production. Poplars have been planted for environmental purposes for centuries. There are reports of poplar plantings dating back to early Chinese history and biblical times in the Middle East, When immigrants came to North America in the 18th and 19th century, they often brought cuttings of their favorite...

Decay in yellow-poplar, maple, black gum, and ash in the central hardwood region

Treesearch

Frederick H. Berry

1977-01-01

In a study of decay in yellow-poplar (Liriodendron tulipifera L.), red maple (Acer rubrum L.), sugar maple (Acer saccharum Marsh.), black gum (Nyssa sylvatica Marsh.), and ash (Fraxinus spp.) in the central hardwood region, decay was found in 57 of 148 study trees. Extent of...

Production of Hybrid Poplar under Short-Term, Intensive Culture in Western Colorado

USDA-ARS?s Scientific Manuscript database

An irrigated study was conducted at the Western Colorado Research Center at Fruita for 6 yr to evaluate eight hybrid poplar clones under short-term, intensive culture. The eight clones included in the study were Populus nigra x P. maximowiczii (NM6), P. trichocarpa x P. deltoides (52225, OP367), and...

Chloroplast parameters differ in wild type and transgenic poplars overexpressing gsh1 in the cytosol.

PubMed

Ivanova, L A; Ronzhina, D A; Ivanov, L A; Stroukova, L V; Peuke, A D; Rennenberg, H

2009-07-01

Poplar mutants overexpressing the bacterial genes gsh1 or gsh2 encoding the enzymes of glutathione biosynthesis are among the best-characterised transgenic plants. However, this characterisation originates exclusively from laboratory studies, and the performance of these mutants under field conditions is largely unknown. Here, we report a field experiment in which the wild-type poplar hybrid Populus tremula x P. alba and a transgenic line overexpressing the bacterial gene gsh1 encoding gamma-glutamylcysteine synthetase in the cytosol were grown for 3 years at a relatively clean (control) field site and a field site contaminated with heavy metals. Aboveground biomass accumulation was slightly smaller in transgenic compared to wild-type plants; soil contamination significantly decreased biomass accumulation in both wild-type and transgenic plants by more than 40%. Chloroplasts parameters, i.e., maximal diameter, projection area and perimeter, surface area and volume, surface/volume ratio and a two-dimensional form coefficient, were found to depend on plant type, leaf tissue and soil contamination. The greatest differences between wild and transgenic poplars were observed at the control site. Under these conditions, chloroplast sizes in palisade tissue of transgenic poplar significantly exceeded those of the wild type. In contrast to the wild type, palisade chloroplast volume exceeded that of spongy chloroplasts in transgenic poplars at both field sites. Chlorophyll content per chloroplast was the same in wild and transgenic poplars. Apparently, the increase in chloroplast volume was not connected to changes in the photosynthetic centres. Chloroplasts of transgenic poplar at the control site were more elongated in palisade cells and close to spherical in spongy mesophyll chloroplasts. At the contaminated site, palisade and spongy cell chloroplasts of leaves from transgenic trees and the wild type were the same shape. Transgenic poplars also had a smaller chloroplast surface/volume ratio, both at the control and the contaminated site. Chloroplast number per cell did not differ between wild and transgenic poplars at the control site. Soil contamination led to suppression of chloroplast replication in wild-type plants. From these results, we assume that overexpressing the bacterial gsh1 gene in the cytosol interacts with processes in the chloroplast and that sequestration of heavy metal phytochelatin complexes into the vacuole may partially counteract this interaction in plants grown at heavy metal-contaminated field sites. Further experiments are required to test these assumptions.

The WRKY transcription factors PtrWRKY18 and PtrWRKY35 promote Melampsora resistance in Populus.

PubMed

Jiang, Yuanzhong; Guo, Li; Ma, Xiaodong; Zhao, Xin; Jiao, Bo; Li, Chaofeng; Luo, Keming

2017-05-01

WRKY transcription factors play important roles in response to diverse environmental stresses, but exact functions of these proteins in poplar defense are still largely unknown. In a previous study, we have shown that poplar WRKY89 is induced by salicylic acid (SA) treatment and plays an important role in resistance against fungi in transgenic poplars. Here, we determined an increase in transcript levels of Group IIa WRKY members in transgenic poplars overexpressing WRKY89 using quantitative real-time polymerase chain reaction analysis. Yeast one-hybrid assay showed that PtrWRKY18 and PtrWRKY35 were potential target genes of WRKY89. Furthermore, we demonstrated that PtrWRKY18 and PtrWRKY35 were localized in the nucleus, and exhibited no transcription activation activity. Constitutive overexpression of PtrWRKY18 and PtrWRKY35 in poplars activated pathogenesis-related genes, and increased resistance to the biotrophic pathogen Melampsora. The results also provided support for the involvement of SA-mediated signaling in Melampsora resistance. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Phytoremediation with transgenic trees.

PubMed

Peuke, Andreas D; Rennenberg, Heinz

2005-01-01

In the present paper actual trends in the use of transgenic trees for phytoremediation of contaminated soils are reviewed. In this context a current field trial in which transgenic poplars with enhanced GSH synthesis and hence elevated capacity for phytochelatin production are compared with wildtype plants for the removal of heavy metals at different levels of contamination and under different climatic conditions. The studies are carried out with grey poplar (Populus tremula x P. alba), wildtype plants and plants overexpressing the gene for gamma-glutamylcysteine synthetase (gshI) from E. coli in the cytosol. The expression of this gene in poplar leads to two- to four-fold enhanced GSH concentrations in the leaves. In greenhouse experiments under controlled conditions these transgenic poplars showed a high potential for uptake and detoxification of heavy metals and pesticides. This capacity is evaluated in field experiments. Further aims of the project are to elucidate (a) the stability of the transgene under field conditions and (b) the possibility of horizontal gene transfer to microorganisms in the rhizosphere. The results will help to assess the biosafety risk of the use of transgenic poplar for phytoremediation of soils.

Cadmium accumulation and growth responses of a poplar (Populus deltoidsxPopulus nigra) in cadmium contaminated purple soil and alluvial soil.

PubMed

Wu, Fuzhong; Yang, Wanqin; Zhang, Jian; Zhou, Liqiang

2010-05-15

To characterize the phytoextraction efficiency of a hybrid poplar (Populus deltoidsxPopulus nigra) in cadmium contaminated purple soil and alluvial soil, a pot experiment in field was carried out in Sichuan basin, western China. After one growing period, the poplar accumulated the highest of 541.98+/-19.22 and 576.75+/-40.55 microg cadmium per plant with 110.77+/-12.68 and 202.54+/-19.12 g dry mass in these contaminated purple soil and alluvial soil, respectively. Higher phytoextraction efficiency with higher cadmium concentration in tissues was observed in poplar growing in purple soil than that in alluvial soil at relative lower soil cadmium concentration. The poplar growing in alluvial soil had relative higher tolerance ability with lower reduction rates of morphological and growth characters than that in purple soil, suggesting that the poplar growing in alluvial soil might display the higher phytoextraction ability when cadmium contamination level increased. Even so, the poplars exhibited obvious cadmium transport from root to shoot in both soils regardless of cadmium contamination levels. It implies that this examined poplar can extract more cadmium than some hyperaccumulators. The results indicated that metal phytoextraction using the poplar can be applied to clean up soils moderately contaminated by cadmium in these purple soil and alluvial soil. Copyright (c) 2009 Elsevier B.V. All rights reserved.

Genome Survey and Characterization of Endophytic Bacteria Exhibiting a Beneficial Effect on Growth and Development of Poplar Trees ▿ †

PubMed Central

Taghavi, Safiyh; Garafola, Craig; Monchy, Sébastien; Newman, Lee; Hoffman, Adam; Weyens, Nele; Barac, Tanja; Vangronsveld, Jaco; van der Lelie, Daniel

2009-01-01

The association of endophytic bacteria with their plant hosts has a beneficial effect for many different plant species. Our goal is to identify endophytic bacteria that improve the biomass production and the carbon sequestration potential of poplar trees (Populus spp.) when grown in marginal soil and to gain an insight in the mechanisms underlying plant growth promotion. Members of the Gammaproteobacteria dominated a collection of 78 bacterial endophytes isolated from poplar and willow trees. As representatives for the dominant genera of endophytic gammaproteobacteria, we selected Enterobacter sp. strain 638, Stenotrophomonas maltophilia R551-3, Pseudomonas putida W619, and Serratia proteamaculans 568 for genome sequencing and analysis of their plant growth-promoting effects, including root development. Derivatives of these endophytes, labeled with gfp, were also used to study the colonization of their poplar hosts. In greenhouse studies, poplar cuttings (Populus deltoides × Populus nigra DN-34) inoculated with Enterobacter sp. strain 638 repeatedly showed the highest increase in biomass production compared to cuttings of noninoculated control plants. Sequence data combined with the analysis of their metabolic properties resulted in the identification of many putative mechanisms, including carbon source utilization, that help these endophytes to thrive within a plant environment and to potentially affect the growth and development of their plant hosts. Understanding the interactions between endophytic bacteria and their host plants should ultimately result in the design of strategies for improved poplar biomass production on marginal soils as a feedstock for biofuels. PMID:19060168

Mammalian cytochrome CYP2E1 triggered differential gene regulation in response to trichloroethylene (TCE) in a transgenic poplar.

PubMed

Kang, Jun Won; Wilkerson, Hui-Wen; Farin, Federico M; Bammler, Theo K; Beyer, Richard P; Strand, Stuart E; Doty, Sharon L

2010-08-01

Trichloroethylene (TCE) is an important environmental contaminant of soil, groundwater, and air. Studies of the metabolism of TCE by poplar trees suggest that cytochrome P450 enzymes are involved. Using poplar genome microarrays, we report a number of putative genes that are differentially expressed in response to TCE. In a previous study, transgenic hybrid poplar plants expressing mammalian cytochrome P450 2E1 (CYP2E1) had increased metabolism of TCE. In the vector control plants for this construct, 24 h following TCE exposure, 517 genes were upregulated and 650 genes were downregulated over 2-fold when compared with the non-exposed vector control plants. However, in the transgenic CYP2E1 plant, line 78, 1,601 genes were upregulated and 1,705 genes were downregulated over 2-fold when compared with the non-exposed transgenic CYP2E1 plant. It appeared that the CYP2E1 transgenic hybrid poplar plants overexpressing mammalian CYP2E1 showed a larger number of differentially expressed transcripts, suggesting a metabolic pathway for TCE to metabolites had been initiated by activity of CYP2E1 on TCE. These results suggest that either the over-expression of the CYP2E1 gene or the abundance of TCE metabolites from CYP450 2E1 activity triggered a strong genetic response to TCE. Particularly, cytochrome p450s, glutathione S-transferases, glucosyltransferases, and ABC transporters in the CYP2E1 transgenic hybrid poplar plants were highly expressed compared with in vector controls.

The salinity tolerant poplar database (STPD): a comprehensive database for studying tree salt-tolerant adaption and poplar genomics.

PubMed

Ma, Yazhen; Xu, Ting; Wan, Dongshi; Ma, Tao; Shi, Sheng; Liu, Jianquan; Hu, Quanjun

2015-03-17

Soil salinity is a significant factor that impairs plant growth and agricultural productivity, and numerous efforts are underway to enhance salt tolerance of economically important plants. Populus species are widely cultivated for diverse uses. Especially, they grow in different habitats, from salty soil to mesophytic environment, and are therefore used as a model genus for elucidating physiological and molecular mechanisms of stress tolerance in woody plants. The Salinity Tolerant Poplar Database (STPD) is an integrative database for salt-tolerant poplar genome biology. Currently the STPD contains Populus euphratica genome and its related genetic resources. P. euphratica, with a preference of the salty habitats, has become a valuable genetic resource for the exploitation of tolerance characteristics in trees. This database contains curated data including genomic sequence, genes and gene functional information, non-coding RNA sequences, transposable elements, simple sequence repeats and single nucleotide polymorphisms information of P. euphratica, gene expression data between P. euphratica and Populus tomentosa, and whole-genome alignments between Populus trichocarpa, P. euphratica and Salix suchowensis. The STPD provides useful searching and data mining tools, including GBrowse genome browser, BLAST servers and genome alignments viewer, which can be used to browse genome regions, identify similar sequences and visualize genome alignments. Datasets within the STPD can also be downloaded to perform local searches. A new Salinity Tolerant Poplar Database has been developed to assist studies of salt tolerance in trees and poplar genomics. The database will be continuously updated to incorporate new genome-wide data of related poplar species. This database will serve as an infrastructure for researches on the molecular function of genes, comparative genomics, and evolution in closely related species as well as promote advances in molecular breeding within Populus. The STPD can be accessed at http://me.lzu.edu.cn/stpd/ .

Sulphur flux through the sulphate assimilation pathway is differently controlled by adenosine 5'-phosphosulphate reductase under stress and in transgenic poplar plants overexpressing gamma-ECS, SO, or APR.

PubMed

Scheerer, Ursula; Haensch, Robert; Mendel, Ralf R; Kopriva, Stanislav; Rennenberg, Heinz; Herschbach, Cornelia

2010-01-01

Sulphate assimilation provides reduced sulphur for the synthesis of cysteine, methionine, and numerous other essential metabolites and secondary compounds. The key step in the pathway is the reduction of activated sulphate, adenosine 5'-phosphosulphate (APS), to sulphite catalysed by APS reductase (APR). In the present study, [(35)S]sulphur flux from external sulphate into glutathione (GSH) and proteins was analysed to check whether APR controls the flux through the sulphate assimilation pathway in poplar roots under some stress conditions and in transgenic poplars. (i) O-Acetylserine (OAS) induced APR activity and the sulphur flux into GSH. (ii) The herbicide Acetochlor induced APR activity and results in a decline of GSH. Thereby the sulphur flux into GSH or protein remained unaffected. (iii) Cd treatment increased APR activity without any changes in sulphur flux but lowered sulphate uptake. Several transgenic poplar plants that were manipulated in sulphur metabolism were also analysed. (i) Transgenic poplar plants that overexpressed the gamma-glutamylcysteine synthetase (gamma-ECS) gene, the enzyme catalysing the key step in GSH formation, showed an increase in sulphur flux into GSH and sulphate uptake when gamma-ECS was targeted to the cytosol, while no changes in sulphur flux were observed when gamma-ECS was targeted to plastids. (ii) No effect on sulphur flux was observed when the sulphite oxidase (SO) gene from Arabidopsis thaliana, which catalyses the back reaction of APR, that is the reaction from sulphite to sulphate, was overexpressed. (iii) When Lemna minor APR was overexpressed in poplar, APR activity increased as expected, but no changes in sulphur flux were observed. For all of these experiments the flux control coefficient for APR was calculated. APR as a controlling step in sulphate assimilation seems obvious under OAS treatment, in gamma-ECS and SO overexpressing poplars. A possible loss of control under certain conditions, that is Cd treatment, Acetochlor treatment, and in APR overexpressing poplar, is discussed.

Efficient Agrobacterium-Mediated Transformation of Hybrid Poplar Populus davidiana Dode × Populus bollena Lauche

PubMed Central

Han, Xue; Ma, Shurong; Kong, Xianghui; Takano, Tetsuo; Liu, Shenkui

2013-01-01

Poplar is a model organism for high in vitro regeneration in woody plants. We have chosen a hybrid poplar Populus davidiana Dode × Populus bollena Lauche. By optimizing the Murashige and Skoog medium with (0.3 mg/L) 6-benzylaminopurine and (0.08 mg/L) naphthaleneacetic acid, we have achieved the highest frequency (90%) for shoot regeneration from poplar leaves. It was also important to improve the transformation efficiency of poplar for genetic breeding and other applications. In this study, we found a significant improvement of the transformation frequency by controlling the leaf age. Transformation efficiency was enhanced by optimizing the Agrobacterium concentration (OD600 = 0.8–1.0) and an infection time (20–30 min). According to transmission electron microscopy observations, there were more Agrobacterium invasions in the 30-day-old leaf explants than in 60-day-old and 90-day-old explants. Using the green fluorescent protein (GFP) marker, the expression of MD–GFP fusion proteins in the leaf, shoot, and root of hybrid poplar P. davidiana Dode × P. bollena Lauche was visualized for confirmation of transgene integration. Southern and Northern blot analysis also showed the integration of T-DNA into the genome and gene expression of transgenic plants. Our results suggest that younger leaves had higher transformation efficiency (~30%) than older leaves (10%). PMID:23354481

Relationship of stump diameter to d. b. h. for yellow-poplar in the Northeast

Treesearch

Frederick E. Hampf

1955-01-01

This is the sixth report on a series of studies to show the relationship of stump diameter to diameter breast high (d. b. h.) for commercially important tree species in the Northeast. This report is for yellow-poplar (Lirodendron tulipifera).

Evaluation of Calendar Year 1997 Groundwater and Surface Water Quality Data For The Upper East Fork Poplar Creek Hydrogeologic Regime At The U.S. Department of Energy Y-12 Plant, Oak Ridge, Tennessee

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jones, S.B.

1998-09-01

1 1.0 INTRODUCTION This report presents an evaluation of the groundwater quality monitoring data reported in: Calendar Year 1997 Annual Groundwatw Monitoring Report for the Upper East Fork Poplar Creek Hydrogeologtc Rep-meat the US. Department of Energy Y-12 Plant, Oak Ridge, Tennessee (AJA Technical Services, Inc. 1998), which is hereafter referenced as the Annual Monitoring Report. Section 2.0 presents background information for the Upper East Fork Poplar Creek Hydrogeologic Regime (East Fork Regime) that is relevant to data evaluation, including brief descriptions of the geology, the groundwater flow system, the contaminant source areas, and the extent of groundwater contamination inmore » the regime. Section 3.0 provides an overview of the groundwater sampling and analysis activities petiormed during calendar year (CY) 1997, including monitoring well locations, sampling frequency and methods, and laboratory analyses. Evaluation and interpretation of the monitoring da% described in Section 4.0, is generally focused on an overview of data quality assurance/quality control (QA/QC), long-term concentration trends for selected inorganic, organic, and radiological contaminants, and consistency with applicable site-specific conceptual contaminant transport models described in: Report on the Remedial Investigation of the Upper East Fork Poplar Creek Characterization Area at the Oak Ridge Y-12 Plant, Oak Ridge, Tennessee (U.S. Department of Energy 1998), which is referenced hereafter as the Remedial Investigation @I) Report. Findings of the data evaluations are summarized :in Section 5.0 and a list of technical reports and regulatory documents cited for more detailed irdormation (Section 6.0) concludes the report. All of the illustrations (maps and trend graphs) and data summary tables referenced in the text are presented in Appendm A and Appendix B, respectively. Appendix C provides a summary of the analytical results that meet applicable data quality objectives (DQOS) of the Y-12 Plant Groundwater Protection Program.« less

Transcript and metabolite profiling for the evaluation of tobacco tree and poplar as feedstock for the bio-based industry.

PubMed

Ruprecht, Colin; Tohge, Takayuki; Fernie, Alisdair; Mortimer, Cara L; Kozlo, Amanda; Fraser, Paul D; Funke, Norma; Cesarino, Igor; Vanholme, Ruben; Boerjan, Wout; Morreel, Kris; Burgert, Ingo; Gierlinger, Notburga; Bulone, Vincent; Schneider, Vera; Stockero, Andrea; Navarro-Aviñó, Juan; Pudel, Frank; Tambuyser, Bart; Hygate, James; Bumstead, Jon; Notley, Louis; Persson, Staffan

2014-05-16

The global demand for food, feed, energy and water poses extraordinary challenges for future generations. It is evident that robust platforms for the exploration of renewable resources are necessary to overcome these challenges. Within the multinational framework MultiBioPro we are developing biorefinery pipelines to maximize the use of plant biomass. More specifically, we use poplar and tobacco tree (Nicotiana glauca) as target crop species for improving saccharification, isoprenoid, long chain hydrocarbon contents, fiber quality, and suberin and lignin contents. The methods used to obtain these outputs include GC-MS, LC-MS and RNA sequencing platforms. The metabolite pipelines are well established tools to generate these types of data, but also have the limitations in that only well characterized metabolites can be used. The deep sequencing will allow us to include all transcripts present during the developmental stages of the tobacco tree leaf, but has to be mapped back to the sequence of Nicotiana tabacum. With these set-ups, we aim at a basic understanding for underlying processes and at establishing an industrial framework to exploit the outcomes. In a more long term perspective, we believe that data generated here will provide means for a sustainable biorefinery process using poplar and tobacco tree as raw material. To date the basal level of metabolites in the samples have been analyzed and the protocols utilized are provided in this article.

Daytime and nighttime wind differentially affects hydraulic properties and thigmomorphogenic response of poplar saplings.

PubMed

Huang, Ping; Wan, Xianchong; Lieffers, Victor J

2016-05-01

This study tested how wind in daytime and nighttime affects hydraulic properties and thigmomorphogenic response of poplar saplings. It shows that wind in daytime interrupted water balance of poplar plants by aggravating cavitation in the stem xylem under high xylem tension in the daytime, reducing water potential in midday and hence reducing gas exchange, including stomatal conductance and CO2 assimilation. The wind blowing in daytime significantly reduced plant growth, including height, diameter, leaf size, leaf area, root and whole biomass, whereas wind blowing in nighttime only caused a reduction in radial and height growth at the early stage compared with the control but decreased height:diameter ratios. In summary, the interaction between wind loading and xylem tension exerted a negative impact on water balance, gas exchanges and growth of poplar plants, and wind in nighttime caused only a small thigmomorphogenic response. © 2015 Scandinavian Plant Physiology Society.

Gaseous NO2 effects on stomatal behavior, photosynthesis and respiration of hybrid poplar leaves

USDA-ARS?s Scientific Manuscript database

In this study, we used poplar as a model plant and investigated the effects of gaseous nitrogen dioxide (NO2, 4 microliter per liter) on stomatal conductance, photosynthesis, dark- and photorespiration of Populus alba x Populus berolinensis hybrid leaves using the photosynthesis system and scanning...

Oxygenase-Catalyzed Biodegradation of Emerging Water Contaminants: 1,4-Dioxane and N-Nitrosodimethylamine

DTIC Science & Technology

2012-02-01

and treat operations (54, 144). Aitchison et al. (1) have reported phytoremediation of dioxane by hybrid poplar trees. In their laboratory studies... Phytoremediation of 1,4-dioxane by hybrid poplar trees. Water Environ. Res. 72:313-321. 2. Alber, B. E. 2011. Biotechnological potential of the

Transgenic manipulation of the metabolism of polyamines in poplar cells

Treesearch

Pratiksha Bhatnagar; Bernadette M. Glasheen; Suneet K. Bains; Stephanie L. Long; Rakesh Minocha; Christian Walter; Subhash C. Minocha

2001-01-01

The metabolism of polyamines (putrescine, spermidine, and spermine) has become the target of genetic manipulation because of their significance in plant development and possibly stress tolerance. We studied the polyamine metabolism in non-transgenic (NT) and transgenic cells of poplar (Populus nigra 3 maximowiczii) expressing a...

Analysis of genetic and environmental effects on hybrid poplar rooting in Central and Northern Minnesota, USA

Treesearch

Ronald S., Jr. Zalesny; Don Riemenschneider; Edmund Bauer

2000-01-01

We studied genetic and environmental effects on adventitious root initiation and growth because rooting is biologically prerequisite to the establishment of hybrid poplar plantations. Six clones from two pedigrees (pure Populus deltoides "cottonwoods" and P. deltoides x P. maximowiczii hybrids) were...

Carbon budget and its response to environmental factors in young and mature poplar plantations along the middle and lower reaches of the Yangtze River, China

Treesearch

Jinxing Zhou; Yuan Wei; Jun Yang; Xiaohui Yang; Zeping Jiang; Jiquan Chen; Asko Noormets; Xiaosong Zhao

2012-01-01

Although poplar forest is the dominant plantation type in China, there is uncertainty about the carbon budget of these forests across the country. The observations, performed in 2006, of two eddy covariance flux towers on a young poplar plantation (Yueyang, Hunan province) and a mature poplar plantation (Huaining, Anhui province) provide an opportunity to understand...

Poplar response to cadmium and lead soil contamination.

PubMed

Radojčić Redovniković, Ivana; De Marco, Alessandra; Proietti, Chiara; Hanousek, Karla; Sedak, Marija; Bilandžić, Nina; Jakovljević, Tamara

2017-10-01

An outdoor pot experiment was designed to study the potential of poplar (Populus nigra 'Italica') in phytoremediation of cadmium (Cd) and lead (Pb). Poplar was treated with a combination of different concentrations of Cd (w = 10, 25, 50mgkg -1 soil) and Pb (400, 800, 1200mgkg -1 soil) and several physiological and biochemical parameters were monitored including the accumulation and distribution of metals in different plant parts (leaf, stem, root). Simultaneously, the changes in the antioxidant system in roots and leaves were monitored to be able to follow synergistic effects of both heavy metals. Moreover, a statistical analysis based on the Random Forests Analysis (RFA) was performed in order to determine the most important predictors affecting growth and antioxidative machinery activities of poplar under heavy metal stress. The study demonstrated that tested poplar could be a good candidate for phytoextraction processes of Cd in moderately contaminated soils, while in heavily contaminated soil it could be only considered as a phytostabilisator. For Pb remediation only phytostabilisation process could be considered. By using RFA we pointed out that it is important to conduct the experiments in an outdoor space and include environmental conditions in order to study more realistic changes of growth parameters and accumulation and distribution of heavy metals. Also, to be able to better understand the interactions among previously mentioned parameters, it is important to conduct the experiments during prolonged time exposure., This is especially important for the long life cycle woody species. Copyright © 2017. Published by Elsevier Inc.

Comparative Proteomic Analysis of Mature Pollen in Triploid and Diploid Populus deltoides

PubMed Central

Zhang, Xiao-Ling; Zhang, Jin; Guo, Ying-Hua; Sun, Pei; Jia, Hui-Xia; Fan, Wei; Lu, Meng-Zhu; Hu, Jian-Jun

2016-01-01

Ploidy affects plant growth vigor and cell size, but the relative effects of pollen fertility and allergenicity between triploid and diploid have not been systematically examined. Here we performed comparative analyses of fertility, proteome, and abundances of putative allergenic proteins of pollen in triploid poplar ‘ZhongHuai1’ (‘ZH1’, triploid) and ‘ZhongHuai2’ (‘ZH2’, diploid) generated from the same parents. The mature pollen was sterile in triploid poplar ‘ZH1’. By applying two-dimensional gel electrophoresis (2-DE), a total of 72 differentially expressed protein spots (DEPs) were detected in triploid poplar pollen. Among them, 24 upregulated and 43 downregulated proteins were identified in triploid poplar pollen using matrix-assisted laser desorption/ionisation coupled with time of-flight tandem mass spectrometer analysis (MALDI-TOF/TOF MS/MS). The main functions of these DEPs were related with “S-adenosylmethionine metabolism”, “actin cytoskeleton organization”, or “translational elongation”. The infertility of triploid poplar pollen might be related to its abnormal cytoskeletal system. In addition, the abundances of previously identified 28 putative allergenic proteins were compared among three poplar varieties (‘ZH1’, ‘ZH2’, and ‘2KEN8‘). Most putative allergenic proteins were downregulated in triploid poplar pollen. This work provides an insight into understanding the protein regulation mechanism of pollen infertility and low allergenicity in triploid poplar, and gives a clue to improving poplar polyploidy breeding and decreasing the pollen allergenicity. PMID:27598155

[Distribution characteristics of soil organic carbon of burned area under different restorations.

PubMed

Li, Hong Yun; Xin, Ying; Zhao, Yu Sen

2016-09-01

The distribution characteristics of soil organic carbon (SOC), soil dissolved organic carbon (DOC) and soil microbial biomass carbon (MBC) under different restorations were studied in Larix gmelinii plantation, Pinus sylvestris var. mongolica plantation, artificial promotion poplar-birch forest and the natural secondary poplar-birch forest restored from burned area after the severe fire of Greater Xing' an Mountains in 1987. The results showed that the variations in SOC, DOC and MBC ranged from 9.63 to 79.72 g·kg -1 , from 33.21 to 186.30 mg·kg -1 and from 200.85 to 1755.63 mg·kg -1 , respectively, which decreased with soil depth increasing. There was significant diffe-rence in SOC, DOC and MBC among different restorations, with the maximum carbon contents for artificial promotion poplar-birch forest, followed by L. gmelinii plantation, natural secondary poplar-birch forest and P. sylvestris var. mongolica plantation successively. The soil microbial quotient va-ried from 1.1% under P. sylvestris var. mongolica plantation to 2.3% under artificial promotion poplar-birch forest, and its vertical distributions were different in the four restoration forests. Correlation analysis indicated that MBC had a significant positive correlation with SOC and DOC, respectively. The activity of soil organic carbon in artificial promotion poplar-birch forest was higher than in other forest stands, suggesting a stronger capacity of the soil carbon cycle through natural regeneration with artificial promotion on burned area in Greater Xing'an Mountains.

Enhancement of Biogas Yield of Poplar Leaf by High-Solid Codigestion with Swine Manure.

PubMed

Wangliang, Li; Zhikai, Zhang; Guangwen, Xu

2016-05-01

The aim of this work was to examine the improvement of anaerobic biodegradability of organic fractions of poplar leaf from codigestion with swine manure (SM), thus biogas yield and energy recovery. When poplar leaf was used as a sole substrate, the cumulative biogas yield was low, about 163 mL (g volatile solid (VS))(-1) after 45 days of digestion with a substrate/inoculum ratio of 2.5 and a total solid (TS) of 22 %. Under the same condition, the cumulative biogas yield of poplar leaf reached 321 mL (g VS)(-1) when SM/poplar leaf ratio was 2:5 (based on VS). The SM/poplar leaf ratio can determine C/N ratio of the cosubstrate and thus has significant influence on biogas yield. When the SM/poplar leaf ratio was 2:5, C/N ratio was calculated to be 27.02, and the biogas yield in 45 days of digestion was the highest. The semi-continuous digestion of poplar leaf was carried out with the organic loading rate of 1.25 and 1.88 g VS day(-1). The average daily biogas yield was 230.2 mL (g VS)(-1) and 208.4 mL (g VS)(-1). The composition analysis revealed that cellulose and hemicellulose contributed to the biogas production.

Growth of five hybrid poplar genotypes exposed to interacting elevated CO2 and O3

Treesearch

R.E. Dickson; M.D. Coleman; D.E. Riemenschneider; J.G. Isebrands; G.D. Hogan; D.F. Karnosky

1998-01-01

A wide variety of hybrid poplar clones are being introduced for intensive culture biomass production, but the potential clonal or genotypic response to increasing tropospheric carbon dioxide (CO2), ozone (O3), and their interactions are unknown. To study these effects, we exposed five different hybrid Populus...

Evaluation of cement-excelsior boards made from yellow-poplar and sweetgum

Treesearch

Andy W.C. Lee; Chung Y Hse

1993-01-01

Previous research conducted in the laboratory pointed out several hardwood species which were either superior, comparable, marginal, or unsuitable for manufacturing cement-excelsior board (CEB). In this study, forty full-sized boards were manufactured in a commercial production facility with the following species: yellow-poplar, sweetgum, southern pine, and sweetgum/...

Heat transfer mechanisms in poplar wood undergoing torrefaction

NASA Astrophysics Data System (ADS)

Sule, Idris O.; Mahmud, Shohel; Dutta, Animesh; Tasnim, Syeda Humaira

2016-03-01

Torrefaction, a thermal treatment process of biomass, has been proved to improve biomass combustible properties. Torrefaction is defined as a thermochemical process in reduced oxygen condition and at temperature range from 200 to 300 °C for shorter residence time whereby energy yield is maximized, can be a bridging technology that can lead the conventional system (e.g. coal-fired plants) towards a sustainable energy system. In efforts to develop a commercial operable torrefaction reactor, the present study examines the minimum input condition at which biomass is torrefied and explores the heat transfer mechanisms during torrefaction in poplar wood samples. The heat transfer through the wood sample is numerically modeled and analyzed. Each poplar wood is torrefied at temperature of 250, 270, and 300 °C. The experimental study shows that the 270 °C-treatment can be deduced as the optimal input condition for torrefaction of poplar wood. A good understanding of heat transfer mechanisms can facilitate the upscaling and downscaling of torrefaction process equipment to fit the feedstock input criteria and can help to develop treatment input specifications that can maximize process efficiency.

Potential of genetically engineered hybrid poplar for pyrolytic production of bio-based phenolic compounds.

PubMed

Toraman, Hilal E; Vanholme, Ruben; Borén, Eleonora; Vanwonterghem, Yumi; Djokic, Marko R; Yildiz, Guray; Ronsse, Frederik; Prins, Wolter; Boerjan, Wout; Van Geem, Kevin M; Marin, Guy B

2016-05-01

Wild-type and two genetically engineered hybrid poplar lines were pyrolyzed in a micro-pyrolysis (Py-GC/MS) and a bench scale setup for fast and intermediate pyrolysis studies. Principal component analysis showed that the pyrolysis vapors obtained by micro-pyrolysis from wood of caffeic acid O-methyltransferase (COMT) and caffeoyl-CoA O-methyltransferase (CCoAOMT) down-regulated poplar trees differed significantly from the pyrolysis vapors obtained from non-transgenic control trees. Both fast micro-pyrolysis and intermediate pyrolysis of transgenic hybrid poplars showed that down-regulation of COMT can enhance the relative yield of guaiacyl lignin-derived products, while the relative yield of syringyl lignin-derived products was up to a factor 3 lower. This study indicates that lignin engineering via genetic modifications of genes involved in the phenylpropanoid and monolignol biosynthetic pathways can help to steer the pyrolytic production of guaiacyl and syringyl lignin-derived phenolic compounds such as guaiacol, 4-methylguaiacol, 4-ethylguaiacol, 4-vinylguaiacol, syringol, 4-vinylsyringol, and syringaldehyde present in the bio-oil. Copyright © 2016 Elsevier Ltd. All rights reserved.

Interaction between isoprene and ozone fluxes in a poplar plantation and its impact on air quality at the European level

NASA Astrophysics Data System (ADS)

Zenone, Terenzio; Hendriks, Carlijn; Brilli, Federico; Fransen, Erik; Gioli, Beniamio; Portillo-Estrada, Miguel; Schaap, Martijn; Ceulemans, Reinhart

2016-09-01

The emission of isoprene and other biogenic volatile organic compounds from vegetation plays an important role in tropospheric ozone (O3) formation. The potentially large expansion of isoprene emitting species (e.g., poplars) for bioenergy production might, therefore, impact tropospheric O3 formation. Using the eddy covariance technique we have simultaneously measured fluxes isoprene, O3 and of CO2 from a poplar (Populus) plantation grown for bioenergy production. We used the chemistry transport model LOTOS-EUROS to scale-up the isoprene emissions associated with the existing poplar plantations in Europe, and we assessed the impact of isoprene fluxes on ground level O3 concentrations. Our findings suggest that isoprene emissions from existing poplar-for-bioenergy plantations do not significantly affect the ground level of O3 concentration. Indeed the overall land in Europe covered with poplar plantations has not significantly changed over the last two decades despite policy incentives to produce bioenergy crops. The current surface area of isoprene emitting poplars-for-bioenergy remains too limited to significantly enhance O3 concentrations and thus to be considered a potential threat for air quality and human health.

Interaction between isoprene and ozone fluxes in a poplar plantation and its impact on air quality at the European level.

PubMed

Zenone, Terenzio; Hendriks, Carlijn; Brilli, Federico; Fransen, Erik; Gioli, Beniamio; Portillo-Estrada, Miguel; Schaap, Martijn; Ceulemans, Reinhart

2016-09-12

The emission of isoprene and other biogenic volatile organic compounds from vegetation plays an important role in tropospheric ozone (O3) formation. The potentially large expansion of isoprene emitting species (e.g., poplars) for bioenergy production might, therefore, impact tropospheric O3 formation. Using the eddy covariance technique we have simultaneously measured fluxes isoprene, O3 and of CO2 from a poplar (Populus) plantation grown for bioenergy production. We used the chemistry transport model LOTOS-EUROS to scale-up the isoprene emissions associated with the existing poplar plantations in Europe, and we assessed the impact of isoprene fluxes on ground level O3 concentrations. Our findings suggest that isoprene emissions from existing poplar-for-bioenergy plantations do not significantly affect the ground level of O3 concentration. Indeed the overall land in Europe covered with poplar plantations has not significantly changed over the last two decades despite policy incentives to produce bioenergy crops. The current surface area of isoprene emitting poplars-for-bioenergy remains too limited to significantly enhance O3 concentrations and thus to be considered a potential threat for air quality and human health.

Isoprene emission by poplar is not important for the feeding behaviour of poplar leaf beetles.

PubMed

Müller, Anna; Kaling, Moritz; Faubert, Patrick; Gort, Gerrit; Smid, Hans M; Van Loon, Joop J A; Dicke, Marcel; Kanawati, Basem; Schmitt-Kopplin, Philippe; Polle, Andrea; Schnitzler, Jörg-Peter; Rosenkranz, Maaria

2015-06-30

Chrysomela populi (poplar leaf beetle) is a common herbivore in poplar plantations whose infestation causes major economic losses. Because plant volatiles act as infochemicals, we tested whether isoprene, the main volatile organic compound (VOC) produced by poplars (Populus x canescens), affects the performance of C. populi employing isoprene emitting (IE) and transgenic isoprene non-emitting (NE) plants. Our hypothesis was that isoprene is sensed and affects beetle orientation or that the lack of isoprene affects plant VOC profiles and metabolome with consequences for C. populi feeding. Electroantennographic analysis revealed that C. populi can detect higher terpenes, but not isoprene. In accordance to the inability to detect isoprene, C. populi showed no clear preference for IE or NE poplar genotypes in the choice experiments, however, the beetles consumed a little bit less leaf mass and laid fewer eggs on NE poplar trees in field experiments. Slight differences in the profiles of volatile terpenoids between IE and NE genotypes were detected by gas chromatography - mass spectrometry. Non-targeted metabolomics analysis by Fourier Transform Ion Cyclotron Resonance Mass Spectrometer revealed genotype-, time- and herbivore feeding-dependent metabolic changes both in the infested and adjacent undamaged leaves under field conditions. We show for the first time that C. populi is unable to sense isoprene. The detected minor differences in insect feeding in choice experiments and field bioassays may be related to the revealed changes in leaf volatile emission and metabolite composition between the IE and NE poplars. Overall our results indicate that lacking isoprene emission is of minor importance for C. populi herbivory under natural conditions, and that the lack of isoprene is not expected to change the economic losses in poplar plantations caused by C. populi infestation.

Yellow-poplar seedfall pattern

Treesearch

LaMont G. Engle

1960-01-01

Knowing the pattern of seedfall can be helpful when trying to regenerate yellow-poplar. This is especially true if the stand contains only scattered yellow-poplar seed trees. Information obtained from seed collections in Indiana shows that most of the seed falls north and northeast of seed trees.

7. GENERAL VIEW EAST FROM ROOFTOP OF POPLAR FOREST TOWARDS ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

7. GENERAL VIEW EAST FROM ROOFTOP OF POPLAR FOREST TOWARDS SUMMER KITCHEN (FOREGROUND) AND DAIRY; CHIMNEY OF SOUTH TENANT HOUSE BARELY VISIBLE THROUGH TREES; EAST PRIVY RARELY VISIBLE OVER EAST MOUND (1987) - Poplar Forest, Summer Kitchen, State Route 661, Forest, Bedford County, VA

The chronic response of yellow-poplar and eastern white pine to ozone and elevated carbon dioxide: three-year summary

Treesearch

Joanne Rebbeck

1996-01-01

The objective of this study was to determine the long-term effects of ozone (O3) and carbon dioxide (CO2) on the growth and physiology of eastern white pine (Pinus strobus) and yellow-poplar (Liriodendron tulipifera) under plantation conditions. Two separate plantations of each species...

Effect of thinning on height and diameter growth of oak & yellow-poplar saplings

Treesearch

Rufus H., Jr. Allen; David A. Marquis; David A. Marquis

1970-01-01

Studying the response to thinning of a 7- to 9-year-old upland hardwood sapling stand, we found that height growth of yellow-poplar and oak trees was markedly reduced by heavy thinning. This suggests that stand density should be carefully controlled to achieve maximum benefit from thinnings in very young stands.

Effects of nutrient availabiiity on biomass allocation as well as constitutive and rapid induced herbivore resistance in poplar

Treesearch

Carolyn Glynn; Daniel A. Herms; Marie Egawa; Robert Hansen; William J. Mattson

2003-01-01

Many studies have examined effects of nutrient availability on constitutive herbivore resistance of plants, but few have addressed effects on expression of rapid induced resistance (RIR). We quantified effects of two levels of nutrient availability on growth, biomass allocation, photosynthesis, and constitutive secondary metabolism of black poplar (>i>Populus...

Transgenic poplars with reduced lignin show impaired xylem conductivity, growth efficiency and survival

Treesearch

Steven L. Voelker; Barbara Lachenbruch; Frederick C. Meinzer; Peter Kitin; Steven H. Strauss

2011-01-01

We studied xylem anatomy and hydraulic architecture in 14 transgenic insertion events and a control line of hybrid poplar (Populus spp.) that varied in lignin content. Transgenic events had different levels of down-regulation of two genes encoding 4-coumarate:coenzyme A ligase (4CL). Two-year-old trees were characterized after...

Contrasting fine-root production, survival and soil CO2 efflux in pine and poplar plantation

Treesearch

M. D. Coleman; Richard E. Dickson; J. G. Isebrands

2000-01-01

Tree root activity, including fine-root production, turnover and metabolic activity are significant components of forest productivity and nutrient cycling. Differences in root activity among forest types are not well known. A 3-year study was undertaken in red pine (Pinus resinosa Ait.) and hybrid poplar (Populus tristis X P.

Contrasting fine-root production, survival and soil CO2 efflux in pine and poplar plantations

Treesearch

M.D. Coleman; R.E. Dickson; J.G. Isebrands

2000-01-01

Tree root activity, including fine-root production, turnover and metabolic activity are significant components of forest productivity and nutrient cycling. Differences in root activity among forest types are not well known. A 3-year study was undertaken in red pine (Pinus resinosa Ait.) and hybrid poplar (Populus tristis X P.

Isoprene function in two contrasting poplars under salt and sunflecks.

PubMed

Behnke, K; Ghirardo, A; Janz, D; Kanawati, B; Esperschütz, J; Zimmer, I; Schmitt-Kopplin, P; Niinemets, Ü; Polle, A; Schnitzler, J P; Rosenkranz, M

2013-06-01

In the present study, biogenic volatile organic compound (BVOC) emissions and photosynthetic gas exchange of salt-sensitive (Populus x canescens (Aiton) Sm.) and salt-tolerant (Populus euphratica Oliv.) isoprene-emitting and non-isoprene-emitting poplars were examined under controlled high-salinity and high-temperature and -light episode ('sunfleck') treatments. Combined treatment with salt and sunflecks led to an increased isoprene emission capacity in both poplar species, although the photosynthetic performance of P. × canescens was reduced. Indeed, different allocations of isoprene precursors between the cytosol and the chloroplast in the two species were uncovered by means of (13)CO2 labeling. Populus × canescens leaves, moreover, increased their use of 'alternative' carbon (C) sources in comparison with recently fixed C for isoprene biosynthesis under salinity. Our studies show, however, that isoprene itself does not have a function in poplar survival under salt stress: the non-isoprene-emitting leaves showed only a slightly decreased photosynthetic performance compared with wild type under salt treatment. Lipid composition analysis revealed differences in the double bond index between the isoprene-emitting and non-isoprene-emitting poplars. Four clear metabolomics patterns were recognized, reflecting systemic changes in flavonoids, sterols and C fixation metabolites due to the lack/presence of isoprene and the absence/presence of salt stress. The studies were complemented by long-term temperature stress experiments, which revealed the thermotolerance role of isoprene as the non-isoprene-emitting leaves collapsed under high temperature, releasing a burst of BVOCs. Engineered plants with a low isoprene emission potential might therefore not be capable of resisting high-temperature episodes.

Reconnaissance evaluation of contamination in the alluvial aquifer in the East Poplar oil field, Roosevelt County, Montana

USGS Publications Warehouse

Levings, G.W.

1984-01-01

Water moving from north to south in the alluvial aquifer of the Poplar River valley becomes contaminated with sodium chloride in the area underlain by the East Poplar oil fields. Four types of ground water were identified in the study area. Type 1 is sodium bicarbonate water. Type 2 is sodium chloride water with varying quantities of calcium and magnesium. Type 3 water contains sodium and chloride in significantly larger concentrations than Type 2. Type 4 water is the brine being injected into brine-disposal wells. Contamination of the alluvial aquifer is indicated by a brine-freshwater interface in the alluvium, by downstream increase in chloride concentration of the Poplar River, and by downstream change in water type of the Poplar River. Contamination also may be indicated by the distribution of iron and manganese concentrations in water from wells near a brine-disposal well. Possible sources of sodium chloride contamination in the alluvium are brine-disposal wells, pipelines, and storage or evaporation pits. The contamination can occur from leaks in the casing of disposal wells or in pipelines caused by the corrosive nature of the brine or from storage or evaporation pits that have been improperly sealed or have sustained tears in the sealing material. (USGS)

Yellow-Poplar Site Index Curves

Treesearch

Donald E. Beck

1962-01-01

Yellow-poplar (Liriodendron tulipifera L.) occurs naturally throughout the eastern and central United States from southern New England west to Michigan and south to Florida and Louisiana. Because of its wide occurrence, yellow-poplar grows under a variety of climatic, edaphic, and biotic conditions. Combinations of these different environmental...

Sulfate Metabolites of 4-Monochlorobiphenyl in Whole Poplar Plants

PubMed Central

Zhai, Guangshu; Lehmler, Hans-Joachim; Schnoor, Jerald L.

2013-01-01

4-Monochlorobiphenyl (PCB3) has been proven to be transformed into hydroxylated metabolites of PCB3 (OH-PCB3s) in whole poplar plants in our previous work. However, hydroxylated metabolites of PCBs, including OH-PCB3s, as the substrates of sulfotransferases have not been studied in many organisms including plants in vivo. Poplar (Populus deltoides × nigra, DN34) was used to investigate the further metabolism from OH-PCB3s to PCB3 sulfates because it is a model plant and one that is frequently utilized in phytoremediation. Results showed poplar plants could metabolize PCB3 into PCB3 sulfates during 25 day exposures. Three sulfate metabolites, including 2′-PCB3 sulfate, 3′-PCB3 sulfate and 4′-PCB3 sulfate, were identified in poplar roots and their concentrations increased in the roots from day 10 to day 25. The major products were 2′-PCB3 sulfate and 4′-PCB3 sulfate. However, the concentrations of PCB3 sulfates were much lower than those of OH-PCB3s in the roots, suggesting the sequential transformation of these hydroxylated PCB3 metabolites into PCB3 sulfates in whole poplars. In addition, 2′-PCB3 sulfate or 4′-PCB3 sulfate was also found in the bottom wood samples indicating some translocation or metabolism in woody tissue. Results suggested that OH-PCB3s were the substrates of sulfotransferases which catalyzed the formation of PCB3 sulfates in the metabolic pathway of PCB3. PMID:23215248

Ecological risk assessment in a large river-reservoir. 8: Experimental study of the effects of polychlorinated biphenyls on reproductive success in mink

DOE Office of Scientific and Technical Information (OSTI.GOV)

Halbrook, R.S.; Aulerich, R.J.; Bursian, S.J.

1999-04-01

As a component of an ecological risk assessment of Poplar Creek (located on the Oak Ridge Reservation [ORR]) and the Clinch River (a large river-reservoir system), fish from Poplar Creek, the Clinch River, and Atlantic Ocean were fed to ranch mink to evaluate reproductive success. Five diets, each composed of 75% fish and 25% normal ranch mink chow, were prepared. Two diets served as reference diets and contained 75% Atlantic Ocean fish or 75% Clinch River fish collected above the ORR. The fish portion of the remaining three diets contained 25, 50, and 75% fish collected from Poplar Creek andmore » 50, 25, and 0% ocean fish, respectively. Five mink groups (eight females and two males each) were each fed one of the prepared diets for 196 days. Polychlorinated biphenyl concentrations were determined in diets and various mink tissues, ethoxyresorufin-O-deethylase (EROD) activity was determined in liver tissue, and reproductive success was evaluated. Concentrations of PCB were greatest in the diet composed of 75% Poplar Creek fish and in tissues from mink fed this diet and their offspring. There was a trend toward decreased adult female and kit weights and reduced mean litter size in mink fed diets containing 75% Poplar Creek fish; however, at 6 weeks of age, kit survival was similar among diet groups. Liver EROD activity significantly increased in adult female mink fed 50 and 75% Poplar Creek fish diets. Estimated dietary concentrations of PCBs were similar to or slightly lower than concentrations associated with adverse effects in experimentally dosed mink. Mercury (Hg) concentrations previously reported in these same mink were below that associated with adverse effects, and there was no indication of additive or synergistic effects from exposure to PCBs plus Hg. It is unlikely that population-level reproductive effects would be observed in mink consuming fish from Poplar Creek on the ORR.« less

[Water utilization characteristics of the degraded poplar shelterbelts in Zhangbei, Hebei, China.

PubMed

Zhang, Huan; Cao, Jun; Wang, Hua Bing; Song, Bo; Jia, Guo Dong; Liu, Zi Qiang; Yu, Xin Xiao; Zeng, Jia

2018-05-01

In Zhangbei County, Hebei Province, poplar-dominated shelterbelts are degraded to different extents. Water availability is the main limiting factor for plant survival in arid areas. The purpose of this study was to reveal the relationship between water availability and poplar degradation. Based on the hydrogen and oxygen stable isotope techniques, we explored the water sources of Populus simonii under different degradation degrees by comparing the isotopic values of P. simonii xylem water with that in potential water source, and calculated the utilization ratio of each water source. The results showed that the water sources of poplar trees varied with degradation degree. The water sources of P. simonii gradually transferred from the deep layer to the surface layer with the increases of degradation. P. simonii with no degradation mainly absorbed soil water in the range of 320-400 cm, with the utilization rate being 25.1%. P. simonii with slight degradation mainly used soil water at depth of 120-180, 180-240 and 240-320 cm. The total utilization rate of three layers was close to 50.0%, with less utilization of water from other layers. The moderately degraded P. simonii mainly used soil water at depth of 20-40, 40-60 and 60-80 cm. The utilization rate of each layer was 17.5%-20.9%, and the contribution rate of soil water under 120 cm was less than 10.0%. The severely degraded P. simonii mainly used water from surface soil layer (0-20 cm), with the utilization rate being 30.4%, which was significantly higher than that of other water sources. The water sources of poplar shelter forests were gradually shallower during the process of degradation. However, the low soil water content in the shallow layer could not meet the normal water demand of poplar, which would accelerate the degradation and even decline of poplar.

Genome-wide transcriptome profiling of black poplar (Populus nigra L.) under boron toxicity revealed candidate genes responsible in boron uptake, transport and detoxification.

PubMed

Yıldırım, Kubilay; Uylaş, Senem

2016-12-01

Boron (B) is an essential nutrient for normal growth of plants. Despite its low abundance in soils, it could be highly toxic to plants in especially arid and semi-arid environments. Poplars are known to be tolerant species to B toxicity and accumulation. However, physiological and gene regulation responses of these trees to B toxicity have not been investigated yet. Here, B accumulation and tolerance level of black poplar clones were firstly tested in the current study. Rooted cutting of these clones were treated with elevated B toxicity to select the most B accumulator and tolerant genotype. Then we carried out a microarray based transcriptome experiment on the leaves and roots of this genotype to find out transcriptional networks, genes and molecular mechanisms behind B toxicity tolerance. The results of the study indicated that black poplar is quite suitable for phytoremediation of B pollution. It could resist 15 ppm soil B content and >1500 ppm B accumulation in leaves, which are highly toxic concentrations for almost all agricultural plants. Transcriptomics results of study revealed totally 1625 and 1419 altered probe sets under 15 ppm B toxicity in leaf and root tissues, respectively. The highest induction were recorded for the probes sets annotated to tyrosine aminotransferase, ATP binding cassette transporters, glutathione S transferases and metallochaperone proteins. Strong up regulation of these genes attributed to internal excretion of B into the cell vacuole and existence of B detoxification processes in black poplar. Many other candidate genes functional in signalling, gene regulation, antioxidation, B uptake and transport processes were also identified in this hyper B accumulator plant for the first time with the current study. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Properties and utilization of poplar wood

Treesearch

John J. Balatinecz; David E. Kretschmann

2001-01-01

Hybrid poplars are fast-growing, moisture-loving, full-sun-loving large trees that can be a rapid source of wood fiber. With the introduction of waferboard, oriented strandboard (OSB), and laminated strand lumber (LSL), aspen utilization has dramatically increased. Indigenous and hybrid poplars, however, present their own challenges, such as high discoloration...

Survey of twenty-six hybrid poplar lines for poplar borer

Treesearch

W. Doug Stone; T. Keith Beatty; T. Evan Nebeker

2006-01-01

An insect survey was completed on 26 lines of hybrid poplar (Populus nigra x P. maximowiczii) that had the Roundup® Ready and Bt (Bacillus thuringiensis) genes. The survey was conducted in Kentucky in cooperation with MeadWestvaco. A total of 260 trees were evaluated. Survival rate averaged...

Yield of Unthinned Yellow-Poplar

Treesearch

Donald E. Beck; Lino Della-Bianca

1970-01-01

Cubic-foot and board-foot yields of unthinned yellow-poplar (Liriodendron Tulipiferi L.) stands are described in relation to stand age, site index, and number of trees per acre. The yield tables are based on analysis of diameter distributions and height-diameter relationships obtained from 141 natural, unthinned yellow-poplar stands in the...

Case history development of a hybrid poplar nursery at Reynolds Metals Company, Massena, New York. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marler, R.L.

1981-11-01

Intensive cultivation of fast-growing hardwoods, such as hybrid poplars, is a promising method of assuring adequate supplies of biomass for energy purposes. This report details the establishment of a hybrid poplar nursery on formerly unused land at the Reynolds Metals Company's reduction plant in Massena, NY and presents the results obtained during the first growing season. Cuttings from the nursery replanted during the Spring of 1982 are the first phase of a 600-acre hybrid poplar plantation at the Reynolds site.

Fiber Recovery with Chain Flail Delimbing/Debarking and Chipping of Hybrid Poplar

Treesearch

Bruce Hartsough; Raffaele Spinelli; Steve Pottle; John Klepac

2000-01-01

This study determined how much wood was potentially available From short rotation hybrid poplar, and how mtich was actually recovered when trees were delimbed and debarked with chain flails and chipped. 3 1 groups of five trees each were measured and then processed. For trees larger than 50 kg total dry weight, potentially recoverable wood averaged 75% oftotal weight...

Visible dormant buds as related to tree diameter and log position

Treesearch

H. Clay Smith

1967-01-01

Red oaks and yellow-poplars in a stand of second-growth cove hardwoods in West Virginia were studied to determine whether visible dormant buds are related to tree size or log position. No correlation was found between dormant buds and tree size, for either species; but yellow-poplars had a significantly greater number of buds on the upper log.

Growth and Development of Yellow-Poplar Plantations On Three Sites Ranging From 9 to 18 Years

Treesearch

Wayne K. Clatterbuck

2004-01-01

Planting pine for conversion of former agricultural land to managed forests is well-documented, but little informa-tion is available for hardwood plantings. This study references three yellow poplar (Liriodendron tulipifera L.) plantations (ages 9, 12, and 18 years) on different sites totaling 95 acres. The sites were located in middle Tennessee...

Light-use efficiency of native and hybrid poplar genotypes at high levels of intracanopy competition

Treesearch

D. Scott Green; Eric L. Kruger; Glen R, Stanosz; J. G. Isebrands

2001-01-01

In southern Wisconsin, U.S.A., tree growth and associated canopy traits were compared among five native and hybrid genotypes of poplar (Populus spp.) in replicated, monoclonal stands planted at a 1 x 1 m spacing. The overall objective of this study was to assess clonal suitability to cultural conditions entailing high levels of intracanopy...

Effect of sterilizing treatments on survival and growth of hybrid poplar cuttings

Treesearch

Harold F. Ford

1954-01-01

Fungus diseases of poplars might be spread to new locations if hybrid poplar cuttings (now being test-planted in various parts of the northeast) were not sterilized before shipment. Among these diseases are the canker-producing fungi Septoria musiva and Dothichiza populea and the leafblotch fungus Septotinia populiperda.

Dimension yields from yellow-poplar lumber

Treesearch

R. C. Gilmore; J. D. Danielson

1984-01-01

The available supply of yellow poplar (Liriodendron tulipifera L.), its potential for new uses, and its continuing importance to the furniture industry have created a need to accumulate additional information about this species. As an aid to better utilization of this species, charts for determining cutting stock yields from yellow poplar lumber are presented for each...

A comprehensive database of poplar research in North America from 1980 - 2010

Treesearch

David R. Coyle; Jill A. Zalesny; Ronald S. Jr. Zalesny

2010-01-01

Short rotation woody crops such as Populus species and hybrids (hereafter referred to as poplars) are renewable energy feedstocks that can potentially be used to offset electricity generation and natural gas use in many temperature regions. Highly productive poplars grown primarily on marginal agricultural sites are an important component of the...

Harvesting systems and costs for short rotation poplar

Treesearch

B. Rummer; D. Mitchell

2013-01-01

The objective of this review is to compare the cost of coppice and longer rotation poplar harvesting technology. Harvesting technology for short rotation poplar has evolved over the years to address both coppice harvest and single-stem harvest systems. Two potential approaches for coppice harvesting are modified forage harvesters and modified mulcher-balers. Both of...

Methods of rapid, early selection of poplar clones for maximum yield potential: a manual of procedures.

Treesearch

USDA FS

1982-01-01

Instructions, illustrated with examples and experimental results, are given for the controlled-environment propagation and selection of poplar clones. Greenhouse and growth-room culture of poplar stock plants and scions are described, and statistical techniques for discriminating among clones on the basis of growth variables are emphasized.

Potential Utilization of Sweetgum and Yellow-Poplar for Structural Lumber

Treesearch

Timothy D. Faust; Robert H. McAlister; Stanley J. Zarnoch; Christopher B. Stephens

1991-01-01

The forest resource base in the Southeast is rapidly changing. Dwindling reserves of high quality pine sawlogs will provide incentive to utilize low-density hardwoods such as yellow-poplar and sweetgum for structural lumber. Inventories of sweetgum (Liquidambar styraciflua, L.) and yellow-poplar (Liriodendron tulipifera, L.) are currently high and growth is exceeding...

