Helicon normal modes in Proto-MPEX
NASA Astrophysics Data System (ADS)
Piotrowicz, P. A.; Caneses, J. F.; Green, D. L.; Goulding, R. H.; Lau, C.; Caughman, J. B. O.; Rapp, J.; Ruzic, D. N.
2018-05-01
The Proto-MPEX helicon source has been operating in a high electron density ‘helicon-mode’. Establishing plasma densities and magnetic field strengths under the antenna that allow for the formation of normal modes of the fast-wave are believed to be responsible for the ‘helicon-mode’. A 2D finite-element full-wave model of the helicon antenna on Proto-MPEX is used to identify the fast-wave normal modes responsible for the steady-state electron density profile produced by the source. We also show through the simulation that in the regions of operation in which core power deposition is maximum the slow-wave does not deposit significant power besides directly under the antenna. In the case of a simulation where a normal mode is not excited significant edge power is deposited in the mirror region. ).
Helicon normal modes in Proto-MPEX
DOE Office of Scientific and Technical Information (OSTI.GOV)
Piotrowicz, Pawel A.; Caneses, Juan F.; Green, David L.
Here, the Proto-MPEX helicon source has been operating in a high electron density 'helicon-mode'. Establishing plasma densities and magnetic field strengths under the antenna that allow for the formation of normal modes of the fast-wave are believed to be responsible for the 'helicon-mode'. A 2D finite-element full-wave model of the helicon antenna on Proto-MPEX is used to identify the fast-wave normal modes responsible for the steady-state electron density profile produced by the source. We also show through the simulation that in the regions of operation in which core power deposition is maximum the slow-wave does not deposit significant power besidesmore » directly under the antenna. In the case of a simulation where a normal mode is not excited significant edge power is deposited in the mirror region.« less
Helicon normal modes in Proto-MPEX
Piotrowicz, Pawel A.; Caneses, Juan F.; Green, David L.; ...
2018-05-22
Here, the Proto-MPEX helicon source has been operating in a high electron density 'helicon-mode'. Establishing plasma densities and magnetic field strengths under the antenna that allow for the formation of normal modes of the fast-wave are believed to be responsible for the 'helicon-mode'. A 2D finite-element full-wave model of the helicon antenna on Proto-MPEX is used to identify the fast-wave normal modes responsible for the steady-state electron density profile produced by the source. We also show through the simulation that in the regions of operation in which core power deposition is maximum the slow-wave does not deposit significant power besidesmore » directly under the antenna. In the case of a simulation where a normal mode is not excited significant edge power is deposited in the mirror region.« less
2D Measurements of the Balmer Series in Proto-MPEX using a Fast Visible Camera Setup
NASA Astrophysics Data System (ADS)
Lindquist, Elizabeth G.; Biewer, Theodore M.; Ray, Holly B.
2017-10-01
The Prototype Material Plasma Exposure eXperiment (Proto-MPEX) is a linear plasma device with densities up to 1020 m-3 and temperatures up to 20 eV. Broadband spectral measurements show the visible emission spectra are solely due to the Balmer lines of deuterium. Monochromatic and RGB color Sanstreak SC1 Edgertronic fast visible cameras capture high speed video of plasmas in Proto-MPEX. The color camera is equipped with a long pass 450 nm filter and an internal Bayer filter to view the Dα line at 656 nm on the red channel and the Dβ line at 486 nm on the blue channel. The monochromatic camera has a 434 nm narrow bandpass filter to view the Dγ intensity. In the setup, a 50/50 beam splitter is used so both cameras image the same region of the plasma discharge. Camera images were aligned to each other by viewing a grid ensuring 1 pixel registration between the two cameras. A uniform intensity calibrated white light source was used to perform a pixel-to-pixel relative and an absolute intensity calibration for both cameras. Python scripts that combined the dual camera data, rendering the Dα, Dβ, and Dγ intensity ratios. Observations from Proto-MPEX discharges will be presented. This work was supported by the US. D.O.E. contract DE-AC05-00OR22725.
Some engineering aspects of the Nicholson-Koch mobile chipper
Donald L. Sirois
1981-01-01
A proto-type mobile chip harvester has been designed to harvest forest biomass in the form of logging residuals for use as energy wood. The proto-type is presently undergoing developmental tests. Results are encouraging, indicating mechanical feasibility with prospects of working systems within the next several years.
NASA Astrophysics Data System (ADS)
Farries, Mark; Ward, Jon; Valle, Stefano; Stephens, Gary; Moselund, Peter; van der Zanden, Koen; Napier, Bruce
2015-06-01
Mid-IR imaging spectroscopy has the potential to offer an effective tool for early cancer diagnosis. Current development of bright super-continuum sources, narrow band acousto-optic tunable filters and fast cameras have made feasible a system that can be used for fast diagnosis of cancer in vivo at point of care. The performance of a proto system that has been developed under the Minerva project is described.
Visible camera imaging of plasmas in Proto-MPEX
NASA Astrophysics Data System (ADS)
Mosby, R.; Skeen, C.; Biewer, T. M.; Renfro, R.; Ray, H.; Shaw, G. C.
2015-11-01
The prototype Material Plasma Exposure eXperiment (Proto-MPEX) is a linear plasma device being developed at Oak Ridge National Laboratory (ORNL). This machine plans to study plasma-material interaction (PMI) physics relevant to future fusion reactors. Measurements of plasma light emission will be made on Proto-MPEX using fast, visible framing cameras. The cameras utilize a global shutter, which allows a full frame image of the plasma to be captured and compared at multiple times during the plasma discharge. Typical exposure times are ~10-100 microseconds. The cameras are capable of capturing images at up to 18,000 frames per second (fps). However, the frame rate is strongly dependent on the size of the ``region of interest'' that is sampled. The maximum ROI corresponds to the full detector area, of ~1000x1000 pixels. The cameras have an internal gain, which controls the sensitivity of the 10-bit detector. The detector includes a Bayer filter, for ``true-color'' imaging of the plasma emission. This presentation will exmine the optimized camera settings for use on Proto-MPEX. This work was supported by the US. D.O.E. contract DE-AC05-00OR22725.
The Crustal Structure And CTBT Monitoring Of India: New Insights From Deep Seismic Profiling
2000-09-01
transitional type crust as a major source of Deccan trap flows. The Narmada-Son lineament is the most conspicuous linear geological feature in the... Deccan proto-continents) buckling of the upper and middle crustal layers of the proto-continents took place, resulting in the western block’s lower...crustal column subducting below the Deccan proto-continents. Thus, the collision process was of such severe magnitude that the impact was seen in both
Formation of a hybrid-type proto-atmosphere on Mars accreting in the solar nebula
NASA Astrophysics Data System (ADS)
Saito, Hiroaki; Kuramoto, Kiyoshi
2018-03-01
Recent studies of the chronology of Martian meteorites suggest that the growth of Mars was almost complete within a few Myr after the birth of the Solar system. During such rapid accretion, proto-Mars likely gravitationally maintained both the solar nebula component and the impact degassing component, containing H2O vapour and reduced gas species, as a proto-atmosphere to be called a hybrid-type proto-atmosphere. Here we numerically analyse the mass and composition of the degassed component and the atmospheric thermal structure sustained by accretional heating. Our results predict that a growing Mars possibly acquired a massive and hot hybrid-type proto-atmosphere with surface pressure and temperature greater than several kbar and 2000 K, respectively, which is sufficient to produce a deep magma ocean. In such a high-temperature and high-pressure environment, a significant amount of H2O, CH4, CO, and H2 is expected to be partitioned into the planetary interior, although this would strongly depend on the dynamics of the magma ocean and mantle solidification. The dissolved H2O may explain the wet Martian mantle implied from basaltic Martian meteorites. Along with the remnant reduced atmosphere after the hydrodynamic atmospheric escape, dissolved reduced gas species may have maintained an earliest Martian surface environment that allowed prebiotic chemical evolution and liquid H2O activities.
Run-Time Support for Rapid Prototyping
1988-12-01
prototyping. One such system is the Computer-Aided Proto- typing System (CAPS). It combines rapid prototypng with automatic program generation. Some of the...a design database, and a design management system [Ref. 3:p. 66. By using both rapid prototyping and automatic program genera- tion. CAPS will be...Most proto- typing systems perform these functions. CAPS is different in that it combines rapid prototyping with a variant of automatic program
Proto-Algonquian Verb Inflection.
ERIC Educational Resources Information Center
Proulx, Paul
1990-01-01
Proto-Algonquian had six or seven orders (morphological types) of verbs. The potential order had three modes, the subordinative two, and by one interpretation, the conjunct had four. By another, all conjuncts are participles in the protolanguage. Evidentials include an attestive suppositive dubitative, and perhaps a recollective. Only a few…
NASA Astrophysics Data System (ADS)
Jung, H.; Park, M.
2017-12-01
Large-scale emplaced peridotite bodies may provide insights into plastic deformation process and tectonic evolution in the mantle shear zone. Due to the complexity of deformation microstructures and processes in natural mantle rocks, the evolution of pre-existing olivine fabrics is still not well understood. In this study, we examine well-preserved transitional characteristics of microstructures and olivine fabrics developed in a mantle shear zone from the Yugu peridotite body, the Gyeonggi Massif, Korean Peninsula. The Yugu peridotite body predominantly comprises spinel harzburgite together with minor lherzolite, dunite, and clinopyroxenite. We classified highly deformed peridotites into four textural types based on their microstructural characteristics: proto-mylonite; proto-mylonite to mylonite transition; mylonite; and ultra-mylonite. Olivine fabrics changed from A-type (proto-mylonite) via D-type (mylonite) to E-type (ultra-mylonite). Olivine fabric transition is interpreted as occurring under hydrous conditions at low temperature and high strain, because of characteristics such as Ti-clinohumite defects (and serpentine) and fluid inclusion trails in olivine, and a hydrous mineral (pargasite) in the matrix, especially in the ultra-mylonitic peridotites. Even though the ultra-mylonitic peridotites contained extremely small (24-30 μm) olivine neoblasts, the olivine fabrics showed a distinct (E-type) pattern rather than a random one. Analysis of the lattice preferred orientation strength, dislocation microstructures, recrystallized grain-size, and deformation mechanism maps of olivine suggest that the proto-mylonitic, mylonitic, and ultra-mylonitic peridotites were deformed by dislocation creep (A-type), DisGBS (D-type), and combination of dislocation and diffusion creep (E-type), respectively.
Paleoneurosurgical aspects of Proto-Bulgarian artificial skull deformations.
Enchev, Yavor; Nedelkov, Grigoriy; Atanassova-Timeva, Nadezhda; Jordanov, Jordan
2010-12-01
Paleoneurosurgery represents a comparatively new developing direction of neurosurgery dealing with archaeological skull and spine finds and studying their neurosurgical aspects. Artificial skull deformation, as a bone artifact, naturally has been one of the main paleoneurosurgical research topics. Traditionally, the relevant neurosurgical literature has analyzed in detail the intentional skull deformations in South America's tribes. However, little is known about the artificial skull deformations of the Proto-Bulgarians, and what information exists is mostly due to anthropological studies. The Proto-Bulgarians originated from Central Asia, and distributed their skull deformation ritual on the Balkan Peninsula by their migration and domination. Proto-Bulgarian artificial skull deformation was an erect or oblique form of the anular type, and was achieved by 1 or 2 pressure bandages that were tightened around a newborn's head for a sufficiently long period. The intentional skull deformation in Proto-Bulgarians was not associated with neurological deficits and/or mental retardation. No indirect signs of chronic elevated intracranial pressure were found on the 3D CT reconstruction of the artificially deformed skulls.
Piotrowska, Katarzyna; Tarnowski, Maciej; Zgutka, Katarzyna; Pawlik, Andrzej
2016-03-19
Intermittent fasting decreases glucose and insulin levels and increases insulin sensitivity and lifespan. Decreased food intake influences the liver. Previous studies have shown gender differences in response to various types of caloric restriction, including every-other-day (EOD) feeding, in humans and rodents. Our goal was to show the influence of prolonged EOD feeding on the morphology, proliferation and apoptosis of livers from male and female mice. After nine months of an EOD diet, the livers from male and female mice were collected. We examined their morphology on histological slides using the Hematoxilin and Eosine (H_E) method and Hoechst staining of cell nuclei to evaluate the nuclear area of hepatocytes. We also evaluated the expression of mRNA for proto-oncogens, pro-survival proteins and apoptotic markers using Real Time Polimerase Chain Reaction (PCR). We noted increased lipid content in the livers of EOD fed female mice. EOD feeding lead to a decrease of proliferation and apoptosis in the livers of female and male mice, which suggest that tissue maintenance occurred during EOD feeding. Our experiment revealed sex-specific expression of mRNA for proto-oncogenes and pro-survival and pro-apoptotic genes in mice as well as sex-specific responses to the EOD treatment.
Rotational stellar structures based on the Lagrangian variational principle
NASA Astrophysics Data System (ADS)
Yasutake, Nobutoshi; Fujisawa, Kotaro; Yamada, Shoichi
2017-06-01
A new method for multi-dimensional stellar structures is proposed in this study. As for stellar evolution calculations, the Heney method is the defacto standard now, but basically assumed to be spherical symmetric. It is one of the difficulties for deformed stellar-evolution calculations to trace the potentially complex movements of each fluid element. On the other hand, our new method is very suitable to follow such movements, since it is based on the Lagrange coordinate. This scheme is also based on the variational principle, which is adopted to the studies for the pasta structures inside of neutron stars. Our scheme could be a major break through for evolution calculations of any types of deformed stars: proto-planets, proto-stars, and proto-neutron stars, etc.
Occurrence of phaeochromocytoma tumours in RET mutation carriers - a single-centre study.
Kotecka-Blicharz, Agnieszka; Hasse-Lazar, Kornelia; Jurecka-Lubieniecka, Beata; Pawlaczek, Agnieszka; Oczko-Wojciechowska, Małgorzata; Bugajska, Beata; Ledwon, Aleksandra; Król, Aleksandra; Michalik, Barbara; Jarząb, Barbara
2016-01-01
Multiple endocrine neoplasia type 2 (MEN 2) is an autosomal dominant genetic syndrome caused by germline mutation in RET proto-oncogene. The most common mutations are in a cysteine rich domain. Phaeochromocytoma will develop in approximately 50% of RET proto-oncogene carriers. The studied population consisted of 228 RET proto-oncogene mutation carriers. Monitoring for the diagnosis of phaeochromocytoma was carried out in all patients with established genetic status. Mean time of follow up was 138 months. Surveillance consisted of periodically performed clinical evaluation, 24-hour urinary determinations of total metanephrines complementary with imaging (CT, MR, MIBG scintigraphy). Phaeochromocytoma developed in 41 patients (18% of all RET proto-oncogene mutations carriers). The mean age of diagnosis for the whole cohort was 43 years. In eight cases phaeochromocytoma was the first manifestation of the MEN 2 syndrome. Only eight (20%) patients were symptomatic at diagnosis of phaeochromocytoma. The mean size of the tumour was 4.3 cm. There was no extra-adrenal localisation. We observed one case of malignant phaeochromocytoma. In patients with MEN 2 syndrome phaeochromocytomas are usually benign adrenal tumours with high risk of bilateral development. Taking to account the latter risk and non-specific clinical manifestation of the neoplasm it is mandatory to screen all RET proto-oncogene mutations carriers for phaeochromocytoma.
Overview of diagnostic implementation on Proto-MPEX at ORNL
NASA Astrophysics Data System (ADS)
Biewer, T. M.; Bigelow, T.; Caughman, J. B. O.; Fehling, D.; Goulding, R. H.; Gray, T. K.; Isler, R. C.; Martin, E. H.; Meitner, S.; Rapp, J.; Unterberg, E. A.; Dhaliwal, R. S.; Donovan, D.; Kafle, N.; Ray, H.; Shaw, G. C.; Showers, M.; Mosby, R.; Skeen, C.
2015-11-01
The Prototype Material Plasma Exposure eXperiment (Proto-MPEX) recently began operating with an expanded diagnostic set. Approximately 100 sightlines have been established, delivering the plasma light emission to a ``patch panel'' in the diagnostic room for distribution to a variety of instruments: narrow-band filter spectroscopy, Doppler spectroscopy, laser induced breakdown spectroscopy, optical emission spectroscopy, and Thomson scattering. Additional diagnostic systems include: IR camera imaging, in-vessel thermocouples, ex-vessel fluoroptic probes, fast pressure gauges, visible camera imaging, microwave interferometry, a retarding-field energy analyzer, rf-compensated and ``double'' Langmuir probes, and B-dot probes. A data collection and archival system has been initiated using the MDSplus format. This effort capitalizes on a combination of new and legacy diagnostic hardware at ORNL and was accomplished largely through student labor. This work was supported by the US. D.O.E. contract DE-AC05-00OR22725.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Deptuch, Gregory; Hoff, James; Jindariani, Sergo
Extremely fast pattern recognition capabilities are necessary to find and fit billions of tracks at the hardware trigger level produced every second anticipated at high luminosity LHC (HL-LHC) running conditions. Associative Memory (AM) based approaches for fast pattern recognition have been proposed as a potential solution to the tracking trigger. However, at the HL-LHC, there is much less time available and speed performance must be improved over previous systems while maintaining a comparable number of patterns. The Vertically Integrated Pattern Recognition Associative Memory (VIPRAM) Project aims to achieve the target pattern density and performance goal using 3DIC technology. The firstmore » step taken in the VIPRAM work was the development of a 2D prototype (protoVIPRAM00) in which the associative memory building blocks were designed to be compatible with the 3D integration. In this paper, we present the results from extensive performance studies of the protoVIPRAM00 chip in both realistic HL-LHC and extreme conditions. Results indicate that the chip operates at the design frequency of 100 MHz with perfect correctness in realistic conditions and conclude that the building blocks are ready for 3D stacking. We also present performance boundary characterization of the chip under extreme conditions.« less
Modeling and Theory of RF Antenna Systems on Proto-MPEX
NASA Astrophysics Data System (ADS)
Piotrowicz, P. A.; Caneses, J. F.; Goulding, R. H.; Green, D.; Caughman, J. B. O.; Ruzic, D. N.; Proto-MPEX Team
2017-10-01
The RF wave coupling of the helicon and ICH antennas installed on the Prototype Material Plasma Exposure eXperiment (MPEX) has been explored theoretically and via a full wave model implemented in COMSOL Multiphysics. The high-density mode in Proto-MPEX has been shown to occur when exciting radial eigenmodes of the plasma column which coincides with entering a Trivelpiece Gould (TG) anti-resonant regime, therefore suppressing edge heating in favor of core power deposition. The fast wave launched by the helicon antenna has a large wavelength and travels at a steep group velocity angle with the background magnetic field; for this reason the fast wave launched by the helicon antenna efficiently couples power to the core plasma. However, the ICH heating scheme relies on a small wavelength slow wave to couple power to the core of the plasma column. Coupling slow wave power to the core of the plasma column is sensitive to the location of the Alfven resonance. The wave-vector and group velocity vector of the slow wave in this parameter regime undergoes a drastic change in behavior when approaching the Alfven resonance. Full wave simulation results and dispersion analysis will be presented with suggestions to guide experimental progress. This work was supported by the US. D.O.E. contract DE-AC05-00OR22725.
Evolution of proto-neutron stars with quarks.
Pons, J A; Steiner, A W; Prakash, M; Lattimer, J M
2001-06-04
Neutrino fluxes from proto-neutron stars with and without quarks are studied. Observable differences become apparent after 10-20 s of evolution. Sufficiently massive stars containing negatively charged, strongly interacting, particles collapse to black holes during the first minute of evolution. Since the neutrino flux vanishes when a black hole forms, this is the most obvious signal that quarks (or other types of strange matter) have appeared. The metastability time scales for stars with quarks are intermediate between those containing hyperons and kaon condensates.
The Arduous Journey to Black Hole Formation in Potential Gamma-Ray Burst Progenitors
NASA Astrophysics Data System (ADS)
Dessart, Luc; O'Connor, Evan; Ott, Christian D.
2012-07-01
We present a quantitative study on the properties at death of fast-rotating massive stars evolved at low-metallicity—objects that are proposed as likely progenitors of long-duration γ-ray bursts (LGRBs). We perform one-dimensional+rotation stellar-collapse simulations on the progenitor models of Woosley and Heger, and critically assess their potential for the formation of a black hole and a Keplerian disk (namely, a collapsar) or a proto-magnetar. We note that theoretical uncertainties in the treatment of magnetic fields and the approximate handling of rotation compromise the accuracy of stellar-evolution models. We find that only the fastest rotating progenitors achieve sufficient compactness for black hole formation while the bulk of models possess a core density structure typical of garden-variety core-collapse supernova (SN) progenitors evolved without rotation and at solar metallicity. Of the models that do have sufficient compactness for black hole formation, most of them also retain a large amount of angular momentum in the core, making them prone to a magneto-rotational explosion, therefore preferentially leaving behind a proto-magnetar. A large progenitor angular-momentum budget is often the sole criterion invoked in the community today to assess the suitability for producing a collapsar. This simplification ignores equally important considerations such as the core compactness, which conditions black hole formation, the core angular momentum, which may foster a magneto-rotational explosion preventing black hole formation, or the metallicity and the residual envelope mass which must be compatible with inferences from observed LGRB/SNe. Our study suggests that black hole formation is non-trivial, that there is room for accommodating both collapsars and proto-magnetars as LGRB progenitors, although proto-magnetars seem much more easily produced by current stellar-evolutionary models.
An object-based visual attention model for robotic applications.
Yu, Yuanlong; Mann, George K I; Gosine, Raymond G
2010-10-01
By extending integrated competition hypothesis, this paper presents an object-based visual attention model, which selects one object of interest using low-dimensional features, resulting that visual perception starts from a fast attentional selection procedure. The proposed attention model involves seven modules: learning of object representations stored in a long-term memory (LTM), preattentive processing, top-down biasing, bottom-up competition, mediation between top-down and bottom-up ways, generation of saliency maps, and perceptual completion processing. It works in two phases: learning phase and attending phase. In the learning phase, the corresponding object representation is trained statistically when one object is attended. A dual-coding object representation consisting of local and global codings is proposed. Intensity, color, and orientation features are used to build the local coding, and a contour feature is employed to constitute the global coding. In the attending phase, the model preattentively segments the visual field into discrete proto-objects using Gestalt rules at first. If a task-specific object is given, the model recalls the corresponding representation from LTM and deduces the task-relevant feature(s) to evaluate top-down biases. The mediation between automatic bottom-up competition and conscious top-down biasing is then performed to yield a location-based saliency map. By combination of location-based saliency within each proto-object, the proto-object-based saliency is evaluated. The most salient proto-object is selected for attention, and it is finally put into the perceptual completion processing module to yield a complete object region. This model has been applied into distinct tasks of robots: detection of task-specific stationary and moving objects. Experimental results under different conditions are shown to validate this model.
THE ARDUOUS JOURNEY TO BLACK HOLE FORMATION IN POTENTIAL GAMMA-RAY BURST PROGENITORS
DOE Office of Scientific and Technical Information (OSTI.GOV)
Dessart, Luc; O'Connor, Evan; Ott, Christian D., E-mail: Luc.Dessart@oamp.fr, E-mail: evanoc@tapir.caltech.edu, E-mail: cott@tapir.caltech.edu
2012-07-20
We present a quantitative study on the properties at death of fast-rotating massive stars evolved at low-metallicity-objects that are proposed as likely progenitors of long-duration {gamma}-ray bursts (LGRBs). We perform one-dimensional+rotation stellar-collapse simulations on the progenitor models of Woosley and Heger, and critically assess their potential for the formation of a black hole and a Keplerian disk (namely, a collapsar) or a proto-magnetar. We note that theoretical uncertainties in the treatment of magnetic fields and the approximate handling of rotation compromise the accuracy of stellar-evolution models. We find that only the fastest rotating progenitors achieve sufficient compactness for black holemore » formation while the bulk of models possess a core density structure typical of garden-variety core-collapse supernova (SN) progenitors evolved without rotation and at solar metallicity. Of the models that do have sufficient compactness for black hole formation, most of them also retain a large amount of angular momentum in the core, making them prone to a magneto-rotational explosion, therefore preferentially leaving behind a proto-magnetar. A large progenitor angular-momentum budget is often the sole criterion invoked in the community today to assess the suitability for producing a collapsar. This simplification ignores equally important considerations such as the core compactness, which conditions black hole formation, the core angular momentum, which may foster a magneto-rotational explosion preventing black hole formation, or the metallicity and the residual envelope mass which must be compatible with inferences from observed LGRB/SNe. Our study suggests that black hole formation is non-trivial, that there is room for accommodating both collapsars and proto-magnetars as LGRB progenitors, although proto-magnetars seem much more easily produced by current stellar-evolutionary models.« less
Windscanner: 3-D wind and turbulence measurements from three steerable doppler lidars
NASA Astrophysics Data System (ADS)
Mikkelsen, T.; Mann, J.; Courtney, M.; Sjöholm, M.
2008-05-01
At RISØ DTU we has started to build a new-designed laser-based lidar scanning facility for detailed remote measurements of the wind fields engulfing the huge wind turbines of today. Our aim is to measure in real-time 3D wind vector data at several hundred points every second: 1) upstream of the turbine, 2) near the turbine, and 3) in the wakes of the turbine rotors. Our first proto-type Windscanner is now being built from three commercially available Continuous Wave (CW) wind lidars modified with fast adjustable focus length and equipped with 2-D prism-based scan heads, in conjunction with a commercially available pulsed wind lidar for extended vertical profiling range. Design, construction and initial testing of the new 3-D wind lidar scanning facility are described and the functionality of the Windscanner and its potential as a new research facility within the wind energy community is discussed.
Serpentinization of Olivine by Seawater: A Flow-Through Experiment
NASA Astrophysics Data System (ADS)
Gouze, P.; Luquot, L.; Andreani, M.; Godard, M.; Gibert, B.
2011-12-01
The mantle exposed at slow spreading ridges is pervasively serpentinized, down to ca. 5km according to geophysical data. The onset and durability of this hydration process require efficient penetration and renewal of fluids at the mineral-fluid interface. However, the mechanisms of fluid penetration are still poorly understood. Moreover, serpentinization is exovolumic, if a mass-conservative system is assumed, or chemical elements are leached out to conserve rock volume. Thus, the extent of serpentinization depends of the system capacity to create space and/or to drive mass transfers. In order to investigate these hydrodynamic and chemical mechanisms, we did a laboratory experiment during which seawater was injected in a sintered San Carlos olivine sample at conditions representative of low temperature ultramafic hydrothermal systems. The percolation-reaction experiment was carried out at 19 MPa and 190°C; the initial water flow was set at 0.2 mL/h then decreased down to 0.06 mL/h after 8 days. During the experiment (23 days), permeability decreased continuously. The composition of the outlet fluid varied strongly during the first 24h of the experiment, then reached equilibrium values. The high Si concentrations in outlet fluids indicated steady olivine dissolution, while their low Fe and Mg concentrations suggested precipitation of Fe- and Mg-rich mineral phases. The reacted sample acquired a reddish brown color, indicating oxidation reactions occurred. Optical observation and SEM imaging revealed the presence of a soft white material filling the pores of the reacted sample. It was identified as a poorly crystallized serpentine type material by AEM/TEM analyses. This proto-serpentine is intimately associated to <100 nm Fe-oxide patches (probably hematite) growing on the olivine surface. We interpret the precipitation of this proto-serpentine together with Fe-oxides throughout the sample as marking the early stages of serpentinization. The fluid composition not being modified by changes in fluid flow, we posit that olivine serpentinization is not controlled by elemental transport and/or by chemical kinetics, but takes place at-equilibrium; the reaction velocity is very fast and independent on the changes in the reaction surface area. Indeed, mass balance calculations indicate that more than 15 wt. % olivine was dissolved while the same mass of proto-serpentine was formed; concurrently, porosity decreased from ˜ 12% to 5 %. We infer that the structure of the newly formed proto-serpentine resulted in the clogging of fluid paths and explain the decrease of permeability during experiments. Yet the loose structure of the proto-serpentine allows maintaining a connected pore structure ensuring the perennial renewing (diffusion and/or advection) of the reactants at the reaction surfaces. These experimental results are used to constrain numerical reactive transport models and better understand the scale and efficiency of serpentinization reactions (effective reaction rates in porous/fractured media) at the scale of spreading ridges.
ERIC Educational Resources Information Center
Proulx, Paul
An analysis of pronouns in Proto-Algic, the ancestor of Proto-Algonquian and other languages, revealed that the Proto-Algic demonstrative roots and locatives had three inflectional endings, referring to spatial or temporal distributions of entities, which evolve into the gender systems of Yurok and Algonquian. Proto-Algic had two discourse…
Karga, H J; Karayianni, M K; Linos, D A; Tseleni, S C; Karaiskos, K D; Papapetrou, P D
1998-10-01
The RET proto-oncogene has been identified as the multiple endocrine neoplasia type 2 disease gene. An association between specific RET mutation and disease phenotype has been reported. We present the phenotype-genotype of 12 Greek families with multiple endocrine neoplasia type 2A (MEN 2A) or familial medullary thyroid carcinoma (FMTC). Seventy members were studied and DNA analysis for RET mutations was performed in fifty-eight of them. Exons 10, 11, 13, 14 and 16 of the RET proto-oncogene were analyzed by single strand conformation polymorphism analysis, direct DNA sequencing and/or restriction enzyme analysis. No mutations of the RET proto-oncogene were identified in 1 of 9 families with MEN 2A and in the 3 families with FMTC. In 7 MEN 2A families, the mutation was demonstrated in codon 634 and in 1 family it was demonstrated in codon 620. There was a low frequency, about 8%, of hyperparathyroidism associated with MEN 2A. The specific causative mutations for pararthyroid disease were C634R or C634Y. Among the MEN 2A individuals there was one case with de novo C634R mutation and one case, C634Y, with cutaneous lichen amyloidosis which predated by 24 years the diagnosis of MEN 2A. In 2 children who were MEN 2A gene carriers, microscopic medullary thyroid carcinomas were found. These data show a low frequency of hyperparathyroidism in our cases and provide further evidence that individuals with C634R as well as with C634Y mutations of the RET proto-oncogene could be at risk for parathyroid disease. Cutaneous lichen amyloidosis could be an early feature of MEN 2A. Additionally, direct DNA testing provided an opportunity to resect medullary thyroid carcinoma at an early stage.
NASA Astrophysics Data System (ADS)
Huck, Stefan; Stein, Melody; Adatte, Thierry; Föllmi, Karl B.; Immenhauser, Adrian; Heimhofer, Ulrich
2014-05-01
In the proto-North Atlantic realm (Lusitanian Basin, Portugal), carbonate platform production witnessed a major biotic turnover during the Early Aptian. Here, Urgonian-type rudist-nerinid dominated limestones were replaced by an orbitolinid-rich, oyster and serpulid-bearing marly facies. Integrated biostratigraphic-chemostratigraphic studies (Burla et al., 2008; Huck et al., 2012) provided evidence that this change coincides with the Early Aptian carbonate platform drowning episode in the run-up of oceanic anoxic event (OAE) 1a (transition D. forbesi to D. deshayesi ammonite zones), which has been recorded, from many localities in the Tethyan Ocean (Godet, 2013). Unlike Helvetic and Arabian carbonate platforms, which are characterised by a punctuated mass occurrence of orbitolinids marking the onset of the Aptian (Rawil and Hawar members, respectively), orbitolinids are an abundant constituent of the proto-North Atlantic carbonate platform community from the Late Barremian onwards. Orbitolinid-rich packstones and marls showing mass-occurrences of orbitolinids indicate repeated short-term installation of specific environmental conditions (eutrophication and/or deepening). In order to critically assess the influence of regional palaeoenvironmental against global palaeoclimatic and palaeoceanographic changes on the Proto-North Atlantic carbonate platform evolution, several outcrop successions in the Lusitanian Basin covering the critical interval have been investigated in detail with regard to facies and petrographic characteristics and geochemical (C-/O-isotopes, P content, bulk-rock and clay mineralogy,) inventory. The aims of the present study are three-fold: (1) to characterise proto-North Atlantic Lower Aptian shallow-water carbonates with respect to diagenetic history, microfacies, and distribution of fossils useful for the analysis of palaeoenvironments (corals, rudists and orbitolinids); (2) to evaluate the influence of sea-level and humidity changes (palaeonutrient fluxes) on the carbonate platform ecosystems, with special focus on the transition from Urgonian-type rudist-nerinid towards orbitolinid-oyster-serpulid dominated limestones; and (3) to compare the considered proto-North Atlantic platform evolution with the coeval punctuated carbonate platform breakdown as observed along the Northern Tethyan margin. Burla, S., Heimhofer, U., Hochuli, P.A., Weissert, H., Skelton, P., 2008. Changes in sedimentary patterns of coastal and deep sea successions from the North Atlantic (Portugal) linked to Early Cretaceous environmental change: Palaeogeography, Palaeoclimatology, Palaeoecology 257 (1-2), 38-57. Godet, A., 2013. Drowning unconformities: Palaeoenvironmental significance and involvement of global processes. Sedimentary Geology 293, 45-66. Invited Review Paper. Huck, S., Heimhofer, U., Immenhauser, A., 2012. Early Aptian algal bloom in a neritic proto-North Atlantic setting: Harbinger of global change related to OAE1a? GSA Bulletin 124 (11-12), 1810-1825.
CONSTRAINTS ON THE PHYSICAL PROPERTIES OF MAIN BELT COMET P/2013 R3 FROM ITS BREAKUP EVENT
DOE Office of Scientific and Technical Information (OSTI.GOV)
Hirabayashi, Masatoshi; Sánchez, Diego Paul; Gabriel, Travis
2014-07-01
Jewitt et al. recently reported that main belt comet P/2013 R3 experienced a breakup, probably due to rotational disruption, with its components separating on mutually hyperbolic orbits. We propose a technique for constraining physical properties of the proto-body, especially the initial spin period and cohesive strength, as a function of the body's estimated size and density. The breakup conditions are developed by combining mutual orbit dynamics of the smaller components and the failure condition of the proto-body. Given a proto-body with a bulk density ranging from 1000 kg m{sup –3} to 1500 kg m{sup –3} (a typical range of the bulk density of C-type asteroids),more » we obtain possible values of the cohesive strength (40-210 Pa) and the initial spin state (0.48-1.9 hr). From this result, we conclude that although the proto-body could have been a rubble pile, it was likely spinning beyond its gravitational binding limit and would have needed cohesive strength to hold itself together. Additional observations of P/2013 R3 will enable stronger constraints on this event, and the present technique will be able to give more precise estimates of its internal structure.« less
Stochastic simulations of fatty-acid proto-cell models
NASA Astrophysics Data System (ADS)
Mavelli, F.; Ruiz-Mirazo, K.
2007-06-01
In this contribution we tackle the problem of simulating the time behavior of self-assembling fatty acid vesicles in different experimental conditions. These systems have been (and are being) explored by various labs as possible precursor models of cellular compartments. By means of our recently developed stochastic simulation platform ('ENVIRONMENT') we are able to reproduce quite satisfactorily experimental data that have been reported on the different growth behavior of this type of proto-cellular systems, depending on the level of osmotic pressure they are under. The work here presented is part of a more general attempt to gain insight into the problem of how self-assembling vesicles (closed bilayer structures) could progressively turn into minimal self-producing and self-reproducing cells: i.e., into interesting candidates for (proto-)biological systems. This involves crossing the traditional gap between in silico and in vitro approaches, as we try to do here, convinced that major adavances in the field require the correct integration of both theoretical and experimental endeavors.
Proto-South China Sea plate tectonics using subducted slab constraints from tomography
NASA Astrophysics Data System (ADS)
Wu, J.; Suppe, J.
2017-12-01
The geology of the South China Sea and surrounding margins is intimately tied to the subduction of its predecessor, the proto-South China Sea. However, published plate reconstructions have shown highly variable sizes and locations for the proto-South China Sea. Despite these differences, most studies agree that the proto-South China Sea was subducted southwards under north Borneo in the Cenozoic. Here we present new details on proto-South China Sea paleogeography using mapped and unfolded slabs from seismic tomography following Wu et al. (2016). We show that most of the proto-South China Sea lithosphere lies directly under the South China Sea and is represented by an extensive (>1000 km N-S) swath of detached, sub-horizontal slab at 450 to 700 km depth, here called the `northern Proto-South China Sea'. Furthermore, slab unfolding shows that prior to subduction at the Manila Trench, the eastern limit of the South China Sea, lay directly above the edge of the `northern Proto-South China Sea', both extending 400 to 500 km to the east of the present Manila trench. These observations show that the South China Sea opened directly above a northward-subducting `northern Proto-South China Sea', which runs counter to most proto-South China Sea plate models. We present a slab-constrained plate reconstruction that shows the proto-South China Sea was consumed by double-sided subduction to both the north and south, as follows: [1] The `northern proto-South China Sea' subducted in the Oligocene-Miocene under the Dangerous Grounds and southward expanding South China Sea by in-place 'self subduction' similar to the western Mediterranean basins. [2] Limited southward subduction of the proto-South China Sea under Borneo occurred pre-Oligocene, represented by the 'southern Proto-South China Sea' slab at 800 to 900 km depths. Our plate reconstruction implies the southern South China Sea was an active margin during South China Sea opening and had a south-facing arc and a north-dipping proto-South China Sea slab. A southern South China Sea arc was likely underthrusted under northern Borneo after 15 Ma. Our model also predicts the formation of a mantle wedge under the South China Sea during seafloor spreading. This suggests that South China Sea opening was accompanied by a more vigorous asthenospheric circulation than previously recognized.
NASA Astrophysics Data System (ADS)
Ray, Holly; Biewer, Theodore; Caneses, Juan; Green, Jonathan; Lindquist, Elizabeth; McQuown, Levon; Schmitz, Oliver
2017-10-01
A new helium line-ratio spectral monitoring (HELIOS) diagnostic, using a piezoelectric valve with high duty cycles (on/off times ms), allowing for good background correction, and measured particle flowrates on the order of 1020 particles/second is being implemented on Oak Ridge National Laboratory's (ORNL) Prototype Material Plasma Exposure eXperiment (Proto-MPEX). Built in collaboration with the University of Wisconsin - Madison, the HELIOS diagnostic communicates with a Labview program for controlled bursts of helium into the vessel. The open magnetic geometry of Proto-MPEX is ideal for testing and characterizing a HELIOS diagnostic. The circular cross-section with four ports allows for cross comparison between different diagnostics: 1) Helium injection with the piezoelectric puff valve, 2) HELIOS line-of-sight high-gain observation, 3) scan-able Double Langmuir probe, and 4) HELIOS 2D imaging observation. Electron density and temperature measurements from the various techniques will be compared. This work was supported by the US. D.O.E. contract DE-AC05-00OR22725 and DE-SC00013911.
Modeling visual clutter perception using proto-object segmentation
Yu, Chen-Ping; Samaras, Dimitris; Zelinsky, Gregory J.
2014-01-01
We introduce the proto-object model of visual clutter perception. This unsupervised model segments an image into superpixels, then merges neighboring superpixels that share a common color cluster to obtain proto-objects—defined here as spatially extended regions of coherent features. Clutter is estimated by simply counting the number of proto-objects. We tested this model using 90 images of realistic scenes that were ranked by observers from least to most cluttered. Comparing this behaviorally obtained ranking to a ranking based on the model clutter estimates, we found a significant correlation between the two (Spearman's ρ = 0.814, p < 0.001). We also found that the proto-object model was highly robust to changes in its parameters and was generalizable to unseen images. We compared the proto-object model to six other models of clutter perception and demonstrated that it outperformed each, in some cases dramatically. Importantly, we also showed that the proto-object model was a better predictor of clutter perception than an actual count of the number of objects in the scenes, suggesting that the set size of a scene may be better described by proto-objects than objects. We conclude that the success of the proto-object model is due in part to its use of an intermediate level of visual representation—one between features and objects—and that this is evidence for the potential importance of a proto-object representation in many common visual percepts and tasks. PMID:24904121
Sterpetti, Paola; Hack, Andrew A.; Bashar, Mariam P.; Park, Brian; Cheng, Sou-De; Knoll, Joan H. M.; Urano, Takeshi; Feig, Larry A.; Toksoz, Deniz
1999-01-01
The human lbc oncogene product is a guanine nucleotide exchange factor that specifically activates the Rho small GTP binding protein, thus resulting in biologically active, GTP-bound Rho, which in turn mediates actin cytoskeletal reorganization, gene transcription, and entry into the mitotic S phase. In order to elucidate the mechanism of onco-Lbc transformation, here we report that while proto- and onco-lbc cDNAs encode identical N-terminal dbl oncogene homology (DH) and pleckstrin homology (PH) domains, proto-Lbc encodes a novel C terminus absent in the oncoprotein that includes a predicted α-helical region homologous to cyto-matrix proteins, followed by a proline-rich region. The lbc proto-oncogene maps to chromosome 15, and onco-lbc represents a fusion of the lbc proto-oncogene N terminus with a short, unrelated C-terminal sequence from chromosome 7. Both onco- and proto-Lbc can promote formation of GTP-bound Rho in vivo. Proto-Lbc transforming activity is much reduced compared to that of onco-Lbc, and a significant increase in transforming activity requires truncation of both the α-helical and proline-rich regions in the proto-Lbc C terminus. Deletion of the chromosome 7-derived C terminus of onco-Lbc does not destroy transforming activity, demonstrating that it is loss of the proto-Lbc C terminus, rather than gain of an unrelated C-terminus by onco-Lbc, that confers transforming activity. Mutations of onco-Lbc DH and PH domains demonstrate that both domains are necessary for full transforming activity. The proto-Lbc product localizes to the particulate (membrane) fraction, while the majority of the onco-Lbc product is cytosolic, and mutations of the PH domain do not affect this localization. The proto-Lbc C-terminus alone localizes predominantly to the particulate fraction, indicating that the C terminus may play a major role in the correct subcellular localization of proto-Lbc, thus providing a mechanism for regulating Lbc oncogenic potential. PMID:9891067
Disordered amorphous calcium carbonate from direct precipitation
Farhadi Khouzani, Masoud; Chevrier, Daniel M.; Güttlein, Patricia; ...
2015-06-01
Amorphous calcium carbonate (ACC) is known to play a prominent role in biomineralization. Different studies on the structure of biogenic ACCs have illustrated that they can have distinct short-range orders. However, the origin of so-called proto-structures in synthetic and additive-free ACCs is not well understood. In the current work, ACC has been synthesised in iso-propanolic media by direct precipitation from ionic precursors, and analysed utilising a range of different techniques. The data suggest that this additive-free type of ACC does not resemble clear proto-structural motifs relating to any crystalline polymorph. This can be explained by the undefined pH value inmore » iso-propanolic media, and the virtually instantaneous precipitation. Altogether, this work suggests that aqueous systems and pathways involving pre-nucleation clusters are required for the generation of clear proto-structural features in ACC. Experiments on the ACC-to-crystalline transformation in solution with and without ethanol highlight that polymorph selection is under kinetic control, while the presence of ethanol can control dissolution re-crystallisation pathways.« less
Ortiz, Cristina; Casanova, Mercedes; Palacios, Pilar
2017-01-01
Assembly of the proto-ring, formed by the essential FtsZ, FtsA and ZipA proteins, and its progression into a divisome, are essential events for Escherichia coli division. ZapC is a cytoplasmic protein that belongs to a group of non-essential components that assist FtsZ during proto-ring assembly. Any overproduction of these proteins leads to faulty FtsZ-rings, resulting in a cell division block. We show that ZapC overproduction can be counteracted by an excess of the ZipA-independent hypermorph FtsA* mutant, but not by similar amounts of wild type FtsA+. An excess of FtsA+ allowed regular spacing of the ZapC-blocked FtsZ-rings, but failed to promote recruitment of the late-assembling proteins FtsQ, FtsK and FtsN and therefore, to activate constriction. In contrast, overproduction of FtsA*, besides allowing correct FtsZ-ring localization at midcell, restored the ability of FtsQ, FtsK and FtsN to be incorporated into active divisomes. PMID:28877250
Making the Moon from a fast-spinning Earth: a giant impact followed by resonant despinning.
Ćuk, Matija; Stewart, Sarah T
2012-11-23
A common origin for the Moon and Earth is required by their identical isotopic composition. However, simulations of the current giant impact hypothesis for Moon formation find that most lunar material originated from the impactor, which should have had a different isotopic signature. Previous Moon-formation studies assumed that the angular momentum after the impact was similar to that of the present day; however, Earth-mass planets are expected to have higher spin rates at the end of accretion. Here, we show that typical last giant impacts onto a fast-spinning proto-Earth can produce a Moon-forming disk derived primarily from Earth's mantle. Furthermore, we find that a faster-spinning early Earth-Moon system can lose angular momentum and reach the present state through an orbital resonance between the Sun and Moon.
Unique presentation of cutis laxa with Leigh-like syndrome due to ECHS1 deficiency.
Balasubramaniam, S; Riley, L G; Bratkovic, D; Ketteridge, D; Manton, N; Cowley, M J; Gayevskiy, V; Roscioli, T; Mohamed, M; Gardeitchik, T; Morava, E; Christodoulou, J
2017-09-01
Clinical finding of cutis laxa, characterized by wrinkled, redundant, sagging, nonelastic skin, is of growing significance due to its occurrence in several different inborn errors of metabolism (IEM). Metabolic cutis laxa results from Menkes syndrome, caused by a defect in the ATPase copper transporting alpha (ATP7A) gene; congenital disorders of glycosylation due to mutations in subunit 7 of the component of oligomeric Golgi (COG7)-congenital disorders of glycosylation (CDG) complex; combined disorder of N- and O-linked glycosylation, due to mutations in ATPase H+ transporting V0 subunit a2 (ATP6VOA2) gene; pyrroline-5-carboxylate reductase 1 deficiency; pyrroline-5-carboxylate synthase deficiency; macrocephaly, alopecia, cutis laxa, and scoliosis (MACS) syndrome, due to Ras and Rab interactor 2 (RIN2) mutations; transaldolase deficiency caused by mutations in the transaldolase 1 (TALDO1) gene; Gerodermia osteodysplastica due to mutations in the golgin, RAB6-interacting (GORAB or SCYL1BP1) gene; and mitogen-activated pathway (MAP) kinase defects, caused by mutations in several genes [protein tyrosine phosphatase, non-receptor-type 11 (PTPN11), RAF, NF, HRas proto-oncogene, GTPase (HRAS), B-Raf proto-oncogene, serine/threonine kinase (BRAF), MEK1/2, KRAS proto-oncogene, GTPase (KRAS), SOS Ras/Rho guanine nucleotide exchange factor 2 (SOS2), leucine rich repeat scaffold protein (SHOC2), NRAS proto-oncogene, GTPase (NRAS), and Raf-1 proto-oncogene, serine/threonine kinase (RAF1)], which regulate the Ras-MAPK cascade. Here, we further expand the list of inborn errors of metabolism associated with cutis laxa by describing the clinical presentation of a 17-month-old girl with Leigh-like syndrome due to enoyl coenzyme A hydratase, short chain, 1, mitochondria (ECHS1) deficiency, a mitochondrial matrix enzyme that catalyzes the second step of the beta-oxidation spiral of fatty acids and plays an important role in amino acid catabolism, particularly valine.
Better End-Cap Processing for Oxidation-Resistant Polyimides
NASA Technical Reports Server (NTRS)
Meador, Mary Ann B.; Frimer, Aryeh A.
2004-01-01
A class of end-cap compounds that increase the thermo-oxidative stab ility of polyimides of the polymerization of monomeric reactants (PM R) type has been extended. In addition, an improved processing proto col for this class of end-cap compounds has been invented.
SU-E-T-594: Preliminary Active Scanning Results of KHIMA
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kim, C; Yang, T; Chang, S
Purpose: To verify the design criteria on heavy ion beam irradiation, developing a proto type active scanning system was purposed. The active scanning system consists of scanning magnet, power supplies, beam monitors, energy modulation system, and irradiation control system. Methods: Each components of the active scanning system was designed for carbon beam first. For the fast ramping a laminated yoke was purposed. To measure incoming dose and profile, a plate and strip type of ion chambers were designed. Also, ridge filter and range shifter was manufactured. And, the scanning system was modified to adopt 45 MeV of proton beam becausemore » of the absence of carbon ion beam in Korea. The system was installed in a beam line at MC-50, KIRAMS. Also, the irradiation control system and planning software was provided. Results: The scanning experiment was performed by drawing KHIMA logo on GaF film. The logo was scanned by 237 scanning points through time normalized intensity modulation. Also, a grid points scanning was performed to measure the scanning resolution and intensity resolution. Conclusion: A prototype active scanning system was successfully designed and manufactured. Also, an initial experiment to print out a drawing on GaF film through the scanning system was completed. More experiments would be required to specify the system performance.« less
A Decision-Based Methodology for Object Oriented-Design
1988-12-16
willing to take the time to meet together weekly for mutual encouragement and prayer . Their friendship, uncompromising standards, and lifestyle were...assume the validity of the object-oriented and software engineering principles involved, and define and proto- type a generic, language independent...mean- ingful labels for variables, abstraction requires the ability to define new types that relieve the programmer from having to know or mess with
Heat flux estimates of power balance on Proto-MPEX with IR imaging
DOE Office of Scientific and Technical Information (OSTI.GOV)
Showers, M., E-mail: mshower1@vols.utk.edu; Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831; Biewer, T. M.
The Prototype Material Plasma Exposure eXperiment (Proto-MPEX) at Oak Ridge National Laboratory (ORNL) is a precursor linear plasma device to the Material Plasma Exposure eXperiment (MPEX), which will study plasma material interactions (PMIs) for future fusion reactors. This paper will discuss the initial steps performed towards completing a power balance on Proto-MPEX to quantify where energy is lost from the plasma, including the relevant diagnostic package implemented. Machine operating parameters that will improve Proto-MPEX’s performance may be identified, increasing its PMI research capabilities.
The petrogenesis of oceanic kimberlites and included mantle megacrysts: The Malaitan alnoite
NASA Technical Reports Server (NTRS)
Neal, Clive R.
1988-01-01
The study of unambiguous suboceanic mantle was facilitated by the occurrence of anomalous kimberlite-type intrusives on Malaita in the Solomon Islands. The pseudo-kimberlites were termed alnoites, and are basically mica lamprophyres with melilite in the ground mass. Alnoitic magmas were explosively intruded into the Ontong Java Plateau (OJP) 34 Ma ago. The OJP is a vastly overthickened portion of the Pacific plate which now abuts the Indo-Australian plate. Malaita is considered to be the obducted leading edge of the OJP. Initial diapiric upwelling beneath the OJP produced the proto-alnoite magma. After impingement on the rigid lithosphere, megacrysts fractionation occurred, with augites precipitating first, representing the parental magma. Sea water-altered oceanic crust, which underplated the OJP, was assimilated by the proto-alnoite magma during megacrysts fractionation (AFC).
Mikić, Aleksandar
2012-01-01
This preliminary research was aimed at finding the roots in various Eurasian proto-languages directly related to pulses and giving the words denoting the same in modern European languages. Six Proto-Indo-European roots were indentified, namely arnk(')- (‘a leguminous plant’), *bhabh- (‘field bean’), * (‘a kernel of leguminous plant’, ‘pea’), ghArs- (‘a leguminous plant’), *kek- (‘pea’) and *lent- (‘lentil’). No Proto-Uralic root was attested save hypothetically *kača (‘pea’), while there were two Proto-Altaic roots, *bŭkrV (‘pea’) and * (‘lentil’). The Proto-Caucasianx root * denoted pea, while another one, *hōwł(ā) (‘bean’, ‘lentil’) and the Proto-Basque root *iłha-r (‘pea’, ‘bean’, ‘vetch’) could have a common Proto-Sino-Caucasian ancestor, *hVwłV (‘bean’) within the hypothetic Dené-Caucasian language superfamily. The Modern Maltese preserved the memory of two Proto-Semitic roots, *'adaš- (‘lentil’) and *pūl- (‘field bean’). The presented results prove that the most ancient Eurasian pulse crops were well-known and extensively cultivated by the ancestors of all modern European nations. The attested lexicological continuum witnesses the existence of a millennia-long links between the peoples of Eurasia to their mutual benefit. This research is meant to encourage interdisciplinary concerted actions between plant scientists dealing with crop evolution and biodiversity, archaeobotanists and language historians. PMID:22973458
Education Policy as Proto-Fascism: The Aesthetics of Racial Neo-Liberalism
ERIC Educational Resources Information Center
Webb, P. Taylor; Gulson, Kalervo N.
2011-01-01
We argue that neo-liberal educational policy has emerged as a proto-fascist governmentality. This contemporary technology relies on State racisms and racial orderings manifested from earlier liberal and neo-liberal practices of biopower. As a proto-fascist technology, education policy, and school choice policies in particular, operate within a…
PROTO-PLASM: parallel language for adaptive and scalable modelling of biosystems.
Bajaj, Chandrajit; DiCarlo, Antonio; Paoluzzi, Alberto
2008-09-13
This paper discusses the design goals and the first developments of PROTO-PLASM, a novel computational environment to produce libraries of executable, combinable and customizable computer models of natural and synthetic biosystems, aiming to provide a supporting framework for predictive understanding of structure and behaviour through multiscale geometric modelling and multiphysics simulations. Admittedly, the PROTO-PLASM platform is still in its infancy. Its computational framework--language, model library, integrated development environment and parallel engine--intends to provide patient-specific computational modelling and simulation of organs and biosystem, exploiting novel functionalities resulting from the symbolic combination of parametrized models of parts at various scales. PROTO-PLASM may define the model equations, but it is currently focused on the symbolic description of model geometry and on the parallel support of simulations. Conversely, CellML and SBML could be viewed as defining the behavioural functions (the model equations) to be used within a PROTO-PLASM program. Here we exemplify the basic functionalities of PROTO-PLASM, by constructing a schematic heart model. We also discuss multiscale issues with reference to the geometric and physical modelling of neuromuscular junctions.
Proto-Plasm: parallel language for adaptive and scalable modelling of biosystems
Bajaj, Chandrajit; DiCarlo, Antonio; Paoluzzi, Alberto
2008-01-01
This paper discusses the design goals and the first developments of Proto-Plasm, a novel computational environment to produce libraries of executable, combinable and customizable computer models of natural and synthetic biosystems, aiming to provide a supporting framework for predictive understanding of structure and behaviour through multiscale geometric modelling and multiphysics simulations. Admittedly, the Proto-Plasm platform is still in its infancy. Its computational framework—language, model library, integrated development environment and parallel engine—intends to provide patient-specific computational modelling and simulation of organs and biosystem, exploiting novel functionalities resulting from the symbolic combination of parametrized models of parts at various scales. Proto-Plasm may define the model equations, but it is currently focused on the symbolic description of model geometry and on the parallel support of simulations. Conversely, CellML and SBML could be viewed as defining the behavioural functions (the model equations) to be used within a Proto-Plasm program. Here we exemplify the basic functionalities of Proto-Plasm, by constructing a schematic heart model. We also discuss multiscale issues with reference to the geometric and physical modelling of neuromuscular junctions. PMID:18559320
ProtoMD: A prototyping toolkit for multiscale molecular dynamics
NASA Astrophysics Data System (ADS)
Somogyi, Endre; Mansour, Andrew Abi; Ortoleva, Peter J.
2016-05-01
ProtoMD is a toolkit that facilitates the development of algorithms for multiscale molecular dynamics (MD) simulations. It is designed for multiscale methods which capture the dynamic transfer of information across multiple spatial scales, such as the atomic to the mesoscopic scale, via coevolving microscopic and coarse-grained (CG) variables. ProtoMD can be also be used to calibrate parameters needed in traditional CG-MD methods. The toolkit integrates 'GROMACS wrapper' to initiate MD simulations, and 'MDAnalysis' to analyze and manipulate trajectory files. It facilitates experimentation with a spectrum of coarse-grained variables, prototyping rare events (such as chemical reactions), or simulating nanocharacterization experiments such as terahertz spectroscopy, AFM, nanopore, and time-of-flight mass spectroscopy. ProtoMD is written in python and is freely available under the GNU General Public License from github.com/CTCNano/proto_md.
The impact of mitochondrial endosymbiosis on the evolution of calcium signaling.