Dense genetic linkage maps of three Populus species (Populus deltoides, P. nigra and P. trichocarpa) based on AFLP and microsatellite markers.

PubMed

Cervera, M T; Storme, V; Ivens, B; Gusmão, J; Liu, B H; Hostyn, V; Van Slycken, J; Van Montagu, M; Boerjan, W

2001-06-01

Populus deltoides, P. nigra, and P. trichocarpa are the most important species for poplar breeding programs worldwide. In addition, Populus has become a model for fundamental research on trees. Linkage maps were constructed for these three species by analyzing progeny of two controlled crosses sharing the same female parent, Populus deltoides cv. S9-2 x P. nigra cv. Ghoy and P. deltoides cv. S9-2 x P. trichocarpa cv. V24. The two-way pseudotestcross mapping strategy was used to construct the maps. Amplified fragment length polymorphism (AFLP) markers that segregated 1:1 were used to form the four parental maps. Microsatellites and sequence-tagged sites were used to align homoeologous groups between the maps and to merge linkage groups within the individual maps. Linkage analysis and alignment of the homoeologous groups resulted in 566 markers distributed over 19 groups for P. deltoides covering 86% of the genome, 339 markers distributed over 19 groups for P. trichocarpa covering 73%, and 369 markers distributed over 28 groups for P. nigra covering 61%. Several tests for randomness showed that the AFLP markers were randomly distributed over the genome.

Dense genetic linkage maps of three Populus species (Populus deltoides, P. nigra and P. trichocarpa) based on AFLP and microsatellite markers.

PubMed Central

Cervera, M T; Storme, V; Ivens, B; Gusmão, J; Liu, B H; Hostyn, V; Van Slycken, J; Van Montagu, M; Boerjan, W

2001-01-01

Populus deltoides, P. nigra, and P. trichocarpa are the most important species for poplar breeding programs worldwide. In addition, Populus has become a model for fundamental research on trees. Linkage maps were constructed for these three species by analyzing progeny of two controlled crosses sharing the same female parent, Populus deltoides cv. S9-2 x P. nigra cv. Ghoy and P. deltoides cv. S9-2 x P. trichocarpa cv. V24. The two-way pseudotestcross mapping strategy was used to construct the maps. Amplified fragment length polymorphism (AFLP) markers that segregated 1:1 were used to form the four parental maps. Microsatellites and sequence-tagged sites were used to align homoeologous groups between the maps and to merge linkage groups within the individual maps. Linkage analysis and alignment of the homoeologous groups resulted in 566 markers distributed over 19 groups for P. deltoides covering 86% of the genome, 339 markers distributed over 19 groups for P. trichocarpa covering 73%, and 369 markers distributed over 28 groups for P. nigra covering 61%. Several tests for randomness showed that the AFLP markers were randomly distributed over the genome. PMID:11404342

Improved diffusivity of NaOH solution in autohydrolyzed poplar sapwood chips for chemi-mechanical pulp production.

PubMed

Zhang, Honglei; Hou, Qingxi; Liu, Wei; Yue, Zhen; Jiang, Xiaoya; Ma, Xixi

2018-07-01

This work investigated the changes in the physical structure of autohydrolyzed poplar sapwood chips and the effect on the subsequent alkali liquor diffusion properties for chemi-mechanical pulping (CMP). An alkali impregnation process was conducted by using the autohydrolyzed poplar sapwood with different levels of autohydrolysis intensity. The results showed that the volume porosity, water constraint capacity, and saturated water absorption of the autohydrolyzed poplar sapwood chips increased. Also, the effective capillary cross-sectional area (ECCSA) in the radial direction and the diffusion coefficients of NaOH solution in both the radial and axial directions all increased. Autohydrolysis pretreatment enhanced the alkali liquor diffusion properties in poplar sapwood chips, and the diffusion coefficient was increased more greatly in the radial direction than that in the axial direction. Copyright © 2018 Elsevier Ltd. All rights reserved.

Mercury Content of Sediments in East Fork Poplar Creek: Current Assessment and Past Trends

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brooks, Scott C.; Eller, Virginia A.; Dickson, Johnbull O.

2017-01-01

This study provided new information on sediment mercury (Hg) and monomethylmercury (MMHg) content and chemistry. The current inventory of Hg in East Fork Poplar Creek (EFPC) bed sediments was estimated to be 334 kg, which represents a ~67% decrease relative to the initial investigations in 1984. MMHg sediment inventory was estimated to be 44.1 g, lower but roughly similar to past estimates. The results support the relevance and potential impacts of other active and planned investigations within the Mercury Remediation Technology Development for Lower East Fork Poplar Creek project (e.g., assessment and control of bank soil inputs, sorbents for Hgmore » and MMHg removal, re-introduction of freshwater clams to EFPC), and identify gaps in current understanding that represent opportunities to understand controlling variables that may inform future technology development studies.« less

Conversion from cropland to short rotation coppice willow and poplar: Accumulation of soil organic carbon

NASA Astrophysics Data System (ADS)

Georgiadis, Petros; Stupak, Inge; Vesterdal, Lars; Raulund-Rasmussen, Karsten

2015-04-01

Increased demand for bioenergy has intensified the production of Short Rotation Coppice (SRC) willow and poplar in temperate zones. We used a combined chronosequence and paired plot approach to study the potential of SRC willow and poplar stands to increase the soil carbon stock compared to stocks of the previous arable land-use. The study focused on well-drained soils. We sampled soil from 30 SRC stands in Denmark and southern Sweden including soils from their adjacent arable fields. The 18 willow and 12 poplar stands formed a chronosequence ranging between 4 and 29 years after conversion. The soil was sampled both with soil cores taken by fixed depths of 0-5, 5-10, 10-15, 15-25, and 25-40 cm and by genetic horizons from soil pits to 1m depth. The aim of the study was to estimate the difference and the ratio between soil carbon contents of the SRC and annual crop land and analyze the results as a chronosequence to examine the effect of age after conversion on the difference. Covariates such as soil type, fertilization type and harvest frequency were also taken into account. Preliminary results suggest an overall increase in carbon stocks over time with average accumulation rates ranging from 0.25 to 0.4 Mg ha-1 yr-1 in willow and poplar stands. Poplar stands had higher rates of C gain, probably due to less frequent harvesting. The differences in carbon between the SRC and the paired cropland were initially negative but changed to positive over time, implying loss of carbon after conversion and a later gain in soil carbon with stand age. Pairwise differences ranged from -25 Mg C ha-1 to 37 Mg C ha-1 for the top 40 cm. The carbon stock ratio of the SRC stand to the arable land was estimated to minimize the effect of site-related factors. The results of this analysis suggested that the ratio increased significantly with age after conversion for the top 10 cm of the soil, both for poplar and willow. A slight increase with age was also noticed at the deeper depths, but it was not significant. The increasing soil carbon stocks in SRC stands on former cropland can be attributed to the increased leaf and litter input from the perennial SRC plantations as well as less stimulation of organic matter decomposition after cessation of annual. Initial losses of soil carbon after the land use change have also been reported by other studies, but the soil carbon accumulation high rates suggest that SRC can act as sinks at least for some decades. Our results indicate that a steady state has not yet been reached after 29 years. Key words: Bioenergy,Land Use Change, poplar, Short Rotation Coppice, Soil Organic Carbon, willow,

Lignin-modifying enzymes of the white rot basidiomycete Ganoderma lucidum

DOE Office of Scientific and Technical Information (OSTI.GOV)

D /Souza, T.M.; Merritt, C.S.; Reddy, C.A.

1999-12-01

Ganoderma lucidum, a white rot basidiomycete widely distributed worldwide, was studied for the production of the lignin-modifying enzymes laccase, manganese-dependent peroxidase (MnP), and lignin peroxidase (LiP). Laccase levels observed in high-nitrogen shaken cultures were much greater than those seen in low-nitrogen, malt extract, or wool-grown cultures and those reported for most other white rot fungi to date. Laccase production was readily seen in cultures grown with pine or poplar as the sole carbon and energy source. Cultures containing both pine and poplar showed 5- to 10-fold-higher levels of laccase than cultures containing pine or poplar alone. Since syringyl units aremore » structural components important in poplar lignin and other hardwoods but much less so in pine lignin and other softwoods, pine cultures were supplemented with syringic acid, and this resulted in laccase levels comparable to those seen in pine-plus-poplar cultures. Sodium dodecyl sulfate-polyacrylamide gel electrophoresis of concentrated extracellular culture fluid from HM cultures showed two laccase activity bands, where as isoelectric focusing revealed five major laccase activity bands with estimated pIs of 3.0, 4.25, 4.5, and 5.1. Low levels of MnP activity were detected in poplar-grown cultures but not in cultures grown with pine, with pine plus syringic acid, or in HN medium. No LiP activity was seen in any of the media tested; however, probing the genomic DNA with the LiP cDNA (CLG4) from the white rot fungus Phanerochaete chrysosporium showed distinct hybridization bands suggesting the presence of lip-like sequences in G. lucidum.« less

Water relations and gas exchange in poplar and willow under water stress and elevated atmospheric CO2.

PubMed

Johnson, Jon D; Tognetti, Roberto; Paris, Piero

2002-05-01

Predictions of shifts in rainfall patterns as atmospheric [CO2] increases could impact the growth of fast growing trees such as Populus spp. and Salix spp. and the interaction between elevated CO2 and water stress in these species is unknown. The objectives of this study were to characterize the responses to elevated CO2 and water stress in these two species, and to determine if elevated CO2 mitigated drought stress effects. Gas exchange, water potential components, whole plant transpiration and growth response to soil drying and recovery were assessed in hybrid poplar (clone 53-246) and willow (Salix sagitta) rooted cuttings growing in either ambient (350 &mgr;mol mol-1) or elevated (700 &mgr;mol mol-1) atmospheric CO2 concentration ([CO2]). Predawn water potential decreased with increasing water stress while midday water potentials remained unchanged (isohydric response). Turgor potentials at both predawn and midday increased in elevated [CO2], indicative of osmotic adjustment. Gas exchange was reduced by water stress while elevated [CO2] increased photosynthetic rates, reduced leaf conductance and nearly doubled instantaneous transpiration efficiency in both species. Dark respiration decreased in elevated [CO2] and water stress reduced Rd in the trees growing in ambient [CO2]. Willow had 56% lower whole plant hydraulic conductivity than poplar, and showed a 14% increase in elevated [CO2] while poplar was unresponsive. The physiological responses exhibited by poplar and willow to elevated [CO2] and water stress, singly, suggest that these species respond like other tree species. The interaction of [CO2] and water stress suggests that elevated [CO2] did mitigate the effects of water stress in willow, but not in poplar.

Biological Control of Septoria Leaf Spot Disease of Hybrid Poplar in the Field

Treesearch

Laszlo Gyenis; Neil A. Anderson; Michael E. Ostry

2003-01-01

Biological control of Septoria leaf spot of hrhrid poplars was investigated using disease-suppressive Streptomyces strains. Field experiments were conducted in 1998 and 1999 on potted trees placed in a hybrid poplar plantation near Rosemount, MN, and on field-planted trees in 1998 at St. Paul. At both locations, one resistant and three susceptible...

Use of Sulfometuron in Hybrid Poplar Energy Plantations

Treesearch

Daniel A. Netzer

1995-01-01

Reports that low rates of sulfometuron, 70 grams per hactare (1 ounce product or 0.75 ounces active ingredient per acre), applied when hybrid poplars are completely dormant, can provide season-long weed control and increase hybrid poplar growth. If plantation access is not possible before growth activity begins in the spring, late fall application of this herbicide...

75 FR 30799 - Notice of a Waiver of Section 1605 of the American Recovery and Reinvestment Act of 2009 (ARRA...

Federal Register 2010, 2011, 2012, 2013, 2014

2010-06-02

... DEPARTMENT OF EDUCATION Notice of a Waiver of Section 1605 of the American Recovery and... 1605 of the American Recovery and Reinvestment Act of 2009 (ARRA) for Poplar School District, Poplar... Buy American requirements in section 1605(a) of the ARRA (Buy American Requirements) for the Poplar...

Gene and enhancer trap tagging of vascular-expressed genes in poplar trees

Treesearch

Andrew Groover; Joseph R. Fontana; Gayle Dupper; Caiping Ma; Robert Martienssen; Steven Strauss; Richard Meilan

2004-01-01

We report a gene discovery system for poplar trees based on gene and enhancer traps. Gene and enhancer trap vectors carrying the β-glucuronidase (GUS) reporter gene were inserted into the poplar genome via Agrobacterium tumefaciens transformation, where they reveal the expression pattern of genes at or near the insertion sites. Because GUS...

An approach for siting poplar energy production systems to increase productivity and associated ecosystem services

Treesearch

R.S. Jr. Zalesny; D.M. Donner; D.R. Coyle; W.L. Headlee; R.B. Hall

2010-01-01

Short rotation woody crops (SRWC) such as Populus species and hybrids (i.e., poplars) are renewable energy feedstocks that are vital to reducing our dependence on non-renewable and foreign sources of energy used for heat, power, and transportation fuels. Highly productive poplars grown primarily on marginal agricultural sites are an important...

Board-Foot and Diameter Growth of Yellow-Poplar After Thinning

Treesearch

Donald E. Beck; Lino Della-Bianca

1975-01-01

Board-foot growth and yield of thinned yellow-poplar stands (Liriodendron tulipifera L.)is related to age, site index, residual basal area, and residual quadratic mean stand diameter after thinning. Diameter growth of individual trees is increased considerably by thinning. Equations describing growth and yield are based on data from 141 natura1 yellow-poplar stands in...

Environmental applications of poplars and willows

Treesearch

J.G. Isebrands; P. Aronsson; M. Carlson; R. Ceulemans; M. Coleman; N. Dickinson; J. Dimitriou; S. Doty; E. Gardiner; K. Heinsoo; J.D. Johnson; Y.B. Koo; J. Kort; J. Kuzovkina; L. Licht; A.R. McCracken; I. McIvor; P. Mertens; K. Perttu; D. Riddell-Black; B. Robins; G. Scarascia-Mugnozza; W.R. Schroeder; John Stanturf; T.A. Volk; M. Weih

2014-01-01

Poplars and willows have been planted for environmental purposes for millennia. There are reports that poplars were planted to improve the human environment 4000 years ago in the third dynasty of Ur, for streamside stabilization 2000 years ago in what is now the south-western USA by native North Americans and for urban amenities by the early Chinese dynasties (see...

Tyloses and phenolic deposits in xylem vessels impede water transport in low-lignin transgenic poplars: a study by cryo-fluorescence microscopy

Treesearch

Peter Kitin; Steven L. Voelker; Frederick C. Meinzer; Hans Beekman; Steven H. Strauss; Barbara Lachenbruch

2010-01-01

Of 14 transgenic poplar genotypes (Populus tremula x Populus alba) with antisense 4-coumarate:coenzynle A ligase that were grown in the field for 2 years, five that had substantial lignin reductions also had greatly reduced xylem-specific conductivity compared with that of control trees and those transgenic events with small...

Phylogeographic patterns of the desert poplar in Northwest China shaped by both geology and climatic oscillations.

PubMed

Zeng, Yan-Fei; Zhang, Jian-Guo; Abuduhamiti, Bawerjan; Wang, Wen-Ting; Jia, Zhi-Qing

2018-05-25

The effects of historical geology and climatic events on the evolution of plants around the Qinghai-Tibetan Plateau region have been at the center of debate for years. To identify the influence of the uplift of the Tianshan Mountains and/or climatic oscillations on the evolution of plants in arid northwest China, we investigated the phylogeography of the Euphrates poplar (Populus euphratica) using chloroplast DNA (cpDNA) sequences and nuclear microsatellites, and estimated its historical distribution using Ecological Niche Modeling (ENM). We found that the Euphrates poplar differed from another desert poplar, P. pruinosa, in both nuclear and chloroplast DNA. The low clonal diversity in both populations reflected the low regeneration rate by seed/seedlings in many locations. Both cpDNA and nuclear markers demonstrated a clear divergence between the Euphrates poplar populations from northern and southern Xinjiang regions. The divergence time was estimated to be early Pleistocene based on cpDNA, and late Pleistocene using an Approximate Bayesian Computation analysis based on microsatellites. Estimated gene flow was low between these two regions, and the limited gene flow occurred mainly via dispersal from eastern regions. ENM analysis supported a wider distribution of the Euphrates poplar at 3 Ma, but a more constricted distribution during both the glacial period and the interglacial period. These results indicate that the deformation of the Tianshan Mountains has impeded gene flow of the Euphrates poplar populations from northern and southern Xinjiang, and the distribution constriction due to climatic oscillations further accelerated the divergence of populations from these regions. To protect the desert poplars, more effort is needed to encourage seed germination and seedling establishment, and to conserve endemic gene resources in the northern Xinjiang region.

Profile of Polyphenolic and Essential Oil Composition of Polish Propolis, Black Poplar and Aspens Buds.

PubMed

Okińczyc, Piotr; Szumny, Antoni; Szperlik, Jakub; Kulma, Anna; Franiczek, Roman; Żbikowska, Beata; Krzyżanowska, Barbara; Sroka, Zbigniew

2018-05-25

In this work, we studied similarities and differences between 70% ethanol in water extract (70EE) and essential oils (EOs) obtained from propolis, black poplars ( Populus nigra L.) and aspens ( P. tremula L.) to ascertain which of these is a better indicator of the plant species used by bees to collect propolis precursors. Composition of 70EE was analyzed by UPLC-PDA-MS, while GC-MS was used to research the EOs. Principal component analyses (PCA) and calculations of Spearman's coefficient rank were used for statistical analysis. Statistical analysis exhibited correlation between chemical compositions of propolis and Populus buds' 70EE. In the case of EOs, results were less clear. Compositions of black poplars, aspens EOs and propolises have shown more variability than 70EE. Different factors such as higher instability of EOs compared to 70EE, different degradation pattern of benzyl esters to benzoic acid, differences in plant metabolism and bees' preferences may be responsible for these phenomena. Our research has therefore shown that 70EE of propolis reflected the composition of P. nigra or complex aspen⁻black poplar origin.

Hybrid poplars: fast-growing, disease-resistant species has multiple uses

Treesearch

Ronald S., Jr. Zalesny

2004-01-01

The production of alternative fuels as a source of energy is a focus of concern in the United States. Intensively cultured hybrid poplar plantations have been used to supplement industrial fiber supplies in several areas of the United States, and have therefore gained attention in the North Central region. Attention is focused on poplars because they are fast growing...

Hybrid poplar planting in the Lake States

Treesearch

Paul O. Rudolf

1948-01-01

Poplars are among our fastest growing trees. Many of them are also relatively easy to grow from cuttings and to hybridize by means of cut flower-bearing twigs. Their wood is in demand for pulpwood, veneer for match and crate production, boxboards, and other uses. For these reasons there has been interest in many countries in selecting and breeding poplars. The tree...

Early root development of poplars ( Populus spp.) in relation to moist and saturated soil conditions

Treesearch

Rebecka Mc Carthy; Magnus Löf; Emile S. Gardiner

2017-01-01

Poplars (Populus spp.) are among the fastest growing trees raised in temperate regions of the world. Testing of newly developed cultivars informs assessment of potential planting stock for local environments. Initial rooting by nine poplar clones was tested in moist and saturated soil conditions during an 18-day greenhouse experiment. Clones responded differently to...

Recent advances in research of some pest problems of hybrid populus in Michigan and Wisconsin

Treesearch

Lincoln M. Moore; Louis F. Wilson

1983-01-01

Hybrid Populus clones were examined for impact from and resistance to attack from several insects and diseases. Cottonwood leaf beetle, poplar-and-willow borer, and Septoria canker were most injurious. The spotted poplar aphid and poplar-gall saperda, even when abundant, caused only minor impact. The tarnished plant bug, a newly identified pest of...

Clonal variation in survival and growth of hybrid poplar and willow in an in situ trial on soils heavily contaminated with petroleum hydrocarbons

Treesearch

Ronald S., Jr. Zalesny; Edmund O. Bauer; Richard B. Hall; Jill A. Zalesny; Joshua Kunzman; Chris J. Rog; Don E. Riemenschneider

2005-01-01

Species and hybrids between species belonging to the genera Populus (poplar) and Salix (willow) have been used successfully for phytoremediation of contaminated soils. Our objectives were to: 1) evaluate the potential for establishing genotypes of poplar and willow on soils heavily contaminated with petroleum hydrocarbons and 2)...

Fertilizer and Mulch Improves Yellow-Poplar Growth on Exposed harsells Subsoils

Treesearch

John K. Francis

1977-01-01

Fertilizing and mulching of eroded Hartsells soil increased height and diameter of yellow-poplars. To see if chemical infertility of exposed Hartsells subsoils limits yellow-poplar growth and to test fertilizer and mulch as remedial agents, seedlings were planted on undisturbed soil, soil with the topsoil removed, and soil with the topsoil removed but mulched with leaf...

Rhizosphere Competitiveness of Trichloroethylene-Degrading, Poplar-Colonizing Recombinant Bacteria

PubMed Central

Shim, Hojae; Chauhan, Sadhana; Ryoo, Doohyun; Bowers, Kally; Thomas, Stuart M.; Canada, Keith A.; Burken, Joel G.; Wood, Thomas K.

2000-01-01

Indigenous bacteria from poplar tree (Populus canadensis var. eugenei ‘Imperial Carolina’) and southern California shrub rhizospheres, as well as two tree-colonizing Rhizobium strains (ATCC 10320 and ATCC 35645), were engineered to express constitutively and stably toluene o-monooxygenase (TOM) from Burkholderia cepacia G4 by integrating the tom locus into the chromosome. The poplar and Rhizobium recombinant bacteria degraded trichloroethylene at a rate of 0.8 to 2.1 nmol/min/mg of protein and were competitive against the unengineered hosts in wheat and barley rhizospheres for 1 month (colonization occurred at a level of 1.0 × 105 to 23 × 105 CFU/cm of root). In addition, six of these recombinants colonized poplar roots stably and competitively with populations as large as 79% ± 12% of all rhizosphere bacteria after 28 days (0.2 × 105 to 31 × 105 CFU/cm of root). Furthermore, five of the most competitive poplar recombinants (e.g., Pb3-1 and Pb5-1, which were identified as Pseudomonas sp. strain PsK recombinants) retained the ability to express TOM for 29 days as 100% ± 0% of the recombinants detected in the poplar rhizosphere expressed TOM constitutively. PMID:11055909

Signatures of cinnamyl alcohol dehydrogenase deficiency in poplar lignins.

PubMed

Lapierre, Catherine; Pilate, Gilles; Pollet, Brigitte; Mila, Isabelle; Leplé, Jean-Charles; Jouanin, Lise; Kim, Hoon; Ralph, John

2004-02-01

A series of transgenic poplars down-regulated for cinnamyl alcohol dehydrogenase (CAD) was analyzed by thioacidolysis. Among the lignin-derived monomers, the indene compounds that were recently shown to originate from sinapaldehyde incorporated into lignins through 8-O-4-cross-coupling, were found to increase as a function of CAD deficiency level. While these syringyl markers were recovered in substantial amounts in the most severely depressed lines, the markers for coniferaldehyde incorporation were recovered in only low amounts. In conjunction with these additional sinapaldehyde units and relative to the control samples, lignins in CAD-deficient poplar lines had less conventional syringyl-units and beta-O-4-bonds and more free phenolic groups. We found that almost half of the polymers in the most deficient lines could be solubilized in alkali and at room temperature. This unusual behavior suggests that lignins in CAD-deficient poplars occur as small, alkali-leachable lignin domains. That mainly sinapaldehyde incorporates into the lignins of CAD-deficient poplars suggests that the recently identified sinapyl alcohol dehydrogenase (SAD), which is structurally distinct from the CAD enzyme targeted herein, does not play any substantial role in constitutive lignification in poplar.

The transcription factor MYB115 contributes to the regulation of proanthocyanidin biosynthesis and enhances fungal resistance in poplar.

PubMed

Wang, Lijun; Ran, Lingyu; Hou, Yisu; Tian, Qiaoyan; Li, Chaofeng; Liu, Rui; Fan, Di; Luo, Keming

2017-07-01

Proanthocyanidins (PAs) are major defense phenolic compounds in the leaves of poplar (Populus spp.) in response to abiotic and biotic stresses. Transcriptional regulation of PA biosynthetic genes by the MYB-basic helix-loop-helix (bHLH)-WD40 complexes in poplar is not still fully understood. Here, an Arabidopsis TT2-like gene MYB115 was isolated from Populus tomentosa and characterized by various molecular, genetic and biochemical approaches. MYB115 restored PA productions in the seed coat of the Arabidopsis tt2 mutant. Overexpression of MYB115 in poplar activated expression of PA biosynthetic genes, resulting in a significant increase in PA concentrations. By contrast, the CRISPR/Cas9-generated myb115 mutant exhibited reduced PA content and decreased expression of PA biosynthetic genes. MYB115 directly activated the promoters of PA-specific structural genes. MYB115 interacted with poplar TT8. Coexpression of MYB115, TT8 and poplar TTG1 significantly enhanced the expression of ANR1 and LAR3. Additionally, transgenic plants overexpressing MYB115 had increased resistance to the fungal pathogen Dothiorella gregaria, whereas myb115 mutant exhibited greater sensitivity compared with wild-type plants. Our data provide insight into the regulatory mechanisms controlling PA biosynthesis by MYB115 in poplar, which could be effectively employed for metabolic engineering of PAs to improve resistance to fungal pathogens. No claim to original Chinese Government works New Phytologist © 2017 New Phytologist Trust.

A structured understanding of cellobiohydrolase I binding to poplar lignin fractions after dilute acid pretreatment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yao, Lan; Yoo, Chang Geun; Meng, Xianzhi

Background: Cellulase adsorption to lignin is considered a cost barrier for bioethanol production; however, its detailed association mechanism is still not fully understood. In this study, two natural poplar variants with high and low sugar release performance were selected as the low and high recalcitrant raw materials (named L and H, respectively). Three different lignin fractions were extracted using ethanol, followed by p-dioxane and then cellulase treatment from the dilute acid pretreated poplar solids (fraction 1, 2, and 3, respectively).Results: Each lignin fraction had different physicochemical properties. Ethanol-extracted lignin had the lowest weight average molecular weight, while the molecular weightsmore » for the other two lignin fractions were similar. 31P NMR analysis revealed that lignin fraction with higher molecular weight contained more aliphatic hydroxyl groups and less phenolic hydroxyl groups. Semi-quantitative analysis by 2D HSQC NMR indicated that the lignin fractions isolated from the natural variants had different contents of syringyl (S), guaiacyl (G) and interunit linkages. Lignin extracted by ethanol contained the largest amount of S units, the smallest amounts of G and p-hydroxybenzoate (PB) subunits, while the contents of these lignin subunits in the other two lignin fractions were similar. The lignin fraction obtained after cellulase treatment was primarily comprised of β-O-4 linkages with small amounts of β-5 and β–β linkages. The binding strength of these three lignin fractions obtained by Langmuir equations were in the order of L1 > L3 > L2 for the low recalcitrance poplar and H1 > H2 > H3 for the high recalcitrance poplar.Conclusions: Overall, adsorption ability of lignin was correlated with the sugar release of poplar. Structural features of lignin were associated with its binding to CBH. For natural poplar variants, lignin fractions with lower molecular weight and polydispersity index (PDI) exhibited more CBH adsorption ability. Lignins with more phenolic hydroxyl groups had higher CBH binding strength. It was also found that lignin fractions with more condensed aromatics adsorbed more CBH likely attributed to stronger hydrophobic interactions.« less

A structured understanding of cellobiohydrolase I binding to poplar lignin fractions after dilute acid pretreatment.

PubMed

Yao, Lan; Yoo, Chang Geun; Meng, Xianzhi; Li, Mi; Pu, Yunqiao; Ragauskas, Arthur J; Yang, Haitao

2018-01-01

Cellulase adsorption to lignin is considered a cost barrier for bioethanol production; however, its detailed association mechanism is still not fully understood. In this study, two natural poplar variants with high and low sugar release performance were selected as the low and high recalcitrant raw materials (named L and H , respectively). Three different lignin fractions were extracted using ethanol, followed by p -dioxane and then cellulase treatment from the dilute acid pretreated poplar solids (fraction 1, 2, and 3, respectively). Each lignin fraction had different physicochemical properties. Ethanol-extracted lignin had the lowest weight average molecular weight, while the molecular weights for the other two lignin fractions were similar. 31 P NMR analysis revealed that lignin fraction with higher molecular weight contained more aliphatic hydroxyl groups and less phenolic hydroxyl groups. Semi-quantitative analysis by 2D HSQC NMR indicated that the lignin fractions isolated from the natural variants had different contents of syringyl (S), guaiacyl (G) and interunit linkages. Lignin extracted by ethanol contained the largest amount of S units, the smallest amounts of G and p -hydroxybenzoate (PB) subunits, while the contents of these lignin subunits in the other two lignin fractions were similar. The lignin fraction obtained after cellulase treatment was primarily comprised of β- O -4 linkages with small amounts of β-5 and β-β linkages. The binding strength of these three lignin fractions obtained by Langmuir equations were in the order of L 1  >  L 3  >  L 2 for the low recalcitrance poplar and H 1  >  H 2  >  H 3 for the high recalcitrance poplar. Overall, adsorption ability of lignin was correlated with the sugar release of poplar. Structural features of lignin were associated with its binding to CBH. For natural poplar variants, lignin fractions with lower molecular weight and polydispersity index (PDI) exhibited more CBH adsorption ability. Lignins with more phenolic hydroxyl groups had higher CBH binding strength. It was also found that lignin fractions with more condensed aromatics adsorbed more CBH likely attributed to stronger hydrophobic interactions.

A structured understanding of cellobiohydrolase I binding to poplar lignin fractions after dilute acid pretreatment

DOE PAGES

Yao, Lan; Yoo, Chang Geun; Meng, Xianzhi; ...

2018-04-04

Background: Cellulase adsorption to lignin is considered a cost barrier for bioethanol production; however, its detailed association mechanism is still not fully understood. In this study, two natural poplar variants with high and low sugar release performance were selected as the low and high recalcitrant raw materials (named L and H, respectively). Three different lignin fractions were extracted using ethanol, followed by p-dioxane and then cellulase treatment from the dilute acid pretreated poplar solids (fraction 1, 2, and 3, respectively).Results: Each lignin fraction had different physicochemical properties. Ethanol-extracted lignin had the lowest weight average molecular weight, while the molecular weightsmore » for the other two lignin fractions were similar. 31P NMR analysis revealed that lignin fraction with higher molecular weight contained more aliphatic hydroxyl groups and less phenolic hydroxyl groups. Semi-quantitative analysis by 2D HSQC NMR indicated that the lignin fractions isolated from the natural variants had different contents of syringyl (S), guaiacyl (G) and interunit linkages. Lignin extracted by ethanol contained the largest amount of S units, the smallest amounts of G and p-hydroxybenzoate (PB) subunits, while the contents of these lignin subunits in the other two lignin fractions were similar. The lignin fraction obtained after cellulase treatment was primarily comprised of β-O-4 linkages with small amounts of β-5 and β–β linkages. The binding strength of these three lignin fractions obtained by Langmuir equations were in the order of L1 > L3 > L2 for the low recalcitrance poplar and H1 > H2 > H3 for the high recalcitrance poplar.Conclusions: Overall, adsorption ability of lignin was correlated with the sugar release of poplar. Structural features of lignin were associated with its binding to CBH. For natural poplar variants, lignin fractions with lower molecular weight and polydispersity index (PDI) exhibited more CBH adsorption ability. Lignins with more phenolic hydroxyl groups had higher CBH binding strength. It was also found that lignin fractions with more condensed aromatics adsorbed more CBH likely attributed to stronger hydrophobic interactions.« less

Biochar as a substitute for vermiculite in potting mix for hybrid poplar

Treesearch

William L. Headlee; Catherine E. Brewer; Richard B. Hall

2014-01-01

The purpose of this study was to evaluate biochar as a substitute for vermiculite in potting mixes for unrooted vegetative cuttings of hybrid poplar as represented by the clone ‘NM6’ (Populus nigra L. × Populus suaveolens Fischer subsp. maximowiczii A. Henry). We compared three treatments (peat moss (control), peat moss mixed with vermiculite, and peat moss mixed with...

Comparing Soil Carbon of Short Rotation Poplar Plantations with Agricultural Crops and Woodlots in North Central United States

Treesearch

Mark D. Coleman; J.G. Isebrands; David N. Tolsted; Virginia R. Tolbert

2004-01-01

We collected soil samples from 27 study sites across North Central United States to compare the soil carbon of short rotation poplar plantations to adjacent agricultural crops and woodlots. Soil organic carbon (SOC) ranged from 20 to more than 160 Mg/ha across the sampled sites. Lowest SOC levels were found in uplands and highest levels in riparian soils. We attributed...

Cytospora species from Populus and Salix in China with C. davidiana sp. nov.

PubMed

Wang, Yan-Li; Lu, Quan; Decock, Cony; Li, Yong-Xia; Zhang, Xing-Yao

2015-05-01

Poplar and willow plantations have become widespread in China, in order to meet national economic and environmental needs. The emergence of several pathogens is enhanced by climatic change and associated human factors. Species of Cytospora are well-known pathogens on poplar and willow, and cause stem cankers and diebacks. In the present study, we conducted a survey of Cytospora species occurring on Populus spp. and Salix spp. in China. We used morphological examination and phylogenetic inferences, based on the DNA sequence data from the internal transcribed spacer regions (ITS1, 5.8S rDNA, and ITS2) and partial β-tubulin gene, to identify six Cytospora species occurring on poplar and willow. Five of these species belonged to known taxa, viz. Cytospora chrysosperma (asexual state of Valsa sordida), Cytospora translucens (asexual state of Leucostoma translucens), Cytospora fugax (asexual state of Valsa salicina), Cytospora atrocirrhata, and Cytospora kantschavelii. Our study yielded a new species, Cytospora davidiana sp. nov., on poplar. The new species is characterized by typical torsellioid conidiomata. An additional Cytospora sp. 1, which formed a distinct clade in the phylogenetic inferences, remains unnamed; the paucity of available materials prevented phenotypical characterization. Copyright © 2015 The British Mycological Society. Published by Elsevier Ltd. All rights reserved.

Poplar Wood Rays Are Involved in Seasonal Remodeling of Tree Physiology1[C][W

PubMed Central

Larisch, Christina; Dittrich, Marcus; Wildhagen, Henning; Lautner, Silke; Fromm, Jörg; Polle, Andrea; Hedrich, Rainer; Rennenberg, Heinz; Müller, Tobias; Ache, Peter

2012-01-01

Understanding seasonality and longevity is a major challenge in tree biology. In woody species, growth phases and dormancy follow one another consecutively. In the oldest living individuals, the annual cycle may run for more than 1,000 years. So far, however, not much is known about the processes triggering reactivation from dormancy. In this study, we focused on wood rays, which are known to play an important role in tree development. The transition phase from dormancy to flowering in early spring was compared with the phase of active growth in summer. Rays from wood samples of poplar (Populus × canescens) were enriched by laser microdissection, and transcripts were monitored by poplar whole-genome microarrays. The resulting seasonally varying complex expression and metabolite patterns were subjected to pathway analyses. In February, the metabolic pathways related to flower induction were high, indicating that reactivation from dormancy was already taking place at this time of the year. In July, the pathways related to active growth, like lignin biosynthesis, nitrogen assimilation, and defense, were enriched. Based on “marker” genes identified in our pathway analyses, we were able to validate periodical changes in wood samples by quantitative polymerase chain reaction. These studies, and the resulting ray database, provide new insights into the steps underlying the seasonality of poplar trees. PMID:22992511

Delimbing hybrid poplar prior to processing with a flail/chipper

Treesearch

Bruce Hartsough; Raffaele Spinelli; Steve Pottle

2000-01-01

We compared the performance of a flail/chipper for processing a) whole poplar trees and b) poplar trees that had been roughly delimbed with a pull-through delimber. Production rate was about 10% higher for the delimbed trees. The reduced cost of flail/chipping would not cover the additional cost of delimbing with the machine mix tested, but changes to equipment might...

Sapflow of hybrid poplar (Populus nigra L. x P. maximowiczii A. Henry 'NM6') during phytoremediation of landfill leachate

Treesearch

Ronald S., Jr. Zalesny; Adam H. Wiese; Edmund O. Bauer; Don E. Riemenschneider

2006-01-01

Poplars are ideal for phytoremediation because of their high water usage, fast growth, and deep root systems. We measured in 2002 and 2003 the sapflow of hybrid poplars (Populus nigra L. x P. maximowiczii A. Henry 'NM6') planted in 1999 for phytoremediation of a landfill in Rhinelander, WI, USA (45.6?N, 89.4?W).

Hybrid poplar pulpwood and lumber from a reclaimed strip-mine

Treesearch

Walter H. Davidson

1979-01-01

A 2-acre hybrid poplar planting on a reclaimed strip-mine was harvested at age 16. The commercial clearcut yielded 90 tons of pulpwood and 9,400 board feet of lumber. This is equal to a growth rate of approximately 2 cords per acre per year. Selected physical properties of the hybrid poplars were compared with those of other commercial eastern species.

[Difference of water relationships of poplar trees in Zhangbei County, Hebei, China based on stable isotope and thermal dissipation method].

PubMed

Miao, Bo; Meng, Ping; Zhang, Jin Song; He, Fang Jie; Sun, Shou Jia

2017-07-18

The water sources and transpiration of poplar trees in Zhangbei County were measured using stable hydrogen isotope and thermal dissipation method. The differences in water relationships between dieback and non-dieback poplar trees were analyzed. The results showed that the dieback trees mainly used shallow water from 0-30 cm soil layer during growing season while the non-dieback trees mainly used water from 30-80 cm soil layer. There was a significant difference in water source between them. The non-dieback trees used more water from middle and deep soil layers than that of the dieback trees during the dry season. The percentage of poplar trees using water from 0-30 cm soil layer increased in wet season, and the increase of dieback trees was higher than that of non-dieback trees. The contributions of water from 30-180 cm soil layer of dieback and non-dieback trees both decreased in wet season. The sap flow rate of non-dieback trees was higher than that of dieback trees. There was a similar variation tend of sap flow rate between dieback and non-dieback trees in different weather conditions, but the start time of sap flow of non-dieback trees was earlier than that of dieback trees. Correlation analysis showed that the sap flow rate of either dieback or non-dieback poplar trees strongly related to soil temperature, wind speed, photosynthetically active radiation, relative humidity and air temperature. The sap flow rate of die-back poplar trees strongly negatively related to soil temperature and relative humidity, and strongly positively related to the other factors. The sap flow rate of non-dieback poplar trees only strongly negatively related to relative humidity but positively related to the other factors. The results revealed transpiration of both poplar trees was easily affected by environmental factors. The water consumption of dieback trees was less than non-dieback trees because the cumulative sap flow amount of dieback trees was lower. Reduced transpiration of dieback trees couldn't help to prevent poplar forest declining due to shallow water source.

A Model of Overall Survival Predicts Treatment Outcomes with Atezolizumab versus Chemotherapy in Non-Small Cell Lung Cancer Based on Early Tumor Kinetics.

PubMed

Claret, Laurent; Jin, Jin Y; Ferté, Charles; Winter, Helen; Girish, Sandhya; Stroh, Mark; He, Pei; Ballinger, Marcus; Sandler, Alan; Joshi, Amita; Rittmeyer, Achim; Gandara, David; Soria, Jean-Charles; Bruno, René

2018-04-23

Purpose: Standard endpoints often poorly predict overall survival (OS) with immunotherapies. We investigated the predictive performance of model-based tumor growth inhibition (TGI) metrics using data from atezolizumab clinical trials in patients with non-small cell lung cancer. Experimental Design: OS benefit with atezolizumab versus docetaxel was observed in both POPLAR (phase II) and OAK (phase III), although progression-free survival was similar between arms. A multivariate model linking baseline patient characteristics and on-treatment tumor growth rate constant (KG), estimated using time profiles of sum of longest diameters (RECIST 1.1) to OS, was developed using POPLAR data. The model was evaluated to predict OAK outcome based on estimated KG at TGI data cutoffs ranging from 10 to 122 weeks. Results: In POPLAR, TGI profiles in both arms crossed at 25 weeks, with more shrinkage with docetaxel and slower KG with atezolizumab. A log-normal OS model, with albumin and number of metastatic sites as independent prognostic factors and estimated KG, predicted OS HR in subpopulations of patients with varying baseline PD-L1 expression in both POPLAR and OAK: model-predicted OAK HR (95% prediction interval), 0.73 (0.63-0.85), versus 0.73 observed. The POPLAR OS model predicted greater than 97% chance of success of OAK (significant OS HR, P < 0.05) from the 40-week data cutoff onward with 50% of the total number of tumor assessments when a successful study was predicted from 70 weeks onward based on observed OS. Conclusions: KG has potential as a model-based early endpoint to inform decisions in cancer immunotherapy studies. Clin Cancer Res; 1-7. ©2018 AACR. ©2018 American Association for Cancer Research.

Endophytic Burkholderia fungorum DBT1 can improve phytoremediation efficiency of polycyclic aromatic hydrocarbons.

PubMed

Andreolli, Marco; Lampis, Silvia; Poli, Marika; Gullner, Gabor; Biró, Borbala; Vallini, Giovanni

2013-07-01

Burkholderia fungorum DBT1 is a bacterial strain isolated from an oil refinery discharge and capable of transforming dibenzothiophene, phenanthrene, naphthalene, and fluorene. In order to evaluate the influence of a policyclic aromatic hydrocarbon (PAH)-transforming bacterial strain on the phytoremediation of organic contaminants, B. fungorum DBT1 was inoculated into hybrid poplar (Populus deltoides×Populus nigra). The poplar plants were grown for 18-wk with or without naphthalene, phenanthrene, fluorene and dibenzothiophene (488mgkg(-1) soil each) in non-sterile sand-peat substrate. Evidences were gained that B. fungorum DBT1 was present in high concentration in poplar root tissues (2.9-9.5×10(3)CFUg(-1)), while the strain was not detected in stem, leaves and rhizosphere. When poplar was planted in uncontaminated substrate, the infection caused negative effects on biomass index, leaves and stem dry weight, without showing however any disease symptoms. On the other hand, plants inoculated with the strain DBT1 resulted in better tolerance against the toxic effects of PAHs, in terms of root dry weight. Although the presence of plants acted as the main effective treatment for PAH dissipation (82-87%), the inoculum with DBT1 strain lead to the highest PAH abatement (up to 99%). In the present study, an environmental isolate with proper metabolic features was demonstrated to be possibly suitable as a poplar endophyte for improving microbe-assisted phytoremediation in PAH contaminated matrices. Copyright © 2013 Elsevier Ltd. All rights reserved.

Uptake and Translocation of Lesser-Chlorinated Polychlorinated Biphenyls (PCBs) in Whole Hybrid Poplar Plants after Hydroponic Exposure

PubMed Central

Liu, Jiyan; Schnoor, Jerald L.

2009-01-01

Mono-, di-, tri-, and tetra-chlorinated polychlorinated biphenyls (PCBs) are congeners with greater volatility which remain in air, soils and sediments requiring treatment. In this study, the fate of these PCBs was investigated within whole poplar plants (Populus deltoides x nigra, DN34) with application for a treatment system such as a confined disposal facility for dredged material. Whole hybrid poplars were exposed hydroponically to a mixture of five congeners, common in the environment, having one to four chlorine atoms per molecule. Results indicated that PCB 3, 15, 28, 52, and 77 were initially sorbed to the root systems. The Root Concentration Factor (RCF) of PCBs during the exposure was calculated and correlated with Kow. PCB congeners were taken up by the roots of hybrid poplar, and the translocation of PCBs to stems was inversely related to congener hydrophobicity (Log Kow). PCB 3 and 15 were translocated to the upper stem at small but significant rates. PCB 28 was translocated to the wood of the main stem but no farther; translocation from the roots was not detected for PCB 52 and 77. The distribution of PCBs within poplars was determined, and mass balances were completed to within 15% for each chemical except for PCB 3, the most volatile congener. This is the first report on the transport of PCBs through whole plants designed for use in treatment at disposal facilities. PMID:18793792

Poplar PtabZIP1-like enhances lateral root formation and biomass growth under drought stress

DOE PAGES

Dash, Madhumita; Yordanov, Yordan S.; Georgieva, Tatyana; ...

2017-02-10

Developing drought-resistance varieties is a major goal for bioenergy crops, such as poplar (Populus), which will be grown on marginal lands with little or no water input. Root architecture can affect drought resistance, but few genes that affect root architecture in relation to water availability have been identified. Here in this study, using activation tagging in the prime bioenergy crop poplar, we have identified a mutant that overcomes the block of lateral root (LR) formation under osmotic stress. Positioning of the tag, validation of the activation and recapitulation showed that the phenotype is caused by the poplar PtabZIP1-like (PtabZIP1L) genemore » with highest homology to bZIP1 from Arabidopsis. PtabZIP1L is predominantly expressed in roots, particularly in zones where lateral root primordia (LRP) initiate and LR differentiate and emerge. Transgenics overexpressing PtabZIP1L showed precocious LRP and LR development, while PtabZIP1L suppression significantly delayed both LRP and LR formation. Transgenic overexpression and suppression of PtabZIP1L also resulted in modulation of key metabolites like proline, asparagine, valine and several flavonoids. Consistently, expression of both of the poplar Proline Dehydrogenase orthologs and two of the Flavonol Synthases genes was also increased and decreased in overexpressed and suppressed transgenics, respectively. These findings suggest that PtabZIP1L mediates LR development and drought resistance through modulation of multiple metabolic pathways.« less

Flavan-3-ols Are an Effective Chemical Defense against Rust Infection1[OPEN

PubMed Central

Unsicker, Sybille B.; Fellenberg, Christin; Schmidt, Axel

2017-01-01

Phenolic secondary metabolites are often thought to protect plants against attack by microbes, but their role in defense against pathogen infection in woody plants has not been investigated comprehensively. We studied the biosynthesis, occurrence, and antifungal activity of flavan-3-ols in black poplar (Populus nigra), which include both monomers, such as catechin, and oligomers, known as proanthocyanidins (PAs). We identified and biochemically characterized three leucoanthocyanidin reductases and two anthocyanidin reductases from P. nigra involved in catalyzing the last steps of flavan-3-ol biosynthesis, leading to the formation of catechin [2,3-trans-(+)-flavan-3-ol] and epicatechin [2,3-cis-(−)-flavan-3-ol], respectively. Poplar trees that were inoculated with the biotrophic rust fungus (Melampsora larici-populina) accumulated higher amounts of catechin and PAs than uninfected trees. The de novo-synthesized catechin and PAs in the rust-infected poplar leaves accumulated significantly at the site of fungal infection in the lower epidermis. In planta concentrations of these compounds strongly inhibited rust spore germination and reduced hyphal growth. Poplar genotypes with constitutively higher levels of catechin and PAs as well as hybrid aspen (Populus tremula × Populus alba) overexpressing the MYB134 transcription factor were more resistant to rust infection. Silencing PnMYB134, on the other hand, decreased flavan-3-ol biosynthesis and increased susceptibility to rust infection. Taken together, our data indicate that catechin and PAs are effective antifungal defenses in poplar against foliar rust infection. PMID:29070515

Flavan-3-ols Are an Effective Chemical Defense against Rust Infection.

PubMed

Ullah, Chhana; Unsicker, Sybille B; Fellenberg, Christin; Constabel, C Peter; Schmidt, Axel; Gershenzon, Jonathan; Hammerbacher, Almuth

2017-12-01

Phenolic secondary metabolites are often thought to protect plants against attack by microbes, but their role in defense against pathogen infection in woody plants has not been investigated comprehensively. We studied the biosynthesis, occurrence, and antifungal activity of flavan-3-ols in black poplar ( Populus nigra ), which include both monomers, such as catechin, and oligomers, known as proanthocyanidins (PAs). We identified and biochemically characterized three leucoanthocyanidin reductases and two anthocyanidin reductases from P. nigra involved in catalyzing the last steps of flavan-3-ol biosynthesis, leading to the formation of catechin [2,3-trans-(+)-flavan-3-ol] and epicatechin [2,3-cis-(-)-flavan-3-ol], respectively. Poplar trees that were inoculated with the biotrophic rust fungus ( Melampsora larici-populina ) accumulated higher amounts of catechin and PAs than uninfected trees. The de novo-synthesized catechin and PAs in the rust-infected poplar leaves accumulated significantly at the site of fungal infection in the lower epidermis. In planta concentrations of these compounds strongly inhibited rust spore germination and reduced hyphal growth. Poplar genotypes with constitutively higher levels of catechin and PAs as well as hybrid aspen ( Populus tremula × Populus alba ) overexpressing the MYB134 transcription factor were more resistant to rust infection. Silencing PnMYB134 , on the other hand, decreased flavan-3-ol biosynthesis and increased susceptibility to rust infection. Taken together, our data indicate that catechin and PAs are effective antifungal defenses in poplar against foliar rust infection. © 2017 American Society of Plant Biologists. All Rights Reserved.

Poplar PtabZIP1-like enhances lateral root formation and biomass growth under drought stress

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dash, Madhumita; Yordanov, Yordan S.; Georgieva, Tatyana

Developing drought-resistance varieties is a major goal for bioenergy crops, such as poplar (Populus), which will be grown on marginal lands with little or no water input. Root architecture can affect drought resistance, but few genes that affect root architecture in relation to water availability have been identified. Here in this study, using activation tagging in the prime bioenergy crop poplar, we have identified a mutant that overcomes the block of lateral root (LR) formation under osmotic stress. Positioning of the tag, validation of the activation and recapitulation showed that the phenotype is caused by the poplar PtabZIP1-like (PtabZIP1L) genemore » with highest homology to bZIP1 from Arabidopsis. PtabZIP1L is predominantly expressed in roots, particularly in zones where lateral root primordia (LRP) initiate and LR differentiate and emerge. Transgenics overexpressing PtabZIP1L showed precocious LRP and LR development, while PtabZIP1L suppression significantly delayed both LRP and LR formation. Transgenic overexpression and suppression of PtabZIP1L also resulted in modulation of key metabolites like proline, asparagine, valine and several flavonoids. Consistently, expression of both of the poplar Proline Dehydrogenase orthologs and two of the Flavonol Synthases genes was also increased and decreased in overexpressed and suppressed transgenics, respectively. These findings suggest that PtabZIP1L mediates LR development and drought resistance through modulation of multiple metabolic pathways.« less

Comparative mapping in the Fagaceae and beyond with EST-SSRs

PubMed Central

2012-01-01

Background Genetic markers and linkage mapping are basic prerequisites for comparative genetic analyses, QTL detection and map-based cloning. A large number of mapping populations have been developed for oak, but few gene-based markers are available for constructing integrated genetic linkage maps and comparing gene order and QTL location across related species. Results We developed a set of 573 expressed sequence tag-derived simple sequence repeats (EST-SSRs) and located 397 markers (EST-SSRs and genomic SSRs) on the 12 oak chromosomes (2n = 2x = 24) on the basis of Mendelian segregation patterns in 5 full-sib mapping pedigrees of two species: Quercus robur (pedunculate oak) and Quercus petraea (sessile oak). Consensus maps for the two species were constructed and aligned. They showed a high degree of macrosynteny between these two sympatric European oaks. We assessed the transferability of EST-SSRs to other Fagaceae genera and a subset of these markers was mapped in Castanea sativa, the European chestnut. Reasonably high levels of macrosynteny were observed between oak and chestnut. We also obtained diversity statistics for a subset of EST-SSRs, to support further population genetic analyses with gene-based markers. Finally, based on the orthologous relationships between the oak, Arabidopsis, grape, poplar, Medicago, and soybean genomes and the paralogous relationships between the 12 oak chromosomes, we propose an evolutionary scenario of the 12 oak chromosomes from the eudicot ancestral karyotype. Conclusions This study provides map locations for a large set of EST-SSRs in two oak species of recognized biological importance in natural ecosystems. This first step toward the construction of a gene-based linkage map will facilitate the assignment of future genome scaffolds to pseudo-chromosomes. This study also provides an indication of the potential utility of new gene-based markers for population genetics and comparative mapping within and beyond the Fagaceae. PMID:22931513

Nitrogen nutrition of poplar trees.

PubMed

Rennenberg, H; Wildhagen, H; Ehlting, B

2010-03-01

Many forest ecosystems have evolved at sites with growth-limiting nitrogen (N) availability, low N input from external sources and high ecosystem internal cycling of N. By contrast, many poplar species are frequent constituents of floodplain forests where they are exposed to a significant ecosystem external supply of N, mainly nitrate, in the moving water table. Therefore, nitrate is much more important for N nutrition of these poplar species than for many other tree species. We summarise current knowledge of nitrate uptake and its regulation by tree internal signals, as well as acquisition of ammonium and organic N from the soil. Unlike herbaceous plants, N nutrition of trees is sustained by seasonal, tree internal cycling. Recent advances in the understanding of seasonal storage and mobilisation in poplar bark and regulation of these processes by temperature and daylength are addressed. To explore consequences of global climate change on N nutrition of poplar trees, responses of N uptake and metabolism to increased atmospheric CO(2) and O(3) concentrations, increased air and soil temperatures, drought and salt stress are highlighted.

Comparative study of plant growth of two poplar tree species irrigated with treated wastewater, with particular reference to accumulation of heavy metals (Cd, Pb, As, and Ni).

PubMed

Houda, Zarati; Bejaoui, Zoubeir; Albouchi, Ali; Gupta, Dharmendra K; Corpas, Francisco J

2016-02-01

Water is a scarce natural resource around the world which can hamper the socio-economic development of many countries. The Mediterranean area, especially north Africa, is known for its semi-arid to arid climate, causing serious water supply problems. Treated wastewater (TWW) is being used as an alternative strategy for recycling wastewater. It is also a potential source of nutrients for reforestation with certain plant species such as poplar trees, a useful wood resource, and even for phytoremediation purposes. In the present study, we used treated wastewater to irrigate two clones of 1-year-old poplar trees (Populus nigra cv. I-488 and Populus alba cv. MA-104) for 90 days. After a stipulated time, a comparative study was made of the effects of TWW on growth parameters, acquisition of essential minerals (Na, Fe and Zn) and pollutants (Cd, Pb, As and Ni) as well as the enrichment of secondary metabolites such as polyphenolic, flavonoid and tannin compounds which could contribute to the growth and development of poplar plants. The results of this study show that the use of TWW increased P. alba's biomass production by 36% and also enhanced its Cd and Pb accumulation capacity. We also found that P. alba has considerable potential to be used as an alternative plant species for reforestation and/or phytoremediation of toxic metals from contaminated water or effluent.

Modelling impacts of second generation bioenergy production on Ecosystem Services in Europe

NASA Astrophysics Data System (ADS)

Henner, D. N.; Smith, P.; Davies, C.; McNamara, N. P.

2016-12-01

Bioenergy crops are an important source of renewable energy and likely to play a major role in transitioning to a lower CO2 energy system. There is, however, uncertainty about the impacts of the growth of bioenergy crops on broader sustainability encompassed by ecosystem services, further enhanced by ongoing climate change. The goal of this project is to develop a comprehensive model that covers ecosystem services at a continental scale including biodiversity and pollination, water and air security, erosion control and soil security, GHG emissions, soil C and cultural services like tourism value. The technical distribution potential and likely yield of second generation energy crops, such as Miscanthus, Short Rotation Coppice (SRC; willow and poplar) was modelled using ECOSSE, DayCent, SalixFor and MiscanFor models. In addition, methods like water footprint tools, tourism value maps and ecosystem valuation tools and models are utilised. We will present results for synergies and trade-offs between land use change and ecosystem services, impact on food security and land management. Further, we will show modelled yield maps for different cultivars of Miscanthus, willow and poplar in Europe and constraint/opportunity maps based on projected yield and other factors e.g. total economic value, technical potential, current land use, climate change and trade-offs and synergies. It will be essential to include multiple ecosystem services when assessing the potential for bioenergy production/expansion that does not impact other land uses or provisioning services. Considering that the soil GHG balance is dominated by change in soil organic carbon (SOC) and the difference among Miscanthus and SRC is largely determined by yield, an important target for management of perennial energy crops is to achieve the best possible yield using the most appropriate energy crop and cultivar for the local situation. This research could inform future policy decisions on bioenergy crops in Europe.

Response of ecosystem carbon fluxes to drought events in a poplar plantation in Northern China

Treesearch

Jie Zhou; Zhiqiang Zhang; Ge Sun; Xianrui Fang; Tonggang Zha; Steve McNulty; Jiquan Chen; Ying Jin; Asko Noormets

2013-01-01

Poplar plantations are widely used for timber production and ecological restoration in northern China,a region that experiences frequent droughts and water scarcity. An open-path eddy-covariance (EC)system was used to continuously measure the carbon,water,and energy fluxes in a poplar plantation during the growing season (i.e., April–October)over the period 2006–2008...

To Make Long Character-Marked Cuttings From Low-Grade Yellow-Poplar Lumber - Rip First

Treesearch

Philip A. Araman

1979-01-01

Long, character-marked furniture cuttings are easily obtained when low-grade (2A and 2B Common) yellow-poplar lumber is first ripped into strips and then crosscut to remove objectionable defects. Overall yields of character-marked material using this procedure were 78% from 1 Common and 2A Common and 70% from 2B Common yellow-poplar lumber. Furthermore, 82% of the 1...

Antibiofilm and Antioxidant Activity of Propolis and Bud Poplar Resins versus Pseudomonas aeruginosa

PubMed Central

De Marco, Stefania; Piccioni, Miranda; Pagiotti, Rita

2017-01-01

Pseudomonas aeruginosa is a common biofilm-forming bacterial pathogen implicated in lung, skin, and systemic infections. Biofilms are majorly associated with chronic lung infection, which is the most severe complication in cystic fibrosis patients characterized by drug-resistant biofilms in the bronchial mucus with zones, where reactive oxygen species concentration is increased mainly due to neutrophil activity. Aim of this work is to verify the anti-Pseudomonas property of propolis or bud poplar resins extracts. The antimicrobial activity of propolis and bud poplar resins extracts was determined by MIC and biofilm quantification. Moreover, we tested the antioxidant activity by DPPH and neutrophil oxidative burst assays. In the end, both propolis and bud poplar resins extracts were able to inhibit P. aeruginosa biofilm formation and to influence both swimming and swarming motility. Moreover, the extracts could inhibit proinflammatory cytokine production by human PBMC and showed both direct and indirect antioxidant activity. This work is the first to demonstrate that propolis and bud poplar resins extracts can influence biofilm formation of P. aeruginosa contrasting the inflammation and the oxidation state typical of chronic infection suggesting that propolis or bud poplar resins can be used along with antibiotic as adjuvant in the therapy against P. aeruginosa infections related to biofilm. PMID:28127379

Fast enhancement on hydrophobicity of poplar wood surface using low-pressure dielectric barrier discharges (DBD) plasma

NASA Astrophysics Data System (ADS)

Chen, Weimin; Zhou, Xiaoyan; Zhang, Xiaotao; Bian, Jie; Shi, Shukai; Nguyen, Thiphuong; Chen, Minzhi; Wan, Jinglin

2017-06-01

The hydrophilicity of woody products leads to deformation and cracks, which greatly limits its applications. Low-pressure dielectric barrier discharge (DBD) plasma using hexamethyldisiloxane was applied in poplar wood surface to enhance the hydrophobicity. The chemical properties, micro-morphology, and contact angles of poplar wood surface before and after plasma treatment were investigated by attenuated total reflectance Fourier transform infrared spectroscopy (ATR-FTIR), x-ray photoelectron spectroscopy (XPS), scanning electron microscope and energy dispersive analysis of X-ray (SEM-EDX), atomic force microscopy (AFM), and optical contact angle measurement (OCA). Moreover, tinfoil film was used as the base to reveal the enhancement mechanism. The results showed that hexamethyldisiloxane monomer is first broken into several fragments with active sites and hydrophobic chemical groups. Meanwhile, plasma treatment results in the formation of free radicals and active sites in the poplar wood surface. Then, the fragments are reacted with free radicals and incorporated into the active sites to form a network structure based on the linkages of Si-O-Si and Sisbnd Osbnd C. Plasma treatment also leads to the formation of acicular nano-structure in poplar wood surface. These facts synergistically enhance the hydrophobicity of poplar wood surface, demonstrating the dramatically increase in the equilibrium contact angle by 330%.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Strauss, Steve; Shevchenko, Olga; Ma, Caiping

The overall goal of this project was to develop and validate sterility systems in poplar with the ultimate goal of fulfilling the basic requirements for commercial use. For this, sterility must be complete and stable over multiple growing seasons, cause no detrimental effects on vegetative growth, and successful transformation events must be identifiable via molecular tests when trees are still juvenile. Because of the inherent difficulties in achieving and demonstrating complete sterility in trees, our approach was to study alternate sterility systems in Arabidopsis and/or early-flowering tree systems. The public benefit from this work is the capacity for containment ofmore » genes or exotic forms of trees so they can be of benefit for industry for production of wood, energy, and renewable products, while having minimal impact on wild populations of trees. We tested three methods for engineering sterility: dominant negative mutant (DNM) proteins, floral tissue ablation, and RNA interference (RNAi) to suppress the expression of several floral regulatory genes. The ultimate goal of this work was to produce a number of transgenic poplars that could be outplanted to enable future assessments of the effectiveness of these transgenic sterility methods. Our attempts to produce ablation constructs that did not interfere with tree health were partially successful. Using the poplar LEAFY gene promoter and the barnase/barstar system, we were able to regenerate plants that grew well in the greenhouse, but they showed poor health in the field. Four of seven DNM genes tested were considered promising enough, based on results in Arabidopsis, to produce transgenic poplars. Single, double, and triple RNAi genes were produced and transformed into poplar. Over all, we produced 1,964 PCR-confirmed transgenic events with 19 different kinds of sterility genes and several kinds of control genes. We propagated 5,640, 6,820, and 7,055 trees for each of three test poplar genotypes, and field plantings were begun in Spring of 2003 and will be finished in Spring 2007. Continued field studies and monitoring will be required to establish if any of the approaches we have taken will prove to be safe for tree health, stable, and provide reliable containment.« less

Spatio-temporal Variability of Stemflow Volume in a Beech-Yellow Poplar Forest in Relation to Tree Species and Size

NASA Astrophysics Data System (ADS)

Levia, D. F.; van Stan, J. T.; Mage, S.; Hauske, P. W.

2009-05-01

Stemflow is a localized point input at the base of trees that can account for more than 10% of the incident gross precipitation in deciduous forests. Despite the fact that stemflow has been documented to be of hydropedological importance, affecting soil moisture patterns, soil erosion, soil chemistry, and the distribution of understory vegetation, our current understanding of the temporal variability of stemflow yield is poor. The aim of the present study, conducted in a beech-yellow poplar forest in northeastern Maryland (39°42'N, 75°50'W), was to better understand the temporal and variability of stemflow production from Fagus grandifolia Ehrh. (American beech) and Liriodendron tulipifera L. (yellow poplar) in relation to meteorological conditions and season in order to better assess its importance to canopy-soil interactions. The experimental plot had a stand density of 225 trees/ha, a stand basal area of 36.8 sq. m/ha, a mean dbh of 40.8 cm, and a mean tree height of 27.8 m. The stand leaf area index (LAI) is 5.3. Yellow poplar and beech constitute three- quarters of the stand basal area. Using a high resolution (5 min) sequential stemflow sampling network, consisting of tipping-bucket gauges interfaced with a Campbell CR1000 datalogger, the temporal variability of stemflow yield was examined. Beech produced significantly larger stemflow amounts than yellow poplar. The amount of stemflow produced by individual beech trees in 5 minute intervals reached three liters. Stemflow yield and funneling ratios decreased with increasing rain intensity. Temporal variability of stemflow inputs were affected by the nature of incident gross rainfall, season, tree species, tree size, and bark water storage capacity. Stemflow was greater during the leafless period than full leaf period. Stemflow yield was greater for larger beech trees and smaller yellow poplar trees, owing to differences in bark water storage capacity. The findings of this study indicate that stemflow has a detectable affect on soil moisture patterning and the hydraulic conductivity of forest soils.

Characterization of an apple TT2-type R2R3 MYB transcription factor functionally similar to the poplar proanthocyanidin regulator PtMYB134.

PubMed

Gesell, Andreas; Yoshida, Kazuko; Tran, Lan T; Constabel, C Peter

2014-09-01

The apple MdMYB9 gene encodes a positive regulator of proanthocyanidin synthesis that activates anthocyanidin reductase promoters from apple and poplar via interaction with basic helix-loop-helix proteins. The regulation of proanthocyanidins (PAs, condensed tannins) is of great importance in food plants due to the many benefits of PAs in the human diet. Two candidate flavonoid MYB regulators, MdMYB9 and MdMYB11, were cloned from apple (Malus × domestica) based on their similarity to known MYB PA regulators. Transcript accumulation of both MdMYB9 and MdMYB11 was induced by high light and wounding, similar to the poplar (Populus spp) PA regulator PtMYB134. In transient activation assays with various basic helix-loop-helix (bHLH) co-regulators, MdMYB9 activated apple and poplar anthocyanidin reductase (ANR) promoters, while MdMYB11 showed no activity. Potential transcription factor binding elements were found within several ANR promoters, and the importance of the bHLH binding site (E-box) on ANR promoter activation was demonstrated via mutational analysis. The ability of MdMYB9 and PtMYB134 to reciprocally activate ANR promoters from both apple and poplar and to partner with heterologous bHLH co-factors from these plants confirms the high degree of conservation of PA regulatory complexes across species. The similarity in apple and poplar PA regulation suggests that regulatory genes from poplar could be effectively employed for metabolic engineering of the PA pathway in apple.

Genome Sequence of the Plant Growth Promoting Endophytic Bacterium Enterobacter sp. 638

DOE Office of Scientific and Technical Information (OSTI.GOV)

Taghavi, S.; van der Lelie, D.; Hoffman, A.

2010-05-13

Enterobacter sp. 638 is an endophytic plant growth promoting gamma-proteobacterium that was isolated from the stem of poplar (Populus trichocarpa x deltoides cv. H11-11), a potentially important biofuel feed stock plant. The Enterobacter sp. 638 genome sequence reveals the presence of a 4,518,712 bp chromosome and a 157,749 bp plasmid (pENT638-1). Genome annotation and comparative genomics allowed the identification of an extended set of genes specific to the plant niche adaptation of this bacterium. This includes genes that code for putative proteins involved in survival in the rhizosphere (to cope with oxidative stress or uptake of nutrients released by plantmore » roots), root adhesion (pili, adhesion, hemagglutinin, cellulose biosynthesis), colonization/establishment inside the plant (chemiotaxis, flagella, cellobiose phosphorylase), plant protection against fungal and bacterial infections (siderophore production and synthesis of the antimicrobial compounds 4-hydroxybenzoate and 2-phenylethanol), and improved poplar growth and development through the production of the phytohormones indole acetic acid, acetoin, and 2,3-butanediol. Metabolite analysis confirmed by quantitative RT-PCR showed that, the production of acetoin and 2,3-butanediol is induced by the presence of sucrose in the growth medium. Interestingly, both the genetic determinants required for sucrose metabolism and the synthesis of acetoin and 2,3-butanediol are clustered on a genomic island. These findings point to a close interaction between Enterobacter sp. 638 and its poplar host, where the availability of sucrose, a major plant sugar, affects the synthesis of plant growth promoting phytohormones by the endophytic bacterium. The availability of the genome sequence, combined with metabolome and transcriptome analysis, will provide a better understanding of the synergistic interactions between poplar and its growth promoting endophyte Enterobacter sp. 638. This information can be further exploited to improve establishment and sustainable production of poplar as an energy feedstock on marginal, non-agricultural soils using endophytic bacteria as growth promoting agents. Poplar is considered as the model tree species for the production of lignocellulosic biomass destined for biofuel production. The plant growth promoting endophytic bacterium Enterobacter sp. 638 can improve the growth of poplar on marginal soils by as much as 40%. This prompted us to sequence the genome of this strain and, via comparative genomics, identify functions essential for the successful colonization and endophytic association with its poplar host. Analysis of the genome sequence, combined with metabolite analysis and quantitative PCR, pointed to a remarkable interaction between Enterobacter sp. 638 and its poplar host with the endophyte responsible for the production of a phytohormone, and a precursor for another that poplar is unable to synthesize, and where the production of the plant growth promoting compounds depended on the presence of plant synthesized compounds, such as sucrose, in the growth medium. Our results provide the basis to better understanding the synergistic interactions between poplar and Enterobacter sp. 638. This information can be further exploited to improve establishment and sustainable production of poplar on marginal, non-agricultural soils using endophytic bacteria such as Enterobacter sp. 638 as growth promoting agents.« less

Impacts of supplyshed-level differences in productivity and land Costs on the economics of hybrid poplar production in Minnesota, USA

Treesearch

William Lazarus; William L. Headlee; Ronald S. Zalesny

2015-01-01

The joint effects of poplar biomass productivity and land costs on poplar production economics were compared for 12 Minnesota counties and two genetic groups, using a process-based model (3-PG) to estimate productivity. The counties represent three levels of productivity and a range of land costs (annual rental rates) from $128/ha to $534/ha. An optimal rotation age...

Natural acetylation impacts carbohydrate recovery during deconstruction of Populus trichocarpa wood

DOE Office of Scientific and Technical Information (OSTI.GOV)

Johnson, Amanda M.; Kim, Hoon; Ralph, John

Significant variation in the inherent degree of acetylation naturally exists in the xylem cell walls of Populus trichocarpa. During pretreatment, endogenous acetate hydrolyzes to acetic acid that can subsequently catalyze the breakdown of poplar wood, increasing the efficiency of biomass pretreatment. Poplar genotypes varying in cell wall composition were pretreated in 0.3% H 2SO 4 in non-isothermal batch reactors. Acetic acid released from the wood was positively related to sugar release during pretreatment ( R ≥ 0.9), and inversely proportional to the lignin content of the poplar wood ( R = 0.6). There is significant variation in wood chemistry amongmore » P. trichocarpa genotypes. As a result, this study elucidated patterns of cell wall deconstruction and clearly links carbohydrate solubilization to acetate release. Tailoring biomass feedstocks for acetate release could enhance pretreatment efficiencies.« less

Overexpression of PtABCC1 contributes to mercury tolerance and accumulation in Arabidopsis and poplar.

PubMed

Sun, Liping; Ma, Yifeng; Wang, Huihong; Huang, Weipeng; Wang, Xiaozhu; Han, Li; Sun, Wanmei; Han, Erqin; Wang, Bangjun

2018-03-18

Mercury (Hg) is a highly biotoxic heavy metal that contaminates the environment. Phytoremediation is a green technology for environmental remediation and is used to clean up Hg contaminated soil in recent years. In this study, we isolated an ATP-binding cassette (ABC) transporter gene PtABCC1 from Populus trichocarpa and overexpressed it in Arabidopsis and poplar. The transgenic plants conferred higher Hg tolerance than wild type (WT) plants, and overexpression of PtABCC1 could lead to 26-72% or 7-160% increase of Hg accumulation in Arabidopsis or poplar plants, respectively. These results demonstrated that PtABCC1 plays a crucial role in enhancing tolerance and accumulation to Hg in plants, which provides a promising way for phytoremediation of Hg contamination. Copyright © 2018 Elsevier Inc. All rights reserved.

Cometabolic degradation of trichloroethylene by Burkholderia cepacia G4 with poplar leaf homogenate.

PubMed

Kang, Jun Won; Doty, Sharon Lafferty

2014-07-01

Trichloroethylene (TCE), a chlorinated organic solvent, is one of the most common and widespread groundwater contaminants worldwide. Among the group of TCE-degrading aerobic bacteria, Burkholderia cepacia G4 is the best-known representative. This strain requires the addition of specific substrates, including toluene, phenol, and benzene, to induce the enzymes to degrade TCE. However, the substrates are toxic and introducing them into the soil can result in secondary contamination. In this study, poplar leaf homogenate containing natural phenolic compounds was tested for the ability to induce the growth of and TCE degradation by B. cepacia G4. The results showed that the G4 strain could grow and degrade TCE well with the addition of phytochemicals. The poplar leaf homogenate also functioned as an inducer of the toluene-ortho-monooxygenase (TOM) gene in B. cepacia G4.

Natural acetylation impacts carbohydrate recovery during deconstruction of Populus trichocarpa wood

DOE PAGES

Johnson, Amanda M.; Kim, Hoon; Ralph, John; ...

2017-02-23

Significant variation in the inherent degree of acetylation naturally exists in the xylem cell walls of Populus trichocarpa. During pretreatment, endogenous acetate hydrolyzes to acetic acid that can subsequently catalyze the breakdown of poplar wood, increasing the efficiency of biomass pretreatment. Poplar genotypes varying in cell wall composition were pretreated in 0.3% H 2SO 4 in non-isothermal batch reactors. Acetic acid released from the wood was positively related to sugar release during pretreatment ( R ≥ 0.9), and inversely proportional to the lignin content of the poplar wood ( R = 0.6). There is significant variation in wood chemistry amongmore » P. trichocarpa genotypes. As a result, this study elucidated patterns of cell wall deconstruction and clearly links carbohydrate solubilization to acetate release. Tailoring biomass feedstocks for acetate release could enhance pretreatment efficiencies.« less

Genetical genomics of Populus leaf shape variation

DOE PAGES

Drost, Derek R.; Puranik, Swati; Novaes, Evandro; ...

2015-06-30

Leaf morphology varies extensively among plant species and is under strong genetic control. Mutagenic screens in model systems have identified genes and established molecular mechanisms regulating leaf initiation, development, and shape. However, it is not known whether this diversity across plant species is related to naturally occurring variation at these genes. Quantitative trait locus (QTL) analysis has revealed a polygenic control for leaf shape variation in different species suggesting that loci discovered by mutagenesis may only explain part of the naturally occurring variation in leaf shape. Here we undertook a genetical genomics study in a poplar intersectional pseudo-backcross pedigree tomore » identify genetic factors controlling leaf shape. Here, the approach combined QTL discovery in a genetic linkage map anchored to the Populus trichocarpa reference genome sequence and transcriptome analysis.« less

Response to Crop-Tree Release: Sugar Maple, Red Oak, Black Cherry, and Yellow-Poplar Saplings in a 9-Year-Old Stand

Treesearch

Neil I. Lamson; H. Clay Smith

1978-01-01

Crop trees were released in an Appalachian hardwood stand (site index 70 for northern red oak) that had been clearcut 9 years earlier. We released 134 yellow-poplar, red oak, black cherry, and sugar maple stems of seedling origin to a 5-foot radius around the bole of each study tree; 140 comparable stems were not released. These trees were dominant, codominant, or...

Phenylalanine as a nitrogen source induces root growth and nitrogen-use efficiency in Populus × canescens.

PubMed

Jiao, Yu; Chen, Yinghao; Ma, Chaofeng; Qin, Jingjing; Nguyen, Thi Hong Nhung; Liu, Di; Gan, Honghao; Ding, Shen; Luo, Zhi-Bin

2018-01-01

To investigate the physiological responses of poplars to amino acids as sole nitrogen (N) sources, Populus × canescens (Ait.) Smith plants were supplied with one of three nitrogen fertilizers (NH4NO3, phenylalanine (Phe) or the mixture of NH4NO3 and Phe) in sand culture. A larger root system, and decreased leaf size and CO2 assimilation rate was observed in Phe- versus NH4NO3-treated poplars. Consistently, a greater root biomass and a decreased shoot growth were detected in Phe-supplied poplars. Decreased enzymatic activities of nitrate reductase (NR), glutamate synthase (GOGAT) and glutamate dehydrogenase (GDH) and elevated activities of nitrite reductase (NiR), phenylalanine ammonia lyase (PAL), glutamine synthetase (GS) and asparagine synthase (AS) were found in Phe-treated roots. Accordingly, reduced concentrations of NH4+, NO3- and total N, and enhanced N-use efficiencies (NUEs) were detected in Phe-supplied poplars. Moreover, the transcript levels of putative Phe transporters ANT1 and ANT3 were upregulated, and the mRNA levels of NR, glutamine synthetase 2 (GS2), NADH-dependent glutamate synthase (NADH-GOGAT), GDH and asparagine synthetase 2 (ASN2) were downexpressed in Phe-treated roots and/or leaves. The 15N-labeled Phe was mainly allocated in the roots and only a small amount of 15N-Phe was translocated to poplar aerial parts. These results indicate that poplar roots can acquire Phe as an N source to support plant growth and that Phe-induced NUEs in the poplars are probably associated with NH4+ re-utilization after Phe deamination and the carbon bonus simultaneously obtained during Phe uptake. © The Author 2017. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Functional analyses of PtRDM1 gene overexpression in poplars and evaluation of its effect on DNA methylation and response to salt stress.

PubMed

Movahedi, Ali; Zhang, Jiaxin; Sun, Weibo; Mohammadi, Kourosh; Almasi Zadeh Yaghuti, Amir; Wei, Hui; Wu, Xiaolong; Yin, Tongming; Zhuge, Qiang

2018-06-01

Epigenetic modification by DNA methylation is necessary for all cellular processes, including genetic expression events, DNA repair, genomic imprinting and regulation of tissue development. It occurs almost exclusively at the C5 position of symmetric CpG and asymmetric CpHpG and CpHpH sites in genomic DNA. The RNA-directed DNA methylation (RDM1) gene is crucial for heterochromatin and DNA methylation. We overexpressed PtRDM1 gene from Populus trichocarpa to amplify transcripts of orthologous RDM1 in 'Nanlin895' (P. deltoides × P. euramericana 'Nanlin895'). This overexpression resulted in increasing RDM1 transcript levels: by ∼150% at 0 mM NaCl treatment and by ∼300% at 60 mM NaCl treatment compared to WT (control) poplars. Genomic cytosine methylation was monitored within 5.8S rDNA and histone H3 loci by bisulfite sequencing. In total, transgenic poplars revealed more DNA methylation than WT plants. In our results, roots revealed more methylated CG contexts than stems and leaves whereas, histone H3 presented more DNA methylation than 5.8S rDNA in both WT and transgenic poplars. The NaCl stresses enhanced more DNA methylation in transgenic poplars than WT plants through histone H3 and 5.8 rDNA loci. Also, the overexpression of PtRDM1 resulted in hyper-methylation, which affected plant phenotype. Transgenic poplars revealed significantly more regeneration of roots than WT poplars via NaCl treatments. Our results proved that RDM1 protein enhanced the DNA methylation by chromatin remodeling (e.g. histone H3) more than repetitive DNA sequences (e.g. 5.8S rDNA). Copyright © 2018 Elsevier Masson SAS. All rights reserved.

Ecophysiological Competence of Populus alba L., Fraxinus angustifolia Vahl., and Crataegus monogyna Jacq. Used in Plantations for the Recovery of Riparian Vegetation

NASA Astrophysics Data System (ADS)

Manzanera, Jose A.; Martínez-Chacón, Maria F.

2007-12-01

In many semi-arid environments of Mediterranean ecosystems, white poplar ( Populus alba L.) is the dominant riparian tree and has been used to recover degraded areas, together with other native species, such as ash ( Fraxinus angustifolia Vahl.) and hawthorn ( Crataegus monogyna Jacq.). We addressed three main objectives: (1) to gain an improved understanding of some specific relationships between environmental parameters and leaf-level physiological factors in these riparian forest species, (2) to compare the leaf-level physiology of these riparian species to each other, and (3) to compare leaf-level responses within native riparian plots to adjacent restoration plots, in order to evaluate the competence of the plants used for the recovery of those degraded areas. We found significant differences in physiological performance between mature and young white poplars in the natural stand and among planted species. The net assimilation and transpiration rates, diameter, and height of white poplar plants were superior to those of ash and hawthorn. Ash and hawthorn showed higher water use efficiency than white poplar. White poplar also showed higher levels of stomatal conductance, behaving as a fast-growing, water-consuming species with a more active gas exchange and ecophysiological competence than the other species used for restoration purposes. In the restoration zones, the planted white poplars had higher rates of net assimilation and water use efficiency than the mature trees in the natural stand. We propose the use of white poplar for the rapid restoration of riparian vegetation in semi-arid Mediterranean environments. Ash and hawthorn can also play a role as accompanying species for the purpose of biodiversity.

Clinch River - Environmental Restoration Program (CR-ERP) study, Ambient water toxicity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simbeck, D.J.

1997-06-01

Clinch River - Environmental Restoration Program (CR-ERP) personnel and Tennessee Valley Authority (TVA) personnel conducted a study during the week of January 25-February 1, 1994, as described in the Statement of Work (SOW) document. The organisms specified for testing were larval fathead minnows, Pimephales promelas, and the daphnid, Ceriodaphnia dubia. Surface water samples were collected by TVA Field Engineering personnel from Clinch River Mile 9.0, Poplar Creek Mile 1.0, and Poplar Creek Mile 2.9 on January 24, 26, and 28. Samples were partitioned (split) and provided to the CR-ERP and TVA toxicology laboratories for testing. Exposure of test organisms tomore » these samples resulted in no toxicity (survival or growth) to fathead minnows; however, toxicity to daphnids (significantly reduced reproduction) was demonstrated in undiluted samples from Poplar Creek Mile 1.0 in testing conducted by TVA based on hypothesis testing of data. Point estimation (IC{sub 25}) analysis of the data, however, showed no toxicity in PCM 1.0 samples.« less

Post-treatment mechanical refining as a method to improve overall sugar recovery of steam pretreated hybrid poplar.

PubMed

Dou, Chang; Ewanick, Shannon; Bura, Renata; Gustafson, Rick

2016-05-01

This study investigates the effect of mechanical refining to improve the sugar yield from biomass processed under a wide range of steam pretreatment conditions. Hybrid poplar chips were steam pretreated using six different conditions with or without SO2. The resulting water insoluble fractions were subjected to mechanical refining. After refining, poplar pretreated at 205°C for 10min without SO2 obtained a 32% improvement in enzymatic hydrolysis and achieved similar overall monomeric sugar recovery (539kg/tonne) to samples pretreated with SO2. Refining did not improve hydrolyzability of samples pretreated at more severe conditions, nor did it improve the overall sugar recovery. By maximizing overall sugar recovery, refining could partially decouple the pretreatment from other unit operations, and enable the use of low temperature, non-sulfur pretreatment conditions. The study demonstrates the possibility of using post-treatment refining to accommodate potential pretreatment process upsets without sacrificing sugar yields. Copyright © 2016 Elsevier Ltd. All rights reserved.

Poplar trees for phytoremediation of high levels of nitrate and applications in bioenergy.

PubMed

Castro-Rodríguez, Vanessa; García-Gutiérrez, Angel; Canales, Javier; Cañas, Rafael A; Kirby, Edward G; Avila, Concepción; Cánovas, Francisco M

2016-01-01

The utilization of high amounts of nitrate fertilizers for crop yield leads to nitrate pollution of ground and surface waters. In this study, we report the assimilation and utilization of nitrate luxuriant levels, 20 times more than the highest N fertilizer application in Europe, by transgenic poplars overexpressing a cytosolic glutamine synthetase (GS1). In comparison with the wild-type controls, transgenic plants grown under high N levels exhibited increased biomass (171.6%) and accumulated higher levels of proteins, chlorophylls and total sugars such as glucose, fructose and sucrose. These plants also exhibited greater nitrogen-use efficiency particularly in young leaves, suggesting that they are able to translocate most of the resources to the above-ground part of the plant to produce biomass. The transgenic poplar transcriptome was greatly affected in response to N availability with 1237 genes differentially regulated in high N, while only 632 genes were differentially expressed in untransformed plants. Many of these genes are essential in the adaptation and response against N excess and include those involved in photosynthesis, cell wall formation and phenylpropanoid biosynthesis. Cellulose production in the transgenic plants was fivefold higher than in control plants, indicating that transgenic poplars represent a potential feedstock for applications in bioenergy. In conclusion, our results show that GS transgenic poplars can be used not only for improving growth and biomass production but also as an important resource for potential phytoremediation of nitrate pollution. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Validation of reference genes for RT-qPCR analysis in Burkholderia pyrrocinia JK-SH007.

PubMed

Wu, Bin-Yan; Ye, Jian-Ren; Huang, Lin; He, Ling-Min; Li, De-Wei

2017-01-01

Burkholderia pyrrocinia strain JK-SH007 isolated from poplar stems plays a highly significant role in the growth promotion and the biocontrol of poplar canker during colonization in poplar. In this research, the ideal reference gene was filtered and determined for the transcript normalization. Additionally, the expression of pyrG under all four conditions was relatively stable in B. pyrrocinia JK-SH007. Copyright © 2016. Published by Elsevier B.V.

Durability of structural lumber products after exposure at 82°C and 80% relative humidity

Treesearch

David W. Green; James W. Evans; Cherilyn A. Hatfield; Pamela J. Byrd

2005-01-01

Solid-sawn lumber (Douglas-fir, southern pine, Spruce–Pine–Fir, and yellow-poplar), laminated veneer lumber (Douglas-fir, southern pine, and yellow-poplar), and laminated strand lumber (aspen and yellow-poplar) were heated continuously at 82°C (180°F) and 80% relative humidity (RH) for periods of up to 24 months. The lumber was then reconditioned to room temperature at...

Improving Processing and Performance of Pure Lignin Carbon Fibers through Hardwood and Herbaceous Lignin Blends.

PubMed

Hosseinaei, Omid; Harper, David P; Bozell, Joseph J; Rials, Timothy G

2017-07-01

Lignin/lignin blends were used to improve fiber spinning, stabilization rates, and properties of lignin-based carbon fibers. Organosolv lignin from Alamo switchgrass ( Panicum virgatum ) and yellow poplar ( Liriodendron tulipifera ) were used as blends for making lignin-based carbon fibers. Different ratios of yellow poplar:switchgrass lignin blends were prepared (50:50, 75:25, and 85:15 w/w ). Chemical composition and thermal properties of lignin samples were determined. Thermal properties of lignins were analyzed using thermogravimetric analysis and differential scanning calorimetry. Thermal analysis confirmed switchgrass and yellow poplar lignin form miscible blends, as a single glass transition was observed. Lignin fibers were produced via melt-spinning by twin-screw extrusion. Lignin fibers were thermostabilized at different rates and subsequently carbonized. Spinnability of switchgrass lignin markedly improved by blending with yellow poplar lignin. On the other hand, switchgrass lignin significantly improved thermostabilization performance of yellow poplar fibers, preventing fusion of fibers during fast stabilization and improving mechanical properties of fibers. These results suggest a route towards a 100% renewable carbon fiber with significant decrease in production time and improved mechanical performance.

Improving Processing and Performance of Pure Lignin Carbon Fibers through Hardwood and Herbaceous Lignin Blends

PubMed Central

Hosseinaei, Omid; Bozell, Joseph J.; Rials, Timothy G.

2017-01-01

Lignin/lignin blends were used to improve fiber spinning, stabilization rates, and properties of lignin-based carbon fibers. Organosolv lignin from Alamo switchgrass (Panicum virgatum) and yellow poplar (Liriodendron tulipifera) were used as blends for making lignin-based carbon fibers. Different ratios of yellow poplar:switchgrass lignin blends were prepared (50:50, 75:25, and 85:15 w/w). Chemical composition and thermal properties of lignin samples were determined. Thermal properties of lignins were analyzed using thermogravimetric analysis and differential scanning calorimetry. Thermal analysis confirmed switchgrass and yellow poplar lignin form miscible blends, as a single glass transition was observed. Lignin fibers were produced via melt-spinning by twin-screw extrusion. Lignin fibers were thermostabilized at different rates and subsequently carbonized. Spinnability of switchgrass lignin markedly improved by blending with yellow poplar lignin. On the other hand, switchgrass lignin significantly improved thermostabilization performance of yellow poplar fibers, preventing fusion of fibers during fast stabilization and improving mechanical properties of fibers. These results suggest a route towards a 100% renewable carbon fiber with significant decrease in production time and improved mechanical performance. PMID:28671571

Identification of 4CL Genes in Desert Poplars and Their Changes in Expression in Response to Salt Stress.

PubMed

Zhang, Cai-Hua; Ma, Tao; Luo, Wen-Chun; Xu, Jian-Mei; Liu, Jian-Quan; Wan, Dong-Shi

2015-09-18

4-Coumarate:CoA ligase (4CL) genes are critical for the biosynthesis of plant phenylpropanoids. Here we identified 20 4CL genes in the genomes of two desert poplars (Populus euphratica and P. pruinosa) and salt-sensitive congener (P. trichocarpa), but 12 in Salix suchowensis (Salix willow). Phylogenetic analyses clustered all Salicaceae 4CL genes into two clades, and one of them (corresponding to the 4CL-like clade from Arabidopsis) showed signals of adaptive evolution, with more genes retained in Populus than Salix and Arabidopsis. We also found that 4CL12 (in 4CL-like clade) showed positive selection along the two desert poplar lineages. Transcriptional profiling analyses indicated that the expression of 4CL2, 4CL11, and 4CL12 changed significantly in one or both desert poplars in response to salt stress compared to that of in P. trichocarpa. Our results suggest that the evolution of the 4CL genes may have contributed to the development of salt tolerance in the two desert poplars.

Functional Gene Discovery and Characterization of Genes and Alleles Affecting Wood Biomass Yield and Quality in Populus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Busov, Victor

Adoption of biofuels as economically and environmentally viable alternative to fossil fuels would require development of specialized bioenergy varieties. A major goal in the breeding of such varieties is the improvement of lignocellulosic biomass yield and quality. These are complex traits and understanding the underpinning molecular mechanism can assist and accelerate their improvement. This is particularly important for tree bioenergy crops like poplars (species and hybrids from the genus Populus), for which breeding progress is extremely slow due to long generation cycles. A variety of approaches have been already undertaken to better understand the molecular bases of biomass yield andmore » quality in poplar. An obvious void in these undertakings has been the application of mutagenesis. Mutagenesis has been instrumental in the discovery and characterization of many plant traits including such that affect biomass yield and quality. In this proposal we use activation tagging to discover genes that can significantly affect biomass associated traits directly in poplar, a premier bioenergy crop. We screened a population of 5,000 independent poplar activation tagging lines under greenhouse conditions for a battery of biomass yield traits. These same plants were then analyzed for changes in wood chemistry using pyMBMS. As a result of these screens we have identified nearly 800 mutants, which are significantly (P<0.05) different when compared to wild type. Of these majority (~700) are affected in one of ten different biomass yield traits and 100 in biomass quality traits (e.g., lignin, S/G ration and C6/C5 sugars). We successfully recovered the position of the tag in approximately 130 lines, showed activation in nearly half of them and performed recapitulation experiments with 20 genes prioritized by the significance of the phenotype. Recapitulation experiments are still ongoing for many of the genes but the results are encouraging. For example, we have shown successful recapitulation for a fascilin-like gene that when overexpressed increase many biomass-yield associated traits. Genes discovered through activation tagging showed polymorphisms in P. trichocarpa association mapping population linked to the traits modified by the activation tagging. This suggests that putative alleles that are associated with improvement of the trait o interest can be discovered and used in marker associated selection. This will significantly simplify and accelerate the breeding efforts.« less

Ethanol production from poplar wood through enzymatic saccharification and fermentation by dilute acid and SPORL pretreatments

Treesearch

Z.J. Wang; J.Y. Zhu; Ronald S. Jr. Zalesny; K.F. Chen

2012-05-01

Dilute acid (DA) and Sulfite Pretreatment to Overcome Recalcitrance of Lignocelluloses (SPORL) pretreatments were directly applied to wood chips of four poplar wood samples of different genotypes (hereafter referred to as poplars; Populus tremuloides Michx. ‘native aspen collection’; Populus deltoides Bartr. ex Marsh x Populus nigra L. ‘NE222’ and ‘DN5’; P. nigra x...

Influence of brick air scrubber by-product on growth and development of corn and hybrid poplar.

PubMed

Thomas, Carla N; Bauerle, William L; Owino, Tom O; Chastain, John P; Klaine, Stephen J

2007-03-01

Studies were conducted to determine the effects of spent reagent from air pollution control scrubbers used at a brick manufacturing facility on emergence, growth, and physiological responses of corn and hybrid poplar plants. Scrubber by-product was obtained from General Shale Brick, Louisville, KY. Potting substrate was weighed and quantities of scrubber by-product were added to the substrate to obtain treatments of 0%, 6.25%, 12.5%, 25%, 50%, 75%, and 100% scrubber by-product (w:w) for the corn study. Each treatment mix was potted into nine replicate polyethylene pots and four corn seeds were sown per pot. The pots were randomized in a greenhouse at Clemson University and the number of seedlings emerging from each treatment, dark-adapted leaf chlorophyll a fluorescence, and shoot heights were measured at the end of a 21-day growth period. Then, dry shoot biomass was determined for plants from each treatment and plant tissues were analyzed for selected constituents. For the poplar study, nine-inch cuttings of hybrid poplar clone 15-29 (Populus trichocarpa x P. deltoides) and clone OP367 (P. deltoides x P. nigra) were planted in treatments of scrubber by-product-potting soil mixes of 0% , 5% , 10% , and 25% w:w. Leaf chlorophyll a fluorescence was measured over six weeks and cumulative leaf area, dry biomass, and nutrient content of tissues were determined upon harvest. Results of these studies indicate that percent seedling emergence for corn plants decreased with increasing scrubber by-product application rates. Application rates up to 12.5% scrubber by-product w:w had no adverse effect on corn seedling emergence. Shoot elongation, biomass production, and the status of the photosynthetic apparatus of the seedlings were also not severely impaired at applications below this level. A critical value of 58.2% w:w scrubber by-product was estimated to cause 25% inhibition of seedling emergence. Biomass production, cumulative leaf area, and chlorophyll a fluorescence of hybrid poplar plants were not affected by scrubber by-product applications of up to 5% w:w.

The Role of Biomass Composition and Steam Treatment on Durability of Pellets

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang, Yong; Chandra, Richard P.; Sokhansanj, Shahab

Steam treatment has been reported to improve the durability of wood pellet likely by changing the physical and chemical structures of wood particles, but published literature is inconclusive about which structure change is the major reason for enhanced durability. Here, in this paper, steam treatment was combined either with alkaline or with SO 2 to study. The solids obtained after steam treatments along with a control sample were dried and each was compacted into pellets. The pellets were then tested for durability. Steam treatment alone dominated improvements in durability. The pellet durability increased with the amount of xylose, but xylosemore » performed better in the pellet from raw poplar than did in the pellet from treated poplar. Water-soluble components contributed a maximum 4% of the durability of poplar pellets. The addition of lignin and sugars to substrates after steam treatment did not improve durability significantly. The surface modification that took place as a result of size reduction during steam treatment was the major reason, contributing about 50% of the durability of the pellet from steam-treated poplar. The acidity of steam treatment slightly affected the relative contributions of these structure changes on the durability. Lastly, the new knowledge helps tailor the chemical and/or mechanical pretreatment involved in pelleting biomass to durable pellets.« less

Overexpression of DEMETER, a DNA demethylase, promotes early apical bud maturation in poplar.

PubMed

Conde, Daniel; Moreno-Cortés, Alicia; Dervinis, Christopher; Ramos-Sánchez, José M; Kirst, Matias; Perales, Mariano; González-Melendi, Pablo; Allona, Isabel

2017-11-01

The transition from active growth to dormancy is critical for the survival of perennial plants. We identified a DEMETER-like (CsDML) cDNA from a winter-enriched cDNA subtractive library in chestnut (Castanea sativa Mill.), an economically and ecologically important species. Next, we characterized this DNA demethylase and its putative ortholog in the more experimentally tractable hybrid poplar (Populus tremula × alba), under the signals that trigger bud dormancy in trees. We performed phylogenetic and protein sequence analysis, gene expression profiling, and 5-methyl-cytosine methylation immunodetection studies to evaluate the role of CsDML and its homolog in poplar, PtaDML6. Transgenic hybrid poplars overexpressing CsDML were produced and analysed. Short days and cold temperatures induced CsDML and PtaDML6. Overexpression of CsDML accelerated short-day-induced bud formation, specifically from Stages 1 to 0. Buds acquired a red-brown coloration earlier than wild-type plants, alongside with the up-regulation of flavonoid biosynthesis enzymes and accumulation of flavonoids in the shoot apical meristem and bud scales. Our data show that the CsDML gene induces bud formation needed for the survival of the apical meristem under the harsh conditions of winter. © 2017 John Wiley & Sons Ltd.

The Role of Biomass Composition and Steam Treatment on Durability of Pellets

DOE PAGES

Tang, Yong; Chandra, Richard P.; Sokhansanj, Shahab; ...

2018-03-03

Steam treatment has been reported to improve the durability of wood pellet likely by changing the physical and chemical structures of wood particles, but published literature is inconclusive about which structure change is the major reason for enhanced durability. Here, in this paper, steam treatment was combined either with alkaline or with SO 2 to study. The solids obtained after steam treatments along with a control sample were dried and each was compacted into pellets. The pellets were then tested for durability. Steam treatment alone dominated improvements in durability. The pellet durability increased with the amount of xylose, but xylosemore » performed better in the pellet from raw poplar than did in the pellet from treated poplar. Water-soluble components contributed a maximum 4% of the durability of poplar pellets. The addition of lignin and sugars to substrates after steam treatment did not improve durability significantly. The surface modification that took place as a result of size reduction during steam treatment was the major reason, contributing about 50% of the durability of the pellet from steam-treated poplar. The acidity of steam treatment slightly affected the relative contributions of these structure changes on the durability. Lastly, the new knowledge helps tailor the chemical and/or mechanical pretreatment involved in pelleting biomass to durable pellets.« less

Mapping morphological shape as a high-dimensional functional curve

PubMed Central

Fu, Guifang; Huang, Mian; Bo, Wenhao; Hao, Han; Wu, Rongling

2018-01-01

Abstract Detecting how genes regulate biological shape has become a multidisciplinary research interest because of its wide application in many disciplines. Despite its fundamental importance, the challenges of accurately extracting information from an image, statistically modeling the high-dimensional shape and meticulously locating shape quantitative trait loci (QTL) affect the progress of this research. In this article, we propose a novel integrated framework that incorporates shape analysis, statistical curve modeling and genetic mapping to detect significant QTLs regulating variation of biological shape traits. After quantifying morphological shape via a radius centroid contour approach, each shape, as a phenotype, was characterized as a high-dimensional curve, varying as angle θ runs clockwise with the first point starting from angle zero. We then modeled the dynamic trajectories of three mean curves and variation patterns as functions of θ. Our framework led to the detection of a few significant QTLs regulating the variation of leaf shape collected from a natural population of poplar, Populus szechuanica var tibetica. This population, distributed at altitudes 2000–4500 m above sea level, is an evolutionarily important plant species. This is the first work in the quantitative genetic shape mapping area that emphasizes a sense of ‘function’ instead of decomposing the shape into a few discrete principal components, as the majority of shape studies do. PMID:28062411

Virulence of Three Cylindrocladium Species to Yellow-Poplar Seedlings

Treesearch

T. H. Filer

1970-01-01

Cylindrocladium crotalariae and C. scoparium caused severe root rot on potted yellow-poplar seedlings. They appeared to be equally virulent. C. floridanum caused necrosis only on feeder roots of the seedlings.

Effect of autohydrolysis on the wettability, absorbility and further alkali impregnation of poplar wood chips.

PubMed

Xu, Ningpan; Liu, Wei; Hou, Qingxi; Wang, Peiyun; Yao, Zhirong

2016-09-01

Autohydrolysis with different severity factors was performed on poplar wood chips prior to pulping, and the wettability, absorbility and the following impregnation of NaOH solution for the poplar wood chips were then investigated. The results showed that after autohydrolysis pretreatment the porosity, shrinkage and fiber saturation point (FSP) of the poplar wood chips were increased, while the surface contact angle decreased as the severity factor was increased. The autohydrolyzed chips absorbed more NaOH in impregnation that resulted in a low NaOH concentration in the bulk impregnation liquor (i.e., the impregnation liquor outside wood chips), while the concentration in the entrapped liquor (i.e., the impregnation liquor inside wood chips) was increased. Autohydrolysis substantially improved the effectiveness of alkali impregnation. Copyright © 2016 Elsevier Ltd. All rights reserved.

Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dhillon, Braham; Feau, Nicolas; Aerts, Andrea L.

Some of the most damaging tree diseases are caused by pathogens that induce cankers, a stem deformation often lethal. To investigate the cause of this adaptation, we sequenced the genomes of poplar pathogens that do and do not cause cankers. We found a unique cluster of genes that produce secondary metabolites and are co-activated when the canker pathogen is grown on poplar wood and leaves. The gene genealogy is discordant with the species phylogeny, showing a signature of horizontal transfer from fungi associated with wood decay. Furthermore, genes encoding hemicellulose-degrading enzymes are up-regulated on poplar wood chips, with some havingmore » been acquired horizontally. In conclusion, we propose that adaptation to colonize poplar woody stems is the result of acquisition of these genes.« less

Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen

DOE PAGES

Dhillon, Braham; Feau, Nicolas; Aerts, Andrea L.; ...

2015-03-02

Some of the most damaging tree diseases are caused by pathogens that induce cankers, a stem deformation often lethal. To investigate the cause of this adaptation, we sequenced the genomes of poplar pathogens that do and do not cause cankers. We found a unique cluster of genes that produce secondary metabolites and are co-activated when the canker pathogen is grown on poplar wood and leaves. The gene genealogy is discordant with the species phylogeny, showing a signature of horizontal transfer from fungi associated with wood decay. Furthermore, genes encoding hemicellulose-degrading enzymes are up-regulated on poplar wood chips, with some havingmore » been acquired horizontally. In conclusion, we propose that adaptation to colonize poplar woody stems is the result of acquisition of these genes.« less

Utilization of lignocellulosic polysaccharides

NASA Astrophysics Data System (ADS)

Fenske, John James

Lignocellulosic biomass represents a vast supply of fermentable carbohydrates and functional aromatic compounds. Conversion of lignocellulosics to ethanol and other useful products would be of widespread economical and environmental benefit. Better understanding of the behavior of different lignocellulosic feedstocks in fermentation protocols as well as catalytic activities involved in lignocellulosic depolymerization will further enhance the commercial viability of biomass-to-ethanol conversion processes. The relative toxicity of the combined non-xylose components in prehydrolysates derived from three different lignocellulosic biomass feedstocks (poplar, corn stover and switchgrass, or Panicum virgatum L.) was determined using a Pichia stipits fermentation assay. The relative toxicity of the prehydrolysates, in decreasing order, was poplar-derived prehydrolysates > switchgrass-derived prehydrolysates > corn stover-derived prehydrolysates. Ethanol yields averaged 74%, 83% and 88% of control values for poplar, switchgrass and corn stover prehydrolysates, respectively. Volumetric ethanol productivities (g ethanol lsp{-1} hsp{-1}) averaged 32%, 70% and 102% of control values for poplar, switchgrass and corn stover prehydrolysates, respectively. Ethanol productivities correlated closely with acetate concentrations in the prehydrolysates; however, regression lines correlating acetate concentrations and ethanol productivities were found to be feedstock-dependent. Differences in the relative toxicity of xylose-rich prehydrolysates derived from woody and herbaceous feedstocks are likely due to the relative abundance of a variety of inhibitory compounds, e.g. acetate and aromatic compounds. Fourteen aromatic monomers present in prehydrolysates prepared from corn stover, switchgrass, and poplar were tentatively identified by comparison with published mass spectra. The concentrations of the aromatic monomers totaled 112, 141 and 247 mg(l)sp{-1} for corn stover, switchgrass and poplar prehydrolysates, respectively. The woody and herbaceous feedstocks differed in both amount and type of aromatic monomers. The cellulases of Trichoderma reesei are the most widely studied for use in the depolymerization of lignocellulosics. The Trichoderma cellobiohydrolases CBH1 and CBH2 are traditionally categorized as exo-acting cellulases. A simple individual-based model was created to explore the potential effects of native endo activity on substrate-velocity profiles. The model results indicate that an enzyme with a small amount of endo activity will show an apparent substrate inhibition as substrate levels are increased. Actual hydrolysis studies using affinity chromatography-purified CBH2 preparations from three laboratories indicate that CBH2 has native endo activity, while CBH1 does not.

Effective alkaline metal-catalyzed oxidative delignification of hybrid poplar

DOE PAGES

Bhalla, Aditya; Bansal, Namita; Stoklosa, Ryan J.; ...

2016-02-09

Background: Strategies to improve copper-catalyzed alkaline hydrogen peroxide (Cu-AHP) pretreatment of hybrid poplar were investigated. These improvements included a combination of increasing hydrolysis yields, while simultaneously decreasing process inputs through (i) more efficient utilization of H 2O 2 and (ii) the addition of an alkaline extraction step prior to the metal-catalyzed AHP pretreatment. We hypothesized that utilizing this improved process could substantially lower the chemical inputs needed during pretreatment. Results: Hybrid poplar was pretreated utilizing a modified process in which an alkaline extraction step was incorporated prior to the Cu-AHP treatment step and H 2O 2 was added batch-wise overmore » the course of 10 h. Our results revealed that the alkaline pre-extraction step improved both lignin and xylan solubilization, which ultimately led to improved glucose (86 %) and xylose (95 %) yields following enzymatic hydrolysis. An increase in the lignin solubilization was also observed with fed-batch H 2O 2 addition relative to batch-only addition, which again resulted in increased glucose and xylose yields (77 and 93 % versus 63 and 74 %, respectively). Importantly, combining these strategies led to significantly improved sugar yields (96 % glucose and 94 % xylose) following enzymatic hydrolysis. In addition, we found that we could substantially lower the chemical inputs (enzyme, H 2O 2, and catalyst), while still maintaining high product yields utilizing the improved Cu-AHP process. This pretreatment also provided a relatively pure lignin stream consisting of ≥90 % Klason lignin and only 3 % xylan and 2 % ash following precipitation. Two-dimensional heteronuclear single-quantum coherence (2D HSQC) NMR and size-exclusion chromatography demonstrated that the solubilized lignin was high molecular weight (Mw ≈ 22,000 Da) and only slightly oxidized relative to lignin from untreated poplar. In conclusion: This study demonstrated that the fed-batch, two-stage Cu-AHP pretreatment process was effective in pretreating hybrid poplar for its conversion into fermentable sugars. Results showed sugar yields near the theoretical maximum were achieved from enzymatically hydrolyzed hybrid poplar by incorporating an alkaline extraction step prior to pretreatment and by efficiently utilizing H 2O 2 during the Cu-AHP process. Significantly, this study reports high sugar yields from woody biomass treated with an AHP pretreatment under mild reaction conditions.« less

CENL1 Expression in the Rib Meristem Affects Stem Elongation and the Transition to Dormancy in Populus[W][OA

PubMed Central

Ruonala, Raili; Rinne, Päivi L.H.; Kangasjärvi, Jaakko; van der Schoot, Christiaan

2008-01-01

We investigated the short day (SD)–induced transition to dormancy in wild-type hybrid poplar (Populus tremula × P. tremuloides) and its absence in transgenic poplar overexpressing heterologous PHYTOCHROME A (PHYA). CENTRORADIALIS-LIKE1 (CENL1), a poplar ortholog of Arabidopsis thaliana TERMINAL FLOWER1 (TFL1), was markedly downregulated in the wild-type apex coincident with SD-induced growth cessation. By contrast, poplar overexpressing a heterologous Avena sativa PHYA construct (P35S:AsPHYA), with PHYA accumulating in the rib meristem (RM) and adjacent tissues but not in the shoot apical meristem (SAM), upregulated CENL1 in the RM area coincident with an acceleration of stem elongation. In SD-exposed heterografts, both P35S:AsPHYA and wild-type scions ceased growth and formed buds, whereas only the wild type assumed dormancy and P35S:AsPHYA showed repetitive flushing. This shows that the transition is not dictated by leaf-produced signals but dependent on RM and SAM properties. In view of this, callose-enforced cell isolation in the SAM, associated with suspension of indeterminate growth during dormancy, may require downregulation of CENL1 in the RM. Accordingly, upregulation of CENL1/TFL1 might promote stem elongation in poplar as well as in Arabidopsis during bolting. Together, the results suggest that the RM is particularly sensitive to photoperiodic signals and that CENL1 in the RM influences transition to dormancy in hybrid poplar. PMID:18192437

[Time lag effect between poplar' s sap flow velocity and microclimate factors in agroforestry system in West Liaoning Province].

PubMed

Di, Sun; Guan, De-xin; Yuan, Feng-hui; Wang, An-zhi; Wu, Jia-bing

2010-11-01

By using Granier's thermal dissipation probe, the sap flow velocity of the poplars in agroforestry system in west Liaoning was continuously measured, and the microclimate factors were measured synchronously. Dislocation contrast method was applied to analyze the sap flow velocity and corresponding air temperature, air humidity, net radiation, and vapor pressure deficit to discuss the time lag effect between poplar' s sap flow velocity and microclimate factors on sunny days. It was found that the poplar's sap flow velocity advanced of air temperature, air humidity, and vapor pressure deficit, and lagged behind net radiation. The sap flow velocity in June, July, August, and September was advanced of 70, 30, 50, and 90 min to air temperature, of 80, 30, 40, and 90 min to air humidity, and of 90, 50, 70, and 120 min to vapor pressure deficit, but lagged behind 10, 10, 40, and 40 min to net radiation, respectively. The time lag time of net radiation was shorter than that of air temperature, air humidity, and vapor pressure. The regression analysis showed that in the cases the time lag effect was contained and not, the determination coefficients between comprehensive microclimate factor and poplar's sap flow velocity were 0.903 and 0.855, respectively, indicating that when the time lag effect was contained, the determination coefficient was ascended by 2.04%, and thus, the simulation accuracy of poplar's sap flow velocity was improved.

Anaerobic ethylene glycol degradation by microorganisms in poplar and willow rhizospheres.

PubMed

Carnegie, D; Ramsay, J A

2009-07-01

Although aerobic degradation of ethylene glycol is well documented, only anaerobic biodegradation via methanogenesis or fermentation has been clearly shown. Enhanced ethylene glycol degradation has been demonstrated by microorganisms in the rhizosphere of shallow-rooted plants such as alfalfa and grasses where conditions may be aerobic, but has not been demonstrated in the deeper rhizosphere of poplar or willow trees where conditions are more likely to be anaerobic. This study evaluated ethylene glycol degradation under nitrate-, and sulphate-reducing conditions by microorganisms from the rhizosphere of poplar and willow trees planted in the path of a groundwater plume containing up to 1.9 mol l(-1) (120 g l(-1)) ethylene glycol and, the effect of fertilizer addition when nitrate or sulphate was provided as a terminal electron acceptor (TEA). Microorganisms in these rhizosphere soils degraded ethylene glycol using nitrate or sulphate as TEAs at close to the theoretical stoichiometric amounts required for mineralization. Although the added nitrate or sulphate was primarily used as TEA, TEAs naturally present in the soil or CO(2) produced from ethylene glycol degradation were also used, demonstrating multiple TEA usage. Anaerobic degradation produced acetaldehyde, less acetic acid, and more ethanol than under aerobic conditions. Although aerobic degradation rates were faster, close to 100% disappearance was eventually achieved anaerobically. Degradation rates under nitrate-reducing conditions were enhanced upon fertilizer addition to achieve rates similar to aerobic degradation with up to 19.3 mmol (1.20 g) of ethylene glycol degradation l(-1) day(-1) in poplar soils. This is the first study to demonstrate that microorganisms in the rhizosphere of deep rooted trees like willow and poplar can anaerobically degrade ethylene glycol. Since anaerobic biodegradation may significantly contribute to the phytoremediation of ethylene glycol in the deeper subsurface, the need for "pump and treat" or an aerobic treatment would be eliminated, hence reducing the cost of treatment.

Plantation forestry under global warming: hybrid poplars with improved thermotolerance provide new insights on the in vivo function of small heat shock protein chaperones.

PubMed

Merino, Irene; Contreras, Angela; Jing, Zhong-Ping; Gallardo, Fernando; Cánovas, Francisco M; Gómez, Luis

2014-02-01

Climate-driven heat stress is a key factor affecting forest plantation yields. While its effects are expected to worsen during this century, breeding more tolerant genotypes has proven elusive. We report here a substantial and durable increase in the thermotolerance of hybrid poplar (Populus tremula×Populus alba) through overexpression of a major small heat shock protein (sHSP) with convenient features. Experimental evidence was obtained linking protective effects in the transgenic events with the unique chaperone activity of sHSPs. In addition, significant positive correlations were observed between phenotype strength and heterologous sHSP accumulation. The remarkable baseline levels of transgene product (up to 1.8% of total leaf protein) have not been reported in analogous studies with herbaceous species. As judged by protein analyses, such an accumulation is not matched either by endogenous sHSPs in both heat-stressed poplar plants and field-grown adult trees. Quantitative real time-polymerase chain reaction analyses supported these observations and allowed us to identify the poplar members most responsive to heat stress. Interestingly, sHSP overaccumulation was not associated with pleiotropic effects that might decrease yields. The poplar lines developed here also outperformed controls under in vitro and ex vitro culture conditions (callus biomass, shoot production, and ex vitro survival), even in the absence of thermal stress. These results reinforce the feasibility of improving valuable genotypes for plantation forestry, a field where in vitro recalcitrance, long breeding cycles, and other practical factors constrain conventional genetic approaches. They also provide new insights into the biological functions of the least understood family of heat shock protein chaperones.

Modelling the growth of Populus species using Ecosystem Demography (ED) model

NASA Astrophysics Data System (ADS)

Wang, D.; Lebauer, D. S.; Feng, X.; Dietze, M. C.

2010-12-01

Hybrid poplar plantations are an important source being evaluated for biomass production. Effective management of such plantations requires adequate growth and yield models. The Ecosystem Demography model (ED) makes predictions about the large scales of interest in above- and belowground ecosystem structure and the fluxes of carbon and water from a description of the fine-scale physiological processes. In this study, we used a workflow management tool, the Predictive Ecophysiological Carbon flux Analyzer (PECAn), to integrate literature data, field measurement and the ED model to provide predictions of ecosystem functioning. Parameters for the ED ensemble runs were sampled from the posterior distribution of ecophysiological traits of Populus species compiled from the literature using a Bayesian meta-analysis approach. Sensitivity analysis was performed to identify the parameters which contribute the most to the uncertainties of the ED model output. Model emulation techniques were used to update parameter posterior distributions using field-observed data in northern Wisconsin hybrid poplar plantations. Model results were evaluated with 5-year field-observed data in a hybrid poplar plantation at New Franklin, MO. ED was then used to predict the spatial variability of poplar yield in the coterminous United States (United States minus Alaska and Hawaii). Sensitivity analysis showed that root respiration, dark respiration, growth respiration, stomatal slope and specific leaf area contribute the most to the uncertainty, which suggests that our field measurements and data collection should focus on these parameters. The ED model successfully captured the inter-annual and spatial variability of the yield of poplar. Analyses in progress with the ED model focus on evaluating the ecosystem services of short-rotation woody plantations, such as impacts on soil carbon storage, water use, and nutrient retention.

Functional analysis of overexpressed PtDRS1 involved in abiotic stresses enhances growth in transgenic poplar.

PubMed

Mohammadi, Kourosh; Movahedi, Ali; Maleki, Samaneh Sadat; Sun, Weibo; Zhang, Jiaxin; Almasi Zadeh Yaghuti, Amir; Nourmohammadi, Saeed; Zhuge, Qiang

2018-05-01

Drought and salinity are two main abiotic stressors that can disrupt plant growth and survival. Various biotechnological approaches have been used to alleviate the problem of drought stress by improving water stress resistance in forestry and agriculture. The drought sensitive 1 (DRS1) gene acts as a regulator of drought stress, identified in human, yeast and some model plants, such as Arabidopsis thaliana, but there have been no reports of DRS1 transformation in poplar plants to date. In this study, we transformed the DRS1 gene from Populus trichocarpa into Populus deltoides × Populus euramericana 'Nanlin895' using Agrobacterium tumefaciens-mediated transformation. We confirmed that the DRS1 gene was transformed into 'Nanlin895' poplar genomes using reverse transcription polymerase chain reaction (PCR), multiplex PCR, real-time PCR, and sodium dodecyl sulfate-polyacrylamide gel electrophoresis. All transformed and wild-type (WT) plants were then transferred into a greenhouse for complementary experiments. We analyzed the physiological and biochemical responses of transgenic plants under drought and salt stresses in the greenhouse, and the results were compared with control WT plants. Responses to abiotic stress were greater in transgenic plants compared with WT. Based on our results, introduction of the DRS1 gene into poplar 'Nanlin895' plants significantly enhanced the resistance of those plants to water deficit and high salinity, allowing higher growth rates of roots and shoots in those plants. Additionally, the clawed root rate increased in transformed poplars grown in culture media or in soil, and improved survival under drought and salt stress conditions. Copyright © 2018 Elsevier Masson SAS. All rights reserved.

Bridging the gap between feedstock growers and users: the study of a coppice poplar-based biorefinery.