Blackstone, Neil W
2015-03-01
At high concentrations, calcium has detrimental effects on biological systems. Life likely arose in a low calcium environment, and the first cells evolved mechanisms to maintain this environment internally. Bursts of calcium influx followed by efflux or sequestration thus developed in a functional context. For example, in proto-cells with exterior energy-converting membranes, such bursts could be used to depolarize the membrane. In this way, proto-cells could maintain maximal phosphorylation (metabolic state 3) and moderate levels of reactive oxygen species (ROS), while avoiding the resting state (metabolic state 4) and high levels of ROS. This trait is likely a shared primitive characteristic of prokaryotes. When eukaryotes evolved, the α-proteobacteria that gave rise to proto-mitochondria inhabited a novel environment, the interior of the proto-eukaryote that had a low calcium concentration. In this environment, metabolic homeostasis was difficult to maintain, and there were inherent risks from ROS, yet depolarizing the proto-mitochondrial membrane by calcium influx was challenging. To maintain metabolic state 3, proto-mitochondria were required to congregate near calcium influx points in the proto-eukaryotic membrane. This behavior, resulting in embryonic forms of calcium signaling, may have occurred immediately after the initiation of the endosymbiosis. Along with ROS, calcium may have served as one of the key forms of crosstalk among the community of prokaryotes that led to the eukaryotic cell. Copyright © 2014 Elsevier Ltd. All rights reserved.
Wang, Fengping; Zhou, Huaiyang; Meng, Jun; Peng, Xiaotong; Jiang, Lijing; Sun, Ping; Zhang, Chuanlun; Van Nostrand, Joy D.; Deng, Ye; He, Zhili; Wu, Liyou; Zhou, Jizhong; Xiao, Xiang
2009-01-01
Deep-sea hydrothermal vents are one of the most unique and fascinating ecosystems on Earth. Although phylogenetic diversity of vent communities has been extensively examined, their physiological diversity is poorly understood. In this study, a GeoChip-based, high-throughput metagenomics technology revealed dramatic differences in microbial metabolic functions in a newly grown protochimney (inner section, Proto-I; outer section, Proto-O) and the outer section of a mature chimney (4143-1) at the Juan de Fuca Ridge. Very limited numbers of functional genes were detected in Proto-I (113 genes), whereas much higher numbers of genes were detected in Proto-O (504 genes) and 4143-1 (5,414 genes). Microbial functional genes/populations in Proto-O and Proto-I were substantially different (around 1% common genes), suggesting a rapid change in the microbial community composition during the growth of the chimney. Previously retrieved cbbL and cbbM genes involved in the Calvin Benson Bassham (CBB) cycle from deep-sea hydrothermal vents were predominant in Proto-O and 4143-1, whereas photosynthetic green-like cbbL genes were the major components in Proto-I. In addition, genes involved in methanogenesis, aerobic and anaerobic methane oxidation (e.g., ANME1 and ANME2), nitrification, denitrification, sulfate reduction, degradation of complex carbon substrates, and metal resistance were also detected. Clone libraries supported the GeoChip results but were less effective than the microarray in delineating microbial populations of low biomass. Overall, these results suggest that the hydrothermal microbial communities are metabolically and physiologically highly diverse, and the communities appear to be undergoing rapid dynamic succession and adaptation in response to the steep temperature and chemical gradients across the chimney. PMID:19273854
NASA Astrophysics Data System (ADS)
Saito, Hiroaki; Kuramoto, Kiyoshi
2015-11-01
Recent precise Hf-W chronometry of Martian meteorites reveals that Mars had likely reached the half of its present mass within 3 Myr from the birth of the solar system (Dauphas and Pourmand, 2011). Hence, the accretion is considered to almost proceed within the solar nebula associated with the capture of nebula gas components. At the same time, the impact degassing may inevitably occur because impact velocity increases high enough for such degassing when a proto-planet gets larger than around lunar size. Thus, we can expect the formation of a hybrid-type proto-atmosphere that consists of nebula gas and degassed one.This study analyzes the thermal structure of this proto-atmosphere sustained by accretional heating by building a 1D radiative-convective equilibrium model. Raw materials of Mars are supposed to be volatile-rich on the basis of the geochemical systematics of Mars meteorites (Dreibus and Wanke, 1988). The composition of degassed component comprised of H2, H2O, CH4, and CO is determined by chemical equilibrium with silicate and metal under the physical condition of locally heated region generated by each impact (Kuramoto, 1997). Degassed component lies beneath the nebula gas atmosphere at altitudes below the compositional boundary height that would change depending on the amount of degassed component. The accretion time is taken to be from 1 to 6 Myr.Our model predicts that the surface temperature exceeds the liquidus temperature of rock when a proto Mars grows larger than 0.7 times of its present mass for the longest accretion time case. In this case, the magma ocean mass just after the end of accretion is 0.2 times of its present mass if heat transfer and heat sources such as short-lived radionuclides are neglected in the interior. The corresponding amount of water dissolved into the magma ocean would be around 1.8 times the present Earth ocean mass. These results suggest that the earliest Mars would be hot enough to form deep magma oceans, which promotes the core-mantle differentiation, and wet sufficient to make a deep-water ocean.
Practical application of air-quality research incorporated in CMHC's research house.
Rafuse, J
1995-01-01
The Canada Mortgage and Housing Corporation has been looking at ways to improve indoor air quality since 1984 and now hopes to interest house designers and manufacturers in the results of its research. Its flagship project has been the construction of a proto-type research house for environmentally hypersensitive people. PMID:7736379
NASA Astrophysics Data System (ADS)
Nakashole, Albertina N.; Hodgson, David M.; Chapman, Robert J.; Morgan, Dan J.; Jacob, Roger J.
2018-02-01
Establishing relationships between the long-term landscape evolution of drainage basins and the fill of sedimentary basins benefits from analysis of bedrock river terrace deposits. These fragmented detrital archives help to constrain changes in river system character and provenance during sediment transfer from continents (source) to oceans (sink). Thick diamondiferous gravel terrace deposits along the lower Orange River, southern Namibia, provide a rare opportunity to investigate controls on the incision history of a continental-scale bedrock river. Clast assemblage and heavy mineral data from seven localities permit detailed characterisation of the lower Orange River gravel terrace deposits. Two distinct fining-upward gravel terrace deposits are recognised, primarily based on mapped stratigraphic relationships (cross-cutting relationships) and strath and terrace top elevations, and secondarily on the proportion of exotic clasts, referred to as Proto Orange River deposits and Meso Orange River deposits. The older early to middle Miocene Proto Orange River gravels are thick (up to 50 m) and characterised by a dominance of Karoo Supergroup shale and sandstone clasts, whereas the younger Plio-Pleistocene Meso Orange River gravels (6-23 m thick) are characterised by more banded iron formation clasts. Mapping of the downstepping terraces indicates that the Proto gravels were deposited by a higher sinuosity river, and are strongly discordant to the modern Orange River course, whereas the Meso deposits were deposited by a lower sinuosity river. The heavy minerals present in both units comprise magnetite, garnet, amphibole, epidote and ilmenite, with rare titanite and zircon grains. The concentration of amphibole-epidote in the heavy minerals fraction increases from the Proto to the Meso deposits. The decrease in incision depths, recorded by deposit thicknesses above strath terraces, and the differences in clast character (size and roundness) and type between the two units, are ascribed to a more powerful river system during Proto-Orange River time, rather than reworking of older deposits, changes in provenance or climatic variations. In addition, from Proto- to Meso-Orange River times there was an increase in the proportion of sediments supplied from local bedrock sources, including amphibole-epidote in the heavy mineral assemblages derived from the Namaqua Metamorphic Complex. This integrated study demonstrates that clast assemblages are not a proxy for the character of the matrix, and vice versa, because they are influenced by the interplay of different controls. Therefore, an integrated approach is needed to improve prediction of placer mineral deposits in river gravels, and their distribution in coeval deposits downstream.
Physical state of the very early Earth
NASA Astrophysics Data System (ADS)
Abe, Yutaka
1993-09-01
The earliest surface environment of the Earth is reconstructed in accordance with the planetary formation theory. Formation of an atmosphere is an inevitable consequence of Earth's formation. The atmosphere near the close of accretion is composed of 200 ˜ 300 bars of H 2 and H 2O, and several tens of bars of CO and CO 2. Either by the blanketing effect of the proto-atmosphere or heating by large planetesimal impacts a magma ocean is formed during accretion. We can distinguish three stages for the thermal evolution of the magma ocean and proto-crust. Stage 0 is characterized by a super-liquidus (or completely molten) regime near the surface. At this stage the surface of the Earth is covered by a super-liquidus magma ocean. No chemical differentiation is expected during this stage. Once the energy flux released by planet formation decreases to the 200 W/m 2 level the super-liquidus magma ocean then disappears within a time interval of 1 m.y. This is the transition from stage 0 to 1. Stage 1 is characterized by a partially molten magma ocean. In the magma ocean consisting of 20 ˜ 30% partial melt, heat transport is controlled by melt-solid separation (a type of compositional convection) rather than thermal convection. Chemical differentiation of the mantle mainly occurs in this stage. Once the energy flux drops to the 160 W/m 2 level, more than 90% of water vapor in the proto-atmosphere condense to form the proto-oceans. Several tens of bars of CO and CO 2 remain in the atmosphere just after formation of the oceans. Water oceans are occasionally evaporated by large impacts. After each such event, recondensation of the ocean takes several hundred years. Although the surface is covered by a chilled proto-crust, it is short-lived because of extensive volcanic resurfacing activity as well as meteorite impacts resurfacing. This stage ends when the energy flux drops to 0.1 ˜ 1 W/m 2 level. The duration time of stage 1 is estimated to be several hundred million years (the best estimate is about 400 m.y.). Stage 2 is characterized by solid state convection. This stage continues to the present day. One of the most important change on the proto-Earth is the transition from stage 1 to 2, which occurs several hundred million years after the Earth formation. Long-lived crust is formed only after this transition.
Research on the space-borne coherent wind lidar technique and the prototype experiment
NASA Astrophysics Data System (ADS)
Gao, Long; Tao, Yuliang; An, Chao; Yang, Jukui; Du, Guojun; Zheng, Yongchao
2016-10-01
Space-borne coherent wind lidar technique is considered as one of the most promising and appropriate remote Sensing methods for successfully measuring the whole global vector wind profile between the lower atmosphere and the middle atmosphere. Compared with other traditional methods, the space-borne coherent wind lidar has some advantages, such as, the all-day operation; many lidar systems can be integrated into the same satellite because of the light-weight and the small size, eye-safe wavelength, and being insensitive to the background light. Therefore, this coherent lidar could be widely applied into the earth climate research, disaster monitoring, numerical weather forecast, environment protection. In this paper, the 2μm space-borne coherent wind lidar system for measuring the vector wind profile is proposed. And the technical parameters about the sub-system of the coherent wind lidar are simulated and the all sub-system schemes are proposed. For sake of validating the technical parameters of the space-borne coherent wind lidar system and the optical off-axis telescope, the weak laser signal detection technique, etc. The proto-type coherent wind lidar is produced and the experiments for checking the performance of this proto-type coherent wind lidar are finished with the hard-target and the soft target, and the horizontal wind and the vertical wind profile are measured and calibrated, respectively. For this proto-type coherent wind lidar, the wavelength is 1.54μm, the pulse energy 80μJ, the pulse width 300ns, the diameter of the off-axis telescope 120mm, the single wedge for cone scanning with the 40°angle, and the two dualbalanced InGaAs detector modules are used. The experiment results are well consisted with the simulation process, and these results show that the wind profile between the vertical altitude 4km can be measured, the accuracy of the wind velocity and the wind direction are better than 1m/s and +/-10°, respectively.
NASA Astrophysics Data System (ADS)
Barnes, P.; Ghisetti, F.; Ellis, S. M.; Morgan, J.
2016-12-01
Proto-thrusts are an enigmatic structural feature at the toe of many subduction accretionary wedges. They are commonly recognised in seismic reflection sections as relatively small-displacement (tens of metres) faults seaward of the primary deformation front. Although widely assumed to reflect incipient accretionary deformation and to mark the location of future thrusts, proto-thrusts have received relatively little attention. Few studies have attempted to characterise their displacement properties, evolution, and kinematic role in frontal accretion processes associated with propagation of the interface décollement. In this study, we make use of excellent quality geophysical and bathymetric imaging of the spectacular 25 km-wide Hikurangi margin proto-thrust zone (PTZ), the structure of which varies significantly along strike. From a detailed structural analysis, we provide the first substantial quantitative dataset on proto-thrust geometry, displacement profiles, fault scaling relationships, and fault population characteristics. These analyses provide new insights into the role of inferred stratigraphic inhomogeneity in proto-thrust development, and the role of proto-thrust arrays in frontal accretion. Our observations, combined with our own recently published reconstructions of the wedge, and ongoing numerical simulations, indicate a migrating wave of proto-thrust activity in association with forward-advancement of the décollement. Calculation of tectonic shortening accommodated by the active PTZ east of the present deformation front, from measurements of seismically-imaged fault displacements and estimates of sub-seismic faulting derived from power law relationships, reveal their surprisingly significant role in accommodating regional plate convergence. South of the colliding Bennett Knoll Seamount, the predominantly seaward-vergent PTZ has accommodated 3.3 km of tectonic shortening, of which 70% is at sub-seismic scale. In comparison, north of Bennett Knoll Seamount, the predominantly landward-vergent PTZ has accommodated 4 km of shortening, of which 87% is at sub-seismic scale. These data combined with estimates of stratigraphic ages and deformation duration, indicate that proto-thrusts potentially accommodate up 30-50% of the total convergence rate.
The Earliest Chinese Proto-Porcelain Excavated from Kiln Sites: An Elemental Analysis
Li, Yu; Zhang, Bin; Cheng, Huansheng; Zheng, Jianming
2015-01-01
In June 2012, the Piaoshan kiln site was excavated in Huzhou, Zhejiang Province, which hitherto proved to be the earliest known Chinese proto-porcelain kiln. Judging from the decorative patterns of unearthed impressed stoneware and proto-porcelain sherds, the site was determined to date to the late Xia (c. 2070–c. 1600 BC), the first dynasty of China. Here, we report on proton-induced X-ray emission analyses of 118 proto-porcelain and 35 impressed stoneware sherds from Piaoshan and five subsequent kiln sites in the vicinity. Using principal components analysis on the major chemical compositions, we reveal the relationships between impressed stoneware and proto-porcelain samples from the six kiln sites. The sherds from different sites have distinctive chemical profiles. The results indicate that the raw materials were procured locally. We find a developmental tendency for early glazes towards mature calcium-based glaze. It is most likely that woody plant ashes with increased calcia-potash ratios were applied to the formula. PMID:26535583
The Earliest Chinese Proto-Porcelain Excavated from Kiln Sites: An Elemental Analysis.
Li, Yu; Zhang, Bin; Cheng, Huansheng; Zheng, Jianming
2015-01-01
In June 2012, the Piaoshan kiln site was excavated in Huzhou, Zhejiang Province, which hitherto proved to be the earliest known Chinese proto-porcelain kiln. Judging from the decorative patterns of unearthed impressed stoneware and proto-porcelain sherds, the site was determined to date to the late Xia (c. 2070-c. 1600 BC), the first dynasty of China. Here, we report on proton-induced X-ray emission analyses of 118 proto-porcelain and 35 impressed stoneware sherds from Piaoshan and five subsequent kiln sites in the vicinity. Using principal components analysis on the major chemical compositions, we reveal the relationships between impressed stoneware and proto-porcelain samples from the six kiln sites. The sherds from different sites have distinctive chemical profiles. The results indicate that the raw materials were procured locally. We find a developmental tendency for early glazes towards mature calcium-based glaze. It is most likely that woody plant ashes with increased calcia-potash ratios were applied to the formula.
Mitochondrial DNA Suggests a Western Eurasian Origin for Ancient (Proto-) Bulgarians.
Nesheva, D V; Karachanak-Yankova, S; Lari, M; Yordanov, Y; Galabov, A; Caramelli, D; Toncheva, D
2015-01-01
Ancient (proto-) Bulgarians have long been thought of as a Turkic population. However, evidence found in the past three decades shows that this is not the case. Until now, this evidence has not included ancient mitochondrial DNA (mtDNA) analysis. To fill this void, we collected human remains from the 8th to the 10th century AD located in three necropolises in Bulgaria: Nojarevo (Silistra region) and Monastery of Mostich (Shumen region), both in northeastern Bulgaria, and Tuhovishte (Satovcha region) in southwestern Bulgaria. The phylogenetic analysis of 13 ancient DNA samples (extracted from teeth) identified 12 independent haplotypes, which we further classified into mtDNA haplogroups found in present-day European and western Eurasian populations. Our results suggest a western Eurasian matrilineal origin for proto-Bulgarians, as well as a genetic similarity between proto- and modern Bulgarians. Our future work will provide additional data that will further clarify proto-Bulgarian origins, thereby adding new clues to the current understanding of European genetic evolution.
Particle and heat flux estimates in Proto-MPEX in Helicon Mode with IR imaging
NASA Astrophysics Data System (ADS)
Showers, M. A.; Biewer, T. M.; Caughman, J. B. O.; Donovan, D. C.; Goulding, R. H.; Rapp, J.
2016-10-01
The Prototype Material Plasma Exposure eXperiment (Proto-MPEX) at Oak Ridge National Laboratory (ORNL) is a linear plasma device developing the plasma source concept for the Material Plasma Exposure eXperiment (MPEX), which will address plasma material interaction (PMI) science for future fusion reactors. To better understand how and where energy is being lost from the Proto-MPEX plasma during ``helicon mode'' operations, particle and heat fluxes are quantified at multiple locations along the machine length. Relevant diagnostics include infrared (IR) cameras, four double Langmuir probes (LPs), and in-vessel thermocouples (TCs). The IR cameras provide temperature measurements of Proto-MPEX's plasma-facing dump and target plates, located on either end of the machine. The change in surface temperature is measured over the duration of the plasma shot to determine the heat flux hitting the plates. The IR cameras additionally provide 2-D thermal load distribution images of these plates, highlighting Proto-MPEX plasma behaviors, such as hot spots. The LPs and TCs provide additional plasma measurements required to determine particle and heat fluxes. Quantifying axial variations in fluxes will help identify machine operating parameters that will improve Proto-MPEX's performance, increasing its PMI research capabilities. This work was supported by the U.S. D.O.E. contract DE-AC05-00OR22725.
Why Were Polysaccharides Necessary?
NASA Astrophysics Data System (ADS)
Tolstoguzov, Vladimir
2004-12-01
The main idea of this paper is that the primordial soup may be modelled by food systems whose structure-property relationship is based on non-specific interactions between denatured biopolymers. According to the proposed hypothesis, polysaccharides were the first biopolymers that decreased concentration of salts in the primordial soup, `compatibilised' and drove the joint evolution of proto-biopolymers. Synthesis of macromolecules within the polysaccharide-rich medium could have resulted in phase separation of the primordial soup and concentration of the polypeptides and nucleic acids in the dispersed phase particles. The concentration of proto-biopolymer mixtures favoured their cross-linking in hybrid supermacromolecules of conjugates. The cross-linking of proto-biopolymers could occur by hydrophobic, electrostatic interactions, H-bonds due to freezing aqueous mixed biopolymer dispersions and/or by covalent bonds due to the Maillard reaction. Cross-linking could have increased the local concentration of chemically different proto-biopolymers, fixed their relative positions and made their interactions reproducible. Attractive-repulsive interactions between cross-linked proto-biopolymer chains could develop pairing of the monomer units, improved chemical stability (against hydrolysis) and led to their mutual catalytic activity and coding. Conjugates could probably evolve to the first self-reproduced entities and then to specialized cellular organelles. Phase separation of the primordial soup with concentration of conjugates in the dispersed particles has probably resulted in proto-cells.
ProtoDESI: First On-Sky Technology Demonstration for the Dark Energy Spectroscopic Instrument
NASA Astrophysics Data System (ADS)
Fagrelius, Parker; Abareshi, Behzad; Allen, Lori; Ballester, Otger; Baltay, Charles; Besuner, Robert; Buckley-Geer, Elizabeth; Butler, Karen; Cardiel, Laia; Dey, Arjun; Duan, Yutong; Elliott, Ann; Emmet, William; Gershkovich, Irena; Honscheid, Klaus; Illa, Jose M.; Jimenez, Jorge; Joyce, Richard; Karcher, Armin; Kent, Stephen; Lambert, Andrew; Lampton, Michael; Levi, Michael; Manser, Christopher; Marshall, Robert; Martini, Paul; Paat, Anthony; Probst, Ronald; Rabinowitz, David; Reil, Kevin; Robertson, Amy; Rockosi, Connie; Schlegel, David; Schubnell, Michael; Serrano, Santiago; Silber, Joseph; Soto, Christian; Sprayberry, David; Summers, David; Tarlé, Greg; Weaver, Benjamin A.
2018-02-01
The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the universe using the baryon acoustic oscillations technique. The spectra of 35 million galaxies and quasars over 14,000 square degrees will be measured during a 5-year survey. A new prime focus corrector for the Mayall telescope at Kitt Peak National Observatory will deliver light to 5,000 individually targeted fiber-fed robotic positioners. The fibers in turn feed ten broadband multi-object spectrographs. We describe the ProtoDESI experiment, that was installed and commissioned on the 4-m Mayall telescope from 2016 August 14 to September 30. ProtoDESI was an on-sky technology demonstration with the goal to reduce technical risks associated with aligning optical fibers with targets using robotic fiber positioners and maintaining the stability required to operate DESI. The ProtoDESI prime focus instrument, consisting of three fiber positioners, illuminated fiducials, and a guide camera, was installed behind the existing Mosaic corrector on the Mayall telescope. A fiber view camera was mounted in the Cassegrain cage of the telescope and provided feedback metrology for positioning the fibers. ProtoDESI also provided a platform for early integration of hardware with the DESI Instrument Control System that controls the subsystems, provides communication with the Telescope Control System, and collects instrument telemetry data. Lacking a spectrograph, ProtoDESI monitored the output of the fibers using a fiber photometry camera mounted on the prime focus instrument. ProtoDESI was successful in acquiring targets with the robotically positioned fibers and demonstrated that the DESI guiding requirements can be met.
Spitzer Imaging of Planck-Herschel Dusty Proto-Clusters at z=2-3
NASA Astrophysics Data System (ADS)
Cooray, Asantha; Ma, Jingzhe; Greenslade, Joshua; Kubo, Mariko; Nayyeri, Hooshang; Clements, David; Cheng, Tai-An
2018-05-01
We have recently introduced a new proto-cluster selection technique by combing Herschel/SPIRE imaging data and Planck/HFIk all-sky survey point source catalog. These sources are identified as Planck point sources with clumps of Herschel source over-densities with far-IR colors comparable to z=0 ULIRGS redshifted to z=2 to 3. The selection is sensitive to dusty starbursts and obscured QSOs and we have recovered couple of the known proto-clusters and close to 30 new proto-clusters. The candidate proto-clusters selected from this technique have far-IR flux densities several times higher than those that are optically selected, such as using LBG selection, implying that the member galaxies are in a special phase of heightened dusty starburst and dusty QSO activity. This far-IR luminous phase may be short but likely to be necessary piece to understand the whole stellar mass assembly history of clusters. Moreover, our photo-clusters are missed in optical selections, suggesting that optically selected proto-clusters alone do not provide adequate statistics and a comparison of the far-IR and optical selected clusters may reveal the importance of the dusty stellar mass assembly. Here, we propose IRAC observations of six of the highest priority new proto-clusters, to establish the validity of the technique and to determine the total stellar mass through SED models. For a modest observing time the science program will have a substantial impact on an upcoming science topic in cosmology with implications for observations with JWST and WFIRST to understand the mass assembly in the universe.
Kobayashi, Yuki; Kanesaki, Yu; Tanaka, Ayumi; Kuroiwa, Haruko; Kuroiwa, Tsuneyoshi; Tanaka, Kan
2009-01-01
Eukaryotic cells arose from an ancient endosymbiotic association of prokaryotes, with plant cells harboring 3 genomes as the remnants of such evolution. In plant cells, plastid and mitochondrial DNA replication [organelle DNA replication (ODR)] occurs in advance of the subsequent cell cycles composed of nuclear DNA replication (NDR) and cell division. However, the mechanism by which replication of these genomes with different origins is coordinated is largely unknown. Here, we show that NDR is regulated by a tetrapyrrole signal in plant cells, which has been suggested as an organelle-to-nucleus retrograde signal. In synchronized cultures of the primitive red alga Cyanidioschyzon merolae, specific inhibition of A-type cyclin-dependent kinase (CDKA) prevented NDR but not ODR after onset of the cell cycle. In contrast, inhibition of ODR by nalidixic acid also resulted in inhibition of NDR, indicating a strict dependence of NDR on ODR. The requirement of ODR for NDR was bypassed by addition of the tetrapyrrole intermediates protoporphyrin IX (ProtoIX) or Mg-ProtoIX, both of which activated CDKA without inducing ODR. This scheme was also observed in cultured tobacco cells (BY-2), where inhibition of ODR by nalidixic acid prevented CDKA activation and NDR, and these inhibitions were circumvented by Mg-ProtoIX without inducing ODR. We thus show that tetrapyrrole-mediated organelle–nucleus replicational coupling is an evolutionary conserved process among plant cells. PMID:19141634
Settachaimongkon, Sarn; Nout, M J Robert; Antunes Fernandes, Elsa C; Hettinga, Kasper A; Vervoort, Jacques M; van Hooijdonk, Toon C M; Zwietering, Marcel H; Smid, Eddy J; van Valenberg, Hein J F
2014-05-02
Proto-cooperation between Streptococcus thermophilus and Lactobacillus delbrueckii subsp. bulgaricus is one of the key factors that determine the fermentation process and final quality of yoghurt. In this study, the interaction between different proteolytic strains of S. thermophilus and L. delbrueckii subsp. bulgaricus was investigated in terms of microbial growth, acidification and changes in the biochemical composition of milk during set-yoghurt fermentation. A complementary metabolomics approach was applied for global characterization of volatile and non-volatile polar metabolite profiles of yoghurt associated with proteolytic activity of the individual strains in the starter cultures. The results demonstrated that only non-proteolytic S. thermophilus (Prt-) strain performed proto-cooperation with L. delbrueckii subsp. bulgaricus. The proto-cooperation resulted in significant higher populations of the two species, faster milk acidification, significant abundance of aroma volatiles and non-volatile metabolites desirable for a good organoleptic quality of yoghurt. Headspace SPME-GC/MS and (1)H NMR resulted in the identification of 35 volatiles and 43 non-volatile polar metabolites, respectively. Furthermore, multivariate statistical analysis allows discriminating set-yoghurts fermented by different types of starter cultures according to their metabolite profiles. Our finding underlines that selection of suitable strain combinations in yoghurt starters is important for achieving the best technological performance regarding the quality of product. Copyright © 2014 Elsevier B.V. All rights reserved.
Photoelastic Studies of Internal Stress Distributions of Unidirectional Composites.
1980-12-01
MMR9 rR-80 56 ___ _ - 4. TiTLEand Subtitle) 5. TYPE OF RPOBT & PERIOD COVERED /f Fina1,eprt - _OTOELASIIC UDIES OF LNTERNAL TRESS i11 Sep 79 1-ll...34 verre a, If t nece, e.ry and Identify by block number) ..... ’Io-dimensional phutoelastli, models were used to determine internal taading-. and...The same matrix was used in preparing unidirectional proto- type composite 3pecimens with glass fibers (G filament size.) Six layers of glass roving
ProtoDESI: First On-Sky Technology Demonstration for the Dark Energy Spectroscopic Instrument
Fagrelius, Parker; Abareshi, Behzad; Allen, Lori; ...
2018-01-15
The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the universe using the baryon acoustic oscillations technique. The spectra of 35 million galaxies and quasars over 14,000 square degrees will be measured during a 5-year survey. A new prime focus corrector for the Mayall telescope at Kitt Peak National Observatory will deliver light to 5,000 individually targeted fiber-fed robotic positioners. The fibers in turn feed ten broadband multi-object spectrographs. We describe the ProtoDESI experiment, that was installed and commissioned on the 4-m Mayall telescope from 2016 August 14 to September 30. ProtoDESI was anmore » on-sky technology demonstration with the goal to reduce technical risks associated with aligning optical fibers with targets using robotic fiber positioners and maintaining the stability required to operate DESI. The ProtoDESI prime focus instrument, consisting of three fiber positioners, illuminated fiducials, and a guide camera, was installed behind the existing Mosaic corrector on the Mayall telescope. A fiber view camera was mounted in the Cassegrain cage of the telescope and provided feedback metrology for positioning the fibers. ProtoDESI also provided a platform for early integration of hardware with the DESI Instrument Control System that controls the subsystems, provides communication with the Telescope Control System, and collects instrument telemetry data. In conclusion, lacking a spectrograph, ProtoDESI monitored the output of the fibers using a fiber photometry camera mounted on the prime focus instrument. ProtoDESI was successful in acquiring targets with the robotically positioned fibers and demonstrated that the DESI guiding requirements can be met.« less
Initiation of plate tectonics from post-magma ocean thermochemical convection
NASA Astrophysics Data System (ADS)
Foley, Bradford J.; Bercovici, David; Elkins-Tanton, Linda T.
2014-11-01
Leading theories for the presence of plate tectonics on Earth typically appeal to the role of present day conditions in promoting rheological weakening of the lithosphere. However, it is unknown whether the conditions of the early Earth were favorable for plate tectonics, or any form of subduction, and thus, how subduction begins is unclear. Using physical models based on grain-damage, a grainsize-feedback mechanism capable of producing plate-like mantle convection, we demonstrate that subduction was possible on the Hadean Earth (hereafter referred to as proto-subduction or proto-plate tectonics), that proto-subduction differed from modern day plate tectonics, and that it could initiate rapidly. Scaling laws for convection with grain-damage show that though either higher mantle temperatures or higher surface temperatures lead to slower plates, proto-subduction, with plate speeds of ≈1.75 cm/yr, can still be maintained in the Hadean, even with a CO2 rich primordial atmosphere. Furthermore, when the mantle potential temperature is high (e.g., above ≈2000 K), the mode of subduction switches to a "sluggish subduction" style, where downwellings are drip like and plate boundaries are diffuse. Finally, numerical models of post-magma ocean mantle convection demonstrate that proto-plate tectonics likely initiates within ˜100 Myr of magma ocean solidification, consistent with evidence from Hadean zircons. After the initiation of proto-subduction, non-plate-tectonic "sluggish subduction" prevails, giving way to modern style plate tectonics as both the mantle interior and climate cool. Hadean proto-subduction may hasten the onset of modern plate tectonics by drawing excess CO2 out of the atmosphere and cooling the climate.
ProtoDESI: First On-Sky Technology Demonstration for the Dark Energy Spectroscopic Instrument
DOE Office of Scientific and Technical Information (OSTI.GOV)
Fagrelius, Parker; Abareshi, Behzad; Allen, Lori
The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the universe using the baryon acoustic oscillations technique. The spectra of 35 million galaxies and quasars over 14,000 square degrees will be measured during a 5-year survey. A new prime focus corrector for the Mayall telescope at Kitt Peak National Observatory will deliver light to 5,000 individually targeted fiber-fed robotic positioners. The fibers in turn feed ten broadband multi-object spectrographs. We describe the ProtoDESI experiment, that was installed and commissioned on the 4-m Mayall telescope from 2016 August 14 to September 30. ProtoDESI was anmore » on-sky technology demonstration with the goal to reduce technical risks associated with aligning optical fibers with targets using robotic fiber positioners and maintaining the stability required to operate DESI. The ProtoDESI prime focus instrument, consisting of three fiber positioners, illuminated fiducials, and a guide camera, was installed behind the existing Mosaic corrector on the Mayall telescope. A fiber view camera was mounted in the Cassegrain cage of the telescope and provided feedback metrology for positioning the fibers. ProtoDESI also provided a platform for early integration of hardware with the DESI Instrument Control System that controls the subsystems, provides communication with the Telescope Control System, and collects instrument telemetry data. In conclusion, lacking a spectrograph, ProtoDESI monitored the output of the fibers using a fiber photometry camera mounted on the prime focus instrument. ProtoDESI was successful in acquiring targets with the robotically positioned fibers and demonstrated that the DESI guiding requirements can be met.« less
Tiled Array of Pixelated CZT Imaging Detectors for ProtoEXIST2 and MIRAX-HXI
NASA Astrophysics Data System (ADS)
Hong, Jaesub; Allen, Branden; Grindlay, Jonathan; Rodrigues, Barbara; Ellis, Jon Robert; Baker, Robert; Barthelmy, Scott; Mao, Peter; Miyasaka, Hiromasa; Apple, Jeff
2013-12-01
We have assembled a tiled array (220 cm2) of fine pixel (0.6 mm) imaging CZT detectors for a balloon borne wide-field hard X-ray telescope, ProtoEXIST2. ProtoEXIST2 is a prototype experiment for a next generation hard X-ray imager MIRAX-HXI on board Lattes, a spacecraft from the Agencia Espacial Brasilieira. MIRAX will survey the 5 to 200 keV sky of Galactic bulge, adjoining southern Galactic plane and the extragalactic sky with 6 ' angular resolution. This survey will open a vast discovery space in timing studies of accretion neutron stars and black holes. The ProtoEXIST2 CZT detector plane consists of 64 of 5 mm thick 2 cm × 2 cm CZT crystals tiled with a minimal gap. MIRAX will consist of 4 such detector planes, each of which will be imaged with its own coded-aperture mask. We present the packaging architecture and assembly procedure of the ProtoEXIST2 detector. On 2012, Oct 10, we conducted a successful high altitude balloon experiment of the ProtoEXIST1 and 2 telescopes, which demonstrates their technology readiness for space application. During the flight both telescopes performed as well as on the ground. We report the results of ground calibration and the initial results for the detector performance in the balloon flight.
Lirman
2000-08-23
Acropora palmata, a branching coral abundant on shallow reef environments throughout the Caribbean, is susceptible to physical disturbance caused by storms. Accordingly, the survivorship and propagation of this species are tied to its capability to recover after fragmentation. Fragments of A. palmata comprised 40% of ramets within populations that had experienced recent storms. While the survivorship of A. palmata fragments was not directly related to the size of fragments, removal of fragments from areas where they settled was influenced by size. Survivorship of fragments was also affected by type of substratum; the greatest mortality (58% loss within the first month) was observed on sand, whereas fragments placed on top of live colonies of A. palmata fused to the underlying tissue and did not experience any losses. Fragments created by Hurricane Andrew on a Florida reef in August 1992 began developing new growth (proto-branches) 7 months after the storm. The number of proto-branches on fragments was dependent on size, but growth was not affected by the size of fragments. Growth-rates of proto-branches increased exponentially with time (1.7 cm year(-1) for 1993-1994, 2.7 cm year(-1) for 1994-1995, 4.2 cm year(-1) for 1995-1996, and 6.5 cm year(-1) for 1996-1997), taking over 4 years for proto-branches to achieve rates comparable to those of adult colonies on the same reef (6.9 cm year(-1)). In addition to the initial mortality and reduced growth-rates, fragmentation resulted in a loss of reproductive potential. Neither colonies that experienced severe fragmentation nor fragments contained gametes until 4 years after the initial damage. Although A. palmata may survive periodic fragmentation, the long-term effects of this process will depend ultimately on the balance between the benefits and costs of this process.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Hrivnak, Bruce J.; Lu, Wenxian; Volk, Kevin
2015-05-20
We have investigated the light variability in a sample of 22 carbon-rich post-AGB stars in the LMC and SMC, based primarily on photometric data from the Optical Gravitational Lensing Experiment survey. All are found to vary. Dominant periods are found in eight of them; these periods range from 49 to 157 days, and most of these stars have F spectral types. These eight are found to be similar to the Milky Way Galaxy (MWG) carbon-rich proto-planetary nebulae (PPNs) in several ways: (a) they are in the same period range of ∼38 to ∼160 days, (b) they have similar spectral types,more » (c) they are (all but one) redder when fainter, (d) they have multiple periods, closely spaced in time, with an average ratio of secondary to primary period of ∼1.0, and as an ensemble, (e) they show a trend of decreasing period with increasing temperature, and (f) they show a trend of decreasing amplitude with decreasing period. However, they possibly differ in that the decreasing trend of period with temperature may be slightly offset from that of the MWG. These eight are classified as PPNs. The other 14 all show evidence of variability on shorter timescales. They are likely hotter PPNs or young planetary nebulae. However, in the MWG the numbers of PPNs peak in the F−G spectral types, while it appears that in the LMC they peak at a hotter B spectral type. One of the periodic ones shows a small, R Coronae Borealis type light curve drop.« less
Improving INPE'S balloon ground facilities for operation of the protoMIRAX experiment
NASA Astrophysics Data System (ADS)
Mattiello-Francisco, F.; Rinke, E.; Fernandes, J. O.; Cardoso, L.; Cardoso, P.; Braga, J.
2014-10-01
The system requirements for reusing the scientific balloon ground facilities available at INPE were a challenge to the ground system engineers involved in the protoMIRAX X-ray astronomy experiment. A significant effort on software updating was required for the balloon ground station. Considering that protoMIRAX is a pathfinder for the MIRAX satellite mission, a ground infrastructure compatible with INPE's satellite operation approach would be useful and highly recommended to control and monitor the experiment during the balloon flights. This approach will make use of the SATellite Control System (SATCS), a software-based architecture developed at INPE for satellite commanding and monitoring. SATCS complies with particular operational requirements of different satellites by using several customized object-oriented software elements and frameworks. We present the ground solution designed for protoMIRAX operation, the Control and Reception System (CRS). A new server computer, properly configured with Ethernet, has extended the existing ground station facilities with switch, converters and new software (OPS/SERVER) in order to support the available uplink and downlink channels being mapped to TCP/IP gateways required by SATCS. Currently, the CRS development is customizing the SATCS for the kernel functions of protoMIRAX command and telemetry processing. Design-patterns, component-based libraries and metadata are widely used in the SATCS in order to extend the frameworks to address the Packet Utilization Standard (PUS) for ground-balloon communication, in compliance with the services provided by the data handling computer onboard the protoMIRAX balloon.
Child with RET proto-oncogene codon 634 mutation.
İnce, Dilek; Demirağ, Bengü; Ataseven, Eda; Oymak, Yeşim; Tuhan, Hale; Karakuş, Osman Zeki; Hazan, Filiz; Abacı, Ayhan; Özer, Erdener; Mutafoglu, Kamer; Olgun, Nur
2017-01-01
İnce D, Demirağ B, Ataseven E, Oymak Y, Tuhan H, Karakuş OZ, Hazan F, Abacı A, Özer E, Mutafoglu K, Olgun N. Child with RET proto-oncogene codon 634 mutation. Turk J Pediatr 2017; 59: 590-593. Herein we reported a 7-year-old child with RET proto-oncogene c634 mutation. Her mother had been diagnosed with medullary thyroid carcinoma (MTC), and treated six years ago. Heterozygous mutation of the RET proto-oncogene at c634 had been detected in her mother. Genetic analysis showed the presence of the same mutation in our patient. Thyroid functions were normal. Serum calcitonin level was found mildly elevated. Parathormone (PTH) and carcinoembrionic antigen (CEA) levels were normal. Prophylactic thyroidectomy and sampling of cervical lymph nodes were performed. Histopathologic examination revealed hyperplasia in thyroid C cells, and reactive lymphadenopathy. The risk of MTC has been reported 100% through the life of patients with RET proto-oncogene mutation. It has been reported that particularly patients with c634 mutation have more risk of occurence of metastatic and progressive/recurrent MTC. Prophylactic `thyroidectomy, cervical lymph node dissection` before 5-years-of-age should be considered for these patients.
First results from the Thomson scattering diagnostic on proto-MPEX.
Biewer, T M; Meitner, S; Rapp, J; Ray, H; Shaw, G
2016-11-01
A Thomson scattering (TS) diagnostic has been successfully implemented on the prototype Material Plasma Exposure eXperiment (Proto-MPEX) at Oak Ridge National Laboratory. The diagnostic collects the light scattered by plasma electrons and spectroscopically resolves the Doppler shift imparted to the light by the velocity of the electrons. The spread in velocities is proportional to the electron temperature, while the total number of photons is proportional to the electron density. TS is a technique used on many devices to measure the electron temperature (T e ) and electron density (n e ) of the plasma. A challenging aspect of the technique is to discriminate the small number of Thomson scattered photons against the large peak of background photons from the high-power laser used to probe the plasma. A variety of methods are used to mitigate the background photons in Proto-MPEX, including Brewster angled windows, viewing dumps, and light baffles. With these methods, first results were measured from argon plasmas in Proto-MPEX, indicating T e ∼ 2 eV and n e ∼ 1 × 10 19 m -3 . The configuration of the Proto-MPEX TS diagnostic will be described and plans for improvement will be given.
First results from the Thomson scattering diagnostic on Proto-MPEX
DOE Office of Scientific and Technical Information (OSTI.GOV)
Biewer, Theodore M; Meitner, Steven J; Rapp, Juergen
2016-01-01
A Thomson scattering diagnostic has been successfully implemented on the prototype Material Plasma Exposure eXperiment (Proto-MPEX) at Oak Ridge National Laboratory. The diagnostic collects the light scattered by plasma electrons and spectroscopically resolves the Doppler shift imparted to the light by the velocity of the electrons. The spread in velocities is proportional to the electron temperature, while the total number of photons is proportional to the electron density. Thomson scattering is a technique used on many devices to measure the electron temperature (Te) and electron density (ne) of the plasma. A challenging aspect of the technique is to discriminate themore » small number of Thomson scattered photons against the large peak of background photons from the high-power laser used to probe the plasma. A variety of methods are used to mitigate the background photons in Proto-MPEX, including Brewster angled windows, viewing dumps, and light baffles. With these methods, first results were measured from Argon plasmas in Proto-MPEX, indicating Te ~ 2 eV and ne ~ 1x1019 m-3. The configuration of the Proto-MPEX Thomson scattering diagnostic will be described and plans for improvement will be given.« less
Arasu, Abirami; Kumaresan, Venkatesh; Sathyamoorthi, Akila; Chaurasia, Mukesh Kumar; Bhatt, Prasanth; Gnanam, Annie J; Palanisamy, Rajesh; Marimuthu, Kasi; Pasupuleti, Mukesh; Arockiaraj, Jesu
2014-11-01
In this study, we reported a molecular characterization of a novel proto-type galectin-1 from the striped murrel Channa striatus (named as CsGal-1). The full length CsGal-1 was identified from an established striped murrel cDNA library and further we confirmed the sequence by cloning. The complete cDNA sequence of CsGal-1 is 590 base pairs (bp) in length and its coding region encoded a poly peptide of 135 amino acids. The polypeptide contains a galactoside binding lectin domain at 4-135. The domain carries a sugar binding site at 45-74 along with its signatures (H(45)-X-Asn(47)-X-Arg(49) and Trp(69)-X-X-Glu(72)-X-Arg(74)). CsGal-1 shares a highly conserved carbohydrate recognition domain (CRD) with galectin-1 from other proto-type galectin of teleosts. The mRNA expressions of CsGal-1 in healthy and various immune stimulants including Aphanomyces invadans, Aeromonas hydrophila, Escherchia coli lipopolysaccharide and poly I:C injected tissues of C. striatus were examined using qRT-PCR. CsGal-1 mRNA is highly expressed in kidney and is up-regulated with different immune stimulants at various time points. To understand its biological activity, the coding region of CsGal-1 gene was expressed in an E. coli BL21 (DE3) cloning system and its recombinant protein was purified. The recombinant CsGal-1 protein was agglutinated with mouse erythrocytes at a concentration of 4μg/mL in a calcium independent manner. CsGal-1 activity was inhibited by d-galactose at 25mM(-1) and d-glucose and d-fructose at 100mM(-1). The results of microbial binding assay showed that the recombinant CsGal-1 protein agglutinated only with the Gram-negative bacteria. Interestingly, we observed no agglutination against Gram-positive bacteria. Overall, the study showed that CsGal-1 is an important immune gene involved in the recognition and elimination of pathogens in C. striatus. Copyright © 2014 Elsevier GmbH. All rights reserved.
A survey for PAH emission in H II regions, planetary and proto-planetary nebulae
NASA Technical Reports Server (NTRS)
Demuizon, M.; Cox, P.; Lequeux, J.
1989-01-01
The results of a systematic investigation of polycyclic aromatic hydrocarbon (PAH) emission in H II regions, planetary nebulae (PN), and proto-planetary nebulae (PNN), are reported. Data is obtained from the low resolution spectra (LRS) of IRAS. The results show that: PAHs are formed in carbon rich objects; and PAH emission is ubiquitous in general interstellar medium and requires the presence of ultraviolet photons, in planetary and proto-planetary nebulae, PAH emission is seen only where an ionizing flux is present and in carbon rich objects.
OXIDIZING PROTO-ATMOSPHERE ON TITAN: CONSTRAINT FROM N{sub 2} FORMATION BY IMPACT SHOCK
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ishimaru, Ryo; Matsui, Takafumi; Sekine, Yasuhito
2011-11-01
Titan is the only satellite that possesses a thick atmosphere, composed mainly of N{sub 2} and CH{sub 4}. However, its origin and evolution remain largely unknown. Knowledge of the acquirement of a N{sub 2} atmosphere on Titan would provide insights into nitrogen evolution in planetary atmospheres as well as the formation of satellite systems around gas giants. Previous studies have proposed that the atmospheric N{sub 2} would have been converted from NH{sub 3} via shock heating by accreting satellitesimals in the highly reducing proto-atmosphere composed of NH{sub 3} and CH{sub 4}. Nevertheless, the validity of this mechanism strongly depends onmore » both the composition of the proto-atmosphere and kinetics of shock chemistry. Here, we show that a CO{sub 2}-rich oxidizing proto-atmosphere is necessary to form N{sub 2} from NH{sub 3} efficiently by atmospheric shock heating. Efficient shock production of N{sub 2} is inhibited in a reducing proto-atmosphere composed of NH{sub 3} and CH{sub 4}, because CH{sub 4} plays as the coolant gas owing to its large heat capacity. Our calculations show that the amount of N{sub 2} produced in a CO{sub 2}-rich proto-atmosphere could have reached {approx}20 times that on the present Titan. Although further quantitative analysis are required (especially, the occurrence of catalytic reactions), our results imply that the chemical composition of satellitesimals that formed the Saturnian system is required to be oxidizing if the current atmospheric N{sub 2} is derived from the shock heating in the proto-atmosphere during accretion. This supports the formation of regular satellites in an actively supplied circumplanetary disk using CO{sub 2}-rich materials originated from the solar nebula at the final stage of gas giant formation.« less
Vacuum boilers developed heating surfaces technic and economic efficiency evaluation
NASA Astrophysics Data System (ADS)
Slobodina, E. N.; Mikhailov, A. G.; Semenov, B. A.
2018-01-01
The vacuum boilers as manufacturing proto types application analysis was carried out, the possible directions for the heating surfaces development are identified with a view to improving the energy efficiency. Economic characteristics to evaluate the vacuum boilers application efficiency (Net Discounted Income (NDI), Internal Rate of Return (IRR), Profitability Index (PI) and Payback Period) are represented. The given type boilers application technic and economic efficiency criteria were established. NDI changing curves depending on the finning coefficient and operating pressure were obtained as a result of the conducted calculation studies.
A proto-code of ethics and conduct for European nurse directors.
Stievano, Alessandro; De Marinis, Maria Grazia; Kelly, Denise; Filkins, Jacqueline; Meyenburg-Altwarg, Iris; Petrangeli, Mauro; Tschudin, Verena
2012-03-01
The proto-code of ethics and conduct for European nurse directors was developed as a strategic and dynamic document for nurse managers in Europe. It invites critical dialogue, reflective thinking about different situations, and the development of specific codes of ethics and conduct by nursing associations in different countries. The term proto-code is used for this document so that specifically country-orientated or organization-based and practical codes can be developed from it to guide professionals in more particular or situation-explicit reflection and values. The proto-code of ethics and conduct for European nurse directors was designed and developed by the European Nurse Directors Association's (ENDA) advisory team. This article gives short explanations of the code' s preamble and two main parts: Nurse directors' ethical basis, and Principles of professional practice, which is divided into six specific points: competence, care, safety, staff, life-long learning and multi-sectorial working.
Lodestone: Nature's own permanent magnet
NASA Technical Reports Server (NTRS)
Wasilewski, P.
1976-01-01
Magnetic hysteresis and microstructural details are presented which explain why the class of magnetic iron ores defined as proto-lodestones, can behave as permanent magnets, i.e. lodestones. Certain of these proto-lodestones which are not permanent magnets can be made into permanent magnets by charging in a field greater than 1000 oersted. This fact, other experimental observations, and field evidence from antiquity and the middle ages, which seems to indicate that lodestones are found as localized patches within massive ore bodies, suggests that lightning might be responsible for the charging of lodestones. The large remanent magnetization, high values of coercive force, and good time stability for the remanent magnetization are all characteristics of proto-lodestone iron ores which behave magnetically as fine scale ( 10 micrometer) intergrowths when subjected to magnetic hysteresis analysis. The magnetic results are easily understood by analysis of the complex proto lodestone microstructural patterns observable at the micrometer scale and less.
The scenario on the origin of translation in the RNA world: in principle of replication parsimony
2010-01-01
Background It is now believed that in the origin of life, proteins should have been "invented" in an RNA world. However, due to the complexity of a possible RNA-based proto-translation system, this evolving process seems quite complicated and the associated scenario remains very blurry. Considering that RNA can bind amino acids with specificity, it has been reasonably supposed that initial peptides might have been synthesized on "RNA templates" containing multiple amino acid binding sites. This "Direct RNA Template (DRT)" mechanism is attractive because it should be the simplest mechanism for RNA to synthesize peptides, thus very likely to have been adopted initially in the RNA world. Then, how this mechanism could develop into a proto-translation system mechanism is an interesting problem. Presentation of the hypothesis Here an explanation to this problem is shown considering the principle of "replication parsimony" --- genetic information tends to be utilized in a parsimonious way under selection pressure, due to its replication cost (e.g., in the RNA world, nucleotides and ribozymes for RNA replication). Because a DRT would be quite long even for a short peptide, its replication cost would be great. Thus the diversity and the length of functional peptides synthesized by the DRT mechanism would be seriously limited. Adaptors (proto-tRNAs) would arise to allow a DRT's complementary strand (called "C-DRT" here) to direct the synthesis of the same peptide synthesized by the DRT itself. Because the C-DRT is a necessary part in the DRT's replication, fewer turns of the DRT's replication would be needed to synthesize definite copies of the functional peptide, thus saving the replication cost. Acting through adaptors, C-DRTs could transform into much shorter templates (called "proto-mRNAs" here) and substitute the role of DRTs, thus significantly saving the replication cost. A proto-rRNA corresponding to the small subunit rRNA would then emerge to aid the binding of proto-tRNAs and proto-mRNAs, allowing the reduction of base pairs between them (ultimately resulting in the triplet anticodon/codon pair), thus further saving the replication cost. In this context, the replication cost saved would allow the appearance of more and longer functional peptides and, finally, proteins. The hypothesis could be called "DRT-RP" ("RP" for "replication parsimony"). Testing the hypothesis The scenario described here is open for experimental work at some key scenes, including the compact DRT mechanism, the development of adaptors from aa-aptamers, the synthesis of peptides by proto-tRNAs and proto-mRNAs without the participation of proto-rRNAs, etc. Interestingly, a recent computer simulation study has demonstrated the plausibility of one of the evolving processes driven by replication parsimony in the scenario. Implication of the hypothesis An RNA-based proto-translation system could arise gradually from the DRT mechanism according to the principle of "replication parsimony" --- to save the replication cost of RNA templates for functional peptides. A surprising side deduction along the logic of the hypothesis is that complex, biosynthetic amino acids might have entered the genetic code earlier than simple, prebiotic amino acids, which is opposite to the common sense. Overall, the present discussion clarifies the blurry scenario concerning the origin of translation with a major clue, which shows vividly how life could "manage" to exploit potential chemical resources in nature, eventually in an efficient way over evolution. Reviewers This article was reviewed by Eugene V. Koonin, Juergen Brosius, and Arcady Mushegian. PMID:21110883
Direct measurement of the transition from edge to core power coupling in a light-ion helicon source
NASA Astrophysics Data System (ADS)
Piotrowicz, P. A.; Caneses, J. F.; Showers, M. A.; Green, D. L.; Goulding, R. H.; Caughman, J. B. O.; Biewer, T. M.; Rapp, J.; Ruzic, D. N.
2018-05-01
We present time-resolved measurements of an edge-to-core power transition in a light-ion (deuterium) helicon discharge in the form of infra-red camera imaging of a thin stainless steel target plate on the Proto-Material Exposure eXperiment device. The time-resolved images measure the two-dimensional distribution of power deposition in the helicon discharge. The discharge displays a mode transition characterized by a significant increase in the on-axis electron density and core power coupling, suppression of edge power coupling, and the formation of a fast-wave radial eigenmode. Although the self-consistent mechanism that drives this transition is not yet understood, the edge-to-core power transition displays characteristics that are consistent with the discharge entering a slow-wave anti-resonant regime. RF magnetic field measurements made across the plasma column, together with the power deposition results, provide direct evidence to support the suppression of the slow-wave in favor of core plasma production by the fast-wave in a light-ion helicon source.
Direct measurement of the transition from edge to core power coupling in a light-ion helicon source
Piotrowicz, Pawel A.; Caneses, Juan F.; Showers, Melissa A.; ...
2018-05-02
Here, we present time-resolved measurements of an edge-to-core power transition in a light-ion (deuterium) helicon discharge in the form of infra-red camera imaging of a thin stainless steel target plate on the Proto-Material Exposure eXperiment device. The time-resolved images measure the two-dimensional distribution of power deposition in the helicon discharge. The discharge displays a mode transition characterized by a significant increase in the on-axis electron density and core power coupling, suppression of edge power coupling, and the formation of a fast-wave radial eigenmode. Although the self-consistent mechanism that drives this transition is not yet understood, the edge-to-core power transition displaysmore » characteristics that are consistent with the discharge entering a slow-wave anti-resonant regime. RF magnetic field measurements made across the plasma column, together with the power deposition results, provide direct evidence to support the suppression of the slow-wave in favor of core plasma production by the fast-wave in a light-ion helicon source.« less
Direct measurement of the transition from edge to core power coupling in a light-ion helicon source
DOE Office of Scientific and Technical Information (OSTI.GOV)
Piotrowicz, Pawel A.; Caneses, Juan F.; Showers, Melissa A.
Here, we present time-resolved measurements of an edge-to-core power transition in a light-ion (deuterium) helicon discharge in the form of infra-red camera imaging of a thin stainless steel target plate on the Proto-Material Exposure eXperiment device. The time-resolved images measure the two-dimensional distribution of power deposition in the helicon discharge. The discharge displays a mode transition characterized by a significant increase in the on-axis electron density and core power coupling, suppression of edge power coupling, and the formation of a fast-wave radial eigenmode. Although the self-consistent mechanism that drives this transition is not yet understood, the edge-to-core power transition displaysmore » characteristics that are consistent with the discharge entering a slow-wave anti-resonant regime. RF magnetic field measurements made across the plasma column, together with the power deposition results, provide direct evidence to support the suppression of the slow-wave in favor of core plasma production by the fast-wave in a light-ion helicon source.« less
Strong Central Asian seasonality from Eocene oysters indicates early monsoons and aridification
NASA Astrophysics Data System (ADS)
Bougeois, Laurie; de Rafélis, Marc; Tindall, Julia; Proust, Jean-Noël; Reichart, Gert-Jan; de Nooijer, Lennart; Guo, ZhaoJie; Ormukov, Cholponbek; Dupont-Nivet, Guillaume
2017-04-01
Climate models suggest that the onset of Asian monsoons and aridification have been governed by Tibetan plateau uplift, global climate changes and the retreat to the west of the vast epicontinental Proto-Paratethys sea during the warm Eocene greenhouse period (55-34 million years ago). However, the role of the Proto-Paratethys sea on climate remains to be quantified by accurate and precise reconstructions. By applying a novel intra-annual geochemical multi-proxy methodology on Eocene oyster shells of the Proto-Paratethys sea and comparing results to climate simulations and sedimentology analyses, we show that the Central Asian region was generally arid with a high seasonal contrast characterized by hot and arid summers and wetter winters. Hotter and more arid summers despite the presence of the Proto-Paratethys may be explained by warmer Eocene global conditions with a strong anticyclonic Hadley cell descending at Central Asian latitudes and a stronger Foehn effect from the emerging Tibetan Plateau to the south. This implies that the shallow sea did not have a strong dampening thermal effect on the monsoonal circulation in contrast to previous circulation models results but in agreement with recent evidence for Eocene summer monsoons. Enhanced winter precipitations, relative to modern, is linked to a westerly moisture source coming from the Proto-Paratethys sea at that time. Additional bulk sediment stable isotope data from marine limestones and pedogenic carbonates suggest a gradual decrease in this westerly moisture source, which is in line with the retreat of the Proto-Paratethys followed by the Oligo-Miocene orogeny of the Central Asian ranges (Tian Shan and Pamir) shielding the westerlies.
Formation of Bipolar Lobes by Jets
NASA Astrophysics Data System (ADS)
Soker, Noam
2002-04-01
I conduct an analytical study of the interaction of jets, or a collimated fast wind (CFW), with a previously blown asymptotic giant branch (AGB) slow wind. Such jets (or CFWs) are supposedly formed when a compact companion, a main-sequence star, or a white dwarf accretes mass from the AGB star, forms an accretion disk, and blows two jets. This type of flow, which I think shapes bipolar planetary nebulae (PNs), requires three-dimensional gasdynamical simulations, which are limited in the parameter space they can cover. By imposing several simplifying assumptions, I derive simple expressions which reproduce some basic properties of lobes in bipolar PNs and which can be used to guide future numerical simulations. I quantitatively apply the results to two proto-PNs. I show that the jet interaction with the slow wind can form lobes which are narrow close to, and far away from, the central binary system, and which are wider somewhere in between. Jets that are recollimated and have constant cross section can form cylindrical lobes with constant diameter, as observed in several bipolar PNs. Close to their source, jets blown by main-sequence companions are radiative; only further out they become adiabatic, i.e., they form high-temperature, low-density bubbles that inflate the lobes.
Where Have All the Nunn-McCurdys Gone
2015-12-01
trickier than coming up with root causes of problems. While opinions abound, it is difficult to ascertain that a given action or set of actions is...change that has been lauded by most defense experts as extremely positive. WSARA made sweeping changes that have strengthened ac- countability of...prior to MS B, and measures to ensure adequate competition, including competitive proto- typing, dual sourcing, and modular open architectures, among
An Airborne Millimeter-Wave FM-CW Radar for Thickness Profiling of Freshwater Ice
1992-11-01
commercial and recreational application, including safety and trafficability surveys. A proto- type broadband millimeter wave (26.5 to 40 GHz) Frequency...and utility for ice safety and traffica- appropriate antenna for transmission. Morey (1974) bility studies. Other important applications include...resolution and a 2.7- which can provide reliable safety survey profiling for GHz center frequency, that is capable of airborne pro- the entire practical
The Single-Phase ProtoDUNE Technical Design Report
DOE Office of Scientific and Technical Information (OSTI.GOV)
Abi, B.
2017-06-21
ProtoDUNE-SP is the single-phase DUNE Far Detector prototype that is under construction and will be operated at the CERN Neutrino Platform (NP) starting in 2018. ProtoDUNE-SP, a crucial part of the DUNE effort towards the construction of the first DUNE 10-kt fiducial mass far detector module (17 kt total LAr mass), is a significant experiment in its own right. With a total liquid argon (LAr) mass of 0.77 kt, it represents the largest monolithic single-phase LArTPC detector to be built to date. It's technical design is given in this report.
Emotional contagion and proto-organizing in human interaction dynamics
Hazy, James K.; Boyatzis, Richard E.
2015-01-01
This paper combines the complexity notions of phase transitions and tipping points with recent advances in cognitive neuroscience to propose a general theory of human proto-organizing. It takes as a premise that a necessary prerequisite for organizing, or “proto-organizing,” occurs through emotional contagion in subpopulations of human interaction dynamics in complex ecosystems. Emotional contagion is posited to engender emotional understanding and identification with others, a social process that acts as a mechanism that enables (or precludes) cooperative responses to opportunities and risks. Propositions are offered and further research is suggested. PMID:26124736
Power accounting of plasma discharges in the linear device Proto-MPEX
NASA Astrophysics Data System (ADS)
Showers, M.; Piotrowicz, P. A.; Beers, C. J.; Biewer, T. M.; Caneses, J.; Canik, J.; Caughman, J. B. O.; Donovan, D. C.; Goulding, R. H.; Lumsdaine, A.; Kafle, N.; Owen, L. W.; Rapp, J.; Ray, H.
2018-06-01
Plasma material interaction (PMI) studies are crucial to the successful development of future fusion reactors. Prototype Material Plasma Exposure eXperiment (Proto-MPEX) is a prototype design for the MPEX, a steady-state linear device being developed to study PMI. The primary purpose of Proto-MPEX is developing the plasma heating source concepts for MPEX. A power accounting study of Proto-MPEX works to identify machine operating parameters that could improve its performance, thereby increasing its PMI research capabilities, potentially impacting the MPEX design concept. To build a comprehensive power balance, an analysis of the helicon region has been performed implementing a diagnostic suite and software modeling to identify mechanisms and locations of heat loss from the main plasma. Of the 106.3 kW of input power, up to 90.5% of the power has been accounted for in the helicon region. When the analysis was extended to encompass the device to its end plates, 49.2% of the input power was accounted for and verified diagnostically. Areas requiring further diagnostic analysis are identified. The required improvements will be implemented in future work. The data acquisition and analysis processes will be streamlined to form a working model for future power balance studies of Proto-MPEX. ).
First results from the Thomson scattering diagnostic on proto-MPEX
DOE Office of Scientific and Technical Information (OSTI.GOV)
Biewer, T. M., E-mail: biewertm@ornl.gov; Meitner, S.; Rapp, J.
2016-11-15
A Thomson scattering (TS) diagnostic has been successfully implemented on the prototype Material Plasma Exposure eXperiment (Proto-MPEX) at Oak Ridge National Laboratory. The diagnostic collects the light scattered by plasma electrons and spectroscopically resolves the Doppler shift imparted to the light by the velocity of the electrons. The spread in velocities is proportional to the electron temperature, while the total number of photons is proportional to the electron density. TS is a technique used on many devices to measure the electron temperature (T{sub e}) and electron density (n{sub e}) of the plasma. A challenging aspect of the technique is tomore » discriminate the small number of Thomson scattered photons against the large peak of background photons from the high-power laser used to probe the plasma. A variety of methods are used to mitigate the background photons in Proto-MPEX, including Brewster angled windows, viewing dumps, and light baffles. With these methods, first results were measured from argon plasmas in Proto-MPEX, indicating T{sub e} ∼ 2 eV and n{sub e} ∼ 1 × 10{sup 19} m{sup −3}. The configuration of the Proto-MPEX TS diagnostic will be described and plans for improvement will be given.« less
H2 Imaging of Three Proto-Planetary and Young Planetary Nebulae
NASA Astrophysics Data System (ADS)
Volk, Kevin; Hrivnak, Bruce J.; Kwok, Sun
2004-12-01
High-resolution (0.15") 2.12 μm H2 and narrowband K images have been obtained of one cool proto-planetary nebula, IRAS 20028+3910, and two hot proto-planetary/young planetary nebulae, IRAS 19306+1407 and IRAS 22023+5249. The observations were made with an adaptive optics system and near-infrared imager on the Gemini North 8 m telescope. All three nebulae are seen to be extended, and in two and possibly all three of them H2 is found to be emitting from bipolar lobes. In IRAS 19306+1407, H2 emission is seen arising from a ring close to the star and from the edges of emerging bipolar lobes. In IRAS 20028+3910, one bright lobe and a very faint second lobe are seen in the H2 and K-band images, similar to the published visible images, but in the H2 and K-band images a faint filament appears to connect the two lobes. The central star is not seen in IRAS 20028+3910, indicating that the nebula is optically thick even at 2 μm, which is unusual. The images suggest that extended H2 emission is often the manifestation of fast-slow wind interactions in the bipolar lobes. The paper is based on observations obtained at the Gemini Observatory with the Adaptive Optics System Hokupa'a/QUIRC, developed and operated by the University of Hawaii Adaptive Optics Group, with support from the National Science Foundation. The Gemini Observatory is operated by the Association of Universities for Research in Astronomy, Inc., under a cooperative agreement with the NSF on behalf of the Gemini partnership: the National Science Foundation (United States), the Particle Physics and Astronomy Research Council (United Kingdom), the National Research Council (Canada), Comisión Nacional de Investigación Científica y Tecnológica (CONICYT; Chile), the Australian Research Council (Australia), Laboratório Nacional de Astrofísica (CNPq; Brazil), and Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET; Argentina).
On the statistics of proto-cluster candidates detected in the Planck all-sky survey
NASA Astrophysics Data System (ADS)
Negrello, M.; Gonzalez-Nuevo, J.; De Zotti, G.; Bonato, M.; Cai, Z.-Y.; Clements, D.; Danese, L.; Dole, H.; Greenslade, J.; Lapi, A.; Montier, L.
2017-09-01
Observational investigations of the abundance of massive precursors of local galaxy clusters ('proto-clusters') allow us to test the growth of density perturbations, to constrain cosmological parameters that control it, to test the theory of non-linear collapse and how the galaxy formation takes place in dense environments. The Planck collaboration has recently published a catalogue of ≳2000 cold extragalactic sub-millimeter sources, I.e. with colours indicative of z ≳ 2, almost all of which appear to be overdensities of star-forming galaxies. They are thus considered as proto-cluster candidates. Their number densities (or their flux densities) are far in excess of expectations from the standard scenario for the evolution of large-scale structure. Simulations based on a physically motivated galaxy evolution model show that essentially all cold peaks brighter than S545GHz = 500 mJy found in Planck maps after having removed the Galactic dust emission can be interpreted as positive Poisson fluctuations of the number of high-z dusty proto-clusters within the same Planck beam, rather then being individual clumps of physically bound galaxies. This conclusion does not change if an empirical fit to the luminosity function of dusty galaxies is used instead of the physical model. The simulations accurately reproduce the statistic of the Planck detections and yield distributions of sizes and ellipticities in qualitative agreement with observations. The redshift distribution of the brightest proto-clusters contributing to the cold peaks has a broad maximum at 1.5 ≤ z ≤ 3. Therefore follow-up of Planck proto-cluster candidates will provide key information on the high-z evolution of large scale structure.
NASA Technical Reports Server (NTRS)
Stuermer, D. H.; Peters, K. E.; Kaplan, I. R.
1978-01-01
Stable isotope ratios of C, N and H, elemental compositions, and electron spin resonance (ESR) data of humic acids and proto-kerogens from twelve widely varying sampling locations are presented. Humic acids and proto-kerogens from algal sources are more aliphatic and higher in N than those from higher plant sources. Oxygen content appears to represent a measure of maturation, even in Recent sediments, and S content may reflect redox conditions in the environment of deposition. The ESR data indicate that the transformation of humic substances to proto-kerogens in Recent sediments is accompanied by an increase in aromatic character. A combination of stable carbon isotope ratio and H/C ratio may be a simple but reliable source indicator which allows differentiation of marine-derived from terrestrially-derived organic matter. The stable nitrogen isotope ratios are useful indicators of nitrogen nutrient source. Deuterium/hydrogen isotope ratios appear to reflect variations in meteoric waters and are not reliable source indicators.
Grasping and fingering (active or haptic touch) in healthy newborns.
Adamson-Macedo, Elvidina Nabuco; Barnes, Christopher R
2004-12-01
The traditional view that the activity of the baby's hands are triggered by a stimulus in an automatic, compulsory, stereotyped way and persisting view that fingering does not occur prior to 4 months of age, have led perception researchers to the assumption that the processing, encoding, and retainment of sensory information could not take place through the manual mode. This study aims to investigate whether fingering and different types of grasping occur before 3 months of age and can be modulated by surface texture of three objects. Using naturalistic observations, this small sample developmental study applied the AB experimental design to achieve aims above. Babies were video taped every week for 12 weeks. Three special manual stimuli were developed for this study. Focal sampling method with either zero-sampling or instantaneous sampling recording rules were used to analyse data with the Observer Video Pro. Each session comprising baseline and 3 experimental conditions lasted for four minutes. Fingering or 'proto fingering' as it is suggested in this article emerges as early as the first week of postnatal life; texture of a handled object modulates both 'proto-palm' and hand-grasp behaviour of healthy newborns. Results suggest that texture also modulates 'proto-fingering' and challenge persisting current assumption that fingering does not occur before four months of age, and further validates the phrase 'neo-haptic' touch to describe hands-on exploration of the newborn. The author suggests that some 'mental representation' of the stimulus is present during 'neo-haptic' recognition of the objects which is in accordance to a constructivist approach to (touch) perception.
Program Manager: Modeling and Simulation Feature Issue, September - October 1997
1997-10-01
with the creations of Walt Disney . The Department of Defense (DoD) is the fortunate benefi- ciary of a concentration of modeling and simulation (M&S...exploration. For example, STRICOM and the Walt Disney Company, the premier expert on the use of M&S in the entertain- ment industry, have an...the start ; • emphasize prevention over cures by using virtual proto- types and simulations to identi- fy and resolve problems early; and
Development of Deployable Elastic Composite Shape Memory Alloy Reinforced (DECSMAR) Structures
2006-05-01
battens nest. To mitigate the compromise of deployed performance due to the hinge cross-section, Nitinol SMA wires can be embedded in the composite...proportional limit by slip or conventional plastic deformation. As a logistics example, the particular Nitinol alloy used for proto-typing has...Memory Alloys,” Johnson Matthey, 2004. 10Cross, WB, Kariotis, AH, & Stimler, FJ, “ Nitinol Characterization Study,” NASA CR-1433, 1970. 11Proft, JL
Defense Resource Management Study
1979-02-01
exploit the fabrication and testing of experimental and proto- type hardware; it should not be permitted to increase reliance on design studies and... Nuclear Forces C. Forces for NATO D. Forces for Asia and the Pacific E. Forces for the Middle Ejst F. Forces for the Persian Gulf G. Theater... Nuclear Forces H. 1. J. General Purpose Forces Mobility Forces Land Forces K. Tactical Air Forces L. Use of U.S. Naval Forces for the Defense M
SMA Spectral Line Survey of the Proto-Planetary Nebula CRL 618
NASA Astrophysics Data System (ADS)
Patel, Nimesh A.; Gottlieb, Carl; Young, Ken; Kaminski, Tomasz Tomek; McCarthy, Michael; Menten, Karl; Primiani, Rurik; Lee, Chin-Fei; Gupta, Harshal
2018-01-01
Carbon-rich Asymptotic Giant Branch (AGB) stars are major sources of gas and dust in the interstellar medium. AGB stars remain in their evolutionary stage for 1 to 10 Myrs, during which they have very high mass loss rates that increase at the end. During the brief (~1000 yr) period in the evolution from the AGB to the Planetary Nebula (PN) stage there are dramatic changes in the morphology from nearly spherical symmetry, to bipolar, quadrupolar and more complex structures, with the development of both slow and fast (100 km/s) outflows. The molecular composition of these objects' cirumstellar envelopes also evolves from being similar to that of parent AGB star (mainly diatomic and small polyatomic species), to more complex molecules (including ions).We have started an observational study of a sample of Proto-Planetary nebulae (PPN) with the Submillimeter Array to carry out spectral-line surveys of ~60 GHz frequency coverage in the 345 GHz band (similar to our published IRC+10216 line survey of 2011). Here we present preliminary results from the line survey of the carbon-rich PPN CRL 618, covering a frequency range of 281.9 to 359.4 GHz. Observations were carried out in January 2016 and September 2017, with the SMA in compact (3" angular resolution) and very extended (0.5") configurations, respectively.More than 1100 lines were detected in CRL 618. The majority of them can be attributed to HC3N and c-C3H2, and their isotopologues. About 350 lines are as yet unassigned. The continuum emission is unresolved even at 0.5" resolution. Several hydrogen recombination lines are detected from the central HII region. Lines of CO, HCO+, CS show the fast outflow wings, while the majority of molecular emission arises from a compact region of about 1" diameter. We present LTEmodeling and rotation temperature diagram analysis of HC3N, c-C3H2, CH3CN, and their isotopologues. We plan to observe another PPN, CRL 2688 with the SMA in 2018. Together, these imaging line surveys will provide observational constraints on models of the chemical evolution from AGB stars to Planetary Nebulae.
Traits regionaux en protoroman (Regional Traits in Proto-Romance).
ERIC Educational Resources Information Center
De Dardel, Robert
2001-01-01
Every spoken linguistic system shared by a community has structurally related regional variants. For example, the variant of the present day French for "soixante-dix" is "septante" in eastern France, Belgium, and the French-speaking community of Switzerland. This suggests that Proto-Romance has regionalisms. Using the…
Mothers' Labeling Responses to Infants' Gestures Predict Vocabulary Outcomes
ERIC Educational Resources Information Center
Olson, Janet; Masur, Elise Frank
2015-01-01
Twenty-nine infants aged 1;1 and their mothers were videotaped while interacting with toys for 18 minutes. Six experimental stimuli were presented to elicit infant communicative bids in two communicative intent contexts--proto-declarative and proto-imperative. Mothers' verbal responses to infants' gestural and non-gestural communicative bids were…
Helicon plasma ion temperature measurements and observed ion cyclotron heating in proto-MPEX
NASA Astrophysics Data System (ADS)
Beers, C. J.; Goulding, R. H.; Isler, R. C.; Martin, E. H.; Biewer, T. M.; Caneses, J. F.; Caughman, J. B. O.; Kafle, N.; Rapp, J.
2018-01-01
The Prototype-Material Plasma Exposure eXperiment (Proto-MPEX) linear plasma device is a test bed for exploring and developing plasma source concepts to be employed in the future steady-state linear device Material Plasma Exposure eXperiment (MPEX) that will study plasma-material interactions for the nuclear fusion program. The concept foresees using a helicon plasma source supplemented with electron and ion heating systems to reach necessary plasma conditions. In this paper, we discuss ion temperature measurements obtained from Doppler broadening of spectral lines from argon ion test particles. Plasmas produced with helicon heating alone have average ion temperatures downstream of the Helicon antenna in the range of 3 ± 1 eV; ion temperature increases to 10 ± 3 eV are observed with the addition of ion cyclotron heating (ICH). The temperatures are higher at the edge than the center of the plasma either with or without ICH. This type of profile is observed with electrons as well. A one-dimensional RF antenna model is used to show where heating of the plasma is expected.
Roadside Tracker Portal-less Portal Monitor
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ziock, Klaus-Peter; Cheriyadat, Anil M.; Bradley, Eric Craig
2013-07-01
This report documents the full development cycle of the Roadside Tracker (RST) Portal-less Portal monitor (Fig. 1) funded by DHS DNDO. The project started with development of a proof-of-feasibility proto-type, proceeded through design and construction of a proof-of-concept (POC) prototype, a test-and-evaluation phase, participation in a Limited Use Exercise that included the Standoff Radiation Detections Systems developed under an Advanced Technology Demonstration and concluded with participation in a Characterization Study conducted by DNDO.
ONRASIA Scientific Information Bulletin, Volume 17, Number 2, April/June 1992
1992-06-01
studying the role of overcomplete- Tel: +81-422-59-4201 seminar on wavelets was chosen to be ness properties and their applications Fax: +81-422-59-3393...technologies, explore interactive environment for man- to emulate various types of cache proto- applications, and study how theycan be machine interface...cols. The Keio professors specifically integrated. Flexible integration is seen want to study the kind of logic simula- as an important goal in order for
Federal Register 2010, 2011, 2012, 2013, 2014
2010-06-03
... Satellite from the Baikonur Cosmodrome in Kazakhstan. The United States Government is prepared to license... support the transfer of the ProtoStarII satellite Commercial Communication Satellite from ProtoStar Satellite Systems, Inc., Bermuda to SES Satellite Leasing Limited, Isle of Man, British Isles. The United...
Eliciting Proto-Imperatives and Proto-Declaratives in Children with Intellectual Disabilities
ERIC Educational Resources Information Center
Vandereet, Joke; Maes, Bea; Lembrechts, Dirk; Zink, Inge
2010-01-01
Background: Although high-structured elicitation tasks have been shown to be efficient means to sample communication in children with intellectual disabilities, their validity and reliability remain to be evaluated. The aims of this study were threefold: (i) to evaluate the eliciting potential, (ii) to examine the utterance forms of…
The Relationship between Polish and Other Slavic Languages.
ERIC Educational Resources Information Center
Birkenmayer, Sigmund S.
This paper discusses the relationship of Polish to the other languages considered to be within the Slavic group. The comparison is mainly phonological and considers the Proto-Slavic features still preserved in Polish as well as the distinctive features of Polish which have developed from Proto-Slavic. The development of vowels and consonants is…
Erotic Love and the Development of Proto-Capitalist Ideology in Early Modern Comedy
ERIC Educational Resources Information Center
Damsen, Silver
2009-01-01
My dissertation, "Erotic Love and the Development of Proto-Capitalist Ideology in Early Modern Comedy" demonstrates how increased crown authority, and an expanded market combine with the mixed agency of the romantic comedy daughter to further encourage early modern economic growth. The triumph of rebelling daughter over blocking father has…
Proto-industrialization, sharecropping, and outmigration in nineteenth-century rural Westphalia.
Anderson, T G
2001-01-01
This article examines proto-industrialization and the social relations of production in a rural parish in eastern Westphalia that experienced large-scale outmigration to the American Midwest in the mid-nineteenth century. Relying on local and individual-level Prussian tax and emigration records, the study identifies and analyses the socio-economic background of the migrant cohort in terms of proto-industrial activity and peasant economy. Preceded by the downfall of domestic textile industries due to British industrial competition, outmigration was highly selective, drawing individuals from specific socio-economic niches. Landless sharecroppers - linked by debt and labour obligations to better-off peasants and landlords - were underrepresented in the migration, while smallholding peasants and day-labourers - 'free' to commodify their labour power through the sale of home-produced textile products or seasonal migratory labour - were overrepresented. The findings of the study have implications for an understanding of the localized nature of the relations of production in proto-industrial regions, the historical nature of German emigrations, and the dynamics of the German transition to industrial capitalism in the nineteenth century.
NASA Astrophysics Data System (ADS)
Owen, L. W.; Rapp, J.; Canik, J.; Lore, J. D.
2017-11-01
Data-constrained interpretative analyses of plasma transport in convection dominated helicon discharges in the Proto-MPEX linear device, and predictive calculations with additional Electron Cyclotron Heating/Electron Bernstein Wave (ECH/EBW) heating, are reported. The B2.5-Eirene code, in which the multi-fluid plasma code B2.5 is coupled to the kinetic Monte Carlo neutrals code Eirene, is used to fit double Langmuir probe measurements and fast camera data in front of a stainless-steel target. The absorbed helicon and ECH power (11 kW) and spatially constant anomalous transport coefficients that are deduced from fitting of the probe and optical data are additionally used for predictive simulations of complete axial distributions of the densities, temperatures, plasma flow velocities, particle and energy fluxes, and possible effects of alternate fueling and pumping scenarios. The somewhat hollow electron density and temperature radial profiles from the probe data suggest that Trivelpiece-Gould wave absorption is the dominant helicon electron heating source in the discharges analyzed here. There is no external ion heating, but the corresponding calculated ion temperature radial profile is not hollow. Rather it reflects ion heating by the electron-ion equilibration terms in the energy balance equations and ion radial transport resulting from the hollow density profile. With the absorbed power and the transport model deduced from fitting the sheath limited discharge data, calculated conduction limited higher recycling conditions were produced by reducing the pumping and increasing the gas fueling rate, resulting in an approximate doubling of the target ion flux and reduction of the target heat flux.
Development of a proto-typology of opiate overdose onset.
Neale, Joanne; Bradford, Julia; Strang, John
2017-01-01
The time available to act is a crucial factor affecting the probable success of interventions to manage opiate overdose. We analyse opiate users' accounts of non-fatal overdose incidents to (i) construct a proto-typology of non-fatal opiate overdose onset and (ii) assess the implications for overdose management and prevention of fatalities. Re-analysis of a subset of data from a large qualitative study of non-fatal opiate overdose conducted from 1997 to 1999. Data were generated from semi-structured interviews undertaken with opiate users who had experienced a non-fatal overdose in the previous 24 hours. Forty-four participants (30 men; 14 women; aged 16-47 years) provided sufficient information for in-depth analysis. Data relating to 'memory of the moment of overdose', 'time to loss of consciousness' and 'subjective description of the overdose experience' were scrutinised using iterative categorization. Four types of overdose onset were identified: type A 'amnesic' (n = 8), characterized by no memory, rapid loss of consciousness and no description of the overdose experience; type B 'conscious' (n = 17), characterized by some memory, sustained consciousness and a description of the overdose in terms of feeling unwell and symptomatic; type C 'instant' (n = 14), characterized by some memory, immediate loss of consciousness and no description of the overdose experience; and type D 'enjoyable' (n = 5), characterized by some memory, rapid loss of consciousness and a description of the overdose experience as pleasant or positive. The identification of different types of overdose onset highlights the complexity of overdose events, the need for a range of interventions and the challenges faced in managing incidents and preventing fatalities. Opiate overdose victims who retain consciousness for a sustained period and recognize the negative signs and symptoms of overdosing could summon help or self-administer naloxone, thus indicating that opiate overdose training should incorporate self-management strategies. © 2016 Society for the Study of Addiction.
Spectral survey of helium lines in a linear plasma device for use in HELIOS imaging
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ray, H. B., E-mail: rayhb@ornl.gov; Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831; Biewer, T. M.
2016-11-15
Fast visible cameras and a filterscope are used to examine the visible light emission from Oak Ridge National Laboratory’s Proto-MPEX. The filterscope has been configured to perform helium line ratio measurements using emission lines at 667.9, 728.1, and 706.5 nm. The measured lines should be mathematically inverted and the ratios compared to a collisional radiative model (CRM) to determine T{sub e} and n{sub e}. Increasing the number of measurement chords through the plasma improves the inversion calculation and subsequent T{sub e} and n{sub e} localization. For the filterscope, one spatial chord measurement requires three photomultiplier tubes (PMTs) connected to pelliclemore » beam splitters. Multiple, fast visible cameras with narrowband filters are an alternate technique for performing these measurements with superior spatial resolution. Each camera contains millions of pixels; each pixel is analogous to one filterscope PMT. The data can then be inverted and the ratios compared to the CRM to determine 2-dimensional “images” of T{sub e} and n{sub e} in the plasma. An assessment is made in this paper of the candidate He I emission lines for an imaging technique.« less
NASA Astrophysics Data System (ADS)
Tani, K.; Ishizuka, O.; Horie, K.; Barth, A. P.; Harigane, Y.; Ueda, H.
2016-12-01
The Izu-Bonin-Mariana Arc is widely regarded to be a typical intra-oceanic arc, with the oceanic Pacific Plate subducting beneath the Philippine Sea Plate, an evolving complex of active and inactive arcs and back-arc basins. However, little is known about the origin of the proto-Philippine Sea Plate, which existed along with the Pacific Plate at the time of subduction initiation in the Eocene. To investigate the crustal structures of the proto-Philippine Sea Plate, we conducted manned-submersible and dredge surveys in the Daito Ridges and the Kyushu-Palau Ridge. The Daito Ridges comprise the northwestern Philippine Sea Plate along with what are regarded as remnants of the proto-Philippine Sea Plate. Submersible observations and rock sampling revealed that the Daito Ridges expose deep crustal sections of gabbroic, granitic, metamorphic, and ultra-mafic rocks, along with volcanic rocks ranging from basalt to andesite. Mesozoic magmatic zircon U-Pb ages have been obtained from the plutonic rocks, and whole-rock geochemistry of the igneous rocks indicates arc origins. Furthermore, mafic schist collected from the Daito Ridge has experienced amphibolite facies metamorphism, with phase assemblages suggesting that the crust was thicker than 20 km at the time. Similar amphibolite-facies metamorphic rocks with Proterozoic zircons have been recovered in the southern Kyushu-Palau Ridge, indicating that such distinctively older basement rocks exist as isolated tectonic blocks within the present Philippine Sea Plate. These finds show that the parts of the Daito Ridges and Kyushu-Palau Ridge represent developed crustal sections of the Pre-Cenozoic arc that comprises part of the proto-Philippine Sea Plate, and, together with the tectonic reconstruction of the proto-Philippine Sea Plate (Deschamps and Lallemand 2002, JGR), they suggest that subduction of the Izu-Bonin-Mariana Arc initiated at the continental margin of the Southeast Asia.
Highly-seasonal monsoons controlled by Central Asian Eocene epicontinental sea
NASA Astrophysics Data System (ADS)
Bougeois, Laurie; Tindall, Julia; de Rafélis, Marc; Reichart, Gert-Jan; de Nooijer, Lennart; Dupont-Nivet, Guillaume
2015-04-01
Modern Asian climate is mainly controlled by seasonal reverse winds driven by continent-ocean thermal contrast. This yields monsoon pattern characterized by a strong seasonality in terms of precipitation and temperature and a duality between humidity along southern and eastern Asia and aridity in Central Asia. According to climate models, Asian Monsoons and aridification have been governed by Tibetan plateau uplift, global climate changes and the retreat of a vast epicontinental sea (the Proto-Paratethys sea) that used to cover Eurasia in Eocene times (55 to 34 Myr ago). Evidence for Asian aridification and monsoons a old as Eocene, are emerging from proxy and model data, however, the role of the Proto-Paratethys sea remains to be established by proxy data. By applying a novel infra-annual geochemical multi-proxy methodology on Eocene oyster shells of the Proto-Paratethys sea and comparing results to climate simulations, we show that the Central Asian region was generally arid with high seasonality from hot and arid summers to wetter winters. This high seasonality in Central Asia supports a monsoonal circulation was already established although the climate pattern was significantly different than today. During winter months, a strong influence of the Proto-Paratethys moisture is indicated by enhanced precipitations significantly higher than today. Precipitation probably dwindled because of the subsequent sea retreat as well as the uplift of the Tibetan and Pamir mountains shielding the westerlies. During Eocene summers, the local climate was hotter and more arid than today despite the presence of the Proto Paratethys. This may be explained by warmer Eocene global conditions with a strong anticyclonic Hadley cell descending at Central Asian latitudes (25 to 45 N). urthermore, the Tibetan plateau emerging at this time to the south must have already contributed a stronger Foehn effect during summer months bringing warm and dry air into Central Asia. Proto-Paratethys moisture driven into Asia by the westerlies during winters provides a potential mechanical link between Eocene global climate and Asian aridification through sea level fluctuations.
Foam model of planetary formation
NASA Astrophysics Data System (ADS)
Andreev, Y.; Potashko, O.
The Analysis of 2637 terrestrial minerals shows presence of characteristic element and isotope structure for each ore irrespective of its site. The model of processes geo-nuclear syntheses elements is offered due to avalanche merge of nucleus which simply explains these laws. Main assumption: nucleus, atoms, connections, ores and minerals were formed in volume of the modern Earth at an early stage of its evolution from uniform proto-substance. Substantive provisions of the model: 1)The most part of nucleus of atoms of all chemical elements of the Earth's crust were formed on the mechanism of avalanche chain merge practically in one stage (in geological scales) in a course of correlated(in scales of a planet) process with allocation of a plenty of heat. 2) Atoms of chemical elements were generated during cooling a planet with preservation of a relative spatial arrangement of nucleus. 3) Chemical compounds have arisen at cooling a surface of a planet and were accompanied by reorganizations (hashing) macro- and geo-scale. 4) Mineral formations are consequence of correlated behaviour of chemical compounds on microscopic scales during phase transition from gaseous or liquid to a firm condition. 5) Synthesis of chemical elements in deep layers of the Earth occurs till now. "Foaming'' instead of "Big Bang" The physical space is continual gas-fluid environment consist of super fluid foam. The continuity, keeping and uniqueness of proto-substance are postulated. Scenario: primary singularity-> droplets(proto-galaxies) droplets(proto-stars)-> droplets(proto-planets)-> droplets(proto- satellites)-> droplets. Proto-planet substance->proton+electron as 1st generation disintegration result of primary foam. Nuclei or nucleonic crystals are the 2nd generation in result of cascade merge of protons into conglomerates. The theory has applied to the analysis of samples of native copper deposit from Rafalovka's ore deposit in Ukraine. The abundance of elements by use of the roentgen fluorescent microanalysis has been made. Changes of a parity of elements are described by nuclear synthesis reactions: 16O+47Ti, 23Na+40Ca, 24Mg+39K, 31P+32S-> 63Cu; 16O+49Ti, 23Na+42Ca, 26Mg+39K, 31P+34S-> 65Cu Dramatical change of isotope parities of 56Fe and 57Fe in the sites of space carried on 3 millimetres. The content of 57Fe is greater then 56Fe in Cu granule.
The evolutionary history of vertebrate cranial placodes II. Evolution of ectodermal patterning.
Schlosser, Gerhard; Patthey, Cedric; Shimeld, Sebastian M
2014-05-01
Cranial placodes are evolutionary innovations of vertebrates. However, they most likely evolved by redeployment, rewiring and diversification of preexisting cell types and patterning mechanisms. In the second part of this review we compare vertebrates with other animal groups to elucidate the evolutionary history of ectodermal patterning. We show that several transcription factors have ancient bilaterian roles in dorsoventral and anteroposterior regionalisation of the ectoderm. Evidence from amphioxus suggests that ancestral chordates then concentrated neurosecretory cells in the anteriormost non-neural ectoderm. This anterior proto-placodal domain subsequently gave rise to the oral siphon primordia in tunicates (with neurosecretory cells being lost) and anterior (adenohypophyseal, olfactory, and lens) placodes of vertebrates. Likewise, tunicate atrial siphon primordia and posterior (otic, lateral line, and epibranchial) placodes of vertebrates probably evolved from a posterior proto-placodal region in the tunicate-vertebrate ancestor. Since both siphon primordia in tunicates give rise to sparse populations of sensory cells, both proto-placodal domains probably also gave rise to some sensory receptors in the tunicate-vertebrate ancestor. However, proper cranial placodes, which give rise to high density arrays of specialised sensory receptors and neurons, evolved from these domains only in the vertebrate lineage. We propose that this may have involved rewiring of the regulatory network upstream and downstream of Six1/2 and Six4/5 transcription factors and their Eya family cofactors. These proteins, which play ancient roles in neuronal differentiation were first recruited to the dorsal non-neural ectoderm in the tunicate-vertebrate ancestor but subsequently probably acquired new target genes in the vertebrate lineage, allowing them to adopt new functions in regulating proliferation and patterning of neuronal progenitors. Copyright © 2014 Elsevier Inc. All rights reserved.
NASA Astrophysics Data System (ADS)
Basile-Doelsch, Isabelle; Amundson, Ronald; Balesdent, Jérome; Borschneck, Daniel; Bottero, Jean-Yves; Colin, Fabrice; de Junet, Alexis; Doelsch, Emmanuel; Legros, Samuel; Levard, Clément; Masion, Armand; Meunier, Jean-Dominique; Rose, Jérôme
2014-05-01
From a strictly mineralogical point of view, weathering of volcanic glass produces secondary phases that are short range ordered alumino-silicates (SRO-AlSi). These are imogolite tubes (2 to 3 nm of diameter) and allophane supposedly spheres (3.5 to 5 nm). Their local structure is composed of a curved gibbsite Al layer and Si tetrahedra in the vacancies (Q0). Proto-imogolites have the same local structure but are roof-shape nanoparticles likely representing the precursors of imogolite and allophanes (Levard et al. 2010). These structures and sizes give to the SRO-AlSi large specific surfaces and high reactivities. In some natural sites, imogolites and allophanes are formed in large quantities. Aging of these phases may lead to the formation of more stable minerals (halloysite, kaolinite and gibbsite) (Torn et al 1997). In natural environments, when the weathering of volcanic glass is associated with the establishment of vegetation, the soils formed are generally andosols. These soils are particularly rich in organic matter (OM), which is explained by the high ability of SRO-AlSi mineral phases to form bonds with organic compounds. In a first order "bulk" approach, it is considered that these bonds strongly stabilize the organic compounds as their mean age can reach more than 10 kyrs in some studied sites (Basile-Doelsch et al. 2005; Torn et al. 1997). However, the structure of the mineral phases present in andosols deserves more attention. Traditionally, the presence in the SRO-AlSi andosols was shown by selective dissolution approaches by oxalate and pyrophosphate. Using spectroscopic methods, mineralogical analysis of SRO-AlSi in andosols samples showed that these mineral phases were neither imogolites nor allophanes as originally supposed, but only less organized structures remained in a state of proto-imogolites (Basile-Doelsch al. 2005 ; Levard et al., 2012). The presence of OM would have an inhibitory effect on the formation of secondary mineral phases, by blocking the crystal growth of SRO-AlSi. Conversely, the effect of minerals on the dynamics of organic compounds also deserves to be studied in greater detail. If the "bulk" approaches showed that proto-imogolites involve long-term stabilized OM, other approaches such as densimetric fractionation and C3/C4 chronosequences (Basile-Doelsch et al. 2007; De Junet et al. 2013) led us to consider a new model involving two types of organo-mineral interactions: (1) OM stabilized by strong bonds to proto-imogolite, leading to a slow OM turnover and (2) OM retained within the porosity of the 3D structure formed by the proto-imogolite (similar to a gel structure), leading to a faster OM turnover. Understanding the mechanisms of organo-mineral interactions in andosols will open new research directions for understanding the mechanisms of stabilization of OM in any type of soil (Bonnard et al. 2012). Basile-Doelsch et al., Geoderma, 137, 477-489, 2007. Basile-Doelsch et al., European Journal of Soil Science, 56, 689-703, 2005. Bonnard et al., European Journal of Soil Science, 63, 5, 625-636, 2012. de Junet, et al., Journal of Analytical and Applied Pyrolysis, 99, 92-10, 2013, Levard et al, Geoderma, 183-184, 100-108, 2012. Levard et al. Chemistry Of Materials, 22, 2466-2473, 2010 Torn et al. Nature, London, 389, 170-173, 1997.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Shaw, G., E-mail: shawgc@ornl.gov; University of Tennessee, Knoxville, Tennessee 37996; Martin, M. Z.
2014-11-15
Laser-induced breakdown spectroscopy (LIBS) is a technique for measuring surface matter composition. LIBS is performed by focusing laser radiation onto a target surface, ablating the surface, forming a plasma, and analyzing the light produced. LIBS surface analysis is a possible diagnostic for characterizing plasma-facing materials in ITER. Oak Ridge National Laboratory has enabled the initial installation of a laser-induced breakdown spectroscopy diagnostic on the prototype Material-Plasma Exposure eXperiment (Proto-MPEX), which strives to mimic the conditions found at the surface of the ITER divertor. This paper will discuss the LIBS implementation on Proto-MPEX, preliminary design of the fiber optic LIBS collectionmore » probe, and the expected results.« less
Expected Science Performance of the Square Kilometre Array Phase 1 (SKA1)
NASA Astrophysics Data System (ADS)
Bourke, Tyler; Braun, Robert; Bonaldi, Anna; Garcia-Miro, Cristina; Keane, Evan; Wagg, Jeff; SKAO Science Team
2018-01-01
The Square Kilometre Array (SKA) will be the world’s largest radio telescope when Phase 1 (SKA1) is completed in the next decade. The past few years have seen great progress toward this goal, through extensive design activities, with construction to start before the end of this decade, and early operations anticipated to begin around 2026. This poster describes the SKA and presents the expected performance and capabilities of SKA1 based on the modelling and proto-typing to date.
The development of spheroidal bodies theory for proto-planetary dynamics problem solving
NASA Astrophysics Data System (ADS)
Krot, A. M.
2007-08-01
There is not a full statistical equilibrium in a gas-dust proto-planetary cloud because of long relaxation time for proto-planet formation in own gravitational field. This protoplanetary system behavior can be described by Jeans equation in partial derivations relatively a distribution function. The problem for finding a general solution of Jeans equation is connected directly with an analytical expression for potential of gravitational field. Thus, the determination of gravitational potential is the main problem of statistical dynamics for proto-planetary system. The work shows this task of protoplanetary dynamics can be solved on the basis of spheroidal bodies theory [1]-[4]. Within the framework of this theory, cosmological bodies have fuzzy outlines and are represented by means of spheroidal forms. The proposed theory follows from the conception for forming a spheroidal body as a proto-planet from dust-like nebula; it permits to derive the form of distribution functions for an immovable spheroidal body [1],[2] and rotating one [3],[4] as well as their density masses (gravitational potentials and strengths) and also to find the distribution function of specific angular momentum for the rotating spheroidal body [4]. References: [1] A.M.Krot, Achievement in Modern Radioelectronics, 1996, no.8, pp.66-81 (in Russian). [2] A.M.Krot, Proc. SPIE's 13thAnnual Intern.Symp. "AeroSense", Orlando, Florida, USA, 1999, vol.3710, pp.1248-1259. [3] A.M.Krot, Proc. 35th COSPAR Scientific Assembly, Paris, France, 2004, Abstract A-00162. [4] A.Krot, Proc. EGU General Assembly, Vienna, Austria, 2006, Geophys. Res. Abstracts, vol.8, A-00216; SRef-ID: 1607-7962/gra/.
Assessment of the Activation of Rho Family GTP-Binding Proteins in Breast Cancer Cells and Specimens
2001-08-01
lymphopenia Vav2 GEF for Rho, Rac, and Cdc42 proto-oncogene product; NM009500 Vav3 GEF for Rho and Rac proto-oncogene product; NM020505 hPEM -2 GEF for...junctions, and desmosomes play a fundamental role in maintaining the polarized phenotype and vectorial transport functions of epithelial cells. The tight
Light and Velocity Variability in Seven Bright Proto-Planetary Nebulae
NASA Astrophysics Data System (ADS)
McGuire, Ryan
2009-01-01
Light and Velocity Variability in Seven Bright Proto-Planetary Nebulae R.B. McGuire, C.M. Steele, B.J. Hrivnak, W. Lu, D. Bohlender, C.D. Scarfe We present new contemporaneous light and velocity observations of seven proto-planetary nebulae obtained over the past two years. Proto-planetary nebulae are objects evolving between the AGB and planetary nebula phases. In these seven objects, the central star is bright (V= 7-10), surrounded by a faint nebula. We knew from past monitoring that the light from each of these varied by a few tenths of a magnitude over intervals of 30-150 days and that the velocity varied by 10 km/s. These appear to be due to pulsation. With these new contemporaneous observations, we are able to measure the correlation between the brightness, color, and velocity, which will constrain the pulsation models. This is an ongoing project with the light monitoring being carried out with the Valparaiso University 0.4 m telescope and CCD camera and the radial velocity observations being carried out with the Dominion Astrophysical Observatory 1.8 m telescope and spectrograph. This research is partially supported by NSF grant 0407087 and the Indiana Space Grant Consortium.
Oceanic Remnants In The Caribbean Plate: Origin And Loss Of Related LIPs.
NASA Astrophysics Data System (ADS)
Giunta, G.
2005-12-01
The modern Caribbean Plate is an independent lithospheric entity, occupying more than 4 Mkm2 and consisting of the remnants of little deformed Cretaceous oceanic plateau of the Colombia and Venezuela Basins (almost 1 Mkm2) and the Palaeozoic-Mesozoic Chortis continental block (about 700,000 km2), both bounded by deformed marginal belts. The northern (Guatemala and Greater Antilles) and the southern (northern Venezuela) plate margins are marked by collisional zones, whereas the western (Central America Isthmus) and the eastern (Lesser Antilles) margins are represented by convergent boundaries and their magmatic arcs, all involving ophiolitic terranes. The evolutionary history of the Caribbean Plate since the Jurassic-Early Cretaceous encompasses plume, accretionary, and collisional tectonics, the evidence of which has been recorded in the oceanic remnants of lost LIPs, as revealed in: i) the MORB to OIB thickened crust of the oceanic plateau, including its un-deformed or little deformed main portion, and scattered deformed tectonic units; ii) ophiolitic tectonic units of MORB affinity and the rock blocks in ophiolitic melanges; iii) intra-oceanic, supra subduction magmatic sequences with IAT and CA affinities. The Mesozoic oceanic LIPs, from which the remnants of the Caribbean Plate have been derived, have been poorly preserved during various episodes of the intra-oceanic convergence, either those related to the original proto-Caribbean oceanic realm or those connected with two eo-Caribbean stages of subduction. The trapped oceanic plateau of the Colombia and Venezuela Basins is likely to be an unknown portion of a bigger crustal element of a LIP, similar to the Ontong-Java plateau. The Jurassic-Early Cretaceous proto-Caribbean oceanic domain consists of oceanic crust generated at multiple spreading centres; during the Cretaceous, part of this crust was thickened to form an oceanic plateau with MORB and OIB affinities. At the same time, both South and North American continental margins, inferred to be close to the oceanic realm, were affected by rifting and within-plate tholeiitic magmatism (WPT); this interpretation supports a near mid-America original location of the "proto-Caribbean" LIP. The MORB magmatic sections and rock blocks in the ophiolitic melanges are interpreted as exhumed tectonic sheets of the normal proto-Caribbean oceanic lithosphere, or part of a back-arc crust, both deformed in the eo-Caribbean stages. The SSZ complexes, considered as Cordilleran-type deformed ophiolites, were derived from a LIP that experienced two superimposed eo-Caribbean stages of intra-oceanic subduction. The older (Mid-Cretaceous) stage involved the eastward subduction of the un-thickened proto-Caribbean lithosphere, resulting in IAT and CA magmatism accompanied by HP-LT metamorphism and melange formation. The second, Late Cretaceous stage involved a westward dipping intra-oceanic subduction, which generated tonalitic arc magmatism. The eastward wedging of the Caribbean Plateau between the North and South American plates progressively trapped remnants of the Colombia and Venezuela Basins between the Atlantic and Pacific subduction zones and their new volcanic arcs (Aves-Lesser Antilles and Central American Isthmus). Unlike the proto-Caribbean, it appears that this LIP did not involve the main continental margins, even though the northern and southern Caribbean borders experienced different evolutionary paths. It was largely lost by superimposed accretionary and collisional events producing the marginal belts of the Caribbean Plate; its evolution has been dominated by a strongly oblique tectonic regime, constraining seafloor spreading, subduction, crustal exhumation, emplacement, and dismembering processes.
A hierarchical, retinotopic proto-organization of the primate visual system at birth
Arcaro, Michael J; Livingstone, Margaret S
2017-01-01
The adult primate visual system comprises a series of hierarchically organized areas. Each cortical area contains a topographic map of visual space, with different areas extracting different kinds of information from the retinal input. Here we asked to what extent the newborn visual system resembles the adult organization. We find that hierarchical, topographic organization is present at birth and therefore constitutes a proto-organization for the entire primate visual system. Even within inferior temporal cortex, this proto-organization was already present, prior to the emergence of category selectivity (e.g., faces or scenes). We propose that this topographic organization provides the scaffolding for the subsequent development of visual cortex that commences at the onset of visual experience DOI: http://dx.doi.org/10.7554/eLife.26196.001 PMID:28671063
Proto-Clusters with Evolved Populations around Radio Galaxies at 2
NASA Astrophysics Data System (ADS)
Kodama, T.; Tanaka, M.; Tanaka, I.; Kajisawa, M.
2007-12-01
We present an on-going near-infrared survey of proto-clusters around high-z radio-loud galaxies at 2 ≲ z ≲ 3 with a new wide-field instrument MOIRCS on Subaru. Most of these field are known to show a large number of Lyα and/or Hα emitters at the same redshifts of the radio galaxies. We see a clear excess of near-infrared selected galaxies (JHK_s-selected galaxies as well as DRG) in these fields, and they are indeed proto-clusters with not only young emitters but also evolved populations. Spatial distribution of such NIR selected galaxies is filamentary and track similar structures traced by the emitters. There is an hint that the bright-end of the red sequence first appeared between z=3 and 2.
Rapid mixing and short storage timescale in the magma dynamics of a steady-state volcano
NASA Astrophysics Data System (ADS)
Petrone, Chiara Maria; Braschi, Eleonora; Francalanci, Lorella; Casalini, Martina; Tommasini, Simone
2018-06-01
Steady-state volcanic activity implies equilibrium between the rate of magma replenishment and eruption of compositionally homogeneous magmas, lasting for tens to thousands of years in an open conduit system. The Present-day activity of Stromboli volcano (Aeolian Islands, Southern Italy) has long been recognised as typical of a steady-state volcano, with a shallow magmatic reservoir (highly porphyritic or hp-magma) continuously refilled by more mafic magma (with low phenocryst content or lp-magma) at a constant rate and accompanied by mixing, crystallisation and eruption. Our aim is to clarify the timescale and dynamics of the plumbing system at the establishment of the Present-day steady-state activity (<1.2 ka) to pinpoint the onset of the steady-state regime. We investigated the Post-Pizzo (PP) pyroclastic sequence (∼1.7-1.5 ka) and one of the Early Paroxysms (EP) of the Present-day activity, focusing on the clinopyroxene population. Whole rock and clinopyroxene compositional variation among the PP and EP magmas is consistent with the time progression of the Stromboli system towards more mafic and lower 87Sr/86Sr compositions, pointing to the chemical and isotopic signature of the Present-day activity. Clinopyroxenes from both PP and EP record a complex history with compositional zoning that reflects growth in three different melt domains: a high-Mg# proto-lp recharging magma, a low-Mg# proto-hp resident magma, and a transient intermediate-Mg# magma. These are the result of complex turbulent flow fields and mixing regimes produced by repeated injections of the proto-lp magma in the shallow proto-hp magma reservoir. During the PP period the magmatic system was already able to regain the pre-input proto-hp composition, gradually changing toward a less evolved signature after the injection(s) of the more mafic proto-lp magma, owing to efficient (days to a few years) stirring and melt homogenisation (i.e., homogenisation time < residence time). Based upon Fe-Mg diffusion in clinopyroxene the total residence time during PP and EP periods, from the arrival of the mafic magma in the shallow system until the eruption, ranges from 1 to ∼50 years. Longer residence times (up to 150 years) have been recorded in the initial phase of the PP sequence, possibly testifying to the transition from a closed- to the open-conduit, steady-state regime of the Present-day activity. Some clinopyroxenes from the PP recorded the mafic triggering event of the feeding proto-lp magma occurring within few months to a few days before eruption. Remarkably, other clinopyroxene portions crystallised and captured the rapid timescales (a few days) of the on-going mixing and homogenisation process between the proto-lp and the proto-hp magmas leading to the eruption. The modelling of clinopyroxene zoning events at Stromboli provides evidence for growth and storage in three different melt domains, and sets robust constraints on their residence time from lp-magma recharge(s) to eruption, along with the timescales of melt homogenisation and triggering events. The lifetime history captured by Fe-Mg zoning of Stromboli clinopyroxenes suggests that the interplay between rapid mixing and short storage timescales can be a key parameter controlling the dynamics of the plumbing system of steady-state volcanoes.
NASA Astrophysics Data System (ADS)
Mezzacappa, A.; Calder, A. C.; Bruenn, S. W.; Blondin, J. M.; Guidry, M. W.; Strayer, M. R.; Umar, A. S.
1998-01-01
We couple two-dimensional hydrodynamics to realistic one-dimensional multigroup flux-limited diffusion neutrino transport to investigate proto-neutron star convection in core-collapse supernovae, and more specifically, the interplay between its development and neutrino transport. Our initial conditions, time-dependent boundary conditions, and neutrino distributions for computing neutrino heating, cooling, and deleptonization rates are obtained from one-dimensional simulations that implement multigroup flux-limited diffusion and one-dimensional hydrodynamics. The development and evolution of proto-neutron star convection are investigated for both 15 and 25 M⊙ models, representative of the two classes of stars with compact and extended iron cores, respectively. For both models, in the absence of neutrino transport, the angle-averaged radial and angular convection velocities in the initial Ledoux unstable region below the shock after bounce achieve their peak values in ~20 ms, after which they decrease as the convection in this region dissipates. The dissipation occurs as the gradients are smoothed out by convection. This initial proto-neutron star convection episode seeds additional convectively unstable regions farther out beneath the shock. The additional proto-neutron star convection is driven by successive negative entropy gradients that develop as the shock, in propagating out after core bounce, is successively strengthened and weakened by the oscillating inner core. The convection beneath the shock distorts its sphericity, but on the average the shock radius is not boosted significantly relative to its radius in our corresponding one-dimensional models. In the presence of neutrino transport, proto-neutron star convection velocities are too small relative to bulk inflow velocities to result in any significant convective transport of entropy and leptons. This is evident in our two-dimensional entropy snapshots, which in this case appear spherically symmetric. The peak angle-averaged radial and angular convection velocities are orders of magnitude smaller than they are in the corresponding ``hydrodynamics-only'' models. A simple analytical model supports our numerical results, indicating that the inclusion of neutrino transport reduces the entropy-driven (lepton-driven) convection growth rates and asymptotic velocities by a factor ~3 (50) at the neutrinosphere and a factor ~250 (1000) at ρ = 1012 g cm-3, for both our 15 and 25 M⊙ models. Moreover, when transport is included, the initial postbounce entropy gradient is smoothed out by neutrino diffusion, whereas the initial lepton gradient is maintained by electron capture and neutrino escape near the neutrinosphere. Despite the maintenance of the lepton gradient, proto-neutron star convection does not develop over the 100 ms duration typical of all our simulations, except in the instance where ``low-test'' intial conditions are used, which are generated by core-collapse and bounce simulations that neglect neutrino-electron scattering and ion-ion screening corrections to neutrino-nucleus elastic scattering. Models favoring the development of proto-neutron star convection either by starting with more favorable, albeit artificial (low-test), initial conditions or by including transport corrections that were ignored in our ``fiducial'' models were considered. Our conclusions nonetheless remained the same. Evidence of proto-neutron star convection in our two-dimensional entropy snapshots was minimal, and, as in our fiducial models, the angle-averaged convective velocities when neutrino transport was included remained orders of magnitude smaller than their counterparts in the corresponding hydrodynamics-only models.
NASA Astrophysics Data System (ADS)
Beltrán, M. T.; Sánchez-Monge, Á.; Cesaroni, R.; Kumar, M. S. N.; Galli, D.; Walmsley, C. M.; Etoka, S.; Furuya, R. S.; Moscadelli, L.; Stanke, T.; van der Tak, F. F. S.; Vig, S.; Wang, K.-S.; Zinnecker, H.; Elia, D.; Schisano, E.
2014-11-01
Context. Theoretical scenarios propose that high-mass stars are formed by disk-mediated accretion. Aims: To test the theoretical predictions on the formation of massive stars, we wish to make a thorough study at high-angular resolution of the structure and kinematics of the dust and gas emission toward the high-mass star-forming region G35.03+0.35, which harbors a disk candidate around a B-type (proto)star. Methods: We carried out ALMA Cycle 0 observations at 870 μm of dust of typical high-density, molecular outflow, and cloud tracers with resolutions of < 0''&dotbelow;5. Complementary Subaru COMICS 25 μm observations were carried out to trace the mid-infrared emission toward this star-forming region. Results: The submillimeter continuum emission has revealed a filamentary structure fragmented into six cores, called A-F. The filament could be in quasi-equilibrium taking into account that the mass per unit length of the filament, 200-375 M⊙/pc, is similar to the critical mass of a thermally and turbulently supported infinite cylinder, ~335 M⊙/pc. The cores, which are on average separated by ~0.02 pc, have deconvolved sizes of 1300-3400 AU, temperatures of 35-240 K, H2 densities >107 cm -3, and masses in the range 1-5 M⊙, and they are subcritical. Core A, which is associated with a hypercompact Hii region and could be the driving source of the molecular outflow observed in the region, is the most chemically rich source in G35.03+0.35 with strong emission of typical hot core tracers such as CH3CN. Tracers of high density and excitation show a clear velocity gradient along the major axis of the core, which is consistent with a disk rotating about the axis of the associated outflow. The PV plots along the SE-NW direction of the velocity gradient show clear signatures of Keplerian rotation, although infall could also be present, and they are consistent with the pattern of an edge-on Keplerian disk rotating about a star with a mass in the range 5-13 M⊙. The high tff/trot ratio for core A suggests that the structure rotates fast and that the accreting material has time to settle into a centrifugally supported disk. Conclusions: G35.03+0.35 is one of the most convincing examples of Keplerian disks rotating about high-mass (proto)stars. This supports theoretical scenarios according to which high-mass stars, at least B-type stars, would form through disk-mediated accretion. Appendices are available in electronic form at http://www.aanda.org
NASA Astrophysics Data System (ADS)
Herman, Scott William
The history of late Miocene (Proto-Gulf) deformation on the Sonoran margin of the Gulf of California is key to understanding how Baja California was captured by the Pacific plate and how strain was partitioned during the Proto-Gulf period (12.5-6 Ma). The Sierra el Aguaje and Sierra Tinajas del Carmen are located in southwestern coastal Sonora, Mexico, and represent the eastern rifted margin of the central Gulf of California. The ranges are composed of volcanic units and their corresponding volcaniclastic units which are the result of persistent magmatic activity between 20 and 8.8 Ma, including three packages of basalt and andesite that make excellent paleomagnetic recorders. Based on cross cutting relations and geochronologic data for pre-, syn-, and post-tectonic volcanic units, most of the faulting and tilting in the Sierra El Aguaje is bracketed between 11.9 and 9.0 Ma, thus falling entirely within Proto-Gulf time. A paleomagnetic investigation into possible vertical axis rotations in the Sierra el Aguaje has uncovered evidence of clockwise rotations between ~13º and ~105º with possible translations. These results are consistent with existing field relations, which suggest the presence of large (>45°) vertical axis rotations in this region. This evidence includes: a) abrupt changes in the strike of tilted strata in different parts of the range, including large domains characterized by E-W strikes b) ubiquitous NE-SW striking faults with left lateral-normal oblique slip, that terminate against major NW-trending right lateral faults, and c) obliquity between the general strike of tilted strata and the strike of faults. These rotations occurred after 12 Ma and largely prior to 9 Ma, thus falling into the Proto-Gulf period. Such large-scale rotations lend credence to the theory that the area inboard of Baja California was experiencing transtension during the Proto-Gulf period, rather than the pure extension that would be the result of strain partitioning between Sonora and the Tosco-Abreojos fault offshore Baja California.