PubMed

Dou, Chang; Gustafson, Rick; Bura, Renata

2018-01-01

In the biofuel industry, land productivity is important to feedstock growers and conversion process product yield is important to the biorefinery. The crop productivity, however, may not positively correlate with bioconversion yield. Therefore, it is important to evaluate sugar yield and biomass productivity. In this study, 2-year-old poplar trees harvested in the first coppice cycle, including one low-productivity hybrid and one high-productivity hybrid, were collected from two poplar tree farms. Through steam pretreatment and enzymatic hydrolysis, the bioconversion yields of low- and high-productivity poplar hybrids were compared for both sites. The low-productivity hybrids had 9-19% higher sugar yields than the high-productivity hybrids, although they have the similar chemical composition. Economic calculations show the impact on the plantation and biorefinery of using the two feedstocks. Growing a high-productivity hybrid means the land owner would use 11-26% less land (which could be used for other crops) or collect $2.53-$3.46 MM/year extra revenue from the surplus feedstock. On the other side, the biorefinery would receive 5-10% additional revenue using the low-productivity hybrid. We propose a business model based on the integration of the plantation and the biorefinery. In this model, different feedstocks are assessed using a metric of product tonnage per unit land per year. Use of this new economic metric bridges the gap between feedstock growers and users to maximize the overall production efficiency.

Patterns of auxin distribution during gravitational induction of reaction wood in poplar and pine.

PubMed

Hellgren, Jenny M; Olofsson, Kjell; Sundberg, Björn

2004-05-01

Gravistimulation of tree stems affects wood development by unilaterally inducing wood with modified properties, called reaction wood. Commonly, it also stimulates cambial growth on the reaction wood side. Numerous experiments involving applications of indole-3-acetic acid (IAA) or IAA-transport inhibitors have suggested that reaction wood is induced by a redistribution of IAA around the stem. However, in planta proof for this model is lacking. Therefore, we have mapped endogenous IAA distribution across the cambial region tissues in both aspen (Populus tremula, denoted poplar) and Scots pine (Pinus sylvestris) trees forming reaction wood, using tangential cryosectioning combined with sensitive gas chromatography-mass spectrometry analysis. Moreover, we have documented the kinetics of IAA during reaction wood induction in these species. Our analysis of endogenous IAA demonstrates that reaction wood is formed without any obvious alterations in IAA balance. This is in contrast to gravitropic responses in roots and shoots where a redistribution of IAA has been documented. It is also of interest that cambial growth on the tension wood side was stimulated without an increase in IAA. Taken together, our results suggest a role for signals other than IAA in the reaction wood response, or that the gravitational stimulus interacts with the IAA signal transduction pathway.

Delineation of brine contamination in and near the East Poplar oil field, Fort Peck Indian Reservation, northeastern Montana, 2004-09

USGS Publications Warehouse

Thamke, Joanna N.; Smith, Bruce D.

2014-01-01

The extent of brine contamination in the shallow aquifers in and near the East Poplar oil field is as much as 17.9 square miles and appears to be present throughout the entire saturated zone in contaminated areas. The brine contamination affects 15–37 billion gallons of groundwater. Brine contamination in the shallow aquifers east of the Poplar River generally moves to the southwest toward the river and then southward in the Poplar River valley. The likely source of brine contamination in the shallow aquifers is brine that is produced with crude oil in the East Poplar oil field study area. Brine contamination has not only affected the water quality from privately owned wells in and near the East Poplar oil field, but also the city of Poplar’s public water-supply wells. Three water-quality types characterize water in the shallow aquifers; a fourth water-quality type in the study area characterizes the brine. Type 1 is uncontaminated water that is suitable for most domestic purposes and typically contains sodium bicarbonate and sodium/magnesium sulfate as the dominant ions. Type 2 is moderately contaminated water that is suitable for some domestic purposes, but not used for drinking water, and typically contains sodium and chloride as the dominant ions. Type 3 is considerably contaminated water that is unsuitable for any domestic purpose and always contains sodium and chloride as the dominant ions. Type 3 quality of water in the shallow aquifers is similar to Type 4, which is the brine that is produced with crude oil. Electromagnetic apparent conductivity data were collected in the 106 square-mile area and used to determine extent of brine contamination. These data were collected and interpreted in conjunction with water-quality data collected through 2009 to delineate brine plumes in the shallow aquifers. Monitoring wells subsequently were drilled in some areas without existing water wells to confirm most of the delineated brine plumes; however, several possible plumes do not contain either existing water wells or monitoring wells. Analysis of groundwater samples from wells confirms the presence of 12.1 square miles of contamination, as much as 1.7 square miles of which is considerably contaminated (Type 3). Electromagnetic apparent conductivity data in areas with no wells delineate an additional 5.8 square miles of possible contamination, 2.1 square miles of which might be considerably contaminated (Type 3). Storage-tank facilities, oil wells, brine-injection wells, pipelines, and pits are likely sources of brine in the study area. It is not possible to identify discrete oil-related features as likely sources of brine plumes because several features commonly are co-located. During the latter half of the twentieth century, many brine plumes migrated beyond the immediate source area and likely mix together in modern and ancestral Poplar River valley subareas.

Wood reinforcement of poplar by rice NAC transcription factor

PubMed Central

Sakamoto, Shingo; Takata, Naoki; Oshima, Yoshimi; Yoshida, Kouki; Taniguchi, Toru; Mitsuda, Nobutaka

2016-01-01

Lignocellulose, composed of cellulose, hemicellulose, and lignin, in the secondary cell wall constitutes wood and is the most abundant form of biomass on Earth. Enhancement of wood accumulation may be an effective strategy to increase biomass as well as wood strength, but currently only limited research has been undertaken. Here, we demonstrated that OsSWN1, the orthologue of the rice NAC Secondary-wall Thickening factor (NST) transcription factor, effectively enhanced secondary cell wall formation in the Arabidopsis inflorescence stem and poplar (Populus tremula×Populus tremuloides) stem when expressed by the Arabidopsis NST3 promoter. Interestingly, in transgenic Arabidopsis and poplar, ectopic secondary cell wall deposition in the pith area was observed in addition to densification of the secondary cell wall in fiber cells. The cell wall content or density of the stem increased on average by up to 38% and 39% in Arabidopsis and poplar, respectively, without causing growth inhibition. As a result, physical strength of the stem increased by up to 57% in poplar. Collectively, these data suggest that the reinforcement of wood by NST3pro:OsSWN1 is a promising strategy to enhance wood-biomass production in dicotyledonous plant species. PMID:26812961

Cross-laminated timber made of Hungarian raw materials

NASA Astrophysics Data System (ADS)

Marko, G.; Bejo, L.; Takats, P.

2016-04-01

Cross-laminated timber (CLT), generally made out of softwood, enjoys increasing popularity throughout Europe. This material offers a versatile, eco-friendly technology to create strong, lightweight and energy-efficient buildings. Unfortunately, the sites and climatic conditions in Hungary are not suitable for growing high-quality coniferous trees. Transporting raw materials from other countries (sometimes thousands of kilometres away) negates the environmental advantages of wood-based construction. Local options are definitely preferable from an ecological aspect. Poplar wood (populus spp.) is of great economic importance in Hungary. There are several relatively high density, high strength varieties growing in large quantities in Hungary, that may be used as alternatives to softwood, with comparable properties. There is an increasing interest in using poplar as a construction material, especially in regions were there is a shortage of traditional construction timber. This paper presents the results of a preliminary investigation to create CLT using poplar lumber. Laboratory-scale CLT specimens were created in a hot press, and tested for their loadbearing capacity. The MOR values of poplar CLT are comparable to, albeit somewhat lowerthan those of softwood CLT. Further investigations are required to establish the economic viability and technological conditions for the commercial production of poplar CLT.

Yellow-Poplar Rooting Habits

Treesearch

John K. Francis

1979-01-01

Although the configuration of pole-sized yellow-poplar root systems in Tennessee is quite variable, a branched taproot with several widely spreading laterals is typical. Rooting depth is particularly limited by clayey texture, wetness, and firmness of subsoils.

Methods of establishing plantations of hybrid-poplar cuttings

Treesearch

Frank E. Cunningham

1954-01-01

Fast-growing hybrid poplars are now being tested in plantations scattered from Maine to West Virginia to find out how the different hybrids respond to a wide range of environmental conditions throughout the Northeast.

Global Profiling of Rice and Poplar Transcriptomes Highlights Key Conserved Circadian-Controlled Pathways and cis-Regulatory Modules

PubMed Central

Filichkin, Sergei A.; Breton, Ghislain; Priest, Henry D.; Dharmawardhana, Palitha; Jaiswal, Pankaj; Fox, Samuel E.; Michael, Todd P.; Chory, Joanne; Kay, Steve A.; Mockler, Todd C.

2011-01-01

Background Circadian clocks provide an adaptive advantage through anticipation of daily and seasonal environmental changes. In plants, the central clock oscillator is regulated by several interlocking feedback loops. It was shown that a substantial proportion of the Arabidopsis genome cycles with phases of peak expression covering the entire day. Synchronized transcriptome cycling is driven through an extensive network of diurnal and clock-regulated transcription factors and their target cis-regulatory elements. Study of the cycling transcriptome in other plant species could thus help elucidate the similarities and differences and identify hubs of regulation common to monocot and dicot plants. Methodology/Principal Findings Using a combination of oligonucleotide microarrays and data mining pipelines, we examined daily rhythms in gene expression in one monocotyledonous and one dicotyledonous plant, rice and poplar, respectively. Cycling transcriptomes were interrogated under different diurnal (driven) and circadian (free running) light and temperature conditions. Collectively, photocycles and thermocycles regulated about 60% of the expressed nuclear genes in rice and poplar. Depending on the condition tested, up to one third of oscillating Arabidopsis-poplar-rice orthologs were phased within three hours of each other suggesting a high degree of conservation in terms of rhythmic gene expression. We identified clusters of rhythmically co-expressed genes and searched their promoter sequences to identify phase-specific cis-elements, including elements that were conserved in the promoters of Arabidopsis, poplar, and rice. Conclusions/Significance Our results show that the cycling patterns of many circadian clock genes are highly conserved across poplar, rice, and Arabidopsis. The expression of many orthologous genes in key metabolic and regulatory pathways is diurnal and/or circadian regulated and phased to similar times of day. Our results confirm previous findings in Arabidopsis of three major classes of cis-regulatory modules within the plant circadian network: the morning (ME, GBOX), evening (EE, GATA), and midnight (PBX/TBX/SBX) modules. Identification of identical overrepresented motifs in the promoters of cycling genes from different species suggests that the core diurnal/circadian cis-regulatory network is deeply conserved between mono- and dicotyledonous species. PMID:21694767

Remedial investigation/feasibility study for the Clinch River/Poplar Creek operable unit. Volume 1. Main text

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1995-09-01

This is the combined Remedial Investigation/Feasibility Study Report for the Clinch River/Poplar Crack (CR/PC) Operable Unit (OU). The CR/PC OU is located in Anderson and Roane Counties, Tennessee and consists of the Clinch River and several of its embayments in Melton Hill and Watts Bar Reservoirs. These waters have received hazardous substances released over a period of 50 years from the US Department of Energy`s Oak Ridge Reservation (ORR), a National Priority List site established under the Comprehensive Environmental Response, Compensation, and Liability Act. A remedial investigation has been conducted to determine the current nature and extent of any contaminationmore » and to assess the resulting risk to human health and the environment. The feasibility study evaluates remedial action alternatives to identify any that are feasible for implementation and that would effectively reduce risk. Historical studies had indicated that current problems would likely include {sup 137}Cs in sediment of the Clinch River, mercury in sediment and fish of Poplar Creek and PCBs and pesticides in fish from throughout the OU. Peak releases of mercury and {sup 137}Cs occurred over 35 years ago, and current releases are low. Past releases of PCBs from the ORR are poorly quantified, and current releases are difficult to quantify because levels are so low. The site characterization focused on contaminants in surface water, sediment, and biota. Contaminants in surface water were all found to be below Ambient Water Quality Criteria. Other findings included the following: elevated metals including cesium 137 and mercury in McCoy Branch sediments; PCBs and chlordane elevated in several fish species, presenting the only major human health risk, significant ecological risks in Poplar Creek but not in the Clinch River.« less

Energy partitioning and surface resistance of a poplar plantation in northern China

NASA Astrophysics Data System (ADS)

Kang, M.; Zhang, Z.; Noormets, A.; Fang, X.; Zha, T.; Zhou, J.; Sun, G.; McNulty, S. G.; Chen, J.

2015-07-01

Poplar (Populus sp.) plantations have been, on the one hand, broadly used in northern China for urban greening, combating desertification, as well as for paper and wood production. On the other hand, such plantations have been questioned occasionally for their possible negative impacts on water availability due to the higher water-use nature of poplar trees compared with other tree species in water-limited dryland regions. To further understand the acclimation of poplar species to semiarid environments and to evaluate the potential impacts of these plantations on the broader context of the region's water supply, we examine the variability of bulk resistance parameters and energy partitioning in a poplar (Populus euramericana cv. "74/76") plantation located in northern China over a 4-year period, encompassing both dry and wet conditions. The partitioning of available energy to latent heat flux (LE) decreased from 0.62 to 0.53 under mediated meteorological drought by irrigation applications. A concomitant increase in sensible heat flux (H) resulted in the increase of a Bowen ratio from 0.83 to 1.57. Partial correlation analysis indicated that surface resistance (Rs) normalized by leaf area index (LAI; Rs:LAI) increased by 50 % under drought conditions and was the dominant factor controlling the Bowen ratio. Furthermore, Rs was the main factor controlling LE during the growing season, even in wet years, as indicated by the decoupling coefficient (Ω = 0.45 and 0.39 in wet and dry years, respectively). Rs was also a major regulator of the LE / LEeq ratio, which decreased from 0.81 in wet years to 0.68 in dry years. All physiological and bioclimatological metrics indicated that the water demands of the poplar plantation were greater than the amount available through precipitation, highlighting the poor match of a water-intensive species like poplar for this water-limited region.

Developing xylem-preferential expression of PdGA20ox1, a gibberellin 20-oxidase 1 from Pinus densiflora, improves woody biomass production in a hybrid poplar.

PubMed

Jeon, Hyung-Woo; Cho, Jin-Seong; Park, Eung-Jun; Han, Kyung-Hwan; Choi, Young-Im; Ko, Jae-Heung

2016-04-01

Woody biomass has gained popularity as an environmentally friendly, renewable and sustainable resource for liquid fuel production. Here, we demonstrate biotechnological improvement of the quantity and quality of woody biomass by employing developing xylem (DX)-preferential production of gibberellin (GA), a phytohormone that positively regulates stem growth. First, for the proof of concept experiment, we produced transgenic Arabidopsis plants expressing GA20-oxidase, a key enzyme in the production of bioactive GAs, from Pinus densiflora (PdGA20ox1) under the control of either a constitutive 35S promoter, designated 35S::PdGA20ox1, or a DX-specific promoter (originated from poplar), designated DX15::PdGA20ox1. As we hypothesized, both transgenic Arabidopsis plants (35S::PdGA20ox1 and DX15::PdGA20ox1) exhibited an accelerated stem growth that resulted in a large increase of biomass, up to 300% compared to wild-type control plants, together with increased secondary wall thickening and elongation of fibre cells. Next, we applied our concept to the production of transgenic poplar trees. Both transgenic poplar trees (35S::PdGA20ox1 and DX15::PdGA20ox1) showed dramatic increases in biomass, up to 300%, with accelerated stem growth and xylem differentiation. Cell wall monosaccharide composition analysis revealed that in both Arabidopsis and poplar, glucose and xylose contents were significantly increased. However, undesirable phenotypes of 35S::PdGA20ox1 poplar, including poor root growth and leaf development, were found. Interestingly, DX15::PdGA20ox1 poplar resulted in a reduction of undesirable phenotypes. Our results indicate that the controlled production of GAs through a tissue-specific promoter can be utilized as an efficient biotechnological tool for producing enhanced plant biomass, minimizing unwanted effects. © 2015 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Establishing intensively cultured hybrid poplar plantations for fuel and fiber.

Treesearch

Edward Hansen; Lincoln Moore; Daniel Netzer; Michael Ostry; Howard Phipps; Jaroslav Zavitkovski

1983-01-01

This paper describes a step-by-step procedure for establishing commercial size intensively cultured plantations of hybrid poplar and summarizes the state-of-knowledge as developed during 10 years of field research at Rhinelander, Wisconsin.

The use of poplar during a two-year induced phytoextraction of metals from contaminated agricultural soils.

PubMed

Komárek, Michael; Tlustos, Pavel; Száková, Jirina; Chrastný, Vladislav

2008-01-01

The efficiency of poplar (Populus nigra L.xPopulus maximowiczii Henry.) was assessed during a two-year chemically enhanced phytoextraction of metals from contaminated soils. The tested metal mobilizing agents were EDTA (ethylenediaminetetraacetic acid) and NH4Cl. EDTA was more efficient than chlorides in solubilizing metals (especially Pb) from the soil matrix. The application of chlorides only increased the solubility of Cd and Zn. However, the increased uptake of metals after the application of higher concentrations of mobilizing agents was associated with low biomass yields of the poplar plants and the extraction efficiencies after the two vegetation periods were thus comparable to the untreated plants. Additionally, the application of mobilizing agents led to phytotoxicity effects and increased mobility of metals. Higher phytoextraction efficiencies were observed for Cd and Zn compared to Pb and Cu. Poplars are therefore not suitable for chemically enhanced phytoextraction of metals from severely contaminated agricultural soils.

Transgenic Hybrid Poplar for Sustainable and Scalable Production of the Commodity/Specialty Chemical, 2-Phenylethanol

PubMed Central

Costa, Michael A.; Marques, Joaquim V.; Dalisay, Doralyn S.; Herman, Barrington; Bedgar, Diana L.; Davin, Laurence B.; Lewis, Norman G.

2013-01-01

Fast growing hybrid poplar offers the means for sustainable production of specialty and commodity chemicals, in addition to rapid biomass production for lignocellulosic deconstruction. Herein we describe transformation of fast-growing transgenic hybrid poplar lines to produce 2-phenylethanol, this being an important fragrance, flavor, aroma, and commodity chemical. It is also readily converted into styrene or ethyl benzene, the latter being an important commodity aviation fuel component. Introducing this biochemical pathway into hybrid poplars marks the beginnings of developing a platform for a sustainable chemical delivery system to afford this and other valuable specialty/commodity chemicals at the scale and cost needed. These modified plant lines mainly sequester 2-phenylethanol via carbohydrate and other covalently linked derivatives, thereby providing an additional advantage of effective storage until needed. The future potential of this technology is discussed. MALDI metabolite tissue imaging also established localization of these metabolites in the leaf vasculature. PMID:24386157

Genomic insights into salt adaptation in a desert poplar

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ma, Tao; Wang, Junyi; Zhou, Gongke

2013-01-01

Despite the high economic and ecological importance of forests, our knowledge of the genomic evolution of trees under salt stress remains very limited. Here we report the genome sequence of the desert poplar, Populus euphratica, which exhibits high tolerance to sa lt stress. Its genome is very similar and collinear to that of the closely related mesophytic congener, P trichocarpa. However, we find that several gene families likely to be involved in tolerance to salt stress contain significantly more gene copies within the P euphratica lineage. Furthermore, genes showing evidence of positive selection are significantly enriched in functional categories relatedmore » to salt stress. Some of these genes, and others within the same categories, are significantly upregulated under salt stress relative to their expression in another salt-sensitive poplar. Our results provide an important background for understanding tree adaptation to salt stress and facilitating the genetic improvement of cultivated poplars for saline soils.« less

Remedial investigation/feasibility study of the Clinch River/Poplar Creek operable unit. Volume 1: Main text

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

This report presents the findings of an investigation into contamination of the Clinch River and Poplar Creek near the US Department of Energy`s (DOE`s) Oak Ridge Reservation (ORR) in eastern Tennessee. For more than 50 years, various hazardous and radioactive substances have been released to the environment as a result of operations and waste management activities at the ORR. In 1989, the ORR was placed on the National Priorities List (NPL), established and maintained under the federal Comprehensive environmental Response, Compensation, and Liability Act of 1980 (CERCLA). Under CERCLA, NPL sites must be investigated to determine the nature and extentmore » of contamination at the site, assess the risk to human health and the environment posed by the site, and, if necessary, identify feasible remedial alternatives that could be used to clean the site and reduce risk. To facilitate the overall environmental restoration effort at the ORR, CERCLA activities are being implemented individually as distinct operable units (OUs). This document is the combined Remedial Investigation and Feasibility Study Report for the Clinch River/Poplar Creek OU.« less

Static renewal tests using Pimephales promelas (fathead minnows) and Ceriodaphnia dubia (daphnids). Clinch River-Environmental Restoration Program (CR-ERP) study, ambient water toxicity

DOE Office of Scientific and Technical Information (OSTI.GOV)

Simbeck, D.J.

1994-12-31

Clinch River-Environmental Restoration Program (CR-ERP) personnel and Tennessee Valley Authority (TVA) personnel conducted a study during the week of January 25--February 1, 1994. The organisms specified for testing were larval fathead minnows, Pimephales promelas, and the daphnid, Ceriodaphnia dubia. Surface water samples were collected from Clinch River Mile 9.0, Poplar Creek Mile 1.0, and Poplar Creek Mile 2.9 on January 24, 26, and 28. Samples were partitioned and provided to the CR-ERP and TVA toxicology laboratories for testing. Exposure of test organisms to these samples resulted in no toxicity (survival or growth) to fathead minnows; however, toxicity to daphnids wasmore » demonstrated in undiluted samples from Poplar Creek Mile 1.0 in testing conducted by TVA based on hypothesis testing of data. Point estimation (IC{sub 25}) analysis of the data, however, showed no toxicity in PCM 1.0 samples. Attachments to this report include: Chain of custody forms -- originals; Toxicity test bench sheets and statistical analyses; Meter calibrations; and Reference toxicant test information.« less

Strontium isotope detection of brine contamination in the East Poplar oil field, Montana

USGS Publications Warehouse

Peterman, Zell E.; Thamke, Joanna N.; Futa, Kiyoto; Oliver, Thomas A.

2010-01-01

Brine contamination of groundwater in the East Poplar oil field was first documented in the mid-1980s by the U.S. Geological Survey by using hydrochemistry, with an emphasis on chloride (Cl) and total dissolved solids concentrations. Supply wells for the City of Poplar are located downgradient from the oil field, are completed in the same shallow aquifers that are documented as contaminated, and therefore are potentially at risk of being contaminated. In cooperation with the Office of Environmental Protection of the Fort Peck Tribes, groundwater samples were collected in 2009 and 2010 from supply wells, monitor wells, and the Poplar River for analyses of major and trace elements, including strontium (Sr) concentrations and isotopic compositions. The ratio of strontium-87 to strontium-86 (87Sr/86Sr) is used extensively as a natural tracer in groundwater to detect mixing among waters from different sources and to study the effects of water/rock interaction. On a plot of the reciprocal strontium concentration against the 87Sr/86Sr ratio, mixtures of two end members will produce a linear array. Using this plotting method, data for samples from most of the wells, including the City of Poplar wells, define an array with reciprocal strontium values ranging from 0.08 to 4.15 and 87Sr/86Sr ratios ranging from 0.70811 to 0.70828. This array is composed of a brine end member with an average 87Sr/86Sr of 0.70822, strontium concentrations in excess of 12.5 milligrams per liter (mg/L), and chloride concentrations exceeding 8,000 mg/L mixing with uncontaminated water similar to that in USGS06-08 with 18.0 mg/L chloride, 0.24 mg/L strontium, and a 87Sr/86Sr ratio of 0.70811. The position of samples from the City of Poplar public-water supply wells within this array indicates that brine contamination has reached all three wells. Outliers from this array are EPU-4G (groundwater from the Cretaceous Judith River Formation), brine samples from disposal wells (Huber 5-D and EPU 1-D), USGS92-11 (a well with water that was considerably contaminated in 1992 and becoming less saline with time), and PNR-27 (only slightly below the defined trend with an 87Sr/86Sr ratio of 0.70793). Water samples from the City of Poplar wells are also enriched in anions and cations that are abundant in oil-field brine.

Mapping of taiga forest units using AIRSAR data and/or optical data, and retrieval of forest parameters

NASA Technical Reports Server (NTRS)

Rignot, Eric; Williams, Cynthia; Way, Jobea; Viereck, Leslie

1993-01-01

A maximum a posteriori Bayesian classifier for multifrequency polarimetric SAR data is used to perform a supervised classification of forest types in the floodplains of Alaska. The image classes include white spruce, balsam poplar, black spruce, alder, non-forests, and open water. The authors investigate the effect on classification accuracy of changing environmental conditions, and of frequency and polarization of the signal. The highest classification accuracy (86 percent correctly classified forest pixels, and 91 percent overall) is obtained combining L- and C-band frequencies fully polarimetric on a date where the forest is just recovering from flooding. The forest map compares favorably with a vegetation map assembled from digitized aerial photos which took five years for completion, and address the state of the forest in 1978, ignoring subsequent fires, changes in the course of the river, clear-cutting of trees, and tree growth. HV-polarization is the most useful polarization at L- and C-band for classification. C-band VV (ERS-1 mode) and L-band HH (J-ERS-1 mode) alone or combined yield unsatisfactory classification accuracies. Additional data acquired in the winter season during thawed and frozen days yield classification accuracies respectively 20 percent and 30 percent lower due to a greater confusion between conifers and deciduous trees. Data acquired at the peak of flooding in May 1991 also yield classification accuracies 10 percent lower because of dominant trunk-ground interactions which mask out finer differences in radar backscatter between tree species. Combination of several of these dates does not improve classification accuracy. For comparison, panchromatic optical data acquired by SPOT in the summer season of 1991 are used to classify the same area. The classification accuracy (78 percent for the forest types and 90 percent if open water is included) is lower than that obtained with AIRSAR although conifers and deciduous trees are better separated due to the presence of leaves on the deciduous trees. Optical data do not separate black spruce and white spruce as well as SAR data, cannot separate alder from balsam poplar, and are of course limited by the frequent cloud cover in the polar regions. Yet, combining SPOT and AIRSAR offers better chances to identify vegetation types independent of ground truth information using a combination of NDVI indexes from SPOT, biomass numbers from AIRSAR, and a segmentation map from either one.

Can we use short rotation coppice poplar for sugar based biorefinery feedstock? Bioconversion of 2-year-old poplar grown as short rotation coppice.

PubMed

Dou, Chang; Marcondes, Wilian F; Djaja, Jessica E; Bura, Renata; Gustafson, Rick

2017-01-01

Feedstock cost is a substantial barrier to the commercialization of lignocellulosic biorefineries. Poplar grown using a short rotation coppice (SRC) system has the potential to provide a low-cost feedstock and economically viable sugar yields for fuels and chemicals production. In the coppice management regime, poplars are harvested after 2 years' growth to develop the root system and establish the trees. The biomass from these 2-year-old trees is very heterogeneous, and includes components of leaf, bark, branch, and wood chip. This material is quite different than the samples that have been used in most poplar bioconversion research, which come from mature trees of short rotation forestry (SRF) plantations. If the coppice management regime is to be used, it is important that feedstock growers maximize their revenue from this initial harvest, but the heterogeneous nature of the biomass may be challenging for bioconversion. This work evaluates bioconversion of 2-year-old poplar coppice and compares its performance to whitewood chips from 12-year-old poplar. The 2-year-old whole tree coppice (WTC) is comprised of 37% leaf, 9% bark, 12% branch, and 42% wood chip. As expected, the chemical compositions of each component were markedly different. The leaf has a low sugar content but is high in phenolics, ash, and extractives. By removing the leaves, the sugar content of the biomass increased significantly, while the phenolic, ash, and extractives contents decreased. Leaf removal improved monomeric sugar yield by 147 kg/tonne of biomass following steam pretreatment and enzymatic hydrolysis. Bioconversion of the no-leaf coppice (NLC) achieved a 67% overall sugar recovery, showing no significant difference to mature whitewood from forestry plantation (WWF, 71%). The overall sugar yield of NLC was 135 kg/tonne less than that of WWF, due to the low inherent sugar content in original biomass. An economic analysis shows the minimum ethanol selling price required to cover the operating cost of NLC bioconversion was $1.69/gallon. Leaf removal resulted in significant improvement in overall monomeric sugar production from SRC biomass. Leaf removal is essential to achieve good yields in bioconversion of poplar. Economic analysis suggests the NLC could be a reasonable feedstock provided it can be obtained at a discounted price.

[Phosphorus transfer between mixed poplar and black locust seedlings].

PubMed

He, Wei; Jia, Liming; Hao, Baogang; Wen, Xuejun; Zhai, Mingpu

2003-04-01

In this paper, the 32P radio-tracer technique was applied to study the ways of phosphorus transfer between poplar (Populus euramericana cv. 'I-214') and black locust (Robinia pseudoacacia). A five compartment root box (18 cm x 18 cm x 26 cm) was used for testing the existence of the hyphal links between the roots of two tree species when inoculated with vesicular-arbuscular (VA) mycorrhizal fungus (Glomus mosseae). Populus I-214 (donor) and Robinia pseudoacacia (receiver) were grown in two terminal compartments, separated by a 2 cm root-free soil layer. The root compartments were lined with bags of nylon mesh (38 microns) that allowed the passage of hyphae but not roots. The top soil of a mixed stand of poplar and black locust, autoclaved at 121 degrees C for one hour, was used for growing seedlings for testing. In 5 compartment root box, mycorrhizal root colonization of poplar was 34%, in which VA mycorrhizal fungus was inoculated, whereas 26% mycorrhizal root colonization was observed in black locust, the other terminal compartment, 20 weeks after planting. No root colonization was observed in non-inoculated plant pairs. This indicated that the mycorrhizal root colonization of black locust was caused by hyphal spreading from the poplar. Test of tracer isotope of 32P showed that the radioactivity of the treatment significantly higher than that of the control (P < 0.05), 14 days from the tracer applied, to 27 days after, when VA mycorrhizal fungus was inoculated in poplar root. Furthermore, mycorrhizal interconnections between the roots of poplar and black locust seedlings was observed in situ by binocular in root box. All these experiments showed that the hyphal links was formed between the roots of two species of trees inoculated by VA mycorrhizal fungus. Four treatments were designed according to if there were two nets (mesh 38 microns), 2 cm apart, between the poplar and black locust, and if the soil in root box was pasteurized. Most significant differences of radioactivity among four treatments appeared 44 days after feeding 32P, the radioactivity of the day was applied to estimating the contribution of the various possible transfer ways to the total amount of nutrient transfer. Level of 32P radioactivity was found to be significantly (P < 0.05) higher in leaves of the treatment of "no separated and soil non-pasteurized" (17.1 pulse.g-1.s-1) than in leaves of "net separated and soil non-pasteurized" (5.3 pulse.g-1.s-1), and also significantly higher in leaves of "no net separated and soil pasteurized" (11.5 pulse.g.s-1) than in leaves of "net separated and soil pasteurized" (2.3 pulse.g-1.s-1), and very significantly (P < 0.01) higher in leaves of "no net separated and soil non-pasteurized" than in leaves of "net separated and soil pasteurized", whereas the levels of 32P radioactivity were not significantly different between the other treatments. The results showed that root contact and root exudations were the main ways of phosphorus transfer between the two species and the amount of phosphorus transfer through these two ways accounted for 62% of the total. The activity of the microorganisms including VA mycorrhizal fungi and the interaction between the microorganisms and root contact and root exudations made up 38% of total amount of phosphorus. The effect of mycorrhizal hyphal links in the direct nutrient transfer between poplar and black locust through separate mesh (38 microns) was little.

Overexpression of a cytosolic NADP+-isocitrate dehydrogenase causes alterations in the vascular development of hybrid poplars.

PubMed

Pascual, María Belén; Molina-Rueda, Juan Jesús; Cánovas, Francisco M; Gallardo, Fernando

2018-06-15

Cytosolic NADP+-isocitrate dehydrogenase (ICDH) is one of the major enzymes involved in the production of 2-oxoglutarate for amino acid biosynthesis in plants. In most plants studied, ICDH is encoded by either one gene or a small gene family, and the protein sequence has been highly conserved during evolution, suggesting it plays different and essential roles in metabolism and differentiation. To elucidate the role of ICDH in hybrid poplar (Populus tremula x P. alba), transgenic plants overexpressing the Pinus pinaster gene were generated. Overexpression of ICDH resulted in hybrid poplar (Populus tremula × P. alba) trees with higher expression levels of the endogenous ICDH gene and higher enzyme content than control untransformed plants. Transgenic poplars also showed an increased expression of glutamine synthetase (GS1.3), glutamate decarboxylase (GAD) and other genes associated with vascular differentiation. Furthermore, these plants exhibited increased growth in height, longer internodes and enhanced vascular development in young leaves and the apical region of stem. Modifications in amino acid and organic acid content were observed in young leaves of the transgenic lines, suggesting an increased biosynthesis of amino acids for building new structures and also for transport to other sink organs, as expanding leaves or young stems. Taken together, these results support an important role of ICDH in plant growth and vascular development.

Limitations for phytoextraction management on metal-polluted soils with poplar short rotation coppice-evidence from a 6-year field trial.

PubMed

Michels, E; Annicaerta, B; De Moor, S; Van Nevel, L; De Fraeye, M; Meiresonne, L; Vangronsveld, J; Tack, F M G; Ok, Y S; Meers, Erik

2018-01-02

Poplar clones were studied for their phytoextraction capacity in the second growth cycle (6-year growth) on a site in the Belgian Campine region, which is contaminated with Cd and Zn via historic atmospheric deposition of nearby zinc smelter activities. The field trial revealed regrowth problems for some clones that could not be predicted in the first growth cycle. Four allometric relations were assessed for their capacity to predict biomass yield in the second growth cycle. A power function based on the shoot diameter best estimates the biomass production of poplar with R 2 values between 0.94 and 0.98. The woody biomass yield ranged from 2.1 to 4.8 ton woody Dry Mass (DM) ha -1 y -1 . The primary goal was to reduce soil concentrations of metals caused by phytoextraction. Nevertheless, increased metal concentrations were determined in the topsoil. This increase can partially be explained by the input of metals from deeper soil layers in the top soil through litterfall. The phytoextraction option with poplar short rotation coppice in this setup did not lead to the intended soil remediation in a reasonable time span. Therefore, harvest of the leaf biomass is put forward as a crucial part of the strategy for soil remediation through Cd/Zn phytoextraction.

Effects of root pruning on the physicochemical properties and microbial activities of poplar rhizosphere soil.

PubMed

Jing, Da-Wei; Liu, Fang-Chun; Wang, Ming-You; Ma, Hai-Lin; Du, Zhen-Yu; Ma, Bing-Yao; Dong, Yu-Feng

2017-01-01

This study aimed to determine the effects of root pruning on the physicochemical characteristics and microbial activities of poplar rhizosphere soil. The root systems of 5-year-old poplar (Populus×euramericana cv. 'Neva') trees were manually pruned at 6, 8, or 10 times diameter at breast height (DBH) from the trunk (severe, moderate, and light, respectively) along both inter-row sides. Moderate root pruning significantly increased the concentrations of amino acids, organic acids, and total sugars in the root exudates and decreased the pH of rhizosphere soil. This treatment also increased the contents of available nitrogen, phosphorus, potassium, and total organic carbon as well as high-, medium-, and low-activity organic carbon in rhizosphere soil. Moreover, moderate pruning increased the contents of microbial biomass carbon and nitrogen, and enhanced basal respiration, in addition to decreasing the metabolic quotients in rhizosphere soil by 8.9%, 5.0%, and 11.4% compared with control, light, and severe root pruning treatments, respectively. Moderate pruning increased the growth rates of DBH, tree height, and volume to the highest levels. Furthermore, these indices were not significantly different between the light root pruning and control groups, but varied significantly between severe and moderate root-pruning treatments. Thus, root pruning, depending on the distance from the trunk, significantly influences the physicochemical properties and microbial activities in poplar rhizosphere soil.

An in-depth understanding of biomass recalcitrance using natural poplar variants as the feedstock

DOE PAGES

Meng, Xianzhi; Pu, Yunqiao; Yoo, Chang Geun; ...

2016-12-12

Here, in an effort to better understand the biomass recalcitrance, six natural poplar variants were selected as feedstocks based on previous sugar release analysis. Compositional analysis and physicochemical characterizations of these poplars were performed and the correlations between these physicochemical properties and enzymatic hydrolysis yield were investigated. Gel permeation chromatography (GPC) and 13C solid state NMR were used to determine the degree of polymerization (DP) and crystallinity index (CrI) of cellulose, and the results along with the sugar release study indicated that cellulose DP likely played a more important role in enzymatic hydrolysis. Simons’ stain revealed that the accessible surface area of substrate significantly varied among these variants from 17.3 to 33.2 mg gmore » $$–1\\atop{biomass}$$ as reflected by dye adsorption, and cellulose accessibility was shown as one of the major factors governing substrates digestibility. HSQC and 31P NMR analysis detailed the structural features of poplar lignin variants. Overall, cellulose relevant factors appeared to have a stronger correlation with glucose release, if any, than lignin structural features. Lignin structural features, such as a phenolic hydroxyl group and the ratio of syringyl and guaiacyl (S/G), were found to have a more convincing impact on xylose release. Low lignin content, low cellulose DP, and high cellulose accessibility generally favor enzymatic hydrolysis; however, recalcitrance cannot be simply judged on any single substrate factor.« less

An in-depth understanding of biomass recalcitrance using natural poplar variants as the feedstock

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meng, Xianzhi; Pu, Yunqiao; Yoo, Chang Geun

Here, in an effort to better understand the biomass recalcitrance, six natural poplar variants were selected as feedstocks based on previous sugar release analysis. Compositional analysis and physicochemical characterizations of these poplars were performed and the correlations between these physicochemical properties and enzymatic hydrolysis yield were investigated. Gel permeation chromatography (GPC) and 13C solid state NMR were used to determine the degree of polymerization (DP) and crystallinity index (CrI) of cellulose, and the results along with the sugar release study indicated that cellulose DP likely played a more important role in enzymatic hydrolysis. Simons’ stain revealed that the accessible surface area of substrate significantly varied among these variants from 17.3 to 33.2 mg gmore » $$–1\\atop{biomass}$$ as reflected by dye adsorption, and cellulose accessibility was shown as one of the major factors governing substrates digestibility. HSQC and 31P NMR analysis detailed the structural features of poplar lignin variants. Overall, cellulose relevant factors appeared to have a stronger correlation with glucose release, if any, than lignin structural features. Lignin structural features, such as a phenolic hydroxyl group and the ratio of syringyl and guaiacyl (S/G), were found to have a more convincing impact on xylose release. Low lignin content, low cellulose DP, and high cellulose accessibility generally favor enzymatic hydrolysis; however, recalcitrance cannot be simply judged on any single substrate factor.« less

Effects of root pruning on the physicochemical properties and microbial activities of poplar rhizosphere soil

PubMed Central

Jing, Da-Wei; Liu, Fang-Chun; Wang, Ming-You; Ma, Hai-Lin; Du, Zhen-Yu; Ma, Bing-Yao; Dong, Yu-Feng

2017-01-01

This study aimed to determine the effects of root pruning on the physicochemical characteristics and microbial activities of poplar rhizosphere soil. The root systems of 5-year-old poplar (Populus×euramericana cv. ‘Neva’) trees were manually pruned at 6, 8, or 10 times diameter at breast height (DBH) from the trunk (severe, moderate, and light, respectively) along both inter-row sides. Moderate root pruning significantly increased the concentrations of amino acids, organic acids, and total sugars in the root exudates and decreased the pH of rhizosphere soil. This treatment also increased the contents of available nitrogen, phosphorus, potassium, and total organic carbon as well as high-, medium-, and low-activity organic carbon in rhizosphere soil. Moreover, moderate pruning increased the contents of microbial biomass carbon and nitrogen, and enhanced basal respiration, in addition to decreasing the metabolic quotients in rhizosphere soil by 8.9%, 5.0%, and 11.4% compared with control, light, and severe root pruning treatments, respectively. Moderate pruning increased the growth rates of DBH, tree height, and volume to the highest levels. Furthermore, these indices were not significantly different between the light root pruning and control groups, but varied significantly between severe and moderate root-pruning treatments. Thus, root pruning, depending on the distance from the trunk, significantly influences the physicochemical properties and microbial activities in poplar rhizosphere soil. PMID:29117215

PHOTOPERIOD RESPONSE 1 (PHOR1)-like genes regulate shoot/root growth, starch accumulation, and wood formation in Populus.

PubMed

Zawaski, Christine; Ma, Cathleen; Strauss, Steven H; French, Darla; Meilan, Richard; Busov, Victor B

2012-09-01

This study describes functional characterization of two putative poplar PHOTOPERIOD RESPONSE 1 (PHOR1) orthologues. The expression and sequence analyses indicate that the two poplar genes diverged, at least partially, in function. PtPHOR1_1 is most highly expressed in roots and induced by short days, while PtPHOR1_2 is more uniformly expressed throughout plant tissues and is not responsive to short days. The two PHOR1 genes also had distinct effects on shoot and root growth when their expression was up- and downregulated transgenically. PtPHOR1_1 effects were restricted to roots while PtPHOR1_2 had similar effects on aerial and below-ground development. Nevertheless, both genes seemed to be upregulated in transgenic poplars that are gibberellin-deficient and gibberellin-insensitive, suggesting interplay with gibberellin signalling. PHOR1 suppression led to increased starch accumulation in both roots and stems. The effect of PHOR1 suppression on starch accumulation was coupled with growth-inhibiting effects in both roots and shoots, suggesting that PHOR1 is part of a mechanism that regulates the allocation of carbohydrate to growth or storage in poplar. PHOR1 downregulation led to significant reduction of xylem formation caused by smaller fibres and vessels suggesting that PHOR1 likely plays a role in the growth of xylem cells.

PHOTOPERIOD RESPONSE 1 (PHOR1)-like Genes Regulate Shoot/root Growth, Starch Accumulation, and Wood Formation in Populus

PubMed Central

Busov, Victor B.

2012-01-01

This study describes functional characterization of two putative poplar PHOTOPERIOD RESPONSE 1 (PHOR1) orthologues. The expression and sequence analyses indicate that the two poplar genes diverged, at least partially, in function. PtPHOR1_1 is most highly expressed in roots and induced by short days, while PtPHOR1_2 is more uniformly expressed throughout plant tissues and is not responsive to short days. The two PHOR1 genes also had distinct effects on shoot and root growth when their expression was up- and downregulated transgenically. PtPHOR1_1 effects were restricted to roots while PtPHOR1_2 had similar effects on aerial and below-ground development. Nevertheless, both genes seemed to be upregulated in transgenic poplars that are gibberellin-deficient and gibberellin-insensitive, suggesting interplay with gibberellin signalling. PHOR1 suppression led to increased starch accumulation in both roots and stems. The effect of PHOR1 suppression on starch accumulation was coupled with growth-inhibiting effects in both roots and shoots, suggesting that PHOR1 is part of a mechanism that regulates the allocation of carbohydrate to growth or storage in poplar. PHOR1 downregulation led to significant reduction of xylem formation caused by smaller fibres and vessels suggesting that PHOR1 likely plays a role in the growth of xylem cells. PMID:22915748

Characterisation of the willow phenylalanine ammonia-lyase (PAL) gene family reveals expression differences compared with poplar

PubMed Central

de Jong, Femke; Hanley, Steven J.; Beale, Michael H.; Karp, Angela

2015-01-01

Willow is an important biomass crop for the bioenergy industry, and therefore optimal growth with minimal effects of biotic and abiotic stress is essential. The phenylpropanoid pathway is responsible for the biosynthesis of not only lignin but also of flavonoids, condensed tannins, benzenoids and phenolic glycosides which all have a role in protecting the plant against biotic and abiotic stress. All products of the phenylpropanoid pathway are important for the healthy growth of short rotation cropping species such as willow. However, the phenylpropanoid pathway in willow remains largely uncharacterised. In the current study we identified and characterised five willow phenylalanine ammonia-lyase (PAL) genes, which encode enzymes that catalyse the deamination of l-phenylalanine to form trans-cinnamic acid, the entry point into the phenylpropanoid pathway. Willow PAL1, PAL2, PAL3 and PAL4 genes were orthologous to the poplar genes. However no orthologue of PAL5 appears to be present in willow. Moreover, two tandemly repeated PAL2 orthologues were identified in a single contig. Willow PALs show similar sub-cellular localisation to the poplar genes. However, the enzyme kinetics and gene expression of the willow PAL genes differed slightly, with willow PAL2 being more widely expressed than its poplar orthologues implying a wider role for PALs in the production of flavonoids, condensed tannins, benzenoids, and phenolic glycosides, in willow. PMID:26070140

Towards a map of the Populus biomass protein-protein interaction network

DOE Office of Scientific and Technical Information (OSTI.GOV)

Beers, Eric; Brunner, Amy; Helm, Richard

Biofuels can be produced from a variety of plant feedstocks. The value of a particular feedstock for biofuels production depends in part on the degree of difficulty associated with the extraction of fermentable sugars from the plant biomass. The wood of trees is potentially a rich source fermentable sugars. However, the sugars in wood exist in a tightly cross-linked matrix of cellulose, hemicellulose, and lignin, making them largely recalcitrant to release and fermentation for biofuels production. Before breeders and genetic engineers can effectively develop plants with reduced recalcitrance to fermentation, it is necessary to gain a better understanding of themore » fundamental biology of the mechanisms responsible for wood formation. Regulatory, structural, and enzymatic proteins are required for the complicated process of wood formation. To function properly, proteins must interact with other proteins. Yet, very few of the protein-protein interactions necessary for wood formation are known. The main objectives of this project were to 1) identify new protein-protein interactions relevant to wood formation, and 2) perform in-depth characterizations of selected protein-protein interactions. To identify relevant protein-protein interactions, we cloned a set of approximately 400 genes that were highly expressed in the wood-forming tissue (known as secondary xylem) of poplar (Populus trichocarpa). We tested whether the proteins encoded by these biomass genes interacted with each other in a binary matrix design using the yeast two-hybrid (Y2H) method for protein-protein interaction discovery. We also tested a subset of the 400 biomass proteins for interactions with all proteins present in wood-forming tissue of poplar in a biomass library screen design using Y2H. Together, these two Y2H screens yielded over 270 interactions involving over 75 biomass proteins. For the second main objective we selected several interacting pairs or groups of interacting proteins for in-depth characterizations. Characterizations involved both in vivo and in vitro independent methods to confirm protein-protein interactions and the evaluation of novel phenotypes resulting from creation of transgenic poplar and Arabidopsis plants engineered for increased or decreased expression of the selected genes. Transgenic poplar trees were studied in growth chamber, greenhouse, and two separate replicated field trials involving over 25 distinct wood-associated proteins. In-depth characterizations yielding positive results include the following. First, a NAC domain transcription factor (NAC154) that is a promoter of stress response and dormancy in trees was discovered. Increasing expression of NAC154 caused stunted growth and premature senescence, while decreasing expression led to both delayed bud and leaf expansion in spring and delayed leaf drop (i.e., prolonged leaf retention) in fall. Second, we discovered and characterized a new connection between a negative regulator of wood formation, the NAC domain transcription factor XND1, and an important regulator of cell division and cell differentiation, RBR. Third, we identified a new network of interacting wood-associated transcription factors belonging to the MYB and HD families. One of the HD family proteins, WOX13, was used to prepare transgenic poplar for high-level expression, resulting in significantly increased lateral branch growth. Finally, we modeled and performed in vitro analyses of the insect protein rubber resilin and we prepared transgenic Arabidopsis plants for expression of resilin to test the feasibility of using resilin to modify lignin cross-linking in wood and reduce recalcitrance and improve yield of fermentable sugars for biofuels production. Analysis of these and additional transgenics created with this support is continuing.« less

Feasibility study of transportation management strategies in the Poplar Corridor, Memphis, Tennessee

DOE Office of Scientific and Technical Information (OSTI.GOV)

Siniard, D.

1990-02-01

This report documents the development and implementation of various transportation management strategies aimed at alleviating traffic congestion problems in the Poplar Corridor, a major transportation corridor located in a rapidly growing suburban area of Memphis, Tennessee. The project provided the opportunity for local governments to work with the private sector in a joint venture to address traffic congestion problems and to promote more efficient use of the area's transportation network. The project was carried out by the staff of Memphis Area Rideshare, a joint city/county agency which provides transit information and free carpool/vanpool computer matching services to area commuters. Publicmore » sector participants in the planning process included transportation and land use planners from the Office of Planning and Development, city traffic engineers, and representatives from the Memphis Area Transit Authority (MATA). Private sector input came from major developers and employers in the Poplar Corridor and from officials of schools located in the area.« less

Micro-Spectroscopic Imaging of Lignin-Carbohydrate Complexes in Plant Cell Walls and Their Migration During Biomass Pretreatment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zeng, Yining; Zhao, Shuai; Wei, Hui

2015-04-27

In lignocellulosic biomass, lignin is the second most abundant biopolymer. In plant cell walls, lignin is associated with polysaccharides to form lignin-carbohydrate complexes (LCC). LCC have been considered to be a major factor that negatively affects the process of deconstructing biomass to simple sugars by cellulosic enzymes. Here, we report a micro-spectroscopic approach that combines fluorescence lifetime imaging microscopy and Stimulated Raman Scattering microscopy to probe in situ lignin concentration and conformation at each cell wall layer. This technique does not require extensive sample preparation or any external labels. Using poplar as a feedstock, for example, we observe variation ofmore » LCC in untreated tracheid poplar cell walls. The redistribution of LCC at tracheid poplar cell wall layers is also investigated when the chemical linkages between lignin and hemicellulose are cleaved during pretreatment. Our study would provide new insights into further improvement of the biomass pretreatment process.« less

Characterization of white poplar and eucalyptus after ionic liquid pretreatment as a function of biomass loading using X-ray diffraction and small angle neutron scattering

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yuan, Xueming; Duan, Yonghao; He, Lilin

A systematic study was done to understand interactions among biomass loading during ionic liquid (IL) pretreatment, biomass type and biomass structures. White poplar and eucalyptus samples were pretreated using 1-ethyl-3-methylimidazolium acetate (EmimOAc) at 110 °C for 3 h at biomass loadings of 5, 10, 15, 20 and 25 wt%. All of the samples were chemically characterized and tested for enzymatic hydrolysis. Physical structures including biomass crystallinity and porosity were measured by X-ray diffraction (XRD) and small angle neutron scattering (SANS), respectively. SANS detected pores of radii ranging from ~25 to 625 Å, enabling assessment of contributions of pores with different sizes to increased porositymore » after pretreatment. Contrasting dependences of sugar conversion on white poplar and eucalyptus as a function of biomass loading were observed and cellulose crystalline structure was found to play an important role.« less

Characterization of white poplar and eucalyptus after ionic liquid pretreatment as a function of biomass loading using X-ray diffraction and small angle neutron scattering.

PubMed

Yuan, Xueming; Duan, Yonghao; He, Lilin; Singh, Seema; Simmons, Blake; Cheng, Gang

2017-05-01

A systematic study was performed to understand interactions among biomass loading during ionic liquid (IL) pretreatment, biomass type and biomass structures. White poplar and eucalyptus samples were pretreated using 1-ethyl-3-methylimidazolium acetate (EmimOAc) at 110°C for 3h at biomass loadings of 5, 10, 15, 20 and 25wt%. All of the samples were chemically characterized and tested for enzymatic hydrolysis. Physical structures including biomass crystallinity and porosity were measured by X-ray diffraction (XRD) and small angle neutron scattering (SANS), respectively. SANS detected pores of radii ranging from ∼25 to 625Å, enabling assessment of contributions of pores with different sizes to increased porosity after pretreatment. Contrasting dependences of sugar conversion on white poplar and eucalyptus as a function of biomass loading were observed and cellulose crystalline structure was found to play an important role. Copyright © 2017 Elsevier Ltd. All rights reserved.

Seasonal variation in hybrid poplar tolerance to glyphosate.

Treesearch

Daniel Netzer; Edward Hansen

1992-01-01

Reports that glyphosate applied during April or May in hybrid poplar plantations usually results in tree growth increases and that later summer applications often result in tree damage, growth loss, or mortality. Introduces the concept of "physiological" and "morphological" herbicide tolerance.

Overrun in Second-Growth Yellow-Poplar

Treesearch

Robert A. Campbell

1959-01-01

Second-growth yellow-poplar is reaching merchantable size in the Southern Appalachians in increasing quantities each year. Although the timber is young and logs are small, it produces lumber of sufficiently high quality to supply the needs of Carolina wood-using industries.

Metabolic Responses of Poplar to Apripona germari (Hope) as Revealed by Metabolite Profiling

PubMed Central

Wang, Lijuan; Qu, Liangjian; Zhang, Liwei; Hu, Jianjun; Tang, Fang; Lu, Mengzhu

2016-01-01

Plants have developed biochemical responses to adapt to biotic stress. To characterize the resistance mechanisms in poplar tree against Apripona germari, comprehensive metabolomic changes of poplar bark and xylem in response to A. germari infection were examined by gas chromatography time-of-flight mass spectrometry (GC–TOF/MS). It was found that, four days after feeding (stage I), A. germari infection brought about changes in various metabolites, such as phenolics, amino acids and sugars in both bark and xylem. Quinic acid, epicatechin, epigallocatechin and salicin might play a role in resistance response in bark, while coniferyl alcohol, ferulic acid and salicin contribute resistance in xylem. At feeding stages II when the larvae fed for more than one month, fewer defensive metabolites were induced, but levels of many intermediates of glycolysis and the tricarboxylic acid (TCA) cycle were reduced, especially in xylem. These results suggested that the defense strategies against A. germari might depend mainly on the early defense responses in poplar. In addition, it was found that bark and xylem in infected trees accumulated higher levels of salicylic acid and 4-aminobutyric acid, respectively, these tissues displaying a direct and systemic reaction against A. germari. However, the actual role of the two metabolites in A. germari-induced defense in poplar requires further investigation. PMID:27331808

Chemical and isotopic changes in Williston Basin brines during long-term oil production: An example from the Poplar dome, Montana

USGS Publications Warehouse

Peterman, Zell; Thamke, Joanna N.

2016-01-01

Brine samples were collected from 30 conventional oil wells producing mostly from the Charles Formation of the Madison Group in the East and Northwest Poplar oil fields on the Fort Peck Indian Reservation, Montana. Dissolved concentrations of major ions, trace metals, Sr isotopes, and stable isotopes (oxygen and hydrogen) were analyzed to compare with a brine contaminant that affected groundwater northeast of the town of Poplar. Two groups of brine compositions, designated group I and group II, are identified on the basis of chemistry and 87Sr/86Sr ratios. The solute chemistry and Sr isotopic composition of group I brines are consistent with long-term residency in Mississippian carbonate rocks, and brines similar to these contaminated the groundwater. Group II brines probably resided in clastic rocks younger than the Mississippian limestones before moving into the Poplar dome to replenish the long-term fluid extraction from the Charles Formation. Collapse of strata at the crest of the Poplar dome resulting from dissolution of Charles salt in the early Paleogene probably developed pathways for the ingress of group II brines from overlying clastic aquifers into the Charles reservoir. Such changes in brine chemistry associated with long-term oil production may be a widespread phenomenon in the Williston Basin.

Structural Alterations of Lignins in Transgenic Poplars with Depressed Cinnamyl Alcohol Dehydrogenase or Caffeic Acid O-Methyltransferase Activity Have an Opposite Impact on the Efficiency of Industrial Kraft Pulping1

PubMed Central

Lapierre, Catherine; Pollet, Brigitte; Petit-Conil, Michel; Toval, Gabriel; Romero, Javier; Pilate, Gilles; Leplé, Jean-Charles; Boerjan, Wout; Ferret, Valérie; De Nadai, Véronique; Jouanin, Lise

1999-01-01

We evaluated lignin profiles and pulping performances of 2-year-old transgenic poplar (Populus tremula × Populus alba) lines severely altered in the expression of caffeic acid/5-hydroxyferulic acid O-methyltransferase (COMT) or cinnamyl alcohol dehydrogenase (CAD). Transgenic poplars with CAD or COMT antisense constructs showed growth similar to control trees. CAD down-regulated poplars displayed a red coloration mainly in the outer xylem. A 90% lower COMT activity did not change lignin content but dramatically increased the frequency of guaiacyl units and resistant biphenyl linkages in lignin. This alteration severely lowered the efficiency of kraft pulping. The Klason lignin level of CAD-transformed poplars was slightly lower than that of the control. Whereas CAD down-regulation did not change the frequency of labile ether bonds or guaiacyl units in lignin, it increased the proportion of syringaldehyde and diarylpropane structures and, more importantly with regard to kraft pulping, of free phenolic groups in lignin. In the most depressed line, ASCAD21, a substantially higher content in free phenolic units facilitated lignin solubilization and fragmentation during kraft pulping. These results point the way to genetic modification of lignin structure to improve wood quality for the pulp industry. PMID:9880356

Multidimensional High-Resolution Magic Angle Spinning and Solution-State NMR Characterization of 13C-labeled Plant Metabolites and Lignocellulose

PubMed Central

Mori, Tetsuya; Tsuboi, Yuuri; Ishida, Nobuhiro; Nishikubo, Nobuyuki; Demura, Taku; Kikuchi, Jun

2015-01-01

Lignocellulose, which includes mainly cellulose, hemicellulose, and lignin, is a potential resource for the production of chemicals and for other applications. For effective production of materials derived from biomass, it is important to characterize the metabolites and polymeric components of the biomass. Nuclear magnetic resonance (NMR) spectroscopy has been used to identify biomass components; however, the NMR spectra of metabolites and lignocellulose components are ambiguously assigned in many cases due to overlapping chemical shift peaks. Using our 13C-labeling technique in higher plants such as poplar samples, we demonstrated that overlapping peaks could be resolved by three-dimensional NMR experiments to more accurately assign chemical shifts compared with two-dimensional NMR measurements. Metabolites of the 13C-poplar were measured by high-resolution magic angle spinning NMR spectroscopy, which allows sample analysis without solvent extraction, while lignocellulose components of the 13C-poplar dissolved in dimethylsulfoxide/pyridine solvent were analyzed by solution-state NMR techniques. Using these methods, we were able to unambiguously assign chemical shifts of small and macromolecular components in 13C-poplar samples. Furthermore, using samples of less than 5 mg, we could differentiate between two kinds of genes that were overexpressed in poplar samples, which produced clearly modified plant cell wall components. PMID:26143886

Investigating Mass Transport Limitations on Xylan Hydrolysis During Dilute Acid Pretreatment of Poplar

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mittal, Ashutosh; Pilath, Heid M.; Parent, Yves

2014-04-28

Mass transport limitations could be an impediment to achieving high sugar yields during biomass pretreatment and thus be a critical factor in the economics of biofuels production. The objective of this work was to study the mass transfer restrictions imposed by the structure of biomass on the hydrolysis of xylan during dilute acid pretreatment of biomass. Mass transfer effects were studied by pretreating poplar wood at particle sizes ranging from 10 micrometers to 10 mm. This work showed a significant reduction in the rate of xylan hydrolysis in poplar when compared to the intrinsic rate of hydrolysis for isolated xylanmore » that is possible in the absence of mass transfer. In poplar samples we observed no significant difference in the rates of xylan hydrolysis over more than two orders of magnitude in particle size. It appears that no additional mass transport restrictions are introduced by increasing particle size from 10 micrometers to 10 mm. This work suggests that the rates of xylan hydrolysis in biomass particles are limited primarily by the diffusion of hydrolysis products out of plant cell walls. A mathematical description is presented to describe the kinetics of xylan hydrolysis that includes transport of the hydrolysis products through biomass into the bulk solution. The modeling results show that the effective diffusion coefficient of the hydrolysis products in the cell wall is several orders of magnitude smaller than typical values in other applications signifying the role of plant cell walls in offering resistance to diffusion of the hydrolysis products.« less

Weed Control for Establishing Intensively Cultured Hybrid Poplar Plantations

Treesearch

Edward Hansen; Daniel Netzer; W.J. Rietveld

1984-01-01

Compares effeects of various wee-control methods, including hericides, cultivation, and legume cover crop, on tree survival and height growth of 2-year-old hybrid poplars. Cultivation and herbicides singly or in combination gave consistently better results than the other treatment tested.