Studies of the HER-2/neu proto-oncogene in human breast and ovarian cancer.
Slamon, D J; Godolphin, W; Jones, L A; Holt, J A; Wong, S G; Keith, D E; Levin, W J; Stuart, S G; Udove, J; Ullrich, A
1989-05-12
Carcinoma of the breast and ovary account for one-third of all cancers occurring in women and together are responsible for approximately one-quarter of cancer-related deaths in females. The HER-2/neu proto-oncogene is amplified in 25 to 30 percent of human primary breast cancers and this alteration is associated with disease behavior. In this report, several similarities were found in the biology of HER-2/neu in breast and ovarian cancer, including a similar incidence of amplification, a direct correlation between amplification and over-expression, evidence of tumors in which overexpression occurs without amplification, and the association between gene alteration and clinical outcome. A comprehensive study of the gene and its products (RNA and protein) was simultaneously performed on a large number of both tumor types. This analysis identified several potential shortcomings of the various methods used to evaluate HER-2/neu in these diseases (Southern, Northern, and Western blots, and immunohistochemistry) and provided information regarding considerations that should be addressed when studying a gene or gene product in human tissue. The data presented further support the concept that the HER-2/neu gene may be involved in the pathogenesis of some human cancers.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Speed, R.C.; Russo, R.M.; Foland, K.A.
The hinterland of the Caribbean Mts. orogen in Trinidad and Venezuela contains schist and gneiss whole protoliths are wholly or partly of continental provenance. The hinterland lies between the foreland thrust belt and terranes. The terranes are alien to continental South America (SA) and may have proto-Caribbean or Caribbean plate origins. The hinterland rocks were widely thought to come from sediments and granitoids of Mesozoic protolithic ages and to be of Cretaceous metamorphic age. Such rocks are now know to be of at least two or more types, as follows: (1) low grade, protoliths of pre-Mesozoic basement and shelfal covermore » of uncertain age range, inboard locus, Oligocene to mid-Miocene metamorphic ages younging eastward (Caracas, Paria, and Northern Range belts), and (2) higher grade including high P/T, varies protoliths of uncertain age range, Cretaceous and ( )early Paleogene metamorphic ages (Tacagua, Araya, Margarita). The geometry, protoliths, structures, and metamorphic ages of type 1 parautochthoneity and an origin as a thickened wedge of crust-cored passive margin cover. The wedge grew by accretion between about 35 and 20 Ma during oblique transport toward the foreland. The diachroneity of metamorphism implies, as does the timing of foreland deformation, that the wedge evolved in a right-oblique collision between northern SA and terranes moving wholly or partly with the Caribbean plate since the Eocene. Type 2 rocks probably came with the terranes and are products of convergent zone tectonics, either in the proto-Caribbean plate. The hinterland boundaries are brittle thrusts that are out of sequence and imply progressive contraction from mid-Cenozoic to the present.« less
Hu, Xueyun; Page, Mike T; Sumida, Akihiro; Tanaka, Ayumi; Terry, Matthew J; Tanaka, Ryouichi
2017-03-01
Proteins that contain iron-sulfur (Fe-S) clusters play pivotal roles in various metabolic processes such as photosynthesis and redox metabolism. Among the proteins involved in the biosynthesis of Fe-S clusters in plants, the SUFB subunit of the SUFBCD complex appears to be unique because SUFB has been reported to be involved in chlorophyll metabolism and phytochrome-mediated signaling. To gain insights into the function of the SUFB protein, we analyzed the phenotypes of two SUFB mutants, laf6 and hmc1, and RNA interference (RNAi) lines with reduced SUFB expression. When grown in the light, the laf6 and hmc1 mutants and the SUFB RNAi lines accumulated higher levels of the chlorophyll biosynthesis intermediate Mg-protoporphyrin IX monomethylester (Mg-proto MME), consistent with the impairment of Mg-proto MME cyclase activity. Both SUFC- and SUFD-deficient RNAi lines accumulated the same intermediate, suggesting that inhibition of Fe-S cluster synthesis is the primary cause of this impairment. Dark-grown laf6 seedlings also showed an increase in protoporphyrin IX (Proto IX), Mg-proto, Mg-proto MME and 3,8-divinyl protochlorophyllide a (DV-Pchlide) levels, but this was not observed in hmc1 or the SUFB RNAi lines, nor was it complemented by SUFB overexpression. In addition, the long hypocotyl in far-red light phenotype of the laf6 mutant could not be rescued by SUFB overexpression and segregated from the pale-green SUFB-deficient phenotype, indicating it is not caused by mutation at the SUFB locus. These results demonstrate that biosynthesis of Fe-S clusters is important for chlorophyll biosynthesis, but that the laf6 phenotype is not due to a SUFB mutation. © 2016 The Authors. The Plant Journal published by John Wiley & Sons Ltd and Society for Experimental Biology.
Observational Corollaries of Proto-AGN: Understanding Formation of Supermassive Black Hole Seeds
NASA Astrophysics Data System (ADS)
Shlosman, Isaac
2016-10-01
Formation of supermassive black holes (SMBHs) is still an enigma. Recent detections of high-z quasars which harbor massive SMBHs provide a challenge to models of structure buildup in the universe. Main alternatives for the formation of SMBH seeds are (1) remnants of Population III stars, and (2) a direct baryonic collapse within dark matter (DM) halos of 10^8 Mo -- first halos whose virial temperature exceeds 10^4 K, and which can lead to the formation of proto-AGN -- luminous pre-SMBH objects. Potentially, this can involve both high-z objects as well as low-z dwarf galaxies in voids. We focus on the direct collapse in 10^8 Mo halos which circumvents the pitfalls of Pop III remnants. The collapse can proceed via a radiation pressure-supported quasistar -- with a modified blackbody continuum. Such a configuration requires a very efficient angular momentum transfer. Or, it can form a thick, differentially rotating, self-gravitating disk, which is associated with an X-ray-infrared continuum and Seyfert-level luminosity, anisotropic emission, massive bi-conical outflows, and will be a powerful source of the Ly-alpha emission. We propose to perform radiative transfer in the continuum and hydrogen lines (e.g., Lyman and Balmer), using our models of proto-AGN, and do it on-the-fly -- concurrently with the collapse. We shall test the path to quasistellar and disky proto-AGN, produce first synthetic spectra of proto-AGN, and address the issue of feasibility of their detection by the JWST. Finally, we shall develop the strategy of searching for these objects at high- and low-z, based on the specific features in the spectra and associated variability.
Yoshimoto, K; Tanaka, C; Moritani, M; Shimizu, E; Yamaoka, T; Yamada, S; Sano, T; Itakura, M
1999-02-01
RET is a receptor tyrosine kinase expressed in neuroendocrine cells and tumors. RET is activated by a ligand complex comprising glial cell line-derived neurotrophic factor (GDNF) and GDNF receptor-alpha (GDNFR-alpha). Activating mutations of the RET proto-oncogene were found in multiple endocrine neoplasia (MEN) 2 and in sporadic medullary thyroid carcinoma and pheochromocytoma of neuroendocrine origin. Mutations of the RET proto-oncogene and the glial cell line-derived neurotrophic factor (GDNF) gene were examined in human pituitary tumors. No mutations of the RET proto-oncogene including the cysteine-rich region or codon 768 and 918 in the tyrosine kinase domain were detected in 172 human pituitary adenomas either by polymerase chain reaction (PCR)-single strand conformation polymorphism (SSCP) or by PCR-restriction fragment length polymorphism (RFLP). Further, somatic mutations of the GDNF gene in 33 human pituitary adenomas were not detected by PCR-SSCP. One polymorphism of the GDNF gene at codon 145 of TGC or TGT was observed in a prolactinoma. The RET proto-oncogene message was detected in a normal human pituitary gland or 4 of 4 human pituitary adenomas with reverse transcription (RT)-PCR, and in rodent pituitary tumor cell lines with Western blotting. The expression of GDNF gene was detected in 1 of 4 human somatotroph adenomas, 1 of 2 corticotroph adenomas, and 2 of 6 rodent pituitary tumor cell lines with RT-PCR. Based on these, it is concluded that somatic mutations of the RET proto-oncogene or the GDNF gene do not appear to play a major role in the pituitary tumorigenesis in examined tumors.
What sets the central structure of dark matter haloes?
NASA Astrophysics Data System (ADS)
Ogiya, Go; Hahn, Oliver
2018-02-01
Dark matter (DM) haloes forming near the thermal cut-off scale of the density perturbations are unique, since they are the smallest objects and form through monolithic gravitational collapse, while larger haloes contrastingly have experienced mergers. While standard cold dark matter (CDM) simulations readily produce haloes that follow the universal Navarro-Frenk-White (NFW) density profile with an inner slope, ρ ∝ r-α, with α = 1, recent simulations have found that when the free-streaming cut-off expected for the CDM model is resolved, the resulting haloes follow nearly power-law density profiles of α ∼ 1.5. In this paper, we study the formation of density cusps in haloes using idealized N-body simulations of the collapse of proto-haloes. When the proto-halo profile is initially cored due to particle free-streaming at high redshift, we universally find ∼r-1.5 profiles irrespective of the proto-halo profile slope outside the core and large-scale non-spherical perturbations. Quite in contrast, when the proto-halo has a power-law profile, then we obtain profiles compatible with the NFW shape when the density slope of the proto-halo patch is shallower than a critical value, αini ∼ 0.3, while the final slope can be steeper for αini ≳ 0.3. We further demonstrate that the r-1.5 profiles are sensitive to small-scale noise, which gradually drives them towards an inner slope of -1, where they become resilient to such perturbations. We demonstrate that the r-1.5 solutions are in hydrostatic equilibrium, largely consistent with a simple analytic model, and provide arguments that angular momentum appears to determine the inner slope.
Power Balance Analysis of the Prototype-Material Plasma Exposure eXperiment
NASA Astrophysics Data System (ADS)
Showers, M. A.; Biewer, T. M.; Caneses, J. F.; Caughman, J. B. O.; Lumsdaine, A.; Owen, L.; Rapp, J.; Youchison, D.; Beers, C. J.; Donovan, D. C.; Kafle, N.; Ray, H. B.
2017-10-01
The Prototype-Material Plasma Exposure eXperiment (Proto-MPEX) is a test bed for the plasma source concept for the planned Material Plasma Exposure eXperiment (MPEX), a steady-state linear device studying plasma material interactions for fusion reactors. A power balance of Proto-MPEX attempts to identify machine operating parameters that will improve Proto-MPEX's performance, potentially impacting the MPEX design concept. A power balance has been performed utilizing an extensive diagnostic suite to identify mechanisms and locations of power loss from the main plasma. The diagnostic package includes infrared cameras, double Langmuir probes, fluoroptic probes, Mach probes, a Thomson scattering diagnostic, a McPherson spectrometer and in-vessel thermocouples. Radiation losses are estimated with absolute calibrated spectroscopic signals. This work was supported by the U.S. D.O.E. contract DE-AC05-00OR22725.
Design of the protoDUNE raw data management infrastructure
Fuess, S.; Illingworth, R.; Mengel, M.; ...
2017-10-01
The Deep Underground Neutrino Experiment (DUNE) will employ a set of Liquid Argon Time Projection Chambers (LArTPC) with a total mass of 40 kt as the main components of its Far Detector. In order to validate this technology and characterize the detector performance at full scale, an ambitious experimental program (called “protoDUNE”) has been initiated which includes a test of the large-scale prototypes for the single-phase and dual-phase LArTPC technologies, which will run in a beam at CERN. The total raw data volume that is slated to be collected during the scheduled 3-month beam run is estimated to be inmore » excess of 2.5 PB for each detector. This data volume will require that the protoDUNE experiment carefully design the DAQ, data handling and data quality monitoring systems to be capable of dealing with challenges inherent with peta-scale data management while simultaneously fulfilling the requirements of disseminating the data to a worldwide collaboration and DUNE associated computing sites. Here in this paper, we present our approach to solving these problems by leveraging the design, expertise and components created for the LHC and Intensity Frontier experiments into a unified architecture that is capable of meeting the needs of protoDUNE.« less
Chapter 50 Geology and tectonic development of the Amerasia and Canada Basins, Arctic Ocean
Grantz, Arthur; Hart, Patrick E.; Childers, Vicki A
2011-01-01
Amerasia Basin is the product of two phases of counterclockwise rotational opening about a pole in the lower Mackenzie Valley of NW Canada. Phase 1 opening brought ocean–continent transition crust (serpentinized peridotite?) to near the seafloor of the proto-Amerasia Basin, created detachment on the Eskimo Lakes Fault Zone of the Canadian Arctic margin and thinned the continental crust between the fault zone and the proto-Amerasia Basin to the west, beginning about 195 Ma and ending prior to perhaps about 160 Ma. The symmetry of the proto-Amerasia Basin was disrupted by clockwise rotation of the Chukchi Microcontinent into the basin from an original position along the Eurasia margin about a pole near 72°N, 165 W about 145.5–140 Ma. Phase 2 opening enlarged the proto-Amerasia Basin by intrusion of mid-ocean ridge basalt along its axis between about 131 and 127.5 Ma. Following intrusion of the Phase 2 crust an oceanic volcanic plateau, the Alpha–Mendeleev Ridge LIP (large igneous province), was extruded over the northern Amerasia Basin from about 127 to 89–75 Ma. Emplacement of the LIP halved the area of the Amerasia Basin, and the area lying south of the LIP became the Canada Basin.
Chapter 50: Geology and tectonic development of the Amerasia and Canada Basins, Arctic Ocean
Grantz, A.; Hart, P.E.; Childers, V.A.
2011-01-01
Amerasia Basin is the product of two phases of counterclockwise rotational opening about a pole in the lower Mackenzie Valley of NW Canada. Phase 1 opening brought ocean-continent transition crust (serpentinized peridotite?) to near the seafloor of the proto-Amerasia Basin, created detachment on the Eskimo Lakes Fault Zone of the Canadian Arctic margin and thinned the continental crust between the fault zone and the proto-Amerasia Basin to the west, beginning about 195 Ma and ending prior to perhaps about 160 Ma. The symmetry of the proto-Amerasia Basin was disrupted by clockwise rotation of the Chukchi Microcontinent into the basin from an original position along the Eurasia margin about a pole near 72??N, 165 Wabout 145.5-140 Ma. Phase 2 opening enlarged the proto-Amerasia Basin by intrusion of mid-ocean ridge basalt along its axis between about 131 and 127.5 Ma. Following intrusion of the Phase 2 crust an oceanic volcanic plateau, the Alpha-Mendeleev Ridge LIP (large igneous province), was extruded over the northern Amerasia Basin from about 127 to 89-75 Ma. Emplacement of the LIP halved the area of the Amerasia Basin, and the area lying south of the LIP became the Canada Basin. ?? 2011 The Geological Society of London.
Design of the protoDUNE raw data management infrastructure
DOE Office of Scientific and Technical Information (OSTI.GOV)
Fuess, S.; Illingworth, R.; Mengel, M.
The Deep Underground Neutrino Experiment (DUNE) will employ a set of Liquid Argon Time Projection Chambers (LArTPC) with a total mass of 40 kt as the main components of its Far Detector. In order to validate this technology and characterize the detector performance at full scale, an ambitious experimental program (called “protoDUNE”) has been initiated which includes a test of the large-scale prototypes for the single-phase and dual-phase LArTPC technologies, which will run in a beam at CERN. The total raw data volume that is slated to be collected during the scheduled 3-month beam run is estimated to be inmore » excess of 2.5 PB for each detector. This data volume will require that the protoDUNE experiment carefully design the DAQ, data handling and data quality monitoring systems to be capable of dealing with challenges inherent with peta-scale data management while simultaneously fulfilling the requirements of disseminating the data to a worldwide collaboration and DUNE associated computing sites. Here in this paper, we present our approach to solving these problems by leveraging the design, expertise and components created for the LHC and Intensity Frontier experiments into a unified architecture that is capable of meeting the needs of protoDUNE.« less
Salas-Gismondi, Rodolfo; Flynn, John J.; Baby, Patrice; Tejada-Lara, Julia V.; Wesselingh, Frank P.; Antoine, Pierre-Olivier
2015-01-01
Amazonia contains one of the world's richest biotas, but origins of this diversity remain obscure. Onset of the Amazon River drainage at approximately 10.5 Ma represented a major shift in Neotropical ecosystems, and proto-Amazonian biotas just prior to this pivotal episode are integral to understanding origins of Amazonian biodiversity, yet vertebrate fossil evidence is extraordinarily rare. Two new species-rich bonebeds from late Middle Miocene proto-Amazonian deposits of northeastern Peru document the same hyperdiverse assemblage of seven co-occurring crocodylian species. Besides the large-bodied Purussaurus and Mourasuchus, all other crocodylians are new taxa, including a stem caiman—Gnatusuchus pebasensis—bearing a massive shovel-shaped mandible, procumbent anterior and globular posterior teeth, and a mammal-like diastema. This unusual species is an extreme exemplar of a radiation of small caimans with crushing dentitions recording peculiar feeding strategies correlated with a peak in proto-Amazonian molluscan diversity and abundance. These faunas evolved within dysoxic marshes and swamps of the long-lived Pebas Mega-Wetland System and declined with inception of the transcontinental Amazon drainage, favouring diversification of longirostrine crocodylians and more modern generalist-feeding caimans. The rise and demise of distinctive, highly productive aquatic ecosystems substantially influenced evolution of Amazonian biodiversity hotspots of crocodylians and other organisms throughout the Neogene. PMID:25716785
The physical properties of accelerated Portland cement for endodontic use.
Camilleri, J
2008-02-01
To investigate the physical properties of a novel accelerated Portland cement. The setting time, compressive strength, pH and solubility of white Portland cement (Lafarge Asland; CEM 1, 52.5 N) and accelerated Portland cement (Proto A) produced by excluding gypsum from the manufacturing process (Aalborg White) and a modified version with 4 : 1 addition of bismuth oxide (Proto B) were evaluated. Proto A set in 8 min. The compressive strength of Proto A was comparable with that of Portland cement at all testing periods (P > 0.05). Additions of bismuth oxide extended the setting time and reduced the compressive strength (P < 0.05). Both cements and storage solution were alkaline. All cements tested increased by >12% of their original weight after immersion in water for 1 day with no further absorption after 28 days. Addition of bismuth oxide increased the water uptake of the novel cement (P < 0.05). The setting time of Portland cement can be reduced by excluding the gypsum during the last stage of the manufacturing process without affecting its other properties. Addition of bismuth oxide affected the properties of the novel cement. Further investigation on the effect that bismuth oxide has on the properties of mineral trioxide aggregate is thus warranted.
Zirconium isotope constraints on the composition of Theia and current Moon-forming theories
NASA Astrophysics Data System (ADS)
Akram, W.; Schönbächler, M.
2016-09-01
The giant impact theory is the most widely recognized formation scenario of the Earth's Moon. Giant impact models based on dynamical simulations predict that the Moon acquired a significant amount of impactor (Theia) material, which is challenging to reconcile with geochemical data for O, Si, Cr, Ti and W isotopes in the Earth and Moon. Three new giant impact scenarios have been proposed to account for this discrepancy - hit-and-run impact, impact with a fast-spinning protoEarth and massive impactors - each one reducing the proportion of the impactor in the Moon compared to the original canonical giant impact model. The validity of each theory and their different dynamical varieties are evaluated here using an integrated approach that considers new high-precision Zr isotope measurements of lunar rocks, and quantitative geochemical modelling of the isotopic composition of the impactor Theia. All analysed lunar samples (whole-rock, ilmenite and pyroxene separates) display identical Zr isotope compositions to that of the Earth within the uncertainty of 13 ppm for 96Zr/90Zr (2σ weighted average). This 13 ppm upper limit is used to infer the most extreme isotopic composition that Theia could have possessed, relative to the Earth, for each of the proposed giant impact theories. The calculated Theian composition is compared with the Zr isotope compositions of different solar system materials in order to constrain the source region of the impactor. As a first order approximation, we show that all considered models (including the canonical) are plausible, alleviating the initial requirement for the new giant impact models. Albeit, the canonical and hit-and-run models are the most restrictive, suggesting that the impactor originated from a region close to the Earth. The fast-spinning protoEarth and massive impactor models are more relaxed and increase the allowed impactor distance from the Earth. Similar calculations carried out for O, Cr, Ti and Si isotope data support these conclusions but exclude a CI- and enstatite chondrite-like composition for Theia. Thus, the impactor Theia most likely had a Zr isotope composition close to that of the Earth, and this suggests that a large part of the inner solar system (or accretion region of the Earth, Theia and enstatite chondrites) had a uniform Zr isotope composition.
Amino acid fermentation at the origin of the genetic code.
de Vladar, Harold P
2012-02-10
There is evidence that the genetic code was established prior to the existence of proteins, when metabolism was powered by ribozymes. Also, early proto-organisms had to rely on simple anaerobic bioenergetic processes. In this work I propose that amino acid fermentation powered metabolism in the RNA world, and that this was facilitated by proto-adapters, the precursors of the tRNAs. Amino acids were used as carbon sources rather than as catalytic or structural elements. In modern bacteria, amino acid fermentation is known as the Stickland reaction. This pathway involves two amino acids: the first undergoes oxidative deamination, and the second acts as an electron acceptor through reductive deamination. This redox reaction results in two keto acids that are employed to synthesise ATP via substrate-level phosphorylation. The Stickland reaction is the basic bioenergetic pathway of some bacteria of the genus Clostridium. Two other facts support Stickland fermentation in the RNA world. First, several Stickland amino acid pairs are synthesised in abiotic amino acid synthesis. This suggests that amino acids that could be used as an energy substrate were freely available. Second, anticodons that have complementary sequences often correspond to amino acids that form Stickland pairs. The main hypothesis of this paper is that pairs of complementary proto-adapters were assigned to Stickland amino acids pairs. There are signatures of this hypothesis in the genetic code. Furthermore, it is argued that the proto-adapters formed double strands that brought amino acid pairs into proximity to facilitate their mutual redox reaction, structurally constraining the anticodon pairs that are assigned to these amino acid pairs. Significance tests which randomise the code are performed to study the extent of the variability of the energetic (ATP) yield. Random assignments can lead to a substantial yield of ATP and maintain enough variability, thus selection can act and refine the assignments into a proto-code that optimises the energetic yield. Monte Carlo simulations are performed to evaluate the establishment of these simple proto-codes, based on amino acid substitutions and codon swapping. In all cases, donor amino acids are assigned to anticodons composed of U+G, and have low redundancy (1-2 codons), whereas acceptor amino acids are assigned to the the remaining codons. These bioenergetic and structural constraints allow for a metabolic role for amino acids before their co-option as catalyst cofactors.
A tectonic model for the Tertiary evolution of strike slip faults and rift basins in SE Asia
NASA Astrophysics Data System (ADS)
Morley, C. K.
2002-04-01
Models for the Tertiary evolution of SE Asia fall into two main types: a pure escape tectonics model with no proto-South China Sea, and subduction of proto-South China Sea oceanic crust beneath Borneo. A related problem is which, if any, of the main strike-slip faults (Mae Ping, Three Pagodas and Aliao Shan-Red River (ASRR)) cross Sundaland to the NW Borneo margin to facilitate continental extrusion? Recent results investigating strike-slip faults, rift basins, and metamorphic core complexes are reviewed and a revised tectonic model for SE Asia proposed. Key points of the new model include: (1) The ASRR shear zone was mainly active in the Eocene-Oligocene in order to link with extension in the South China Sea. The ASRR was less active during the Miocene (tens of kilometres of sinistral displacement), with minor amounts of South China Sea spreading centre extension transferred to the ASRR shear zone. (2) At least three important regions of metamorphic core complex development affected Indochina from the Oligocene-Miocene (Mogok gneiss belt; Doi Inthanon and Doi Suthep; around the ASRR shear zone). Hence, Paleogene crustal thickening, buoyancy-driven crustal collapse, and lower crustal flow are important elements of the Tertiary evolution of Indochina. (3) Subduction of a proto-South China Sea oceanic crust during the Eocene-Early Miocene is necessary to explain the geological evolution of NW Borneo and must be built into any model for the region. (4) The Eocene-Oligocene collision of NE India with Burma activated extrusion tectonics along the Three Pagodas, Mae Ping, Ranong and Klong Marui faults and right lateral motion along the Sumatran subduction zone. (5) The only strike-slip fault link to the NW Borneo margin occurred along the trend of the ASRR fault system, which passes along strike into a right lateral transform system including the Baram line.
Proto-Flight Manipulator Arm (P-FMA)
NASA Technical Reports Server (NTRS)
Britton, W. R.
1977-01-01
The technical development of the Proto-Flight Manipulator Arm (P-FMA) which is a seven-degree-of-freedom general-purpose arm capable of being remotely operated in an earth orbital environment is discussed. The P-FMA is a unique manipulator, combining the capabilities of significant dexterity, high tip forces, precise motion control, gear backdriveability, high end effector grip forces and torques, and the quality of flightworthiness. The 2.4-meter (8-foot) arm weighs 52.2 kilograms (115 pounds).
A Multiwavelength Characterization of Proto-brown-dwarf Candidates in Serpens
NASA Astrophysics Data System (ADS)
Riaz, B.; Vorobyov, E.; Harsono, D.; Caselli, P.; Tikare, K.; Gonzalez-Martin, O.
2016-11-01
We present results from a deep submillimeter survey in the Serpens Main and Serpens/G3-G6 clusters, conducted with the Submillimetre Common-User Bolometer Array (SCUBA-2) at the James Clerk Maxwell Telescope. We have combined near- and mid-infrared spectroscopy, Herschel PACS far-infrared photometry, submillimeter continuum, and molecular gas line observations, with the aim of conducting a detailed multiwavelength characterization of “proto-brown-dwarf” (proto-BD) candidates in Serpens. We have performed continuum and line radiative transfer modeling and have considered various classification schemes to understand the structure and the evolutionary stage of the system. We have identified four proto-BD candidates, of which the lowest-luminosity source has an L bol ˜ 0.05 L ⊙. Two of these candidates show characteristics consistent with Stage 0/I systems, while the other two are Stage I-T/Class Flat systems with tenuous envelopes. Our work has also revealed a ˜20% fraction of misidentified Class 0/I/Flat sources that show characteristics consistent with Class II edge-on disk systems. We have set constraints on the mass of the central object using the measured bolometric luminosities and numerical simulations of stellar evolution. Considering the available gas+dust mass reservoir and the current mass of the central source, three of these candidates are likely to evolve into BDs.
Salas-Gismondi, Rodolfo; Flynn, John J; Baby, Patrice; Tejada-Lara, Julia V; Wesselingh, Frank P; Antoine, Pierre-Olivier
2015-04-07
Amazonia contains one of the world's richest biotas, but origins of this diversity remain obscure. Onset of the Amazon River drainage at approximately 10.5 Ma represented a major shift in Neotropical ecosystems, and proto-Amazonian biotas just prior to this pivotal episode are integral to understanding origins of Amazonian biodiversity, yet vertebrate fossil evidence is extraordinarily rare. Two new species-rich bonebeds from late Middle Miocene proto-Amazonian deposits of northeastern Peru document the same hyperdiverse assemblage of seven co-occurring crocodylian species. Besides the large-bodied Purussaurus and Mourasuchus, all other crocodylians are new taxa, including a stem caiman-Gnatusuchus pebasensis-bearing a massive shovel-shaped mandible, procumbent anterior and globular posterior teeth, and a mammal-like diastema. This unusual species is an extreme exemplar of a radiation of small caimans with crushing dentitions recording peculiar feeding strategies correlated with a peak in proto-Amazonian molluscan diversity and abundance. These faunas evolved within dysoxic marshes and swamps of the long-lived Pebas Mega-Wetland System and declined with inception of the transcontinental Amazon drainage, favouring diversification of longirostrine crocodylians and more modern generalist-feeding caimans. The rise and demise of distinctive, highly productive aquatic ecosystems substantially influenced evolution of Amazonian biodiversity hotspots of crocodylians and other organisms throughout the Neogene. © 2015 The Author(s) Published by the Royal Society. All rights reserved.
A MULTIWAVELENGTH CHARACTERIZATION OF PROTO-BROWN-DWARF CANDIDATES IN SERPENS
DOE Office of Scientific and Technical Information (OSTI.GOV)
Riaz, B.; Caselli, P.; Vorobyov, E.
2016-11-10
We present results from a deep submillimeter survey in the Serpens Main and Serpens/G3–G6 clusters, conducted with the Submillimetre Common-User Bolometer Array (SCUBA-2) at the James Clerk Maxwell Telescope. We have combined near- and mid-infrared spectroscopy, Herschel PACS far-infrared photometry, submillimeter continuum, and molecular gas line observations, with the aim of conducting a detailed multiwavelength characterization of “proto-brown-dwarf” (proto-BD) candidates in Serpens. We have performed continuum and line radiative transfer modeling and have considered various classification schemes to understand the structure and the evolutionary stage of the system. We have identified four proto-BD candidates, of which the lowest-luminosity source hasmore » an L {sub bol} ∼ 0.05 L {sub ☉}. Two of these candidates show characteristics consistent with Stage 0/I systems, while the other two are Stage I-T/Class Flat systems with tenuous envelopes. Our work has also revealed a ∼20% fraction of misidentified Class 0/I/Flat sources that show characteristics consistent with Class II edge-on disk systems. We have set constraints on the mass of the central object using the measured bolometric luminosities and numerical simulations of stellar evolution. Considering the available gas+dust mass reservoir and the current mass of the central source, three of these candidates are likely to evolve into BDs.« less
High power plasma heating experiments on the Proto-MPEX facility
NASA Astrophysics Data System (ADS)
Bigelow, T. S.; Beers, C. J.; Biewer, T. M.; Caneses, J. F.; Caughman, J. B. O.; Diem, S. J.; Goulding, R. H.; Green, D. L.; Kafle, N.; Rapp, J.; Showers, M. A.
2017-10-01
Work is underway to maximize the power delivered to the plasma that is available from heating sources installed on the Prototype Materials Plasma Exposure eXperiment (Proto-MPEX) at ORNL. Proto-MPEX is a linear device that has a >100 kW, 13.56 MHz helicon plasma generator available and is intended for material sample exposure to plasmas. Additional plasma heating systems include a 10 kW 18 GHz electron cyclotron heating (ECH) system, a 25 kW 8 MHz ion cyclotron heating ICH system, and a 200 kW 28 GHz electron Bernstein wave (EBW) and ECH system. Most of the heating systems have relatively good power transmission efficiency, however, the 28 GHz EBW system has a lower efficiency owing to stringent requirements on the microwave launch characteristics for EBW coupling combined with the lower output mode purity of the early-model gyrotron in use and its compact mode converter system. A goal for the Proto-MPEX is to have a combined heating power of 200 kW injected into the plasma. Infrared emission diagnostics of the target plate combined with Thomson Scattering, Langmuir probe, and energy analyzer measurements near the target are utilized to characterize the plasmas and coupling efficiency of the heating systems. ORNL is managed by UT-Battelle, LLC, for the U.S. DOE under contract DE-AC-05-00OR22725.
The symbiosis of photometry and radial-velocity measurements
NASA Technical Reports Server (NTRS)
Cochran, William D.
1994-01-01
The FRESIP mission is optimized to detect the inner planets of a planetary system. According to the current paradigm of planet formation, these planets will probably be small Earth-sized objects. Ground-based radial-velocity programs now have the sensitivity to detect Jovian-mass planets in orbit around bright solar-type stars. We expect the more massive planets to form in the outer regions of a proto-stellar nebula. These two types of measurements will very nicely complement each other, as they have highest detection probability for very different types of planets. The combination of FRESIP photometry and ground-based spectra will provide independent confirmation of the existence of planetary systems in orbit around other stars. Such detection of both terrestrial and Jovian planets in orbit around the same star is essential to test our understanding of planet formation.
Jesić, Maja D; Tancić-Gajić, Milina; Jesić, Milos M; Zivaljević, Vladan; Sajić, Silvija; Vujović, Svetlana; Damjanović, Svetozar
2014-01-01
The multiple endocrine neoplasia type 2A (MEN 2A) syndrome, comprising medullary thyroid carcinoma (MTC), pheochromocytoma and primary hyperparathyroidism (PHPT) is most frequently caused by codon 634 activating mutations of the RET (rearranged during transfection) proto-oncogene on chromosome 10. For this codon-mutation carriers, earlier thyroidectomy (before the age of 5 years) would be advantageous in limiting the potential for the development of MTC as well as parathyroid adenomas. This is a case report of 3-year-old boy from the MEN 2A family (the boy's father and grandmother and paternal aunt) in which cysteine substitutes for phenylalanine at codon 634 in exon 11 of the RET proto-oncogene, who underwent thyroidectomy solely on the basis of genetic information. A boy had no thyromegaly, thyroidal irregularities or lymphadenopathy and no abnormality on the neck ultrasound examination. The pathology finding of thyroid gland was negative for MTC. Two years after total thyroidectomy, 5-year-old boy is healthy with permanent thyroxine replacement. His serum calcitonin level is < 2 pg/ml (normal < 13 pg/ml), has normal serum calcium and parathyroid hormone levels and negative urinary catecholamines. Long-term follow-up of this patient is required to determine whether very early thyroidectomy improves the long-term outcome of PHPT. Children with familial antecedents of MEN 2A should be genetically studied for the purpose of determining the risk of MTC and assessing the possibilities of making prophylactic thyroidectomy before the age of 5 years.
Benej, Martin; Bendlova, Bela; Vaclavikova, Eliska; Poturnajova, Martina
2011-10-06
Reliable and effective primary screening of mutation carriers is the key condition for common diagnostic use. The objective of this study is to validate the method high resolution melting (HRM) analysis for routine primary mutation screening and accomplish its optimization, evaluation and validation. Due to their heterozygous nature, germline point mutations of c-RET proto-oncogene, associated to multiple endocrine neoplasia type 2 (MEN2), are suitable for HRM analysis. Early identification of mutation carriers has a major impact on patients' survival due to early onset of medullary thyroid carcinoma (MTC) and resistance to conventional therapy. The authors performed a series of validation assays according to International Conference on Harmonization of Technical Requirements for Registration of Pharmaceuticals for Human Use (ICH) guidelines for validation of analytical procedures, along with appropriate design and optimization experiments. After validated evaluation of HRM, the method was utilized for primary screening of 28 pathogenic c-RET mutations distributed among nine exons of c-RET gene. Validation experiments confirm the repeatability, robustness, accuracy and reproducibility of HRM. All c-RET gene pathogenic variants were detected with no occurrence of false-positive/false-negative results. The data provide basic information about design, establishment and validation of HRM for primary screening of genetic variants in order to distinguish heterozygous point mutation carriers among the wild-type sequence carriers. HRM analysis is a powerful and reliable tool for rapid and cost-effective primary screening, e.g., of c-RET gene germline and/or sporadic mutations and can be used as a first line potential diagnostic tool.
Tasnim, Abd Razak; Allia, Shahril; Edinur, Hisham Atan; Panneerchelvam, Sundararajulu; Zafarina, Zainuddin; Norazmi, Mohd Nor
2016-08-01
The earliest settlers in Peninsular Malaysia are the Orang Asli population, namely Semang, Senoi and Proto Malays. In the present study, we typed the HLA-A, -B and -DRB1 loci of the Kensiu and Semai Orang Asli sub-groups. Sequence-based HLA typing was performed on 59 individuals from two Orang Asli sub-groups. A total of 11, 18 and 14 HLA-A, -B and -DRB1 alleles were identified, respectively. These data are available in the Allele Frequencies Net Database under the population name "Malaysia Kedah Kensiu" and "Malaysia Pahang Semai". Copyright © 2016 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.
Water Solubility in the Proto-Lunar Disk
NASA Astrophysics Data System (ADS)
Hauri, E. H.; Nakajima, M.
2016-12-01
The giant impact model is the scenario most widely accepted for the origin of the Moon, yet no satisfactory version of this model exists to explain the Earth-like H2O content of primitive lunar magmas. Here we investigate the likelihood that H2O from the Earth was transferred to the Moon in the aftermath of the giant impact. Nearly all variants of the giant impact model produce an energetic impact-generated debris disk that eventually coalesces to form the Moon [1]. Here we investigate the behavior of H2O in disks of Bulk Silicate Earth (BSE) composition produced by three impact scenarios; (a) the standard model of a Mars-sized impactor striking the proto-Earth [2]; (b) impact into a fast-spinning Earth [3]; and (c) impact of two sub-earths each being half the mass of the current Earth [4]. All of these models have been shown to be sufficiently energetic that, at maximum entropy and hydrostatic equilibrium following the impact, most of the mass of the proto-lunar disk consists of silicate melt and vapor, with vapor mass fractions ranging from 20-100% and mid-plane temperatures of 3500-6000K [1]. From these models, we calculate the 2D axisymmetric pressure structure of the disk, and calculate the solubility of H2O in liquid droplets that condense from the vapor atmosphere. Assuming a high bulk Earth H2O content of 1000 ppm, at the Roche radius and close to the disk midplane where pressures are highest (1 to 1000 bars), the mass fraction of all H-bearing species in the vapor is calculated to be ≤0.001, and the maximum H2O solubility in silicate melt is predicted to be <50 ppm because most of the water is dissociated at these high temperatures, in agreement with [5]. As the disk cools past the condensation of silicate vapor, the remaining vapor is dominated by Na and similarly volatile elements, with H2O a minor component of the vapor phase from 2500-1000K. The calculated vapor pressures are low at the midplane with strong vertical gradients, and thus calculated H2O solubility ranges widely, from <10 to 100s of ppm. The water content of forming moonlets is thus sensitive to the disk temperature where the moonlets form as the disk cools. [1] Nakajima & Stevenson (2014) Icarus 233:259-267. [2] Canup (2008) Icarus 196:518-538. [3] Cuk & Stewart (2012) Science 338:1047-1052. [4] Canup (2012) Science 338:1052-1055. [5] Pahlevan (2016) EPSL 445:104-113.
Protofit: A program for determining surface protonation constants from titration data
NASA Astrophysics Data System (ADS)
Turner, Benjamin F.; Fein, Jeremy B.
2006-11-01
Determining the surface protonation behavior of natural adsorbents is essential to understand how they interact with their environments. ProtoFit is a tool for analysis of acid-base titration data and optimization of surface protonation models. The program offers a number of useful features including: (1) enables visualization of adsorbent buffering behavior; (2) uses an optimization approach independent of starting titration conditions or initial surface charge; (3) does not require an initial surface charge to be defined or to be treated as an optimizable parameter; (4) includes an error analysis intrinsically as part of the computational methods; and (5) generates simulated titration curves for comparison with observation. ProtoFit will typically be run through ProtoFit-GUI, a graphical user interface providing user-friendly control of model optimization, simulation, and data visualization. ProtoFit calculates an adsorbent proton buffering value as a function of pH from raw titration data (including pH and volume of acid or base added). The data is reduced to a form where the protons required to change the pH of the solution are subtracted out, leaving protons exchanged between solution and surface per unit mass of adsorbent as a function of pH. The buffering intensity function Qads* is calculated as the instantaneous slope of this reduced titration curve. Parameters for a surface complexation model are obtained by minimizing the sum of squares between the modeled (i.e. simulated) buffering intensity curve and the experimental data. The variance in the slope estimate, intrinsically produced as part of the Qads* calculation, can be used to weight the sum of squares calculation between the measured buffering intensity and a simulated curve. Effects of analytical error on data visualization and model optimization are discussed. Examples are provided of using ProtoFit for data visualization, model optimization, and model evaluation.
Speciation and dissolution of hydrogen in the proto-lunar disk
NASA Astrophysics Data System (ADS)
Pahlevan, Kaveh; Karato, Shun-ichiro; Fegley, Bruce
2016-07-01
Despite very high temperatures accompanying lunar origin, indigenous water in the form of OH has been unambiguously observed in Apollo samples in recent years. Such observations have prompted questions about the abundance and distribution of lunar hydrogen. Here, we investigate the related question of the origin of lunar H: is the hydrogen observed a remnant of a much larger initial inventory that was inherited from a ;wet; Earth but partly depleted during the process of origin, or was primordial hydrogen quantitatively lost from the lunar material, with water being delivered to lunar reservoirs via subsequent impacts after the origins sequence? Motivated by recent results pointing to a limited extent of hydrogen escape from the gravity field of the Earth during lunar origin, we apply a newly developed thermodynamic model of liquid-vapor silicates to the proto-lunar disk to interrogate the behavior of H as a trace element in the energetic aftermath of the giant impact. We find that: (1) pre-existing H-bearing molecules are rapidly dissociated at the temperatures considered (3100-4200 K) and vaporized hydrogen predominantly exists as OH(v), H(v) and MgOH(v) for nearly the full range of thermal states encountered in the proto-lunar disk, (2) despite such a diversity in the vapor speciation - which reduces the water fugacity and favors hydrogen exsolution from co-existing liquids - the equilibration of the vapor atmosphere with the disk liquid results in significant dissolution of H into proto-lunar magmas, and (3) equilibrium H isotopic fractionation in this setting is limited to <10 per mil and the ;terrestrial; character of lunar D/H recently inferred should extend to such a precision if liquid-vapor equilibration in the proto-lunar disk is the process that gave rise to lunar hydrogen. Taken together, these results implicate dissolution as the process responsible for establishing lunar H abundances.
Jałoszyński, Paweł; Beutel, Rolf G
2012-11-01
We present the results of a morphological study of the labium and labial (premental) discs in Cephenniini, ant-like stone beetles feeding on oribatid mites. The discs are composed of a cuticular plate connected by a circumferential ring with the hypopharyngeal suspensorium. The discs have likely developed from the premental cuticle and from internal sclerotizations of the labium. The shape of the external plate can be changed from flat to concave and vice versa by contractions and relaxations of the labial muscles. Contractions result in a flat or only slightly concave shape whereas during relaxation the discs become strongly concave and adhere tightly to the captured mite. Once this is achieved, detaining of the prey is energy-free. Based on known hypotheses concerning the evolution of Oribatida and Staphylinidae, we exclude the possibility of a co-evolution of "proto-Cephenniini" with yet unarmored "proto-Oribatida", and suggest three alternative scenarios: i) the predators co-evolved with a particular early lineage of Oribatida that has acquired the hard armor relatively recently; ii) ancestors of Cephenniini gradually shifted from feeding on other types of prey towards fully armored Oribatida; or iii) the labial discs have originally developed for functions not related to feeding. Copyright © 2012 Elsevier Ltd. All rights reserved.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Boyer, W.B.
1979-09-01
This report describes both the hardware and software components of an automatic calibration and signal system (Autocal) for the data acquisition system for the Sandia particle beam fusion research accelerators Hydra, Proto I, and Proto II. The Autocal hardware consists of off-the-shelf commercial equipment. The various hardware components, special modifications and overall system configuration are described. Special software has been developed to support the Autocal hardware. Software operation and maintenance are described.
Light ion beam fusion research at Sandia National Laboratories
DOE Office of Scientific and Technical Information (OSTI.GOV)
Yonas, G.
1983-01-01
Data has been collected on PBFA I using three related diode types: (1) the Ampfion diode, (2) the applied field diode, and (3) the pinch reflex diode. Concurrent with these PBFA I experiments, complementary experiments were carried out on Proto I at Sandia, as well as the Lion accelerator at Cornell University, and the Gamble II accelerator at the Naval Research Laboratory. In addition to these experiments, improved electromagnetic particle-in-cell codes and analytical treatments were brought to bear on improving our understanding of diode phenomena. A brief review of some of the results is given.
Devlieger, P J
1998-03-01
The terminology related to 'physical disability' in proto-Bantu and in contemporary Bantu languages of Zone L are examined for a better understanding of African classification and meaning. The methods used in the examination include 'words and things' and ethnographic fieldwork. In proto-Bantu, nominal classes are used to categorize disability as both human and non-human. Based on the distribution of terminology, a support for differing regional and historical meaning is developed. The most ancient meaning links physical disability to 'becoming heavy' out of which variants developed. In contemporary Bantu languages in Zone L, the widespread use of the term -lema reemphasizes categorization in both human and non-human, and the use of meaning found in proto-Bantu is evident. However, ethnographic work in the same language area indicates that other terms are important to an understanding of classification and meaning related to physical disability in Zone L. These terms relate to sorcery or reincarnation as meanings attached to disability.
Some aspects of the cosmogonic outward migration of Neptune. Co-planar migration
NASA Astrophysics Data System (ADS)
Neslušan, L.; Jakubík, M.
2013-10-01
Considering a simple model of the cosmogonic outward migration of Neptune, we investigate if the assumption of an extremely low orbital inclination of small bodies in a once-existing proto-planetary disk could influence the structure of reservoirs of the objects in the trans-Neptunian region. We found no significant influence. Our models predict only the existence of the mean-motion resonances (MMRs) with Neptune 2:3, 3:5, 1:2, and an anemic scattered disk (MMRs 3:4, 5:7, and 9:11 are also indicated). To explain the classical Edgeworth-Kuiper belt, relatively abundant 4:7 and 2:5 MMRs, and the more numerous scattered disk, we need to assume that, e.g., the outer boundary of the original proto-planetary disk considerably exceeded the distance of the current Neptune's orbit (Neptune probably ended its migration at the distance, where the disk's density started to be sub-critical), or that some Pluto-sized objects resided inside the MMRs and in the distant parts of the original proto-planetary disk.
Telescope performance and image simulations of the balloon-borne coded-mask protoMIRAX experiment
DOE Office of Scientific and Technical Information (OSTI.GOV)
Penacchioni, A. V., E-mail: ana.penacchioni@inpe.br; Braga, J., E-mail: joao.braga@inpe.br; Castro, M. A., E-mail: manuel.castro@inpe.br
2015-12-17
In this work we present the results of imaging simulations performed with the help of the GEANT4 package for the protoMIRAX hard X-ray balloon experiment. The instrumental background was simulated taking into account the various radiation components and their angular dependence, as well as a detailed mass model of the experiment. We modelled the meridian transits of the Crab Nebula and the Galactic Centre (CG) region during balloon flights in Brazil (∼ −23° of latitude and an altitude of ∼40 km) and introduced the correspondent spectra as inputs to the imaging simulations. We present images of the Crab and ofmore » three sources in the GC: 1E 1740.7-2942, GRS 1758-258 and GX 1+4. The results show that the protoMIRAX experiment is capable of making spectral and timing observations of bright hard X-ray sources as well as important imaging demonstrations that will contribute to the design of the MIRAX satellite mission.« less
Weld, R; Heinemann, J; Eady, C
2001-03-01
The transient nature of T-DNA expression was studied with a gfp reporter gene transferred to Nicotiana plumbaginifolia suspension cells from Agrobacterium tumefaciens. Individual GFP-expressing protoplasts were isolated after 4 days' co-cultivation. The protoplasts were cultured without selection and 4 weeks later the surviving proto-calluses were again screened for GFP expression. Of the proto-calluses initially expressing GFP, 50% had lost detectable GFP activity during the first 4 weeks of culture. Multiple T-DNA copies of the gfp gene were detected in 10 of 17 proto-calluses lacking visible GFP activity. The remaining 7 cell lines contained no gfp sequences. Our results confirm that transiently expressed T-DNAs can be lost during growth of somatic cells and demonstrate that transiently expressing cells frequently integrate multiple T-DNAs that become silenced. In cells competent for DNA uptake, cell death and gene silencing were more important barriers to the recovery of stably expressing transformants than lack of T-DNA integration.
The Rice Paradox: Multiple Origins but Single Domestication in Asian Rice
Choi, Jae Young; Platts, Adrian E.; Fuller, Dorian Q.; Hsing (邢禹依), Yue-Ie; Wing, Rod A.
2017-01-01
Abstract The origin of domesticated Asian rice (Oryza sativa) has been a contentious topic, with conflicting evidence for either single or multiple domestication of this key crop species. We examined the evolutionary history of domesticated rice by analyzing de novo assembled genomes from domesticated rice and its wild progenitors. Our results indicate multiple origins, where each domesticated rice subpopulation (japonica, indica, and aus) arose separately from progenitor O. rufipogon and/or O. nivara. Coalescence-based modeling of demographic parameters estimate that the first domesticated rice population to split off from O. rufipogon was O. sativa ssp. japonica, occurring at ∼13.1–24.1 ka, which is an order of magnitude older then the earliest archeological date of domestication. This date is consistent, however, with the expansion of O. rufipogon populations after the Last Glacial Maximum ∼18 ka and archeological evidence for early wild rice management in China. We also show that there is significant gene flow from japonica to both indica (∼17%) and aus (∼15%), which led to the transfer of domestication alleles from early-domesticated japonica to proto-indica and proto-aus populations. Our results provide support for a model in which different rice subspecies had separate origins, but that de novo domestication occurred only once, in O. sativa ssp. japonica, and introgressive hybridization from early japonica to proto-indica and proto-aus led to domesticated indica and aus rice. PMID:28087768
Cushing Disease in a patient with Multiple Endocrine Neoplasia type 2B.
Kasturi, Kannan; Fernandes, Lucas; Quezado, Martha; Eid, Mary; Marcus, Leigh; Chittiboina, Prashant; Rappaport, Mark; Stratakis, Constantine A; Widemann, Brigitte; Lodish, Maya
2017-06-01
Multiple endocrine neoplasia type 2B (MEN2B) is a rare autosomal-dominant cancer syndrome characterized in part by metastatic medullary thyroid cancer (MTC) and pheochromocytoma. Cushing disease is a rare cause of endogenous hypercortisolism in children. We describe a 21-year-old African-American male who was diagnosed at age 10 with an ACTH-secreting pituitary microadenoma. At age 16 he developed medullary thyroid cancer and was found to have multiple endocrine neoplasia type 2B with the characteristic M918T mutation of the RET proto-oncogene. Following thyroidectomy, he was initiated on Vandetanib, a tyrosine kinase inhibitor, and has since had stable disease over the last 5 years. Our patient is the first individual with MEN2B to be described with Cushing disease. The RET oncogene may play a role in pituitary tumorigenesis; alternatively, the coexistence of these two entities may represent an extremely rare coincidence.
Amino acid fermentation at the origin of the genetic code
2012-01-01
There is evidence that the genetic code was established prior to the existence of proteins, when metabolism was powered by ribozymes. Also, early proto-organisms had to rely on simple anaerobic bioenergetic processes. In this work I propose that amino acid fermentation powered metabolism in the RNA world, and that this was facilitated by proto-adapters, the precursors of the tRNAs. Amino acids were used as carbon sources rather than as catalytic or structural elements. In modern bacteria, amino acid fermentation is known as the Stickland reaction. This pathway involves two amino acids: the first undergoes oxidative deamination, and the second acts as an electron acceptor through reductive deamination. This redox reaction results in two keto acids that are employed to synthesise ATP via substrate-level phosphorylation. The Stickland reaction is the basic bioenergetic pathway of some bacteria of the genus Clostridium. Two other facts support Stickland fermentation in the RNA world. First, several Stickland amino acid pairs are synthesised in abiotic amino acid synthesis. This suggests that amino acids that could be used as an energy substrate were freely available. Second, anticodons that have complementary sequences often correspond to amino acids that form Stickland pairs. The main hypothesis of this paper is that pairs of complementary proto-adapters were assigned to Stickland amino acids pairs. There are signatures of this hypothesis in the genetic code. Furthermore, it is argued that the proto-adapters formed double strands that brought amino acid pairs into proximity to facilitate their mutual redox reaction, structurally constraining the anticodon pairs that are assigned to these amino acid pairs. Significance tests which randomise the code are performed to study the extent of the variability of the energetic (ATP) yield. Random assignments can lead to a substantial yield of ATP and maintain enough variability, thus selection can act and refine the assignments into a proto-code that optimises the energetic yield. Monte Carlo simulations are performed to evaluate the establishment of these simple proto-codes, based on amino acid substitutions and codon swapping. In all cases, donor amino acids are assigned to anticodons composed of U+G, and have low redundancy (1-2 codons), whereas acceptor amino acids are assigned to the the remaining codons. These bioenergetic and structural constraints allow for a metabolic role for amino acids before their co-option as catalyst cofactors. Reviewers: this article was reviewed by Prof. William Martin, Prof. Eörs Szathmáry (nominated by Dr. Gáspár Jékely) and Dr. Ádám Kun (nominated by Dr. Sandor Pongor) PMID:22325238
Golijow, C D; Mourón, S A; Gómez, M A; Dulout, F N
1999-12-01
Ninety-one non cancerous samples from genital specimens positives for VPH 16 or 18 and 27 non-infected samples as controls were studied. Mutations at codon 12 in K-ras gene was analyzed using enriched alelic PCR technique. Among the samples studied 17.58% showed mutations in this codon. Significant differences were observed between the control group (negative DNA-HPV) and positives DNA-HPV samples (p < 0.01). No differences were found between both viral types in relation to the mutation frequency. The presence of mutations in the K-ras gene in non cancerous cytological samples point out new questions about the role of mutations in proto-oncogenes and the development of cervical cancer.
Yan, Weixin; Zhang, Aiguo; Powell, Michael J
2016-07-21
Gastrointestinal stromal tumors (GISTs) have been recognized as a biologically distinctive type of tumor, different from smooth muscle and neural tumors of the gastrointestinal tract. The identification of genetic aberrations in proto-oncogenes that drive the growth of GISTs is critical for improving the efficacy of cancer therapy by matching targeted drugs to specific mutations. Research into the oncogenic mechanisms of GISTs has found that these tumors frequently contain activating gene mutations in either platelet-derived growth factor receptor A (PDGFRA) or a receptor tyrosine protein associated with a mast cell growth factor receptor encoded by the KIT gene. Mutant cancer subpopulations have the potential to disrupt durable patient responses to molecularly targeted therapy for GISTs, yet the prevalence and size of subpopulations remain largely unexplored. Detection of the cancer subpopulations that harbor low-frequency mutant alleles of target proto-oncogenes through the use of molecular genetic methods, such as polymerase chain reaction (PCR) target amplification technology, is hampered by the high abundance of wild-type alleles, which limit the sensitivity of detection of these minor mutant alleles. This is especially true in the case of mutant tumor DNA derived "driver" and "drug-resistant" alleles that are present in the circulating cell-free tumor DNA (cfDNA) in the peripheral blood circulation of GIST patients. So-called "liquid biopsy" allows for the dynamic monitoring of the patients' tumor status during treatment using minimally invasive sampling. New methodologies, such as a technology that employs a xenonucleic acid (XNA) clamping probe to block the PCR amplification of wild-type templates, have allowed improved molecular detection of these low-frequency alleles both in tissue biopsy samples and in cfDNA. These new methodologies could be widely applied for minimally invasive molecular testing in the therapeutic management of GISTs.
Nebular chemistry and theories of lunar origin
NASA Technical Reports Server (NTRS)
Larimer, John W.
1986-01-01
The cosmic history of planetary matter is traced from nucleosynthesis through accretion in an attempt to understand the origin of the moon. It is noted that nebular processes must be considered in any theory of lunar origin and that planetary differentiation and volcanism determine the final character of lunar rocks. The moon's unique blend of nebular components suggests that the earth and moon accreted from the same mix of components as the proto-moon orbited the proto-earth, with the earth winning and the moon progressively losing, its solar complement of the components.
A 3D CZT high resolution detector for x- and gamma-ray astronomy
NASA Astrophysics Data System (ADS)
Kuvvetli, I.; Budtz-Jørgensen, C.; Zappettini, A.; Zambelli, N.; Benassi, G.; Kalemci, E.; Caroli, E.; Stephen, J. B.; Auricchio, N.
2014-07-01
At DTU Space we have developed a high resolution three dimensional (3D) position sensitive CZT detector for high energy astronomy. The design of the 3D CZT detector is based on the CZT Drift Strip detector principle. The position determination perpendicular to the anode strips is performed using a novel interpolating technique based on the drift strip signals. The position determination in the detector depth direction, is made using the DOI technique based the detector cathode and anode signals. The position determination along the anode strips is made with the help of 10 cathode strips orthogonal to the anode strips. The position resolutions are at low energies dominated by the electronic noise and improve therefore with increased signal to noise ratio as the energy increases. The achievable position resolution at higher energies will however be dominated by the extended spatial distribution of the photon produced ionization charge. The main sources of noise contribution of the drift signals are the leakage current between the strips and the strip capacitance. For the leakage current, we used a metallization process that reduces the leakage current by means of a high resistive thin layer between the drift strip electrodes and CZT detector material. This method was applied to all the proto type detectors and was a very effective method to reduce the surface leakage current between the strips. The proto type detector was recently investigated at the European Synchrotron Radiation Facility, Grenoble which provided a fine 50 × 50 μm2 collimated X-ray beam covering an energy band up to 600 keV. The Beam positions are resolved very well with a ~ 0.2 mm position resolution (FWHM ) at 400 keV in all directions.
Weiser, Keith C.; Liu, Bin; Hansen, Gwenn M.; Skapura, Darlene; Hentges, Kathryn E.; Yarlagadda, Sujatha; Morse III, Herbert C.
2007-01-01
AKXD recombinant inbred (RI) strains develop a variety of leukemias and lymphomas due to somatically acquired insertions of retroviral DNA into the genome of hematopoetic cells that can mutate cellular proto-oncogenes and tumor suppressor genes. We generated a new set of tumors from nine AKXD RI strains selected for their propensity to develop B-cell tumors, the most common type of human hematopoietic cancers. We employed a PCR technique called viral insertion site amplification (VISA) to rapidly isolate genomic sequence at the site of provirus insertion. Here we describe 550 VISA sequence tags (VSTs) that identify 74 common insertion sites (CISs), of which 21 have not been identified previously. Several suspected proto-oncogenes and tumor suppressor genes lie near CISs, providing supportive evidence for their roles in cancer. Furthermore, numerous previously uncharacterized genes lie near CISs, providing a pool of candidate disease genes for future research. Pathway analysis of candidate genes identified several signaling pathways as common and powerful routes to blood cancer, including Notch, E-protein, NFκB, and Ras signaling. Misregulation of several Notch signaling genes was confirmed by quantitative RT-PCR. Our data suggest that analyses of insertional mutagenesis on a single genetic background are biased toward the identification of cooperating mutations. This tumor collection represents the most comprehensive study of the genetics of B-cell leukemia and lymphoma development in mice. We have deposited the VST sequences, CISs in a genome viewer, histopathology, and molecular tumor typing data in a public web database called VISION (Viral Insertion Sites Identifying Oncogenes), which is located at http://www.mouse-genome.bcm.tmc.edu/vision. PMID:17926094
Weiser, Keith C; Liu, Bin; Hansen, Gwenn M; Skapura, Darlene; Hentges, Kathryn E; Yarlagadda, Sujatha; Morse Iii, Herbert C; Justice, Monica J
2007-10-01
AKXD recombinant inbred (RI) strains develop a variety of leukemias and lymphomas due to somatically acquired insertions of retroviral DNA into the genome of hematopoetic cells that can mutate cellular proto-oncogenes and tumor suppressor genes. We generated a new set of tumors from nine AKXD RI strains selected for their propensity to develop B-cell tumors, the most common type of human hematopoietic cancers. We employed a PCR technique called viral insertion site amplification (VISA) to rapidly isolate genomic sequence at the site of provirus insertion. Here we describe 550 VISA sequence tags (VSTs) that identify 74 common insertion sites (CISs), of which 21 have not been identified previously. Several suspected proto-oncogenes and tumor suppressor genes lie near CISs, providing supportive evidence for their roles in cancer. Furthermore, numerous previously uncharacterized genes lie near CISs, providing a pool of candidate disease genes for future research. Pathway analysis of candidate genes identified several signaling pathways as common and powerful routes to blood cancer, including Notch, E-protein, NFkappaB, and Ras signaling. Misregulation of several Notch signaling genes was confirmed by quantitative RT-PCR. Our data suggest that analyses of insertional mutagenesis on a single genetic background are biased toward the identification of cooperating mutations. This tumor collection represents the most comprehensive study of the genetics of B-cell leukemia and lymphoma development in mice. We have deposited the VST sequences, CISs in a genome viewer, histopathology, and molecular tumor typing data in a public web database called VISION (Viral Insertion Sites Identifying Oncogenes), which is located at http://www.mouse-genome.bcm.tmc.edu/vision .
NASA Astrophysics Data System (ADS)
Wang, Tao; Song, Xiaodong
2018-03-01
Anisotropy of Earth's inner core provides a key role to understand its evolution and the Earth's magnetic field. Recently, using autocorrelations from earthquake's coda, we found an equatorial anisotropy of the inner-inner core (IIC), in apparent contrast to the polar anisotropy of the outer-inner core (OIC). To reduce the influence of the polar anisotropy and reduce possible contaminations from the large Fresnel zone of the PKIKP2 and PKIIKP2 phases at low frequencies, we processed coda noise of large earthquakes (10,000-40,000 s after magnitude ≥7.0) from stations at low latitudes (within ±35°) during 1990-2013. Using a number of improved procedures of both autocorrelation and cross-correlation, we extracted 52 array-stacked high-quality empirical Green's functions (EGFs), an increase of over 60% from our previous study. The high-quality data allow us to measure the relative arrival times by automatic waveform cross correlation. The results show large variation (∼10.9 s) in the differential times between the PKIKP2 and PKIIKP2 phases. The estimated influence of the Fresnel zone is insignificant (<1.1 s), compared to the observed data variation and measurement uncertainty. The observed time residuals match very well previous IIC model with a quasi-equatorial fast axis (near Central America and the Southeast Asia) and the spatial pattern from the low-latitude measurements is similar to the previous global dataset, including the fast axis and two low-velocity open rings, thus providing further support for the equatorial anisotropy model of the IIC. Speculations for the shift of the fast axis between the OIC and the IIC include: change of deformation regimes during the inner core history, change of geomagnetic field, and a proto-inner core.
NASA Astrophysics Data System (ADS)
Deng, Li; Zhao, Yurong; Zhou, Peng; Xu, Hai; Wang, Yanting
2016-12-01
Besides our previous experimental discovery (Zhao Y R, et al. 2015 Langmuir, 31, 12975) that acetonitrile (ACN) can tune the morphological features of nanostructures self-assembled by short peptides KIIIIK (KI4K) in aqueous solution, further experiments reported in this work demonstrate that ACN can also tune the mass of the self-assembled nanostructures. To understand the microscopic mechanism how ACN molecules interfere peptide self-assembly process, we conducted a series of molecular dynamics simulations on a monomer, a cross-β sheet structure, and a proto-fibril of KI4K in pure water, pure ACN, and ACN-water mixtures, respectively. The simulation results indicate that ACN enhances the intra-sheet interaction dominated by the hydrogen bonding (H-bonding) interactions between peptide backbones, but weakens the inter-sheet interaction dominated by the interactions between hydrophobic side chains. Through analyzing the correlations between different groups of solvent and peptides and the solvent behaviors around the proto-fibril, we have found that both the polar and nonpolar groups of ACN play significant roles in causing the opposite effects on intermolecular interactions among peptides. The weaker correlation of the polar group of ACN than water molecule with the peptide backbone enhances H-bonding interactions between peptides in the proto-fibril. The stronger correlation of the nonpolar group of ACN than water molecule with the peptide side chain leads to the accumulation of ACN molecules around the proto-fibril with their hydrophilic groups exposed to water, which in turn allows more water molecules close to the proto-fibril surface and weakens the inter-sheet interactions. The two opposite effects caused by ACN form a microscopic mechanism clearly explaining our experimental observations. Project supported by the National Basic Research Program of China (Grant No. 2013CB932804), the National Natural Science Foundation of China (Grant Nos. 91227115, 11421063, 11504431, and 21503275), the Fundamental Research Funds for Central Universities of China (Grant No. 15CX02025A), and the Application Research Foundation for Post-doctoral Scientists of Qingdao City, China (Grant No. T1404096).
Mondal, Prakash Ranjan; Saksena, Deepti; Sachdeva, Mohinder Pal; Murry, Benrithung; Meitei, Khangembam Somibabu; Samtani, Ratika; Saraswathy, Kallur Nava
2011-06-01
The present study was conducted on two tribal communities, the Oraon and Munda, inhabiting the Ranchi district of Jharkhand state, India. The study was designed to elucidate genetic similarity, if any, shared between these tribes as they belong to the common Proto-Australoid stock but bear different linguistic affiliations. For this, a total of 98 intravenous blood samples (48 Oraon and 50 Munda) were collected from unrelated individuals of either sex up to first cousins, with their prior informed written consent. The DNA was extracted and studied for a total of 20 autosomal markers, including 7 Alu Indels, 3 DRD2 TaqI sites, 3 β-globin sites, and 7 restriction site polymorphisms. All the 20 studied molecular markers were found to be polymorphic in both the tribal population groups and showed similarities with respect to allele frequencies, with a low coefficient of gene differentiation (G(ST)) value. Moreover, sharing and distribution patterns of haplotypes of the β-globin gene cluster suggest that the Oraon and Munda share a common ancestry. However, small differences between them with reference to the linkage disequilibrium (LD) pattern indicate that the Munda might have emerged as a result of admixture between Proto-Australoids and Austro-Asiatic-speaking Mongoloids as supported by the principal co-ordinate analysis, wherein the Munda are closely placed with the Dravidian-speaking Proto-Australoid tribes of India. A common genetic substratum (Proto-Australoid stock) of the Oraon and Munda was evident in the present study, although these tribes are distinct linguistically.
Matsuda, Miho; Nogare, Damian Dalle; Somers, Katherine; Martin, Kathleen; Wang, Chongmin; Chitnis, Ajay B
2013-06-01
The posterior lateral line primordium (PLLp) migrates caudally and periodically deposits neuromasts. Coupled, but mutually inhibitory, Wnt-FGF signaling systems regulate proto-neuromast formation in the PLLp: FGF ligands expressed in response to Wnt signaling activate FGF receptors and initiate proto-neuromast formation. FGF receptor signaling, in turn, inhibits Wnt signaling. However, mechanisms that determine periodic neuromast formation and deposition in the PLLp remain poorly understood. Previous studies showed that neuromasts are deposited closer together and the PLLp terminates prematurely in lef1-deficient zebrafish embryos. It was suggested that this results from reduced proliferation in the leading domain of the PLLp and/or premature incorporation of progenitors into proto-neuromasts. We found that rspo3 knockdown reduces proliferation in a manner similar to that seen in lef1 morphants. However, it does not cause closer neuromast deposition or premature termination of the PLLp, suggesting that such changes in lef1-deficient embryos are not linked to changes in proliferation. Instead, we suggest that they are related to the role of Lef1 in regulating the balance of Wnt and FGF functions in the PLLp. Lef1 determines expression of the FGF signaling inhibitor Dusp6 in leading cells and regulates incorporation of cells into neuromasts; reduction of Dusp6 in leading cells in lef1-deficient embryos allows new proto-neuromasts to form closer to the leading edge. This is associated with progressively slower PLLp migration, reduced spacing between deposited neuromasts and premature termination of the PLLp system.
Matsuda, Miho; Nogare, Damian Dalle; Somers, Katherine; Martin, Kathleen; Wang, Chongmin; Chitnis, Ajay B.
2013-01-01
The posterior lateral line primordium (PLLp) migrates caudally and periodically deposits neuromasts. Coupled, but mutually inhibitory, Wnt-FGF signaling systems regulate proto-neuromast formation in the PLLp: FGF ligands expressed in response to Wnt signaling activate FGF receptors and initiate proto-neuromast formation. FGF receptor signaling, in turn, inhibits Wnt signaling. However, mechanisms that determine periodic neuromast formation and deposition in the PLLp remain poorly understood. Previous studies showed that neuromasts are deposited closer together and the PLLp terminates prematurely in lef1-deficient zebrafish embryos. It was suggested that this results from reduced proliferation in the leading domain of the PLLp and/or premature incorporation of progenitors into proto-neuromasts. We found that rspo3 knockdown reduces proliferation in a manner similar to that seen in lef1 morphants. However, it does not cause closer neuromast deposition or premature termination of the PLLp, suggesting that such changes in lef1-deficient embryos are not linked to changes in proliferation. Instead, we suggest that they are related to the role of Lef1 in regulating the balance of Wnt and FGF functions in the PLLp. Lef1 determines expression of the FGF signaling inhibitor Dusp6 in leading cells and regulates incorporation of cells into neuromasts; reduction of Dusp6 in leading cells in lef1-deficient embryos allows new proto-neuromasts to form closer to the leading edge. This is associated with progressively slower PLLp migration, reduced spacing between deposited neuromasts and premature termination of the PLLp system. PMID:23637337
Toward self-consistent tectono-magmatic numerical model of rift-to-ridge transition
NASA Astrophysics Data System (ADS)
Gerya, Taras; Bercovici, David; Liao, Jie
2017-04-01
Natural data from modern and ancient lithospheric extension systems suggest three-dimensional (3D) character of deformation and complex relationship between magmatism and tectonics during the entire rift-to-ridge transition. Therefore, self-consistent high-resolution 3D magmatic-thermomechanical numerical approaches stand as a minimum complexity requirement for modeling and understanding of this transition. Here we present results from our new high-resolution 3D finite-difference marker-in-cell rift-to-ridge models, which account for magmatic accretion of the crust and use non-linear strain-weakened visco-plastic rheology of rocks that couples brittle/plastic failure and ductile damage caused by grain size reduction. Numerical experiments suggest that nucleation of rifting and ridge-transform patterns are decoupled in both space and time. At intermediate stages, two patterns can coexist and interact, which triggers development of detachment faults, failed rift arms, hyper-extended margins and oblique proto-transforms. En echelon rift patterns typically develop in the brittle upper-middle crust whereas proto-ridge and proto-transform structures nucleate in the lithospheric mantle. These deep proto-structures propagate upward, inter-connect and rotate toward a mature orthogonal ridge-transform patterns on the timescale of millions years during incipient thermal-magmatic accretion of the new oceanic-like lithosphere. Ductile damage of the extending lithospheric mantle caused by grain size reduction assisted by Zenner pinning plays critical role in rift-to-ridge transition by stabilizing detachment faults and transform structures. Numerical results compare well with observations from incipient spreading regions and passive continental margins.
NASA Astrophysics Data System (ADS)
Roos, U.-P.
1984-03-01
Based on the assumption that the ancestral proto-eukaryote evolved from an ameboid prokarybte I propose the hypothesis that nuclear division of the proto-eukaryote was effected by the same system of contractile filaments it used for ameboid movement and cytosis. When the nuclear membranes evolved from the cell membrane, contractile filaments remained associated with them. The attachment site of the genome in the nuclear envelope was linked to the cell membrane by specialized contractile filaments. During protomitosis, i.e., nuclear and cell division of the proto-eukaryote, these filaments performed segregation of the chromosomes, whereas others constricted and cleaved the nucleus and the mother cell. When microtubules (MTs) had evolved in the cytoplasm, they also became engaged in nuclear division. Initially, an extranuolear bundle of MTs assisted chromosome segregation by establishing a defined axis. The evolutionary tendency then was towards an increasingly important role for MTs. Spindle pole bodies (SPBs) developed from the chromosomal attachment sites in the nuclear envelope and organized an extranuclear central spindle. The chromosomes remained attached to the SPBs during nuclear division. In a subsequent step the spindle became permanently lodged inside the nucleus. Chromosomes detached from the SPBs and acquired kinetochores and kinetochore-MTs. At first, this spindle segregated chromosomes by elongation, the kinetochore-MTs playing the role of static anchors. Later, spindle elongation was supplemented by poleward movement of the chromosomes. When dissolution of the nuclear envelope at the beginning of mitosis became a permanent feature, the open spindle of higher eukaryotes was born.
The pre-vertebrate origins of neurogenic placodes.
Abitua, Philip Barron; Gainous, T Blair; Kaczmarczyk, Angela N; Winchell, Christopher J; Hudson, Clare; Kamata, Kaori; Nakagawa, Masashi; Tsuda, Motoyuki; Kusakabe, Takehiro G; Levine, Michael
2015-08-27
The sudden appearance of the neural crest and neurogenic placodes in early branching vertebrates has puzzled biologists for over a century. These embryonic tissues contribute to the development of the cranium and associated sensory organs, which were crucial for the evolution of the vertebrate "new head". A previous study suggests that rudimentary neural crest cells existed in ancestral chordates. However, the evolutionary origins of neurogenic placodes have remained obscure owing to a paucity of embryonic data from tunicates, the closest living relatives to those early vertebrates. Here we show that the tunicate Ciona intestinalis exhibits a proto-placodal ectoderm (PPE) that requires inhibition of bone morphogenetic protein (BMP) and expresses the key regulatory determinant Six1/2 and its co-factor Eya, a developmental process conserved across vertebrates. The Ciona PPE is shown to produce ciliated neurons that express genes for gonadotropin-releasing hormone (GnRH), a G-protein-coupled receptor for relaxin-3 (RXFP3) and a functional cyclic nucleotide-gated channel (CNGA), which suggests dual chemosensory and neurosecretory activities. These observations provide evidence that Ciona has a neurogenic proto-placode, which forms neurons that appear to be related to those derived from the olfactory placode and hypothalamic neurons of vertebrates. We discuss the possibility that the PPE-derived GnRH neurons of Ciona resemble an ancestral cell type, a progenitor to the complex neuronal circuit that integrates sensory information and neuroendocrine functions in vertebrates.
Observational studies of the clearing phase in proto-planetary disk systems
NASA Technical Reports Server (NTRS)
Grady, Carol A.
1994-01-01
A summary of the work completed during the first year of a 5 year program to observationally study the clearing phase of proto-planetary disks is presented. Analysis of archival and current IUE data, together with supporting optical observations has resulted in the identification of 6 new proto-planetary disk systems associated with Herbig Ae/Be stars, the evolutionary precursors of the beta Pictoris system. These systems exhibit large amplitude light and optical color variations which enable us to identify additional systems which are viewed through their circumstellar disks including a number of classical T Tauri stars. On-going IUE observations of Herbig Ae/Be and T Tauri stars with this orientation have enabled us to detect bipolar emission plausibly associated with disk winds. Preliminary circumstellar extinction studies were completed for one star, UX Ori. Intercomparison of the available sample of edge-on systems, with stars ranging from 1-6 solar masses, suggests that the signatures of accreting gas, disk winds, and bipolar flows and the prominence of a dust-scattered light contribution to the integrated light of the system decreases with decreasing IR excess.
Camelio, Giovanni; Lovato, Alessandro; Gualtieri, Leonardo; ...
2017-08-30
In a core-collapse supernova, a huge amount of energy is released in the Kelvin-Helmholtz phase subsequent to the explosion, when the proto-neutron star cools and deleptonizes as it loses neutrinos. Most of this energy is emitted through neutrinos, but a fraction of it can be released through gravitational waves. We model the evolution of a proto-neutron star in the Kelvin-Helmholtz phase using a general relativistic numerical code, and a recently proposed finite temperature, many-body equation of state; from this we consistently compute the diffusion coefficients driving the evolution. To include the many-body equation of state, we develop a new fittingmore » formula for the high density baryon free energy at finite temperature and intermediate proton fraction. Here, we estimate the emitted neutrino signal, assessing its detectability by present terrestrial detectors, and we determine the frequencies and damping times of the quasinormal modes which would characterize the gravitational wave signal emitted in this stage.« less
DOE Office of Scientific and Technical Information (OSTI.GOV)
Camelio, Giovanni; Lovato, Alessandro; Gualtieri, Leonardo
In a core-collapse supernova, a huge amount of energy is released in the Kelvin-Helmholtz phase subsequent to the explosion, when the proto-neutron star cools and deleptonizes as it loses neutrinos. Most of this energy is emitted through neutrinos, but a fraction of it can be released through gravitational waves. We model the evolution of a proto-neutron star in the Kelvin-Helmholtz phase using a general relativistic numerical code, and a recently proposed finite temperature, many-body equation of state; from this we consistently compute the diffusion coefficients driving the evolution. To include the many-body equation of state, we develop a new fittingmore » formula for the high density baryon free energy at finite temperature and intermediate proton fraction. Here, we estimate the emitted neutrino signal, assessing its detectability by present terrestrial detectors, and we determine the frequencies and damping times of the quasinormal modes which would characterize the gravitational wave signal emitted in this stage.« less
Differential interaction of porphyrins used in photoradiation therapy with ferrochelatase.
Dailey, H A; Smith, A
1984-01-01
The mechanism of porphyrin accumulation by tumours is not yet established. If metabolism aids porphyrin elimination, tumours, unlike normal tissues, may not metabolize porphyrins used clinically, such as proto-, haemato-, OO'-diacetyl-haemato- and monohydroxyethyl-monovinyl-deutero-porphyrin. Proto-, haemato- and monohydroxyethyl-monovinyl-deutero-porphyrin are substrates for the mitochondrial enzyme ferrochelatase (EC 4.99.1.1), which can form haem analogues from exogenous porphyrins. The Km values for proto-, haemato- and monohydroxyethyl-monovinyl-deutero-porphyrin are 11, 22 and 23 microM respectively. However, OO'-diacetyl-haematoporphyrin is an effective competitive inhibitor with Ki of 11 microM. Hepatic ferrochelatase specific activity is 5.9 and 5.5 nmol of haem/h per mg of protein respectively in normal Buffalo rat and in those bearing the extrahepatic Morris 7288C hepatoma, and is only 0.13 nmol/h per mg in the hepatomas. Therefore low ferrochelatase activity in cancerous cells may provide one means whereby some porphyrins accumulate in tumours, and the ability of certain porphyrins to act as ferrochelatase inhibitors may provide another. PMID:6497856
Expression of nuclear proto-oncogenes in isoproterenol-induced cardiac hypertrophy.
Brand, T; Sharma, H S; Schaper, W
1993-11-01
Rat hearts infused with the beta-adrenergic agonist isoproterenol were examined for the expression of several nuclear proto-oncogenes (c-fos, fosB, c-jun, junB, and junD) and the immediate early gene Egr-1. During the first 24 h after the start of infusion, a strong but transient expression of c-fos was observed. Expression of c-jun and junD were not elevated whereas junB was. By using specific antagonists to the alpha- (prazosin) and beta-adrenergic receptor (propranolol), a beta-adrenoceptor-specific blockade of the isoproterenol-mediated nuclear response was demonstrated. In situ hybridization localized c-fos expression to cardiac myocytes. Labelling was distributed focally in the left and right ventricles, and was strong and homogeneous in the atria. In contrast to beta-adrenergic stimulation, alpha-adrenoceptor stimulation with phenylephrine and norepinephrine caused the induction of c-jun and Egr-1 in addition to the proto-oncogenes induced by isoproterenol. Thus distinct programs of early response gene expression were expressed in response to alpha- versus beta-adrenergic stimulation.
Ubiquitin-Dependent Regulation of the Mammalian Hippo Pathway: Therapeutic Implications for Cancer.
Nguyen, Thanh Hung; Kugler, Jan-Michael
2018-04-17
The Hippo pathway serves as a key barrier for oncogenic transformation. It acts by limiting the activity of the proto-oncogenes YAP and TAZ. Reduced Hippo signaling and elevated YAP/TAZ activities are frequently observed in various types of tumors. Emerging evidence suggests that the ubiquitin system plays an important role in regulating Hippo pathway activity. Deregulation of ubiquitin ligases and of deubiquitinating enzymes has been implicated in increased YAP/TAZ activity in cancer. In this article, we review recent insights into the ubiquitin-mediated regulation of the mammalian Hippo pathway, its deregulation in cancer, and possibilities for targeting the Hippo pathway through the ubiquitin system.
SOFIA: On the Pathway toward Habitable Worlds
NASA Astrophysics Data System (ADS)
Gehrz, R. D.; Angerhausen, D.; Becklin, E. E.; Greenhouse, M. A.; Horner, S.; Krabbe, A.; Swain, M. R.; Young, E. T.
2010-10-01
The U.S./German Stratospheric Observatory for Infrared Astronomy (SOFIA), a 2.5-meter infrared airborne telescope in a Boeing 747-SP, will conduct 0.3 - 1,600 μm photometric, spectroscopic, and imaging observations from altitudes as high as 45,000 ft., where the average atmospheric transmission is greater than 80 percent. SOFIA’s first light cameras and spectrometers, as well as future generations of instruments, will enable SOFIA to make unique contributions to the characterization of the physical properties of proto-planetary disks around young stellar objects and of the atmospheres of exoplanets that transit their parent stars. We describe several types of experiments that are being contemplated.
NASA Astrophysics Data System (ADS)
Droeger, J.; Burchard, M.; Lattard, D.
2011-12-01
Amorphous silicates of olivine and pyroxene composition are thought to be common constituents of circumstellar, interstellar, and interplanetary dust. In proto-planetary discs amorphous dust crystallize essentially as a result of thermal annealing. The present project aims at deciphering the kinetics of crystallization pyroxene in proto-planetary dust on the basis of experiments on amorphous thin films. The thin films are deposited on Si-wafers (111) by pulsed laser deposition (PLD). The thin films are completely amorphous, chemically homogeneous (on the MgSiO3 composition) and with a continuous and flat surface. They are subsequently annealed for 1 to 216 h at 1073K and 1098K in a vertical quench furnace and drop-quenched on a copper block. To monitor the progress of crystallization, the samples are characterized by AFM and SEM imaging and IR spectroscopy. After short annealing durations (1 to 12 h) AFM and SE imaging reveal small shallow polygonal features (diameter 0.5-1 μm; height 2-3 nm) evenly distributed at the otherwise flat surface of the thin films. These shallow features are no longer visible after about 3 h at 1098 K, resp. >12 h at 1073 K. Meanwhile, two further types of features appear small protruding pyramids and slightly depressed spherolites. The orders of appearance of these features depend on temperature, but both persist and steadily grow with increasing annealing duration. Their sizes can reach about 12 μm. From TEM investigations on annealed thin films on the Mg2SiO4 composition we know that these features represent crystalline sites, which can be surrounded by a still amorphous matrix (Oehm et al. 2010). A quantitative evaluation of the size of the features will give insights on the progress of crystallization. IR spectra of the unprocessed thin films show only broad bands. In contrast, bands characteristic of crystalline enstatite are clearly recognizable in annealed samples, e.g. after 12 h at 1078 K. Small bands can also be assigned to crystalline forsterite. Compared to the findings of Murata et al. (2009), our preliminary results point to smaller crystallization rates of enstatite from amorphous precursors.
Iskandar, William J; Handjaja, C T; Salama, N; Anasy, N; Ardianto, M F; Kusumadewi, D
2013-07-01
to investigate causal relationship between Ramadan fasting and acute diabetic complications in adult controlled type 2 diabetics. a Pubmed's Clinical Queries and Embase search was conducted and resulted in 2 useful articles: 1 systematic review and 1 cohort study to be critically appraised. the incidence of acute diabetic complications is higher during Ramadan, with the relative risk for adult type 2 diabetics who fast during Ramadan is 1.36 and number needed to harm 50. Ramadan fasting was related with acute diabetic complications in adult controlled type 2 diabetics, but the risk was only slightly higher. It is acceptable for type 2 diabetics to fast during Ramadan.
NASA Astrophysics Data System (ADS)
Hong, J.; Allen, B.; Grindlay, J.; Barthelemy, S.; Baker, R.; Garson, A.; Krawczynski, H.; Apple, J.; Cleveland, W. H.
2011-10-01
We successfully carried out the first high-altitude balloon flight of a wide-field hard X-ray coded-aperture telescope ProtoEXIST1, which was launched from the Columbia Scientific Balloon Facility at Ft. Sumner, New Mexico on October 9, 2009. ProtoEXIST1 is the first implementation of an advanced CdZnTe (CZT) imaging detector in our ongoing program to establish the technology required for next generation wide-field hard X-ray telescopes such as the High Energy Telescope (HET) in the Energetic X-ray Imaging Survey Telescope (EXIST). The CZT detector plane in ProtoEXIST1 consists of an 8×8 array of closely tiled 2 cm×2 cm×0.5 cm thick pixellated CZT crystals, each with 8×8 pixels, mounted on a set of readout electronics boards and covering a 256 cm2 active area with 2.5 mm pixels. A tungsten mask, mounted at 90 cm above the detector provides shadowgrams of X-ray sources in the 30-600 keV band for imaging, allowing a fully coded field of view of 9°×9° (and 19°×19° for 50% coding fraction) with an angular resolution of 20‧. In order to reduce the background radiation, the detector is surrounded by semi-graded (Pb/Sn/Cu) passive shields on the four sides all the way to the mask. On the back side, a 26 cm×26 cm×2 cm CsI(Na) active shield provides signals to tag charged particle induced events as well as ≳100keV background photons from below. The flight duration was only about 7.5 h due to strong winds (60 knots) at float altitude (38-39 km). Throughout the flight, the CZT detector performed excellently. The telescope observed Cyg X-1, a bright black hole binary system, for ˜1h at the end of the flight. Despite a few problems with the pointing and aspect systems that caused the telescope to track about 6.4° off the target, the analysis of the Cyg X-1 data revealed an X-ray source at 7.2σ in the 30-100 keV energy band at the expected location from the optical images taken by the onboard daytime star camera. The success of this first flight is very encouraging for the future development of the advanced CZT imaging detectors (ProtoEXIST2, with 0.6 mm pixels), which will take advantage of the modularization architecture employed in ProtoEXIST1.
Exclusion of linkage between RET and Neuronal Intestinal Dysplasia type B
DOE Office of Scientific and Technical Information (OSTI.GOV)
Barone, V.; Yin Luo; Brancolini, V.
1996-03-15
Neuronal Intestinal Dysplasia type B (NID B) is a complex alteration of the enteric nervous system belonging to the group of intestinal dysganglionoses which may involve rectum, colon, and small intestine. Second only to Hirschsprung diseases (HSCR), NID B is one of the most frequent causes of chronic constipation and pseudo-obstructive intestinal dysmotility. Since NID B is often associated with HSCR and point mutations in the RET proto-oncogene have been identified in HSCR patients, we analyzed two NID B pedigrees to investigate if RET mutations might cause also the NID B phenotype. Linkage analysis demonstrated that the NID B locusmore » is not linked to RET in the pedigrees analysed. Further genetic analyses will possibility improve the understanding of the cause and facilitate diagnostic procedures in NID B. 20 refs., 1 fig., 2 tabs.« less
Emergence of Life on Earth: A Physicochemical Jigsaw Puzzle.
Spitzer, Jan
2017-01-01
We review physicochemical factors and processes that describe how cellular life can emerge from prebiotic chemical matter; they are: (1) prebiotic Earth is a multicomponent and multiphase reservoir of chemical compounds, to which (2) Earth-Moon rotations deliver two kinds of regular cycling energies: diurnal electromagnetic radiation and seawater tides. (3) Emerging colloidal phases cyclically nucleate and agglomerate in seawater and consolidate as geochemical sediments in tidal zones, creating a matrix of microspaces. (4) Some microspaces persist and retain memory from past cycles, and others re-dissolve and re-disperse back into the Earth's chemical reservoir. (5) Proto-metabolites and proto-biopolymers coevolve with and within persisting microspaces, where (6) Macromolecular crowding and other non-covalent molecular forces govern the evolution of hydrophilic, hydrophobic, and charged molecular surfaces. (7) The matrices of microspaces evolve into proto-biofilms of progenotes with rudimentary but evolving replication, transcription, and translation, enclosed in unstable cell envelopes. (8) Stabilization of cell envelopes 'crystallizes' bacteria-like genetics and metabolism with low horizontal gene transfer-life 'as we know it.' These factors and processes constitute the 'working pieces' of the jigsaw puzzle of life's emergence. They extend the concept of progenotes as the first proto-cellular life, connected backward in time to the cycling chemistries of the Earth-Moon planetary system, and forward to the ancient cell cycle of first bacteria-like organisms. Supra-macromolecular models of 'compartments first' are preferred: they facilitate macromolecular crowding-a key abiotic/biotic transition toward living states. Evolutionary models of metabolism or genetics 'first' could not have evolved in unconfined and uncrowded environments because of the diffusional drift to disorder mandated by the second law of thermodynamics.
3D modelling of HCO+ and its isotopologues in the low-mass proto-star IRAS16293-2422
NASA Astrophysics Data System (ADS)
Quénard, D.; Bottinelli, S.; Caux, E.; Wakelam, V.
2018-07-01
Ions and electrons play an important role in various stages of the star formation process. By following the magnetic field of their environment and interacting with neutral species, they slow down the gravitational collapse of the proto-star envelope. This process (known as ambipolar diffusion) depends on the ionization degree, which can be derived from the HCO+ abundance. We present a study of HCO+ and its isotopologues (H13CO+ , HC18O+ , DCO+ , and D13CO+) in the low-mass proto-star IRAS16293-2422. The structure of this object is complex, and the HCO+emission arises from the contribution of a young NW-SE outflow, the proto-stellar envelope, and the foreground cloud. We aim at constraining the physical parameters of these structures using all the observed transitions. For the young NW-SE outflow, we derive Tkin= 180-220 K and n(H2) = (4-7)× 106 cm-3 with an HCO+abundance of (3-5)× 10-9. Following previous studies, we demonstrate that the presence of a cold (Tkin≤ 30 K) and low density [n(H2) ≤ 1 × 104 cm-3] foreground cloud is also necessary to reproduce the observed line profiles. We have used the gas-grain chemical code NAUTILUS to derive the HCO+ abundance profile across the envelope and the external regions where X(HCO+) ≳ 1 × 10-9 dominate the envelope emission. From this, we derive an ionization degree of 10-8.9 ≲ x( e) ≲ 10-7.9. The ambipolar diffusion time-scale is ˜5 times the free-fall time-scale, indicating that the magnetic field starts to support the source against gravitational collapse and the magnetic field strength is estimated to be 6-46μG.
Vestiges of the proto-Caribbean seaway: Origin of the San Souci Volcanic Group, Trinidad
NASA Astrophysics Data System (ADS)
Neill, Iain; Kerr, Andrew C.; Chamberlain, Kevin R.; Schmitt, Axel K.; Urbani, Franco; Hastie, Alan R.; Pindell, James L.; Barry, Tiffany L.; Millar, Ian L.
2014-06-01
Outcrops of volcanic-hypabyssal rocks in Trinidad document the opening of the proto-Caribbean seaway during Jurassic-Cretaceous break-up of the Americas. The San Souci Group on the northern coast of Trinidad comprises the San Souci Volcanic Formation (SSVF) and passive margin sediments of the ~ 130-125 Ma Toco Formation. The Group was trapped at the leading edge of the Pacific-derived Caribbean Plate during the Cretaceous-Palaeogene, colliding with the para-autochthonous margin of Trinidad during the Oligocene-Miocene. In-situ U-Pb ion probe dating of micro-zircons from a mafic volcanic breccia reveal the SSVF crystallised at 135.0 ± 7.3 Ma. The age of the SSVF is within error of the age of the Toco Formation. Assuming a conformable contact, geodynamic models indicate a likely origin for the SSVF on the passive margin close to the northern tip of South America. Immobile element and Nd-Hf radiogenic isotope signatures of the mafic rocks indicate the SSVF was formed by ≪10% partial melting of a heterogeneous spinel peridotite source with no subduction or continental lithospheric mantle component. Felsic breccias within the SSVF are more enriched in incompatible elements, with isotope signatures that are less radiogenic than the mafic rocks of the SSVF. The felsic rocks may be derived from re-melting of mafic crust. Although geochemical comparisons are drawn here with proto-Caribbean igneous outcrops in Venezuela and elsewhere in the Caribbean more work is needed to elucidate the development of the proto-Caribbean seaway and its rifted margins. In particular, ion probe dating of micro-zircons may yield valuable insights into magmatism and metamorphism in the Caribbean, and in altered basaltic terranes more generally.
Building large area CZT imaging detectors for a wide-field hard X-ray telescope—ProtoEXIST1
NASA Astrophysics Data System (ADS)
Hong, J.; Allen, B.; Grindlay, J.; Chammas, N.; Barthelemy, S.; Baker, R.; Gehrels, N.; Nelson, K. E.; Labov, S.; Collins, J.; Cook, W. R.; McLean, R.; Harrison, F.
2009-07-01
We have constructed a moderately large area (32cm), fine pixel (2.5 mm pixel, 5 mm thick) CZT imaging detector which constitutes the first section of a detector module (256cm) developed for a balloon-borne wide-field hard X-ray telescope, ProtoEXIST1. ProtoEXIST1 is a prototype for the High Energy Telescope (HET) in the Energetic X-ray imaging Survey Telescope (EXIST), a next generation space-borne multi-wavelength telescope. We have constructed a large (nearly gapless) detector plane through a modularization scheme by tiling of a large number of 2cm×2cm CZT crystals. Our innovative packaging method is ideal for many applications such as coded-aperture imaging, where a large, continuous detector plane is desirable for the optimal performance. Currently we have been able to achieve an energy resolution of 3.2 keV (FWHM) at 59.6 keV on average, which is exceptional considering the moderate pixel size and the number of detectors in simultaneous operation. We expect to complete two modules (512cm) within the next few months as more CZT becomes available. We plan to test the performance of these detectors in a near space environment in a series of high altitude balloon flights, the first of which is scheduled for Fall 2009. These detector modules are the first in a series of progressively more sophisticated detector units and packaging schemes planned for ProtoEXIST2 & 3, which will demonstrate the technology required for the advanced CZT imaging detectors (0.6 mm pixel, 4.5m area) required in EXIST/HET.
Kneller, James P.; Mauney, Alex W.
2013-08-23
Here, the transition probabilities describing the evolution of a neutrino with a given energy along some ray through a turbulent supernova profile are random variates unique to each ray. If the proto-neutron-star source of the neutrinos were a point, then one might expect the evolution of the turbulence would cause the flavor composition of the neutrinos to vary in time i.e. the flavor would scintillate. But in reality the proto-neutron star is not a point source—it has a size of order ˜10km, so the neutrinos emitted from different points at the source will each have seen different turbulence. The finitemore » source size will reduce the correlation of the flavor transition probabilities along different trajectories and reduce the magnitude of the flavor scintillation. To determine whether the finite size of the proto-neutron star will preclude flavor scintillation, we calculate the correlation of the neutrino flavor transition probabilities through turbulent supernova profiles as a function of the separation δx between the emission points. The correlation will depend upon the power spectrum used for the turbulence, and we consider two cases: when the power spectrum is isotropic, and the more realistic case of a power spectrum which is anisotropic on large scales and isotropic on small. Although it is dependent on a number of uncalibrated parameters, we show the supernova neutrino source is not of sufficient size to significantly blur flavor scintillation in all mixing channels when using an isotropic spectrum, and this same result holds when using an anisotropic spectrum, except when we greatly reduce the similarity of the turbulence along parallel trajectories separated by ˜10km or less.« less
3D modelling of HCO+ and its isotopologues in the low-mass proto-star IRAS16293-2422
NASA Astrophysics Data System (ADS)
Quénard, D.; Bottinelli, S.; Caux, E.; Wakelam, V.
2018-04-01
Ions and electrons play an important role in various stages of the star formation process. By following the magnetic field of their environment and interacting with neutral species, they slow down the gravitational collapse of the proto-star envelope. This process (known as ambipolar diffusion) depends on the ionisation degree, which can be derived from the HCO+abundance. We present a study of HCO+and its isotopologues (H13CO+, HC18O+, DCO+, and D13CO+) in the low-mass proto-star IRAS16293-2422. The structure of this object is complex, and the HCO+emission arises from the contribution of a young NW-SE outflow, the proto-stellar envelope and the foreground cloud. We aim at constraining the physical parameters of these structures using all the observed transitions. For the young NW-SE outflow, we derive Tkin = 180 - 220 K and n(H2) = (4 - 7) × 106 cm-3 with an HCO+abundance of (3 - 5) × 10-9. Following previous studies, we demonstrate that the presence of a cold (Tkin≤30 K) and low density (n(H2) ≤ 1 × 104 cm-3) foreground cloud is also necessary to reproduce the observed line profiles. We have used the gas-grain chemical code NAUTILUS to derive the HCO+abundance profile across the envelope and the external regions where X(HCO+)≳ 1 × 10-9 dominate the envelope emission. From this, we derive an ionisation degree of 10-8.9 ≲ x(e) ≲ 10-7.9. The ambipolar diffusion timescale is ˜5 times the free-fall timescale, indicating that the magnetic field starts to support the source against gravitational collapse and the magnetic field strength is estimated to be 6 - 46 μG.
Deeb, Asma; Al Qahtani, Nabras; Akle, Mariette; Singh, Himanshi; Assadi, Rifah; Attia, Salima; Al Suwaidi, Hana; Hussain, Tara; Naglekerke, Nico
2017-04-01
Sick individuals and children are exempted from fasting Ramadan. Fasting by type 1 diabetes patients might predispose to acute complications. There are no guidelines on fasting safety or its impact on diabetes control in children and adolescents. We aim to assess patients' attitude towards fasting, frequency of complications and impact on glycemic control in children with type 1 diabetes. 65 children with type 1 diabetes were enrolled. The study involved 2 hospital visits. Questionnaires were filled in each visit and HbA1c was recorded. Log books indicating symptomatic hypoglycemia and hyperglycemia leading to breaking fast were obtained. Majority of subjects were willing to fast and 75% were encouraged by parents to do. 57% and 26% fasted more than half and all through the month respectively. 52% had, at least, one episode of hypoglycemia and 29% had hyperglycemia with one episode of ketoacidosis. All patients broke fast in response to symptomatic hypoglycemia/hyperglycemia. There was no significant difference between the frequency of complications in the pump or the Multiple Daily Injection (MDI) groups. Mean HbA1c increased from 70mmol/mol to 73mmol/mol. The difference was not statistically significant. Children and adolescents with type 1 diabetes are keen to fast Ramadan and they are able to fast a significant number of days. Hypoglycemia and hyperglycemia are not uncommon with no difference between Pump or in MDI users. Breaking fast on occurrence of complications makes fasting safe. Glycemic control might deteriorate during the month and the following Eid. Copyright © 2017 Elsevier B.V. All rights reserved.
Andruchov, Oleg; Andruchova, Olena; Wang, Yishu; Galler, Stefan
2006-02-15
Cross-bridge kinetics underlying stretch-induced force transients was studied in fibres with different myosin light chain (MLC) isoforms from skeletal muscles of rabbit and rat. The force transients were induced by stepwise stretches (< 0.3% of fibre length) applied on maximally Ca2+-activated skinned fibres. Fast fibre types IIB, IID (or IIX) and IIA and the slow fibre type I containing the myosin heavy chain isoforms MHC-IIb, MHC-IId (or MHC-IIx), MHC-IIa and MHC-I, respectively, were investigated. The MLC isoform content varied within fibre types. Fast fibre types contained the fast regulatory MLC isoform MLC2f and different proportions of the fast alkali MLC isoforms MLC1f and MLC3f. Type I fibres contained the slow regulatory MLC isoform MLC2s and the slow alkali MLC isoform MLC1s. Slow MLC isoforms were also present in several type IIA fibres. The kinetics of force transients differed by a factor of about 30 between fibre types (order from fastest to slowest kinetics: IIB > IID > IIA > I). The kinetics of the force transients was not dependent on the relative content of MLC1f and MLC3f. Type IIA fibres containing fast and slow MLC isoforms were about 1.2 times slower than type IIA fibres containing only fast MLC isoforms. We conclude that while the cross-bridge kinetics is mainly determined by the MHC isoforms present, it is affected by fast and slow MLC isoforms but not by the relative content of MLC1f and MLC3f. Thus, the physiological role of fast and slow MLC isoforms in type IIA fibres is a fine-tuning of the cross-bridge kinetics.
Effect of Ramadan fasting on glycemic control in patients with Type 2 diabetes.
Norouzy, A; Mohajeri, S M R; Shakeri, S; Yari, F; Sabery, M; Philippou, E; Varasteh, A-R; Nematy, M
2012-09-01
Although Muslim patients with Type 2 diabetes may be exempt from fasting during Ramadan for medical reasons, a high proportion of them fast. To investigate the association between Ramadan fasting and glycemic control in patients with Type 2 diabetes. A prospective cohort clinical trial was designed. Eighty-eight patients with Type 2 diabetes (45 male, 43 female, age 51±10 yr) who opted to fast for at least 10 days during the month of Ramadan were recruited. Fasting blood samples were taken at the beginning and end of Ramadan, and 1 month after Ramadan, to assess fasting blood glucose (FBG), fasting insulin, full blood count, glycated hemoglobin (HbA(1c)) and fasting lipid profile. Insulin resistance was estimated using the homeostatic model assessment. Anthropometrics and blood pressure were also measured. There was a significant deterioration in FBG and HbA(1c) (p=0.002 and p≤0.001, respectively) and significant improvements in HDL and LDL cholesterol and body mass index after Ramadan (p<0.001). Interestingly, HbA(1c) showed a reduction 1 month after Ramadan (9.4±2% at the end of Ramadan vs 8.4±2.5% 1 month after Ramadan; p<0.001). Results from this study showed that fasting during Ramadan deteriorated the glycemic control in Type 2 diabetes patients. This was more evident in patients using oral hypoglycemic medication than diet- controlled patients. However, Ramadan fasting had small positive effects on lipid profile and body weight.
NASA Astrophysics Data System (ADS)
Ramos-Larios, G.; Santamaría, E.; Guerrero, M. A.; Marquez-Lugo, R. A.; Sabin, L.; Toalá, J. A.
2016-10-01
Evolved stars such as asymptotic giant branch stars (AGB), post-AGB stars, proto-planetary nebulae (proto-PNe), and planetary nebulae (PNe) show rings and arcs around them and their nebular shells. We have searched for these morphological features in optical Hubble Space Telescope and mid-infrared Spitzer Space Telescope images of ˜650 proto-PNe and PNe and discovered them in 29 new sources. Adding those to previous detections, we derive a frequency of occurrence ≃8 per cent. All images have been processed to remove the underlying envelope emission and enhance outer faint structures to investigate the spacing between rings and arcs and their number. The averaged time lapse between consecutive rings and arcs is estimated to be in the range 500-1200 yr. The spacing between them is found to be basically constant for each source, suggesting that the mechanism responsible for the formation of these structures in the final stages of evolved stars is stable during time periods of the order of the total duration of the ejection. In our sample, this period of time spans ≤4500 yr.
Expression of hpttg proto-oncogene in lymphoid neoplasias.
Sáez, Carmen; Pereda, Teresa; Borrero, Juan J; Espina, Agueda; Romero, Francisco; Tortolero, María; Pintor-Toro, José A; Segura, Dolores I; Japón, Miguel A
2002-11-21
Pituitary tumor-transforming gene (pttg) is a distinct proto-oncogene which is expressed in certain normal tissues with high proliferation rate and in a variety of tumors. PTTG is the vertebrate analog of yeast securins Pds1 and Cut2 with a key role in the regulation of sister chromatid separation during mitosis. Impairment of PTTG regulated functions is expected to lead to chromosomal instability and aneuploidy. Human pttg (hpttg) is abundantly expressed in Jurkat T lymphoblastic lymphoma cells but not in normal peripheral blood leukocytes. To obtain additional data on the potential role of hpttg in lymphomagenesis we selected 150 cases of lymphoid tumors for the assessment of hpttg expression in tumor tissues. Immunohistochemical studies on formalin-fixed, paraffin-embedded tissues revealed hPTTG in 38.8% of B-cell lymphomas, 70.2% of T-cell lymphomas, and 73.1% of Hodgkin's lymphomas. Among B-cell lymphomas, the most frequently immunostained tumors were plasma cell tumors, diffuse large cell lymphomas, and follicle center cell lymphomas. In Hodgkin's disease, immunoreactivity was mainly noted in Reed-Sternberg cells. In conclusion, the frequent overexpression of hpttg in many histological subtypes of lymphoma suggests the involvement of this proto-oncogene in lymphomagenesis.
Fortunato, Laura; Jordan, Fiona
2010-01-01
Accurate reconstruction of prehistoric social organization is important if we are to put together satisfactory multidisciplinary scenarios about, for example, the dispersal of human groups. Such considerations apply in the case of Indo-European and Austronesian, two large-scale language families that are thought to represent Neolithic expansions. Ancestral kinship patterns have mostly been inferred through reconstruction of kin terminologies in ancestral proto-languages using the linguistic comparative method, and through geographical or distributional arguments based on the comparative patterns of kin terms and ethnographic kinship ‘facts’. While these approaches are detailed and valuable, the processes through which conclusions have been drawn from the data fail to provide explicit criteria for systematic testing of alternative hypotheses. Here, we use language trees derived using phylogenetic tree-building techniques on Indo-European and Austronesian vocabulary data. With these trees, ethnographic data and Bayesian phylogenetic comparative methods, we statistically reconstruct past marital residence and infer rates of cultural change between different residence forms, showing Proto-Indo-European to be virilocal and Proto-Malayo-Polynesian uxorilocal. The instability of uxorilocality and the rare loss of virilocality once gained emerge as common features of both families. PMID:21041215
Globular clusters in high-redshift dwarf galaxies: a case study from the Local Group
NASA Astrophysics Data System (ADS)
Zick, Tom O.; Weisz, Daniel R.; Boylan-Kolchin, Michael
2018-06-01
We present the reconstructed evolution of rest-frame ultraviolet (UV) luminosities of the most massive Milky Way dwarf spheroidal satellite galaxy, Fornax, and its five globular clusters (GCs) across redshift, based on analysis of the stellar fossil record and stellar population synthesis modelling. We find that (1) Fornax's (proto-)GCs can generate 10-100 times more UV flux than the field population, despite comprising <˜{5} per cent of the stellar mass at the relevant redshifts; (2) due to their respective surface brightnesses, it is more likely that faint, compact sources in the Hubble Frontier Fields (HFFs) are GCs hosted by faint galaxies, than faint galaxies themselves. This may significantly complicate the construction of a galaxy UV luminosity function at z > 3. (3) GC formation can introduce order-of-magnitude errors in abundance matching. We also find that some compact HFF objects are consistent with the reconstructed properties of Fornax's GCs at the same redshifts (e.g. surface brightness, star formation rate), suggesting we may have already detected proto-GCs in the early Universe. Finally, we discuss the prospects for improving the connections between local GCs and proto-GCs detected in the early Universe.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Neal, C.R.; Davidson, J.P.
The Malaitan alnoite contains a rich and varied megacryst suite of unprecedented compositional range. The authors have undertaken trace element and isotope modeling in order to formulate a petrogenetic scheme which links the host alnoeite to its entrained megacrysts. This requires that a proto-alnoeite magma is the product of zone refining initiated by diapiric upwelling (where the initial melt passes through 200 times its volume of mantle). Isotopic evidence indicates the source of the proto-alnoeite contains a time-integrated LREE-depleted signature. Impingement upon the rigid lithosphere halts or dramatically slows the upward progress of the mantle diapir. At this point, themore » magma cools and megacryst fractionation begins with augites crystallizing first, followed by subcalcic diopsides and finally phlogopites. Garnet probably crystallizes over the entire range of clinopyroxene fractionation. Estimated proportions of fractionating phases are 30% augite, 24.5% subcalcic diopside, 27% garnet, 12.9% phlogopite, 5% bronzite, 0.5% ilmenite, and 0.1% zircon. As this proto-alnoeite magma crystallizes, it assimilates a subducted component of seawater-altered basalt which underplates the Ontong Java Plateau. This is witnessed in the isotopic composition of the megacrysts and alnoeite.« less
NASA Astrophysics Data System (ADS)
Yücel Kaya, Mustafa; Dupont-Nivet, Guillaume; Proust, Jean-Noel; Bougeois, Laurie; Meijer, Niels; Frieling, Joost; Fioroni, Chiara; Stoica, Marius; Roperch, Pierrick; Mamtimin, Mehmut; Aminov, Jovid
2017-04-01
The Proto-Paratethys, a shallow epicontinental sea, extended from Cretaceous to Paleogene times across Eurasia from the Mediterranean Tethys to the Tarim Basin in western China. Transgressive and regressive episodes of the Proto-Paratethys Sea have been previously recognized but their timing, extent and depositional environments remain poorly constrained especially for the Cretaceous and early Paleogene. This hampers understanding of their driving mechanisms (geodynamic and/or eustatic) and paleoclimatic consequences on regional aridification and monsoons. As part of the ERC "MAGIC" project, we report an integrated sedimentologic and stratigraphic analysis of the Proto-Paratethys from its initial Cretaceous onset to the final Paleogene retreat from multiple investigated sections in the western border of Tarim Basin. Facies associations include field observations and microfacies analyses from carbonate samples. New bio- and magneto-stratigraphic results from key intervals are also provided to testify the previously constructed regional stratigraphic framework. The previously controversial number of marine incursions in the Tarim Basin is resolved to 6 (3 Cretaceous and 3 Paleogene) also recognized in the neighboring Tajik and Turan Basins to the west and the present-day Alai Valley. The eastward extent of these marine incursions varied through time with a maximum extent during late Paleocene - early Eocene. The first marine incursion is a Cenomanian transgression recorded in the marls and calcareous mudstones of the Kukebai Formation. The next two are Coniacian and Campanian transgressions recognized in the carbonate units of the Yigeziya Formation. The first Paleogene incursion is characterized by thick evaporites of the Paleocene Aertashi Formation overlain by the marine shales of the Lower Qimugen Formation. The latter represents the maximum extent and the deepest environments of the Proto-Paratethys. The marine Kalatar limestones and silty shales of the Wulagen Formation are associated with the penultimate transgression whereas the silty shales of the Bashibulake Formation were laid down during the last smaller marine incursion. Generally, transgressive intervals are composed of restricted marine bay environments, shoal & oyster-rich bioherms giving rise to upper offshore to shoreface transition silty shales. The regressive intervals are composed of intertidal flats, supratidal sabkhas and salinas, fluvial, playa and lake environments of alluvial plain. The temporal and spatial extent of the transgressive and regressive intervals enable to discriminate the major drivers of marine fluctuations with their potential consequences on Asian aridification and monsoons.
Kolossov, Vladimir L; Kopetz, Karen J; Rebeiz, Constantin A
2003-08-01
The thorough understanding of photosynthetic membrane assembly requires a deeper knowledge of the coordination of chlorophyll (Chl) and thylakoid apoprotein biosynthesis. As a working model for future investigations, we have proposed three Chl-thylakoid apoprotein biosynthesis models, namely, a single-branched Chl biosynthetic pathway (SBP) single-location model, an SBP multilocation model and a multibranched Chl biosynthetic pathway (MBP) sublocation model. Rejection or validation of these models can be probed by determination of resonance excitation energy transfer between various tetrapyrrole intermediates of the Chl biosynthetic pathway and various thylakoid Chl-protein complexes. In this study we describe the detection of resonance energy transfer between protoporphyrin IX (Proto), Mg-Proto and its monomethyl ester (Mp(e)) and divinyl and monovinyl protochlorophyllide a (Pchlide a) and several Chl-protein complexes. Induction of various amounts of tetrapyrrole accumulation in green photoperiodically grown cucumber cotyledons and barley leaves was achieved by dark incubation of excised tissues with delta-aminolevulinic acid (ALA) and various concentrations of 2,2'-dipyridyl for various periods of time. Controls were incubated in distilled water. After plastid isolation, treated and control plastids were diluted in buffered glycerol to the same Chl concentration. Excitation spectra were then recorded at 77 K at emission maxima of about 686, 694 and 738 nm. Resonance excitation energy transfer from Proto, Mp(e) and Pchlide a to Chl-protein complexes emitting at 686, 694 and 738 nm was observed by calculation of treated minus control difference excitation spectra. The occurrence of resonance excitation energy transfer between anabolic tetrapyrroles and Chl-protein complexes appeared as well-defined excitation bands with excitation maxima corresponding to those of Proto, Mp(e) and Pchlide a. Furthermore, it appeared that resonance excitation energy transfer from multiple short-wavelength, medium-wavelength and long-wavelength Proto, Mp(e) and Chlide a sites to various Chl-protein complexes took place. Because resonance excitation transfer from donors to acceptors cannot take place at distances larger than 100 A, it is proposed that the observed resonance excitation energy transfers are not compatible with the SBP single-location Chl biosynthesis thylakoid membrane biogenesis model. The latter assumes that a single-branched Chl biosynthetic pathway located in the center of a 450 x 130 A photosynthetic unit generates all of the Chl needed for the assembly of all Chl-protein complexes.