Isoprene in poplar emissions: effects on new particle formation and OH concentrations

NASA Astrophysics Data System (ADS)

Kiendler-Scharr, A.; Andres, S.; Bachner, M.; Behnke, K.; Broch, S.; Hofzumahaus, A.; Holland, F.; Kleist, E.; Mentel, T. F.; Rubach, F.; Springer, M.; Steitz, B.; Tillmann, R.; Wahner, A.; Schnitzler, J.-P.; Wildt, J.

2012-01-01

Stress-induced volatile organic compound (VOC) emissions from transgenic Grey poplar modified in isoprene emission potential were used for the investigation of photochemical secondary organic aerosol (SOA) formation. In poplar, acute ozone stress induces the emission of a wide array of VOCs dominated by sesquiterpenes and aromatic VOCs. Constitutive light-dependent emission of isoprene ranged between 66 nmol m-2 s-1 in non-transgenic controls (wild type WT) and nearly zero (<0.5 nmol m-2 s-1) in isoprene emission-repressed plants (line RA22), respectively. Nucleation rates of up to 3600 cm-3 s-1 were observed in our experiments. In the presence of isoprene new particle formation was suppressed compared to non-isoprene containing VOC mixtures. Compared to isoprene/monoterpene systems emitted from other plants the suppression of nucleation by isoprene was less effective for the VOC mixture emitted from stressed poplar. This is explained by the observed high efficiency of new particle formation for emissions from stressed poplar. Direct measurements of OH in the reaction chamber revealed that the steady state concentration of OH is lower in the presence of isoprene than in the absence of isoprene, supporting the hypothesis that isoprenes' suppressing effect on nucleation is related to radical chemistry. In order to test whether isoprene contributes to SOA mass formation, fully deuterated isoprene (C5D8) was added to the stress-induced emission profile of an isoprene free poplar mutant. Mass spectral analysis showed that, despite the isoprene-induced suppression of particle formation, fractions of deuterated isoprene were incorporated into the SOA. A fractional mass yield of 2.3% of isoprene was observed. Future emission changes due to land use and climate change may therefore affect both gas phase oxidation capacity and new particle number formation.

Isoprene in poplar emissions: effects on new particle formation and OH concentrations

NASA Astrophysics Data System (ADS)

Kiendler-Scharr, A.; Andres, S.; Bachner, M.; Behnke, K.; Broch, S.; Hofzumahaus, A.; Holland, F.; Kleist, E.; Mentel, T. F.; Rubach, F.; Springer, M.; Steitz, B.; Tillmann, R.; Wahner, A.; Schnitzler, J.-P.; Wildt, J.

2011-08-01

Stress-induced volatile organic compound (VOC) emissions from transgenic Grey poplar, modified in isoprene emission potential were used for the investigation of photochemical secondary organic aerosol (SOA) formation. Nucleation rates of up to 3600 cm-3 s-1 were observed in our experiments. In poplar, acute ozone stress induces the emission of a wide array of VOCs dominated by sesquiterpenes and aromatic VOCs. Constitutive light-dependent emission of isoprene ranged between 66 nmol m-2 s-1 in non-transgenic controls (wild type WT) and nearly zero (<0.5 nmol m-2 s-1) in isoprene emission-repressed lines (line RA22), respectively. In the presence of isoprene new particle formation was suppressed compared to non-isoprene containing VOC mixtures. Compared to isoprene/monoterpene systems emitted from other plants the suppression of nucleation by isoprene was less effective for the VOC mixture emitted from stressed poplar. This is explained by the observed high efficiency of new particle formation for emissions from stressed poplar. Direct measurements of OH in the reaction chamber revealed that the steady state concentration of OH is lower in the presence of isoprene than in the absence of isoprene, supporting the hypothesis that isoprenes' suppressing effect on nucleation is related to radical chemistry. In order to test whether isoprene contributes to SOA mass formation, fully deuterated isoprene (C5D8) was added to the stress-induced emission profile of an isoprene free poplar mutant. Mass spectral analysis showed that, despite the isoprene-induced suppression of particle formation, fractions of deuterated isoprene were incorporated into the SOA. A fractional mass yield of 2.3 % of isoprene was observed. Future emission changes due to land use and climate change may therefore affect both gas phase oxidation capacity and new particle number formation.

Greater efficiency of water use in poplar clones having a delayed response of mesophyll conductance to drought.

PubMed

Théroux Rancourt, Guillaume; Éthier, Gilbert; Pepin, Steeve

2015-02-01

Improvement of water use efficiency is a key objective to improve the sustainability of cultivated plants, especially fast growing species with high water consumption like poplar. It is well known that water use efficiency (WUE) varies considerably among poplar genotypes, and it was recently suggested that the use of the mesophyll-to-stomatal conductance ratio (gm/gs) would be an appropriate trait to improve WUE. The responses of 7-week-old cuttings of four hybrid poplar clones and one native Balsam poplar (Populus balsamifera L.) to a water stress-recovery cycle were examined to evaluate the relation between the gm/gs ratio and transpiration efficiency (TE), a leaf-level component of WUE. A contrasting gs response to water stress was observed among the five clones, from stomatal closure early on during soil drying up to limited closure in Balsam poplar. However in the hybrids, the decline in gm was consistently delayed by a few days compared with gs. Moreover, in the most water use-efficient hybrids, the recovery following rehydration occurred faster for gm than for gs. Thus, the delay in the response of gm to drought and its faster recovery upon rewatering increased the gm/gs of the hybrids and this ratio scaled positively with TE. Our results support the use of the gm/gs ratio to select genotypes with improved WUE, and the notion that breeding strategies focusing mainly on stomatal responses to soil drying should also look for a strong curvilinearity between net carbon assimilation rate and gs, the indication of a significant increase in gm/gs in the earlier stages of stomatal closure. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Forest biorefinery: Potential of poplar phytochemicals as value-added co-products.

PubMed

Devappa, Rakshit K; Rakshit, Sudip K; Dekker, Robert F H

2015-11-01

The global forestry industry after experiencing a market downturn during the past decade has now aimed its vision towards the integrated biorefinery. New business models and strategies are constantly being explored to re-invent the global wood and pulp/paper industry through sustainable resource exploitation. The goal is to produce diversified, innovative and revenue generating product lines using on-site bioresources (wood and tree residues). The most popular product lines are generally produced from wood fibers (biofuels, pulp/paper, biomaterials, and bio/chemicals). However, the bark and other tree residues like foliage that constitute forest wastes, still remain largely an underexploited resource from which extractives and phytochemicals can be harnessed as by-products (biopharmaceuticals, food additives and nutraceuticals, biopesticides, cosmetics). Commercially, Populus (poplar) tree species including hybrid varieties are cultivated as a fast growing bioenergy crop, but can also be utilized to produce bio-based chemicals. This review identifies and underlines the potential of natural products (phytochemicals) from Populus species that could lead to new business ventures in biorefineries and contribute to the bioeconomy. In brief, this review highlights the importance of by-products/co-products in forest industries, methods that can be employed to extract and purify poplar phytochemicals, the potential pharmaceutical and other uses of >160 phytochemicals identified from poplar species - their chemical structures, properties and bioactivities, the challenges and limitations of utilizing poplar phytochemicals, and potential commercial opportunities. Finally, the overall discussion and conclusion are made considering the recent biotechnological advances in phytochemical research to indicate the areas for future commercial applications from poplar tree species. Crown Copyright © 2015. Published by Elsevier Inc. All rights reserved.

Locust sprouts reduce growth of yellow-poplar seedlings

Treesearch

Donald E. Beck; Charles E. McGee

1974-01-01

Dense thickets of black locust which often appear after clearcutting in the Southern Appalachians and Piedmont, can severely reduce growth of other desirable hardwoods. Released yellow-poplar seedlings were 51 percent taller and 79 percent larger in diameter than unreleased ones 6 years after treatment.

Distributing value gain from three growth factors for yellow-poplar

Treesearch

Roger E. McCay

1969-01-01

A method of apportioning the maximum dollar value gain from tree growth into the amounts contributed by diameter growth, merchantable height increase, and quality improvement is described. The results of this method are presented for various sizes and qualities of yellow-poplar trees.

Release Accelerates Growth of Yellow-Poplar -- an 18-Year Look

Treesearch

Robert D. Williams

1976-01-01

Yellow-poplar seedlings that germinated and were completely released from woody competition in 1957 (the first year after a harvest cut) were four times taller and five times larger in diameter after the 1973 growing season than seedlings that were not released.

Syringyl-rich lignin renders poplars more resistant to degradation by wood decay fungi.

PubMed

Skyba, Oleksandr; Douglas, Carl J; Mansfield, Shawn D

2013-04-01

In order to elucidate the effects of lignin composition on the resistance of wood to degradation by decay fungi, wood specimens from two transgenic poplar lines expressing an Arabidopsis gene encoding ferulate 5-hydroxylase (F5H) driven by the cinnimate-4-hydroxylase promoter (C4H::F5H) that increased syringyl/guaiacyl (S/G) monolignol ratios relative to those in the untransformed control wood were incubated with six different wood decay fungi. Alterations in wood weight and chemical composition were monitored over the incubation period. The results showed that transgenic poplar lines extremely rich in syringyl lignin exhibited a drastically improved resistance to degradation by all decay fungi evaluated. Lignin monomer composition and its distribution among cell types and within different cell layers were the sole wood chemistry parameters determining wood durability. Since transgenic poplars with exceedingly high syringyl contents were recalcitrant to degradation, where wood durability is a critical factor, these genotypes may offer improved performance.

Syringyl-Rich Lignin Renders Poplars More Resistant to Degradation by Wood Decay Fungi

PubMed Central

Skyba, Oleksandr; Douglas, Carl J.

2013-01-01

In order to elucidate the effects of lignin composition on the resistance of wood to degradation by decay fungi, wood specimens from two transgenic poplar lines expressing an Arabidopsis gene encoding ferulate 5-hydroxylase (F5H) driven by the cinnimate-4-hydroxylase promoter (C4H::F5H) that increased syringyl/guaiacyl (S/G) monolignol ratios relative to those in the untransformed control wood were incubated with six different wood decay fungi. Alterations in wood weight and chemical composition were monitored over the incubation period. The results showed that transgenic poplar lines extremely rich in syringyl lignin exhibited a drastically improved resistance to degradation by all decay fungi evaluated. Lignin monomer composition and its distribution among cell types and within different cell layers were the sole wood chemistry parameters determining wood durability. Since transgenic poplars with exceedingly high syringyl contents were recalcitrant to degradation, where wood durability is a critical factor, these genotypes may offer improved performance. PMID:23396333

Effect of lignin content on changes occurring in poplar cellulose ultrastructure during dilute acid pretreatment

DOE PAGES

Sun, Qining; Foston, Marcus; Meng, Xianzhi; ...

2014-10-14

Obtaining a better understanding of the complex mechanisms occurring during lignocellulosic deconstruction is critical to the continued growth of renewable biofuel production. A key step in bioethanol production is thermochemical pretreatment to reduce plant cell wall recalcitrance for downstream processes. Previous studies of dilute acid pretreatment (DAP) have shown significant changes in cellulose ultrastructure that occur during pretreatment, but there is still a substantial knowledge gap with respect to the influence of lignin on these cellulose ultrastructural changes. This study was designed to assess how the presence of lignin influences DAP-induced changes in cellulose ultrastructure, which might ultimately have largemore » implications with respect to enzymatic deconstruction efforts. Native, untreated hybrid poplar (Populus trichocarpa x Populus deltoids) samples and a partially delignified poplar sample (facilitated by acidic sodium chlorite pulping) were separately pretreated with dilute sulfuric acid (0.10 M) at 160°C for 15 minutes and 35 minutes, respectively . Following extensive characterization, the partially delignified biomass displayed more significant changes in cellulose ultrastructure following DAP than the native untreated biomass. With respect to the native untreated poplar, delignified poplar after DAP (in which approximately 40% lignin removal occurred) experienced: increased cellulose accessibility indicated by increased Simons’ stain (orange dye) adsorption from 21.8 to 72.5 mg/g, decreased cellulose weight-average degree of polymerization (DP w) from 3087 to 294 units, and increased cellulose crystallite size from 2.9 to 4.2 nm. These changes following DAP ultimately increased enzymatic sugar yield from 10 to 80%. We conclude that, overall, the results indicate a strong influence of lignin content on cellulose ultrastructural changes occurring during DAP. With the reduction of lignin content during DAP, the enlargement of cellulose microfibril dimensions and crystallite size becomes more apparent. Further, this enlargement of cellulose microfibril dimensions is attributed to specific processes, including the co-crystallization of crystalline cellulose driven by irreversible inter-chain hydrogen bonding (similar to hornification) and/or cellulose annealing that converts amorphous cellulose to paracrystalline and crystalline cellulose. Essentially, lignin acts as a barrier to prevent cellulose crystallinity increase and cellulose fibril coalescence during DAP.« less

Case history development of a hybrid poplar nursery at Reynolds Metals Company, Massena, NY. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marler, R.L.

1983-03-01

The methods used to establish the hybrid poplar nursery and the results obtained in the first year's operation are discussed. It also documents the history of the project. Hybrid poplar clones were established in the nursery in 1980 and their growth performance was evaluated after one growing season. The results were most promising. The mean survivability rate ranged from 84.92% to 90.58% per clone, while the clone height growth ranged from 58.16 inches to 76.47 inches over the first growing season. Approximately 71,000 cuttings were estimated to be available for outplanting during the Spring of 1982.

Mycorrhizae of poplars

Treesearch

R. C. Schultz; J. G. Isebrands; P. P. Kormanik

1983-01-01

Poplar hybrids, being screened for short-rotation intensive culture, can form ecto-, endo-, or ectendo-mycorrhizae or may be autotrophic. Different sections of the genus Populus tend to be selective in the type of mycorrhizae formed. Knowledge of which types are formed influences the kinds of propagule production, site preparation, and herbicide...

Soil Requirements for Aigeiros Poplar Plantations

Treesearch

James B. Baker; W. M. Broadfoot

1976-01-01

Information about soil requirements and site selection for poplars is reviewed; and a new technique for evaluating potential sites for planting eastern cottonwood (Populus deltoides Bartr.) in the United States is proposed. This method should serve as a practical field aid in site evaluation for cottonwood. If modified for...

Rating poplars for Melampsora leaf rust infection

Treesearch

Ernst J. Schreiner

1959-01-01

Melampsora leaf rust occurs in all countries where poplars are native or where they have been introduced for ornamental use or timber culture. The rust is easily recognized by the bright orange-yellow spore masses on the undersides of the leaves during most of the growing season.

76 FR 4725 - Apria Healthcare Customer Service Department; Fourteen Locations in Missouri Cameron, Cape...

Federal Register 2010, 2011, 2012, 2013, 2014

2011-01-26

..., Fenton, Joplin, Lee's Summit, Pleasant Valley, Poplar Bluff, Rolla, Springfield, St. Joseph, St. Peters... in Missouri: Cameron, Cape Girardeau, Columbia, Farmington, Fenton, Joplin, Lee's Summit, Pleasant..., Farmington, Fenton, Joplin, Lee's Summit, Pleasant Valley, Poplar Bluff, Rolla, Springfield, St. Joseph, St...

ISOPOOH interacting with plant surfaces - a new source of MVK?

NASA Astrophysics Data System (ADS)

Canaval, Eva; Partoll, Eva Maria; Mentler, Bernhard; Keutsch, Frank; Schnitzler, Jörg-Peter; Hansel, Armin

2017-04-01

Isoprene is the most dominant BVOC emitted into the atmosphere. In rural areas with low concentrations of NOx Isoprene can rapidly react with hydroxyl radicals forming several isoprene hydroxy hydroperoxide (ISOPOOH) isomeres. It is known that ISOPOOH undergoes catalytical conversion on metal surfaces forming MVK and MACR and other oxygenated species. Thus, standard PTR-MS instruments containing metal drift rings convert ISOPOOH to MVK and MACR and cannot measure ISOPOOH artifact free. In our studies we were interested in the surfaces catalyzed reactions of ISOPOOH on plant surfaces. For this aim we used poplar plants, which represent a major biomass producing species. For the experiments the poplars were placed in an enclosure setup with only PTFE, PFA and PEEK as ISOPOOH showed negligible decomposition on those materials. ISOPOOH was mixed quantitatively to the air stream with a Liquid Calibration Unit resulting in volume mixing ratios of 8-50 ppbv. A novel Switchable-Reagent-Ion-Time-of-Flight-MS (SRI-ToF-MS) instrument containing conductive peek drift rings was used to analyze the VOC composition switching between enclosure inlet and outlet in real-time. The use of H_3O+ and NH_4+ as reagent ions allows the fragmention free measurement of isoprene peroxides and C_5-diols. We investigated day/night (stomatal open-closed) changes and found under daytime conditions a strong uptake of ISOPOOH and a clear emission of MVK for low and high concentrations of ISOPOOH. Fumigation with 8-10 ppbv ISOPOOH under night conditions the poplar showed only a small uptake of ISOPOOH accompanied by no visible MVK emissions. But fumigation of poplar with 50 ppbv showed a clear uptake during night time conditions. This indicates that the plant surfaces also play an important role in producing MVK while undergoing surface assisted reactions with ISOPOOH. Moreover during long fumigation (6-8 h) with ISOPOOH the majority of investigated poplars showed increasing levels of stress indicating compounds like methyl salicylate.

Characterization and 2D structural model of corn straw and poplar leaf biochars.

PubMed

Zhao, Nan; Lv, YiZhong; Yang, XiXiang; Huang, Feng; Yang, JianWen

2017-12-22

The integrated experimental methods were used to analyze the physicochemical properties and structural characteristics and to build the 2D structural model of two kinds of biochars. Corn straw and poplar leaf biochars were gained by pyrolysing the raw materials slowly in a furnace at 300, 500, and 700 °C under oxygen-deficient conditions. Scanning electron microscope was applied to observe the surface morphology of the biochars. High temperatures destroyed the pore structures of the biochars, forming a particle mixture of varying sizes. The ash content, yield, pH, and surface area were also observed to describe the biochars' properties. The yield decreases as the pyrolysis temperature increases. The biochars are neutral to alkaline. The biggest surface area is 251.11 m 2 /g for 700 °C corn straw biochar. Elemental analysis, infrared microspectroscopy, solid-state C-13 NMR spectroscopy, and pyrolysis gas chromatography-mass spectrometry (Py-GC-MS) were also used to study the structural characteristics and build the 2D structural models of biochars. The C content in the corn straw and poplar leaf biochars increases with the increase of the pyrolysis temperature. A higher pyrolysis temperature makes the aryl carbon increase, and C=O, OH, and aliphatic hydrocarbon content decrease in the IR spectra. Solid-state C-13 NMR spectra show that a higher pyrolysis temperature makes the alkyl carbon and alkoxy carbon decrease and the aryl carbon increase. The results of IR microspectra and solid-state C-13 NMR spectra reveal that some noticeable differences exist in these two kinds of biochars and in the same type of biochar but under different pyrolysis temperatures. The conceptual elemental compositions of 500 °C corn straw and poplar leaf biochars are C 61 H 33 NO 13 and C 59 H 41 N 3 O 12 , respectively. Significant differences exist in the SEM images, physicochemical properties, and structural characteristics of corn straw and poplar leaf biochars.

Evaluation of biomass quality of selected woody species depending on the soil enrichment practice

NASA Astrophysics Data System (ADS)

Stolarski, Mariusz J.; Krzyżaniak, Michał; Załuski, Dariusz; Niksa, Dariusz

2018-01-01

Perennial energy crops are a source of the bio-mass used to generate energy. The aim of this study was to determine the chemical and thermophysical parameters of short rotation woody crops (black locust, poplar and willow), depending on soil enrichment practice (mineral fertilisation, lignin and mycorrhiza), in three- and four-year harvest cycles. In the study, the thermophysical properties and elemental composition of the biomass were determined. All analyses were performed in trip-licate according to the standards. The fresh black locust biomass had the lowest moisture content, which resulted in the best lower heating value (10.16 MJ kg-1, on average) in the four-year harvest cycle. The poplar biomass had the greatest higher heating value, fixed carbon, carbon and ash content, the highest concentrations of which were found in the biomass in which lignin was applied (2.00% d.m.). On the other hand, the willow biomass contained the lowest concentrations of ash and fixed carbon. Soil enrichment significantly differentiated the quality parameters of black locust, poplar and willow. This effect is of particular importance to those who grow and use biomass as a fuel.

Remedial investigation/feasibility study of the Clinch River/Poplar Creek Operable Unit. Volume 3. Risk assessment information. Appendixes E, F

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1996-03-01

This report presents the findings of an investigation into contamination of the Clinch River and Poplar Creek near the U.S. Department of Energy`s (DOE`s) Oak Ridge Reservation (ORR) in eastern Tennessee. For more than 50 years, various hazardous and radioactive substances have been released to the environment as a result of operations and waste management activities at the ORR. In 1989, the ORR was placed on the National Priorities List (NPL), established and maintained under the federal Comprehensive Environmental Response, Compensation, and Liability Act of 1980 (CERCLA). Under CERCLA, NPL sites must be investigated to determine the nature and extentmore » of contamination at the site, assess the risk to human health and the environment posed by the site, and, if necessary, identify feasible remedial alternatives that could be used to clean the site and reduce risk. To facilitate the overall environmental restoration effort at the ORR, CERCLA activities are being implemented individually as distinct operable units (OUs). This document is Volume 3 of the combined Remedial Investigation and Feasibility Study Report for the Clinch River/Poplar Creek OU.« less

Remedial investigation/feasibility study of the Clinch River/Poplar Creek operable unit. Volume 3: Appendixes E and F -- Risk assessment information

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1996-06-01

This report presents the findings of an investigation into contamination of the Clinch River and Poplar Creek near the US Department of Energy`s (DOE`s) Oak Ridge Reservation (ORR) in eastern Tennessee. For more than 50 years, various hazardous and radioactive substances have been released to the environment as a result of operations and waste management activities at the ORR. In 1989, the ORR was placed on the National Priorities List (NPL), established and maintained under the federal Comprehensive Environmental Response, Compensation, and Liability Act of 1980 (CERCLA). Under CERCLA, NPL sites must be investigated to determine the nature and extentmore » of contamination at the site, assess the risk to human health and the environment posed by the site, and, if necessary, identify feasible remedial alternatives that could be used to clean the site and reduce risk. To facilitate the overall environmental restoration effort at the ORR, CERCLA activities are being implemented individually as distinct operable units (OUs). This document is the combined Remedial Investigation and Feasibility Study Report for the Clinch River/Poplar Creek OU.« less

Remedial investigation/feasibility study of the Clinch River/Poplar Creek Operable Unit. Volume 2. Biota and representative concentrations of contaminants. Appendixes A, B, C, D

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1996-03-01

This report presents the findings of an investigation into contamination of the Clinch River and Poplar Creek near the U.S. Department of Energy`s (DOE`s) Oak Ridge Reservation (ORR) in eastern Tennessee. For more than 50 years, various hazardous and radioactive substances have been released to the environment as a result of operations and waste management activities at the ORR. In 1989, the ORR was placed on the National Priorities List (NPL), established and maintained under the federal Comprehensive Environmental Response, Compensation, and Liability Act of 1980 (CERCLA). Under CERCLA, NPL sites must be investigated to determine the nature and extentmore » of contamination at the site, assess the risk to human health and the environment posed by the site, and, if necessary, identify feasible remedial alternatives that could be used to clean the site and reduce risk. To facilitate the overall environmental restoration effort at the ORR, CERCLA activities are being implemented individually as distinct operable units (OU`s). This document is the combined Remedial Investigation and Feasibility Study Report for the Clinch River/Poplar Creek OU.« less

Remedial investigation/feasibility study of the Clinch River/Poplar Creek Operable Unit. Volume 2. Appendixes A, B, C, and D-Biota and representative concentrations of contaminants

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1996-06-01

This report presents the findings of an investigation into contamination of the Clinch River and Poplar Creek near the U.S. Department of Energy`s (DOE`s) Oak Ridge Reservation (ORR) in eastern Tennessee. For more than 50 years, various hazardous and radioactive substances have been released to the environment as a result of operations and waste management activities at the ORR. In 1989, the ORR was placed on the National Priorities List (NPL), established and maintained under the federal Comprehensive Environmental Response, Compensation, and Liability Act of 1980 (CERCLA). Under CERCLA, NPL sites must be investigated to determine the nature and extentmore » of contamination at the site, assess the risk to human health and the environment posed by the site, and, if necessary, identify feasible remedial alternatives that could be used to clean the site and reduce risk. To facilitate the overall environmental restoration effort at the ORR, CERCLA activities are being implemented individually as distinct operable units (OUs). This document is Volume 2 of the combined Remedial Investigation and Feasibility Study Report for the Clinch River/Poplar Creek OU.« less

Effects of Heavy Metals and Arbuscular Mycorrhiza on the Leaf Proteome of a Selected Poplar Clone: A Time Course Analysis

PubMed Central

Lingua, Guido; Bona, Elisa; Todeschini, Valeria; Cattaneo, Chiara; Marsano, Francesco; Berta, Graziella; Cavaletto, Maria

2012-01-01

Arbuscular mycorrhizal (AM) fungi establish a mutualistic symbiosis with the roots of most plant species. While receiving photosynthates, they improve the mineral nutrition of the plant and can also increase its tolerance towards some pollutants, like heavy metals. Although the fungal symbionts exclusively colonize the plant roots, some plant responses can be systemic. Therefore, in this work a clone of Populus alba L., previously selected for its tolerance to copper and zinc, was used to investigate the effects of the symbiosis with the AM fungus Glomus intraradices on the leaf protein expression. Poplar leaf samples were collected from plants maintained in a glasshouse on polluted (copper and zinc contaminated) or unpolluted soil, after four, six and sixteen months of growth. For each harvest, about 450 proteins were reproducibly separated on 2DE maps. At the first harvest the most relevant effect on protein modulation was exerted by the AM fungi, at the second one by the metals, and at the last one by both treatments. This work demonstrates how importantly the time of sampling affects the proteome responses in perennial plants. In addition, it underlines the ability of a proteomic approach, targeted on protein identification, to depict changes in a specific pattern of protein expression, while being still far from elucidating the biological function of each protein. PMID:22761694

Overexpression of Poplar Pyrabactin Resistance-Like Abscisic Acid Receptors Promotes Abscisic Acid Sensitivity and Drought Resistance in Transgenic Arabidopsis.

PubMed

Yu, Jingling; Yang, Lei; Liu, Xiaobing; Tang, Renjie; Wang, Yuan; Ge, Haiman; Wu, Mengting; Zhang, Jiang; Zhao, Fugeng; Luan, Sheng; Lan, Wenzhi

2016-01-01

Drought stress is an important environmental factor limiting productivity of plants, especially fast growing species with high water consumption like poplar. Abscisic acid (ABA) is a phytohormone that positively regulates seed dormancy and drought resistance. The PYR1 (Pyrabactin Resistance 1)/ PYRL (PYR-Like)/ RCAR (Regulatory Component of ABA Receptor) (PYR/PYL/RCAR) ABA receptor family has been identified and widely characterized in Arabidopsis thaliana. However, their functions in poplars remain unknown. Here, we report that 2 of 14 PYR/PYL/RCAR orthologues in poplar (Populus trichocarpa) (PtPYRLs) function as a positive regulator of the ABA signal transduction pathway. The Arabidopsis transient expression and yeast two-hybrid assays showed the interaction among PtPYRL1 and PtPYRL5, a clade A protein phosphatase 2C, and a SnRK2, suggesting that a core signalling complex for ABA signaling pathway exists in poplars. Phenotypic analysis of PtPYRL1 and PtPYRL5 transgenic Arabidopsis showed that these two genes positively regulated the ABA responses during the seed germination. More importantly, the overexpression of PtPYRL1 and PtPYRL5 substantially improved ABA sensitivity and drought stress tolerance in transgenic plants. In summary, we comprehensively uncovered the properties of PtPYRL1 and PtPYRL5, which might be good target genes to genetically engineer drought-Resistant plants.

Lignin engineering in field-grown poplar trees affects the endosphere bacterial microbiome.

PubMed

Beckers, Bram; Op De Beeck, Michiel; Weyens, Nele; Van Acker, Rebecca; Van Montagu, Marc; Boerjan, Wout; Vangronsveld, Jaco

2016-02-23

Cinnamoyl-CoA reductase (CCR), an enzyme central to the lignin biosynthetic pathway, represents a promising biotechnological target to reduce lignin levels and to improve the commercial viability of lignocellulosic biomass. However, silencing of the CCR gene results in considerable flux changes of the general and monolignol-specific lignin pathways, ultimately leading to the accumulation of various extractable phenolic compounds in the xylem. Here, we evaluated host genotype-dependent effects of field-grown, CCR-down-regulated poplar trees (Populus tremula × Populus alba) on the bacterial rhizosphere microbiome and the endosphere microbiome, namely the microbiota present in roots, stems, and leaves. Plant-associated bacteria were isolated from all plant compartments by selective isolation and enrichment techniques with specific phenolic carbon sources (such as ferulic acid) that are up-regulated in CCR-deficient poplar trees. The bacterial microbiomes present in the endosphere were highly responsive to the CCR-deficient poplar genotype with remarkably different metabolic capacities and associated community structures compared with the WT trees. In contrast, the rhizosphere microbiome of CCR-deficient and WT poplar trees featured highly overlapping bacterial community structures and metabolic capacities. We demonstrate the host genotype modulation of the plant microbiome by minute genetic variations in the plant genome. Hence, these interactions need to be taken into consideration to understand the full consequences of plant metabolic pathway engineering and its relation with the environment and the intended genetic improvement.

Isolation and Characterization of cDNAs Encoding Leucoanthocyanidin Reductase and Anthocyanidin Reductase from Populus trichocarpa

PubMed Central

Lu, Wanxiang; Yang, Li; Karim, Abdul; Luo, Keming

2013-01-01

Proanthocyanidins (PAs) contribute to poplar defense mechanisms against biotic and abiotic stresses. Transcripts of PA biosynthetic genes accumulated rapidly in response to infection by the fungus Marssonina brunnea f.sp. multigermtubi, treatments of salicylic acid (SA) and wounding, resulting in PA accumulation in poplar leaves. Anthocyanidin reductase (ANR) and leucoanthocyanidin reductase (LAR) are two key enzymes of the PA biosynthesis that produce the main subunits: (+)-catechin and (−)-epicatechin required for formation of PA polymers. In Populus, ANR and LAR are encoded by at least two and three highly related genes, respectively. In this study, we isolated and functionally characterized genes PtrANR1 and PtrLAR1 from P. trichocarpa. Phylogenetic analysis shows that Populus ANR1 and LAR1 occurr in two distinct phylogenetic lineages, but both genes have little difference in their tissue distribution, preferentially expressed in roots. Overexpression of PtrANR1 in poplar resulted in a significant increase in PA levels but no impact on catechin levels. Antisense down-regulation of PtrANR1 showed reduced PA accumulation in transgenic lines, but increased levels of anthocyanin content. Ectopic expression of PtrLAR1 in poplar positively regulated the biosynthesis of PAs, whereas the accumulation of anthocyanin and flavonol was significantly reduced (P<0.05) in all transgenic plants compared to the control plants. These results suggest that both PtrANR1 and PtrLAR1 contribute to PA biosynthesis in Populus. PMID:23741362

Impact of two iron(III) chelators on the iron, cadmium, lead and nickel accumulation in poplar grown under heavy metal stress in hydroponics.

PubMed

Mihucz, Victor G; Csog, Árpád; Fodor, Ferenc; Tatár, Enikő; Szoboszlai, Norbert; Silaghi-Dumitrescu, Luminiţa; Záray, Gyula

2012-04-15

Poplar (Populus jacquemontiana var. glauca cv. Kopeczkii) was grown in hydroponics containing 10 μM Cd(II), Ni(II) or Pb(II), and Fe as Fe(III) EDTA or Fe(III) citrate in identical concentrations. The present study was designed to compare the accumulation and distribution of Fe, Cd, Ni and Pb within the different plant compartments. Generally, Fe and heavy-metal accumulation were higher by factor 2-7 and 1.6-3.3, respectively, when Fe(III) citrate was used. Iron transport towards the shoot depended on the Fe(III) chelate and, generally, on the heavy metal used. Lead was accumulated only in the root. The amounts of Fe and heavy metals accumulated by poplar were very similar to those of cucumber grown in an identical way, indicating strong Fe uptake regulation of these two Strategy I plants: a cultivar and a woody plant. The Strategy I Fe uptake mechanism (i.e. reducing Fe(III) followed by Fe(II) uptake), together with the Fe(III) chelate form in the nutrient solution had significant effects on Fe and heavy metal uptake. Poplar appears to show phytoremediation potential for Cd and Ni, as their transport towards the shoot was characterized by 51-54% and 26-48% depending on the Fe(III) supply in the nutrient solution. Copyright © 2012 Elsevier GmbH. All rights reserved.

Proton-Dependent Coniferin Transport, a Common Major Transport Event in Differentiating Xylem Tissue of Woody Plants1[W

PubMed Central

Tsuyama, Taku; Kawai, Ryo; Shitan, Nobukazu; Matoh, Toru; Sugiyama, Junji; Yoshinaga, Arata; Takabe, Keiji; Fujita, Minoru; Yazaki, Kazufumi

2013-01-01

Lignin biosynthesis is an essential physiological activity of vascular plants if they are to survive under various environmental stresses on land. The biosynthesis of lignin proceeds in the cell wall by polymerization of precursors; the initial step of lignin polymerization is the transportation of lignin monomers from the cytosol to the cell wall, which is critical for lignin formation. There has been much debate on the transported form of the lignin precursor, either as free monolignols or their glucosides. In this study, we performed biochemical analyses to characterize the membrane transport mechanism of lignin precursors using angiosperms, hybrid poplar (Populus sieboldii × Populus grandidentata) and poplar (Populus sieboldii), as well gymnosperms, Japanese cypress (Chamaecyparis obtusa) and pine (Pinus densiflora). Membrane vesicles prepared from differentiating xylem tissues showed clear ATP-dependent transport activity of coniferin, whereas less than 4% of the coniferin transport activity was seen for coniferyl alcohol. Bafilomycin A1 and proton gradient erasers markedly inhibited coniferin transport in hybrid poplar membrane vesicles; in contrast, vanadate had no effect. Cis-inhibition experiments suggested that this transport activity was specific for coniferin. Membrane fractionation of hybrid poplar microsomes demonstrated that transport activity was localized to the tonoplast- and endomembrane-rich fraction. Differentiating xylem of Japanese cypress exhibited almost identical transport properties, suggesting the involvement of a common endomembrane-associated proton/coniferin antiport mechanism in the lignifying tissues of woody plants, both angiosperms and gymnosperms. PMID:23585651

Growth, photosynthesis, and herbicide tolerance of genetically modified hybrid poplar

Treesearch

Raymond A. Donahue; Tim D. Davis; Charles H. Michler; Don E. Riemenschneider; Doug R. Carter; Paula E. Marquardt; Daksha Sankhla; Narendra Sankhla; Bruce E. Haissig; J. G. Isebrands

1994-01-01

Poplar hybrids have high light-saturated photosynthetic rates and potential utility as a renewable biofuel, but they lack tolerance to commercially important herbicides that may be needed for successful plantation management. Tolerance to glyphosate (N-(phosphonomethyl)glycine) has been conferred to many plants by Agrobacterium-mediated transfor-...

Growth of yellow-poplar and associated species in West Virginia ...as a guide to selective cutting

Treesearch

Carl J. Holcomb; C. Allen Bickford

1952-01-01

Yellow-poplar (Liriodendron tulipifera L.) has long been recognized as a valuable species. Lumbermen prize the long, straight, clear boles. Foresters like its silvicultural attributes. They also regard well the other species that are associated with it: ash, basswood, birch, maple, and cherry.

Diameter Distributions in Natural Yellow-Poplar Stands

Treesearch

Charles E. McGee; Lino Della-Bianca

1967-01-01

Diameter distributions obtained from 141 pure, natural unthinned yellow-poplar stands in the Appalachian Mountains of Virginia, North Carolina, and Georgia are presented in tables. The distributions are described in relation to stand age, site index, and total number of trees per acre, and are useful for stand management planning.

Xylanase supplementation on enzymatic saccharification of dilute acid pretreated poplars at different severities

Treesearch

Chao Zhang; Xinshu Zhuang; Zhao Jiang Wang; Fred Matt; Franz St. John; J.Y. Zhu

2013-01-01

Three pairs of solid substrates from dilute acid pretreatment of two poplar wood samples were enzymatically hydrolyzed by cellulase preparations supplemented with xylanase. Supplementation of xylanase improved cellulose saccharification perhaps due to improved cellulose accessibility by xylan hydrolysis. Total xylan removal directly affected enzymatic cellulose...

Three new combinations in Drepanopeziza for species on poplar

USDA-ARS?s Scientific Manuscript database

Three species of Drepanopeziza that cause diseases of poplars have been known using scientific names for their sexual and asexual morphs, which is no longer allowed with the change to one scientific name for fungi. For each species, the oldest epithet is provided by the asexual morph; however, neith...

Yellow-Poplar: Characteristics and Management

Treesearch

Donald E. Beck; Lino Della-Bianca

1981-01-01

This reference tool and field guide for foresters and other landmanagers includes a synthesis of information on the characteristics of yellow-poplar with guidelines for managing the species. It is based on research conducted by many individuals in State and Federal forestry organizations and in universities throughout the Eastern United States. This handbook...

Symptoms of Nutrient Deficiency in Yellow-Poplar Seedlings

Treesearch

Albert F. Ike

1968-01-01

Visual symptoms are described for leaves of yellow-poplar seedlings supplied N, P. and K in varying concentrations ranging from minimal to excessive. Probability of growth responses to added N is high when tissue levels are below 2 percent; no response is likely when they exceed 3 percent.

Planting Depth of Hybrid Poplar Cuttings Influences Number of Shoots

Treesearch

Edward Hansen; David Tolsted; Matthew Tower

1991-01-01

Reports that planting unrooted hybrid poplar cuttings flush with the soil surface resulted in significantly fewer multiple-stem shoots compared to letting the cutting protrude 2.5 or 5.0 cm above the soil surface. There were no significant effects on shoot height growth or cutting mortality.

Final report from VFL Technologies for the pilot-scale thermal treatment of lower East Fork Poplar Creek floodplain soils. LEFPC appendices, Volume 4, Appendix V-C

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1994-09-01

This is the the final verification run data package for pilot scale thermal treatment of lower East Fork Poplar Creek floodplain soils. Included are data on volatiles, semivolatiles, and TCLP volatiles.

Effect of defoliation on carbohydrate content of yellow-poplar seedlings

Treesearch

Keith F. Jensen; Roberta G. Masters

1973-01-01

Sixty yellow-poplar seedlings were divided into two groups. One group was defoliated twice, and the second group served as the control. Three months after the second defoliation there was no difference in carbohydrate content between the defoliated and undefoliated seedlings in either the stems or roots.

A system for dosage-based functional genomics in poplar

Treesearch

Isabelle M. Henry; Matthew S. Zinkgraf; Andrew T. Groover; Luca Comai

2015-01-01

Altering gene dosage through variation in gene copy number is a powerful approach to addressing questions regarding gene regulation, quantitative trait loci, and heterosis, but one that is not easily applied to sexually transmitted species. Elite poplar (Populus spp) varieties are created through interspecific hybridization, followed by...

Development of a Southern Appalachian Hardwood Stand After Clearcutting

Treesearch

Donald E. Beck; Ralph M. Hooper

1986-01-01

A mixed hardwood stand composed of 53% oak (Quercus spp.), 33% yellow-poplar(Liriodendron tulipifera L.), and 14% other species, was clearcut in 1963. Twenty years later a developing, even-aged stand of predominantly sprout origin is dominated by yellow-poplar, black locust(Robinia pseudoacacia L.), redmaple (...

Intercropping with switchgrass improves net greenhouse gas balance in hybrid poplar plantations on a sand soil

USDA-ARS?s Scientific Manuscript database

Highly productive, commercial hybrid poplar plantations are being managed in the Pacific Northwest for high-value timber production at relatively low stocking densities under irrigation. The open understory was used to produce switchgrass (Panicum virgatum) prior to canopy closure. The objectives ...

Effect of poultry litter biochar on Saccharomyces cerevisiae growth and ethanol production from steam-exploded poplar and corn stover

NASA Astrophysics Data System (ADS)

Diallo, Oumou

The use of ethanol produced from lignocellulosic biomass for transportation fuel offers solutions in reducing environmental emission and the use of non-renewable fuels. However, lignocellulosic ethanol production is still hampered by economic and technical obstacles. For instance, the inhibitory effect of toxic compounds produced during biomass pretreatment was reported to inhibit the fermenting microorganisms, hence there was a decrease in ethanol yield and productivity. Thus, there is a need to improve the bioconversion of lignocellulosic biomass to ethanol in order to promote its commercialization. The research reported here investigated the use of poultry litter biochar to improve the ethanol production from steam-exploded poplar and corn stover. The effect of poultry litter biochar was first studied on Saccharomyces cerevisiae ATCC 204508/S288C growth, and second on the enzyme hydrolysis and fermentation of two steam-exploded biomasses: (poplar and corn stover). The third part of the study investigated optimal process parameters (biochar loading, biomass loading, and enzyme loading) on the reducing sugars production, and ethanol yield from steam-exploded corn stover. In this study, it has been shown that poultry litter biochar improved the S. cerevisiae growth and ethanol productivity; therefore poultry litter biochar could potentially be used to improve the ethanol production from steam-exploded lignocellulosic biomass.

Spatial variability of soil carbon and nitrogen in two hybrid poplar-hay crop systems in southern Quebec, Canada

NASA Astrophysics Data System (ADS)

Winans, K. S.

2013-12-01

Canadian agricultural operations contribute approximately 8% of national GHG emissions each year, mainly from fertilizers, enteric fermentation, and manure management (Environment Canada, 2010). With improved management of cropland and forests, it is possible to mitigate GHG emissions through carbon (C) sequestration while enhancing soil and crop productivity. Tree-based intercropped (TBI) systems, consisting of a fast-growing woody species such as poplar (Populus spp.) planted in widely-spaced rows with crops cultivated between tree rows, were one of the technologies prioritized for investigation by the Agreement for the Agricultural Greenhouse Gases Program (AAGGP), because fast growing trees can be a sink for atmospheric carbon-dioxide (CO2) as well as a long-term source of farm income (Montagnini and Nair, 2004). However, there are relatively few estimates of the C sequestration in the trees or due to tree inputs (e.g., fine root turnover, litterfall that gets incorporated into SOC), and hybrid poplars grow exponentially in the first 8-10 years after planting. With the current study, our objectives were (1) to evaluate spatial variation in soil C and nitrogen (N) storage, CO2 and nitrogen oxide (N20), and tree and crop productivity for two hybrid poplar-hay intercrop systems at year 9, comparing TBI vs. non-TBI systems, and (2) to evaluate TBI systems in the current context of C trading markets, which value C sequestration in trees, unharvested crop components, and soils of TBI systems. The study results will provide meaningful measures that indicate changes due to TBI systems in the short-term and in the long-term, in terms of GHG mitigation, enhanced soil and crop productivity, as well as the expected economic returns in TBI systems.

A heterogeneous boron distribution in soil influences the poplar root system architecture development

NASA Astrophysics Data System (ADS)

Rees, R.; Robinson, B. H.; Hartmann, S.; Lehmann, E.; Schulin, R.

2009-04-01

Poplars are well suited for the phytomanagement of boron (B)-contaminated sites, due to their high transpiration rate and tolerance to elevated soil B concentrations. However, the uptake and the fate of B in poplar stands are not well understood. This information is crucial to improve the design of phytomanagement systems, where the primary role of poplars is to reduce B leaching by reducing the water flux through the contaminated material. Like other trace elements, B occurs heterogeneously in soils. Concentrations can differ up to an order of magnitude within centimetres. These gradients affect plant root growth and thus via preferential flow along the roots water and mass transport in soils to ground and surface waters. Generally there are three possible reactions of plant roots to patches with elevated trace element concentrations in soils: indifference, avoidance, or foraging. While avoidance or indifference might seem to be the most obvious strategies, foraging cannot be excluded a priori, because of the high demand of poplars for B compared to other tree species. We aimed to determine the rooting strategies of poplars in soils where B is either homo- or heterogeneously distributed. We planted 5 cm cuttings of Populus tremula var. Birmensdorf clones in aluminum (Al) containers with internal dimensions of 64 x 67 x 1.2 cm. The soil used was subsoil from northern Switzerland with a naturally low B and organic C concentration. We setup two treatments and a control with three replicates each. We spiked a bigger and a smaller portion of the soil with the same amount of B(OH)3-salt, in order to obtain soil concentrations of 7.5 mg B kg-1 and 20 mg B kg-1. We filled the containers with (a) un-spiked soil, (b) the 7.5 mg B kg-1 soil and (c) heterogeneously. The heterogeneous treatment consisted of one third 20 mg B kg-1 soil and two thirds control soil. We grew the poplars in a small greenhouse over 2 months and from then on in a climate chamber for another 3 months. We irrigated the poplars with modified Hoagland's solution that contained no B. We imaged the roots in the soil every 3rd week using neutron radiography (NR) at the Paul-Scherrer Institute. Living roots can be visualised in soil by NR because of their higher water content compared to the surrounding soil. At the end of the growing period, the Al containers were opened and the soil surface was scanned by a standard office scanner. The soil in the containers was divided into nine equal portions representing different depths and spiked or un-spiked regions in soil profile. We separated roots and soil as well as the aerial parts (stems and leaves). We obtained data on root morphological parameters like root length and root density by evaluating scans of the washed root samples with an image evaluation software. All soil and plant samples were dried, weighed and analyzed for B and mineral nutrients using ICP-OES. Plant vitality parameters like water use, growth and number of living leaves did not show any reaction to the treatments. The oldest poplar leaves from poplars in the B-spiked treatments showed signs of light to serious necrosis. From the neutron radiographs it was apparent that poplar roots reached the walls of the Al- containers during the experiment. Primary roots grew at first strongly in lengths in horizontal as well as in vertical direction and only after this lateral root growth was visible. Although the filling and packing of the containers was done with great care to establish an ideally homogeneous soil profile settlement occurred in some containers resulting in gaps in the profile. However, roots growth did not seem to be deranged since roots simply crossed these gaps and continued growth in the adjacent soil patch. The complete results will be available at the time of the conference.

Remedial investigation/feasibility study for the Clinch River/Poplar Creek operable unit. Volume 3. Appendix E

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1995-09-01

This document contains Appendix E: Toxicity Information and Uncertainty Analysis, description of methods, from the combined Remedial Investigation/Feasibility Study Report for the Clinch River/Poplar Crack (CR/PC) Operable Unit (OU). The CR/PC OU is located in Anderson and Roane Counties, Tennessee and consists of the Clinch River and several of its embayments in Melton Hill and Watts Bar Reservoirs. These waters have received hazardous substances released over a period of 50 years from the US Department of Energy`s Oak Ridge Reservation (ORR), a National Priority List site established under the Comprehensive Environmental Response, Compensation, and Liability Act. A remedial investigation hasmore » been conducted to determine the current nature and extent of any contamination and to assess the resulting risk to human health and the environment. The feasibility study evaluates remedial action alternatives to identify any that are feasible for implementation and that would effectively reduce risk. Historical studies had indicated that current problems would likely include {sup 137}Cs in sediment of the Clinch River, mercury in sediment and fish of Poplar Creek and PCBs and pesticides in fish from throughout the OU. Peak releases of mercury and {sup 137}Cs occurred over 35 years ago, and current releases are low. Past releases of PCBs from the ORR are poorly quantified, and current releases are difficult to quantify because levels are so low. The site characterization focused on contaminants in surface water, sediment, and biota. Contaminants in surface water were all found to be below Ambient Water Quality Criteria. Other findings included the following: elevated metals including cesium 137 and mercury in McCoy Branch sediments; PCBs and chlordane elevated in several fish species, presenting the only major human health risk, significant ecological risks in Poplar Creek but not in the Clinch River.« less

Remedial investigation/feasibility study for the Clinch River/Poplar Creek operable unit. Volume 4. Appendix F

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1995-09-01

This section contains ecotoxicological profiles for the COPECs for the combined Remedial Investigation/Feasibility Study Report for the Clinch River/Poplar Crack (CR/PC) Operable Unit (OU). The ecotoxicological information is presented for only those endpoints for which the chemicals are COPECs. The CR/PC OU is located in Anderson and Roane Counties, Tennessee and consists of the Clinch River and several of its embayments in Melton Hill and Watts Bar Reservoirs. These waters have received hazardous substances released over a period of 50 years from the US Department of Energy`s Oak Ridge Reservation (ORR), a National Priority List site established under the Comprehensivemore » Environmental Response, Compensation, and Liability Act. A remedial investigation has been conducted to determine the current nature and extent of any contamination and to assess the resulting risk to human health and the environment. The feasibility study evaluates remedial action alternatives to identify any that are feasible for implementation and that would effectively reduce risk. Historical studies had indicated that current problems would likely include {sup 137}Cs in sediment of the Clinch River, mercury in sediment and fish of Poplar Creek and PCBs and pesticides in fish from throughout the OU. Peak releases of mercury and {sup 137}Cs occurred over 35 years ago, and current releases are low. Past releases of PCBs from the ORR are poorly quantified, and current releases are difficult to quantify because levels are so low. The site characterization focused on contaminants in surface water, sediment, and biota. Contaminants in surface water were all found to be below Ambient Water Quality Criteria. Other findings included the following: elevated metals including cesium 137 and mercury in McCoy Branch sediments; PCBs and chlordane elevated in several fish species, presenting the only major human health risk, significant ecological risks in Poplar Creek but not in the Clinch River.« less

Leaf ontogeny dominates the seasonal exchange of volatile organic compounds (VOC) in a SRC-poplar plantation during an entire growing season

NASA Astrophysics Data System (ADS)

Brilli, Federico; Gioli, Beniamino; Fares, Silvano; Zenone, Terenzio; Zona, Donatella; Gielen, Bert; Loreto, Francesco; Janssens, Ivan; Ceulemans, Reinhart

2015-04-01

The declining cost of many renewable energy technologies and changes in the prices of fossil fuels have recently encouraged governments policies to subsidize the use of biomass as a sustainable source of energy. Deciduous poplars (Populus spp.) trees are often selected for biomass production in short rotation coppiced (SRC) for their high CO2 photosynthetic assimilation rates and their capacity to develop dense canopies with high values of leaf area index (LAI). So far, observations and projections of seasonal variations of many VOC fluxes has been limited to strong isoprenoids emitting evergreen ecosystems such tropical and Mediterranean forests as well as Citrus and oil palm plantation, all having constant values of LAI. We run a long-term field campaign where the exchange of VOC, together with CO2 and water vapor was monitored during an entire growing season (June - November, 2012) above a SRC-based poplar plantation. Our results confirmed that isoprene and methanol were the most abundant fluxes emitted, accounting for more than 90% of the total carbon released in form of VOC. However, Northern climates characterized by fresh summertime temperatures and recurring precipitations favored poplar growth while inhibiting the development of isoprene emission that resulted in only 0.7% of the net ecosystem carbon exchange (NEE). Besides, measurements of a multitude of VOC fluxes by PTR-TOF-MS showed bi-directional exchange of oxygenated-VOC (OVOC) such as: formaldehyde, acetaldehyde, acetone, isoprene oxidation products (iox, namely MVK, MAC and MEK) as well as ethanol and formic acid. The application of Self Organizing Maps to visualize the relationship between the full time-series of many VOC fluxes and the observed seasonal variations of environmental, physiological and structural parameters proved the most abundant isoprene ad methanol fluxes to occur mainly on the hottest days under mid-high light intensities when also NEE and evapotraspiration reached the highest rates. However, the seasonal pattern of methanol emission was also highly correlated with high VPD and NEE, whereas the highest isoprene emissions were mostly associated with the highest values of LAI. During the hottest and sunniest days we observed iox production triggered by photochemical reactions and deposition to the canopies. Nevertheless, peaks in formaldehyde deposition did not match with those of iox and isoprene emission. The emission of other OVOC species was mainly related to low values of LAI, most likely as a result of leaf senescence. We have compared the observed time-series of isoprene and methanol fluxes with the simulated seasonal patterns obtained from the canopy-scale model of emissions of gases and aerosols from nature (MEGAN). The model accuracy increased when a dynamic function to predict seasonal changes in the basal emission factor was applied. However, the simulated cumulative carbon emitted in form of isoprene underestimated the observed amount by 30% on a seasonal basis, whereas good agreement was found between observed and prediceted methanol emissions. Current research is aimed at improving process-based models that account for the ontogeny of leaves in order to predict the impact of VOC emitted from deciduous SRC-poplar plantations on air chemistry and quality.

Overexpression of AtAP1M3 regulates flowering time and floral development in Arabidopsis and effects key flowering-related genes in poplar.

PubMed

Chen, Zhong; Ye, Meixia; Su, Xiaoxing; Liao, Weihua; Ma, Huandi; Gao, Kai; Lei, Bingqi; An, Xinmin

2015-08-01

APETALA1 plays a crucial role in the transition from vegetative to reproductive phase and in floral development. In this study, to determine the effect of AP1 expression on flowering time and floral organ development, transgenic Arabidopsis and poplar overexpressing of AtAP1M3 (Arabidopsis AP1 mutant by dominant negative mutation) were generated. Transgenic Arabidopsis with e35Spro::AtAP1M3 displayed phenotypes with delayed-flowering compared to wild-type and flowers with abnormal sepals, petals and stamens. In addition, transgenic Arabidopsis plants exhibited reduced growth vigor compared to the wild-type plants. Ectopic expression of AtAP1M3 in poplar resulted in up- or down-regulation of some endogenous key flowering-related genes, including floral meristems identity gene LFY, B-class floral organ identity genes AP3 and PI, flowering pathway integrator FT1 and flower repressors TFL1 and SVP. These results suggest that AtAP1M3 regulates flowering time and floral development in plants.

Differential effects of fine root morphology on water dynamics in the root-soil interface

NASA Astrophysics Data System (ADS)

DeCarlo, K. F.; Bilheux, H.; Warren, J.

2017-12-01

Soil water uptake form plants, particularly in the rhizosphere, is a poorly understood question in the plant and soil sciences. Our study analyzed the role of belowground plant morphology on soil structural and water dynamics of 5 different plant species (juniper, grape, maize, poplar, maple), grown in sandy soils. Of these, the poplar system was extended to capture drying dynamics. Neutron radiography was used to characterize in-situ dynamics of the soil-water-plant system. A joint map of root morphology and soil moisture was created for the plant systems using digital image processing, where soil pixels were connected to associated root structures via minimum distance transforms. Results show interspecies emergent behavior - a sigmoidal relationship was observed between root diameter and bulk/rhizosphere soil water content difference. Extending this as a proxy for extent of rhizosphere development with root age, we observed a logistic growth pattern for the rhizosphere: minimal development in the early stages is superceded by rapid onset of rhizosphere formation, which then stabilizes/decays with the likely root suberization. Dynamics analysis of water content differences between the root/rhizosphere, and rhizosphere/bulk soil interface highlight the persistently higher water content in the root at all water content and root size ranges. At the rhizosphere/bulk soil interface, we observe a shift in soil water dynamics by root size: in super fine roots, we observe that water content is primarily lower in the rhizosphere under wetter conditions, which then gradually increases to a relatively higher water content under drier conditions. This shifts to a persistently higher rhizosphere water content relative to bulk soil in both wet/dry conditions with increased root size, suggesting that, by size, the finest root structures may contribute the most to total soil water uptake in plants.

Hybrid poplar on two anthracite coal-mine spoils: 10-year results

Treesearch

Miroslaw M. Czapowskyj

1978-01-01

Unrooted dormant cuttings of 28 hybrid poplar clones were planted on two graded anthracite coal-mine spoils derived from sandstone or from glacial till. Ten-year results show that the plantation survived very well (82 percent), but that growth was extremely varied. Spoil Characteristics and performance of individual clones are presented.

Hybrid poplar cultivars for maximizing phytomass production on gold mine tailings in the Black Hills

Treesearch

Ardell J. Bjugstad

1987-01-01

Twenty-six hybrid poplar clones were planted as cuttings on a gold mine tailings in the Black Hills. Four exhibited very good survival and growth. Other clones had relatively high (exceeding 50 percent) survival but slow growth (below 60 cm) over a 5-year period.

Planting yellow-poplar, white ash, black cherry, and black locust

Treesearch

Robert D. Williams; Calvin F. Bey

1989-01-01

Hardwood plantations that include yellow-poplar, white ash, black cherry, and black locust can be established on upland sites in the central hardwoods region (see Note 3.06 Seeding and Planting Upland Oaks, and Note 3.08 Seeding and Planting Walnut). Even though hardwoods are more difficult to establish than conifers, there are...

Upgrading Yellow-Poplar Seeds

Treesearch

F. T. Bonner; G. L. Switzer

1971-01-01

Yellow-poplar seed lots can be upgraded considerably by dewinging in a debearder and then cleaning and separating the seeds into four specific-gravity fractions with a fractionating aspirator or a gravity separator. By this process, lots with an original soundness of 6 to 10 percent were upgraded to between 60 and 65 percent full seeds.

Using hierarchical clustering of secreted protein families to classify and rank candidate effectors of rust fungi

USDA-ARS?s Scientific Manuscript database

Rust fungi are obligate biotrophic pathogens causing considerable damage on crop plants. P. graminis f. sp. tritici, the causal agent of wheat stem rust, and M. larici-populina, the poplar rust pathogen, have strong deleterious impact on wheat and poplar wood production, respectively. The recently r...

Response of the Imported Willow Leaf Beetle to Bacillus thuringiensis var. san diego on Poplar Willow1

Treesearch

Leah S. Bauer

1992-01-01

The imported willow leaf beetle, Plagiodera versicolora (Laicharting) (Coleoptera: Chrysomelidae), a multivoltine defoliator of willow and poplar (Salicaceae), is considered a significant pest throughout eastern North America (W.T. Johnson and H.H Lyon, "Insects that Feed on Trees and Shrubs," Cornell University Press, Ithaca, 1988)....

Large-scale hybrid poplar production economics: 1995 Alexandria, Minnesota establishment cost and management

DOE Office of Scientific and Technical Information (OSTI.GOV)

Downing, M.; Langseth, D.; Stoffel, R.

1996-12-31

The purpose of this project was to track and monitor costs of planting, maintaining, and monitoring large scale commercial plantings of hybrid poplar in Minnesota. These costs assists potential growers and purchasers of this resource to determine the ways in which supply and demand may be secured through developing markets.

Establishment and early growth of Populus hybrids irrigated with landfill leachate

Treesearch

Ronald S., Jr. Zalesny; Adam H. Wiese; Edmund O. Bauer; Jill A. Zalesny

2007-01-01

Hybrid poplar genotypes exhibit great potential for tree establishment and growth when irrigated with municipal solid waste landfill leachate. We evaluated the potential for establishment on leachate-irrigated soils by testing: 1) aboveground growth of hybrid poplar during repeated irrigation with landfill leachate and 2) aboveground and belowground biomass after 70 d...

Biology and natural enemies of Agrilus fleischeri (Coleoptera:Buprestidae), a newly emerging destructive buprestid pest in Northeast China

USDA-ARS?s Scientific Manuscript database

The jewel beetle Agrilus fleischeri Obenberger (Coleoptera: Buprestidae) is a newly emerging major pest of poplar trees (Populus spp.) in northeast China and is responsible for the poplar mortality throughout its distribution range. In order to determine how to manage this pest effectively, we stud...

Planting Yellow-Poplar--Where We Stand Today

Treesearch

T.E. Russell

1977-01-01

Yellow-poplar can be established on a wide variety of sites with bare-rooted seedlings and standard planting techniques. Many past plantings have performed poorly because substandard seedlings have been planted on unsuitable sites and competing vegetation has not been adequately controlled. Research over the past two decades, however, provides workable guides for site...

Potential Utilization of Sweetgum for Structural Lumber

Treesearch

Timothy D. Faust; Robert H. McAlister; Peter J. Stewart; Frederick W. Cubbage; Philip A. Araman

1991-01-01

The forest resource base in the Southeast is rapidly changing. Dwindling reserves of high quality pine sawlogs will provide incentive to utilize low-density hardwoods such as yellow-poplar and sweetgum for structural lumber. Inventories of sweetgum (Liquidambar styraciflua, L.) and yellow-poplar (Liriodendron tulipifera, L.) are currently high and growth is exceeding...

Growth and Yield of Thinned Yellow-Poplar

Treesearch

Donald E. Beck; Lino Della-Bianca

1972-01-01

Diameter distributions and yields for various combinations of site index, age, and density for unthinned and largely undisturbed stands of yellow-poplar (Liriodendron tulipifera L. ) have been presented by McGee and Della-Bianca (1967) and Beck and Della-Bianca (1970). Their results were based on the initial measurements of a network of permanent sample plots...

Silvicultural systems for harvesting mixed hardwood stands

Treesearch

H. Clay Smith; Ivan L. Sander

1989-01-01

Mixed stands that include oaks, yellow-poplar, black cherry, maples, white ash, basswood, birches, American beech, and other species are commonly found in the central hardwood forest. Depending on site quality and past stand treatment, overstory composition may range from nearly pure stands of oak or yellow-poplar to mixtures of 20 or more species.

Hybrid Poplar Plantations Outgrow Deer Browsing Effects

Treesearch

Daniel A. Netzer

1984-01-01

Good plantation establishment techniques along with fast growing clones result in minimal deer damage to hybrid poplar plantations. Although deer prefer certain clones, as food becomes scarce they eventually browse all clones. With proper establishment trees grow to or beyond the reach of browsing deer in the first year and well beyond in the second. Poorly...

Using a combined hydrolysis factor to optimize high titer ethanol production from sulfite-pretreated poplar without detoxification

Treesearch

Jingzhi Zhang; Feng Gu; J.Y. Zhu; Ronald S. Zalesny Jr.

2015-01-01

Sulfite pretreatment to overcome the recalcitrance of lignocelluloses (SPORL) was applied to poplar NE222 chips in a range of chemical loadings, temperatures, and times. The combined hydrolysis factor (CHF) as a pretreatment severity accurately predicted xylan dissolution by SPORL. Good correlations between CHF and pretreated...

Choosing tree genotypes for phytoremediation of landfill leachate using phyto-recurrent selection

Treesearch

Jill A. Zalesny; Ronald S., Jr. Zalesny; Adam H. Wiese; Richard B. Hall

2007-01-01

Information about the response of poplar (Populus spp.) genotypes to landfill leachate irrigation is needed, along with efficient methods for choosing genotypes based on leachate composition. Poplar clones were irrigated during three cycles of phyto-recurrent selection to test whether genotypes responded differently to leachate and water, and to test...

Effect of ammate on unwanted growth in oak--yellow-poplar stands in New Jersey

Treesearch

S. Little; H. A. Somes

1954-01-01

Stands of mixed oaks and yellow-poplar form the most valuable forest crop on many sites in central and northern New Jersey and in the Delaware Valley of southern New Jersey. However, these stands often contain shrubs and low-value hardwood trees that prevent satisfactory restocking of cutover areas.

Determination of As in tree-rings of poplar (Populus alba L.) by U-shaped DC arc.

PubMed

Marković, D M; Novović, I; Vilotić, D; Ignjatović, Lj

2009-04-01

An argon-stabilized U-shaped DC arc with a system for aerosol introduction was used for determination of As in poplar (Populus alba L.) tree-rings. After optimization of the operating parameters and selection of the most appropriate signal integration time (30 s), the limit of detection for As was reduced to 15.0 ng/mL. This detection limit obtained with the optimal integration time was compared with those for other methods: inductively coupled plasma-atomic emission spectrometry (ICP-AES), direct coupled plasma-atomic emission spectrometry (DCP-AES), microwave induced plasma-atomic emission spectrometry (MIP-AES) and improved thermospray flame furnace atomic absorption spectrometry (TS-FF-AAS). Arsenic is toxic trace element which can adversely affect plant, animal and human health. As an indicator of environment pollution we collected poplar tree-rings from two locations. The first area was close to the "Nikola Tesla" (TENT-A) power plant, Obrenovac, while the other was in the urban area of Novi Sad. In all cases elevated average concentrations of As were registered in poplar tree-rings from the Obrenovac location.

Bioconversion of hybrid poplar to ethanol and co-products using an organosolv fractionation process: optimization of process yields.

PubMed

Pan, Xuejun; Gilkes, Neil; Kadla, John; Pye, Kendall; Saka, Shiro; Gregg, David; Ehara, Katsunobu; Xie, Dan; Lam, Dexter; Saddler, Jack

2006-08-05

An organosolv process involving extraction with hot aqueous ethanol has been evaluated for bioconversion of hybrid poplar to ethanol. The process resulted in fractionation of poplar chips into a cellulose-rich solids fraction, an ethanol organosolv lignin (EOL) fraction, and a water-soluble fraction containing hemicellulosic sugars, sugar breakdown products, degraded lignin, and other components. The influence of four independent process variables (temperature, time, catalyst dose, and ethanol concentration) on product yields was analyzed over a broad range using a small composite design and response surface methodology. Center point conditions for the composite design (180 degrees C, 60 min, 1.25% H(2)SO(4), and 60% ethanol), yielded a solids fraction containing approximately 88% of the cellulose present in the untreated poplar. Approximately 82% of the total cellulose in the untreated poplar was recovered as monomeric glucose after hydrolysis of the solids fraction for 24 h using a low enzyme loading (20 filter paper units of cellulase/g cellulose); approximately 85% was recovered after 48 h hydrolysis. Total recovery of xylose (soluble and insoluble) was equivalent to approximately 72% of the xylose present in untreated wood. Approximately 74% of the lignin in untreated wood was recovered as EOL. Other cooking conditions resulted in either similar or inferior product yields although the distribution of components between the various fractions differed markedly. Data analysis generated regression models that describe process responses for any combination of the four variables. (c) 2006 Wiley Periodicals, Inc.

Precocious flowering in trees: the FLOWERING LOCUS T gene as a research and breeding tool in Populus.

PubMed

Zhang, Huanling; Harry, David E; Ma, Cathleen; Yuceer, Cetin; Hsu, Chuan-Yu; Vikram, Vikas; Shevchenko, Olga; Etherington, Elizabeth; Strauss, Steven H

2010-06-01

Expression of FLOWERING LOCUS T (FT) and its homologues has been shown to accelerate the onset of flowering in a number of plant species, including poplar (Populus spp.). The application of FT should be of particular use in forest trees, as it could greatly accelerate and enable new kinds of breeding and research. Recent evidence showing the extent to which FT is effective in promoting flowering in trees is discussed, and its effectiveness in poplar is reported. Results using one FT gene from Arabidopsis and two from poplar, all driven by a heat-inducible promoter, transformed into two poplar genotypes are also described. Substantial variation in flowering response was observed depending on the FT gene and genetic background. Heat-induced plants shorter than 30 cm failed to flower as well as taller plants. Plants exposed to daily heat treatments lasting 3 weeks tended to produce fewer abnormal flowers than those in heat treatments of shorter durations; increasing the inductive temperature from 37 degrees C to 40 degrees C produced similar benefits. Using optimal induction conditions, approximately 90% of transgenic plants could be induced to flower. When induced FT rootstocks were grafted with scions that lacked FT, flowering was only observed in rootstocks. The results suggest that a considerable amount of species- or genotype-specific adaptation will be required to develop FT into a reliable means for shortening the generation cycle for breeding in poplar.

Dark respiration and carbohydrate status of two forest species grown in elevated carbon dioxide. [Liriodendron tulipifera L. ; Quercus alba L

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wullschleger, S.D.; Norby, R.J.; Hendrix, D.L.

1991-05-01

Carbon assimilation is often increased by CO{sub 2} enrichment, but the response of dark respiration and carbohydrate metabolism to elevated CO{sub 2} is less well documented. The authors examined the diurnal response of these two processes in yellow-poplar (Liriodendron tulipifera L.) and white oak (Quercus alba L.) seedling exposed to CO{sub 2} enrichment under field conditions. One-year-old seedlings of yellow-poplar and white oak were grown in open-top chambers and exposed to ambient, +150 {mu}mol mol{sup {minus}1}, or +300 {mu}mol mol{sup {minus}1} CO{sub 2} concentrations. After 24 weeks, mature leaves of yellow-poplar and white oak seedlings grown at high CO{sub 2}more » showed a 37% and 52% reduction in nighttime respiration, respectively. Morning starch levels for yellow-poplar and white oak grown at +300 {mu}mol mol{sup {minus}1} increased 72% and 40%, respectively, compared to ambient-grown plants. Yellow-poplar and white oak seedlings grown at high CO{sub 2} contained 17% and 27% less morning sucrose, respectively than did plants grown at ambient CO{sub 2} concentration. Starch accumulation and the subsequent depletion of sucrose for plants grown under CO{sub 2} enrichment, resulted in a pronounced rise in the starch/sucrose ratio with increasing CO{sub 2} concentration. The diurnal pattern of dark respiration suggested that a relationship with carbohydrate status might exist.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Noh, Seol Ah, E-mail: s6022029@korea.ac.kr; Choi, Young-Im, E-mail: yichoi99@forest.go.kr; Cho, Jin-Seong, E-mail: jinsung3932@gmail.com

Brassinosteroids (BRs) play important roles in many aspects of plant growth and development, including regulation of vascular cambium activities and cell elongation. BR-induced BEE3 (brassinosteroid enhanced expression 3) is required for a proper BR response. Here, we identified a poplar (Populus alba × Populus glandulosa) BEE3-like gene, PagBEE3L, encoding a putative basic helix-loop-helix (bHLH)-type transcription factor. Expression of PagBEE3L was induced by brassinolide (BL). Transcripts of PagBEE3L were mainly detected in stems, with the internode having a low level of transcription and the node having a relatively higher level. The function of the PagBEE3L gene was investigated through phenotypic analyses with PagBEE3L-overexpressingmore » (ox) transgenic lines. This work particularly focused on a potential role of PagBEE3L in stem growth and development of polar. The PagBEE3L-ox poplar showed thicker and longer stems than wild-type plants. The xylem cells from the stems of PagBEE3L-ox plants revealed remarkably enhanced proliferation, resulting in an earlier thickening growth than wild-type plants. Therefore, this work suggests that xylem development of poplar is accelerated in PagBEE3L-ox plants and PagBEE3L plays a role in stem growth by increasing the proliferation of xylem cells to promote the initial thickening growth of poplar stems. - Highlights: • We identify the BEE3-like gene form hybrid poplar (Populus alba × Populus glandulosa). • We examine effects of overexpression of PagBEE3L on growth in poplar. • We found that 35S:BEE3L transgenic plants showed more rapid growth than wild-type plants. • BEE3L protein plays an important role in the development of plant stem.« less

Down-regulation of gibberellic acid in poplar has negligible effects on host-plant suitability and insect pest response

DOE Office of Scientific and Technical Information (OSTI.GOV)

Buhl, Christine; Strauss, Steven H.; Lindroth, Richard L.

Abstract Endogenous levels and signaling of gibberellin plant hormones such as gibberellic acid (GA) have been genetically down-regulated to create semi-dwarf varieties of poplar. The potential benefits of semi-dwarf stature include reduced risk of wind damage, improved stress tolerance, and improved wood quality. Despite these benefits, modification of growth traits may have consequences for non-target traits that confer defense against insect herbivores. According to the growth-differentiation balance hypothesis, reductions in growth may shift allocation of carbon from growth to chemical resistance traits, thereby altering plant defense. To date, host-plant suitability and pest response have not been comprehensively evaluated in GAmore » down-regulated plants. We quantified chemical resistance and nitrogen (an index of protein) in GA down-regulated and wild-type poplar (Populus alba × P. tremula) genotypes. We also evaluated performance of both generalist (Lymantria dispar) and specialist (Chrysomela scripta) insect pests reared on these genotypes. Our evaluation of resistance traits in four GA down-regulated genotypes revealed increased phenolic glycosides in one modified genotype and reduced lignin in two modified genotypes relative to the non-transgenic wild type. Nitrogen levels did not vary significantly among the experimental genotypes. Generalists reared on the four GA down-regulated genotypes exhibited reduced performance on only one modified genotype relative to the wild type. Specialists, however, performed similarly across all genotypes. Results from this study indicate that although some non-target traits varied among GA down-regulated genotypes, the differences in poplar pest susceptibility were modest and highly genotype-specific.« less

Down-regulation of gibberellic acid in poplar has negligible effects on host-plant suitability and insect pest response

DOE PAGES

Buhl, Christine; Strauss, Steven H.; Lindroth, Richard L.

2015-01-06

Abstract Endogenous levels and signaling of gibberellin plant hormones such as gibberellic acid (GA) have been genetically down-regulated to create semi-dwarf varieties of poplar. The potential benefits of semi-dwarf stature include reduced risk of wind damage, improved stress tolerance, and improved wood quality. Despite these benefits, modification of growth traits may have consequences for non-target traits that confer defense against insect herbivores. According to the growth-differentiation balance hypothesis, reductions in growth may shift allocation of carbon from growth to chemical resistance traits, thereby altering plant defense. To date, host-plant suitability and pest response have not been comprehensively evaluated in GAmore » down-regulated plants. We quantified chemical resistance and nitrogen (an index of protein) in GA down-regulated and wild-type poplar (Populus alba × P. tremula) genotypes. We also evaluated performance of both generalist (Lymantria dispar) and specialist (Chrysomela scripta) insect pests reared on these genotypes. Our evaluation of resistance traits in four GA down-regulated genotypes revealed increased phenolic glycosides in one modified genotype and reduced lignin in two modified genotypes relative to the non-transgenic wild type. Nitrogen levels did not vary significantly among the experimental genotypes. Generalists reared on the four GA down-regulated genotypes exhibited reduced performance on only one modified genotype relative to the wild type. Specialists, however, performed similarly across all genotypes. Results from this study indicate that although some non-target traits varied among GA down-regulated genotypes, the differences in poplar pest susceptibility were modest and highly genotype-specific.« less

Growth and physiological responses of isohydric and anisohydric poplars to drought

DOE PAGES

Attia, Ziv; Domec, Jean-Christophe; Oren, Ram; ...

2015-05-07

Understanding how different plants prioritize carbon gain and drought vulnerability under a variable water supply is important for predicting which trees will maximize woody biomass production under different environmental conditions. Here, Populus balsamifera (BS, isohydric genotype), P. simonii (SI, previously uncharacterized stomatal behaviour), and their cross, P. balsamifera x simonii (BSxSI, anisohydric genotype) were studied to assess the physiological basis for biomass accumulation and water-use efficiency across a range of water availabilities. Under ample water, whole plant stomatal conductance (g s), transpiration (E), and growth rates were higher in anisohydric genotypes (SI and BSxSI) than in isohydric poplars (BS). Undermore » drought, all genotypes regulated the leaf to stem water potential gradient via changes in gs, synchronizing leaf hydraulic conductance (K leaf) and E: isohydric plants reduced K leaf, g s, and E, whereas anisohydric genotypes maintained high K leaf and E, which reduced both leaf and stem water potentials. Nevertheless, SI poplars reduced their plant hydraulic conductance (K plant) during water stress and, unlike, BSxSI plants, recovered rapidly from drought. Low gs of the isohydric BS under drought reduced CO 2 assimilation rates and biomass potential under moderate water stress. While anisohydric genotypes had the fastest growth under ample water and higher photosynthetic rates under increasing water stress, isohydric poplars had higher water-use efficiency. Overall, the results indicate three strategies for how closely related biomass species deal with water stress: survival-isohydric (BS), sensitive-anisohydric (BSxSI), and resilience-anisohydric (SI). Lastly, we discuss implications for woody biomass growth, water-use efficiency, and survival under variable environmental conditions.« less

Surface sterilization of hybrid poplar cuttings

Treesearch

Alma M. Waterman

1954-01-01

Fungus diseases of hybrid poplars may be spread by spores that lodge in the resinous coating of buds of dormant cuttings, and in the lenticels. Surface sterilization by dipping the cuttings in fungicides was tested to determine whether such treatment would prevent the germination of spores of the canker-producing fungi Septoria musiva and Dothichiza populea and the...

Durability of yellow-poplar and sweetgum and service life of finishes after long-term exposure

Treesearch

R. Sam Williams; William C. Feist

2004-01-01

This report describes the results of long-term outdoor exposure on durability of hardwood plywood and the service life of various finishes. Smooth (abrasive-planed) and rough (saw-textured) yellow-poplar (Liriodendron tulipifera L.) and sweetgum (Liquidambar styraciflua L.) plywood panelswere exposed outdoors for 16 years near Madison, Wisconsin. The performance of...

A Growth and Yield Model for Thinned Stands of Yellow-Poplar

Treesearch

Bruce R. Knoebel; Harold E. Burkhart; Donald E. Beck

1986-01-01

Simultaneous growth and yield equations were developed for predicting basal area growth and cubic-foot volume growth and yield in thinned stands of yellow-poplar. A joint loss function involving both volume and basal area was used to estimate the coefficients in the system of equations. The estimates obtained were analytically compatible, invariant for projection...

Yellow-poplar seed quality varies by seed trees, stands, and years

Treesearch

G.A. Limstrom

1959-01-01

The number of year-old yellow-poplar (Liriodendron tulipifera L.) seedlings grown from equal quantities of seed varies as much among individual seed trees within a stand as among stands of different geographic location. Moreover, production will vary from one year to another. This information was obtained from an experiment begun in the Central...

Nutrient composition of blades, petioles, and whole leaves from fertilized and unfertilized yellow-poplar

Treesearch

L. R. Auchmoody

1974-01-01

Nitrogen (N) and phosphorus (P) concentrations in leaf blades and petioles obtained from three fertilized and three unfertilized yellow-poplar sample trees were determined annually during a 4-year period. Concentrations were substantially higher in blades than in petioles. Fertilization increased N and P concentrations in blades, but petioles showed only a slight...

Putrescine overproduction does not affect the catabolism of spermidine and spermine in poplar and Arabidopsis

Treesearch

Lin Shao; Pratiksha Bhatnagar; Rajtilak Majumdar; Rakesh Minocha; Subhash C. Minocha

2014-01-01

The effect of up-regulation of putrescine (Put) production by genetic manipulation on the turnover of spermidine (Spd) and spermine (Spm) was investigated in transgenic cells of poplar (Populus nigra x maximowiczii) and seedlings of Arabidopsis thaliana. Several-fold increase in Put production was achieved by expressing a mouse...

Leafing-out date not indicative of growth rate in hybrid poplars

Treesearch

Harold F. Ford; Edward I. Sucoff

1961-01-01

In breeding trees for rapid growth, testing the progeny usually requires many years. To shorten the testing period, geneticists have tried to find characteristics in juvenile trees that would indicate mature-tree performance. With hybrid poplars (Populus spp.), work at the Northeastern Forest Experiment Station has shown that the thickness of bark on...

Energy partitioning and surface resistance of a poplar plantation in northern China

Treesearch

M. Kang; Z. Zhang; A. Noormets; X. Fang; T. Zha; J. Zhou; G. Sun; S. G. McNulty; J. Chen

2015-01-01

Poplar (Populus sp.) plantations have been, on the one hand, broadly used in northern China for urban greening, combating desertification, as well as for paper and wood production. On the other hand, such plantations have been questioned occasionally for their possible negative impacts on water availability due to the higher water-use nature of...

Maturation and Collection of Yellow-Poplar Seeds in the Midsouth

Treesearch

F. T. Bonner

1976-01-01

Yellow-poplar fruits are best collected in late October when their color changes from green to yellow-green or yellow. There were no other obvious physical or chemical changes indicating maturity. The seeds are physiologically mature as early as September 1, although high fruit moisture contents make special handling necessary if fruits are collected at this time....

Grade Distribution and Drying Degrade of Sweetgum and Yellow-poplar Structural Lumber

Treesearch

Timothy D. Faust

1990-01-01

The fact that the supply of southern pine timber is changing to include more lower quality plantation stock may provide incentive for utilizing lower density hardwoods for structural lumber. Yellow-poplar and sweetgum are potential substitutes for southern pine. A major problem in utilizing soft hardwoods for structural lumber is the difficulties associated with drying...

Genetic manipulation of the metabolism of polyamines in poplar cells. The regulation of putrescine catabolism

Treesearch

Pratiksha Bhatnagar; Rakesh Minocha; Subhash C. Minocha

2002-01-01

We investigated the catabolism of putrescine (Put) in a non-transgenic (NT) and a transgenic cell line of poplar (Populus nigra x maximowiczii) expressing a mouse (Mus musculus) ornithine (Orn) decarboxylase (odc) cDNA. The transgenic cells produce 3- to 4-fold higher amounts of Put than the NT...

Putrescine overproduction negatively impacts the oxidative state of poplar cells in culture

Treesearch

Sridev Mohapatra; Rakesh Minocha; Stephanie Long

2009-01-01

While polyamines (PAs) have been suggested to protect cells against Reactive Oxygen Species (ROS), their catabolism is known to generate ROS. We compared the activities of several enzymes and cellular metabolites involved in the ROS scavenging pathways in two isogenic cell lines of poplar (Populus nigra × maximowiczii) differing in their PA...

Accumulation and Distribution of Dry Matter and Nutrients in Aigeiros Poplar Plantations

Treesearch

G. L. Switzer; L. E. Nelson; James B. Baker

1976-01-01

Patterns of accumulation of dry matter and nutrients through 20 years in Aigeiros poplar plantations are strongly influenced by mode of plantation culture. Accumulation of both dry matter and nutrients in closely spaced thinned plantations is linear through age 12 to 14, after which accumulation declines and then stabilizes. In contrast, dry matter and nutrient...

Somaclonal variation in hybrid poplars for resistance to Septoria leaf spot

Treesearch

M.E. Ostry; D. D. Skilling

1987-01-01

Tissue culture techniques have been used to obtain hybrid poplars with putative resistance to leaf spot caused by Septoria musiva from clones previously susceptible to the disease. Stem internode explants were used to obtain proliferating callus cultures. Adventitious bud formation and shoot proliferation were then induced. Elongated shoots were excised and rooted in a...

Some effects of competition on the survival of yellow-poplar seedlings

Treesearch

J. J. Phillips

1962-01-01

In the upper Coastal Plain and northward in New Jersey, yellow-poplar is an important component of the hardwood forests because of its rapid growth, straight and clear bole, and desirable wood characteristics. But attempts to reproduce this species naturally after harvest cuttings have often been unsuccessful. Though poor seed crops and unfavorable seedbed conditions...

Strength and Stiffness Properties of Sweetgum and Yellow-poplar Structural Lumber

Treesearch

Timothy D. Faust; Robert H. McAlister; Stanley J. Zarnoch

1990-01-01

The forest resource base in the Southeast is rapidly changing. Dwindling reserves of high quality pine sawlogs will provide incentives to utilize low-density hardwoods such as yellow-poplar and sweetgum for structural lumber. Inventories of sweetgum (Liriodendron tulipifera L.) are currently high and growth is exceeding removals. The mechanical propertiees of dimension...

Effects of irrigating poplar energy crops with landfill leachate on soil micro- and meso-fauna

Treesearch

Jill A. Zalesny; David R. Coyle; Ronald S. Jr. Zalesny; Adam H. Wiese

2009-01-01

Increased municipal solid waste generated worldwide combined with substantial demand for renewable energy has prompted testing and deployment of woody feedstock production systems that reuse and recycle wastewaters as irrigation and fertilization for the trees. Populus species and hybrids (i.e., poplars) are ideal for such systems given their fast...

Feeding Preference of Penned Whitetailed Deer for Hybrid Poplar Clones

Treesearch

Richard L. Verch

1979-01-01

Five hybrid poplar clones were presented to 16 penned white-tailed deer on a feeding board over a 3-day period in September, 1978. A definite order of preference was observed over a 3-hour period fore each of 3 trials. Over a longer period (8-24 hours), all 5 clones were completely consumed.

Practical breeding of cottonwood in the north-central region

Treesearch

Carl A. Mohn

1973-01-01

More than 20 years ago Scott Pauley (1949) designated the genus Populus as the "guinea pig of forest-tree breeding. This designation is still appropriate as evidenced by the steady, almost overwhelming, stream of publications related to the genetics and breeding of poplars. A good indication of the scope and depth of genetic work with poplars...

An economic and energy analysis of poplar intensive cultures in the Lake States.

Treesearch

Dietmar Rose; Karen Ferguson; David C. Lothner; J. Zavitkovski

1981-01-01

Short- (5 to 10 years) and long- (15 years) rotation, irrigated and nonirrigated intensive cultures of hybrid poplar were analyzed economically via cash flow analysis. Energy balances we also calculated for each alternative. Nonirrigated systems offer reasonable economic returns whereas irrigated systems do not. All systems produce more energy than they use as...

Bud-grafting yellow-poplar

Treesearch

David T. Funk

1963-01-01

Several years ago we began work on the vegetative propagation of yellow-poplar (Liriodendron tulipifera L.) with the aim of eventually establishing a clonal seed orchard. We tried field grafting, field budding, and air layering. We then attempted rooting cuttings in the greenhouse and in an indoor propagation bench. The best we could do with any of these methods was 4...

Biomass of Yellow-Poplar in Natural Stands in Western North Carolina

Treesearch

Alexander Clark; James G. Schroeder

1977-01-01

Aboveground biomass was determined for yellow-poplar(Liriodendron tulipifera L.) trees 6 to 28 inches d. b. h. growingin natural, uneven-aged mountaincovestandsin western North Carolina.Specific gravity, moisture content, and green weight per cubic foot are presented for the total tree and its components. Tables developed from regression equations show weight and...

Dynamics of planted cherrybark oak seedlings and yellow-poplar from seed following a regeneration clearcut

Treesearch

Wayne K. Clatterbuck

2011-01-01

A bottomland loblolly pine (Pinus taeda) stand originating from an early 1940s planting on a minor stream bottom of the Coastal Plain in west Tennessee was harvested in 1992 and allowed to regenerate to hardwoods. Although the pines had been planted, a few naturally regenerated yellow-poplar (Liriodendron tulipifera) and sweetgum...

Conditions Affecting Lingzhi or Reishi Medicinal Mushroom Ganoderma lucidum (Agaricomycetes) Basidiome Quality, Morphogenesis, and Biodegradation of Wood By-products in Argentina.

PubMed

Kuhar, Francisco; Postemsky, Pablo Daniel; Bianchinotti, Maria Virginia

2018-01-01

Solid-state fermentation (SSF) with the medicinal higher Basidiomycete Ganoderma lucidum was studied as a strategy to use pine (Pinus radiata D. Don) and poplar (Populus nigra L.) wood chips and sawdust. Fruiting bodies were produced and the value of the biotransformed substrate was assessed. The highest mushroom yield (63 g dry weight per kilogram of dry substrate) was obtained with poplar sawdust and wood chips. Immersion of the bioreactors was a simple watering method that obtained suitable yields. Two morphological types were induced using 2 different incandescent light intensities. High light irradiation induced the highest valued mushroom morphology (as a whole product). Time course study of substrate biodegradation and mycelial growth dynamics indicated that the trophophase lasted 20 days and presented laccase activity of 0.01-0.03 units · g-1. The activity at idiophase was 10 times higher. Aqueous and alkali extracts, as well as carbohydrase enzyme profile activity, revealed differences in the properties of the residual substrate; some related to the substrate source are considered to be of concern for further use of this pretreated biomass. In view of the results obtained, we propose use of SSF of pine and poplar with G. lucidum to profitably recycle softwood by-products from the timber industry.

Genome-wide analysis of day/night DNA methylation differences in Populus nigra.

PubMed

Ding, Chang-Jun; Liang, Li-Xiong; Diao, Shu; Su, Xiao-Hua; Zhang, Bing-Yu

2018-01-01

DNA methylation is an important mechanism of epigenetic modification. Methylation changes during stress responses and developmental processes have been well studied; however, their role in plant adaptation to the day/night cycle is poorly understood. In this study, we detected global methylation patterns in leaves of the black poplar Populus nigra 'N46' at 8:00 and 24:00 by methylated DNA immunoprecipitation sequencing (MeDIP-seq). We found 10,027 and 10,242 genes to be methylated in the 8:00 and 24:00 samples, respectively. The methylated genes appeared to be involved in multiple biological processes, molecular functions, and cellular components, suggesting important roles for DNA methylation in poplar cells. Comparing the 8:00 and 24:00 samples, only 440 differentially methylated regions (DMRs) overlapped with genic regions, including 193 hyper- and 247 hypo-methylated DMRs, and may influence the expression of 137 downstream genes. Most hyper-methylated genes were associated with transferase activity, kinase activity, and phosphotransferase activity, whereas most hypo-methylated genes were associated with protein binding, ATP binding, and adenyl ribonucleotide binding, suggesting that different biological processes were activated during the day and night. Our results indicated that methylated genes were prevalent in the poplar genome, but that only a few of these participated in diurnal gene expression regulation.

Functional Characterization of the Poplar R2R3-MYB Transcription Factor PtoMYB216 Involved in the Regulation of Lignin Biosynthesis during Wood Formation

PubMed Central

Lu, Wanxiang; Yang, Li; Jiang, Yuanzhong; Luo, Keming

2013-01-01

Because of the importance of wood in many industrial applications, tremendous studies have been performed on wood formation, especially in lignin biosynthesis. MYB transcription factors (TFs), which consist of a large family of plant TFs, have been reported to directly regulate lignin biosynthetic genes in a number of plants. In this study, we describe the cloning and functional characterization of PtoMYB216, a cDNA isolated from Chinese white poplar (Populus tomentosa Carr.). PtoMYB216 encodes a protein belonging to the R2R3-MYB family and displays significant similarity with other MYB factors shown to regulate lignin synthesis in Arabidopsis. Gene expression profiling studies showed that PtoMYB216 mRNA is specifically expressed during secondary wall formation in wood. The 1.8-kb promoter sequence of PtoMYB216 was fused to the GUS coding sequence and introduced into wild-type A. thaliana. GUS expression was shown to be restricted to tissues undergoing secondary cell wall formation. Overexpression of PtoMYB216 specifically activated the expression of the upstream genes in the lignin biosynthetic pathway and resulted in ectopic deposition of lignin in cells that are normally unligninified. These results suggest that PtoMYB216 is specific transcriptional activators of lignin biosynthesis and involved in the regulation of wood formation in poplar. PMID:24204619

C2H2 type of zinc finger transcription factors in foxtail millet define response to abiotic stresses.

PubMed

Muthamilarasan, Mehanathan; Bonthala, Venkata Suresh; Mishra, Awdhesh Kumar; Khandelwal, Rohit; Khan, Yusuf; Roy, Riti; Prasad, Manoj

2014-09-01

C2H2 type of zinc finger transcription factors (TFs) play crucial roles in plant stress response and hormone signal transduction. Hence considering its importance, genome-wide investigation and characterization of C2H2 zinc finger proteins were performed in Arabidopsis, rice and poplar but no such study was conducted in foxtail millet which is a C4 Panicoid model crop well known for its abiotic stress tolerance. The present study identified 124 C2H2-type zinc finger TFs in foxtail millet (SiC2H2) and physically mapped them onto the genome. The gene duplication analysis revealed that SiC2H2s primarily expanded in the genome through tandem duplication. The phylogenetic tree classified these TFs into five groups (I-V). Further, miRNAs targeting SiC2H2 transcripts in foxtail millet were identified. Heat map demonstrated differential and tissue-specific expression patterns of these SiC2H2 genes. Comparative physical mapping between foxtail millet SiC2H2 genes and its orthologs of sorghum, maize and rice revealed the evolutionary relationships of C2H2 type of zinc finger TFs. The duplication and divergence data provided novel insight into the evolutionary aspects of these TFs in foxtail millet and related grass species. Expression profiling of candidate SiC2H2 genes in response to salinity, dehydration and cold stress showed differential expression pattern of these genes at different time points of stresses.

Enhanced Degradation of TCE on a Superfund Site Using Endophyte-Assisted Poplar Tree Phytoremediation.

PubMed

Doty, Sharon L; Freeman, John L; Cohu, Christopher M; Burken, Joel G; Firrincieli, Andrea; Simon, Andrew; Khan, Zareen; Isebrands, J G; Lukas, Joseph; Blaylock, Michael J

2017-09-05

Trichloroethylene (TCE) is a widespread environmental pollutant common in groundwater plumes associated with industrial manufacturing areas. We had previously isolated and characterized a natural bacterial endophyte, Enterobacter sp. strain PDN3, of poplar trees, that rapidly metabolizes TCE, releasing chloride ion. We now report findings from a successful three-year field trial of endophyte-assisted phytoremediation on the Middlefield-Ellis-Whisman Superfund Study Area TCE plume in the Silicon Valley of California. The inoculated poplar trees exhibited increased growth and reduced TCE phytotoxic effects with a 32% increase in trunk diameter compared to mock-inoculated control poplar trees. The inoculated trees excreted 50% more chloride ion into the rhizosphere, indicative of increased TCE metabolism in planta. Data from tree core analysis of the tree tissues provided further supporting evidence of the enhanced rate of degradation of the chlorinated solvents in the inoculated trees. Test well groundwater analyses demonstrated a marked decrease in concentration of TCE and its derivatives from the tree-associated groundwater plume. The concentration of TCE decreased from 300 μg/L upstream of the planted area to less than 5 μg/L downstream of the planted area. TCE derivatives were similarly removed with cis-1,2-dichloroethene decreasing from 160 μg/L to less than 5 μg/L and trans-1,2-dichloroethene decreasing from 3.1 μg/L to less than 0.5 μg/L downstream of the planted trees. 1,1-dichloroethene and vinyl chloride both decreased from 6.8 and 0.77 μg/L, respectively, to below the reporting limit of 0.5 μg/L providing strong evidence of the ability of the endophytic inoculated trees to effectively remove TCE from affected groundwater. The combination of native pollutant-degrading endophytic bacteria and fast-growing poplar tree systems offers a readily deployable, cost-effective approach for the degradation of TCE, and may help mitigate potential transfer up the food chain, volatilization to the atmosphere, as well as direct phytotoxic impacts to plants used in this type of phytoremediation.

Sexual Dimorphism Floral MicroRNA Profiling and Target Gene Expression in Andromonoecious Poplar (Populus tomentosa)

PubMed Central

Song, Yuepeng; Ma, Kaifeng; Ci, Dong; Zhang, Zhiyi; Zhang, Deqiang

2013-01-01

Although the molecular basis of poplar sex-specific flower development remains largely unknown, increasing evidence indicates an essential role for microRNAs (miRNAs). The specific miRNA types and precise miRNA expression patterns in dioecious plant flower development remain unclear. Here, we used andromonoecious poplar, an exceptional model system, to eliminate the confounding effects of genetic background of dioecious plants. This system, combined with high-throughput sequencing and computational analysis, allowed us to characterize sex-specific miRNAomes from female and male flowers. Comparative miRNAome analysis combined with quantitative real-time PCR revealed the expression patterns of 27 miRNAs in poplar flower and showed that the targets of these miRNAs are involved in flower organogenesis, Ca2+ transport, phytohormone synthesis and metabolism, and DNA methylation. This paper describes a complex regulatory network consisting of these miRNAs expressed in sex-specific flower development in a dioecious plant. The conserved and novel miRNA locations were annotated in the Populus trichocarpa genome. Among these, miRNA Pto-F70 and 4 targets are located in the sex-determination regions of chromosome XIX. Furthermore, two novel miRNAs, Pto-F47 and Pto-F68, were shown for the first time to be regulatory factors in phytohormone interactions. To our knowledge, this report is the first systematic investigation of sex-specific flower-related miRNAs and their targets in poplar, and it deepens our understanding of the important regulatory functions of miRNAs in female and male flower development in this dioecious plant. PMID:23667507

The MYB182 Protein Down-Regulates Proanthocyanidin and Anthocyanin Biosynthesis in Poplar by Repressing Both Structural and Regulatory Flavonoid Genes1[OPEN

PubMed Central

Yoshida, Kazuko; Ma, Dawei; Constabel, C. Peter

2015-01-01

Trees in the genus Populus (poplar) contain phenolic secondary metabolites including the proanthocyanidins (PAs), which help to adapt these widespread trees to diverse environments. The transcriptional activation of PA biosynthesis in response to herbivory and ultraviolet light stress has been documented in poplar leaves, and a regulator of this process, the R2R3-MYB transcription factor MYB134, has been identified. MYB134-overexpressing transgenic plants show a strong high-PA phenotype. Analysis of these transgenic plants suggested the involvement of additional MYB transcription factors, including repressor-like MYB factors. Here, MYB182, a subgroup 4 MYB factor, was found to act as a negative regulator of the flavonoid pathway. Overexpression of MYB182 in hairy root culture and whole poplar plants led to reduced PA and anthocyanin levels as well as a reduction in the expression of key flavonoid genes. Similarly, a reduced accumulation of transcripts of a MYB PA activator and a basic helix-loop-helix cofactor was observed in MYB182-overexpressing hairy roots. Transient promoter activation assays in poplar cell culture demonstrated that MYB182 can disrupt transcriptional activation by MYB134 and that the basic helix-loop-helix-binding motif of MYB182 was essential for repression. Microarray analysis of transgenic plants demonstrated that down-regulated targets of MYB182 also include shikimate pathway genes. This work shows that MYB182 plays an important role in the fine-tuning of MYB134-mediated flavonoid metabolism. PMID:25624398

Exploring accessibility of pretreated poplar cell walls by measuring dynamics of fluorescent probes.

PubMed

Paës, Gabriel; Habrant, Anouck; Ossemond, Jordane; Chabbert, Brigitte

2017-01-01

The lignocellulosic cell wall network is resistant to enzymatic degradation due to the complex chemical and structural features. Pretreatments are thus commonly used to overcome natural recalcitrance of lignocellulose. Characterization of their impact on architecture requires combinatory approaches. However, the accessibility of the lignocellulosic cell walls still needs further insights to provide relevant information. Poplar specimens were pretreated using different conditions. Chemical, spectral, microscopic and immunolabeling analysis revealed that poplar cell walls were more altered by sodium chlorite-acetic acid and hydrothermal pretreatments but weakly modified by soaking in aqueous ammonium. In order to evaluate the accessibility of the pretreated poplar samples, two fluorescent probes (rhodamine B-isothiocyanate-dextrans of 20 and 70 kDa) were selected, and their mobility was measured by using the fluorescence recovery after photobleaching (FRAP) technique in a full factorial experiment. The mobility of the probes was dependent on the pretreatment type, the cell wall localization (secondary cell wall and cell corner middle lamella) and the probe size. Overall, combinatory analysis of pretreated poplar samples showed that even the partial removal of hemicellulose contributed to facilitate the accessibility to the fluorescent probes. On the contrary, nearly complete removal of lignin was detrimental to accessibility due to the possible cellulose-hemicellulose collapse. Evaluation of plant cell wall accessibility through FRAP measurement brings further insights into the impact of physicochemical pretreatments on lignocellulosic samples in combination with chemical and histochemical analysis. This technique thus represents a relevant approach to better understand the effect of pretreatments on lignocellulose architecture, while considering different limitations as non-specific interactions and enzyme efficiency.

Nutrient Distribution Indicated Whole-Tree Harvesting as a Possible Factor Restricting the Sustainable Productivity of a Poplar Plantation System in China

PubMed Central

Ge, Xiaomin; Tian, Ye; Tang, Luozhong

2015-01-01

We evaluated the biomass and contents of five major macronutrients (N, P, K, Ca and Mg) in 10-year-old poplar trees (Populus deltoids Bartr. cv. “Lux”), and determined their nutrient use efficiencies (NUEs) at Zhoushan Forestry Farm (32°20′ N, 119°40′ E), Jiangsu province, in eastern China. The above- and below-ground biomass of poplar trees was 161.7 t ha-1, of which 53.3% was stemwood. The nutrient contents in the aboveground part were as follows: 415.1 kg N ha-1, 29.7 kg P ha-1, 352.0 kg K ha-1, 1083.0 kg Ca ha-1, and 89.8 kg Mg ha-1. The highest nutrient contents were in stembark, followed by branches, roots, stemwood, and foliage. The NUEs of the aboveground parts of poplar for N, P, K, Ca and Mg were 0.313, 4.377, 0.369, 0.120, 1.448 t dry biomass kg-1 nutrient, respectively, while those of stemwood were 1.294, 33.154, 1.253, 0.667, and 3.328 t dry biomass kg-1, respectively. The cycling coefficients, defined as the percentage of annual nutrient return in annual nutrient uptake, of N, P, K, Ca and Mg for the aboveground part were 87, 95, 69, 92, and 84%, respectively. Based on the NUE and nutrient cycling characteristics, shifting from whole-tree harvesting to stemwood-only harvesting and appropriately extending the harvest rotation could prevent site deterioration and support sustainable productivity of poplar plantation systems. PMID:25992549

Modelling impacts of second generation bioenergy production on Ecosystem Services in Europe

NASA Astrophysics Data System (ADS)

Henner, Dagmar; Smith, Pete; Davies, Christian; McNamara, Niall

2016-04-01

Bioenergy crops are an important source of renewable energy and are a possible mechanism to mitigate global climate warming, by replacing fossil fuel energy with higher greenhouse gas emissions. There is, however, uncertainty about the impacts of the growth of bioenergy crops on ecosystem services. This uncertainty is further enhanced by the unpredictable climate change currently going on. The goal of this project is to develop a comprehensive model that covers high impact, policy relevant ecosystem services at a Continental scale including biodiversity and pollination, water and air security, erosion control and soil security, GHG emissions, soil C and cultural services like tourism value. The technical distribution potential and likely yield of second generation energy crops, such as Miscanthus, Short Rotation Coppice (SRC) with willow, poplar, eucalyptus and other broadleaf species and Short Rotation Forestry (SRF), is currently being modelled using ECOSSE, DayCent, SalixFor and MiscanFor, and ecosystem models will be used to examine the impacts of these crops on ecosystem services. The project builds on models of energy crop production, biodiversity, soil impacts, greenhouse gas emissions and other ecosystem services, and on work undertaken in the UK on the ETI-funded ELUM project (www.elum.ac.uk). In addition, methods like water footprint tools, tourism value maps and ecosystem valuation tools and models (e.g. InVest, TEEB database, GREET LCA Model, World Business Council for Sustainable Development corporate ecosystem valuation, Millennium Ecosystem Assessment and the Ecosystem Services Framework) will be utilised. Research will focus on optimisation of land use change feedbacks on above named ecosystem services, impact on food security, land management practices and impacts from climate change. We will present results for GHG emissions and soil organic carbon change after different land use change scenarios (e.g. arable to Miscanthus, forest to SRF), and with different climate warming scenarios. Further, we will show modelled yield maps for Miscanthus, Salix and Poplar in Europe and will present constraint/opportunity maps for Europe based on yield modelled and other factors e.g. total economic value, technical potential, current land use, trade off and synergies, and so on. All this will be complemented by the presentation of a matrix including the factors and ecosystem services influenced by land use change to bioenergy crop production under different climate change scenarios.

Flood analyses for Department of Energy Y-12, ORNL and K-25 Plants. Flood analyses in support of flood emergency planning

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1995-05-01

The study involved defining the flood potential and local rainfall depth and duration data for the Department of Energy`s (DOE) Y-12, Oak Ridge National Laboratory (ORNL), and K-25 plants. All three plants are subject to flooding from the Clinch River. In addition, the Y-12 plant is subject to flooding from East Fork Poplar and Bear Creeks, the ORNL plant from Whiteoak Creek and Melton Branch, and the K-25 plant from Poplar Creek. Determination of flood levels included consideration of both rainfall events and postulated failures of Norris and Melton Hill Dams in seismic events.

Diseases of intensively cultured hybrid poplars: a summary of recent research in the north central region

Treesearch

M. E. Ostry; H. S. McNabb

1983-01-01

Several potentially damaging diseases of hybrid poplars hue been identified in the north-central United States. Among the most serious are leaf and stem diseases caused by Melampsora, Marssonina, and Septoria. Short-term chemical controls are of limited usefulness. The most practical control strategy appears to be the use of resistant clones obtained through local...

Estimating yellow-poplar growth and yield

Treesearch

Donald E. Beck

1989-01-01

Yellow-poplar grows in essentially pure, even-aged stands, so you can make growth and yield estimates from relatively few stand characteristics. The tables and models described here require only measures of stand age, stand basal area in trees 4.5 inches and larger, and site index. They were developed by remeasuring (at 5-year intervals over a 20-year period) many...

Geologic Variable Associated with Height of Yellow-Poplar Stand in the Bald Mountains of North Carolina

Treesearch

W. Henry McNab; Carl E. Merschat

1990-01-01

Quartz grain size and mylonitization, geologic variables determined fromrocks on sites, were associated with total height of yellow-poplar (Liriodendron tulipifera L.) standsand may be of value as independent variables in modeling tree growth from site characteristics. A predictive model containing quartz grain site and stand age accounted for about 54% of the...

Treatments needed to regenerate yellow-poplar in New Jersey and Maryland

Treesearch

S. Little

1967-01-01

In 17 areas, mostly in the Coastal Plain and Piedmont sections of New Jersey and Maryland, treatments were made to favor the establishment and growth of yellow-poplar reproduction. Results emphasize the importance of fairly large overstory openings (preferably 1 acre or more) and of reductions in understories by mistblowing, burning, or disking, but show that seedbed...

An approach for siting poplar energy production systems to increase productivity and associated ecosystem services

Treesearch

Ronald S. Zalesny; Deahn M. Donner; David R. Coyle; William L. Headlee

2012-01-01

Short rotation woody crops such as Populus spp. and their hybrids (i.e., poplars) are a significant component of the total biofuels and bioenergy feedstock resource in the USA. Production of these dedicated energy crops may result in large-scale land conversion, which leads to questions about their economic, logistic, and ecologic feasibility. To...

Growth of hybrid poplars, white spruce, and jack pine under various artificial lights.

Treesearch

Pamela S. Roberts; J. Zavitkovski

1981-01-01

Describes the energy consumption and biological effects of fluorescent, incandescent, and high pressure sodium lighting on the growth of poplars, white spruce, and jack pine in a greenhouse. At similar light levels the biological effects of all three light sources were similar. The incandescent lamps consumed several times more energy than the other two light...

Achievements in the utilzation of poplar wood : guideposts for the future : [abstract

Treesearch

John J. Balatinecz; Andre Leclercq; David E. Kretschmann

2000-01-01

Poplar wood is suitable and is utilized for a broad range of forest products worldwide. The utilization of any species is governed by a number of factors, such as basic wood properties, overall quality, quantity and price of the resource, available processing technologies, local as well as international market conditions for the products, and the availability and price...

Antisense down-regulation of 4CL expression alters lignification, tree growth, and saccharification potential of field-grown poplar

Treesearch

Steven L. Voelker; Barbara Lachenbruch; Frederick C. Meinzer; Michael Jourdes; Chanyoung Ki; Ann M. Patten; Laurence B. Davin; Norman G. Lewis; Gerald A. Tuskan; Lee Gunter; Stephen R. Decker; Michael J. Selig; Robert Sykes; Michael E. Himmel; Peter Kitin; Olga Shevchenko; Steven H. Strauss

2010-01-01

Transgenic down-regulation of the Pt4CL1 gene family encoding 4-coumarate:coenzyme A ligase (4CL) has been reported as a means for reducing lignin content in cell walls and increasing overall growth rates, thereby improving feedstock quality for paper and bioethanol production. Using hybrid poplar (Populus tremula...

West Virginia yellow-poplar lumber defect database

Treesearch

Lawrence E. Osborn; Charles J. Gatchell; Curt C. Hassler; Curt C. Hassler

1992-01-01

Describes the data collection methods and the format of the new West Virginia yellow-poplar lumber defect database that was developed for use with computer simulation programs. The database contains descriptions of 627 boards, totaling approximately 3,800 board. feet, collected in West Virginia in grades FAS, FASlF, No. 1 Common, No. 2A Common, and No. 2B Common. The...

Final report from VFL Technologies for the pilot-scale thermal treatment of Lower East Fork Poplar Creek floodplain soils. LEFPC appendices. Volume 5. Appendix V-D

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1994-09-01

This final report from VFL Technologies for the pilot-scale thermal treatment of lower East Fork Poplar Creek floodplain soils dated September 1994 contains LEFPC Appendices, Volume 5, Appendix V - D. This appendix includes the final verification run data package (PAH, TCLP herbicides, TCLP pesticides).

Summer is the best time to thin hybrid poplar plantations

Treesearch

Harold F. Ford; Albert G., Jr. Snow

1954-01-01

Hybrid poplar plantations are established by planting dormant cuttings in close spacing, usually 4 x 4 feet. They are cultivated during the first growing season to eliminate competition from grasses and weeds. After the first year, the more vigorous trees effectively shade out lower vegetation. But rapid tree growth often makes thinning necessary after 2 or 3 growing...

Comparison of yellow poplar growth models on the basis of derived growth analysis variables

Treesearch

Keith F. Jensen; Daniel A. Yaussy

1986-01-01

Quadratic and cubic polynomials, and Gompertz and Richards asymptotic models were fitted to yellow poplar growth data. These data included height, leaf area, leaf weight and new shoot height for 23 weeks. Seven growth analysis variables were estimated from each function. The Gompertz and Richards models fitted the data best and provided the most accurate derived...

Growth of Planted Yellow-Poplar After Vertical Mulching and Fertilization on Eroded Soils

Treesearch

J.B. Baker; B.G. Blackmon

1976-01-01

Fertilization and vertical mulching improved height growth of yellow-poplars planted on eroded soils. A growing demand for hardwood timber accompanied by a diminishing land base has prompted land managers to consider planting hardwoods on marginal sites such as the eroded soils in the Silty Uplands of Arkansas, Louisiana, and Mississippi. Many of these areas were well...

Expression of the poplar Flowering Locus T1 (FT1) gene reduces the generation time in plum (Prunus domestica L.)

USDA-ARS?s Scientific Manuscript database

Plums normally begin to flower and fruit three to seven years from seed. To shorten this generation time, early flowering plum genotypes were produced by transforming plum hypocotyls with the poplar (Populus trichocarpa) Flowering Locus T1 (PtFT1) gene. Ectopic expression of 35S::PtFT1 induced ear...

Evaluating hybrid poplar rooting. I. genotype x environment interactions in three contrasting sites

Treesearch

Ronald S., Jr. Zalesny; Don E. Riemenschneider; Richard B. Hall

2002-01-01

We need to learn more about environmental conditions that promote or hinder rooting of unrooted dormant hybrid poplar cuttings. Planting cuttings and recording survival after the growing season is not suitable to keep up with industrial demands for improved stock. This method does not provide information about specific genotype x environment interactions. We know very...

The bionomics of the cottonwood leaf beetle, Chrysomela scripta Fab., on tissue culture hybrid poplars

Treesearch

T.R. Burkot; D.M. Benjamin

1977-01-01

Tissue culture methods are applied to poplars of the Aigeiros group in attempts to overcome premature decline thought to be associated with viral infections. Hybrid selections from such cultures outplanted in 1975 at the F. G. Wilson Nursery in Boscobel, Wisconsin subsequently were severely infested by the Cottonwood Leaf Beetle, Chrysomela scripta Fab. Beetle...

Economic investigations of short rotation intensively cultured hybrid poplars

Treesearch

David C. Lothner

1983-01-01

The history of the economic analyses is summarized for short rotation intensively cultured hybrid poplar at the North Central Forest Experiment Station. Early break-even analyses with limited data indicated that at a price of $25-30 per dry ton for fiber and low to medium production costs, several systems looked profitable. Later cash flow analyses indicated that two...

Sprouting of thinned hybrid poplars on bituminous strip-mine spoils in Pennsylvania

Treesearch

Walter H. Davidson; Grant Davis

1972-01-01

Various thinning techniques were applied to 5-year old hybrid poplar stands on bituminous strip-mine spoils. Basal and stump sprays of 2, 4, 5-T in diesel oil were effective for killing the trees. There was no evidence that chemical treatments affected adjacent trees. Where trees were cut and stumps were not chemically treated, all clones sprouted prolifically....

Breeding poplars with durable resistance to Melampsora larici-populina leaf rust: a multidisciplinary approach to understand and delay pathogen adaptation

Treesearch

V. Jorge Dowkiw; M. Villar; E. Voisin; V. Guérin; P. Faivre-Rampant; A. Bresson; F. Bitton; S. Duplessis; P. Frey; B. Petre; C. Guinet; C. Xhaard; B. Fabre; F. Halkett; C. Plomion; C. Lalanne; C. Bastien

2012-01-01

During the last decades, European poplar breeders learned the hard way that Melampsora larici-populina (commonly abbreviated as Mlp…) has an impressive adaptive potential (McDonald and Linde 2002). This fungal pathogen defeated all the deployed cultivars carrying qualitative (i.e., complete) resistances inherited from the...

RNAi-mediated downregulation of poplar plasma membrane intrinsic proteins (PIPs) changes plasma membrane proteome composition and affects leaf physiology.

PubMed

Bi, Zhen; Merl-Pham, Juliane; Uehlein, Norbert; Zimmer, Ina; Mühlhans, Stefanie; Aichler, Michaela; Walch, Axel Karl; Kaldenhoff, Ralf; Palme, Klaus; Schnitzler, Jörg-Peter; Block, Katja

2015-10-14

Plasma membrane intrinsic proteins (PIPs) are one subfamily of aquaporins that mediate the transmembrane transport of water. To reveal their function in poplar, we generated transgenic poplar plants in which the translation of PIP genes was downregulated by RNA interference investigated these plants with a comprehensive leaf plasma membrane proteome and physiome analysis. First, inhibition of PIP synthesis strongly altered the leaf plasma membrane protein composition. Strikingly, several signaling components and transporters involved in the regulation of stomatal movement were differentially regulated in transgenic poplars. Furthermore, hormonal crosstalk related to abscisic acid, auxin and brassinosteroids was altered, in addition to cell wall biosynthesis/cutinization, the organization of cellular structures and membrane trafficking. A physiological analysis confirmed the proteomic results. The leaves had wider opened stomata and higher net CO2 assimilation and transpiration rates as well as greater mesophyll conductance for CO2 (gm) and leaf hydraulic conductance (Kleaf). Based on these results, we conclude that PIP proteins not only play essential roles in whole leaf water and CO2 flux but have important roles in the regulation of stomatal movement. Copyright © 2015. Published by Elsevier B.V.

Ecological genomics meets community-level modelling of biodiversity: mapping the genomic landscape of current and future environmental adaptation.

PubMed

Fitzpatrick, Matthew C; Keller, Stephen R

2015-01-01

Local adaptation is a central feature of most species occupying spatially heterogeneous environments, and may factor critically in responses to environmental change. However, most efforts to model the response of species to climate change ignore intraspecific variation due to local adaptation. Here, we present a new perspective on spatial modelling of organism-environment relationships that combines genomic data and community-level modelling to develop scenarios regarding the geographic distribution of genomic variation in response to environmental change. Rather than modelling species within communities, we use these techniques to model large numbers of loci across genomes. Using balsam poplar (Populus balsamifera) as a case study, we demonstrate how our framework can accommodate nonlinear responses of loci to environmental gradients. We identify a threshold response to temperature in the circadian clock gene GIGANTEA-5 (GI5), suggesting that this gene has experienced strong local adaptation to temperature. We also demonstrate how these methods can map ecological adaptation from genomic data, including the identification of predicted differences in the genetic composition of populations under current and future climates. Community-level modelling of genomic variation represents an important advance in landscape genomics and spatial modelling of biodiversity that moves beyond species-level assessments of climate change vulnerability. © 2014 John Wiley & Sons Ltd/CNRS.