Myosin isoforms and contractile properties of single fibers of human Latissimus Dorsi muscle.
Paoli, Antonio; Pacelli, Quirico F; Cancellara, Pasqua; Toniolo, Luana; Moro, Tatiana; Canato, Marta; Miotti, Danilo; Reggiani, Carlo
2013-01-01
The aim of our study was to investigate fiber type distribution and contractile characteristics of Latissimus Dorsi muscle (LDM). Samples were collected from 18 young healthy subjects (9 males and 9 females) through percutaneous fine needle muscle biopsy. The results showed a predominance of fast myosin heavy chain isoforms (MyHC) with 42% of MyHC 2A and 25% of MyHC 2X, while MyHC 1 represented only 33%. The unbalance toward fast isoforms was even greater in males (71%) than in females (64%). Fiber type distribution partially reflected MyHC isoform distribution with 28% type 1/slow fibers and 5% hybrid 1/2A fibers, while fast fibers were divided into 30% type 2A, 31% type A/X, 4% type X, and 2% type 1/2X. Type 1/slow fibers were not only less abundant but also smaller in cross-sectional area than fast fibers. During maximal isometric contraction, type 1/slow fibers developed force and tension significantly lower than the two major groups of fast fibers. In conclusion, the predominance of fast fibers and their greater size and strength compared to slow fibers reveal that LDM is a muscle specialized mainly in phasic and powerful activity. Importantly, such specialization is more pronounced in males than in females.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Jacobsen, Stein B.
2009-05-28
The results of this project are the first experimental data on the behavior of metal-silicate mixtures under very high pressures and temperatures comparable to those of the putative Moon-forming impact experienced by Earth in its early history. Probably the most important outcome of this project was the discovery that metal-silicate interaction and equilibration during highly energetic transient events like impacts may be extremely fast and effective on relatively large scale that was not appreciated before. During the course of this project we have developed a technique for trapping supercritical melts produced in our experiments that allows studying chemical phenomena takingmore » place on a nanosecond timescales. Our results shed new light on the processes and conditions existed in the early Earth history, a subject of perennial interest of the humankind. The results of this project also provide important experimental constraints essential for development of the strategy and technology to mitigate imminent asteroid hazard.« less
DOE Office of Scientific and Technical Information (OSTI.GOV)
Wang, Hsiang-Hsu; Taam, Ronald E.; Yen, David C. C., E-mail: yen@math.fju.edu.tw
Investigating the evolution of disk galaxies and the dynamics of proto-stellar disks can involve the use of both a hydrodynamical and a Poisson solver. These systems are usually approximated as infinitesimally thin disks using two-dimensional Cartesian or polar coordinates. In Cartesian coordinates, the calculations of the hydrodynamics and self-gravitational forces are relatively straightforward for attaining second-order accuracy. However, in polar coordinates, a second-order calculation of self-gravitational forces is required for matching the second-order accuracy of hydrodynamical schemes. We present a direct algorithm for calculating self-gravitational forces with second-order accuracy without artificial boundary conditions. The Poisson integral in polar coordinates ismore » expressed in a convolution form and the corresponding numerical complexity is nearly linear using a fast Fourier transform. Examples with analytic solutions are used to verify that the truncated error of this algorithm is of second order. The kernel integral around the singularity is applied to modify the particle method. The use of a softening length is avoided and the accuracy of the particle method is significantly improved.« less
Preliminary test of the prototype modular cryostat for a 10 MW offshore superconducting wind turbine
NASA Astrophysics Data System (ADS)
Sun, Jiuce; Ramalingam, R.; Sanz, Santiago; Neumann, Holger
2017-02-01
The SUPerconducting Reliable lightweight And more POWERful offshore wind turbine (SUPRAPOWER), an EU FP7 funded research project, are under development for an innovative superconducting 10 MW class offshore wind turbine. Due to the requirements of handling, maintenance, reliability of long term and offshore operation, the cryostats are divided in two major parts: the modular cryostat able to accommodate a single coil and a thermal collector that links all the modules. The prototype modular cryostat was designed, manufactured and assembled in Karlsruhe Institute of Technology (KIT). The paper reports preliminary test results of proto-type modular cryostat with a two-stage Gifford-McMahon (GM) cryocooler.
Ubiquitin-Dependent Regulation of the Mammalian Hippo Pathway: Therapeutic Implications for Cancer
Nguyen, Thanh Hung
2018-01-01
The Hippo pathway serves as a key barrier for oncogenic transformation. It acts by limiting the activity of the proto-oncogenes YAP and TAZ. Reduced Hippo signaling and elevated YAP/TAZ activities are frequently observed in various types of tumors. Emerging evidence suggests that the ubiquitin system plays an important role in regulating Hippo pathway activity. Deregulation of ubiquitin ligases and of deubiquitinating enzymes has been implicated in increased YAP/TAZ activity in cancer. In this article, we review recent insights into the ubiquitin-mediated regulation of the mammalian Hippo pathway, its deregulation in cancer, and possibilities for targeting the Hippo pathway through the ubiquitin system. PMID:29673168
General Aspects of Colorectal Cancer
Centelles, Josep J.
2012-01-01
Colorectal cancer (CRC) is one of the main causes of death. Cancer is initiated by several DNA damages, affecting proto-oncogenes, tumour suppressor genes, and DNA repairing genes. The molecular origins of CRC are chromosome instability (CIN), microsatellite instability (MSI), and CpG island methylator phenotype (CIMP). A brief description of types of CRC cancer is presented, including sporadic CRC, hereditary nonpolyposis colorectal cancer (HNPCC) or Lynch syndromes, familiar adenomatous polyposis (FAP), MYH-associated polyposis (MAP), Peutz-Jeghers syndrome (PJS), and juvenile polyposis syndrome (JPS). Some signalling systems for CRC are also described, including Wnt-β-catenin pathway, tyrosine kinase receptors pathway, TGF-β pathway, and Hedgehog pathway. Finally, this paper describes also some CRC treatments. PMID:23209942
Garrity, P A; Rao, Y; Salecker, I; McGlade, J; Pawson, T; Zipursky, S L
1996-05-31
Mutations in the Drosophila gene dreadlocks (dock) disrupt photoreceptor cell (R cell) axon guidance and targeting. Genetic mosaic analysis and cell-type-specific expression of dock transgenes demonstrate dock is required in R cells for proper innervation. Dock protein contains one SH2 and three SH3 domains, implicating it in tyrosine kinase signaling, and is highly related to the human proto-oncogene Nck. Dock expression is detected in R cell growth cones in the target region. We propose Dock transmits signals in the growth cone in response to guidance and targeting cues. These findings provide an important step for dissection of signaling pathways regulating growth cone motility.
An Observational Study of Pulsations in Proto-Planetary Nebulae
NASA Astrophysics Data System (ADS)
Hrivnak, Bruce J.; Lu, Wenxian; Henson, Gary D.; Hillwig, Todd C.
2016-01-01
We have been carrying out a long-term monitoring program to study the light variability in proto-planetary nebulae (PPNe). PPNe are post-Asymptotic Giant Branch objects in transition between the AGB and PN phases in the evolution of low and intermediate-mass stars. As such, it is not surprising that they display pulsational variability. We have been carrying out photometric monitoring of 30 of these at the Valparaiso University campus observatory over the last 20 years, with the assistance of undergraduate students. The sample size has been enlarged over the past six years by observations made using telescopes in the SARA consortium at KPNO and CTIO. Periods have been determined for those of F-G spectral types. We have also enlarged the sample with PPNe from outside the Milky Way by determining periods of eight PPNe in the lower metalicity environment of the Magellanic Clouds. Periods for the entire sample range from 35 to 160 days. Some clear patterns have emerged, with those of higher temperature possessing shorter periods and smaller amplitudes, indicating a reduction in period and pulsation amplitude as the objects evolve. Radial velocity monitoring of several of the brightest of these has allowed us to document their changes in brightness, color, and size during a pulsation cycle. The results of this study will be presented. This research is supported by grants from the National Science Foundation (most recently AST 1413660), with additional student support from the Indiana Space Grant Consortium.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Nye, C.J.
1987-12-01
The Spurr Volcanic Complex (SVC) is a calcalkaline, medium-K, sequence of andesites erupted over the last quarter of a million years by the easternmost currently active volcanic center in the Aleutian Arc. The ancestral Mt. Spurr was built mostly of andesites of uniform composition (58 to 60% SiO/sub 2/), although andesite production was episodically interrupted by the introduction of new batches of more mafic magma. Near the end of the Pleistocene the ancestral Mt. Spurr underwent Bezyianny-type avalanche caldera formation, resulting in the production of a volcanic debris avalanche with overlying ashflows. Immediately afterward, a large dome (the present Mt.more » Spurr) was emplaced in the caldera. Both the ashflows and dome are made of acid andesite more silicic than any analyzed lavas from the ancestral Mt. Spurr (60 to 63% SiO/sub 2/), yet contain olivine and amphibole xenocrysts derived from more mafic magma. The mafic magma (53 to 57% SiO/sub 2/) erupted during and after dome emplacement, forming proto-Crater Peak and Crater Peak. Hybrid pyroclastic flows and lavas were also produced. Proto-Crater Peak underwent glacial dissection prior to the formation of Crater Peak in approximately the same location. Appendices II through VIII contain a summary of mineral compositions; Appendix I contains geochemical data. Appendix IX by R.J. Motyka and C.J. Nye describes the chemistry of geothermal fluids. 78 refs., 16 figs., 3 tabs.« less
Distinct Neural Stem Cell Populations Give Rise to Disparate Brain Tumors in Response to N-MYC
Swartling, Fredrik J.; Savov, Vasil; Persson, Anders I.; Chen, Justin; Hackett, Christopher S.; Northcott, Paul A.; Grimmer, Matthew R.; Lau, Jasmine; Chesler, Louis; Perry, Arie; Phillips, Joanna J.; Taylor, Michael D.; Weiss, William A.
2012-01-01
SUMMARY The proto-oncogene MYCN is mis-expressed in various types of human brain tumors. To clarify how developmental and regional differences influence transformation, we transduced wild-type or mutationally-stabilized murine N-mycT58A into neural stem cells (NSCs) from perinatal murine cerebellum, brain stem and forebrain. Transplantation of N-mycWT NSCs was insufficient for tumor formation. N-mycT58A cerebellar and brain stem NSCs generated medulloblastoma/primitive neuroectodermal tumors, whereas forebrain NSCs developed diffuse glioma. Expression analyses distinguished tumors generated from these different regions, with tumors from embryonic versus postnatal cerebellar NSCs demonstrating SHH-dependence and SHH-independence, respectively. These differences were regulated in-part by the transcription factor SOX9, activated in the SHH subclass of human medulloblastoma. Our results demonstrate context-dependent transformation of NSCs in response to a common oncogenic signal. PMID:22624711
Protocell design through modular compartmentalization
Miller, David; Booth, Paula J.; Seddon, John M.; Templer, Richard H.; Law, Robert V.; Woscholski, Rudiger; Ces, Oscar; Barter, Laura M. C.
2013-01-01
De novo synthetic biological design has the potential to significantly impact upon applications such as energy generation and nanofabrication. Current designs for constructing organisms from component parts are typically limited in scope, as they utilize a cut-and-paste ideology to create simple stepwise engineered protein-signalling pathways. We propose the addition of a new design element that segregates components into lipid-bound ‘proto-organelles’, which are interfaced with response elements and housed within a synthetic protocell. This design is inspired by living cells, which utilize multiple types of signalling molecules to facilitate communication between isolated compartments. This paper presents our design and validation of the components required for a simple multi-compartment protocell machine, for coupling a light transducer to a gene expression system. This represents a general design concept for the compartmentalization of different types of artificial cellular machinery and the utilization of non-protein signal molecules for signal transduction. PMID:23925982
Protocell design through modular compartmentalization.
Miller, David; Booth, Paula J; Seddon, John M; Templer, Richard H; Law, Robert V; Woscholski, Rudiger; Ces, Oscar; Barter, Laura M C
2013-10-06
De novo synthetic biological design has the potential to significantly impact upon applications such as energy generation and nanofabrication. Current designs for constructing organisms from component parts are typically limited in scope, as they utilize a cut-and-paste ideology to create simple stepwise engineered protein-signalling pathways. We propose the addition of a new design element that segregates components into lipid-bound 'proto-organelles', which are interfaced with response elements and housed within a synthetic protocell. This design is inspired by living cells, which utilize multiple types of signalling molecules to facilitate communication between isolated compartments. This paper presents our design and validation of the components required for a simple multi-compartment protocell machine, for coupling a light transducer to a gene expression system. This represents a general design concept for the compartmentalization of different types of artificial cellular machinery and the utilization of non-protein signal molecules for signal transduction.
Limited fiber type grouping in self-reinnervation cat tibialis anterior muscles.
Unguez, G A; Roy, R R; Bodine-Fowler, S; Edgerton, V R
1996-10-01
The percent and distribution patterns of three immunohistochemically identified fiber types within the anterior compartment of the cat tibialis anterior were determined 6 months after denervation and self-reinnervation. After self-reinnervation, mean frequencies of slow (9%) and fast (91%) fibers were similar to those in control (12% and 88%, respectively) muscles. However, a lower proportion of fast-1 (26%) and a higher proportion of fast-2 (65%) fibers were observed in self-reinnervated than control (32% and 56%) muscles. Quantitation of adjacencies between fibers of similar myosin heavy chain (MHC) phenotype, a measure of type grouping, revealed that the frequencies of two slow or two fast-1 fibers being adjacent in self-reinnervated muscles were similar to control. In contrast, the frequency of fast-2/fast-2 fiber adjacencies found in self-reinnervated muscles (45%) was significantly higher than in control muscles (37%). In both groups, the frequency of adjacencies between slow, fast-1, or fast-2 fibers was largely attributable to the number of each fiber type present. These data show that the incidence of grouping within each fiber type present was not altered after 6 months of self-reinnervation. Minimal changes in the spatial distribution of fiber types following self-reinnervation in adults suggests a limited degree of conversion of muscle fibers to a MHC phenotype matching the motoneuron characteristics.
Cesur, Mustafa; Corapcioglu, Demet; Gursoy, Alptekin; Gonen, Sait; Ozduman, Mine; Emral, Rifat; Uysal, Ali Riza; Tonyukuk, Vedia; Yilmaz, Arif Ender; Bayram, Fahri; Kamel, Nuri
2007-02-01
Although diabetics may be exempted from Ramadan fasting, many patients still insist on this worship. Aim of the present study is to compare the effects of glimepiride, repaglinide, and insulin glargine in type 2 diabetics during Ramadan fasting on the glucose metabolism. Patients, who were willing to fast, were treated with glimepiride (n=21), repaglinide (n=18), and insulin glargine (n=10). Sixteen non-fasting control type 2 diabetics matched for age, sex, and body mass index were also included. Fasting blood glucose (FBG), post-prandial blood glucose (PBG), HbA1c, and fructosamine as well as lipid metabolism were evaluated in pre-Ramadan, post-Ramadan, and 1-month post-Ramadan time points. There was no significant change from pre-Ramadan in FBG, PBG, and HbA1c variables in fasting diabetics at post-Ramadan and 1-month post-Ramadan. However, PBG was found higher in non-fasting control diabetics at post-Ramadan and 1-month post-Ramadan (p<0.05 and p<0.001, respectively). In fructosamine levels, a significant increase was noted both in fasting group and non-fasting group at 1-month post-Ramadan (p<0.01 for all). However, no significant difference was found in the comparison of the changes in fructosamine levels between fasting group and non-fasting group. Risk of hypoglycemia did not significantly differ between fasting and non-fasting diabetics. There was no significant difference between three drug therapies regarding glucose metabolism and rate of hypoglycemia. No adverse effects on plasma lipids were noted in fasting diabetics. In this fasting sample of patients with type 2 diabetes, glimepiride, repaglinide, and insulin glargine did not produce significant changes in glucose and lipid parameters.
Scaling Law of Impact Induced Shock Pressure in Planetary Mantle
NASA Astrophysics Data System (ADS)
Monteux, Julien; Arkani-Hamed, Jafar
2015-04-01
While hydrocode simulation of impact induced shock pressure inside planetary mantle is more accurate, it is not suitable for studying several hundreds of impacts occurring during the accretion of a planet. Not only simulation of each impact takes over two orders of magnitude longer computer time than that of a scaling law simulation [1], but also it is cumbersome to apply for growing proto-planets where size of a proto-planet and impact velocities of the accreting bodies increase significantly. This is compounded by the formation of the iron core during the accretion with increasing size. Major impacting bodies during accretion of a Mars type planet have very low velocities. We use iSale hydrocode simulations and adopt physical properties of dunite for the mantle to calculate shock pressure and particle velocity in a Mars type body for 11 impact velocities ranging from 4 to 60 km/s. Large impactors of 100 to 1000 km in diameter, comparable to those impacted on Mars and created giant impact basins, are examined. The results are in good agreement with those of Pierazzo et al. [2] which were calculated for impact velocities higher than 10 km/s and impactor of 0.2 to 10 km in diameter. The internal consistency of our models indicates that our scaling laws are also accurate for lower impact velocities. We found no distinct isobaric region, rather the peak shock pressure changes relatively slowly versus distance from the impact site in the near field zone, within ~ 3 times the impactor radius, compare to that in the far field zone as also suggested by Ahrens and O'Keefe [3]. Hence we propose two distinct scaling laws, the power law distribution of shock pressure P as a function of distance R from the impact site at the surface, one for the near field zone and the other for the far field zone: Log P = a + n Log (R/Rimp) With n = 1.72 - 2.44 Log(Vimp) for R < ~3 Rimp, and n = -0.84 -0.51 Log(Vimp) for R > ~3 Rimp where a is a constant, Rimp is the impactor radius, and Vimp (in km/s) is the impact velocity. The scaling law provides us a mean to determine impact heating of a growing proto-planet. We also show the effect of dynamic phase change in dunite at around 220 GPa during the passage of the shock wave occurring for impact velocities higher than 10 km/s. [1] Arkani-Hamed, J., and Ivanov, B., (2014), Phys. Earth Planet. Inter., 230, 45-59. [2] Pierazzo, E., Vickery, A.M., and Melosh, H.J., (1997), Icarus 127, 408-423. [3] Ahrens, T.J., and O'Keefe, J.D., (1987). Int. J. Impact Eng. 5, 13-32.
NASA Astrophysics Data System (ADS)
He, D.
2016-12-01
The Junggar Basin locates in the central part of Paleo-Asian Ocean tectonic domain, and records the dynamic processes of the Central Asian Orogenic Belt from subduction-accretion-collision to later intracontinental deformations. Carboniferous is the key period from subduction to closure in the tectonic evolution of Paleo-Asian Ocean. Based on the borehole, outcrop, seismic and gravity and magnetic anomaly data, the paper made analysis of the Carboniferous basin evolution.Geo-chronological results for the borehole volcanic rocks suggest that the Junggar Basin and adjacent area had five periods of volcanic activities, including two periods in the Early Carboniferous (359-347Ma 347-331Ma and 331-324Ma) and three periods in the Late Carboniferous (323-307Ma and 307-300Ma). Regional unconformities divided the Carboniferous into two tectono-stratigraphic sequences: Lower Carboniferous and Upper Carboniferous. The former is characterized by compressional structures and involves massive calc-alkaline basalts, andesites, dacites and rhyolites, whereas the later is mainly controlled by extensional faults and dominated by intermediate-mafic volcanic rocks, with bimodal volcanic rocks in parts. The paper determined four Carboniferous arc-basin belts in the Junggar Basin and adjacent area from north to south: the Saur-Fuhai-Dulate, Heshituoluogai-Wulungu-Yemaquan, Darbut-Luliang-Karamaili, and Zhongguai-Mosuowan-Baijiahai-Qitai, and identified multi-type basins, such as fore-arc basin, retro-arc basin, intra-arc rift basin, foreland basin and passive continental margin basin,etc.. The Carboniferous proto-type basin evolution of the Junggar Basin can be divided into three phases such as, the early to middle Early Carboniferous subduction-related compressional phase, the late Early Carboniferous to middle Late Carboniferous subduction-related extensional phase and the late Late Carboniferous intra-continental fault-sag phase. The study discloses that the Junggar Basin is likely underlain by juvenile continental crust rather than unified Precambrian basement, and also implies that the Junggar Basin and adjacent area, even the entire CAOB, were built by successively northward amalgamation of multiple linear arc-basin systems characterized by southward accretion.
Zhang, H; Xu, W; Dahl, A K; Xu, Z; Wang, H-X; Qi, X
2013-05-01
Studies on the relationship between socio-economic status and Type 2 diabetes mellitus in the Chinese population are sparse. We aimed to examine the relation of socio-economic status as represented by income, education and occupation to impaired fasting glucose, Type 2 diabetes, and the control of Type 2 diabetes in a large Chinese population. This study included 7315 individuals who were aged 20-79 years and living in Tianjin, China. Impaired fasting glucose and Type 2 diabetes were ascertained according to the 1999 World Health Organization criteria. Data were analysed using multinomial and binary logistic regression, with adjustment for potential confounders. Among all participants, 532 (7.3%) persons had impaired fasting glucose, 688 (9.4%) persons had Type 2 diabetes, including 288 (3.9%) previously undiagnosed Type 2 diabetes. In fully adjusted multinomial logistic regression, compared with higher income (≥ 2000 yuan, $243.3/month), lower income (< 1000 yuan, $121.70/month) showed odds ratios (95% confidence intervals) of 3.31 (2.48-4.41) for impaired fasting glucose, 4.50 (3.07-6.61) for undiagnosed Type 2 diabetes and 4.56 (3.20-6.48) for diagnosed Type 2 diabetes. These results remained significant in the analysis stratified by education and occupation. Furthermore, persons who were retired were more likely to have impaired fasting glucose [odds ratio 1.91 (1.40-2.45)], undiagnosed Type 2 diabetes [odds ratio 2.01) 1.40-2.89] and diagnosed Type 2 diabetes [odds ratio 3.02 (2.12-4.22)]. Among the patients with Type 2 diabetes previously diagnosed, lower education (less than senior high school), non-manual work and unemployment were related to worse glycaemic control (fasting blood glucose level > 8.5 mmol/l). Lower income and retirement are associated with increased odds of impaired fasting glucose and Type 2 diabetes in Tianjin, China. Education and occupation may play a role in glycaemic control among patients with Type 2 diabetes. © 2013 The Authors. Diabetic Medicine © 2013 Diabetes UK.
Evaluation of Type II Fast Packs for Electrostatic Discharge Properties.
1983-08-01
34 x 8" x 1 3/4") consisting of a reclosable cushioned carrier which mates into an outer fiberboard sleeve. A cushioning insert is used consisting of a... RECLOSABLE CUSHIONED CARRIER TEST LOAD FIGURE 1: Cancel Caddy Pack * CONVOLUTED 4* CUSHIONED I FIGURE 2: Type II Fast Pack (PPP-B-1672) TYPE II FAST PACK
Faraday-cup-type lost fast ion detector on Heliotron J.
Yamamoto, S; Ogawa, K; Isobe, M; Darrow, D S; Kobayashi, S; Nagasaki, K; Okada, H; Minami, T; Kado, S; Ohshima, S; Weir, G M; Nakamura, Y; Konoshima, S; Kemmochi, N; Ohtani, Y; Mizuuchi, T
2016-11-01
A Faraday-cup type lost-fast ion probe (FLIP) has been designed and installed in Heliotron J for the purpose of the studies of interaction between fast ions and MHD instabilities. The FLIP can measure the co-going fast ions whose energy is in the range of 1.7-42.5 keV (proton) and pitch angle of 90 ∘ -140 ∘ , especially for fast ions having the injection energy of neutral beam injection (NBI). The FLIP successfully measured the re-entering passing ions and trapped lost-fast ions caused by fast-ion-driven energetic particle modes in NBI heated plasmas.
Testing the Formation Mechanism of Sub-Stellar Objects in Lupus (A SOLA Team Study)
NASA Astrophysics Data System (ADS)
De Gregorio-Monsalvo, Itziar; Lopez, C.; Takahashi, S.; Santamaria-Miranda
2017-06-01
The international SOLA team (Soul of Lupus with ALMA) has identified a set of pre- and proto-stellar candidates in Lupus 1 and 3 of substellar nature using 1.1mm ASTE/AzTEC maps and our optical to submillimeter database. We have observed with ALMA the most promising pre- and proto-brown dwarfs candidates. Our aims are to provide insights on how substellar objects form and evolve, from the equivalent to the pre-stellar cores to the Class II stage in the low mass regime of star formation. Our sample comprises 33 pre-stellar objects, 7 Class 0 and I objects, and 22 Class II objects.
Fermented beverages of pre- and proto-historic China.
McGovern, Patrick E; Zhang, Juzhong; Tang, Jigen; Zhang, Zhiqing; Hall, Gretchen R; Moreau, Robert A; Nuñez, Alberto; Butrym, Eric D; Richards, Michael P; Wang, Chen-Shan; Cheng, Guangsheng; Zhao, Zhijun; Wang, Changsui
2004-12-21
Chemical analyses of ancient organics absorbed into pottery jars from the early Neolithic village of Jiahu in Henan province in China have revealed that a mixed fermented beverage of rice, honey, and fruit (hawthorn fruit and/or grape) was being produced as early as the seventh millennium before Christ (B.C.). This prehistoric drink paved the way for unique cereal beverages of the proto-historic second millennium B.C., remarkably preserved as liquids inside sealed bronze vessels of the Shang and Western Zhou Dynasties. These findings provide direct evidence for fermented beverages in ancient Chinese culture, which were of considerable social, religious, and medical significance, and help elucidate their earliest descriptions in the Shang Dynasty oracle inscriptions.
Fermented beverages of pre- and proto-historic China
McGovern, Patrick E.; Zhang, Juzhong; Tang, Jigen; Zhang, Zhiqing; Hall, Gretchen R.; Moreau, Robert A.; Nuñez, Alberto; Butrym, Eric D.; Richards, Michael P.; Wang, Chen-shan; Cheng, Guangsheng; Zhao, Zhijun; Wang, Changsui
2004-01-01
Chemical analyses of ancient organics absorbed into pottery jars from the early Neolithic village of Jiahu in Henan province in China have revealed that a mixed fermented beverage of rice, honey, and fruit (hawthorn fruit and/or grape) was being produced as early as the seventh millennium before Christ (B.C.). This prehistoric drink paved the way for unique cereal beverages of the proto-historic second millennium B.C., remarkably preserved as liquids inside sealed bronze vessels of the Shang and Western Zhou Dynasties. These findings provide direct evidence for fermented beverages in ancient Chinese culture, which were of considerable social, religious, and medical significance, and help elucidate their earliest descriptions in the Shang Dynasty oracle inscriptions. PMID:15590771
NASA Astrophysics Data System (ADS)
Abelson, Meir; Erez, Jonathan
2017-06-01
A compilation of benthic δ18O from the whole Atlantic and the Southern Ocean (Atlantic sector) shows two major jumps in the interbasinal gradient of δ18O (Δδ18O) during the Eocene and the Oligocene: one at ˜40 Ma and the second concomitant with the isotopic event of the Eocene-Oligocene transition (EOT), ˜33.7 Ma ago. From previously published circulation models and proxies, we show that the first Δδ18O jump reflects the thermal isolation of Antarctica associated with the proto-Antarctic circumpolar current (ACC). The second marks the onset of interhemispheric northern-sourced circulation cell, similar to the modern Atlantic meridional overturning circulation (AMOC). The onset of AMOC-like circulation slightly preceded (100-300 kyr) the EOT, as we show by the high-resolution profiles of δ18O and δ13C previously published from DSDP/ODP sites in the Southern Ocean and South Atlantic. These events coincide with the onset of antiestuarine circulation between the Nordic seas and the North Atlantic which started around the EOT and may be connected to the deepening of the Greenland-Scotland Ridge. We suggest that while the shallow proto-ACC supplied the energy for deep ocean convection in the Southern Hemisphere, the onset of the interhemispheric northern circulation cell was due to the significant EOT intensification of deepwater formation in the North Atlantic driven by the Nordic antiestuarine circulation. This onset of the interhemispheric northern-sourced circulation cell could have prompted the EOT global cooling.
Fiber transformation and replacement in low-frequency stimulated rabbit fast-twitch muscles.
Schuler, M; Pette, D
1996-08-01
The fast-to-slow conversion of rabbit skeletal muscles by chronic low-frequency (10 Hz, 12 h daily) stimulation involves (1) sequential fast-to-slow fiber-type transitions in the order of type IID-->type IIA-->type I, and (2) the replacement of deteriorating fast-twitch glycolytic fibers by new fibers derived from satellite cells and myotubes. These two processes were analyzed in 30- and 60-day stimulated extensor digitorum longus and tibialis anterior muscles. Fast-to-slow transforming fibers were identified by myofibrillar actomyosin histochemistry as type C fibers and immunohistochemically by their reaction with monoclonal antibodies specific to slow and fast myosin heavy chain isoforms. In situ hybridization of mRNA specific to the myosin heavy chain I isoform identified all fibers expressing slow myosin, i.e., type I and C fibers. The fraction of transforming fibers ranged between 35% and 50% in 30-day stimulated muscles. The percentage of type I fibers (20%) was threefold elevated in extensor digitorum longus muscle, but unaltered (3.5%) in tibialis anterior muscle, suggesting that fast-to-slow fiber conversion was more advanced in the former than in the latter. Fiber replacement was indicated by the finding that the fiber populations of both muscles contained 15% myotubes or small fibers with central nuclei. In situ hybridization revealed that myotubes and small regenerating fibers uniformly expressed myosin heavy chain I mRNA. Similarly, high percentages of slow-myosin-expressing myotubes and small fibers were found in 60-day stimulated muscles.
Earth's oldest stable crust in the Pilbara Craton formed by cyclic gravitational overturns
NASA Astrophysics Data System (ADS)
Wiemer, Daniel; Schrank, Christoph E.; Murphy, David T.; Wenham, Lana; Allen, Charlotte M.
2018-05-01
During the early Archaean, the Earth was too hot to sustain rigid lithospheric plates subject to Wilson Cycle-style plate tectonics. Yet by that time, up to 50% of the present-day continental crust was generated. Preserved continental fragments from the early Archaean have distinct granite-dome/greenstone-keel crust that is interpreted to be the result of a gravitationally unstable stratification of felsic proto-crust overlain by denser mafic volcanic rocks, subject to reorganization by Rayleigh-Taylor flow. Here we provide age constraints on the duration of gravitational overturn in the East Pilbara Terrane. Our U-Pb ages indicate the emplacement of 3,600-3,460-million-year-old granitoid rocks, and their uplift during an overturn event ceasing about 3,413 million years ago. Exhumation and erosion of this felsic proto-crust accompanied crustal reorganization. Petrology and thermodynamic modelling suggest that the early felsic magmas were derived from the base of thick ( 43 km) basaltic proto-crust. Combining our data with regional geochronological studies unveils characteristic growth cycles on the order of 100 million years. We propose that maturation of the early crust over three of these cycles was required before a stable, differentiated continent emerged with sufficient rigidity for plate-like behaviour.
Missing link in the evolution of Hox clusters.
Ogishima, Soichi; Tanaka, Hiroshi
2007-01-31
Hox cluster has key roles in regulating the patterning of the antero-posterior axis in a metazoan embryo. It consists of the anterior, central and posterior genes; the central genes have been identified only in bilaterians, but not in cnidarians, and are responsible for archiving morphological complexity in bilaterian development. However, their evolutionary history has not been revealed, that is, there has been a "missing link". Here we show the evolutionary history of Hox clusters of 18 bilaterians and 2 cnidarians by using a new method, "motif-based reconstruction", examining the gain/loss processes of evolutionarily conserved sequences, "motifs", outside the homeodomain. We successfully identified the missing link in the evolution of Hox clusters between the cnidarian-bilaterian ancestor and the bilaterians as the ancestor of the central genes, which we call the proto-central gene. Exploring the correspondent gene with the proto-central gene, we found that one of the acoela Hox genes has the same motif repertory as that of the proto-central gene. This interesting finding suggests that the acoela Hox cluster corresponds with the missing link in the evolution of the Hox cluster between the cnidarian-bilaterian ancestor and the bilaterians. Our findings suggested that motif gains/diversifications led to the explosive diversity of the bilaterian body plan.
Major global radiation of corvoid birds originated in the proto-Papuan archipelago
Jønsson, Knud A.; Fabre, Pierre-Henri; Ricklefs, Robert E.; Fjeldså, Jon
2011-01-01
A central paradigm in island biogeography has been the unidirectional “downstream” colonization of islands from continents (source to sink) based on the idea that less-diverse island communities are easier to invade than biologically more-diverse continental communities. Recently, several cases of “upstream” colonization (from islands to continents) have been documented, challenging the traditional view. However, all these cases have involved individual island species that have colonized mainland regions. Here, using molecular phylogenetic data, divergence time estimates, lineage diversity distributions, and ancestral area analyses, we reconstruct the spread of a species-rich (>700 species) passerine bird radiation (core Corvoidea) from its late Eocene/Oligocene origin in the emerging proto-Papuan archipelago north of Australia, including multiple colonizations from the archipelago to Southeast Asia. Thus, islands apparently provided the setting for the initiation of a major songbird radiation that subsequently invaded all other continents. Morphological and behavioral adaptations of the core Corvoidea as generalist feeders in open habitats, which facilitated dispersal and colonization, apparently evolved in the descendants of sedentary forest birds that invaded the proto-Papuan archipelago. The archipelago evidently provided islands of the right size, number, and proximity to continental areas to support the adaptation and diversification of vagile colonizers that went on to increase avian diversity on a global scale. PMID:21262814
Gómez, Eduardo J; Atun, Rifat
2013-05-10
The role of multilateral donor agencies in global health is a new area of research, with limited research on how these agencies differ in terms of their governance arrangements, especially in relation to transparency, inclusiveness, accountability, and responsiveness to civil society. We argue that historical analysis of the origins of these agencies and their coalition formation processes can help to explain these differences. We propose an analytical approach that links the theoretical literature discussing institutional origins to path dependency and institutional theory relating to proto institutions in order to illustrate the differences in coalition formation processes that shape governance within four multilateral agencies involved in global health. We find that two new multilateral donor agencies that were created by a diverse coalition of state and non-state actors, such as the Global Fund to Fight AIDS, Tuberculosis and Malaria and GAVI, what we call proto-institutions, were more adaptive in strengthening their governance processes. This contrasts with two well-established multilateral donor agencies, such as the World Bank and the Asian Development Bank, what we call Bretton Woods (BW) institutions, which were created by nation states alone; and hence, have different origins and consequently different path dependent processes.
2013-01-01
The role of multilateral donor agencies in global health is a new area of research, with limited research on how these agencies differ in terms of their governance arrangements, especially in relation to transparency, inclusiveness, accountability, and responsiveness to civil society. We argue that historical analysis of the origins of these agencies and their coalition formation processes can help to explain these differences. We propose an analytical approach that links the theoretical literature discussing institutional origins to path dependency and institutional theory relating to proto institutions in order to illustrate the differences in coalition formation processes that shape governance within four multilateral agencies involved in global health. We find that two new multilateral donor agencies that were created by a diverse coalition of state and non-state actors, such as the Global Fund to Fight AIDS, Tuberculosis and Malaria and GAVI, what we call proto-institutions, were more adaptive in strengthening their governance processes. This contrasts with two well-established multilateral donor agencies, such as the World Bank and the Asian Development Bank, what we call Bretton Woods (BW) institutions, which were created by nation states alone; and hence, have different origins and consequently different path dependent processes. PMID:23663485
Layered Double Hydroxide Minerals as Possible Prebiotic Information Storage and Transfer Compounds
NASA Astrophysics Data System (ADS)
Greenwell, H. Chris; Coveney, Peter V.
2006-02-01
One of the fundamental difficulties when considering the origin of life on Earth is the identification of an emergent system that not only replicated, but also had the capacity to undergo discrete mutation in such a way that following generations might inherit and pass on the mutation. We speculate that the layered double hydroxide (LDH) minerals are plausible candidates for a proto-RNA molecule. We describe a hypothetical LDH-like system which, when intercalated with certain anions, forms crystals with a high degree of internal order giving rise to novel information storage structures in which replication fidelity is maintained, a concept we use to propose an explanation for interstratification in terephthalate LDHs. The external surfaces of these hypothetical crystals provide active sites whose structure and chemistry is dictated by the internal information content of the LDH. Depending on the LDH polytype, the opposing external surfaces of a crystal may give rise to reactive sites that are either complementary or mirror images of each other, and so may be chiral. We also examine similarities between these proposed “proto-RNA” structures and the DNA that encodes the hereditary information in life today, concluding with a hypothetical scenario wherein these proto-RNA molecules predated the putative RNA-world.
NASA Astrophysics Data System (ADS)
Kafle, N.; Owen, L. W.; Caneses, J. F.; Biewer, T. M.; Caughman, J. B. O.; Donovan, D. C.; Goulding, R. H.; Rapp, J.
2018-05-01
The Prototype Material Plasma Exposure eXperiment (Proto-MPEX) at Oak Ridge National Laboratory is a linear plasma device that combines a helicon plasma source with additional microwave and radio frequency heating to deliver high plasma heat and particle fluxes to a target. Double Langmuir probes and Thomson scattering are being used to measure local electron temperature and density at various radial and axial locations. A recently constructed Mach-double probe provides the added capability of simultaneously measuring electron temperatures ( T e), electron densities ( n e), and Mach numbers (M). With this diagnostic, it is possible to infer the plasma flow, particle flux, and heat flux at different locations along the plasma column in Proto-MPEX. Preliminary results show Mach numbers of 0.5 (towards the dump plate) and 1.0 (towards the target plate) downstream from the helicon source, and a stagnation point (no flow) near the source for the case where the peak magnetic field was 1.3 T. Measurements of particle flow and ne and Te profiles are discussed. The extensive coverage provided by these diagnostics permits data-constrained B2.5-Eirene modeling of the entire plasma column, and comparison with results of modeling in the high-density helicon plasmas will be presented.
Updated Three-Stage Model for the Peopling of the Americas
Mulligan, Connie J.; Kitchen, Andrew; Miyamoto, Michael M.
2008-01-01
Background We re-assess support for our three stage model for the peopling of the Americas in light of a recent report that identified nine non-Native American mitochondrial genome sequences that should not have been included in our initial analysis. Removal of these sequences results in the elimination of an early (i.e. ∼40,000 years ago) expansion signal we had proposed for the proto-Amerind population. Methodology/Findings Bayesian skyline plot analysis of a new dataset of Native American mitochondrial coding genomes confirms the absence of an early expansion signal for the proto-Amerind population and allows us to reduce the variation around our estimate of the New World founder population size. In addition, genetic variants that define New World founder haplogroups are used to estimate the amount of time required between divergence of proto-Amerinds from the Asian gene pool and expansion into the New World. Conclusions/Significance The period of population isolation required for the generation of New World mitochondrial founder haplogroup-defining genetic variants makes the existence of three stages of colonization a logical conclusion. Thus, our three stage model remains an important and useful working hypothesis for researchers interested in the peopling of the Americas and the processes of colonization. PMID:18797500
DOE Office of Scientific and Technical Information (OSTI.GOV)
Adekunle, S.S.A.; Wyandt, H.; Mark, H.F.L.
1994-09-01
Recently we mapped the telomeric repeat sequences to 111 interstitial sites in the human genome and to sites of gaps and breaks induced by aphidicolin and sister chromatid exchange sites detected by BrdU. Many of these sites correspond to conserved fragile sites in man, gorilla and chimpazee, to sites of conserved sister chromatid exchange in the mammalian X chromosome, to mutagenic sensitive sites, mapped locations of proto-oncogenes, breakpoints implicated in primate evolution and to breakpoints indicated as the sole anomaly in neoplasia. This observation prompted us to investigate if the interstitial telomeric sites cluster with these sites. An extensive literaturemore » search was carried out to find all the available published sites mentioned above. For comparison, we also carried out a statistical analysis of the clustering of the sites of the telomeric repeats with the gene locations where only nucleotide mutations have been observed as the only chromosomal abnormality. Our results indicate that the telomeric repeats cluster most with fragile sites, mutagenic sensitive sites and breakpoints implicated in primate evolution and least with cancer breakpoints, mapped locations of proto-oncogenes and other genes with nucleotide mutations.« less
Fasting guidelines for diabetic children and adolescents
Azad, Kiswhar; Mohsin, Fauzia; Zargar, Abdul Hamid; Zabeen, Bedowra; Ahmad, Jamal; Raza, Syed Abbas; Tayyeb, Samin; Bajaj, Sarita; Ishtiaq, Osama; Kalra, Sanjay
2012-01-01
Fasting during the month of Ramadan, the ninth month of Islamic lunar calendar, is obligatory for all healthy adult and adolescent Muslims from the age of 12 years. Fasting starts from early dawn (Sohur/Sehri) till sunset (Iftar). During this period one has to abstain from eating and drinking. Islam has allowed many categories of people to be exempted from fasting, for example, young children, travelers, the sick, the elderly, pregnant, and lactating women. According to expert opinion, patients with type 1 diabetes (type 1 DM) who fast during Ramadan are at a very high risk to develop adverse events. However, some experienced physicians are of the opinion that fasting during Ramadan is safe for type 1 DM patients, including adolescents and older children, with good glycemic control who do regular self-monitoring and are under close professional supervision. The strategies to ensure safety of type 1 diabetic adolescents who are planning to fast include the following: Ramadan-focused medical education, pre-Ramadan medical assessment, following a healthy diet and physical activity pattern, modification in insulin regimen, and blood glucose monitoring as advised by the physician. PMID:22837907
NASA Astrophysics Data System (ADS)
Zhang, Ran; Jiang, Dabang; Ramstein, Gilles; Zhang, Zhongshi; Lippert, Peter C.; Yu, Entao
2018-02-01
Previous climate modeling studies suggest that the surface uplift of the Himalaya-Tibetan plateau (TP) is a crucial parameter for the onset and intensification of the East Asian monsoon during the Cenozoic. Most of these studies have only considered the Himalaya-TP in its present location between ∼26°N and ∼40°N despite numerous recent geophysical studies that reconstruct the Himalaya-TP 10° or more of latitude to the south during the early Paleogene. We have designed a series of climate simulations to explore the sensitivity of East Asian climate to the latitude of the Himalaya-TP. Our simulations suggest that the East Asian climate strongly depends on the latitude of the Himalaya-TP. Surface uplift of a proto-Himalaya-TP in the subtropics intensifies aridity throughout inland Asia north of ∼40°N and enhances precipitation over East Asia. In contrast, the rise of a proto-Himalaya-TP in the tropics only slightly intensifies aridity in inland Asia north of ∼40°N, and slightly increases precipitation in East Asia. Importantly, this climate sensitivity to the latitudinal position of the Himalaya-TP is non-linear, particularly for precipitation across East Asia. The simulated precipitation patterns across East Asia are significantly different between our scenarios in which a proto-plateau is situated between ∼11°N and ∼25°N and between ∼20°N and ∼33°N, but they are similar when the plateau translates northward from between ∼20°N and ∼33°N to its modern position. Our simulations, when interpreted in the context of climate proxy data from Central Asia, support geophysically-based paleogeographic reconstructions in which the southern margin of a modern-elevation proto-Himalaya-TP was located at ∼20°N or further north in the Eocene.
Banks, William E; d'Errico, Francesco; Zilhão, João
2013-01-01
The Aurignacian technocomplex comprises a succession of culturally distinct phases. Between its first two subdivisions, the Proto-Aurignacian and the Early Aurignacian, we see a shift from single to separate reduction sequences for blade and bladelet production, the appearance of split-based antler points, and a number of other changes in stone tool typology and technology as well as in symbolic material culture. Bayesian modeling of available (14)C determinations, conducted within the framework of this study, indicates that these material culture changes are coincident with abrupt and marked climatic changes. The Proto-Aurignacian occurs during an interval (ca. 41.5-39.9 k cal BP) of relative climatic amelioration, Greenland Interstadials (GI) 10 and 9, punctuated by a short cold stadial. The Early Aurignacian (ca. 39.8-37.9 k cal BP) predominantly falls within the climatic phase known as Heinrich Stadial (HS) 4, and its end overlaps with the beginning of GI 8, the former being predominantly characterized by cold and dry conditions across the European continent. We use eco-cultural niche modeling to quantitatively evaluate whether these shifts in material culture are correlated with environmental variability and, if so, whether the ecological niches exploited by human populations shifted accordingly. We employ genetic algorithm (GARP) and maximum entropy (Maxent) techniques to estimate the ecological niches exploited by humans (i.e., eco-cultural niches) during these two phases of the Aurignacian. Partial receiver operating characteristic analyses are used to evaluate niche variability between the two phases. Results indicate that the changes in material culture between the Proto-Aurignacian and the Early Aurignacian are associated with an expansion of the ecological niche. These shifts in both the eco-cultural niche and material culture are interpreted to represent an adaptive response to the relative deterioration of environmental conditions at the onset of HS4. Copyright © 2012 Elsevier Ltd. All rights reserved.
NASA Astrophysics Data System (ADS)
Arkani-Hamed, J.
2015-12-01
Growth of an inner core has conventionally been related to core cooling blow the liquidus of iron. It is however possible that the core of the proto-Earth solidifies upon pressure increase during accretion. The lithostatic pressure in the proto-Earth increases immediately after merging each impactor, and the pressure-dependent liquidus of iron may supersede the temperature near the center resulting in a solid inner core. Assuming that Earth is formed by accreting a few dozen Moon to Mars size planetary embryos, the thermal evolution of the proto-Earth's core is investigated during accretion. The collision of an embryo heats the Earth differentially and the rotating low-viscosity, differentially heated core stratifies, creating a spherically symmetric stable and radially increasing temperature distribution. Convection occurs in the outer core while heat transfers by conduction in deeper parts. It is assumed that the iron core of an embryo pools at the bottom of partially molten mantle and thermally equilibrates with surroundings. It then descends as an iron diapir in the solid silicate mantle, while releasing its gravitational energy. Depending on its temperature when arrives at the core mantle boundary, it may spread on the core creating a hot layer or plunge into the core and descend to a neutrally buoyant level while further releasing its gravitational energy. A few dozen thermal evolution models of the core are investigates to examine effects of major parameters such as: total number of impacting embryos; partitioning of the gravitational energy released during the descent of the diaper in the mantle (between the silicate mantle and the iron diaper), and in the core (between the proto-Earth's core and that of the embryo); and gravitational energy and latent heat released due to the core solidification. All of the models predict a large solid inner core, about 1500 to 2000 km in radius, at the end of accretion.
Structure and functions of water-membrane interfaces and their role in proto-biological evolution
NASA Technical Reports Server (NTRS)
Pohorille, A.; Wilson, M.; Macelroy, R. D.
1991-01-01
Among the most important developments in proto-biological evolution was the emergence of membrane-like structures. These are formed by spontaneous association of relatively simple amphiphilic molecules that would have been readily available in the primordial environment. The resulting interfacial regions between water and nonpolar interior of the membrane have several properties which made them uniquely suitable for promoting subsequent evolution. They can (1) selectively attract organic material and mediate its transport, (2) serve as simple catalysts for chemical reactions, and (3) promote the formation of trans-membrane electrical and chemical gradients which could provide energy sources for proto-cells. Understanding the structure of interfaces, their interactions with organic molecules and molecular mechanisms of their functions is an essential step to understanding proto-biological evolution. In our computer simulation studies, we showed that the structure of water at interfaces with nonpolar media is significantly different from that in the bulk. In particular, the average surface dipole density points from the vapor to the liquid. As a result, negative ions can approach the interface more easily than positive ions. Amphiphilic molecules composed of hydrocarbon conjugated rings and polar substituents (e.g., phenol) assume at the interface rigid orientations in which polar groups are buried in water while hydrocarbon parts are located in the nonpolar environment. These orientational differences are of special interest in connection with the ability of some of these molecules to efficiently absorb photons. Flexible molecules with polar substituents often adopt at interfaces conformations different from those in the bulk aquaeous solution and in the gas phase. As a result, in many instances both specificity and kinetics of chemical reactions in which these molecules can participate is modified by the presence of surfaces. Of special interest is the mechanism by which polar molecules are transferred across interface between water and a nonpolar medium. Our recent study showed that simple ionophores bind ions by the same mechanisms as ion channels and carriers from modern cells.
NASA Astrophysics Data System (ADS)
Arkani-Hamed, J.
2014-12-01
Paleointensity measurements of Archean rocks reveal a strong geodynamo at ~3.45 Ga, while excess nitrogen content of lunar soil samples implies no geodynamo at ~3.9 Ga. Here I propose that initiation of a strong geodynamo is delayed due to accretion style of Earth, involving collision and merging of a few dozen Moon to Mars size planetary embryos. Two accretion scenarios consisting of 25 and 50 embryos are investigated. The collision of an embryo heats the proto-Earth's core differentially and the rotating low-viscosity core stably stratifies, creating a spherically symmetric and radially increasing temperature distribution. Convection starts in the outer core after each impact but is destroyed by the next impact. The iron core of an impacting embryo descends in the mantle and merges to the proto-Earth's core. Both adiabatic and non-adiabatic merging cases are studied. A major part of the gravitational energy released due to core merging is used to lift up the upper portion of the core to emplace the impactor core material at the neutrally buoyant level in the proto-Earth's core. The remaining energy is converted to heat. In the adiabatic case the merging embryo's core retains all of the remaining energy, while in the non-adiabatic merging 50% of the remaining energy is shared with the outer part of the proto-Earth's core where the embryo's core descends. The two merging models result in significantly different temperature distributions in the core at the end of accretion. After the accretion, the convecting shell in the outer core grows monotonically and generates geodynamo gradually. It takes about 50-100 Myr for the convecting shell to generate a strong dipole field at the surface, 50,000 to 100,000 nT, in the presence of a large stably stratified liquid inner core when the convecting outer core thickness exceeds about one half the radius of the Earth's core.
Increased gluconeogenesis in youth with newly diagnosed type 2 diabetes
USDA-ARS?s Scientific Manuscript database
The role of increased gluconeogenesis as an important contributor to fasting hyperglycaemia at diabetes onset is not known. We evaluated the contribution of gluconeogenesis and glycogenolysis to fasting hyperglycaemia in newly diagnosed youths with type 2 diabetes following an overnight fast. Basal ...
Martel, Cécile; Pinçon, Anthony; Bélanger, Alexandre Maxime; Luo, Xiaoyan; Gillis, Marc-Antoine; de Montgolfier, Olivia; Thorin-Trescases, Nathalie; Thorin, Éric
2018-01-01
Angiopoietin-like 2 (ANGPTL2) is an inflammatory adipokine linking obesity to insulin resistance. Intermittent fasting, on the other hand, is a lifestyle intervention able to prevent obesity and diabetes but difficult to implement and maintain. Our objectives were to characterize a link between ANGPTL2 and intermittent fasting and to investigate whether the knockdown of ANGPTL2 reproduces the benefits of intermittent fasting on weight gain and insulin responsiveness in knockdown and wild-type littermates mice. Intermittent fasting, access to food ad libitum once every other day, was initiated at the age of three months and maintained for four months. Intermittent fasting decreased by 63% (p < 0.05) gene expression of angptl2 in adipose tissue of wild-type mice. As expected, intermittent fasting improved insulin sensitivity (p < 0.05) and limited weight gain (p < 0.05) in wild-type mice. Knockdown mice fed ad libitum, however, were comparable to wild-type mice following the intermittent fasting regimen: insulin sensitivity and weight gain were identical, while intermittent fasting had no additional impact on these parameters in knockdown mice. Energy intake was similar between both wild-type fed intermittent fasting and ANGPTL2 knockdown mice fed ad libitum, suggesting that intermittent fasting and knockdown of ANGPTL2 equally lower feeding efficiency. These results suggest that the reduction of ANGPTL2 could be a useful and promising strategy to prevent obesity and insulin resistance, although further investigation of the mechanisms linking ANGPTL2 and intermittent fasting is warranted. Impact statement Intermittent fasting is an efficient diet pattern to prevent weight gain and improve insulin sensitivity. It is, however, a difficult regimen to follow and compliance is expected to be very low. In this work, we demonstrate that knockdown of ANGPTL2 in mice fed ad libitum mimics the beneficial effects of intermittent fasting on weight gain and insulin sensitivity in wild-type mice. ANGPTL2 is a cytokine positively associated with fat mass in humans, which inactivation in mice improves resistance to a high-fat metabolic challenge. This study provides a novel pathway by which IF acts to limit obesity despite equivalent energy intake. The development of a pharmacological ANGPTL2 antagonist could provide an efficient tool to reduce the burden of obesity.
NASA Astrophysics Data System (ADS)
Professor Khachay, Yurie
2015-04-01
Two characteristic times are significant for evolution the interior of the homogeneous proto-planetary cloud: the time of bodies free fall towards the clouds mass center and the time of sound distribution through the cloud. With the beginning of proto-planetary disk fragmentation and accumulation of the proto-planets from the bodies and particles there are formed matter content heterogeneities of the finite dimension, heterogeneities of temperature, density and values of kinetic coefficients. The system became more and more complicated with interior interconnections. By the growing of the bodies the difference between the values of the characteristic times and dimensions become larger. The dynamical evolution of the system we could observe with use the numerical modeling of the Earth and Moon formation into the 3-D model [1,2]. The fact, that the linear dimensions of the objects during the accumulation process change from the centimeter and meter dimensions to some thousands of kilometers significantly prevent the mathematical description of these processes. The corresponding values of the no dimensional similarity criterions, which are included into the systems of differential equations, which describe the proto-planetary growing, the conditions for entropy and mass on the growing surface, the equations of the impulse balance, energy and mass into the interior parts of the planet change on an orders of values. Therefore we used very detailed space and time grids for solution the problem using the method of finite differences. The additional complications occur according to necessity to take into account the nonlinear dependence of matter viscosity from the temperature, pressure and chemical matter content. At last we took into account the principal random distribution of heterogeneities, stipulated by bodies and particles falling. Only progression towards that direction and constructing corresponding systems of observation and interpretation allow to hope receiving more and more realistic models of self organizing structures and to understand the laws of their reconstruction during the complicated process of planetary accumulation. The work is fulfilled by partly support of RFBR (grant N13-05-00138). References. 1. Y. Khachay , V. Anfilogov , and A. Antipin (2014) Numerical Results of 3-D Modeling of Moon Accumulation // Geophysical Research Abstracts, Vol. 16, EGU2014-1011 2. Y.Khachay, A.Antipin and V.Anfilogov (2014)Numerical modeling of temperature distribution on the stage of Earth's accumulation in a frame of 3-D model and peculiarities of its initial minerageny. Ural geophysical bulletin 1: 81-85.