Genetic manipulation of isoprene emissions in poplar plants remodels the chloroplast proteome.

PubMed

Velikova, Violeta; Ghirardo, Andrea; Vanzo, Elisa; Merl, Juliane; Hauck, Stefanie M; Schnitzler, Jörg-Peter

2014-04-04

Biogenic isoprene (2-methyl-1,3-butadiene) improves the integrity and functionality of thylakoid membranes and scavenges reactive oxygen species (ROS) in plant tissue under stress conditions. On the basis of available physiological studies, we hypothesized that the suppression of isoprene production in the poplar plant by genetic engineering would cause changes in the chloroplast protein pattern, which in turn would compensate for changes in chloroplast functionality and overall plant performance under abiotic stress. To test this hypothesis, we used a stable isotope-coded protein-labeling technique in conjunction with polyacrylamide gel electrophoresis and liquid chromatography tandem mass spectrometry. We analyzed quantitative and qualitative changes in the chloroplast proteome of isoprene-emitting and non isoprene-emitting poplars. Here we demonstrate that suppression of isoprene synthase by RNA interference resulted in decreased levels of chloroplast proteins involved in photosynthesis and increased levels of histones, ribosomal proteins, and proteins related to metabolism. Overall, our results show that the absence of isoprene triggers a rearrangement of the chloroplast protein profile to minimize the negative stress effects resulting from the absence of isoprene. The present data strongly support the idea that isoprene improves/stabilizes thylakoid membrane structure and interferes with the production of ROS.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tuskan, Gerald

Jerry Tuskan of Oak Ridge National Laboratory and the DOE JGI talks about poplar trees as models for selective adaptation to an environment. This video complements a study published ahead online August 24, 2014 in Nature Genetics.

Genome Enabled Discovery of Carbon Sequestration Genes in Poplar

DOE Office of Scientific and Technical Information (OSTI.GOV)

Filichkin, Sergei; Etherington, Elizabeth; Ma, Caiping

2007-02-22

The goals of the S.H. Strauss laboratory portion of 'Genome-enabled discovery of carbon sequestration genes in poplar' are (1) to explore the functions of candidate genes using Populus transformation by inserting genes provided by Oakridge National Laboratory (ORNL) and the University of Florida (UF) into poplar; (2) to expand the poplar transformation toolkit by developing transformation methods for important genotypes; and (3) to allow induced expression, and efficient gene suppression, in roots and other tissues. As part of the transformation improvement effort, OSU developed transformation protocols for Populus trichocarpa 'Nisqually-1' clone and an early flowering P. alba clone, 6K10. Completemore » descriptions of the transformation systems were published (Ma et. al. 2004, Meilan et. al 2004). Twenty-one 'Nisqually-1' and 622 6K10 transgenic plants were generated. To identify root predominant promoters, a set of three promoters were tested for their tissue-specific expression patterns in poplar and in Arabidopsis as a model system. A novel gene, ET304, was identified by analyzing a collection of poplar enhancer trap lines generated at OSU (Filichkin et. al 2006a, 2006b). Other promoters include the pGgMT1 root-predominant promoter from Casuarina glauca and the pAtPIN2 promoter from Arabidopsis root specific PIN2 gene. OSU tested two induction systems, alcohol- and estrogen-inducible, in multiple poplar transgenics. Ethanol proved to be the more efficient when tested in tissue culture and greenhouse conditions. Two estrogen-inducible systems were evaluated in transgenic Populus, neither of which functioned reliably in tissue culture conditions. GATEWAY-compatible plant binary vectors were designed to compare the silencing efficiency of homologous (direct) RNAi vs. heterologous (transitive) RNAi inverted repeats. A set of genes was targeted for post transcriptional silencing in the model Arabidopsis system; these include the floral meristem identity gene (APETALA1 or AP1), auxin response factor gene (ETTIN), the gene encoding transcriptional factor of WD40 family (TRANSPARENTTESTAGLABRA1 or TTG1), and the auxin efflux carrier (PIN-FORMED2 or PIN2) gene. More than 220 transgenic lines of the 1st, 2nd and 3rd generations were analyzed for RNAi suppression phenotypes (Filichkin et. al., manuscript submitted). A total of 108 constructs were supplied by ORNL, UF and OSU and used to generate over 1,881 PCR verified transgenic Populus and over 300 PCR verified transgenic Arabidopsis events. The Populus transgenics alone required Agrobacterium co-cultivations of 124.406 explants.« less

Effects of UV-B radiation on phenolic composition and deposition patterns and leaf physiology in three Eastern tree species

NASA Astrophysics Data System (ADS)

Sullivan, Joseph H.; Gitz, Dennis C.; Peek, Michael S.; McElrone, Andrew J.

2002-01-01

Quantitative changes in foliar chemistry in response to UVB radiation are frequently reported but less is known about the qualitative changes in putative UV-screening compounds. It has also not been conclusively shown whether qualitative differences in screening compounds or differences in localization patterns influences the sensitivity of plants to damage from UVB radiation. In this study we evaluated the chemical composition and deposition patterns of UV-absorbing compounds in three tree species and assayed these species for possible effects on gas exchange and photosynthetic carbon assimilation. Branches of mature trees of sweetgum (Liquidambar styraciflua), tulip poplar (Liriodendron tulipifera) and red maple (Acer rubrum) were exposed to supplemental levels of UVB radiation over three growing seasons. Controls for UVA were also measured by exposing branches to supplemental UVA only, and additional branches not irradiated were also used for controls. These species demonstrated contrasting chemical composition and deposition patterns with poplar being the most responsive in terms of epidermal accumulation of phenolics including flavonols and chlorogenic acid and hydroxycinnamates. Sweetgum and red maple showed increases primarily in hydroxycinnamates, particularly in the mesophyll in red maple. Leaf area was marginally influenced by UV exposure level. Assimilation was generally not reduced by UVB radiation in these species and was enhanced in red maple by both UVB and UVA and by UVA in sweetgum. These finding are consistent with a hypothesis that epidermal attenuation of UVB would only be reduced in poplar, which accumulated the additional epidermal screening compounds. It is possible that photosynthetic efficiency was enhanced in red maple by the increased absorption of blue light within the mesophyll. Stomatal conductance was generally reduced, and this led to an increase in water use efficiency in red maple and poplar.

Secondary successional trajectories of structural and catabolic bacterial communities in oil-polluted soil planted with hybrid poplar.

PubMed

Mukherjee, Shinjini; Sipilä, Timo; Pulkkinen, Pertti; Yrjälä, Kim

2015-02-01

Poplars have widely been used for rhizoremediation of a broad range of organic contaminants for the past two decades. Still, there is a knowledge gap regarding the rhizosphere-associated bacterial communities of poplars and their dynamics during the remediation process. It is envisaged that a detailed understanding of rhizosphere-associated microbial populations will greatly contribute to a better design and implementation of rhizoremediation. To investigate the long-term succession of structural and catabolic bacterial communities in oil-polluted soil planted with hybrid poplar, we carried out a 2-year field study. Hybrid aspen (Populus tremula × Populus tremuloides) seedlings were planted in polluted soil excavated from an accidental oil-spill site. Vegetated and un-vegetated soil samples were collected for microbial community analyses at seven different time points during the course of 2 years and sampling time points were chosen to cover the seasonal variation in the boreal climate zone. Bacterial community structure was accessed by means of 16S rRNA gene amplicon pyrosequencing, whereas catabolic diversity was monitored by pyrosequencing of alkane hydroxylase and extradiol dioxygenase genes. We observed a clear succession of bacterial communities on both structural and functional levels from early to late-phase communities. Sphingomonas type extradiol dioxygenases and alkane hydroxylase homologs of Rhodococcus clearly dominated the early-phase communities. The high-dominance/low-diversity functional gene communities underwent a transition to low-dominance/high-diversity communities in the late phase. These results pointed towards increased catabolic capacities and a change from specialist to generalist strategy of bacterial communities during the course of secondary succession. © 2014 John Wiley & Sons Ltd.

An auxin-induced β-type endo-1,4-β-glucanase in poplar is involved in cell expansion and lateral root formation.

PubMed

Yu, Liangliang; Li, Qiong; Zhu, Yingying; Afzal, Muhammad Saddique; Li, Laigeng

2018-05-01

PtrGH9A7, a poplar β-type endo-1,4-β-glucanase gene induced by auxin, promotes both plant growth and lateral root development by enhancing cell expansion. Endo-1,4-β-glucanase (EGase) family genes function in multiple aspects of plant growth and development. Our previous study found that PtrCel9A6, a poplar EGase gene of the β subfamily, is specifically expressed in xylem tissue and is involved in the cellulose biosynthesis required for secondary cell wall formation (Yu et al. in Mol Plant 6:1904-1917, 2013). To further explore the functions and regulatory mechanism of β-subfamily EGases, we cloned and characterized another poplar β-type EGase gene PtrGH9A7, a close homolog of PtrCel9A6. In contrast to PtrCel9A6, PtrGH9A7 is predominantly expressed in parenchyma tissues of the above-ground part; in roots, PtrGH9A7 expression is specifically restricted to lateral root primordia at all stages from initiation to emergence and is strongly induced by auxin application. Heterologous overexpression of PtrGH9A7 promotes plant growth by enhancing cell expansion, suggesting a conserved role for β-type EGases in 1,4-β-glucan chains remodeling, which is required for cell wall loosening. Moreover, the overexpression of PtrGH9A7 significantly increases lateral root number, which might result from improved lateral root primordium development due to enhanced cell expansion. Taken together, these results demonstrate that this β-type EGase induced by auxin signaling has a novel role in promoting lateral root formation as well as in enhancing plant growth.

Creation of a Genome-Wide Metabolic Pathway Database for Populus trichocarpa Using a New Approach for Reconstruction and Curation of Metabolic Pathways for Plants1[W][OA

PubMed Central

Zhang, Peifen; Dreher, Kate; Karthikeyan, A.; Chi, Anjo; Pujar, Anuradha; Caspi, Ron; Karp, Peter; Kirkup, Vanessa; Latendresse, Mario; Lee, Cynthia; Mueller, Lukas A.; Muller, Robert; Rhee, Seung Yon

2010-01-01

Metabolic networks reconstructed from sequenced genomes or transcriptomes can help visualize and analyze large-scale experimental data, predict metabolic phenotypes, discover enzymes, engineer metabolic pathways, and study metabolic pathway evolution. We developed a general approach for reconstructing metabolic pathway complements of plant genomes. Two new reference databases were created and added to the core of the infrastructure: a comprehensive, all-plant reference pathway database, PlantCyc, and a reference enzyme sequence database, RESD, for annotating metabolic functions of protein sequences. PlantCyc (version 3.0) includes 714 metabolic pathways and 2,619 reactions from over 300 species. RESD (version 1.0) contains 14,187 literature-supported enzyme sequences from across all kingdoms. We used RESD, PlantCyc, and MetaCyc (an all-species reference metabolic pathway database), in conjunction with the pathway prediction software Pathway Tools, to reconstruct a metabolic pathway database, PoplarCyc, from the recently sequenced genome of Populus trichocarpa. PoplarCyc (version 1.0) contains 321 pathways with 1,807 assigned enzymes. Comparing PoplarCyc (version 1.0) with AraCyc (version 6.0, Arabidopsis [Arabidopsis thaliana]) showed comparable numbers of pathways distributed across all domains of metabolism in both databases, except for a higher number of AraCyc pathways in secondary metabolism and a 1.5-fold increase in carbohydrate metabolic enzymes in PoplarCyc. Here, we introduce these new resources and demonstrate the feasibility of using them to identify candidate enzymes for specific pathways and to analyze metabolite profiling data through concrete examples. These resources can be searched by text or BLAST, browsed, and downloaded from our project Web site (http://plantcyc.org). PMID:20522724

Dynamics and Sources of Soil Organic C Following Afforestation of Croplands with Poplar in a Semi-Arid Region in Northeast China

PubMed Central

Hu, Ya-Lin; Hu, Li-Le; Zeng, De-Hui

2014-01-01

Afforestation of former croplands has been proposed as a promising way to mitigate rising atmospheric CO2 concentration in view of the commitment to the Kyoto Protocol. Central to this C sequestration is the dynamics of soil organic C (SOC) storage and stability with the development of afforested plantations. Our previous study showed that SOC storage was not changed after afforestation except for the 0–10 cm layer in a semi-arid region of Keerqin Sandy Lands, northeast China. In this study, soil organic C was further separated into light and heavy fractions using the density fractionation method, and their organic C concentration and 13C signature were analyzed to investigate the turnover of old vs. new SOC in the afforested soils. Surface layer (0–10 cm) soil samples were collected from 14 paired plots of poplar (Populus × xiaozhuanica W. Y. Hsu & Liang) plantations with different stand basal areas (the sum of the cross-sectional area of all live trees in a stand), ranging from 0.2 to 32.6 m2 ha−1, and reference maize (Zea mays L.) croplands at the same sites as our previous study. Soil ΔC stocks (ΔC refers to the difference in SOC content between a poplar plantation and the paired cropland) in bulk soil and light fraction were positively correlated with stand basal area (R 2 = 0.48, p<0.01 and R 2 = 0.40, p = 0.02, respectively), but not for the heavy fraction. SOCcrop (SOC derived from crops) contents in the light and heavy fractions in poplar plantations were significantly lower as compared with SOC contents in croplands, but tree-derived C in bulk soil, light and heavy fraction pools increased gradually with increasing stand basal area after afforestation. Our study indicated that cropland afforestation could sequester new C derived from trees into surface mineral soil, but did not enhance the stability of SOC due to a fast turnover of SOC in this semi-arid region. PMID:24466183

A Comparison of Four Techniques for Producing High-Grade Furniture Core Material From Low-Grade Yellow-Poplar

Treesearch

Philip A. Araman

1978-01-01

Four Methods of converting low-grade yellow-poplar lumber into high-grade furniture core material (lumber core) were compared. High-grade core material is used in tops, shelves, doors, and drawer fronts and only minor defects are allowed. Three gang-rip first and the conventional crosscut-first manufacturing sequences were evaluated in combination with 1 Common, 2A...

Effects of ozone and sulfur dioxide on height and stem specific gravity of Populus hybrids

Treesearch

Roy L. Patton

1981-01-01

Unfumigated hybrid poplars (Populus spp.) were compared with poplars of the same nine clones fumigated with 0.15 pprn ozone or 0.25 ppm sulfur dioxide. After 102 days, plant height and stem specific gravity were measured to determine whether specific gravity is altered by the fumigants and to compare that response to height suppression, an accepted...

Comparative growth of hybrid poplars and native northern black cottonwoods.

Treesearch

Roy R. Silen

1947-01-01

Beginning in the early 1920's, some fast-growing hybrid poplars were developed by the Oxford Paper Company in New England. In 1938 cuttings of the 25 best hybrids developed were sent to the Northwest for trial. These were planted on Lady Island near Camas, Washington, on lands of the Crown Zellerbach Corporation. During 1946 the eighth-year measurement was made of...

Evaluation of veneer yields and grades from yellow-poplar, white oak, and sweetgum from the southeast

Treesearch

Robert H. McAlister

1980-01-01

Dry volume yields and standard grades of veneer are given for yellow-poplar, sweetgum, and white oak by tree diameter and location within the stem. Results show that the typical stands of mixed southern pine and hardwood timer yield enough veneer to utilize almost 90 percent of the stand volume in the production of COM-PLY lumber and panels

Response to crop-tree release by 7-year-old stems of yellow-poplar and black cherry

Treesearch

G.R. Jr. Trimble; G.R. Jr. Trimble

1973-01-01

Five years after crop-tree release of yellow-poplar and black cherry sterns in a 7-year-old stand of Appalachian hardwoods, measurements indicated that released trees were but slightly superior to control trees in height, diameter, and crown position. Sprout regrowth of cut tree stems and grapevines had largely nullified the effects of release. Indications are that for...

Crop-tree release increases growth of 12-year-old yellow-poplar and black cherry

Treesearch

Neil I. Lamson; H. Clay Smith; H. Clay Smith

1989-01-01

Precommercial thinning was done in a 12-year-old Appalachian hardwood sapling stand in West Virginia. Two crop-tree release techniques were used--crown touching and crown touching plus 5 feet. Results indicated that both treatments significantly increased 5-year d.b.h. growth for released yellow-poplar and black cherry crop trees. Although there was a major increase in...

An Investigation of Crystalline Intensity of the Wood of Poplar Clones Grown in Jiangsu Province, China

Treesearch

Bernard R. Parresol; Fuliang Cao

1998-01-01

To establish manmade poplar (Populus spp.) clonal forests for industrial uses, two requirements must be met. First, forests must have high yield;and second, wood fibers must have specific mechanical properties. For example, both fiberboard and plywood require fibers with a certain stiffness and strength. In fact, fiber characteristics are closely related to the fiber?s...

Sulfur content of hybrid poplar cuttings fumigated with sulfur dioxide

Treesearch

Keith F. Jensen

1975-01-01

Hybrid poplar cuttings were fumigated with sulfur dioxide ranging in concentration from 0.1 to 5 ppm for periods of 5 to 80 hours. At the end of the fumigation periods, the cuttings were harvested and the sulfur and chlorophyll contents of the leaves were measured. At 0.1 ppm and 0.25 ppm the sulfur content initially increased, but decreased as fumigation continued. At...

Achievements in the utilization of poplarwood : guideposts for the future

Treesearch

John J. Balatinecz; David E. Kretschmann; Andre Leclercq

2001-01-01

From an early status as a “weed tree,” poplar has become an important commercial genus in North America during the past 20 years. The many and varied uses of poplar wood now include pulp and paper, lumber, veneer, plywood, composite panels, structural composite lumber, containers, pallets, furniture components, match splints and chopsticks.The high cellulose and...

Poplar plantation has the potential to alter the water balance in semiarid inner Mongolia

Treesearch

Burkhard Wilske; Long Wei; Shiping Chen; Tonggang Zha; Chenfeng Liu; Wenting Xu; Asko Noormets; Jianhui Haung; Yafen Wei; Jun Chen; Zhiqiang Zhang; Jian Ni; Ge Sun; Kirk Guo; Steve McNulty; Ranjeet John; Xiangguo Han; Guanghui Lin; Jiquan Chen

2009-01-01

Poplar plantation is the most dominant broadleaf forest type in northern China. Since the mid-1990s plantation was intensified to combat desertification along China’s northwestern border, i.e., within Inner Mongolia (IM). This evoked much concern regarding the ecological and environmental effects on areas that naturally grow grass or shrub vegetation. To highlight...

Growth and Development of Thinned Versus Unthinned Yellow-Poplar Sprout Clumps

Treesearch

Donald E. Beck

1977-01-01

Yellow-poplar stump sprouts are capable of very rapid growth and often dominate stands on good sites following harvest cutting. Thinning to one stem per stump at 6 years of age did not affect either height or diameter growth over the succeeding 18 years. The untreated clumps thinned themselves to an average of two stems per clump during the same time period. Thinning...

Specific gravity of hybrid poplars in the north-central region, USA: within-tree variability and site × genotype effects

Treesearch

William L. Headlee; Ronald S. Jr. Zalesny; Richard B. Hall; Edmund O. Bauer; Bradford Bender; Bruce A. Birr; Raymond O. Miller; Jesse A. Randall; Adam H. Wiese

2013-01-01

Specific gravity is an important consideration for traditional uses of hybrid poplars for pulp and solid wood products, as well as for biofuels and bioenergy production. While specific gravity has been shown to be under strong genetic control and subject to within-tree variability, the role of genotype × environment interactions is poorly understood. Most...

The use of short rotation willows and poplars for the recycling of saline waste waters

Treesearch

Jaconette Mirck; Ronald S. Jr. Zalesny; Ioannis Dimitriou; Jill A. Zalesny; Timothy A. Volk; Warren E. Mabee

2009-01-01

The production of high-salinity waste waters by landfills and other waste sites causes environmental concerns. This waste water often contains high concentrations of sodium and chloride, which may end up in local ground and surface waters. Vegetation filter systems comprised of willows and poplars can be used for the recycling of saline waste water. These vegetation...

Non-destructive digital imaging in poplar allows detailed analysis of adventitious rooting dynamics

Treesearch

R.J. Kodrzycki; R.B. Michaels; A.L. Friend; R.S. Zalesny; Ch.P. Mawata; D.W. McDonald

2008-01-01

The dynamics of root formation are difficult to observe directly over time without disturbing the rooting environment. A novel system for a non-destructive, non-invasive root analysis (RootViz FS, Phenotype Screening Corp.) was evaluated for its ability to analyze root formation from cuttings over a 32 day period in three poplar genotypes (DN70, P. Deltoides x...

Photographic guide of selected external defect indicators and associated internal defects in yellow-poplar

Treesearch

Everette D. Rast; John A. Beaton; David L. Sonderman

1991-01-01

To properly classify or grade logs or trees, one must be able to correctly identify defect indicators and assess the effect of the underlying defect on possible end products. This guide assists the individual in identifying the surface defect indicator and shows the progressive stages of the defect throughout its development for yellow-poplar. Twelve types of external...

Physiological responses of wild type and putrescine-overproducing transgenic cells of poplar to variations in the form and concentration of nitrogen in the medium

Treesearch

Rakesh Minocha; Jae Soon Lee; Stephanie Long; Pratiksha Bhatnagar; Subhash C. Minocha

2004-01-01

We determined: (a) the physiological consequences of overproduction of putrescine in transgenic poplar (Populus nigra x mnrimoviczir) cells expressing an omithine decarboxylase transgene; and (b) effects of variation in nitrogen (N) concentration of the medium on cellular polyamine concentration in transgenic and non-transgenic cells. Cells grown in...

The Poplar GT8E and GT8F Glycosyltransferases are Functional Orthologs of Arabidopsis PARVUS Involved in Gulcuronoxylan Biosynthesis

EPA Science Inventory

The poplar GT8E and GT8F glycosyltransferases have previously been shown to be associated with wood formation, but their roles in the biosynthesis of wood components are not known. Here, we show that PoGT8E and PoGT8F are expressed in vessels and fibers during wood formation and ...

Growth, yield, and disease resistance of 7- to 12-year-old poplar clones in the north central United States.

Treesearch

D.A. Netzer; D.N. Tolsted; M. E. Ostry; J. G. Isebrands; D.E. Riemenschneider; K.T. Ward

2002-01-01

Summarizes growth, yield, and disease resistance of 95 poplar clones at or near rotation age (culmination of mean annual increment). Plantations were established from 1986 to 1992 in Wisconsin, Minnesota, North and South Dakota. Clones DN164, DN177, DN154, NM2, NE264, DN170, and DN21 are recommended for further testing.

Second-year results of hybrid poplar test plantings on bituminous strip-mine spoils in Pennsylvania

Treesearch

Grant Davis

1964-01-01

During the period 1946-49, The Pennsylvania State University established 22 experimental plantings of trees and shrubs on strip-mine spoil banks in the Bituminous Region of Pennsylvania to determine which species were best suited for revegetating such sites. When 10-year growth on the experimental plots was evaluated, a clone of hybrid poplar was found to have outgrown...

Gramene database in 2010: updates and extensions.

PubMed

Youens-Clark, Ken; Buckler, Ed; Casstevens, Terry; Chen, Charles; Declerck, Genevieve; Derwent, Paul; Dharmawardhana, Palitha; Jaiswal, Pankaj; Kersey, Paul; Karthikeyan, A S; Lu, Jerry; McCouch, Susan R; Ren, Liya; Spooner, William; Stein, Joshua C; Thomason, Jim; Wei, Sharon; Ware, Doreen

2011-01-01

Now in its 10th year, the Gramene database (http://www.gramene.org) has grown from its primary focus on rice, the first fully-sequenced grass genome, to become a resource for major model and crop plants including Arabidopsis, Brachypodium, maize, sorghum, poplar and grape in addition to several species of rice. Gramene began with the addition of an Ensembl genome browser and has expanded in the last decade to become a robust resource for plant genomics hosting a wide array of data sets including quantitative trait loci (QTL), metabolic pathways, genetic diversity, genes, proteins, germplasm, literature, ontologies and a fully-structured markers and sequences database integrated with genome browsers and maps from various published studies (genetic, physical, bin, etc.). In addition, Gramene now hosts a variety of web services including a Distributed Annotation Server (DAS), BLAST and a public MySQL database. Twice a year, Gramene releases a major build of the database and makes interim releases to correct errors or to make important updates to software and/or data.

Comprehensive shear wave velocity study in the Popular Bluff Area, Southeast Missouri.

DOT National Transportation Integrated Search

2005-04-30

The University of Missouri-Rolla in collaboration with the Missouri Department of Transportation acquired : multiple geophysical, geotechnical and borehole data sets in the Poplar Bluff study area. The primary objective : was to evaluate the utility ...

Poplar potassium transporters capable of controlling K+ homeostasis and K+-dependent xylogenesis.

PubMed

Langer, Katharina; Ache, Peter; Geiger, Dietmar; Stinzing, Andrea; Arend, Matthias; Wind, Christa; Regan, Sharon; Fromm, Jörg; Hedrich, Rainer

2002-12-01

The cambial K+ content of poplar increases during the growth period in a K+ supply dependent manner. Upon K+ starvation or application of tetraethylammoniumchloride (TEA+), a K+ channel blocker, the average vessel lumen and expansion zone area were significantly reduced. In search for the molecular basis of potassium-dependent xylogenesis in poplar, K+ transporters homologous to those of known function in Arabidopis phloem- and xylem-physiology were isolated from a poplar wood EST library. The expression profile of three distinct K+ channel types and one K+ transporter, Populus tremula K+ uptake transporter 1 (PtKUP1), was analysed by quantitative RT-PCR. Thereby, we found P. tremula outward rectifying K+ channel (PTORK) and P. tremula K+ channel 2 (PTK2) correlated with the seasonal wood production. K+ transporter P. tremula 1 (KPT1) was predominantly found in guard cells. Following the heterologous expression in Xenopus oocytes the biophysical properties of the different channels were determined. PTORK, upon membrane de-polarization mediates potassium release. PTK2 is almost voltage independent, carrying inward K+ flux at hyperpolarized potential and K+ release upon de-polarization. PtKUP1 was expressed in a K+ uptake-deficient Escherichia coli strain, where this K+ transporter rescued K+-dependent growth. In order to link the different K+ transporters to the cambial activity and wood production, we compared the expression profiles to seasonal changes in the K+ content of the bark as well as xylem vessel diameter. Thereby, we found PTORK and PTK2 transcripts to follow the annual K+ variations in poplar branches. PtKUP1 was expressed at a low level throughout the year, suggesting a housekeeping function. From these data, we conclude that K+ channels are involved in the regulation of K+-dependent wood production.

Field-to-Fuel Performance Testing of Lignocellulosic Feedstocks for Fast Pyrolysis and Upgrading: Techno-economic Analysis and Greenhouse Gas Life Cycle Analysis

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meyer, Pimphan A.; Snowden-Swan, Lesley J.; Rappé, Kenneth G.

This work shows preliminary results from techno-economic analysis and life cycle greenhouse gas analysis of the conversion of seven (7) biomass feedstocks to produce liquid transportation fuels via fast pyrolysis and upgrading via hydrodeoxygenation. The biomass consists of five (5) pure feeds (pine, tulip poplar, hybrid poplar, switchgrass, corn stover) and two blends. Blend 1 consists of equal weights of pine, tulip poplar and switchgrass, and blend 2 is 67% pine and 33% hybrid poplar. Upgraded oil product yield is one of the most significant parameters affecting the process economics, and is a function of both fast pyrolysis oil yieldmore » and hydrotreating oil yield. Pure pine produced the highest overall yield, while switchgrass produced the lowest. Interestingly, herbaceous materials blended with woody biomass performed nearly as well as pure woody feedstock, suggesting a non-trivial relationship between feedstock attributes and production yield. Production costs are also highly dependent upon hydrotreating catalyst-related costs. The catalysts contribute an average of ~15% to the total fuel cost, which can be reduced through research and development focused on achieving performance at increased space velocity (e.g., reduced catalyst loading) and prolonging catalyst lifetime. Green-house-gas reduction does not necessarily align with favorable economics. From the greenhouse gas analysis, processing tulip poplar achieves the largest GHG emission reduction relative to petroleum (~70%) because of its lower hydrogen consumption in the upgrading stage that results in a lower natural gas requirement for hydrogen production. Conversely, processing blend 1 results in the smallest GHG emission reduction from petroleum (~58%) because of high natural gas demand for hydrogen production.« less

Laboratory evaluation of transgenic Populus davidiana×Populus bolleana expressing Cry1Ac + SCK, Cry1Ah3, and Cry9Aa3 genes against gypsy moth and fall webworm.

PubMed

Ding, Liping; Chen, Yajuan; Wei, Xiaoli; Ni, Mi; Zhang, Jiewei; Wang, Hongzhi; Zhu, Zhen; Wei, Jianhua

2017-01-01

Transgenic poplar lines 'Shanxin' (Populus davidiana×Populus bolleana) were generated via Agrobacterium-mediated transformation. The transgenic lines carried the expression cassettes of Cry1Ac + SCK, Cry1Ah3, and Cry9Aa3, respectively. The expression levels of the exogenous insect resistance genes in the transgenic lines were determined by Q-PCR and Western blot. Leaves of the transgenic lines were used for insect feeding bioassays on first instar larvae of the gypsy moth (Lymantria dispar) and fall webworm (Hyphantria cunea). At 5 d of feeding, the mean mortalities of larvae feeding on Cry1Ac + SCK and Cry1Ah3 transgenic poplars leaves were 97% and 91%, while mortality on Cry9Aa3 transgenic lines was about 49%. All gypsy moth and fall webworm larvae were killed in 7-9 days after feeding on leaves from Cry1Ac + SCK or Cry1Ah3 transgenic poplars, while all the fall webworm larvae were killed in 11 days and about 80% of gypsy moth larvae were dead in 14 days after feeding on those from Cry9Aa3 transgenic lines. It was concluded that the transgenic lines of Cry1Ac + SCK and Cry1Ah3 were highly toxic to larvae of both insect species while lines with Cry9Aa3 had lower toxicity,and H. cunea larvae are more sensitive to the insecticidal proteins compared to L. dispar. Transgenic poplar lines toxic to L. dispar and H. cunea could be used to provide Lepidoptera pest resistance to selected strains of poplar trees.

Boron accumulation and tolerance of hybrid poplars grown on a B-laden mixed paper mill waste landfill.

PubMed

Rees, Rainer; Robinson, Brett H; Rog, Christopher J; Papritz, Andreas; Schulin, Rainer

2013-03-01

Paper mill wastes are a mixture of by-products from pulp production and on-site energy production, consisting of paper mill sludge, ash and cinders. Landfilling of these highly boron (B) and heavy metal laden waste products carries environmental risks. Poplars have been successfully employed in the phytomanagement and hydraulic control of B contaminated sites. Here, we assess the performance of hybrid poplars on a paper-mill waste landfill, investigate the accumulation of B by the trees and explore the relationship between local-scale root growth and substrate properties. Leaf and root tissue samples were collected on three plots and analyzed for their chemical properties and root traits. Additionally, we sampled four soil cores in the vicinity of each of the trees and determined chemical and physical properties. Using a principal component analysis followed by a cluster analysis, we identified three substrate types. This method delineated the soil effects on tree survival and growth, although correlations with individual soil element concentrations were weak. Despite signs of B toxicity in some leaves, B was not the key limiting factor for poplar growth. Instead, Ca deficiency caused by a Mg:Ca imbalance was the primary reason for the poor performance of some trees. Root growth was not limited by toxicity effects of soil contaminants. Our results show that hybrid poplars perform well under the harsh growing conditions on a multi-contaminated, B-laden substrate in a hemiboreal climate. Exploiting the differences in the performance of the four clones in relation to the soil types, could increase the success of revegetation on this and other landfills. Copyright © 2012 Elsevier B.V. All rights reserved.

Hydrologic Evaluation of a Humid Climate Poplar Phytoremediation Barrier

NASA Astrophysics Data System (ADS)

Swensen, K.; Rabideau, A. J.

2016-12-01

The emplacement of hybrid poplar trees to function as phytoremediation barriers is an appealing and sustainable groundwater management strategy because of low maintenance costs and the potential to extract large amounts of groundwater without pumping. While the effectiveness of poplar barriers has been assessed by groundwater quality monitoring, less attention has been given to physical hydrologic evaluations needed to improve barrier designs. In this research, a five year hydrologic evaluation was conducted at a poplar phytoremediation site in western NY, with the goal of quantifying ETg (evapotranspiration from groundwater) as a measure of the barrier's effectiveness in a humid climate. To consider transpiration from both vadose zone and groundwater, the hydrologic evaluation included four components: physical ET measurements, theoretical ET calculations, analysis of diurnal groundwater table fluctuations, and vadose zone modeling. The direct measurements of ETT (total) were obtained using sap flow meters installed on multiple trees within the barrier. These data were interpreted using a regression model that included theoretical ET calculations and site-specific measurements of weather parameters and poplar trunk area. Application of this model was challenged by the spatial variation in rooting depth as determined by tree excavations. To further quantify the removal of groundwater by the phytobarrier (ETg), the White Method was applied to interpret diurnal groundwater fluctuations from monitoring wells located within the barrier, in conjunction with a variably saturated-saturated flow model configured to confirm water extraction from ETg. Taken together, the results of this five year hydrologic evaluation highlight the complexity in quantifying humid climate groundwater extraction, as a large number of variables were found to influence these rates. Improved understanding of these controls will contribute to improved barrier designs that maximize ETg.

Agave proves to be a low recalcitrant lignocellulosic feedstock for biofuels production on semi-arid lands.

PubMed

Li, Hongjia; Pattathil, Sivakumar; Foston, Marcus B; Ding, Shi-You; Kumar, Rajeev; Gao, Xiadi; Mittal, Ashutosh; Yarbrough, John M; Himmel, Michael E; Ragauskas, Arthur J; Hahn, Michael G; Wyman, Charles E

2014-01-01

Agave, which is well known for tequila and other liquor production in Mexico, has recently gained attention because of its attractive potential to launch sustainable bioenergy feedstock solutions for semi-arid and arid lands. It was previously found that agave cell walls contain low lignin and relatively diverse non-cellulosic polysaccharides, suggesting unique recalcitrant features when compared to conventional C4 and C3 plants. Here, we report sugar release data from fungal enzymatic hydrolysis of non-pretreated and hydrothermally pretreated biomass that shows agave to be much less recalcitrant to deconstruction than poplar or switchgrass. In fact, non-pretreated agave has a sugar release five to eight times greater than that of poplar wood and switchgrass . Meanwhile, state of the art techniques including glycome profiling, nuclear magnetic resonance (NMR), Simon's Stain, confocal laser scanning microscopy and so forth, were applied to measure interactions of non-cellulosic wall components, cell wall hydrophilicity, and enzyme accessibility to identify key structural features that make agave cell walls less resistant to biological deconstruction when compared to poplar and switchgrass. This study systematically evaluated the recalcitrant features of agave plants towards biofuels applications. The results show that not only does agave present great promise for feeding biorefineries on semi-arid and arid lands, but also show the value of studying agave's low recalcitrance for developments in improving cellulosic energy crops.

Soil CO2 flux in alley-cropping systems composed of black locust and poplar trees, Germany

NASA Astrophysics Data System (ADS)

Medinski, Tetiana; Freese, Dirk; Boehm, Christian

2013-04-01

The understanding of soil carbon dynamics after establishment of alley-cropping systems is crucial for mitigation of greenhouse CO2 gas. This study investigates soil CO2 fluxes in alley-cropping systems composed of strips of black locust (Robinia pseudoacacia L.) and poplar (Max 1) trees and adjacent to them crop strips (Lupinus). Soil CO2 flux was measured monthly over a period from March to November 2012, using a LI-COR LI-8100A automated device. Concurrently with CO2 flux measurements, soil and air temperature and soil moisture were recorded within 10 cm of each collar. Soil samples were collected nearby each soil collar for microbial C and hot water-extractable C analyses. At each study plot, root biomass was measured to a depth of 15 cm. In all vegetation types, soil CO2 flux increased from May to August, showing a significant positive correlation with air and soil temperature, which can be a reflection of increase in photosynthesis over the warm summer months. CO2 flux was the highest in poplar followed by black locust and lupines. The relationships between CO2 flux, microbial biomass and hot water-extractable carbon were not straightforward. Among the measured parameters, root density was found to be the main factor to explain the higher CO2 flux in tree strips.

Seasonal variation in the structure of red reflectance of leaves from yellow poplar, red oak, and red maple

NASA Technical Reports Server (NTRS)

Brakke, Thomas W.; Wergin, William P.; Erbe, Eric F.; Harnden, Joann M.

1993-01-01

The light scattered from leaves was measured as a function of view angle in the principal plane for yellow poplar, red oak, and red maple. The source was a parallel-polarized helium-neon laser. Yellow poplar leaves had the highest reflectance of the three species, which may have been due to its shorter palisade cells and more extensive spongy mesophyll. Prior to senescence, there was a significant decrease, but not total extinction, in the reflectance of the beam incident at 60 deg from nadir on the adaxial side of the leaves of all three species. Low-temperature SEM observations showed differences in the surface wax patterns among the three species but did not indicate a cause of the reflectance changes other than possibly the accumulation and aging of the wax.

Intensive plantation culture: 12 years research

Treesearch

Edward A. Hansen

1983-01-01

A collection of papers summarize the status of knowledge for growing hybrid poplars in a short rotation intensively cultured system. The research included studies of propagation, physiology, culture, engineering, insects and diseases, and economics.

A comparison of height growth and leaf parameters of hybrid poplar cuttings grown in ozone-fumigated atmospheres

Treesearch

Keith F. Jensen

1979-01-01

Hybrid poplar cuttings were fumigated with an ozone dosage of 15 ppm-hours. One treatment was a steady fumigation at 0.2 ppm while the second fumigation fluctuated between 0.1 and 0.3 ppm. No significant differences were found in cutting height, leaf area, leaf width, and leaf dry weight, but significant differences were found in chlorophyll content and carbohydrate...

Fertilization Increases Growth of Sawlog-Size Yellow-Poplar and Red Oak in West Virginia

Treesearch

N. I. Lamson

1978-01-01

Sawlog-size even-aged hardwood stands in north-central West Virginia were fertilized with N, P, and K, singly and in combinations. Applications of N alone increased the annual basal area growth of yellow-poplar more than that of red oak during the first 7 years after fertilization, whereas P alone increased the annual basal area growth of red oak more than that of...

Effects of chronic and acute exposure to sulphur dioxide on the growth of hybrid poplar cuttings

Treesearch

Leon S. Dochinger; Keith F. Jensen

1975-01-01

Hybrid poplar clones were fumigated in controlled-environment chambers with either 5 ppm sulphur dioxide for 1½, 3, and 6 h or with 0.25 ppm sulphur dioxide for six weeks. Multivariate analyses were made from shoot-growth data before and after treatment and on the foliar injury induced by S02. Both short- and long-term fumigation produced similar...

Hybrid poplar grows poorly on acid spoil banks at high elevations in West Virginia

Treesearch

George R., Jr. Trimble

1963-01-01

In the early 1950s, a region-wide series of hybrid poplar clonal tests was begun in the Northeast to evaluate the performance of 50 selected clones under a variety of site and climatic conditions. The basic test unit was a block of 50 randomized plots-1 plot for each of the 50 clones. In each plot, 16 cuttings were planted at 4-foot spacing.

Quality Index Tables for Some Eastern Hardwood Species Based on Lumber Prices from 1970 to 1974

Treesearch

Joseph J. Mendel; Margaret K. Peirsol

1977-01-01

Revised quality index (QI) tables for white ash, beech, black cherry, birch, hard maple, soft maple, red oak, white oak, and yellow-poplar are based on 1970-74 lumber prices for the Appalachian and northeastern marketing areas. Changes in QI since 1964-68 were greatest for white oak; there also were significant changes in QI for red oak, white ash, and yellow-poplar....

Evaluation of two hybrid poplar clones as constructed wetland plant species for treating saline water high in boron and selenium, or waters only high in boron

USDA-ARS?s Scientific Manuscript database

Wetland mesocosms were constructed to assess two salt- and B-tolerant hybrid poplar clones (Populus trichocarpa ×P. deltoides×P. nigra '345-1' and '347-14') for treating saline water high in boron (B) and selenium (Se). In addition, a hydroponic experiment was performed to test the B tolerance and B...

Growth and yield for a 7-year-old yellow-poplar plantation in northern West Virginia

Treesearch

John R. Brooks

2013-01-01

Results for several major stand level variables from a 7-year-old yellow-poplar (Liriodendron tulipifera L.) plantation established in a converted pasture in northern West Virginia were summarized based on initial planting densities of 1,517 trees/ac, 972 trees/ac, 765 trees/ac, and 602 trees/ac. Stand basal area/acre at age 7 was greatest (54.7 ft...

Growth of hybrid poplars in Pennsylvania and Maryland clonal tests

Treesearch

Maurice E., Jr. Demeritt

1981-01-01

Average 4-year-height of 199 hybrid poplar clones ranged from 5.1 to 26.0 feet in Pennsylvania and 5.6 to 22.7 feet in Maryland. Several rapid-growing clones grew well at both locations, but height growth was affected by interactions of clones and location. The clones that grew best on both sites averaged 4 to 6 feet of height growth per year.

Boron accumulation and toxicity in hybrid poplar (Populus nigra × euramericana).

PubMed

Rees, Rainer; Robinson, Brett H; Menon, Manoj; Lehmann, Eberhard; Günthardt-Goerg, Madeleine S; Schulin, Rainer

2011-12-15

Poplars accumulate high B concentrations and are thus used for the phytomanagement of B contaminated soils. Here, we performed pot experiments in which Populus nigra × euramericana were grown on a substrate with B concentrations ranging from 13 to 280 mg kg(-1) as H(3)BO(3). Salix viminalis, Brassica juncea, and Lupinus albus were grown under some growing conditions for comparison. Poplar growth was unaffected at soil B treatment levels up to 93 mg kg(-1). Growth was progressively reduced at levels of 168 and 280 mg kg(-1). None of the other species survived at these substrate B levels. At leaf B concentrations <900 mg kg(-1) only <10% of the poplar leaf area showed signs of toxicity. Neutron radiography revealed that chlorotic leaf tissues had B concentrations of 1000-2000 mg kg(-1), while necrotic tissues had >2000 mg kg(-1). Average B concentrations of up to 3500 mg kg(-1) were found in leaves, while spots within leaves had concentrations >7000 mg kg(-1), showing that B accumulation in leaf tissue continued even after the onset of necrosis. The B accumulation ability of P. nigra × euramericana is associated with B hypertolerance in the living tissue and storage of B in dead leaf tissue.

Red Xylem and Higher Lignin Extractability by Down-Regulating a Cinnamyl Alcohol Dehydrogenase in Poplar.

PubMed

Baucher, M.; Chabbert, B.; Pilate, G.; Van Doorsselaere, J.; Tollier, M. T.; Petit-Conil, M.; Cornu, D.; Monties, B.; Van Montagu, M.; Inze, D.; Jouanin, L.; Boerjan, W.

1996-12-01

Cinnamyl alcohol dehydrogenase (CAD) catalyzes the last step in the biosynthesis of the lignin precursors, the monolignols. We have down-regulated CAD in transgenic poplar (Populus tremula X Populus alba) by both antisense and co-suppression strategies. Several antisense and sense CAD transgenic poplars had an approximately 70% reduced CAD activity that was associated with a red coloration of the xylem tissue. Neither the lignin amount nor the lignin monomeric composition (syringyl/guaiacyl) were significantly modified. However, phloroglucinol-HCl staining was different in the down-regulated CAD plants, suggesting changes in the number of aldehyde units in the lignin. Furthermore, the reactivity of the cell wall toward alkali treatment was altered: a lower amount of lignin was found in the insoluble, saponified residue and more lignin could be precipitated from the soluble alkali fraction. Moreover, large amounts of phenolic compounds, vanillin and especially syringaldehyde, were detected in the soluble alkali fraction of the CAD down-regulated poplars. Alkaline pulping experiments on 3-month-old trees showed a reduction of the kappa number without affecting the degree of cellulose degradation. These results indicate that reducing the CAD activity in trees might be a valuable strategy to optimize certain processes of the wood industry, especially those of the pulp and paper industry.

Monitoring the effect of poplar trees on petroleum-hydrocarbon and chlorinated-solvent contaminated ground water

USGS Publications Warehouse

Landmeyer, James E.

2001-01-01

At contaminated groundwater sites, poplar trees can be used to affect ground-water levels, flow directions, and ultimately total groundwater and contaminant flux to areas downgradient of the trees. The magnitude of the hydrologic changes can be monitored using fundamental concepts of groundwater hydrology, in addition to plant physiology-based approaches, and can be viewed as being almost independent of the contaminant released. The affect of poplar trees on the fate of groundwater contaminants, however, is contaminant dependent. Some petroleum hydrocarbons or chlorinated solvents may be mineralized or transformed to innocuous compounds by rhizospheric bacteria associated with the tree roots, mineralized or transformed by plant tissues in the transpiration stream or leaves after uptake, or passively volatilized and rapidly dispersed or oxidized in the atmosphere. These processes also can be monitored using a combination of physiological- or geochemical-based field or laboratory approaches. When combined, such hydrologic and contaminant monitoring approaches can result in a more accurate assessment of the use of poplar trees to meet regulatory goals at contaminated groundwater sites, verify that these goals continue to be met in the future, and ultimately lead to a consensus on how the performance of plant-based remedial strategies (phytoremediation) is to be assessed.

A System for Dosage-Based Functional Genomics in Poplar

DOE Office of Scientific and Technical Information (OSTI.GOV)

Henry, Isabelle M.; Zinkgraf, Matthew S.; Groover, Andrew T.

Altering gene dosage through variation in gene copy number is a powerful approach to addressing questions regarding gene regulation, quantitative trait loci, and heterosis, but one that is not easily applied to sexually transmitted species. Elite poplar (Populus spp) varieties are created through interspecific hybridization, followed by clonal propagation. Altered gene dosage relationships are believed to contribute to hybrid performance. Clonal propagation allows for replication and maintenance of meiotically unstable ploidy or structural variants and provides an alternative approach to investigating gene dosage effects not possible in sexually propagated species. Here, we built a genome-wide structural variation system for dosage-basedmore » functional genomics and breeding of poplar. We pollinated Populus deltoides with gamma-irradiated Populus nigra pollen to produce >500 F1 seedlings containing dosage lesions in the form of deletions and insertions of chromosomal segments (indel mutations). Using high-precision dosage analysis, we detected indel mutations in ~55% of the progeny. These indels varied in length, position, and number per individual, cumulatively tiling >99% of the genome, with an average of 10 indels per gene. Combined with future phenotype and transcriptome data, this population will provide an excellent resource for creating and characterizing dosage-based variation in poplar, including the contribution of dosage to quantitative traits and heterosis.« less

Impact of lignin polymer backbone esters on ionic liquid pretreatment of poplar

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Kwang Ho; Dutta, Tanmoy; Ralph, John

Biomass pretreatment remains an essential step in lignocellulosic biofuel production, largely to facilitate the efficient removal of lignin and increase enzyme accessibility to the polysaccharides. In recent years, there have been significant efforts in planta to reduce lignin content or modify its composition to overcome the inherent recalcitrance that it imposes on lignocellulosic biomass during processing. Here, transgenic poplar lines in which monolignol ferulate conjugates were synthesized during cell wall development to introduce, during lignification, readily cleavable ester linkages into the lignin polymer backbone (i.e., "zip lignin"), along with wild-type (WT) controls, were pretreated with different ionic liquids (ILs). Themore » strategic introduction of ester bonds into the lignin backbone resulted in increased pretreatment efficiency and released more carbohydrates with lower energy input. After pretreatment with any of three different ILs, and after limited saccharification, the transgenic poplars, especially those with relatively higher amounts of incorporated monolignol ferulate conjugates, yielded up to 23% higher sugar levels compared to WT plants. Our findings clearly demonstrate that the introduction of ester linkages into the lignin polymer backbone decreases biomass recalcitrance in poplar has the potential to reduce the energy and/or amount of IL required for effective pretreatment, and could enable the development of an economically viable and sustainable biorefinery process.« less

A System for Dosage-Based Functional Genomics in Poplar

DOE PAGES

Henry, Isabelle M.; Zinkgraf, Matthew S.; Groover, Andrew T.; ...

2015-08-28

Altering gene dosage through variation in gene copy number is a powerful approach to addressing questions regarding gene regulation, quantitative trait loci, and heterosis, but one that is not easily applied to sexually transmitted species. Elite poplar (Populus spp) varieties are created through interspecific hybridization, followed by clonal propagation. Altered gene dosage relationships are believed to contribute to hybrid performance. Clonal propagation allows for replication and maintenance of meiotically unstable ploidy or structural variants and provides an alternative approach to investigating gene dosage effects not possible in sexually propagated species. Here, we built a genome-wide structural variation system for dosage-basedmore » functional genomics and breeding of poplar. We pollinated Populus deltoides with gamma-irradiated Populus nigra pollen to produce >500 F1 seedlings containing dosage lesions in the form of deletions and insertions of chromosomal segments (indel mutations). Using high-precision dosage analysis, we detected indel mutations in ~55% of the progeny. These indels varied in length, position, and number per individual, cumulatively tiling >99% of the genome, with an average of 10 indels per gene. Combined with future phenotype and transcriptome data, this population will provide an excellent resource for creating and characterizing dosage-based variation in poplar, including the contribution of dosage to quantitative traits and heterosis.« less

Impact of lignin polymer backbone esters on ionic liquid pretreatment of poplar

DOE PAGES

Kim, Kwang Ho; Dutta, Tanmoy; Ralph, John; ...

2017-04-20

Biomass pretreatment remains an essential step in lignocellulosic biofuel production, largely to facilitate the efficient removal of lignin and increase enzyme accessibility to the polysaccharides. In recent years, there have been significant efforts in planta to reduce lignin content or modify its composition to overcome the inherent recalcitrance that it imposes on lignocellulosic biomass during processing. Here, transgenic poplar lines in which monolignol ferulate conjugates were synthesized during cell wall development to introduce, during lignification, readily cleavable ester linkages into the lignin polymer backbone (i.e., "zip lignin"), along with wild-type (WT) controls, were pretreated with different ionic liquids (ILs). Themore » strategic introduction of ester bonds into the lignin backbone resulted in increased pretreatment efficiency and released more carbohydrates with lower energy input. After pretreatment with any of three different ILs, and after limited saccharification, the transgenic poplars, especially those with relatively higher amounts of incorporated monolignol ferulate conjugates, yielded up to 23% higher sugar levels compared to WT plants. Our findings clearly demonstrate that the introduction of ester linkages into the lignin polymer backbone decreases biomass recalcitrance in poplar has the potential to reduce the energy and/or amount of IL required for effective pretreatment, and could enable the development of an economically viable and sustainable biorefinery process.« less

Determination of Fe, Hg, Mn, and Pb in three-rings of poplar (Populus alba L.) by U-shaped DC arc

NASA Astrophysics Data System (ADS)

Marković, D. M.; Novović, I.; Vilotić, D.; Ignjatović, Lj.

2007-09-01

The U-shaped DC arc with aerosol supply was applied for the determination of Fe, Hg, Mn, and Pb in poplar (Populus alba L.) tree-rings. By optimization of the operating parameters and by selection of the most appropriate signal integration time (20 s for Fe, Mn, and Pb and 30 s for Hg), the obtained limits of detection for Fe, Hg, Mn, and Pb are 5.8, 2.6, 1.6, and 2.0 ng/ml, respectively. The detection limits achieved by this method for Fe, Hg, Mn, and Pb are comparable with the detection limits obtained for these elements by such methods as inductively coupled plasma-atomic emission spectrometry (ICP-AES), direct coupled plasmatomic emission spectrometry (DCP-AES), and microwave-induced plasma-atomic emission spectrometry (MIP-AES). We used the tree-rings of poplar from two different locations. The first one is in the area close to the power plant “Nikola Tesla” TENT A, Obrenovac, while the other one is in the urban area of Novi Sad. In almost all cases, samples from the location at Obrenovac registered elevated average concentrations of Fe, Hg, Mn, and Pb in the tree-rings of poplar.

RESTORING SUSTAINABLE FORESTS ON APPALACHIAN MINED LANDS FOR WOOD PRODUCTS, RENEWABLE ENERGY, CARBON SEQUESTRATION, AND OTHER ECOSYSTEM SERVICES

DOE Office of Scientific and Technical Information (OSTI.GOV)

James A. Burger; J. Galbraith; T. Fox

2005-06-08

The overall purpose of this project is to evaluate the biological and economic feasibility of restoring high-quality forests on mined land, and to measure carbon sequestration and wood production benefits that would be achieved from forest restoration procedures. We are currently estimating the acreage of lands in VA, WV, KY, OH, and PA mined under SMCRA and reclaimed to non-forested post-mining land uses that are not currently under active management, and therefore can be considered as available for carbon sequestration. To determine actual sequestration under different forest management scenarios, a field study was installed as a 3 x 3 factorialmore » in a random complete block design with three replications at each of three locations, Ohio, West Virginia, and Virginia. The treatments included three forest types (white pine, hybrid poplar, mixed hardwood) and three silvicultural regimes (competition control, competition control plus tillage, competition control plus tillage plus fertilization). Each individual treatment plot is 0.5 acres. Each block of nine plots is 4.5 acres, and the complete installation at each site is 13.5 acres. During the reporting period we compiled and evaluated all soil properties measured on the study sites. Statistical analysis of the properties was conducted, and first year survival and growth of white pine, hybrid poplars, and native hardwoods was assessed. Hardwood species survived better at all sites than white pine or hybrid poplar. Hardwood survival across treatments was 80%, 85%, and 50% for sites in Virginia, West Virginia, and Ohio, respectively, while white pine survival was 27%, 41%, and 58%, and hybrid poplar survival was 37%, 41%, and 72% for the same sites, respectively. Hybrid poplar height and diameter growth were superior to those of the other species tested, with the height growth of this species reaching 126.6cm after one year in the most intensive treatment at the site in Virginia. To determine carbon in soils on these sites, we developed a cost-effective method for partitioning total soil carbon to pedogenic carbon and geogenic carbon in mine soils. We are in the process of evaluating the accuracy and precision of the proposed carbon partitioning technique for which we are designing an experiment with carefully constructed mine soil samples. In a second effort, as part of a mined land reforestation project for carbon sequestration in southwestern Virginia we implemented the first phase of the carbon monitoring protocol that was recently delivered to DOE.« less

Lime pretreatment of lignocellulosic biomass

NASA Astrophysics Data System (ADS)

Chang, Shushien

Lignocellulose is a valuable alternative energy source. The susceptibility of lignocellulosic biomass to enzymatic hydrolysis is constrained due to its structural features, so pretreatment is essential to enhance enzymatic digestibility. Of the chemicals used as pretreatment agents, it has been reported that alkalis improve biomass digestibility significantly. In comparison with other alkalis such as NaOH and ammonia, lime (calcium hydroxide) has many advantages; it is very inexpensive, is safe, and can be recovered by carbonating wash water. The effects of lime pretreatment were explored on switchgrass and poplar wood, representing herbaceous and woody biomass, respectively. The effects of pretreatment conditions (time, temperature, lime loading, water loading, particle size, and oxygen pressure) have been systematically studies. Lime alone enhances the digestibility of switchgrass significantly; under the recommended conditions, the 3-d total sugar (glucose + xylose) yields of lime-treated switchgrass were 7 times that of untreated sample. When treating poplar wood, lime must be combined with oxygen to achieve high digestibility; oxidative lime pretreatment increased the 3-d total sugar yield of poplar wood to 12 times that of untreated sample. In a fundamental study, to determine why lime pretreatment is effective, the effects of three structural features on enzymatic digestibility were studied: lignin content, acetyl content, and crystallinity index (CrI). Poplar wood was treated with peracetic acid, potassium hydroxide, and ball milling to produce model lignocelluloses with a broad spectrum of lignin contents, acetyl contents, and CrI, respectively. Enzymatic hydrolysis was performed on the model lignocelluloses to determine the digestibility. Correlations between lignin/carbohydrate ratio, acetyl/carbohydrate ratio, CrI and digestibility were developed. The 95% prediction intervals show that the correlations predict the 1-h and 3-d total sugar conversions of a biomass sample within a precision of 5% and 20%, respectively. The digestibility of a variety of lime-treated biomass and ball-milled alpha-cellulose was compared to the correlations determined from the model compounds. The agreement between the measured and predicted values shows that the correlations are satisfactory and the three structural features---lignin content, acetyl content, and CrI---are the major factors that determine enzymatic digestibility.

Comparative genomic analysis of the WRKY III gene family in populus, grape, arabidopsis and rice.

PubMed

Wang, Yiyi; Feng, Lin; Zhu, Yuxin; Li, Yuan; Yan, Hanwei; Xiang, Yan

2015-09-08

WRKY III genes have significant functions in regulating plant development and resistance. In plant, WRKY gene family has been studied in many species, however, there still lack a comprehensive analysis of WRKY III genes in the woody plant species poplar, three representative lineages of flowering plant species are incorporated in most analyses: Arabidopsis (a model plant for annual herbaceous dicots), grape (one model plant for perennial dicots) and Oryza sativa (a model plant for monocots). In this study, we identified 10, 6, 13 and 28 WRKY III genes in the genomes of Populus trichocarpa, grape (Vitis vinifera), Arabidopsis thaliana and rice (Oryza sativa), respectively. Phylogenetic analysis revealed that the WRKY III proteins could be divided into four clades. By microsynteny analysis, we found that the duplicated regions were more conserved between poplar and grape than Arabidopsis or rice. We dated their duplications by Ks analysis of Populus WRKY III genes and demonstrated that all the blocks were formed after the divergence of monocots and dicots. Strong purifying selection has played a key role in the maintenance of WRKY III genes in Populus. Tissue expression analysis of the WRKY III genes in Populus revealed that five were most highly expressed in the xylem. We also performed quantitative real-time reverse transcription PCR analysis of WRKY III genes in Populus treated with salicylic acid, abscisic acid and polyethylene glycol to explore their stress-related expression patterns. This study highlighted the duplication and diversification of the WRKY III gene family in Populus and provided a comprehensive analysis of this gene family in the Populus genome. Our results indicated that the majority of WRKY III genes of Populus was expanded by large-scale gene duplication. The expression pattern of PtrWRKYIII gene identified that these genes play important roles in the xylem during poplar growth and development, and may play crucial role in defense to drought stress. Our results presented here may aid in the selection of appropriate candidate genes for further characterization of their biological functions in poplar.

Constitutive expression of the poplar WRKY transcription factor PtoWRKY60 enhances resistance to Dothiorella gregaria Sacc. in transgenic plants.

PubMed

Ye, Shenglong; Jiang, Yuanzhong; Duan, Yanjiao; Karim, Abdul; Fan, Di; Yang, Li; Zhao, Xin; Yin, Jia; Luo, Keming

2014-10-01

WRKY proteins are involved in various physiological processes in plants, especially in coping with diverse biotic and abiotic stresses. However, limited information is available on the roles of specific WRKY transcription factors in poplar defense. In this study, we reported the characterization of PtoWRKY60, a Group IIa WRKY member, from Populus tomentosa Carr. The gene expression profile of PtoWRKY60 in various tissues showed that it significantly accumulated in old leaves. Phylogenetic analyses revealed that PtoWRKY60 had a close relationship with AtWRKY18, AtWRKY40 and AtWRKY60. PtoWRKY60 was induced mainly by salicylic acid (SA) and slightly by Dothiorella gregaria Sacc., jasmonic acid, wounding treatment, low temperature and salinity stresses. Overexpression of PtoWRKY60 in poplar resulted in increased resistance to D. gregaria. The defense-associated genes, such as PR5.1, PR5.2, PR5.4, PR5.5 and CPR5, were markedly up-regulated in transgenic plants overexpressing PtoWRKY60. These results indicate that PtoWRKY60 might be partly involved in the signal transduction pathway initiated by SA in Populus. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Phytoscreening and phytoextraction of heavy metals at Danish polluted sites using willow and poplar trees.

PubMed

Algreen, Mette; Trapp, Stefan; Rein, Arno

2014-01-01

The main purpose of this study was to determine typical concentrations of heavy metals (HM) in wood from willows and poplars, in order to test the feasibility of phytoscreening and phytoextraction of HM. Samples were taken from one strongly, one moderately, and one slightly polluted site and from three reference sites. Wood from both tree species had similar background concentrations at 0.5 mg kg(-1) for cadmium (Cd), 1.6 mg kg(-1) for copper (Cu), 0.3 mg kg(-1) for nickel (Ni), and 25 mg kg(-1) for zinc (Zn). Concentrations of chromium (Cr) and lead (Pb) were below or close to detection limit. Concentrations in wood from the highly polluted site were significantly elevated, compared to references, in particular for willow. The conclusion from these results is that tree coring could be used successfully to identify strongly heavy metal-polluted soil for Cd, Cu, Ni, Zn, and that willow trees were superior to poplars, except when screening for Ni. Phytoextraction of HMs was quantified from measured concentration in wood at the most polluted site. Extraction efficiencies were best for willows and Cd, but below 0.5% over 10 years, and below 1‰ in 10 years for all other HMs.

Contrasting colonization and plant growth promoting capacity between wild type and gfp-derative of the endophyte Pseudomonas putida W619 in hybrid poplar

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weyens N.; van der Lelie D.; Boulet, J.

2011-06-09

This study aims to investigate the colonization of poplar by the endophyte Pseudomonas putida W619 and its capacity to promote plant growth. Poplar cuttings were inoculated with P. putida W619 (wild-type or gfp-labelled). The colonization of both strains was investigated and morphological, physiological and biochemical parameters were analyzed to evaluate plant growth promotion. Inoculation with P. putida W619 (wild-type) resulted in remarkable growth promotion, decreased activities of antioxidative defence related enzymes, and reduced stomatal resistance, all indicative of improved plant health and growth in comparison with the non-inoculated cuttings. In contrast, inoculation with gfp-labelled P. putida W619 did not promotemore » growth; it even had a negative effect on plant health and growth. Furthermore, compared to the wildtype strain, colonization by the gfp-labelled P. putida W619::gfp1 was much lower; it only colonized the rhizosphere and root cortex while the wild-type strain also colonized the root xylem vessels. Despite the strong plant growth promoting capacity of P. putida W619 (wild-type), after gfp labelling its growth promoting characteristics disappeared and its colonization capacity was strongly influenced; for these reasons gfp labelling should be applied with sufficient caution.« less

Final Environmental Assessment: For Joint Base Anacostia-Bolling Master Plan District of Columbia

DTIC Science & Technology

2010-09-30

the impacts of vehicle travel and facilitate alternative modes of transportation that would reduce air pollutants . Noise: There would be...ltlb•nKM nr~t~~G.,~ StEiiubetlls Fort McNair East Potomac Pari < Poplar Point "" Joint Base Anacostia-Bolling Master Plan Environmental...Industrial $uppon Eost Potomac Pari < Poplar Point Joint Base Anacostia-Bolling Master Plan Environmental Assessment pg. 16 Several general

High-temperature drying of 7/4 yellow-poplar flitches for S-D-R studs

Treesearch

R. Sidney Boone; Robert R. Maeglin

1980-01-01

Yellow-poplar was dried as 7/4 flitches at high temperatures and subsequently ripped into studs to meet National Grading Rule Standards for STUD grade. The effects of growth stresses in these flitches from smaller logs appear to be minimized by this process. Dry bulb temperatures from 235° to 295° F were explored in five drying trials. Best results were by drying for...

A Catskill Flora and Economic Botany, III: Apetalae. Including the Poplars, Willows, Hickories, Birches, Beeches, Oaks, Elms, Nettles, Sorrels, Docks, and Smartweeds. Bulletin No. 443, New York State Museum.

ERIC Educational Resources Information Center

Brooks, Karl L.

This compendium deals with the ecology and economic importance of the poplars, willows, hickories, birches, beeches, oaks, elms, nettles, sorrels, docks, and smartweeds growing in New York's Catskills. Provided are keys for identifying each plant to species by flowers, foliage, or winter buds. A line drawing accompanies a summary of basic data…

Thermogravimetric characteristics of typical municipal solid waste fractions during co-pyrolysis.

PubMed

Zhou, Hui; Long, YanQiu; Meng, AiHong; Li, QingHai; Zhang, YanGuo

2015-04-01

The interactions of nine typical municipal solid waste (MSW) fractions during pyrolysis were investigated using the thermogravimetric analyzer (TGA). To compare the mixture results with the calculation results of superposition of single fractions quantitatively, TG overlap ratio was introduced. There were strong interactions between orange peel and rice (overlap ratio 0.9736), and rice and poplar wood (overlap ratio 0.9774). The interactions of mixture experiments postponed the peak and lowered the peak value. Intense interactions between PVC and rice, poplar wood, tissue paper, wool, terylene, and rubber powder during co-pyrolysis were observed, and the pyrolysis at low temperature was usually promoted. The residue yield was increased when PVC was blended with rice, poplar wood, tissue paper, or rubber powder; while the residue yield was decreased when PVC was blended with wool. Copyright © 2014 Elsevier Ltd. All rights reserved.

Tree and stand water fluxes of hybrid poplar clone (Populus nigra x P. maximowiczii) in short rotation coppice culture

NASA Astrophysics Data System (ADS)

Fischer, M.; Trnka, M.; Kucera, J.; Zalud, Z.

2010-09-01

This study reports on evapotranspiration and tree water use in short rotation coppice culture of hybrid poplar (Populus nigra x P. maximowiczii) for biomass energy in the Czech Republic. The high density poplar plantation (10 000 trees per ha) was established in 2003 on arable land in Czech-Moravian Highland (49°32´ N, 16°15´ E, 530 m a.s.l.) and has been coppiced in rotation period of 7 years. Firstly, evapotranspiration of the stand has been estimated by applying the Bowen ratio-energy budget method, which is considered as reliable, robust, quite simple and inexpensive technique with comparable results to eddy covariance and lysimeters. The gaps in evapotranspiration diurnal patterns caused by limitation of the bowen ratio method were filled with simple linear regression model based on relation between potential and actual evapotranspiration with regard to soil water availability and leaf area index and thus the daily, monthly and seasonal totals could be calculated. The amount of evapotranspiration during the growing season 2009 (1 March - 31 October) was 593 mm with highest monthly total 116 mm in June. Mean daily water loss over the season reached 2.43 mm per day. During the hot summer day, the maximal value 5.73 mm per day, which presented 89 % of potential evapotranspiration calculated by Penman equation, was recorded with a peak rate 0.94 mm per hour. Secondly, the transpiration was measured by sap flow tissue heat balance techniques on four individual trees with greatest stem diameters (11 - 12 cm d.b.h.) and height of 12 - 12.5 m. Relatively high transpiration values by the poplars were found during the measured part of growing season (18 June - 31 October), with maximum and mean daily transpiration of 44.41 dm3 and 16.69 dm3 per day, respectively. The seasonal transpiration of the most vigorous from the investigated individuals amounted 2542 dm3. Because in this study we didńt evaluate the transpiration of thinner trees (technical features of sap flow method dońt enable to assess trees smaller than 10 cm and bigger than 2 cm d.b.h.), scaling the transpiration to the whole stand through the relation between leaf area index, d.b.h. and the sap flow is under evaluation and results will be presented at the conference. The presentation will also include comparison between actual evapotranspiration over the reference grass surface in the immediate vicinity of the poplar plantation. The differences between the actual evapotranspiration and transpiration of the poplar stand and other special features of this bioenergy production system will be revealed in more detail. Acknowledgement: We gratefully acknowledge the support of the In-house Grant Agency at Mendel university in Brno no. IP 19/2010, In-house Grant Agency at Mendel university in Brno no. TP 11/2010 and the Research plan no. MSM6215648905 "Biological and technological aspects of sustainability of controlled ecosystems and their adaptability to climate change".

Behavior of selected hydrolyzed and dehydrated products during hydrothermal carbonization of biomass.

PubMed

Reza, M Toufiq; Wirth, Benjamin; Lüder, Ulf; Werner, Maja

2014-10-01

In this study, effects of reaction temperature and reaction time on both solid hydrochar and HTC process liquid products were studied for hydrothermal carbonization (HTC) of cellulose, wheat straw, and poplar. A novel slurry sampling system was designed and used with an 18.6L Parr reactor for 0-480 min in 200, 230, and 260 °C. Sugars (sucrose, glucose, and fructose), HMF, and furfural were found maximum in lower HTC temperature and time. However, they degrade following first order degradation kinetics. Activation energies of total sugars (glucose, fructose, sucrose, and xylose), furfural, and HMF for straw and poplar were 95-127, 130-135, and 74-90 kJ mol(-1), respectively and individuals were lower for HTC of cellulose than others. Organic acids (acetic acid, formic acid, and lactic acid) and phenolic compounds (phenol, catechol, and guaiacol) were increasing with higher HTC severity. Copyright © 2014 Elsevier Ltd. All rights reserved.

Combining proteomics and metabolite analyses to unravel cadmium stress-response in poplar leaves.

PubMed

Kieffer, Pol; Planchon, Sébastien; Oufir, Mouhssin; Ziebel, Johanna; Dommes, Jacques; Hoffmann, Lucien; Hausman, Jean-François; Renaut, Jenny

2009-01-01

A proteomic analysis of poplar leaves exposed to cadmium, combined with biochemical analysis of pigments and carbohydrates revealed changes in primary carbon metabolism. Proteomic results suggested that photosynthesis was slightly affected. Together with a growth inhibition, photoassimilates were less needed for developmental processes and could be stored in the form of hexoses or complex sugars, acting also as osmoprotectants. Simultaneously, mitochondrial respiration was upregulated, providing energy needs of cadmium-exposed plants.

Agave proves to be a low recalcitrant lignocellulosic feedstock for biofuels production on semi-arid lands

PubMed Central

2014-01-01

Background Agave, which is well known for tequila and other liquor production in Mexico, has recently gained attention because of its attractive potential to launch sustainable bioenergy feedstock solutions for semi-arid and arid lands. It was previously found that agave cell walls contain low lignin and relatively diverse non-cellulosic polysaccharides, suggesting unique recalcitrant features when compared to conventional C4 and C3 plants. Results Here, we report sugar release data from fungal enzymatic hydrolysis of non-pretreated and hydrothermally pretreated biomass that shows agave to be much less recalcitrant to deconstruction than poplar or switchgrass. In fact, non-pretreated agave has a sugar release five to eight times greater than that of poplar wood and switchgrass . Meanwhile, state of the art techniques including glycome profiling, nuclear magnetic resonance (NMR), Simon’s Stain, confocal laser scanning microscopy and so forth, were applied to measure interactions of non-cellulosic wall components, cell wall hydrophilicity, and enzyme accessibility to identify key structural features that make agave cell walls less resistant to biological deconstruction when compared to poplar and switchgrass. Conclusions This study systematically evaluated the recalcitrant features of agave plants towards biofuels applications. The results show that not only does agave present great promise for feeding biorefineries on semi-arid and arid lands, but also show the value of studying agave’s low recalcitrance for developments in improving cellulosic energy crops. PMID:24708685

Overexpression of two PsnAP1 genes from Populus simonii × P. nigra causes early flowering in transgenic tobacco and Arabidopsis.

PubMed

Zheng, Tangchun; Li, Shuang; Zang, Lina; Dai, Lijuan; Yang, Chuanping; Qu, Guan-Zheng

2014-01-01

In Arabidopsis, AP1 is a floral meristem identity gene and plays an important role in floral organ development. In this study, PsnAP1-1 and PsnAP1-2 were isolated from the male reproductive buds of poplar (Populus simonii × P. nigra), which are the orthologs of AP1 in Arabidopsis, by sequence analysis. Northern blot and qRT-PCR analysis showed that PsnAP1-1 and PsnAP1-2 exhibited high expression level in early inflorescence development of poplar. Subcellular localization showed the PsnAP1-1 and PsnAP1-2 proteins are localized in the nucleus. Overexpression of PsnAP1-1 and PsnAP1-2 in tobacco under the control of a CaMV 35S promoter significantly enhanced early flowering. These transgenic plants also showed much earlier stem initiation and higher rates of photosynthesis than did wild-type tobacco. qRT-PCR analysis further indicated that overexpression of PsnAP1-1 and PsnAP1-2 resulted in up-regulation of genes related to flowering, such as NtMADS4, NtMADS5 and NtMADS11. Overexpression of PsnAP1-1 and PsnAP1-2 in Arabidopsis also induced early flowering, but did not complement the ap1-10 floral morphology to any noticeable extent. This study indicates that PsnAP1-1 and PsnAP1-2 play a role in floral transition of poplar.

ITS2 sequence-structure phylogeny reveals diverse endophytic Pseudocercospora fungi on poplars.

PubMed

Yan, Dong-Hui; Gao, Qian; Sun, Xiaoming; Song, Xiaoyu; Li, Hongchang

2018-04-01

For matching the new fungal nomenclature to abolish pleomorphic names for a fungus, a genus Pseudocercospora s. str. was suggested to host holomorphic Pseudocercosproa fungi. But the Pseudocercosproa fungi need extra phylogenetic loci to clarify their taxonomy and diversity for their existing and coming species. Internal transcribed spacer 2 (ITS2) secondary structures have been promising in charactering species phylogeny in plants, animals and fungi. In present study, a conserved model of ITS2 secondary structures was confirmed on fungi in Pseudocercospora s. str. genus using RNAshape program. The model has a typical eukaryotic four-helix ITS2 secondary structure. But a single U base occurred in conserved motif of U-U mismatch in Helix 2, and a UG emerged in UGGU motif in Helix 3 to Pseudocercospora fungi. The phylogeny analyses based on the ITS2 sequence-secondary structures with compensatory base change characterizations are able to delimit more species for Pseudocercospora s. str. than phylogenic inferences of traditional multi-loci alignments do. The model was employed to explore the diversity of endophytic Pseudocercospora fungi in poplar trees. The analysis results also showed that endophytic Pseudocercospora fungi were diverse in species and evolved a specific lineage in poplar trees. This work suggested that ITS2 sequence-structures could become as additionally significant loci for species phylogenetic and taxonomic studies on Pseudocerospora fungi, and that Pseudocercospora endophytes could be important roles to Pseudocercospora fungi's evolution and function in ecology.

Heterologous overexpression of the birch FRUITFULL-like MADS-box gene BpMADS4 prevents normal senescence and winter dormancy in Populus tremula L.

PubMed

Hoenicka, Hans; Nowitzki, Olaf; Hanelt, Dieter; Fladung, Matthias

2008-04-01

MADS-box genes have been shown to be important to flower and vegetative tissue development, senescence and winter dormancy in many plant species. Heterologous overexpression of known MADS-box genes has also been used for unravelling gene regulation mechanisms in forest tree species. The constitutive expression of the BpMADS4 gene from birch in poplar, known to induce early flowering in birch and apple, induced broad changes in senescence and winter dormancy but no early flowering. Other analyses revealed that 35S::BpMADS4 poplars maintained photosynthetic activity, chlorophyll and proteins in leaves under winter conditions. BpMADS4 may be influencing transcription factors regulating the senescence and dormancy process due to homology with poplar proteins related to both traits. Little is known of the regulatory genes that co-ordinate senescence, dormancy, chlorophyll/protein degradation, and photosynthesis at the molecular level. Dissecting the molecular characteristics of senescence regulation will probably involve the understanding of multiple and novel regulatory pathways. The results presented here open new horizons for the identification of regulatory mechanisms related to dormancy and senescence in poplar and other temperate tree species. They confirm recent reports of common signalling intermediates between flowering time and growth cessation in trees (Böhlenius et al. in Science 312:1040-1043, 2006) and additionally indicate similar connections between flowering time signals and senescence.

The Potential of the Ni-Resistant TCE-Degrading Pseudomonas putida W619-TCE to Reduce Phytotoxicity and Improve Phytoremediation Efficiency of Poplar Cuttings on A Ni-TCE Co-Contamination.

PubMed

Weyens, Nele; Beckers, Bram; Schellingen, Kerim; Ceulemans, Reinhart; van der Lelie, Daniel; Newman, Lee; Taghavi, Safiyh; Carleer, Robert; Vangronsveld, Jaco

2015-01-01

To examine the potential of Pseudomonas putida W619-TCE to improve phytoremediation of Ni-TCE co-contamination, the effects of inoculation of a Ni-resistant, TCE-degrading root endophyte on Ni-TCE phytotoxicity, Ni uptake and trichloroethylene (TCE) degradation of Ni-TCE-exposed poplar cuttings are evaluated. After inoculation with P. putida W619-TCE, root weight of non-exposed poplar cuttings significantly increased. Further, inoculation induced a mitigation of the Ni-TCE phytotoxicity, which was illustrated by a diminished exposure-induced increase in activity of antioxidative enzymes. Considering phytoremediation efficiency, inoculation with P. putida W619-TCE resulted in a 45% increased Ni uptake in roots as well as a slightly significant reduction in TCE concentration in leaves and TCE evapotranspiration to the atmosphere. These results indicate that endophytes equipped with the appropriate characteristics can assist their host plant to deal with co-contamination of toxic metals and organic contaminants during phytoremediation. Furthermore, as poplar is an excellent plant for biomass production as well as for phytoremediation, the obtained results can be exploited to produce biomass for energy and industrial feedstock applications in a highly productive manner on contaminated land that is not suited for normal agriculture. Exploiting this land for biomass production could contribute to diminish the conflict between food and bioenergy production.

Modeling sustainable reuse of nitrogen-laden wastewater by poplar.

PubMed

Wang, Yusong; Licht, Louis; Just, Craig

2016-01-01

Numerical modeling was used to simulate the leaching of nitrogen (N) to groundwater as a consequence of irrigating food processing wastewater onto grass and poplar under various management scenarios. Under current management practices for a large food processor, a simulated annual N loading of 540 kg ha(-1) yielded 93 kg ha(-1) of N leaching for grass and no N leaching for poplar during the growing season. Increasing the annual growing season N loading to approximately 1,550 kg ha(-1) for poplar only, using "weekly", "daily" and "calculated" irrigation scenarios, yielded N leaching of 17 kg ha(-1), 6 kg ha(-1), and 4 kg ha(-1), respectively. Constraining the simulated irrigation schedule by the current onsite wastewater storage capacity of approximately 757 megaliters (Ml) yielded N leaching of 146 kg ha(-1) yr(-1) while storage capacity scenarios of 3,024 and 4,536 Ml yielded N leaching of 65 and 13 kg ha(-1) yr(-1), respectively, for a loading of 1,550 kg ha(-1) yr(-1). Further constraining the model by the current wastewater storage volume and the available land area (approximately 1,000 hectares) required a "diverse" irrigation schedule that was predicted to leach a weighted average of 13 kg-N ha(-1) yr(-1) when dosed with 1,063 kg-N ha(-1) yr(-1).

Development of supercritical CO2 extraction of bioactive phytochemicals from black poplar (Populus nigra L.) buds followed by GC-MS and UHPLC-DAD-QqTOF-MS.

PubMed

Kuś, Piotr M; Okińczyc, Piotr; Jakovljević, Martina; Jokić, Stela; Jerković, Igor

2018-05-25

The supercritical CO 2 (SC-CO 2 ) extraction process of black poplar (Populus nigra L.) buds was optimized (pressure, temperature) based on the yields of major phytochemicals (volatiles and non-volatiles). The optimal settings were 30 MPa/60 °C. Major volatiles determined by GC-MS in the optimized SC-CO 2 extract (mg of benzyl salicylate equivalent (BSE) per 100 g of buds) were: pinostrobin chalcone (1574.2), β-eudesmol (640.8), α-eudesmol (581.9), 2-methyl-2-butenyl-p-coumarate (289.9), pentyl-p-coumarate (457.0), γ-eudesmol (294.4), and benzyl salicylate (289.2). Partial qualitative similarity was observed between SC-CO 2 extracts and corresponding hydrodistilled essential oil dominated by sesquiterpenes, but with lower yields. Major compounds (mg per 100 g of buds) identified by UHPLC-DAD-QqTOF-MS in the optimized SC-CO 2 extract were: pinostrobin (751.7), pinocembrin (485.6), 3-O-pinobanksin acetate and methyl-butenyl-p-coumarate (290.2; 144.9 of pinobanksin and p-coumaric acid equivalents, respectively). SC-CO 2 extraction was found useful for green, efficient and simultaneous extraction of both volatile/non-volatile, bioactive phytochemicals of poplar buds - precursors of poplar-type propolis. Copyright © 2018 Elsevier B.V. All rights reserved.

Cell wall integrity, genotoxic injury and PCD dynamics in alfalfa saponin-treated white poplar cells highlight a complex link between molecule structure and activity.

PubMed

Paparella, Stefania; Tava, Aldo; Avato, Pinarosa; Biazzi, Elisa; Macovei, Anca; Biggiogera, Marco; Carbonera, Daniela; Balestrazzi, Alma

2015-03-01

In the present work, eleven saponins and three sapogenins purified from Medicago sativa were tested for their cytotoxicity against highly proliferating white poplar (Populus alba L.) cell suspension cultures. After preliminary screening, four saponins with different structural features in terms of aglycone moieties and sugar chains (saponin 3, a bidesmoside of hederagenin; saponins 4 and 5, monodesmoside and bidesmoside of medicagenic acid respectively, and saponin 10, a bidesmoside of zanhic acid) and different cytotoxicity were selected and used for further investigation on their structure-activity relationship. Transmission Electron Microscopy (TEM) analyses provided for the first time evidence of the effects exerted by saponins on plant cell wall integrity. Exposure to saponin 3 and saponin 10 resulted into disorganization of the outer wall layer and the effect was even more pronounced in white poplar cells treated with the two medicagenic acid derivatives, saponins 4 and 5. Oxidative burst and nitric oxide accumulation were common hallmarks of the response of white poplar cells to saponins. When DNA damage accumulation and DNA repair profiles were evaluated by Single Cell Gel Electrophoresis, induction of single and double strand breaks followed by effective repair was observed within 24h. The reported data are discussed in view of the current issues dealing with saponin structure-activity relationship. Copyright © 2015 Elsevier Ltd. All rights reserved.

Male poplars have a stronger ability to balance growth and carbohydrate accumulation than do females in response to a short-term potassium deficiency.

PubMed

Yang, Yanni; Jiang, Hao; Wang, Maolin; Korpelainen, Helena; Li, Chunyang

2015-12-01

Potassium (K) deficiency influences plant performance, such as ion uptake and carbohydrate transport. However, little is known about differences between males and females in response to K deficiency. In this study, dry matter accumulation, photosynthetic capacity, allocation patterns of K(+) , Na(+) and carbohydrates, and ultrastructural changes in males and females of Populus cathayana exposed to K deficiency were investigated. The results indicated that males maintained a significantly higher K(+) content and K(+) /Na(+) ratio in leaves and stems than did females under K deficiency. Moreover, K deficiency significantly increased the sucrose content of females, whereas no significant effect on males was detected. In addition, a comparative analysis showed that males allocated more resources to roots, while females allocated more to leaves, which resulted in sexually different root/shoot (R/S) ratios. Transmission electron microscopic (TEM) observations showed that males suffered fewer injuries than did females. These results suggested that males have a better ability to cope with K deficiency. In addition, the combined effects of salinity and K deficiency on poplars were studied. The results indicated that salt stress aggravates the negative effects caused by K deficiency. Taken together, our study provided evidence for gender-specific strategies in ion and carbohydrate allocation in poplars exposed to a short-term K deficiency. In leaves and stems, the lower K(+) accumulation inhibited sucrose translocation and resulted in a decreased R/S ratio, which may contribute to males having a stronger ability to balance growth and carbohydrate accumulation when compared with females. © 2015 Scandinavian Plant Physiology Society.

Genome Sequence of the Plant Growth Promoting Endophytic Bacterium Enterobacter sp. 638

PubMed Central

Taghavi, Safiyh; van der Lelie, Daniel; Hoffman, Adam; Zhang, Yian-Biao; Walla, Michael D.; Vangronsveld, Jaco; Newman, Lee; Monchy, Sébastien

2010-01-01

Enterobacter sp. 638 is an endophytic plant growth promoting gamma-proteobacterium that was isolated from the stem of poplar (Populus trichocarpa×deltoides cv. H11-11), a potentially important biofuel feed stock plant. The Enterobacter sp. 638 genome sequence reveals the presence of a 4,518,712 bp chromosome and a 157,749 bp plasmid (pENT638-1). Genome annotation and comparative genomics allowed the identification of an extended set of genes specific to the plant niche adaptation of this bacterium. This includes genes that code for putative proteins involved in survival in the rhizosphere (to cope with oxidative stress or uptake of nutrients released by plant roots), root adhesion (pili, adhesion, hemagglutinin, cellulose biosynthesis), colonization/establishment inside the plant (chemiotaxis, flagella, cellobiose phosphorylase), plant protection against fungal and bacterial infections (siderophore production and synthesis of the antimicrobial compounds 4-hydroxybenzoate and 2-phenylethanol), and improved poplar growth and development through the production of the phytohormones indole acetic acid, acetoin, and 2,3-butanediol. Metabolite analysis confirmed by quantitative RT–PCR showed that, the production of acetoin and 2,3-butanediol is induced by the presence of sucrose in the growth medium. Interestingly, both the genetic determinants required for sucrose metabolism and the synthesis of acetoin and 2,3-butanediol are clustered on a genomic island. These findings point to a close interaction between Enterobacter sp. 638 and its poplar host, where the availability of sucrose, a major plant sugar, affects the synthesis of plant growth promoting phytohormones by the endophytic bacterium. The availability of the genome sequence, combined with metabolome and transcriptome analysis, will provide a better understanding of the synergistic interactions between poplar and its growth promoting endophyte Enterobacter sp. 638. This information can be further exploited to improve establishment and sustainable production of poplar as an energy feedstock on marginal, non-agricultural soils using endophytic bacteria as growth promoting agents. PMID:20485560

Plant responses to elevated atmospheric CO/sub 2/ with emphasis on belowground processes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Norby, R.J.; Luxmoore, R.J.; O'Neill, E.G.

1984-12-01

Consideration of the interrelationships between carbon, water, and nutrient pathways in soil-plant systems has led to the hypothesis that stimulation of root and rhizosphere processes by elevated levels of CO/sub 2/ will increase nutrient availability and lead to an increase in plant growth. Several experiments were conducted to investigate the effects of CO/sub 2/ concentration on carbon allocation, root exudation, nitrogen utilization, and microbial responses, as well as overall plant growth and nutrient utilization. Increases in the growth of yellow-poplar (Liriodendron tulipifera L.) seedlings in response to elevated CO/sub 2/ were demonstrated even when the plants were under apparent nutrientmore » limitation in a forest soil. The proportion of photosynthetically fixed carbon that was allocated to the roots of yellow-poplar and hazel alder (Alnus serrulata (Ait.) Willd.) seedlings was greater at 700 ppM CO/sub 2/ than at ambient CO/sub 2/. Exudation of carbon from yellow-poplar roots also tended to be higher in elevated CO/sub 2/. Responses of rhizosphere microbial populations to elevated CO/sub 2/ were inconsistent, but there was a trend toward relatively fewer ammonium oxidizers, nitrite oxidizers, and phosphate solubilizers in the rhizosphere population of yellow-poplar seedlings grown in 700 ppM CO/sub 2/ compared to that of seedlings grown in ambient CO/sub 2/. Other observed trends included increased nodulation and nitrogenase activity and decreased nitrate reductase activity in hazel alder seedlings in elevated CO/sub 2/. Net uptake of some essential plant nutrients, aluminum, and other trace metals by Virginia pine (Pinus virginiana Mill.) increased with increasing CO/sub 2/ concentration. There was less leaching of some nutrients from soil-plant systems with Virginia pine and yellow-poplar seedlings but increased leaching of zinc. 123 references, 16 figures, 17 tables.« less

Predicting the effect of deep-rooted hybrid poplars on the groundwater flow system at a large-scale phytoremediation site.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Quinn, J. J.; Negri, M. C.; Hinchman, R. R.

2001-03-01

Estimating the effect of phreatophytes on the groundwater flow field is critical in the design or evaluation of a phytoremediation system. Complex hydrogeological conditions and the transient water use rates of trees require the application of numerical modeling to address such issues as hydraulic containment, seasonality, and system design. In 1999, 809 hybrid poplars and willows were planted to phytoremediate the 317 and 319 Areas of Argonne National Laboratory near Chicago, Illinois. Contaminants of concern are volatile organic compounds and tritium. The site hydrogeology is a complex framework of glacial tills interlaced with sands, gravels, and silts of varying character,more » thickness, and lateral extent. A total of 420 poplars were installed using a technology to direct the roots through a 25-ft (8-m)-thick till to a contaminated aquifer. Numerical modeling was used to simulate the effect of the deep-rooted poplars on this aquifer of concern. Initially, the best estimates of input parameters and boundary conditions were determined to provide a suitable match to historical transient ground-water flow conditions. The model was applied to calculate the future effect of the developing deep-rooted poplars over a 6 year period. The first 3 years represent the development period of the trees. In the fourth year, canopy closure is expected to occur; modeling continues through the first 3 years of the mature plantation. Monthly estimates of water use by the trees are incorporated. The modeling suggested that the mature trees in the plantation design will provide a large degree of containment of groundwater from the upgradient source areas, despite the seasonal nature of the trees' water consumption. The results indicate the likely areas where seasonal dewatering of the aquifer may limit the availability of water for the trees. The modeling also provided estimates of the residence time of groundwater in the geochemically altered rhizosphere of the plantation.« less

The clonal root system of balsam poplar in upland sites of Quebec and Alberta.

PubMed

Adonsou, Kokouvi E; DesRochers, Annie; Tremblay, Francine; Thomas, Barb R; Isabel, Nathalie

2016-10-01

Balsam poplar seeds are short-lived and require moist seedbeds soon after they are released to germinate. In addition to sexual reproduction, balsam poplar stands can regenerate clonally by root suckering. The origin of stands will in turn affect their genetic structure and root system architecture, which are poorly understood for upland forest stands. Three stands were hydraulically excavated in Quebec (moist) and Alberta (dry) to determine the origin of trees and to characterize root systems with respect to presence of parental roots and root grafts connections. Clones were identified using single-nucleotide polymorphism (SNPs), and all stems, roots and root grafts were aged using dendrochronology techniques. All 82 excavated trees were of sucker origin, and four of the six stands contained a single clone. Parental root connections were found between 22% and 25% of excavated trees, and 53% and 48% of trees were linked with a root graft between the same or different clones, in Alberta and Quebec, respectively. Mean distance between trees connected by parental root was significantly lower than the distance between unconnected trees (0.47 ± 0.25 m vs. 3.14 ± 0.15 m and 1.55 ± 0.27 m vs. 4.25 ± 0.13 m) in Alberta and in Quebec, respectively. The excavations also revealed many dead stumps with live roots, maintained through root connections with live trees. This research highlights that balsam poplar growing in upland stands is a clonal species that can maintain relatively high genotypic diversity, with frequent root connections between trees at maturity. Maintaining an extensive root system through root connections increases the chances of a clone surviving when the above ground tree is dead and may also enhance the resilience of balsam poplar stands after disturbance.

Interaction between isoprene and ozone fluxes at ecosystem level in a poplar plantation and its impact at European level

NASA Astrophysics Data System (ADS)

Zenone, T.; Hendriks, C.; Brilli, F.; Gioli, B.; Portillo Estrada, M.; Schaap, M.; Ceulemans, R.

2015-12-01

The emissions of Biogenic volatile organic compounds (BVOCs) from vegetation, mainly in form of isoprenoids, play an important role in the tropospheric ozone (O3) formation. The potential large expansion of isoprene emitter species (e.g. poplar) as biofuels feedstock might impact the ground level O3 formation. Here we report the simultaneous observations, using the eddy covariance (EC) technique, of isoprene, O3 and CO2 fluxes in a short rotation coppice (SRC) of poplar. The impact of current poplar plantations and associated isoprene emissions on ground level ozone concentrations for Europe was evaluated using a chemistry transport model (CTM) LOTOS-EUROS. The isoprene fluxes showed a well-defined seasonal and daily cycle that mirrored with the stomata O3 uptake. The isoprene emission and the stomata O3 uptake showed significant statistical relationship especially at elevated temperature. Isoprene was characterized by a remarkable peak of emissions (e.g. 38 nmol m-2s-1) occurring for few days as a consequence of the rapid variation of the air and surface temperature. During these days the photosynthetic apparatus (i.e. the CO2 fluxes) and transpiration rates did not show significant variation while we did observe a variation of the energy exchange and a reduction of the bowen ratio. The response of isoprene emissions to ambient O3 concentration follows the common form of the hormetic dose-response curve with a considerable reduction of the isoprene emissions at [O3] > 80 ppbv indicating a potential damping effect of the O3 levels on isoprene. Under the current condition the impact of SRC plantations on ozone concentrations / formation is very limited in Europe. Our findings indicate that, even with future scenarios with more SRC, or conventional poplar plantations, the impact on Ozone formation is negligible.

Matching the best viewing angle in depth cameras for biomass estimation based on poplar seedling geometry.

PubMed

Andújar, Dionisio; Fernández-Quintanilla, César; Dorado, José

2015-06-04

In energy crops for biomass production a proper plant structure is important to optimize wood yields. A precise crop characterization in early stages may contribute to the choice of proper cropping techniques. This study assesses the potential of the Microsoft Kinect for Windows v.1 sensor to determine the best viewing angle of the sensor to estimate the plant biomass based on poplar seedling geometry. Kinect Fusion algorithms were used to generate a 3D point cloud from the depth video stream. The sensor was mounted in different positions facing the tree in order to obtain depth (RGB-D) images from different angles. Individuals of two different ages, e.g., one month and one year old, were scanned. Four different viewing angles were compared: top view (0°), 45° downwards view, front view (90°) and ground upwards view (-45°). The ground-truth used to validate the sensor readings consisted of a destructive sampling in which the height, leaf area and biomass (dry weight basis) were measured in each individual plant. The depth image models agreed well with 45°, 90° and -45° measurements in one-year poplar trees. Good correlations (0.88 to 0.92) between dry biomass and the area measured with the Kinect were found. In addition, plant height was accurately estimated with a few centimeters error. The comparison between different viewing angles revealed that top views showed poorer results due to the fact the top leaves occluded the rest of the tree. However, the other views led to good results. Conversely, small poplars showed better correlations with actual parameters from the top view (0°). Therefore, although the Microsoft Kinect for Windows v.1 sensor provides good opportunities for biomass estimation, the viewing angle must be chosen taking into account the developmental stage of the crop and the desired parameters. The results of this study indicate that Kinect is a promising tool for a rapid canopy characterization, i.e., for estimating crop biomass production, with several important advantages: low cost, low power needs and a high frame rate (frames per second) when dynamic measurements are required.

Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment

PubMed Central

Wong, Mabel T.; Wang, Weijun; Couturier, Marie; Razeq, Fakhria M.; Lombard, Vincent; Lapebie, Pascal; Edwards, Elizabeth A.; Terrapon, Nicolas; Henrissat, Bernard; Master, Emma R.

2017-01-01

To identify carbohydrate-active enzymes (CAZymes) that might be particularly relevant for wood fiber processing, we performed a comparative metagenomic analysis of digestive systems from Canadian beaver (Castor canadensis) and North American moose (Alces americanus) following 3 years of enrichment on either microcrystalline cellulose or poplar hydrolysate. In total, 9,386 genes encoding CAZymes and carbohydrate-binding modules (CBMs) were identified, with up to half predicted to originate from Firmicutes, Bacteroidetes, Chloroflexi, and Proteobacteria phyla, and up to 17% from unknown phyla. Both PCA and hierarchical cluster analysis distinguished the annotated glycoside hydrolase (GH) distributions identified herein, from those previously reported for grass-feeding mammals and herbivorous foragers. The CAZyme profile of moose rumen enrichments also differed from a recently reported moose rumen metagenome, most notably by the absence of GH13-appended dockerins. Consistent with substrate-driven convergence, CAZyme profiles from both poplar hydrolysate-fed cultures differed from cellulose-fed cultures, most notably by increased numbers of unique sequences belonging to families GH3, GH5, GH43, GH53, and CE1. Moreover, pairwise comparisons of moose rumen enrichments further revealed higher counts of GH127 and CE15 families in cultures fed with poplar hydrolysate. To expand our scope to lesser known carbohydrate-active proteins, we identified and compared multi-domain proteins comprising both a CBM and domain of unknown function (DUF) as well as proteins with unknown function within the 416 predicted polysaccharide utilization loci (PULs). Interestingly, DUF362, identified in iron–sulfur proteins, was consistently appended to CBM9; on the other hand, proteins with unknown function from PULs shared little identity unless from identical PULs. Overall, this study sheds new light on the lignocellulose degrading capabilities of microbes originating from digestive systems of mammals known for fiber-rich diets, and highlights the value of enrichment to select new CAZymes from metagenome sequences for future biochemical characterization. PMID:29326667

Involvement of microRNA-Mediated Gene Expression Regulation in the Pathological Development of Stem Canker Disease in Populus trichocarpa

PubMed Central

Zhao, Jia-Ping; Jiang, Xiao-Ling; Zhang, Bing-Yu; Su, Xiao-Hua

2012-01-01

MicroRNAs (miRNAs), a type of short (21–23 nucleotides), non-coding RNA molecule, mediate repressive gene regulation through RNA silencing at the post-transcriptional level, and play an important role in defense and response to abiotic and biotic stresses. In the present study, Affymetrix® miRNA Array, real-time quantitative PCR (qPCR) for miRNAs and their targets, and miRNA promoter analysis were used to validate the gene expression patterns of miRNAs in Populus trichocarpa plantlets induced with the poplar stem canker pathogen, Botryosphaeria dothidea. Twelve miRNAs (miR156, miR159, miR160, miR164, miR166, miR168, miR172, miR319, miR398, miR408, miR1448, and miR1450) were upregulated in the stem bark of P. trichocarpa, but no downregulated miRNAs were found. Based on analysis of the miRNAs and their targets, a potential co-regulatory network was developed to describe post-transcriptional regulation in the pathological development of poplar stem canker. There was highly complex cross-talk between diverse miRNA pathway responses to biotic and abiotic stresses. The results suggest that miR156 is probably an integral component of the miRNA response to all environmental stresses in plants. Cis-regulatory elements were binding sites for the transcription factors (TFs) on DNA. Promoter analysis revealed that TC-rich repeats and a W1-box motif were both tightly related disease response motifs in Populus. Promoter analysis and target analysis of miRNAs also revealed that some TFs regulate their activation/repression. Furthermore, a feedback regulatory network in the pathological development of poplar stem canker is provided. The results confirm that miRNA pathways regulate gene expression during the pathological development of plant disease, and provide new insights into understanding the onset and development of poplar stem canker. PMID:23028709

Level of tissue differentiation influences the activation of a heat-inducible flower-specific system for genetic containment in poplar (Populus tremula L.).

PubMed

Hoenicka, Hans; Lehnhardt, Denise; Nunna, Suneetha; Reinhardt, Richard; Jeltsch, Albert; Briones, Valentina; Fladung, Matthias

2016-02-01

Differentiation level but not transgene copy number influenced activation of a gene containment system in poplar. Heat treatments promoted CRE gene body methylation. The flower-specific transgene deletion was confirmed. Gene flow between genetic modified trees and their wild relatives is still motive of concern. Therefore, approaches for gene containment are required. In this study, we designed a novel strategy for achieving an inducible and flower-specific transgene removal from poplar trees but still expressing the transgene in the plant body. Hence, pollen carrying transgenes could be used for breeding purposes under controlled conditions in a first phase, and in the second phase genetic modified poplars developing transgene-free pollen grains could be released. This approach is based on the recombination systems CRE/loxP and FLP/frt. Both gene constructs contained a heat-inducible CRE/loxP-based spacer sequence for in vivo assembling of the flower-specific FLP/frt system. This allowed inducible activation of gene containment. The FLP/frt system was under the regulation of a flower-specific promoter, either CGPDHC or PTD. Our results confirmed complete CRE/loxP-based in vivo assembling of the flower-specific transgene excision system after heat treatment in all cells for up to 30 % of regenerants derived from undifferentiated tissue cultures. Degradation of HSP::CRE/loxP spacer after recombination but also persistence as extrachromosomal DNA circles were detected in sub-lines obtained after heat treatments. Furthermore, heat treatment promoted methylation of the CRE gene body. A lower methylation level was detected at CpG sites in transgenic sub-lines showing complete CRE/loxP recombination and persistence of CRE/loxP spacer, compared to sub-lines with incomplete recombination. However, our results suggest that low methylation might be necessary but not sufficient for recombination. The flower-specific FLP/frt-based transgene deletion was confirmed in 6.3 % of flowers.

PAD4, LSD1 and EDS1 regulate drought tolerance, plant biomass production, and cell wall properties.

PubMed

Szechyńska-Hebda, Magdalena; Czarnocka, Weronika; Hebda, Marek; Bernacki, Maciej J; Karpiński, Stanisław

2016-03-01

Arabidopsis and poplar with modified PAD4, LSD1 and EDS1 genes exhibit successful growth under drought stress. The acclimatory strategies depend on cell division/cell death control and altered cell wall composition. The increase of plant tolerance towards environmental stresses would open much opportunity for successful plant cultivation in these areas that were previously considered as ineligible, e.g. in areas with poor irrigation. In this study, we performed functional analysis of proteins encoded by PHYTOALEXIN DEFICIENT 4 (PAD4), LESION SIMULATING DISEASE 1 (LSD1) and ENHANCED DISEASE SUSCEPTIBILITY 1 (EDS1) genes to explain their role in drought tolerance and biomass production in two different species: Arabidopsis thaliana and Populus tremula × tremuloides. Arabidopsis mutants pad4-5, lsd1-1, eds1-1 and transgenic poplar lines PAD4-RNAi, LSD1-RNAi and ESD1-RNAi were examined in terms of different morphological and physiological parameters. Our experiments proved that Arabidopsis PAD4, LSD1 and EDS1 play an important role in survival under drought stress and regulate plant vegetative and generative growth. Biomass production and acclimatory strategies in poplar were also orchestrated via a genetic system of PAD4 and LSD1 which balanced the cell division and cell death processes. Furthermore, improved rate of cell division/cell differentiation and altered physical properties of poplar wood were the outcome of PAD4- and LSD1-dependent changes in cell wall structure and composition. Our results demonstrate that PAD4, LSD1 and EDS1 constitute a molecular hub, which integrates plant responses to water stress, vegetative biomass production and generative development. The applicable goal of our research was to generate transgenic plants with regulatory mechanism that perceives stress signals to optimize plant growth and biomass production in semi-stress field conditions.

Northeast Artificial Intelligence Consortium (NAIC). Volume 9. A Planner System for the Application of Indications and Warning

DTIC Science & Technology

1990-12-01

personality of other cognitive entities in the world. POPLAR is a step towards an AI system whose behavior is psychologically justified and can provide the...natural language capability (i.e. the ver- bal behavior of 1) and 5) are not addressed). Nor do we tackle in any complete ard principled manner the...human cognitive behavior . This property makes POPLAR 1.3 personality-oriented, i.e. provision is made in the present model for introducing personality

Dimension Yields from Yellow-Poplar Lumber.

DTIC Science & Technology

1984-06-01

the poor SP Split (includes end checks longer face and then on the good face. than 4 in.) - - The boards and each of their SW Sapwood + + defects were...Cutting Size Random SA = surface area of cutting width Adjustment Adjusted Y-ekd in square inches Length Width reading reading Using the previous...cutting sizes from 4 4 surface area of a 57- by 4-inch FAS yellow-poplar lumber cutting is 1.583 square feet: 3551.58 = 224 cuttings per 1.000 Cutting

Effect of acid mist and air pollutants on yellow-poplar seedling height and leaf growth

Treesearch

Leon S. Dochinger; Keith F. Jensen; Keith F. Jensen

1985-01-01

One-year-old yellow-poplar seedlings were treated with acid mist at pH 2.5, 3.5, 4.5, and 5.5 either alone or in combination with 0.1 ppm 03, S02, and NO2 or NO2 plus S02. After 4 and 8 weeks of treatment, height, leaf area, and leaf and new shoot weight were determined and growth analysis variables calculated. Height, leaf area, and dry weight decreased with...

Draft Genome Sequence of Acinetobacter oleivorans PF1, a Diesel-Degrading and Plant-Growth-Promoting Endophytic Strain Isolated from Poplar Trees Growing on a Diesel-Contaminated Plume.

PubMed

Gkorezis, Panagiotis; Rineau, Francois; Van Hamme, Jonathan; Franzetti, Andrea; Daghio, Matteo; Thijs, Sofie; Weyens, Nele; Vangronsveld, Jaco

2015-02-05

We report the 3.7-Mb draft genome of Acinetobacter oleivorans strain PF1, a hydrocarbonoclastic Gram-negative bacterium in the class Gammaproteobacteria, isolated from poplar trees growing on a diesel-contaminated plume at the Ford Motor Company site in Genk, Belgium. Strain PF1 is a potent plant-growth promoter, useful for diesel fuel phytoremediation applications. Copyright © 2015 Gkorezis et al.

Genetic architecture of spring and autumn phenology in Salix

PubMed Central

2014-01-01

Background In woody plants from temperate regions, adaptation to the local climate results in annual cycles of growth and dormancy, and optimal regulation of these cycles are critical for growth, long-term survival, and competitive success. In this study we have investigated the genetic background to growth phenology in a Salix pedigree by assessing genetic and phenotypic variation in growth cessation, leaf senescence and bud burst in different years and environments. A previously constructed linkage map using the same pedigree and anchored to the annotated genome of P. trichocarpa was improved in target regions and used for QTL analysis of the traits. The major aims in this study were to map QTLs for phenology traits in Salix, and to identify candidate genes in QTL hot spots through comparative mapping with the closely related Populus trichocarpa. Results All traits varied significantly among genotypes and the broad-sense heritabilities ranged between 0.5 and 0.9, with the highest for leaf senescence. In total across experiment and years, 80 QTLs were detected. For individual traits, the QTLs explained together from 21.5 to 56.5% of the variation. Generally each individual QTL explained a low amount of the variation but three QTLs explained above 15% of the variation with one QTL for leaf senescence explaining 34% of the variation. The majority of the QTLs were recurrently identified across traits, years and environments. Two hotspots were identified on linkage group (LG) II and X where narrow QTLs for all traits co-localized. Conclusions This study provides the most detailed analysis of QTL detection for phenology in Salix conducted so far. Several hotspot regions were found where QTLs for different traits and QTLs for the same trait but identified during different years co-localised. Many QTLs co-localised with QTLs found in poplar for similar traits that could indicate common pathways for these traits in Salicaceae. This study is an important first step in identifying QTLs and candidate genes for phenology traits in Salix. PMID:24438179

Differentiation of Populus species using chloroplast single nucleotide polymorphism (SNP) markers--essential for comprehensible and reliable poplar breeding.

PubMed

Schroeder, H; Hoeltken, A M; Fladung, M

2012-03-01

Within the genus Populus several species belonging to different sections are cross-compatible. Hence, high numbers of interspecies hybrids occur naturally and, additionally, have been artificially produced in huge breeding programmes during the last 100 years. Therefore, determination of a single poplar species, used for the production of 'multi-species hybrids' is often difficult, and represents a great challenge for the use of molecular markers in species identification. Within this study, over 20 chloroplast regions, both intergenic spacers and coding regions, have been tested for their ability to differentiate different poplar species using 23 already published barcoding primer combinations and 17 newly designed primer combinations. About half of the published barcoding primers yielded amplification products, whereas the new primers designed on the basis of the total sequenced cpDNA genome of Populus trichocarpa Torr. & Gray yielded much higher amplification success. Intergenic spacers were found to be more variable than coding regions within the genus Populus. The highest discrimination power of Populus species was found in the combination of two intergenic spacers (trnG-psbK, psbK-psbl) and the coding region rpoC. In barcoding projects, the coding regions matK and rbcL are often recommended, but within the genus Populus they only show moderate variability and are not efficient in species discrimination. © 2011 German Botanical Society and The Royal Botanical Society of the Netherlands.

Exogenous abscisic acid alleviates zinc uptake and accumulation in Populus × canescens exposed to excess zinc.

PubMed

Shi, Wen-Guang; Li, Hong; Liu, Tong-Xian; Polle, Andrea; Peng, Chang-Hui; Luo, Zhi-Bin

2015-01-01

A greenhouse experiment was conducted to study whether exogenous abscisic acid (ABA) mediates the responses of poplars to excess zinc (Zn). Populus × canescens seedlings were treated with either basal or excess Zn levels and either 0 or 10 μm ABA. Excess Zn led to reduced photosynthetic rates, increased Zn accumulation, induced foliar ABA and salicylic acid (SA), decreased foliar gibberellin (GA3 ) and auxin (IAA), elevated root H2 O2 levels, and increased root ratios of glutathione (GSH) to GSSG and foliar ratios of ascorbate (ASC) to dehydroascorbate (DHA) in poplars. While exogenous ABA decreased foliar Zn concentrations with 7 d treatments, it increased levels of endogenous ABA, GA3 and SA in roots, and resulted in highly increased foliar ASC accumulation and ratios of ASC to DHA. The transcript levels of several genes involved in Zn uptake and detoxification, such as yellow stripe-like family protein 2 (YSL2) and plant cadmium resistance protein 2 (PCR2), were enhanced in poplar roots by excess Zn but repressed by exogenous ABA application. These results suggest that exogenous ABA can decrease Zn concentrations in P. × canescens under excess Zn for 7 d, likely by modulating the transcript levels of key genes involved in Zn uptake and detoxification. © 2014 John Wiley & Sons Ltd.

Phytotoxicity and uptake of nanoscale zero-valent iron (nZVI) by two plant species.

PubMed

Ma, Xingmao; Gurung, Arun; Deng, Yang

2013-01-15

Use of nano-scale zero valent iron (nZVI) for the treatment of various environmental pollutants has been proven successful. However, large scale introduction of engineered nanomaterials such as nZVI into the environment has recently attracted serious concerns. There is an urgent need to investigate the environmental fate and impact of nZVI due to the scope of its application. The goal of this study was to evaluate the toxicity and accumulation of bare nZVI by two commonly encountered plant species: cattail (Typha latifolia) and hybrid poplars (Populous deltoids×Populous nigra). Plant seedlings were grown hydroponically in a greenhouse and dosed with different concentrations of nZVI (0-1000 mg/L) for four weeks. The nZVI exhibited strong toxic effect on Typha at higher concentrations (>200 mg/L) but enhanced plant growth at lower concentrations. nZVI also significantly reduced the transpiration and growth of hybrid poplars at higher concentrations. Microscopic images indicated that large amount of nZVI coated on plant root surface as irregular aggregates and some nZVI penetrated into several layers of epidermal cells. Transmission electron microscope (TEM) and scanning transmission electron microscope (STEM) confirmed the internalization of nZVI by poplar root cells but similar internalization was not observed for Typha root cells. The upward transport to shoots was minimal for both plant species. Copyright © 2012 Elsevier B.V. All rights reserved.

Long-term biomonitoring of soil contamination using poplar trees: accumulation of trace elements in leaves and fruits.

PubMed

Madejón, P; Ciadamidaro, L; Marañón, T; Murillo, J M

2013-01-01

Phytostabilization aims to immobilize soil contaminants using higher plants. The accumulation of trace elements in Populus alba leaves was monitored for 12 years after a mine spill. Concentrations of As and Pb significantly decreased, while concentrations of Cd and Zn did not significantly over time. Soil concentrations extracted by CaCl2 were measured by ICP-OES and results of As and Pb were below the detection limit. Long-term biomonitoring of soil contamination using poplar leaves was proven to be better suited for the study of trace elements. Plants suitable for phytostabilization must also be able to survive and reproduce in contaminated soils. Concentrations of trace elements were also measured in P. alba fruiting catkins to determine the effect on its reproduction potential. Cadmium and Zn were found to accumulate in fruiting catkins, with the transfer coefficient for Cd significantly greater than Zn. It is possible for trace elements to translocate to seed, which presents a concern for seed germination, establishment and colonization. We conclude that white poplar is a suitable tree for long-term monitoring of soil contaminated with Cd and Zn, and for phytostabilization in riparian habitats, although some caution should be taken with the possible effects on the food web. Supplemental materials are available for this article. Go to the publisher's online edition of International Journal of Phytoremediation to view the supplemental file.

Phytoextraction of risk elements by willow and poplar trees.

PubMed

Kacálková, Lada; Tlustoš, Pavel; Száková, Jiřina

2015-01-01

To characterize the phytoextraction efficiency of two clones of willow trees (Salix x smithiana Willd., Salix rubens) and two clones of poplar trees (Populus nigra x maximowiczii, Populus nigra Wolterson) were planted in contaminated soil (0.4-2.0 mg Cd.kg(-1), 78-313 mg Zn.kg(-1), 21.3-118 mg Cu.kg(-1)). Field experiment was carried out in Czech Republic. The study investigated their ability to accumulate heavy metals (Cd, Zn, and Cu) in harvestable plant parts. The poplars produced higher amount of biomass than willows. Both Salix clones accumulated higher amount of Cd, Zn and Cu in their biomass (maximum 6.8 mg Cd.kg(-1), 909 mg Zn.kg(-1), and 17.7 mg Cu.kg(-1)) compared to Populus clones (maximum 2.06 mg Cd.kg(-1), 463 mg Zn.kg(-1), and 11.8 mg Cu.kg(-1)). There were no significant differences between clones of individual species. BCs for Cd and Zn were greater than 1 (the highest in willow leaves). BCs values of Cu were very low. These results indicate that Salix is more suitable plant for phytoextraction of Cd and Zn than Populus. The Cu phytoextraction potential of Salix and Populus trees was not confirmed in this experiment due to low soil availability of this element.

Cellulose and lignin biosynthesis is altered by ozone in wood of hybrid poplar (Populus tremula×alba)

PubMed Central

Richet, Nicolas; Afif, Dany; Huber, Françoise; Pollet, Brigitte; Banvoy, Jacques; El Zein, Rana; Lapierre, Catherine; Dizengremel, Pierre; Perré, Patrick; Cabané, Mireille

2011-01-01

Wood formation in trees is a dynamic process that is strongly affected by environmental factors. However, the impact of ozone on wood is poorly documented. The objective of this study was to assess the effects of ozone on wood formation by focusing on the two major wood components, cellulose and lignin, and analysing any anatomical modifications. Young hybrid poplars (Populus tremula×alba) were cultivated under different ozone concentrations (50, 100, 200, and 300 nl l−1). As upright poplars usually develop tension wood in a non-set pattern, the trees were bent in order to induce tension wood formation on the upper side of the stem and normal or opposite wood on the lower side. Biosynthesis of cellulose and lignin (enzymes and RNA levels), together with cambial growth, decreased in response to ozone exposure. The cellulose to lignin ratio was reduced, suggesting that cellulose biosynthesis was more affected than that of lignin. Tension wood was generally more altered than opposite wood, especially at the anatomical level. Tension wood may be more susceptible to reduced carbon allocation to the stems under ozone exposure. These results suggested a coordinated regulation of cellulose and lignin deposition to sustain mechanical strength under ozone. The modifications of the cellulose to lignin ratio and wood anatomy could allow the tree to maintain radial growth while minimizing carbon cost. PMID:21357770

Wood species affect the degradation of crude oil in beach sand.

PubMed

Jandl, Gerald; Rodríguez Arranz, Alberto; Baum, Christel; Leinweber, Peter

2015-01-01

The addition of wood chips as a co-substrate can promote the degradation of oil in soil. Therefore, in the present study, the tree species-specific impact of wood chips of Scots pine (Pinus sylvestris L.), Norway spruce (Picea abies L.) and Western balsam poplar (Populus trichocarpa L.) on the degradation of crude oil was tested in beach sand in a 4-week incubation experiment. The CO2-C release increased in the order of control without wood chips < +spruce < +pine < +poplar. Initial and final hydrocarbon concentrations (C10 to C40), as indicators for the oil degradation, were determined with gas chromatography-flame ionization detection (GC-FID). The degradation increased for the light fraction (C10 to C22), the heavy fraction (C23 to C40) as well as the whole range (C10 to C40) in the order of control without wood chips (f(degrad.) = 23% vs. 0% vs. 12%) < +poplar (f(degrad.) = 49% vs. 19% vs. 36%) < +spruce (f(degrad.) = 55% vs. 34% vs. 46%) < +pine (f(degrad.) = 60% vs. 44% vs. 53%), whereas the heavy fraction was less degraded in comparison to the light fraction. It can be concluded, that the tree species-specific wood quality is a significant control of the impact on the degradation of hydrocarbons, and pine wood chips might be promising, possibly caused by their lower decomposability and lower substrate replacement than the other wood species.