NASA Astrophysics Data System (ADS)
Professor Khachay, Yurie
2015-04-01
Convection in the Earth's core is not only the main mechanism of heat-mass transfer, but the significant component of the MHD mechanism of geomagnetic field generation. However the research of different convection forms on the Earth's accumulation stage had been so far not produced. Regarding the convection realization into the initial core of the growing proto planet we can distinguish some qualitative different stages. The earliest from them for the area of the planets of the Earth's group had been realized in to the pre planetary bodies, when the energy dissipation by the decay of the short living radioactive, first of all 26Al, provided the melted state of the inner areas of the proto planet. By that the masses and relative velocities of body's impacts during the process of accumulation had been small. That stipulated the low temperature values of the growing proto planetary surface [1] and the background of Raleigh heat convection realization. On the next stage of the planetary accumulation the contribution of short living isotopes to the energetic process during the decay 26Al decreased, but the energy contribution from the body's impact increased. The balance of the energy on the surface of the proto planet leaded to the melted state of the upper envelope and to the inelastic character of the impact. Further during the increase of the proto planetary mass, increase of the pressure and the melting temperature with the depth and decrease of the intensity of the dissipate energy by the body's impact, which became more elastic because of the silicate part, the background of the Raleigh heat convection can be realized [2]. However the falling of accumulated bodies can lead to the random distribution of the heat anomalies, which we could research only in the frame of the 3-D model [3-4]. For researching of the MHD mechanism of geomagnetic field generation developing yet on the stage of Earth's accumulation in that paper are presented the results of numerical modeling of PT- conditions and revealed the conditions, when the random distribution of 3D thermal heterogeneities does not destroy the thermal convection into the forming outer Earth's core. Reference 1Anfilogov V.N.,Khachay Y.V.DAN (2005) ,V 403, N 6, 803-806. 2 Anfilogov V.N.,Khachay Y.V.Litosphere (2012), N6, 3-1 3.Khachay Y.V. Magnetohydrodynamics. ( 2013), 49 N 1-3, 81-86 4.Khachay Y., Antipin A.Ural'skij geofiziceskij vestnik (2014), N1,81-85
Kok, Tineke; Wolters, Henk; Bloks, Vincent W; Havinga, Rick; Jansen, Peter L M; Staels, Bart; Kuipers, Folkert
2003-01-01
Fatty acids are natural ligands of the peroxisome proliferator-activated receptor alpha (PPARalpha). Synthetic ligands of this nuclear receptor, i.e., fibrates, induce the hepatic expression of the multidrug resistance 2 gene (Mdr2), encoding the canalicular phospholipid translocator, and affect hepatobiliary lipid transport. We tested whether fasting-associated fatty acid release from adipose tissues alters hepatic transporter expression and bile formation in a PPARalpha-dependent manner. A 24-hour fasting/48-hour refeeding schedule was used in wild-type and Pparalpha((-/-)) mice. Expression of genes involved in the control of bile formation was determined and related to secretion rates of biliary components. Expression of Pparalpha, farnesoid X receptor, and liver X receptor alpha genes encoding nuclear receptors that control hepatic bile salt and sterol metabolism was induced on fasting in wild-type mice only. The expression of Mdr2 was 5-fold increased in fasted wild-type mice and increased only marginally in Pparalpha((-/-)) mice, and it normalized on refeeding. Mdr2 protein levels and maximal biliary phospholipid secretion rates were clearly increased in fasted wild-type mice. Hepatic expression of the liver X receptor target genes ATP binding cassette transporter a1 (Abca1), Abcg5, and Abcg8, implicated in hepatobiliary cholesterol transport, was induced in fasted wild-type mice only. However, the maximal biliary cholesterol secretion rate was reduced by approximately 50%. Induction of Mdr2 expression and function is part of the PPARalpha-mediated fasting response in mice. Fasting also induces expression of the putative hepatobiliary cholesterol transport genes Abca1, Abcg5, and Abcg8, but, nonetheless, maximal biliary cholesterol excretion is decreased after fasting.
NASA Astrophysics Data System (ADS)
Campana, R.; Fuschino, F.; Labanti, C.; Marisaldi, M.; Amati, L.; Fiorini, M.; Uslenghi, M.; Baldazzi, G.; Bellutti, P.; Evangelista, Y.; Elmi, I.; Feroci, M.; Ficorella, F.; Frontera, F.; Picciotto, A.; Piemonte, C.; Rachevski, A.; Rashevskaya, I.; Rignanese, L. P.; Vacchi, A.; Zampa, G.; Zampa, N.; Zorzi, N.
2016-07-01
A future compact and modular X and gamma-ray spectrometer (XGS) has been designed and a series of proto- types have been developed and tested. The experiment envisages the use of CsI scintillator bars read out at both ends by single-cell 25 mm2 Silicon Drift Detectors. Digital algorithms are used to discriminate between events absorbed in the Silicon layer (lower energy X rays) and events absorbed in the scintillator crystal (higher energy X rays and -rays). The prototype characterization is shown and the modular design for future experiments with possible astrophysical applications (e.g. for the THESEUS mission proposed for the ESA M5 call) are discussed.
Probe-pin device for optical neurotransmitter sensing in the brain
NASA Astrophysics Data System (ADS)
Kim, Min Hyuck; Song, Kyo D.; Yoon, Hargsoon; Park, Yeonjoon; Choi, Sang H.; Lee, Dae-Sung; Shin, Kyu-Sik; Hwang, Hak-In; Lee, Uhn
2015-04-01
Development of an optical neurotransmitter sensing device using nano-plasmonic probes and a micro-spectrometer for real time monitoring of neural signals in the brain is underway. Clinical application of this device technology is to provide autonomous closed-loop feedback control to a deep brain stimulation (DBS) system and enhance the accuracy and efficacy of DBS treatment. By far, we have developed an implantable probe-pin device based on localized field enhancement of surface plasmonic resonance on a nanostructured sensing domain which can amplify neurochemical signals from evoked neural activity in the brain. In this paper, we will introduce the details of design and sensing performance of a proto-typed microspectrometer and nanostructured probing devices for real time measurement of neurotransmitter concentrations.
Matsuba, Ikuro; Saito, Kazumi; Takai, Masahiko; Hirao, Koichi; Sone, Hirohito
2012-09-01
To investigate the relationship between fasting insulin levels and metabolic risk factors (MRFs) in type 2 diabetic patients at the first clinic/hospital visit in Japan over the years 2000 to 2009. In total, 4,798 drug-naive Japanese patients with type 2 diabetes were registered on their first clinic/hospital visits. Conventional clinical factors and fasting insulin levels were observed at baseline within the Japan Diabetes Clinical Data Management (JDDM) study between consecutive 2-year groups. Multiple linear regression analysis was performed using a model in which the dependent variable was fasting insulin values using various clinical explanatory variables. Fasting insulin levels were found to be decreasing from 2000 to 2009. Multiple linear regression analysis with the fasting insulin levels as the dependent variable showed that waist circumference (WC), BMI, mean blood pressure, triglycerides, and HDL cholesterol were significant, with WC and BMI as the main factors. ANCOVA after adjustment for age and fasting plasma glucose clearly shows the decreasing trend in fasting insulin levels and the increasing trend in BMI. During the 10-year observation period, the decreasing trend in fasting insulin was related to the slight increase in WC/BMI in type 2 diabetes. Low pancreatic β-cell reserve on top of a lifestyle background might be dependent on an increase in MRFs.
Matsuba, Ikuro; Saito, Kazumi; Takai, Masahiko; Hirao, Koichi; Sone, Hirohito
2012-01-01
OBJECTIVE To investigate the relationship between fasting insulin levels and metabolic risk factors (MRFs) in type 2 diabetic patients at the first clinic/hospital visit in Japan over the years 2000 to 2009. RESEARCH DESIGN AND METHODS In total, 4,798 drug-naive Japanese patients with type 2 diabetes were registered on their first clinic/hospital visits. Conventional clinical factors and fasting insulin levels were observed at baseline within the Japan Diabetes Clinical Data Management (JDDM) study between consecutive 2-year groups. Multiple linear regression analysis was performed using a model in which the dependent variable was fasting insulin values using various clinical explanatory variables. RESULTS Fasting insulin levels were found to be decreasing from 2000 to 2009. Multiple linear regression analysis with the fasting insulin levels as the dependent variable showed that waist circumference (WC), BMI, mean blood pressure, triglycerides, and HDL cholesterol were significant, with WC and BMI as the main factors. ANCOVA after adjustment for age and fasting plasma glucose clearly shows the decreasing trend in fasting insulin levels and the increasing trend in BMI. CONCLUSIONS During the 10-year observation period, the decreasing trend in fasting insulin was related to the slight increase in WC/BMI in type 2 diabetes. Low pancreatic β-cell reserve on top of a lifestyle background might be dependent on an increase in MRFs. PMID:22665215
Design of a digital holography system for PFC erosion measurements on Proto-MPEX
DOE Office of Scientific and Technical Information (OSTI.GOV)
ThomasJr., C. E.; Biewer, Theodore M; Baylor, Larry R
2016-01-01
A project has been started at ORNL to develop a dual-wavelength digital holography system for plasma facing component (PFC) erosion measurements on Proto-MPEX. Such a system will allow in-situ real-time measurements of component erosion. Initially the system will be developed with one laser, and first experimental laboratory measurements will be made with the single laser system. In the second year of development a second CO2 laser will be added and measurements with the dual wavelength system will begin. Adding the second wavelength allows measurements at a much longer synthetic wavelength equal to the average of the two wavelengths times themore » average divided by the difference of the two wavelengths.« less
Spotl, S.; Wright, V.P.
1992-01-01
The majority of the dolomite consists of a finely crystalline groundmass of dolomicrospar and, less commonly, dolomicrite. Glaebules, irregular spar-filled cracks, spheroidal dolomite, silificiation and vuggy porosity are locally abundant in the massive dolomite. In contrast, biologically induced micromorphological features such as rhizocretions and alveolar-septal fabrics were observed in the thin, nodular dolomite beds. Petrographic observations argue in favour of primary (proto)dolomite precipitation, although early diagenetic replacement of calcite by (proto)dolomite cannot be ruled out. Strontium and carbon isotope data of early diagenetic dolocrete cements and oxygen isotope data of early diagenetic silica indicate an entirely non-marine, continental origin for the groundwaters. -from Authors
A model of the biogeographical journey from Proto-pan to Pan paniscus.
Myers Thompson, Jo A
2003-04-01
Pan paniscus is unique in the group of African apes because of its range south of the Congo River. Examination of the bio-geographical journey of the genus Pan to the species P. paniscus is important when discussing the evolution of African apes. This paper is a review of the paleo-geographic events, the zoogeography, and faunal sorting which influenced P. paniscus divergence from the Proto-pan ancestor within the recent Miocene through Pliocene Epochs, approximately 10-2 MYA. Finally, by elucidating modern day evidence of food plant forms in the southern periphery exploited by P. paniscus in the forest/savanna mosaic habitat, we are able to conclude with those extrinsic events that most influenced the occurrence and distribution of P. paniscus.
A comparison of rat myosin from fast and slow skeletal muscle and the effect of disuse
NASA Technical Reports Server (NTRS)
Unsworth, B. R.; Witzmann, F. A.; Fitts, R. H.
1981-01-01
Certain enzymatic and structural features of myosin, purified from rat skeletal muscles representative of the fast twitch glycolytic (type IIb), the fast twitch oxidative (type IIa), and the slow twitch oxidative (type I) fiber, were determined and the results were compared with the measured contractile properties. Good correlation was found between the shortening velocities and Ca(2+)-activated ATPase activity for each fiber type. Short term hind limb immobilization caused prolongation of contraction time and one-half relaxation time in the fast twitch muscles and a reduction of these contractile properties in slow twitch soleus. Furthermore, the increased maximum shortening velocity in the immobilized soleus could be correlated with increased Ca(2+)-ATPase, but no change was observed in the enzymatic activity of the fast twitch muscles. No alteration in light chain distribution with disuse was observed in any of the fiber types. The myosin from slow twitch soleus could be distinguished from fast twitch myosins on the basis of the pattern of peptides generated by proteolysis of the heavy chains. Six weeks of hind limb immobilization resulted in both an increased ATPase activity and an altered heavy chain primary structure in the slow twitch soleus muscle.
Survey on diabetic patients treated with insulin during the fasting month of Ramadan
Abid, Mohamed; Hsairi, Mohamed; Elleuch, Mouna; Ben Aissa, Emna
2018-01-01
Aim To estimate the proportion of diabetic patients on insulin, who interrupt fasting during Ramadan, and describe the reported reasons of this interruption. Design This is a national observational survey of diabetic patients treated with insulin and fasting during the month of Ramadan 2013, proposed to all endocrinologists willing to participate. Consecutive patients were included until the required sample size, estimated at 498 patients, was obtained. Conducted among patients recruited by endocrinologists during the month following Ramadan 2013. Results Five hundred twenty-six (526) patients were included, of which 51 (9.7%) had type 1 diabetes. The mean age was 36.8 ± 11.6 and 58.3 ± 10.0 years for type 1 and type 2 diabetes, respectively. The proportions of male subjects were 62.8% and 57.5% for type 1 and type 2 diabetes, respectively. The mean duration of diabetes was 11.0 ± 8.8 and 14.4 ± 7.9 years for type 1 and type 2 diabetes, respectively. During Ramadan, more than 55% (54.9% and 55.8% for type 1 and type 2 diabetes, respectively) of patients were treated with insulin analog and over a third with mixed insulin. In this study population, 71.5% reported having fasted without interruption during the month of Ramadan. The average number of non-fasted days was 3.0 ± 6.7, mainly due to hypoglycemic episodes. Conclusion According to this observational survey conducted in Tunisia, most patients with diabetes treated with insulin (insulin in more than half of the cases) were able to fast without interruption during Ramadan. PMID:29416371
Physiological changes in fast and slow muscle with simulated weightlessness
NASA Technical Reports Server (NTRS)
Dettbarn, W. D.; Misulis, K. E.
1984-01-01
A rat hindlimb suspension model of simulated weightlessness was used to examine the physiological characteristics of skeletal muscle. The physiological sequelae of hindlimb suspension were compared to those of spinal cord section, denervation by sciatic nerve crush, and control. Muscle examined were the predominantly slow (Type 1) soleus (SOL) and the predominantly fast (Type 2) extensor digitorum longus (EDL). Two procedures which alter motor unit activity, hindlimb suspension and spinal cord section, produce changes in characteristics of skeletal muscles that are dependent upon fiber type. The SOL develops characteristics more representative of a fast muscle, including smaller Type 1 fiber proportion and higher AChE activity. The EDL, which is already predominantly fast, loses most of its few Type 1 fibers, thus also becoming faster. These data are in agreement with the studies in which rats experienced actual weightlessness.
AlHasan, Dana M; Eberth, Jan Marie
2016-01-05
Studies suggest that the built environment with high numbers of fast food restaurants and convenience stores and low numbers of super stores and grocery stores are related to obesity, type II diabetes mellitus, and other chronic diseases. Since few studies assess these relationships at the county level, we aim to examine fast food restaurant density, convenience store density, super store density, and grocery store density and prevalence of type II diabetes among counties in South Carolina. Pearson's correlation between four types of food outlet densities- fast food restaurants, convenience stores, super stores, and grocery stores- and prevalence of type II diabetes were computed. The relationship between each of these food outlet densities were mapped with prevalence of type II diabetes, and OLS regression analysis was completed adjusting for county-level rates of obesity, physical inactivity, density of recreation facilities, unemployment, households with no car and limited access to stores, education, and race. We showed a significant, negative relationship between fast food restaurant density and prevalence of type II diabetes, and a significant, positive relationship between convenience store density and prevalence of type II diabetes. In adjusted analysis, the food outlet densities (of any type) was not associated with prevalence of type II diabetes. This ecological analysis showed no associations between fast food restaurants, convenience stores, super stores, or grocery stores densities and the prevalence of type II diabetes. Consideration of environmental, social, and cultural determinants, as well as individual behaviors is needed in future research.
The formation of protostellar binaries in primordial minihalos
NASA Astrophysics Data System (ADS)
Riaz, R.; Bovino, S.; Vanaverbeke, S.; Schleicher, D. R. G.
2018-06-01
The first stars are known to form in primordial gas, either in minihalos with about 106 M⊙ or so-called atomic cooling halos of about 108 M⊙. Simulations have shown that gravitational collapse and disk formation in primordial gas yield dense stellar clusters. In this paper, we focus particularly on the formation of protostellar binary systems, and aim to quantify their properties during the early stage of their evolution. For this purpose, we combine the smoothed particle hydrodynamics code GRADSPH with the astrochemistry package KROME. The GRADSPH-KROME framework is employed to investigate the collapse of primordial clouds in the high-density regime, exploring the fragmentation process and the formation of binary systems. We observe a strong dependence of fragmentation on the strength of the turbulent Mach number M and the rotational support parameter β. Rotating clouds show significant fragmentation, and have produced several Pop. III proto-binary systems. We report maximum and minimum mass accretion rates of 2.31 × 10-1 M⊙ yr-1 and 2.18 × 10-4 M⊙ yr-1. The mass spectrum of the individual Pop III proto-binary components ranges from 0.88 M⊙ to 31.96 M⊙ and has a sensitive dependence on the Mach number M as well as on the rotational parameter β. We also report a range from ˜0.01 to ˜1 for the mass ratio of our proto-binary systems.
Kim, Ji-hoon; Ma, Xiangcheng; Grudić, Michael Y.; ...
2017-11-23
Using a state-of-the-art cosmological simulation of merging proto-galaxies at high redshift from the FIRE project, with explicit treatments of star formation and stellar feedback in the interstellar medium, we investigate the formation of star clusters and examine one of the formation hypotheses of present-day metal-poor globular clusters. Here, we find that frequent mergers in high-redshift proto-galaxies could provide a fertile environment to produce long-lasting bound star clusters. The violent merger event disturbs the gravitational potential and pushes a large gas mass of ≳ 10 5–6 M ⊙ collectively to high density, at which point it rapidly turns into stars beforemore » stellar feedback can stop star formation. The high dynamic range of the reported simulation is critical in realizing such dense star-forming clouds with a small dynamical time-scale, tff ≲ 3 Myr, shorter than most stellar feedback time-scales. Our simulation then allows us to trace how clusters could become virialized and tightly bound to survive for up to ~420 Myr till the end of the simulation. Finally, because the cluster's tightly bound core was formed in one short burst, and the nearby older stars originally grouped with the cluster tend to be preferentially removed, at the end of the simulation the cluster has a small age spread.« less
Taylor, C; Duffy, L K; Plumley, F G; Bowyer, R T
2000-09-01
A spectrofluorometric method (B. Grandchamp et al., 1980, Biochem. Biophys. Acta 629, 577-586) developed for the determination of amounts of uroporphyrin I (Uro I), coproporphyrin III (Copro III), and protoporphyrin IX (Proto IX) in skin fibroblasts was compared with a high-performance liquid chromatography (HPLC) method for the analysis of porphyrins in fecal samples of river otters (Lutra canadensis). Heptacarboxylate porphyrin I and coproporphyrin I, two porphyrins determined to be critical in defining the porphyrin profile in fecal samples of river otters with the HPLC method, contributed substantially to the calculation of the concentrations of Uro I and Copro III, respectively, in standard solutions of porphyrins with the spectrofluorometric method. Fluorescent components of the fecal matrix complicated the determination of the concentrations of Uro I, Copro III, and Proto IX with the spectrofluorometric method and resulted in erroneous values for the concentrations of these porphyrins compared with values determined with the HPLC method. These results indicate that the complexity of the sample, particularly with regard to the potential presence of interfering fluorescent compounds, as well as porphyrins additional to Uro I, Copro III, and Proto IX, should be considered prior to the application of the spectrofluorometric method. An alternative HPLC method developed for the rapid characterization of porphyrin profiles in fecal samples of river otters is described. Copyright 2000 Academic Press.
Magnetic reconnection as a chondrule heating mechanism
NASA Astrophysics Data System (ADS)
Lazerson, Samuel A.
2010-12-01
The origin of chondrules (sub-millimeter inclusions found in stony meteorites) remains today an open question despite over century of examination. The age of these proto-solar relics shows a well defined cutoff of around 4.5 billion years ago. This places them as the oldest solids in the solar system. Chemical examination indicates that they experienced heating events on the order of 5000 K/hr for periods of around 30 minutes, followed by extending periods of cooling. Additional examination indicates the presence of large magnetic fields during their formation. Most attempts to explain chondrule formation in the proto-solar nebula neglect the existence of a plasma environment, with even less mention of dust being a charge carrier (dusty plasma). Simulations of magnetic reconnection in a dusty plasma are forwarded as a mechanism for chondrule formation in the proto-solar nebula. Here large dust-neutral relative velocities are found in the reconnection region. These flows are associated with the dynamics of reconnection. The high Knudsen number of the dust particles allows for a direct calculation of frictional heating due to collisions with neutrals (allowing for the neglect of boundary layer formation around the particle). Test particle simulations produce heating equivalent to that recorded in the chondrule mineral record. It is shown that magnetic reconnection in a dusty plasma is of fundamental importance to the formation of the most primitive solids in the solar system.
Functional Information: Towards Synthesis of Biosemiotics and Cybernetics
Sharov, Alexei A.
2012-01-01
Biosemiotics and cybernetics are closely related, yet they are separated by the boundary between life and non-life: biosemiotics is focused on living organisms, whereas cybernetics is applied mostly to non-living artificial devices. However, both classes of systems are agents that perform functions necessary for reaching their goals. I propose to shift the focus of biosemiotics from living organisms to agents in general, which all belong to a pragmasphere or functional universe. Agents should be considered in the context of their hierarchy and origin because their semiosis can be inherited or induced by higher-level agents. To preserve and disseminate their functions, agents use functional information - a set of signs that encode and control their functions. It includes stable memory signs, transient messengers, and natural signs. The origin and evolution of functional information is discussed in terms of transitions between vegetative, animal, and social levels of semiosis, defined by Kull. Vegetative semiosis differs substantially from higher levels of semiosis, because signs are recognized and interpreted via direct code-based matching and are not associated with ideal representations of objects. Thus, I consider a separate classification of signs at the vegetative level that includes proto-icons, proto-indexes, and proto-symbols. Animal and social semiosis are based on classification, and modeling of objects, which represent the knowledge of agents about their body (Innenwelt) and environment (Umwelt). PMID:22368439
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kim, Ji-hoon; Ma, Xiangcheng; Grudić, Michael Y.
Using a state-of-the-art cosmological simulation of merging proto-galaxies at high redshift from the FIRE project, with explicit treatments of star formation and stellar feedback in the interstellar medium, we investigate the formation of star clusters and examine one of the formation hypotheses of present-day metal-poor globular clusters. Here, we find that frequent mergers in high-redshift proto-galaxies could provide a fertile environment to produce long-lasting bound star clusters. The violent merger event disturbs the gravitational potential and pushes a large gas mass of ≳ 10 5–6 M ⊙ collectively to high density, at which point it rapidly turns into stars beforemore » stellar feedback can stop star formation. The high dynamic range of the reported simulation is critical in realizing such dense star-forming clouds with a small dynamical time-scale, tff ≲ 3 Myr, shorter than most stellar feedback time-scales. Our simulation then allows us to trace how clusters could become virialized and tightly bound to survive for up to ~420 Myr till the end of the simulation. Finally, because the cluster's tightly bound core was formed in one short burst, and the nearby older stars originally grouped with the cluster tend to be preferentially removed, at the end of the simulation the cluster has a small age spread.« less
Unravelling the Genetic History of Negritos and Indigenous Populations of Southeast Asia
Aghakhanian, Farhang; Yunus, Yushima; Naidu, Rakesh; Jinam, Timothy; Manica, Andrea; Hoh, Boon Peng; Phipps, Maude E.
2015-01-01
Indigenous populations of Malaysia known as Orang Asli (OA) show huge morphological, anthropological, and linguistic diversity. However, the genetic history of these populations remained obscure. We performed a high-density array genotyping using over 2 million single nucleotide polymorphisms in three major groups of Negrito, Senoi, and Proto-Malay. Structural analyses indicated that although all OA groups are genetically closest to East Asian (EA) populations, they are substantially distinct. We identified a genetic affinity between Andamanese and Malaysian Negritos which may suggest an ancient link between these two groups. We also showed that Senoi and Proto-Malay may be admixtures between Negrito and EA populations. Formal admixture tests provided evidence of gene flow between Austro-Asiatic-speaking OAs and populations from Southeast Asia (SEA) and South China which suggest a widespread presence of these people in SEA before Austronesian expansion. Elevated linkage disequilibrium (LD) and enriched homozygosity found in OAs reflect isolation and bottlenecks experienced. Estimates based on Ne and LD indicated that these populations diverged from East Asians during the late Pleistocene (14.5 to 8 KYA). The continuum in divergence time from Negritos to Senoi and Proto-Malay in combination with ancestral markers provides evidences of multiple waves of migration into SEA starting with the first Out-of-Africa dispersals followed by Early Train and subsequent Austronesian expansions. PMID:25877615
DOE Office of Scientific and Technical Information (OSTI.GOV)
Banfield, Jillian; Breitbart, Mya; VerBerkmoes, Nathan
CRISPRs (clustered regularly interspaced short palindromic repeats) are adaptive immune systems in Bacteria and Archaea. Transcripts of the spacers that separate the repeats confer immunity through sequence identity with a targeted region (proto-spacer) in phage/viral, plasmid, or other foreign DNA. Short sequences immediately flanking the proto-spacer (proto-spacer adjacent motifs—PAMs) are important in both procuring spacers from and providing immunity to targeted sequences. New spacers are incorporated unidirectionally at the leader end of the CRISPR loci, thus recording a timeline of recent viral exposure. In the early phase of our research, we documented extremely rapid diversification of the CRISPR loci inmore » natural populations [Tyson and Banfield, 2008] matched by high levels of sequence variation in natural viral populations [Andersson and Banfield, 2008]. Since then, in a genetically tractable model laboratory system, we have 1) tracked phage mutation and CRISPR diversification, and in a natural model system, we have 2) examined population history via over time, 3) investigated the timescale over which spacers become ineffective and the process by which ineffective spacers are removed, and 4) analyzed viral diversity. In addition to research activities, our group has organized five international CRISPR meetings, the fifth to be held at University of California, Berkeley in June 2012. Most importantly, the project provided the majority of funding support for Christine Sun (Ph.D. 2012).« less
Salas-Gismondi, Rodolfo; Flynn, John J.; Baby, Patrice; Tejada-Lara, Julia V.; Claude, Julien; Antoine, Pierre-Olivier
2016-01-01
Gavialoid crocodylians are the archetypal longirostrine archosaurs and, as such, understanding their patterns of evolution is fundamental to recognizing cranial rearrangements and reconstructing adaptive pathways associated with elongation of the rostrum (longirostry). The living Indian gharial Gavialis gangeticus is the sole survivor of the group, thus providing unique evidence on the distinctive biology of its fossil kin. Yet phylogenetic relationships and evolutionary ecology spanning ~70 million-years of longirostrine crocodylian diversification remain unclear. Analysis of cranial anatomy of a new proto-Amazonian gavialoid, Gryposuchus pachakamue sp. nov., from the Miocene lakes and swamps of the Pebas Mega-Wetland System reveals that acquisition of both widely separated and protruding eyes (telescoped orbits) and riverine ecology within South American and Indian gavialoids is the result of parallel evolution. Phylogenetic and morphometric analyses show that, in association with longirostry, circumorbital bone configuration can evolve rapidly for coping with trends in environmental conditions and may reflect shifts in feeding strategy. Our results support a long-term radiation of the South American forms, with taxa occupying either extreme of the gavialoid morphospace showing preferences for coastal marine versus fluvial environments. The early biogeographic history of South American gavialoids was strongly linked to the northward drainage system connecting proto-Amazonian wetlands to the Caribbean region. PMID:27097031
NASA Astrophysics Data System (ADS)
Kim, Ji-hoon; Ma, Xiangcheng; Grudić, Michael Y.; Hopkins, Philip F.; Hayward, Christopher C.; Wetzel, Andrew; Faucher-Giguère, Claude-André; Kereš, Dušan; Garrison-Kimmel, Shea; Murray, Norman
2018-03-01
Using a state-of-the-art cosmological simulation of merging proto-galaxies at high redshift from the FIRE project, with explicit treatments of star formation and stellar feedback in the interstellar medium, we investigate the formation of star clusters and examine one of the formation hypotheses of present-day metal-poor globular clusters. We find that frequent mergers in high-redshift proto-galaxies could provide a fertile environment to produce long-lasting bound star clusters. The violent merger event disturbs the gravitational potential and pushes a large gas mass of ≳ 105-6 M⊙ collectively to high density, at which point it rapidly turns into stars before stellar feedback can stop star formation. The high dynamic range of the reported simulation is critical in realizing such dense star-forming clouds with a small dynamical time-scale, tff ≲ 3 Myr, shorter than most stellar feedback time-scales. Our simulation then allows us to trace how clusters could become virialized and tightly bound to survive for up to ˜420 Myr till the end of the simulation. Because the cluster's tightly bound core was formed in one short burst, and the nearby older stars originally grouped with the cluster tend to be preferentially removed, at the end of the simulation the cluster has a small age spread.
Ryu, Byoung Y.; Evans-Galea, Marguerite V.; Gray, John T.; Bodine, David M.; Persons, Derek A.
2008-01-01
Pathogenic activation of the LMO2 proto-oncogene by an oncoretroviral vector insertion in a clinical trial for X-linked severe combined immunodeficiency (X-SCID) has prompted safety concerns. We used an adeno-associated virus vector to achieve targeted insertion of a γ-retroviral long terminal repeat (LTR) driving a GFP expression cassette with flanking loxP sites in a human T-cell line at the precise location of vector integration in one of the patients with X-SCID. The LTR-GFP cassette was inserted into the first intron of the LMO2 gene, resulting in strong activation of LMO2. Cre-mediated cassette exchange was used to replace the original LTR-GFP cassette with one flanked by insulator elements leading to a several fold reduction in LMO2 expression. The LTR-GFP cassette was also replaced with a globin gene regulatory cassette that failed to activate the LMO2 gene in lymphoid cells. A γ-retroviral vector with 2 intact LTRs resulted in activation of the LMO2 gene when inserted into the first intron, but a self-inactivating lentiviral vector with an internal cellular promoter and flanking insulator elements did not activate the LMO2 gene. Thus, this system is useful for comparing the safety profiles of vector cassettes with various regulatory elements for their potential for proto-oncogene activation. PMID:17991809
Functional Information: Towards Synthesis of Biosemiotics and Cybernetics.
Sharov, Alexei A
2010-04-27
Biosemiotics and cybernetics are closely related, yet they are separated by the boundary between life and non-life: biosemiotics is focused on living organisms, whereas cybernetics is applied mostly to non-living artificial devices. However, both classes of systems are agents that perform functions necessary for reaching their goals. I propose to shift the focus of biosemiotics from living organisms to agents in general, which all belong to a pragmasphere or functional universe. Agents should be considered in the context of their hierarchy and origin because their semiosis can be inherited or induced by higher-level agents. To preserve and disseminate their functions, agents use functional information - a set of signs that encode and control their functions. It includes stable memory signs, transient messengers, and natural signs. The origin and evolution of functional information is discussed in terms of transitions between vegetative, animal, and social levels of semiosis, defined by Kull. Vegetative semiosis differs substantially from higher levels of semiosis, because signs are recognized and interpreted via direct code-based matching and are not associated with ideal representations of objects. Thus, I consider a separate classification of signs at the vegetative level that includes proto-icons, proto-indexes, and proto-symbols. Animal and social semiosis are based on classification, and modeling of objects, which represent the knowledge of agents about their body (Innenwelt) and environment (Umwelt).
Towards the other mythology--the offspring of darkness: Jocasta's daughters and granddaughters.
Lozica, Ivan
2008-12-01
"It all started with the doubt (perhaps exaggerated) that the Gods do not know how to talk". The author presents the situation and tendencies in contemporary mythological research. The article starts out from the mythos-logos antithesis and from the twofold conception of the myth as both a fabricated and a sacred story. The allopersonages as characters of different names, who function as markers for the identical element in the structure, are contrasted by the author with the isopersonages bearing names of the same characters, who simultaneously function as markers for diverse elements or semantic strata in the structure. The term sociogony is introduced in analogy to the terms theogony and cosmogony. On the basis of a review of Croatian and mainstream mythological trends, the author perceives two main orientations in mythological research: the historical reconstruction of the Proto-Slavic myth, and research into the myth, mythic consciousness and mythic language in contemporary everyday life. The author supports the idea of differentiating mythology and religion and analyses the role of the myth, and scholarship on the myth, in forming national and cultural identity. From that aspect, we can also identify the contemporary transitional scholarly myth in today's reconstructions of the unifed Proto-Slavic myth. Remythologisation is part of retraditionalisation: Proto-Slavic fellowship is the spiritual solace by which the East responds to the tearing down of the Berlin Wall.
Salas-Gismondi, Rodolfo; Flynn, John J; Baby, Patrice; Tejada-Lara, Julia V; Claude, Julien; Antoine, Pierre-Olivier
2016-01-01
Gavialoid crocodylians are the archetypal longirostrine archosaurs and, as such, understanding their patterns of evolution is fundamental to recognizing cranial rearrangements and reconstructing adaptive pathways associated with elongation of the rostrum (longirostry). The living Indian gharial Gavialis gangeticus is the sole survivor of the group, thus providing unique evidence on the distinctive biology of its fossil kin. Yet phylogenetic relationships and evolutionary ecology spanning ~70 million-years of longirostrine crocodylian diversification remain unclear. Analysis of cranial anatomy of a new proto-Amazonian gavialoid, Gryposuchus pachakamue sp. nov., from the Miocene lakes and swamps of the Pebas Mega-Wetland System reveals that acquisition of both widely separated and protruding eyes (telescoped orbits) and riverine ecology within South American and Indian gavialoids is the result of parallel evolution. Phylogenetic and morphometric analyses show that, in association with longirostry, circumorbital bone configuration can evolve rapidly for coping with trends in environmental conditions and may reflect shifts in feeding strategy. Our results support a long-term radiation of the South American forms, with taxa occupying either extreme of the gavialoid morphospace showing preferences for coastal marine versus fluvial environments. The early biogeographic history of South American gavialoids was strongly linked to the northward drainage system connecting proto-Amazonian wetlands to the Caribbean region.
The Origin of Cultivation and Proto-Weeds, Long Before Neolithic Farming.
Snir, Ainit; Nadel, Dani; Groman-Yaroslavski, Iris; Melamed, Yoel; Sternberg, Marcelo; Bar-Yosef, Ofer; Weiss, Ehud
2015-01-01
Weeds are currently present in a wide range of ecosystems worldwide. Although the beginning of their evolution is largely unknown, researchers assumed that they developed in tandem with cultivation since the appearance of agricultural habitats some 12,000 years ago. These rapidly-evolving plants invaded the human disturbed areas and thrived in the new habitat. Here we present unprecedented new findings of the presence of "proto-weeds" and small-scale trial cultivation in Ohalo II, a 23,000-year-old hunter-gatherers' sedentary camp on the shore of the Sea of Galilee, Israel. We examined the plant remains retrieved from the site (ca. 150,000 specimens), placing particular emphasis on the search for evidence of plant cultivation by Ohalo II people and the presence of weed species. The archaeobotanically-rich plant assemblage demonstrates extensive human gathering of over 140 plant species and food preparation by grinding wild wheat and barley. Among these, we identified 13 well-known current weeds mixed with numerous seeds of wild emmer, barley, and oat. This collection provides the earliest evidence of a human-disturbed environment-at least 11 millennia before the onset of agriculture-that provided the conditions for the development of "proto-weeds", a prerequisite for weed evolution. Finally, we suggest that their presence indicates the earliest, small-scale attempt to cultivate wild cereals seen in the archaeological record.
The Origin of Cultivation and Proto-Weeds, Long Before Neolithic Farming
Snir, Ainit; Nadel, Dani; Groman-Yaroslavski, Iris; Melamed, Yoel; Sternberg, Marcelo; Bar-Yosef, Ofer; Weiss, Ehud
2015-01-01
Weeds are currently present in a wide range of ecosystems worldwide. Although the beginning of their evolution is largely unknown, researchers assumed that they developed in tandem with cultivation since the appearance of agricultural habitats some 12,000 years ago. These rapidly-evolving plants invaded the human disturbed areas and thrived in the new habitat. Here we present unprecedented new findings of the presence of “proto-weeds” and small-scale trial cultivation in Ohalo II, a 23,000-year-old hunter-gatherers' sedentary camp on the shore of the Sea of Galilee, Israel. We examined the plant remains retrieved from the site (ca. 150,000 specimens), placing particular emphasis on the search for evidence of plant cultivation by Ohalo II people and the presence of weed species. The archaeobotanically-rich plant assemblage demonstrates extensive human gathering of over 140 plant species and food preparation by grinding wild wheat and barley. Among these, we identified 13 well-known current weeds mixed with numerous seeds of wild emmer, barley, and oat. This collection provides the earliest evidence of a human-disturbed environment—at least 11 millennia before the onset of agriculture—that provided the conditions for the development of "proto-weeds", a prerequisite for weed evolution. Finally, we suggest that their presence indicates the earliest, small-scale attempt to cultivate wild cereals seen in the archaeological record. PMID:26200895
Andruchov, Oleg; Galler, Stefan
2008-03-01
This study contributes to understand the physiological role of slow myosin light chain isoforms in fast-twitch type IIA fibres of skeletal muscle. These isoforms are often attached to the myosin necks of rat type IIA fibres, whereby the slow alkali myosin light chain isoform MLC1s is much more frequent and abundant than the slow regulatory myosin light chain isoform MLC2s. In the present study, single-skinned rat type IIA fibres were maximally Ca(2+) activated and subjected to stepwise stretches for causing a perturbation of myosin head pulling cycles. From the time course of the resulting force transients, myosin head kinetics was deduced. Fibres containing MLC1s exhibited slower kinetics independently of the presence or absence of MLC2s. At the maximal MLC1s concentration of about 75%, the slowing was about 40%. The slowing effect of MLC1s is possibly due to differences in the myosin heavy chain binding sites of the fast and slow alkali MLC isoforms, which changes the rigidity of the myosin neck. Compared with the impact of myosin heavy chain isoforms in various fast-twitch fibre types, the influence of MLC1s on myosin head kinetics of type IIA fibres is much smaller. In conclusion, the physiological role of fast and slow MLC isoforms in type IIA fibres is a fine-tuning of the myosin head kinetics.
Muscle mechanics: adaptations with exercise-training.
Fitts, R H; Widrick, J J
1996-01-01
Based on the MHC isoform pattern, adult mammalian limb skeletal muscles contain two and, in some species, three types of fast fibers (Type IIa, IIx, and IIb), and one slow fiber (Type I). Slow muscles, such as the soleus, contain primarily the slow Type I fiber, whereas fast-twitch muscles are composed primarily of a mixture of the fast myosin isozymes. Force generation involves cross-bridge interaction and transition from a weakly bound, low-force state (AM-ADP-P(i)) to the strongly bound, high-force state (AM-ADP). This transition is thought to be rate limiting in terms of dP/dt, and the high-force state is the dominant cross-bridge form during a peak isometric contraction. Intact fast and slow skeletal muscles generate approximately the same amount of peak force (Po) of between 200 and 250 kN.m-2. However, the rate of transition from the low- to high-force state shows Ca2+ sensitivity and is 7-fold higher in fast-twitch, as compared to slow-twitch, skeletal muscle fibers. Fiber Vo or the maximal cross-bridge cycle rate is highly correlated with and thought to be dependent on the specific activity of the myosin or myofibrillar ATPase. The hierarchy for Vo is the Type IIb > IIx > IIa > I. This functional difference for the fast fiber types explains the higher Vo observed in the predominantly Type IIb SVL vs. the mixed fast Type IIa and IIb EDL muscle. A plot of Vo vs. species size demonstrates that an inverse relationship exists between Vo and body mass. From the standpoint of work capacity, the important property is power output. An analysis of individual muscles indicates that peak power is obtained at loads considerably below 50% of Po. Individuals with a high percentage of fast-twitch fibers generate a greater torque and higher power at a given velocity than those with predominantly slow-twitch fibers. In humans, mean peak power occurred in a ratio of 10:5:1 for the Type IIb, IIa, and I fibers. The in vivo measurement of the torque-velocity relationship and Vmax in human muscle is difficult because of limitations inherent in the equipment used and the inability to study the large limb muscles independently. Nevertheless, the in vivo torque-velocity relationships are similar to those measured in vitro in animals. This observation suggests that little central nervous system inhibition exists and that healthy subjects are able to achieve maximal activation of their muscles. Although peak isometric tension is not dependent on fiber type distribution, a positive correlation exists between the percentage of fast fibers and peak torque output at moderate-to-high angular isokinetic velocities. Consequently, peak power output is substantially greater in subjects possessing a predominance of fast fibers. The mechanical properties of slow and fast muscles do adapt to programs of regular exercise. Endurance exercise training has been shown to increase the Vo of the slow soleus by 20%. This increase could have been caused by either a small increase in all, or most, of the fibers, or to a conversion of a few fibers from slow to fast. Recently, the increase was shown to be caused by the former, as the individual slow Type I fibers of the soleus showed a 20% increase in Vo, but there was little or no change in the percentage of fast fibers. The increased Vo was correlated with, and likely caused by, an increased fiber ATPase. We hypothesize that the increased ATPase and cross-bridge cycling speed might be attributable to an increased expression of fast MLCs in the slow Type I fibers (Fig. 14.10). This hypothesis is based on the fact that light chains have been shown to be involved in the power stroke, and removal of light chains depresses force and velocity. Regular endurance exercise training had no effect on fiber size, but with prolonged durations of daily training it depressed Po and peak power. When the training is maintained over prolonged periods, it may even induce atrophy of the slow Type I and fast Type IIa fibers. (ABSTRACT TRUNCATED)
Cell type-specific roles of Jak3 in IL-2-induced proliferative signal transduction
Fujii, Hodaka
2007-01-01
Binding of IL-2 to its specific receptor induces activation of two members of Jak family protein tyrosine kinases, Jak1 and Jak3. An IL-2R-reconstituted NIH 3T3 fibroblast cell line proliferates in response to IL-2 only when hematopoietic lineage-specific Jak3 is ectopically expressed. However, the mechanism of Jak3-dependent proliferation in the fibroblast cell line is not known. Here, I showed that Jak3 expression is dispensable for IL-2-induced activation of Jak1 and Stat proteins and expression of nuclear proto-oncogenes in the IL-2R-reconstituted fibroblast cell line. However, Jak3 expression markedly enhanced these IL-2-induced signaling events. In contrast, Jak3 expression was essential for induction of cyclin genes involved in the G1-S transition. These data suggest a critical role of Jak3 in IL-2 signaling in the fibroblast cell line and may provide further insight into the cell type-specific mechanism of cytokine signaling. PMID:17266928
Accretion-induced variability links young stellar objects, white dwarfs, and black holes.
Scaringi, Simone; Maccarone, Thomas J; Körding, Elmar; Knigge, Christian; Vaughan, Simon; Marsh, Thomas R; Aranzana, Ester; Dhillon, Vikram S; Barros, Susana C C
2015-10-01
The central engines of disc-accreting stellar-mass black holes appear to be scaled down versions of the supermassive black holes that power active galactic nuclei. However, if the physics of accretion is universal, it should also be possible to extend this scaling to other types of accreting systems, irrespective of accretor mass, size, or type. We examine new observations, obtained with Kepler/K2 and ULTRACAM, regarding accreting white dwarfs and young stellar objects. Every object in the sample displays the same linear correlation between the brightness of the source and its amplitude of variability (rms-flux relation) and obeys the same quantitative scaling relation as stellar-mass black holes and active galactic nuclei. We also show that the most important parameter in this scaling relation is the physical size of the accreting object. This establishes the universality of accretion physics from proto-stars still in the star-forming process to the supermassive black holes at the centers of galaxies.
Accretion-induced variability links young stellar objects, white dwarfs, and black holes
Scaringi, Simone; Maccarone, Thomas J.; Körding, Elmar; Knigge, Christian; Vaughan, Simon; Marsh, Thomas R.; Aranzana, Ester; Dhillon, Vikram S.; Barros, Susana C. C.
2015-01-01
The central engines of disc-accreting stellar-mass black holes appear to be scaled down versions of the supermassive black holes that power active galactic nuclei. However, if the physics of accretion is universal, it should also be possible to extend this scaling to other types of accreting systems, irrespective of accretor mass, size, or type. We examine new observations, obtained with Kepler/K2 and ULTRACAM, regarding accreting white dwarfs and young stellar objects. Every object in the sample displays the same linear correlation between the brightness of the source and its amplitude of variability (rms-flux relation) and obeys the same quantitative scaling relation as stellar-mass black holes and active galactic nuclei. We also show that the most important parameter in this scaling relation is the physical size of the accreting object. This establishes the universality of accretion physics from proto-stars still in the star-forming process to the supermassive black holes at the centers of galaxies. PMID:26601307
Metabolic and hormonal responses of growing modern meat type chickens to fasting
USDA-ARS?s Scientific Manuscript database
The present study compared the effects of fasting on circulating concentrations of glucose, insulin and glucagon in male and female modern meat-type chickens (Ross 708) at three ages (19 d, 33 d and 47 d). Plasma concentrations of glucose were reduced by fasting with reductions of 24.9% (19-d-old),...
Oxygen isotopes and the moon-forming giant impact.
Wiechert, U; Halliday, A N; Lee, D C; Snyder, G A; Taylor, L A; Rumble, D
2001-10-12
We have determined the abundances of 16O, 17O, and 18O in 31 lunar samples from Apollo missions 11, 12, 15, 16, and 17 using a high-precision laser fluorination technique. All oxygen isotope compositions plot within +/-0.016 per mil (2 standard deviations) on a single mass-dependent fractionation line that is identical to the terrestrial fractionation line within uncertainties. This observation is consistent with the Giant Impact model, provided that the proto-Earth and the smaller impactor planet (named Theia) formed from an identical mix of components. The similarity between the proto-Earth and Theia is consistent with formation at about the same heliocentric distance. The three oxygen isotopes (delta17O) provide no evidence that isotopic heterogeneity on the Moon was created by lunar impacts.
Anatomy of a flaring proto-planetary disk around a young intermediate-mass star.
Lagage, Pierre-Olivier; Doucet, Coralie; Pantin, Eric; Habart, Emilie; Duchêne, Gaspard; Ménard, François; Pinte, Christophe; Charnoz, Sébastien; Pel, Jan-Willem
2006-10-27
Although planets are being discovered around stars more massive than the Sun, information about the proto-planetary disks where such planets have built up is sparse. We have imaged mid-infrared emission from polycyclic aromatic hydrocarbons at the surface of the disk surrounding the young intermediate-mass star HD 97048 and characterized the disk. The disk is in an early stage of evolution, as indicated by its large content of dust and its hydrostatic flared geometry, indicative of the presence of a large amount of gas that is well mixed with dust and gravitationally stable. The disk is a precursor of debris disks found around more-evolved A stars such as beta-Pictoris and provides the rare opportunity to witness the conditions prevailing before (or during) planet formation.
Detection of accreting gas toward HD 45677: A newly recognized, Herbig Be proto-planetary system
NASA Technical Reports Server (NTRS)
Grady, C. A.; Bjorkman, K. S.; Shepherd, D.; Schulte-Ladbeck, R. E.; Perez, M. R.; Dewinter, D.; The, P. S.
1993-01-01
We report detection of high velocity, accreting gas toward the Be star with IR excess and bipolar nebula, HD 45677. High velocity (+200 to +400 km/s), variable column density gas is visible in all IUE spectra from 1979-1992 in transitions of Si II, C II, Al III, Fe III, Si IV, and C IV. Low-velocity absorption profiles from low oscillator-strength transitions of Si II, Fe II, and Zn II exhibit double-peaked absorption profiles similar to those previously reported in optical spectra of FU Orionis objects. The UV absorption data, together with previously reported analyses of the IR excess and polarization of this object, suggest that HD 45677 is a massive, Herbig Be star with an actively accreting circumstellar, proto-planetary disk.
Sousa, Filipa L.; Shavit-Grievink, Liat; Allen, John F.; Martin, William F.
2013-01-01
An open question regarding the evolution of photosynthesis is how cyanobacteria came to possess the two reaction center (RC) types, Type I reaction center (RCI) and Type II reaction center (RCII). The two main competing theories in the foreground of current thinking on this issue are that either 1) RCI and RCII are related via lineage divergence among anoxygenic photosynthetic bacteria and became merged in cyanobacteria via an event of large-scale lateral gene transfer (also called "fusion" theories) or 2) the two RC types are related via gene duplication in an ancestral, anoxygenic but protocyanobacterial phototroph that possessed both RC types before making the transition to using water as an electron donor. To distinguish between these possibilities, we studied the evolution of the core (bacterio)chlorophyll biosynthetic pathway from protoporphyrin IX (Proto IX) up to (bacterio)chlorophyllide a. The results show no dichotomy of chlorophyll biosynthesis genes into RCI- and RCII-specific chlorophyll biosynthetic clades, thereby excluding models of fusion at the origin of cyanobacteria and supporting the selective-loss hypothesis. By considering the cofactor demands of the pathway and the source genes from which several steps in chlorophyll biosynthesis are derived, we infer that the cell that first synthesized chlorophyll was a cobalamin-dependent, heme-synthesizing, diazotrophic anaerobe. PMID:23258841
Sousa, Filipa L; Shavit-Grievink, Liat; Allen, John F; Martin, William F
2013-01-01
An open question regarding the evolution of photosynthesis is how cyanobacteria came to possess the two reaction center (RC) types, Type I reaction center (RCI) and Type II reaction center (RCII). The two main competing theories in the foreground of current thinking on this issue are that either 1) RCI and RCII are related via lineage divergence among anoxygenic photosynthetic bacteria and became merged in cyanobacteria via an event of large-scale lateral gene transfer (also called "fusion" theories) or 2) the two RC types are related via gene duplication in an ancestral, anoxygenic but protocyanobacterial phototroph that possessed both RC types before making the transition to using water as an electron donor. To distinguish between these possibilities, we studied the evolution of the core (bacterio)chlorophyll biosynthetic pathway from protoporphyrin IX (Proto IX) up to (bacterio)chlorophyllide a. The results show no dichotomy of chlorophyll biosynthesis genes into RCI- and RCII-specific chlorophyll biosynthetic clades, thereby excluding models of fusion at the origin of cyanobacteria and supporting the selective-loss hypothesis. By considering the cofactor demands of the pathway and the source genes from which several steps in chlorophyll biosynthesis are derived, we infer that the cell that first synthesized chlorophyll was a cobalamin-dependent, heme-synthesizing, diazotrophic anaerobe.
Modulation of skeletal muscle fiber type by mitogen-activated protein kinase signaling.
Shi, Hao; Scheffler, Jason M; Pleitner, Jonathan M; Zeng, Caiyun; Park, Sungkwon; Hannon, Kevin M; Grant, Alan L; Gerrard, David E
2008-08-01
Skeletal muscle is composed of diverse fiber types, yet the underlying molecular mechanisms responsible for this diversification remain unclear. Herein, we report that the extracellular signal-regulated kinase (ERK) 1/2 pathway, but not p38 or c-Jun NH(2)-terminal kinase (JNK), is preferentially activated in fast-twitch muscles. Pharmacological blocking of ERK1/2 pathway increased slow-twitch fiber type-specific reporter activity and repressed those associated with the fast-twitch fiber phenotype in vitro. Overexpression of a constitutively active ERK2 had an opposite effect. Inhibition of ERK signaling in cultured myotubes increased slow-twitch fiber-specific protein accumulation while repressing those characteristic of fast-twitch fibers. Overexpression of MAP kinase phosphatase-1 (MKP1) in mouse and rat muscle fibers containing almost exclusively type IIb or IIx fast myosin heavy chain (MyHC) isoforms induced de novo synthesis of the slower, more oxidative type IIa and I MyHCs in a time-dependent manner. Conversion to the slower phenotype was confirmed by up-regulation of slow reporter gene activity and down-regulation of fast reporter activities in response to forced MKP1 expression in vivo. In addition, activation of ERK2 signaling induced up-regulation of fast-twitch fiber program in soleus. These data suggest that the MAPK signaling, most likely the ERK1/2 pathway, is necessary to preserve the fast-twitch fiber phenotype with a concomitant repression of slow-twitch fiber program.
Restoring integrity--A grounded theory of coping with a fast track surgery programme.
Jørgensen, Lene Bastrup; Fridlund, Bengt
2016-01-01
The aim of this study was to generate a theory conceptualizing and explaining behavioural processes involved in coping in order to identify the predominant coping types and coping type-specific features. Patients undergoing fast track procedures do not experience a higher risk of complications, readmission, or mortality. However, such programmes presuppose an increasing degree of patient involvement, placing high educational, physical, and mental demands on the patients. There is a lack of knowledge about how patients understand and cope with fast track programmes. The study design used classical grounded theory. The study used a multimodal approach with qualitative and quantitative data sets from 14 patients. Four predominant types of coping, with distinct physiological, cognitive, affective, and psychosocial features, existed among patients going through a fast track total hip replacement programme. These patients' main concern was to restore their physical and psychosocial integrity, which had been compromised by reduced function and mobility in daily life. To restore integrity they economized their mental resources, while striving to fulfil the expectations of the fast track programme. This goal was achieved by being mentally proactive and physically active. Three out of the four predominant types of coping matched the expectations expressed in the fast track programme. The non-matching behaviour was seen among the most nervous patients, who claimed the right to diverge from the programme. In theory, four predominant types of coping with distinct physiological, cognitive, affective, and psychosocial features occur among patients going through a fast track total hip arthroplasty programme.
Bodicoat, Danielle H; Carter, Patrice; Comber, Alexis; Edwardson, Charlotte; Gray, Laura J; Hill, Sian; Webb, David; Yates, Thomas; Davies, Melanie J; Khunti, Kamlesh
2015-06-01
We investigated whether a higher number of fast-food outlets in an individual's home neighbourhood is associated with increased prevalence of type 2 diabetes mellitus and related risk factors, including obesity. Cross-sectional study. Three UK-based diabetes screening studies (one general population, two high-risk populations) conducted between 2004 and 2011. The primary outcome was screen-detected type 2 diabetes. Secondary outcomes were risk factors for type 2 diabetes. In total 10 461 participants (mean age 59 years; 53% male; 21% non-White ethnicity). There was a higher number of neighbourhood (500 m radius from home postcode) fast-food outlets among non-White ethnic groups (P<0.001) and in socially deprived areas (P<0.001). After adjustment (social deprivation, urban/rural, ethnicity, age, sex), more fast-food outlets was associated with significantly increased odds for diabetes (OR=1.02; 95% CI 1.00, 1.04) and obesity (OR=1.02; 95% CI 1.00, 1.03). This suggests that for every additional two outlets per neighbourhood, we would expect one additional diabetes case, assuming a causal relationship between the fast-food outlets and diabetes. These results suggest that increased exposure to fast-food outlets is associated with increased risk of type 2 diabetes and obesity, which has implications for diabetes prevention at a public health level and for those granting planning permission to new fast-food outlets.
The implications of Ramadan fasting for human health and well-being.
Alkandari, Jasem Ramadan; Maughan, Ronald J; Roky, Rachida; Aziz, Abdul Rashid; Karli, Umid
2012-01-01
Islamic Ramadan is a 29-30 day fast in which food, fluids, medications, drugs and smoking are prohibited during the daylight hours which can be extended between 13 and 18 h · day(-1) depending on the geographical location and season. The majority of health-specific findings related to Ramadan fasting are mixed. The likely causes for these heterogeneous findings lie in the amount of daily time of fasting, number of subjects who smoke, take oral medications, and/or receive intravenous fluids, in the type of food and eating habits and in changes in lifestyle. During Ramadan fasting, glucose homeostasis is maintained by meals taken during night time before dawn and by liver glycogen stores. Changes in serum lipids are variable and depend on the quality and quantity of food intake, physical activity and exercise, and changes in body weight. Compliant, well-controlled type II diabetics may observe Ramadan fasting, but fasting is not recommended for type I, noncompliant, poorly controlled and pregnant diabetics. There are no adverse effects of Ramadan fasting on respiratory and cardiovascular systems, haematologic profile, endocrine, and neuropsychiatric functions. Although Ramadan fasting is safe for all healthy individuals, those with various diseases should consult their physicians and follow medical and scientific recommendations.
The fine structure of the Saturnian ring system
NASA Technical Reports Server (NTRS)
Houpis, H. L. F.; Mendis, D. A.
1983-01-01
A dust disk within a planetary magnetosphere constitutes a novel type of dust-ring current. Such an azimuthal current carrying dust disk is subject to the dusty plasma analog of the well known finite-resistivity 'tearing' mode instability in regular plasma current sheets, at long wavelengths. It is proposed that the presently observed fine ringlet of the Saturnian ring system is a relic of this process operating at cosmogonic times and breaking up the initial proto-ring (which may be regarded as an admixture of fine dust and plasma) into an ensemble of thin ringlets. It is shown that this instability develops at a rate that is many orders of magnitude faster than any other known instability, when the disk thickness reaches a value that is comparable to its present observed value.
New roles for Dicer in the nucleolus and its relevance to cancer.
Roche, Benjamin; Arcangioli, Benoît; Martienssen, Rob
2017-09-17
The nucleolus is a distinct compartment of the nucleus responsible for ribosome biogenesis. Mis-regulation of nucleolar functions and of the cellular translation machinery has been associated with disease, in particular with many types of cancer. Indeed, many tumor suppressors (p53, Rb, PTEN, PICT1, BRCA1) and proto-oncogenes (MYC, NPM) play a direct role in the nucleolus, and interact with the RNA polymerase I transcription machinery and the nucleolar stress response. We have identified Dicer and the RNA interference pathway as having an essential role in the nucleolus of quiescent Schizosaccharomyces pombe cells, distinct from pericentromeric silencing, by controlling RNA polymerase I release. We propose that this novel function is evolutionarily conserved and may contribute to the tumorigenic pre-disposition of DICER1 mutations in mammals.
Zebedin, Eva; Sandtner, Walter; Galler, Stefan; Szendroedi, Julia; Just, Herwig; Todt, Hannes; Hilber, Karlheinz
2004-08-01
Each skeletal muscle of the body contains a unique composition of "fast" and "slow" muscle fibers, each of which is specialized for certain challenges. This composition is not static, and the muscle fibers are capable of adapting their molecular composition by altered gene expression (i.e., fiber type conversion). Whereas changes in the expression of contractile proteins and metabolic enzymes in the course of fiber type conversion are well described, little is known about possible adaptations in the electrophysiological properties of skeletal muscle cells. Such adaptations may involve changes in the expression and/or function of ion channels. In this study, we investigated the effects of fast-to-slow fiber type conversion on currents via voltage-gated Na+ channels in the C(2)C(12) murine skeletal muscle cell line. Prolonged treatment of cells with 25 nM of the Ca2+ ionophore A-23187 caused a significant shift in myosin heavy chain isoform expression from the fast toward the slow isoform, indicating fast-to-slow fiber type conversion. Moreover, Na+ current inactivation was significantly altered. Slow inactivation less strongly inhibited the Na+ currents of fast-to-slow fiber type-converted cells. Compared with control cells, the Na+ currents of converted cells were more resistant to block by tetrodotoxin, suggesting enhanced relative expression of the cardiac Na+ channel isoform Na(v)1.5 compared with the skeletal muscle isoform Na(v)1.4. These results imply that fast-to-slow fiber type conversion of skeletal muscle cells involves functional adaptation of their electrophysiological properties.
Myosin content of individual human muscle fibers isolated by laser capture microdissection.
Stuart, Charles A; Stone, William L; Howell, Mary E A; Brannon, Marianne F; Hall, H Kenton; Gibson, Andrew L; Stone, Michael H
2016-03-01
Muscle fiber composition correlates with insulin resistance, and exercise training can increase slow-twitch (type I) fibers and, thereby, mitigate diabetes risk. Human skeletal muscle is made up of three distinct fiber types, but muscle contains many more isoforms of myosin heavy and light chains, which are coded by 15 and 11 different genes, respectively. Laser capture microdissection techniques allow assessment of mRNA and protein content in individual fibers. We found that specific human fiber types contain different mixtures of myosin heavy and light chains. Fast-twitch (type IIx) fibers consistently contained myosin heavy chains 1, 2, and 4 and myosin light chain 1. Type I fibers always contained myosin heavy chains 6 and 7 (MYH6 and MYH7) and myosin light chain 3 (MYL3), whereas MYH6, MYH7, and MYL3 were nearly absent from type IIx fibers. In contrast to cardiomyocytes, where MYH6 (also known as α-myosin heavy chain) is seen solely in fast-twitch cells, only slow-twitch fibers of skeletal muscle contained MYH6. Classical fast myosin heavy chains (MHC1, MHC2, and MHC4) were present in variable proportions in all fiber types, but significant MYH6 and MYH7 expression indicated slow-twitch phenotype, and the absence of these two isoforms determined a fast-twitch phenotype. The mixed myosin heavy and light chain content of type IIa fibers was consistent with its role as a transition between fast and slow phenotypes. These new observations suggest that the presence or absence of MYH6 and MYH7 proteins dictates the slow- or fast-twitch phenotype in skeletal muscle. Copyright © 2016 the American Physiological Society.
Myosin content of individual human muscle fibers isolated by laser capture microdissection
Stone, William L.; Howell, Mary E. A.; Brannon, Marianne F.; Hall, H. Kenton; Gibson, Andrew L.; Stone, Michael H.
2015-01-01
Muscle fiber composition correlates with insulin resistance, and exercise training can increase slow-twitch (type I) fibers and, thereby, mitigate diabetes risk. Human skeletal muscle is made up of three distinct fiber types, but muscle contains many more isoforms of myosin heavy and light chains, which are coded by 15 and 11 different genes, respectively. Laser capture microdissection techniques allow assessment of mRNA and protein content in individual fibers. We found that specific human fiber types contain different mixtures of myosin heavy and light chains. Fast-twitch (type IIx) fibers consistently contained myosin heavy chains 1, 2, and 4 and myosin light chain 1. Type I fibers always contained myosin heavy chains 6 and 7 (MYH6 and MYH7) and myosin light chain 3 (MYL3), whereas MYH6, MYH7, and MYL3 were nearly absent from type IIx fibers. In contrast to cardiomyocytes, where MYH6 (also known as α-myosin heavy chain) is seen solely in fast-twitch cells, only slow-twitch fibers of skeletal muscle contained MYH6. Classical fast myosin heavy chains (MHC1, MHC2, and MHC4) were present in variable proportions in all fiber types, but significant MYH6 and MYH7 expression indicated slow-twitch phenotype, and the absence of these two isoforms determined a fast-twitch phenotype. The mixed myosin heavy and light chain content of type IIa fibers was consistent with its role as a transition between fast and slow phenotypes. These new observations suggest that the presence or absence of MYH6 and MYH7 proteins dictates the slow- or fast-twitch phenotype in skeletal muscle. PMID:26676053
Synthesis of chlorophyll-c derivatives by modifying natural chlorophyll-a.
Xu, Meiyun; Kinoshita, Yusuke; Matsubara, Shogo; Tamiaki, Hitoshi
2016-03-01
Chlorophyll-a (Chl-a) was extracted from cyanobacterial cells and modified to methyl pyropheophorbide-a. The 3-vinyl-chlorin was transformed to zinc complex of the corresponding 3-acetyl-porphyrin. The zinc porphyrin was oxidized to give cis-7,8- and 17,18-dihydroxy-chlorins as well cis-7,8-cis-17,18-tetrahydroxybacteriochlorin. After zinc-demetallation, the isolated cis-7,8- and 17,18-diols were reduced at the 3-acetyl group and triply dehydrated under acidic conditions to afford two regioisomeric 3-vinyl-porphyrins, methyl divinyl-pyroprotopheophorbide-a possessing the 8-vinyl group and 17-propionate residue (one of the divinyl-protoChl-a derivatives) and methyl pyropheophorbide-c 1 possessing the 8-ethyl group and 17-acrylate residue (one of the Chl-c 1 derivatives), respectively. The resulting 7,8,17,18-tetrol was reduced and then acidically treated, giving five-fold dehydrated free base porphyrin, methyl pyropheophorbide-c 2 possessing the 3,8-divinyl groups and 17-acrylate residue (one of the Chl-c 2 derivatives). The visible absorption and fluorescence emission spectra of the three semi-synthetic 3-vinyl-porphyrins in dichloromethane were compared with those of the corresponding 8-ethyl-porphyrin bearing the 17-propionate residue, methyl pyroprotopheophorbide-a (one of the protoChl-a derivatives). The Soret and Qy absorption maxima were shifted to longer wavelengths with an increase of π-conjugation in a molecule: protoChl-a (8-CH2CH3/17-CH2CH2COOCH3) < divinyl-protoChl-a (8-CH=CH2/17-CH2CH2COOCH3) < Chl-c 1 (8-CH2CH3/17-CH=CHCOOCH3) < Chl-c 2 derivatives (8-CH=CH2/17-CH=CHCOOCH3). The 17(1),17(2)-dehydrogenation broadened the absorption bands. The emission maxima were bathochromically shifted in the same order. The reaction mechanism of the present dehydration indicates that the biosynthetic pathway of Chls-c would include the hydroxylation of the 17-propionate reside at the 17(1)-position and successive dehydration to the 17-acrylate residue.
NASA Astrophysics Data System (ADS)
Butler, Jared P.; Beaumont, Christopher
2017-04-01
The plate tectonic setting in which proto-ophiolite 'oceanic' lithosphere is created remains controversial with a number of environments suggested. Recent opinions tend to coalesce around supra-subduction zone (SSZ) forearc extension, with a popular conceptual model in which the proto-ophiolite forms during foundering of oceanic lithosphere at the time of spontaneous or induced onset of subduction. This mechanism is favored in intra-oceanic settings where the subducting lithosphere is old and the upper plate is young and thin. We investigate an alternative mechanism; namely, decoupling of the subducting oceanic lithosphere in the forearc of an active continental margin, followed by subduction zone (trench) retreat and creation of a forearc oceanic rift basin, containing proto-ophiolite lithosphere, between the continental margin and the retreating subduction zone. A template of 2D numerical model experiments examines the trade-off between strength of viscous coupling in the lithospheric subduction channel and net slab pull of the subducting lithosphere. Three tectonic styles are observed: 1) C, continuous subduction without forearc decoupling; 2) R, forearc decoupling followed by rapid subduction zone retreat; 3) B, breakoff of subducting lithosphere followed by re-initiation of subduction and in some cases, forearc decoupling (B-R). In one case (BA-B-R; where BA denotes backarc) subduction zone retreat follows backarc rifting. Subduction zone decoupling is analyzed using frictional-plastic yield theory and the Stefan solution for the separation of plates containing a viscous fluid. The numerical model results are used to explain the formation of Xigaze group ophiolites, southern Tibet, which formed in the Lhasa terrane forearc, likely following earlier subduction and not necessarily during subduction initiation. Either there was normal coupled subduction before subduction zone decoupling, or precursor slab breakoff, subduction re-initiation and then decoupling. Rapid deep upper-mantle circulation in the models during subduction zone retreat can exhume and emplace material in the forearc proto-ophiolite from as deep as the mantle transition zone, thereby explaining diamonds and other 10-15 GPa UHP phases in Tibetan ophiolites.
Can increased poleward oceanic heat flux explain the warm Cretaceous climate?
NASA Astrophysics Data System (ADS)
Schmidt, Gavin A.; Mysak, Lawrence A.
1996-10-01
The poleward transport of heat in the mid-Cretaceous (100 Ma) is examined using an idealized coupled ocean-atmosphere model. The oceanic component consists of two zonally averaged basins representing the proto-Pacific and proto-Indian oceans and models the dynamics of the meridional thermohaline circulation. The atmospheric component is a simple energy and moisture balance model which includes the diffusive meridional transport of sensible heat and moisture. The ocean model is spun up with a variety of plausible Cretaceous surface temperature and salinity profiles, and a consistent atmosphere is objectively derived based on the resultant sea surface temperature and the surface heat and freshwater fluxes. The coupled model does not exhibit climate drift. Multiple equilibria of the coupled model are found that break the initial symmetry of the ocean circulation; several of these equilibria have one-cell (northern or southern sinking) thermohaline circulation patterns. Two main classes of circulation are found: circulations where the densest water is relatively cool and is formed at the polar latitudes and circulations where the densest water is warm, but quite saline, and the strongest sinking occurs at the tropics. In all cases, significant amounts of warm, saline bottom water are formed in the proto-Indian basin which modify the deepwater characteristics in the larger (proto-Pacific) basin. Temperatures in the deep ocean are warm, 10°-17°C, in agreement with benthic foraminiferal oxygen isotope data. The poleward transport of heat in the modeled Cretaceous oceans is larger than in some comparable models of the present day thermohaline circulation and significantly larger than estimates of similar processes in the present-day ocean. It is consistently larger in the polar sinking cases when compared with that seen in the tropical sinking cases, but this represents an increase of only 10%. The largest increase over present-day model transports is in the atmospheric latent heat transport, where an increased hydrological cycle (especially in the tropical sinking cases) contributes up to an extra 1 PW of poleward heat transport. Better constraints on the oceanic deepwater circulation during this period are necessary before the meridional circulation can be unambiguously described.
Georgiades, Kalliopi; Raoult, Didier
2011-10-20
Mitochondria are thought to have evolved from eubacteria-like endosymbionts; however, the origin of the mitochondrion remains a subject of debate. In this study, we investigated the phenomenon of chimerism in mitochondria to shed light on the origin of these organelles by determining which species played a role in their formation. We used the mitochondria of four distinct organisms, Reclinomonas americana, Homo sapiens, Saccharomyces cerevisiae and multichromosome Pediculus humanus, and attempted to identify the origin of each mitochondrial gene. Our results suggest that the origin of mitochondrial genes is not limited to the Rickettsiales and that the creation of these genes did not occur in a single event, but through multiple successive events. Some of these events are very old and were followed by events that are more recent and occurred through the addition of elements originating from current species. The points in time that the elements were added and the parental species of each gene in the mitochondrial genome are different to the individual species. These data constitute strong evidence that mitochondria do not have a single common ancestor but likely have numerous ancestors, including proto-Rickettsiales, proto-Rhizobiales and proto-Alphaproteobacteria, as well as current alphaproteobacterial species. The analysis of the multichromosome P. humanus mitochondrion supports this mechanism. The most plausible scenario of the origin of the mitochondrion is that ancestors of Rickettsiales and Rhizobiales merged in a proto-eukaryotic cell approximately one billion years ago. The fusion of the Rickettsiales and Rhizobiales cells was followed by gene loss, genomic rearrangements and the addition of alphaproteobacterial elements through ancient and more recent recombination events. Each gene of each of the four studied mitochondria has a different origin, while in some cases, multichromosomes may allow for enhanced gene exchange. Therefore, the tree of life is not sufficient to explain the chimeric structure of current genomes, and the theory of a single common ancestor and a top-down tree does not reflect our current state of knowledge. Mitochondrial evolution constitutes a rhizome, and it should be represented as such.
Park, Joon-Heum; Tran, Lien H.; Jung, Sunyo
2017-01-01
Possible crosstalk between the carotenoid and porphyrin biosynthetic pathways under photooxidative conditions was investigated by using their biosynthetic inhibitors, norflurazon (NF) and oxyfluorfen (OF). High levels of protoporphyrin IX (Proto IX) accumulated in rice plants treated with OF, whereas Proto IX decreased in plants treated with NF. Both NF and OF treatments resulted in greater decreases in MgProto IX, MgProto IX methyl ester, and protochlorophyllide. Activities and transcript levels of most porphyrin biosynthetic enzymes, particularly in the Mg-porphyrin branch, were greatly down-regulated in NF and OF plants. In contrast, the transcript levels of GSA, PPO1, and CHLD as well as FC2 and HO2 were up-regulated in NF-treated plants, while only moderate increases in FC2 and HO2 were observed in the early stage of OF treatment. Phytoene, antheraxanthin, and zeaxanthin showed high accumulation in NF-treated plants, whereas other carotenoid intermediates greatly decreased. Transcript levels of carotenoid biosynthetic genes, PSY1 and PDS, decreased in response to NF and OF, whereas plants in the later stage of NF treatment exhibited up-regulation of BCH and VDE as well as recovery of PDS. However, perturbed porphyrin biosynthesis by OF did not noticeably influence levels of carotenoid metabolites, regardless of the strong down-regulation of carotenoid biosynthetic genes. Both NF and OF plants appeared to provide enhanced protection against photooxidative damage, not only by scavenging of Mg-porphyrins, but also by up-regulating FC2, HO2, and Fe-chelatase, particularly with increased levels of zeaxanthin via up-regulation of BCH and VDE in NF plants. On the other hand, the up-regulation of GSA, PPO1, and CHLD under inhibition of carotenogenic flux may be derived from the necessity to recover impaired chloroplast biogenesis during photooxidative stress. Our study demonstrates that perturbations in carotenoid and porphyrin biosynthesis coordinate the expression of their biosynthetic genes to sustain plastid function at optimal levels by regulating their metabolic flux in plants under adverse stress conditions. PMID:29209351
Park, Joon-Heum; Tran, Lien H; Jung, Sunyo
2017-01-01
Possible crosstalk between the carotenoid and porphyrin biosynthetic pathways under photooxidative conditions was investigated by using their biosynthetic inhibitors, norflurazon (NF) and oxyfluorfen (OF). High levels of protoporphyrin IX (Proto IX) accumulated in rice plants treated with OF, whereas Proto IX decreased in plants treated with NF. Both NF and OF treatments resulted in greater decreases in MgProto IX, MgProto IX methyl ester, and protochlorophyllide. Activities and transcript levels of most porphyrin biosynthetic enzymes, particularly in the Mg-porphyrin branch, were greatly down-regulated in NF and OF plants. In contrast, the transcript levels of GSA, PPO1 , and CHLD as well as FC2 and HO2 were up-regulated in NF-treated plants, while only moderate increases in FC2 and HO2 were observed in the early stage of OF treatment. Phytoene, antheraxanthin, and zeaxanthin showed high accumulation in NF-treated plants, whereas other carotenoid intermediates greatly decreased. Transcript levels of carotenoid biosynthetic genes, PSY1 and PDS , decreased in response to NF and OF, whereas plants in the later stage of NF treatment exhibited up-regulation of BCH and VDE as well as recovery of PDS . However, perturbed porphyrin biosynthesis by OF did not noticeably influence levels of carotenoid metabolites, regardless of the strong down-regulation of carotenoid biosynthetic genes. Both NF and OF plants appeared to provide enhanced protection against photooxidative damage, not only by scavenging of Mg - porphyrins, but also by up-regulating FC2, HO2 , and Fe-chelatase, particularly with increased levels of zeaxanthin via up-regulation of BCH and VDE in NF plants. On the other hand, the up-regulation of GSA, PPO1 , and CHLD under inhibition of carotenogenic flux may be derived from the necessity to recover impaired chloroplast biogenesis during photooxidative stress. Our study demonstrates that perturbations in carotenoid and porphyrin biosynthesis coordinate the expression of their biosynthetic genes to sustain plastid function at optimal levels by regulating their metabolic flux in plants under adverse stress conditions.
Cancer Strikes Out!/Definitions/ Glossary/ Common Types
... have an indolent (slow-growing) course or an aggressive (fast-growing) course. These subtypes behave and respond ... non-Hodgkin's lymphoma, which can be divided into aggressive (fast-growing) and indolent (slow-growing) types and ...
Some aspects of the role of rift inheritance on Alpine-type orogens
NASA Astrophysics Data System (ADS)
Tugend, Julie; Manatschal, Gianreto; Mohn, Geoffroy; Chevrot, Sébastien
2017-04-01
Processes commonly recognized as fundamental for the formation of collisional orogens include oceanic subduction, arc-continent and continent-continent collision. As collisional belts result from the closure of oceanic basins and subsequent inversion of former rifted margins, their formation and evolution may also in theory be closely interlinked with the initial architecture of the former rifted margins. This assumption is indeed more likely to be applicable in the case of Alpine-type orogens, mainly controlled by mechanical processes and mostly devoid of arc-related magmatism. More and more studies from present-day magma-poor rifted margins illustrate the complex evolution of hyperextended domains (i.e. severely thinned continental crust (<10 km) and/or exhumed serpentinized mantle with relatively minor magmatic additions) between unequivocal continental and oceanic domains. In this contribution, we compare the deep structure of the Pyrenean and Alpine belts to discuss some aspects of the relative role of rift-inherited hyperextension and collisional processes in building Alpine-type orogens. The Pyrenees and Western to Central Alps respectively result from the inversion of a Late Jurassic to Mid Cretaceous and an Early to Middle Jurassic rift system eventually floored by hyperextended crust, exhumed mantle and/or proto-oceanic crust. In spite of uncertainties on the initial width of the hyperextended and proto-oceanic domains, the rift-related pre-collisional architecture of the Alps shows many similarities with that proposed for the Pyrenees. Remnants of these domains occur in the internal parts of both orogens, but they are largely affected by orogeny-related deformation and show a HP-LT to HT-MP metamorphic overprint in the Alps as a result of a polyphase deformation history. Yet, recent high-resolution tomographic images across the Pyrenees (PYROPE) and the Alps (CIFALPS) reveal a surprisingly comparable present-day overall crustal and lithospheric structure. Based on the comparison between the two orogens we discuss: (1) the nature and depth of decoupling levels inherited from hyperextension; (2) the implications for restorations and interpretations of orogenic roots (former hyperextended domains vs. lower crust only); and (3) the nature and major role of buttresses in controlling the final stage of collisional processes. Eventually, we discuss the variability of the role of rift-inheritance in building Alpine-type orogens. The Pyrenees seem to represent one extreme, where rift-inheritance is important at different stages of collisional processes. In contrast, in the Alps the role of rift-inheritance is subtler, likely because of its more complex and polyphase compressional deformation history.
Matsuura, Tetsuya; Li, Yong; Giacobino, Jean-Paul; Fu, Freddie H; Huard, Johnny
2007-11-01
We used a mouse model of cardiotoxin injury to examine fiber type conversion during muscle repair. We evaluated the soleus muscles of 37 wild-type mice at 2, 4, 8, and 12 weeks after injury. We also used antibodies (fMHC and sMHC) against fast and slow myosin heavy chain to classify the myofibers into three categories: fast-, slow-, and mixed (hybrid)-type myofibers (myofibers expressing both fMHC and sMHC). Our results revealed an increase in the percentage of slow-type myofibers and a decrease in the percentage of fast-type myofibers during the repair process. The percentage of hybrid-type myofibers increased 2 weeks after injury, then gradually decreased over the following 6 weeks. Similarly, our analysis of centronucleated myofibers showed an increase in the percentage of slow-type myofibers and decreases in the percentages of fast- and hybrid-type myofibers. We also investigated the relationship between myofiber type conversion and peroxisome proliferator-activated receptor-gamma coactivator-1alpha (PGC-1alpha). The expression of both PGC-1alpha protein, which is expressed in both the nucleus and the cytoplasm of regenerating myofibers, and sMHC protein increased with time after cardiotoxin injection, but we observed no significant differential expression of fMHC protein in regenerating muscle fibers during muscle repair. PGC-1alpha-positive myofibers underwent fast to slow myofiber type conversion during the repair process. These results suggest that PGC-1alpha contributes to myofiber type conversion after muscle injury and that this phenomenon could influence the recovery of the injured muscle. (c) 2007 Orthopaedic Research Society.
Francis, Saritha; Chandran, Sindhu Padinjareveedu; Nesheera, K K; Jacob, Jose
2017-05-01
Hyperinsulinemia is contributed by insulin resistance, hepatic insulin uptake, insulin secretion and rate of insulin degradation. Family history of type 2 diabetes mellitus has been reported to cause hyperinsulinemia. Correlation of fasting insulin with post glucose load Oral Glucose Tolerance Test (OGTT) insulin in young adults and their partitioning according to family history of type 2 diabetes. In this observational cross-sectional study, clinical evaluation and biochemical assays of insulin and diabetes related parameters, and secondary clinical influences on type 2 diabetes in volunteers were done for inclusion as participants (n=90) or their exclusion. Cut off levels of quantitative biochemical variables were fixed such that they included the effects of insulin resistance, but excluded other secondary clinical influences. Distribution was analysed by Shapiro-Wilk test; equality of variances by Levene's test; Log 10 transformations for conversion of groups to Gaussian distribution and for equality of variances in the groups compared. When the groups compared had Gaussian distribution and there was equality of variance, parametric methods were used. Otherwise, non parametric methods were used. Fasting insulin was correlating significantly with 30, 60 and 120 minute OGTT insulin showing that hyperinsulinemia in the fasting state was related to hyperinsulinemia in the post glucose load states. When fasting and post glucose load OGTT insulin were partitioned into those without and with family history of type 2 diabetes, maximum difference was seen in fasting insulin (p<0.001), followed by 120 (p=0.001) and 60 (p= 0.002) minute OGTT insulin. The 30 minute insulin could not be partitioned (p=0.574). Fasting, 60 and 120 minute OGTT insulin can be partitioned according to family history of type 2 diabetes, demonstrating stratification and heterogeneity in the insulin sample. Of these, fasting insulin was better partitioned and could be used for baseline reference interval calculations.
Sensing of substratum rigidity and directional migration by fast-crawling cells
NASA Astrophysics Data System (ADS)
Okimura, Chika; Sakumura, Yuichi; Shimabukuro, Katsuya; Iwadate, Yoshiaki
2018-05-01
Living cells sense the mechanical properties of their surrounding environment and respond accordingly. Crawling cells detect the rigidity of their substratum and migrate in certain directions. They can be classified into two categories: slow-moving and fast-moving cell types. Slow-moving cell types, such as fibroblasts, smooth muscle cells, mesenchymal stem cells, etc., move toward rigid areas on the substratum in response to a rigidity gradient. However, there is not much information on rigidity sensing in fast-moving cell types whose size is ˜10 μ m and migration velocity is ˜10 μ m /min . In this study, we used both isotropic substrata with different rigidities and an anisotropic substratum that is rigid on the x axis but soft on the y axis to demonstrate rigidity sensing by fast-moving Dictyostelium cells and neutrophil-like differentiated HL-60 cells. Dictyostelium cells exerted larger traction forces on a more rigid isotropic substratum. Dictyostelium cells and HL-60 cells migrated in the "soft" direction on the anisotropic substratum, although myosin II-null Dictyostelium cells migrated in random directions, indicating that rigidity sensing of fast-moving cell types differs from that of slow types and is induced by a myosin II-related process.
Sensing of substratum rigidity and directional migration by fast-crawling cells.
Okimura, Chika; Sakumura, Yuichi; Shimabukuro, Katsuya; Iwadate, Yoshiaki
2018-05-01
Living cells sense the mechanical properties of their surrounding environment and respond accordingly. Crawling cells detect the rigidity of their substratum and migrate in certain directions. They can be classified into two categories: slow-moving and fast-moving cell types. Slow-moving cell types, such as fibroblasts, smooth muscle cells, mesenchymal stem cells, etc., move toward rigid areas on the substratum in response to a rigidity gradient. However, there is not much information on rigidity sensing in fast-moving cell types whose size is ∼10 μm and migration velocity is ∼10 μm/min. In this study, we used both isotropic substrata with different rigidities and an anisotropic substratum that is rigid on the x axis but soft on the y axis to demonstrate rigidity sensing by fast-moving Dictyostelium cells and neutrophil-like differentiated HL-60 cells. Dictyostelium cells exerted larger traction forces on a more rigid isotropic substratum. Dictyostelium cells and HL-60 cells migrated in the "soft" direction on the anisotropic substratum, although myosin II-null Dictyostelium cells migrated in random directions, indicating that rigidity sensing of fast-moving cell types differs from that of slow types and is induced by a myosin II-related process.
77 FR 50544 - Reports, Forms, and Recordkeeping Requirements
Federal Register 2010, 2011, 2012, 2013, 2014
2012-08-21
... stations, fast food restaurants, and other types of sites frequented by children during the time in which..., fast food restaurants, and other types of sites frequented by children during the time in which the...
Zhang, Hui; Liu, Deruo; Li, Shanqing; Zheng, Yongqing; Yang, Xinjie; Li, Xi; Zhang, Quan; Qin, Na; Lu, Jialin; Ren-Heidenreich, Lifen; Yang, Huiyi; Wu, Yuhua; Zhang, Xinyong; Nong, Jingying; Sun, Yifen; Zhang, Shucai
2013-11-01
Somatic DNA mutations affecting the epidermal growth factor receptor (EGFR) signaling pathway are known to predict responsiveness to EGFR-tyrosine kinase inhibitor drugs in patients with advanced non-small-cell lung cancers. We evaluated a sensitive liquidchip platform for detecting EGFR, KRAS (alias Ki-ras), proto-oncogene B-Raf, and phosphatidylinositol 3-kinase CA mutations in plasma samples, which were highly correlated with matched tumor tissues from 86 patients with advanced non-small-cell lung cancers. Either EGFR exon 19 or 21 mutations were detected in 36 patients: 23 of whom had identical mutations in both their blood and tissue samples; whereas mutations in the remaining 13 were found only in their tumor samples. These EGFR mutations occurred at a significantly higher frequency in females, never-smokers, and in patients with adenocarcinomas (P ≤ 0.001). The EGFR exon 20 T790M mutation was detected in only one of the paired samples [100% (95% CI, 96% to 100%) agreement]. For KRAS, proto-oncogene B-Raf, and phosphatidylinositol 3-kinase CA mutations, the overall agreements were 97% (95% CI, 90% to 99%), 98% (95% CI, 92% to 99%), and 97% (95% CI, 90% to 99%), respectively, and these were not associated with age, sex, smoking history, or histopathologic type. In conclusion, mutations detected in plasma correlated strongly with mutation profiles in each respective tumor sample, suggesting that this liquidchip platform may offer a rapid and noninvasive method for predicting tumor responsiveness to EGFR-tyrosine kinase inhibitor drugs in patients with advanced non-small-cell lung cancers. Copyright © 2013 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.
Isotopic Dichotomy among Meteorites and Its Bearing on the Protoplanetary Disk
NASA Astrophysics Data System (ADS)
Scott, Edward R. D.; Krot, Alexander N.; Sanders, Ian S.
2018-02-01
Whole rock Δ17O and nucleosynthetic isotopic variations for chromium, titanium, nickel, and molybdenum in meteorites define two isotopically distinct populations: carbonaceous chondrites (CCs) and some achondrites, pallasites, and irons in one and all other chondrites and differentiated meteorites in the other. Since differentiated bodies accreted 1–3 Myr before the chondrites, the isotopic dichotomy cannot be attributed to temporal variations in the disk. Instead, the two populations were most likely separated in space, plausibly by proto-Jupiter. Formation of CCs outside Jupiter could account for their characteristic chemical and isotopic composition. The abundance of refractory inclusions in CCs can be explained if they were ejected by disk winds from near the Sun to the disk periphery where they spiraled inward due to gas drag. Once proto-Jupiter reached 10–20 M ⊕, its external pressure bump could have prevented millimeter- and centimeter-sized particles from reaching the inner disk. This scenario would account for the enrichment in CCs of refractory inclusions, refractory elements, and water. Chondrules in CCs show wide ranges in Δ17O as they formed in the presence of abundant 16O-rich refractory grains and 16O-poor ice particles. Chondrules in other chondrites (ordinary, E, R, and K groups) show relatively uniform, near-zero Δ17O values as refractory inclusions and ice were much less abundant in the inner solar system. The two populations were plausibly mixed together by the Grand Tack when Jupiter and Saturn migrated inward emptying and then repopulating the asteroid belt with roughly equal masses of planetesimals from inside and outside Jupiter’s orbit (S- and C-type asteroids).
First Large-scale Herbig-Haro Jet Driven by a Proto-brown Dwarf
NASA Astrophysics Data System (ADS)
Riaz, B.; Briceño, C.; Whelan, E. T.; Heathcote, S.
2017-07-01
We report the discovery of a new Herbig-Haro jet, HH 1165, in SOAR narrow-band imaging of the vicinity of the σ Orionis cluster. HH 1165 shows a spectacular extended and collimated spatial structure, with a projected length of 0.26 pc, a bent C-shaped morphology, multiple knots, and fragmented bow shocks at the apparent ends of the flow. The Hα image shows a bright halo with a clumpy distribution of material seen around the driving source, and curved reflection nebulosity tracing the outflow cavities. The driving source of HH 1165 is a Class I proto-brown dwarf, Mayrit 1701117 (M1701117), with a total (dust+gas) mass of ˜36 M Jup and a bolometric luminosity of ˜0.1 L ⊙. High-resolution VLT/UVES spectra of M1701117 show a wealth of emission lines indicative of strong outflow and accretion activity. SOAR/Goodman low-resolution spectra along the jet axis show an asymmetrical morphology for HH 1165. We find a puzzling picture wherein the northwest part exhibits a classical HH jet running into a pre-dominantly neutral medium, while the southern part resembles an externally irradiated jet. The C-shaped bending in HH 1165 may be produced by the combined effects from the massive stars in the ionization front to the east, the σ Orionis core to the west, and the close proximity to the B2-type star HR 1950. HH 1165 shows all of the signatures to be considered as a scaled-down version of parsec-length HH jets, and can be termed as the first sub-stellar analog of a protostellar HH jet system.
From proto-Kranz to C4 Kranz: building the bridge to C4 photosynthesis.
Sage, Rowan F; Khoshravesh, Roxana; Sage, Tammy L
2014-07-01
In this review, we examine how the specialized "Kranz" anatomy of C4 photosynthesis evolved from C3 ancestors. Kranz anatomy refers to the wreath-like structural traits that compartmentalize the biochemistry of C4 photosynthesis and enables the concentration of CO2 around Rubisco. A simplified version of Kranz anatomy is also present in the species that utilize C2 photosynthesis, where a photorespiratory glycine shuttle concentrates CO2 into an inner bundle-sheath-like compartment surrounding the vascular tissue. C2 Kranz is considered to be an intermediate stage in the evolutionary development of C4 Kranz, based on the intermediate branching position of C2 species in 14 evolutionary lineages of C4 photosynthesis. In the best-supported model of C4 evolution, Kranz anatomy in C2 species evolved from C3 ancestors with enlarged bundle sheath cells and high vein density. Four independent lineages have been identified where C3 sister species of C2 plants exhibit an increase in organelle numbers in the bundle sheath and enlarged bundle sheath cells. Notably, in all of these species, there is a pronounced shift of mitochondria to the inner bundle sheath wall, forming an incipient version of the C2 type of Kranz anatomy. This incipient version of C2 Kranz anatomy is termed proto-Kranz, and is proposed to scavenge photorespiratory CO2. By doing so, it may provide fitness benefits in hot environments, and thus represent a critical first stage of the evolution of both the C2 and C4 forms of Kranz anatomy. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.
NASA Astrophysics Data System (ADS)
Mernier, F.; de Plaa, J.; Pinto, C.; Kaastra, J. S.; Kosec, P.; Zhang, Y.-Y.; Mao, J.; Werner, N.
2016-08-01
The hot intra-cluster medium (ICM) is rich in metals, which are synthesised by supernovae (SNe) explosions and accumulate over time into the deep gravitational potential well of clusters of galaxies. Since most of the elements visible in X-rays are formed by type Ia (SNIa) and/or core-collapse (SNcc) supernovae, measuring their abundances gives us direct information on the nucleosynthesis products of billions of SNe since the epoch of the star formation peak (z ~ 2-3). In this study, we use the EPIC and RGS instruments on board XMM-Newton to measure the abundances of nine elements (O, Ne, Mg, Si, S, Ar, Ca, Fe, and Ni) from a sample of 44 nearby cool-core galaxy clusters, groups, and elliptical galaxies. We find that the Fe abundance shows a large scatter (~20-40%) over the sample, within 0.2r500 and especially 0.05r500. Unlike the absolute Fe abundance, the abundance ratios (X/Fe) are uniform over the considered temperature range (~0.6-8 keV) and with a limited scatter. In addition to an unprecedented treatment of systematic uncertainties, we provide the most accurate abundance ratios measured so far in the ICM, including Cr/Fe and Mn/Fe which we firmly detected (>4σ with MOS and pn independently). We find that Cr/Fe, Mn/Fe, and Ni/Fe differ significantly from the proto-solar values. However, the large uncertainties in the proto-solar abundances prevent us from making a robust comparison between the local and the intra-cluster chemical enrichments. We also note that, interestingly, and despite the large net exposure time (~4.5 Ms) of our dataset, no line emission feature is seen around ~3.5 keV.
Ranawade, Ayush Vasant; Cumbo, Philip; Gupta, Bhagwati P
2013-08-07
Chromatin modification genes play crucial roles in development and disease. In Caenorhabditis elegans, the class I histone deacetylase family member hda-1, a component of the nucleosome remodeling and deacetylation complex, has been shown to control cell proliferation. We recovered hda-1 in an RNA interference screen for genes involved in the morphogenesis of the egg-laying system. We found that hda-1 mutants have abnormal vulva morphology and vulval-uterine connections (i.e., no uterine-seam cell). We characterized the vulval defects by using cell fate-specific markers and found that hda-1 is necessary for the specification of all seven vulval cell types. The analysis of the vulval-uterine connection defect revealed that hda-1 is required for the differentiation of the gonadal anchor cell (AC), which in turn induces ventral uterine granddaughters to adopt π fates, leading to the formation of the uterine-seam cell. Consistent with these results, hda-1 is expressed in the vulva and AC. A search for hda-1 target genes revealed that fos-1 (fos proto-oncogene family) acts downstream of hda-1 in vulval cells, whereas egl-43 (evi1 proto-oncogene family) and nhr-67 (tailless homolog, NHR family) mediate hda-1 function in the AC. Furthermore, we showed that AC expression of hda-1 plays a crucial role in the regulation of the lin-12/Notch ligand lag-2 to specify π cell fates. These results demonstrate the pivotal role of hda-1 in the formation of the vulva and the vulval-uterine connection. Given that hda-1 homologs are conserved across the phyla, our findings are likely to provide a better understanding of HDAC1 function in development and disease.
Ranawade, Ayush Vasant; Cumbo, Philip; Gupta, Bhagwati P.
2013-01-01
Chromatin modification genes play crucial roles in development and disease. In Caenorhabditis elegans, the class I histone deacetylase family member hda-1, a component of the nucleosome remodeling and deacetylation complex, has been shown to control cell proliferation. We recovered hda-1 in an RNA interference screen for genes involved in the morphogenesis of the egg-laying system. We found that hda-1 mutants have abnormal vulva morphology and vulval-uterine connections (i.e., no uterine-seam cell). We characterized the vulval defects by using cell fate-specific markers and found that hda-1 is necessary for the specification of all seven vulval cell types. The analysis of the vulval-uterine connection defect revealed that hda-1 is required for the differentiation of the gonadal anchor cell (AC), which in turn induces ventral uterine granddaughters to adopt π fates, leading to the formation of the uterine-seam cell. Consistent with these results, hda-1 is expressed in the vulva and AC. A search for hda-1 target genes revealed that fos-1 (fos proto-oncogene family) acts downstream of hda-1 in vulval cells, whereas egl-43 (evi1 proto-oncogene family) and nhr-67 (tailless homolog, NHR family) mediate hda-1 function in the AC. Furthermore, we showed that AC expression of hda-1 plays a crucial role in the regulation of the lin-12/Notch ligand lag-2 to specify π cell fates. These results demonstrate the pivotal role of hda-1 in the formation of the vulva and the vulval-uterine connection. Given that hda-1 homologs are conserved across the phyla, our findings are likely to provide a better understanding of HDAC1 function in development and disease. PMID:23797102
First Large-scale Herbig–Haro Jet Driven by a Proto-brown Dwarf
DOE Office of Scientific and Technical Information (OSTI.GOV)
Riaz, B.; Briceño, C.; Heathcote, S.
2017-07-20
We report the discovery of a new Herbig–Haro jet, HH 1165, in SOAR narrow-band imaging of the vicinity of the σ Orionis cluster. HH 1165 shows a spectacular extended and collimated spatial structure, with a projected length of 0.26 pc, a bent C-shaped morphology, multiple knots, and fragmented bow shocks at the apparent ends of the flow. The H α image shows a bright halo with a clumpy distribution of material seen around the driving source, and curved reflection nebulosity tracing the outflow cavities. The driving source of HH 1165 is a Class I proto-brown dwarf, Mayrit 1701117 (M1701117), withmore » a total (dust+gas) mass of ∼36 M {sub Jup} and a bolometric luminosity of ∼0.1 L {sub ⊙}. High-resolution VLT/UVES spectra of M1701117 show a wealth of emission lines indicative of strong outflow and accretion activity. SOAR/Goodman low-resolution spectra along the jet axis show an asymmetrical morphology for HH 1165. We find a puzzling picture wherein the northwest part exhibits a classical HH jet running into a pre-dominantly neutral medium, while the southern part resembles an externally irradiated jet. The C-shaped bending in HH 1165 may be produced by the combined effects from the massive stars in the ionization front to the east, the σ Orionis core to the west, and the close proximity to the B2-type star HR 1950. HH 1165 shows all of the signatures to be considered as a scaled-down version of parsec-length HH jets, and can be termed as the first sub-stellar analog of a protostellar HH jet system.« less
Corley, B T; Carroll, R W; Hall, R M; Weatherall, M; Parry-Strong, A; Krebs, J D
2018-05-01
To establish whether the risk of hypoglycaemia is greater with 2 consecutive days of very-low-calorie diet compared with 2 non-consecutive days of very-low-calorie diet in people with Type 2 diabetes. This was a non-blinded randomized parallel group interventional trial of intermittent fasting in adults. The participants had a BMI of 30-45 kg/m 2 , Type 2 diabetes treated with metformin and/or hypoglycaemic medications and an HbA 1c concentration of 50-86 mmol/mol (6.7-10%). The participants followed a 2092-2510-kJ diet on 2 days per week for 12 weeks. A total of 41 participants were randomized 1:1 to consecutive (n=19) or non-consecutive (n=22) day fasts, of whom 37 (n=18 and n=19, respectively) were included in the final analysis. The primary outcome was difference in the rate of hypoglycaemia between the two study arms. Secondary outcomes included change in diet, quality of life, weight, lipid, glucose and HbA 1c levels, and liver function. The mean hypoglycaemia rate was 1.4 events over 12 weeks. Fasting increased the rate of hypoglycaemia despite medication reduction (RR 2.05, 95% CI 1.17 to 3.52). There was no difference between fasting on consecutive days and fasting on non-consecutive days (RR 1.54, 95% CI 0.35 to 6.11). Improvements in weight, HbA 1c , fasting glucose and quality of life were experienced by participants in both arms. In individuals with Type 2 diabetes on hypoglycaemic medications, fasting of any type increased the rate of hypoglycaemia. With education and medication reduction, fewer than expected hypoglycaemic events occurred. Although it was not possible to determine whether fasting on consecutive days increased the risk of hypoglycaemia, an acceptable rate was observed in both arms. © 2018 Diabetes UK.
Leeuw, T; Pette, D
1996-01-01
Skeletal muscle fibers are versatile entities, capable of changing their phenotype in response to altered functional demands. In the present study, fast-to-slow fiber type transitions were induced in rabbit tibialis anterior (fA) muscles by chronic low-frequency stimulation (CLFS). The time course of changes in relative protein concentrations of fast and slow myosin light chain (MLC) isoforms and changes in their relative synthesis rates by in vivo labeling with [35S]methionine were followed during stimulation periods of up to 60 days. Generally, relative synthesis rates and protein concentrations changed in parallel; i.e., fast isoforms decreased and slow isoforms increased. MLC3f, however, which turns over at a higher rate than the other light chains, exhibited a conspicuous discrepancy between a markedly reduced relative synthesis but only a moderate decrease in protein amount during the initial 2 weeks of CLFS. Apparently, MLC3f is regulated independent of MLC1f, with protein degradation playing an important role in its regulation. The exchange of fast MLC isoforms with their slow counterparts seemed to correspond to the ultimate fast-to-slow (MHCIIa-->MHCI) transition at the MHC level. However, due to an earlier onset of the fast-to-slow transition of the regulatory light chain and the delayed fast-to-slow exchange of the alkali light chains, a spectrum of hybrid isomyosins composed of fast and slow light and heavy chains must have existed transiently in transforming fibers. Such hybrid isomyosins appeared to be restricted to MHCIIa- and MHCI-based combinations. In conclusion, fiber type specific programs that normally coordinate the expression of myofibrillar protein isoforms seem to be maintained during fiber type transitions. Possible differences in post-transcriptional regulation may result in the transient accumulation of atypical combinations of fast and slow MLC and MHC isoforms, giving rise to the appearance of hybrid fibers under the conditions of forced fiber type conversion.
Kiyono, Kunihiko; Suzuki, Hiroshi I; Morishita, Yasuyuki; Komuro, Akiyoshi; Iwata, Caname; Yashiro, Masakazu; Hirakawa, Kosei; Kano, Mitsunobu R; Miyazono, Kohei
2009-10-01
c-Ski, originally identified as a proto-oncogene product, is an important negative regulator of transforming growth factor (TGF)-beta family signaling through interaction with Smad2, Smad3, and Smad4. High expression of c-Ski has been found in some cancers, including gastric cancer. We previously showed that disruption of TGF-beta signaling by dominant-negative TGF-beta type II receptor in a diffuse-type gastric carcinoma model accelerated tumor growth through induction of tumor angiogenesis by decreased expression of the anti-angiogenic factor thrombospondin (TSP)-1. Here, we examined the function of c-Ski in human diffuse-type gastric carcinoma OCUM-2MLN cells. Overexpression of c-Ski inhibited TGF-beta signaling in OCUM-2MLN cells. Interestingly, c-Ski overexpression resulted in extensive acceleration of the growth of subcutaneous xenografts in BALB/c nu/nu female mice (6 weeks of age). Similar to tumors expressing dominant-negative TGF-beta type II receptor, histochemical studies revealed less fibrosis and increased angiogenesis in xenografted tumors expressing c-Ski compared to control tumors. Induction of TSP-1 mRNA by TGF-beta was attenuated by c-Ski in vitro, and expression of TSP-1 mRNA was decreased in tumors expressing c-Ski in vivo. These findings suggest that c-Ski overexpression promotes the growth of diffuse-type gastric carcinoma through induction of angiogenesis.
Restoring integrity—A grounded theory of coping with a fast track surgery programme
Jørgensen, Lene Bastrup; Fridlund, Bengt
2016-01-01
Aims and objectives The aim of this study was to generate a theory conceptualizing and explaining behavioural processes involved in coping in order to identify the predominant coping types and coping type-specific features. Background Patients undergoing fast track procedures do not experience a higher risk of complications, readmission, or mortality. However, such programmes presuppose an increasing degree of patient involvement, placing high educational, physical, and mental demands on the patients. There is a lack of knowledge about how patients understand and cope with fast track programmes. Design The study design used classical grounded theory. Methods The study used a multimodal approach with qualitative and quantitative data sets from 14 patients. Results Four predominant types of coping, with distinct physiological, cognitive, affective, and psychosocial features, existed among patients going through a fast track total hip replacement programme. These patients’ main concern was to restore their physical and psychosocial integrity, which had been compromised by reduced function and mobility in daily life. To restore integrity they economized their mental resources, while striving to fulfil the expectations of the fast track programme. This goal was achieved by being mentally proactive and physically active. Three out of the four predominant types of coping matched the expectations expressed in the fast track programme. The non-matching behaviour was seen among the most nervous patients, who claimed the right to diverge from the programme. Conclusion In theory, four predominant types of coping with distinct physiological, cognitive, affective, and psychosocial features occur among patients going through a fast track total hip arthroplasty programme. PMID:26751199
Have sex or not? Lessons from bacteria.
Lodé, T
2012-01-01
Sex is one of the greatest puzzles in evolutionary biology. A true meiotic process occurs only in eukaryotes, while in bacteria, gene transcription is fragmentary, so asexual reproduction in this case really means clonal reproduction. Sex could stem from a signal that leads to increased reproductive output of all interacting individuals and could be understood as a secondary consequence of primitive metabolic reactions. Meiotic sex evolved in proto-eukaryotes to solve a problem that bacteria did not have, namely a large amount of DNA material, occurring in an archaic step of proto-cell formation and genetic exchanges. Rather than providing selective advantages through reproduction, sex could be thought of as a series of separate events which combines step-by-step some very weak benefits of recombination, meiosis, gametogenesis and syngamy. Copyright © 2012 S. Karger AG, Basel.
Mars primordial crust: unique sites for investigating proto-biologic properties.
Perry, Randall S; Hartmann, William K
2006-12-01
The Martian meteorite collection suggests that intact outcrops or boulder-scale fragments of the 4.5 Ga Martian crust exist within tens of meters of the present day surface of Mars. Mars may be the only planet where such primordial crust samples, representing the first 100 Ma of a planet's environment, are available. The primordial crust has been destroyed on Earth by plate tectonics and other geological phenomena and is buried on the Moon under hundreds or thousands of meters of megaregoltih. Early Mars appears to have been remarkably similar to early Earth, and samples of rock from the first few Ma or first 100 Ma may reveal "missing link" proto-biological forms that could shed light on the transition from abiotic organic chemistry to living cells. Such organic snapshots of nascent life are unlikely to be found on Earth.
Ledger, Paul M; Miras, Yannick; Poux, Matthieu; Milcent, Pierre Yves
2015-01-01
Early human societies and their interactions with the natural world have been extensively explored in palaeoenvironmental studies across Central and Western Europe. Yet, despite an extensive body of scholarship, there is little consideration of the environmental impacts of proto-historic urbanisation. Typically palaeoenvironmental studies of Bronze and Iron Age societies discuss human impact in terms of woodland clearance, landscape openness and evidence for agriculture. Although these features are clearly key indicators of human settlement, and characterise Neolithic and early to Middle Bronze Age impacts at Corent, they do not appear to represent defining features of a protohistoric urban environment. The Late Iron Age Gallic Oppidum of Corent is remarkable for the paucity of evidence for agriculture and strong representation of apophytes associated with disturbance. Increased floristic diversity - a phenomenon also observed in more recent urban environments - was also noted. The same, although somewhat more pronounced, patterns are noted for the Late Bronze Age and hint at the possibility of a nascent urban area. High percentages of pollen from non-native trees such as Platanus, Castanea and Juglans in the late Bronze Age and Gallic period also suggest trade and cultural exchange, notably with the Mediterranean world. Indeed, these findings question the validity of applying Castanea and Juglans as absolute chronological markers of Romanisation. These results clearly indicate the value of local-scale palaeoecological studies and their potential for tracing the phases in the emergence of a proto-historic urban environment.
Taraseviciute, Agne; Vincent, Benjamin T.; Schedin, Pepper; Jones, Peter Lloyd
2010-01-01
Remodeling of the stromal extracellular matrix and elevated expression of specific proto-oncogenes within the adjacent epithelium represent cardinal features of breast cancer, yet how these events become integrated is not fully understood. To address this question, we focused on tenascin-C (TN-C), a stromal extracellular matrix glycoprotein whose expression increases with disease severity. Initially, nonmalignant human mammary epithelial cells (MCF-10A) were cultured within a reconstituted basement membrane (BM) where they formed three-dimensional (3-D) polarized, growth-attenuated, multicellular acini, enveloped by a continuous endogenous BM. In the presence of TN-C, however, acini failed to generate a normal BM, and net epithelial cell proliferation increased. To quantify how TN-C alters 3-D tissue architecture and function, we developed a computational image analysis algorithm, which showed that although TN-C disrupted acinar surface structure, it had no effect on their volume. Thus, TN-C promoted epithelial cell proliferation leading to luminal filling, a process that we hypothesized involved c-met, a proto-oncogene amplified in breast tumors that promotes intraluminal filling. Indeed, TN-C increased epithelial c-met expression and promoted luminal filling, whereas blockade of c-met function reversed this phenotype, resulting in normal BM deposition, proper lumen formation, and decreased cell proliferation. Collectively, these studies, combining a novel quantitative image analysis tool with 3-D organotypic cultures, demonstrate that stromal changes associated with breast cancer can control proto-oncogene function. PMID:20042668
NASA Technical Reports Server (NTRS)
Hong, Jaesub; Allen, Branden; Grindlay, Jonathan; Barthelmy, Scott D.
2016-01-01
Wide-field (greater than or approximately equal to 100 degrees squared) hard X-ray coded-aperture telescopes with high angular resolution (greater than or approximately equal to 2 minutes) will enable a wide range of time domain astrophysics. For instance, transient sources such as gamma-ray bursts can be precisely localized without the assistance of secondary focusing X-ray telescopes to enable rapid followup studies. On the other hand, high angular resolution in coded-aperture imaging introduces a new challenge in handling the systematic uncertainty: the average photon count per pixel is often too small to establish a proper background pattern or model the systematic uncertainty in a timescale where the model remains invariant. We introduce two new techniques to improve detection sensitivity, which are designed for, but not limited to, a high-resolution coded-aperture system: a self-background modeling scheme which utilizes continuous scan or dithering operations, and a Poisson-statistics based probabilistic approach to evaluate the significance of source detection without subtraction in handling the background. We illustrate these new imaging analysis techniques in high resolution coded-aperture telescope using the data acquired by the wide-field hard X-ray telescope ProtoEXIST2 during a high-altitude balloon flight in fall 2012. We review the imaging sensitivity of ProtoEXIST2 during the flight, and demonstrate the performance of the new techniques using our balloon flight data in comparison with a simulated ideal Poisson background.
NASA Astrophysics Data System (ADS)
Krot, Alexander M.
2008-09-01
The statistical theory for a cosmological body forming (so-called the spheroidal body model) has been proposed in [1]-[9]. Within the framework of this theory, bodies have fuzzy outlines and are represented by means of spheroidal forms [1],[2]. In the work [3], it has been investigated a slowly evolving in time process of a gravitational compression of a spheroidal body close to an unstable equilibrium state. In the papers [4],[5], the equation of motion of particles inside the weakly gravitating spheroidal body modeled by means of an ideal liquid has been obtained. Using Schwarzschild's and Kerr's metrics a consistency of the proposed statistical model with the general relativity has been shown in [6]. The proposed theory follows from the conception for forming a spheroidal body from protoplanetary nebula [7],[8]; it permits to derive the form of distribution functions for an immovable [1]-[5] and rotating spheroidal body [6]-[8] as well as their density masses and also the distribution function of specific angular momentum of the rotating uniformly spheroidal body [7],[8]. It is well-known there is not a statistical equilibrium in a gas-dust proto-planetary cloud because of long relaxation time for proto-planets formation in own gravitational field. This proto-planetary system behavior can be described by Jeans' equation in partial derivations relative to a distribution function [9]. The problem for finding a general solution of Jeans' equation is connected directly with an analytical expression for potential of gravitational field. Thus, the determination of gravitational potential is the main problem of statistical dynamics for proto-planetary system [9]. This work shows this task of proto-planetary dynamics can be solved on the basis of spheroidal bodies theory. The proposed theory permits to derive the form of gravitational potential for a rotating spheroidal body at a long distance from its center. Using the obtained analytical expression for potential of gravitational field, the gravitational strength (as well as angular momentum space function) in a remote zone of a slowly gravitational compressed rotating spheroidal body is obtained. As a result, a distribution function describing mechanical state of proto-planetary system can be found from the Jeans' equation. References: [1] Krot AM. The statistical model of gravitational interaction of particles. Uspekhi Sovremennoï Radioelektroniki (special issue "Cosmic Radiophysics", Moscow) 1996; 8: 66-81 (in Russian). [2] Krot AM. Use of the statistical model of gravity for analysis of nonhomogeneity in earth surface. Proc. SPIE's 13th Annual Intern. Symposium "AeroSense", Orlando, Florida, USA, April 5-9, 1999; 3710: 1248-1259. [3] Krot AM. Statistical description of gravitational field: a new approach. Proc. SPIE's 14th Annual Intern.Symposium "AeroSense", Orlando, Florida, USA, April 24-28, 2000; 4038: 1318-1329. [4] Krot AM. Gravidynamical equations for a weakly gravitating spheroidal body. Proc. SPIE's 15th Annual Intern. Symposium "AeroSense", Orlando, Florida, USA, April 16-20, 2001; 4394: 1271-1282. [5] Krot AM. Development of gravidynamical equations for a weakly gravitating body in the vicinity of absolute zero temperature. Proc. 53rd Intern. Astronautical Congress (IAC) - The 2nd World Space Congress-2002, Houston, Texas, USA, October 10-19, 2002; Preprint IAC-02-J.P.01: 1-11. [6] Krot AM. The statistical model of rotating and gravitating spheroidal body with the point of view of general relativity. Proc. 35th COSPAR Scientific Assembly, Paris, France, July 18-25, 2004; Abstract-Nr. COSPAR 04-A- 00162. [7] Krot A. The statistical approach to exploring formation of Solar system. Proc. European Geoscinces Union (EGU) General Assembly, Vienna, Austria, April 02-07, 2006; Geophysical Research Abstracts, vol. 8: EGU06-A- 00216, SRef-ID: 1607-7962/gra/. [8] Krot AM. The statistical model of original and evolution planets of Solar system and planetary satellities. Proc. European Planetary Science Congress, Berlin, Germany, September 18-22, 2006; Planetary Research Abstracts, ESPC2006-A-00014. [9] Krot A. On the principal difficulties and ways to their solution in the theory of gravitational condensation of infinitely distributed dust substance. Proc. XXIV IUGG General Assembly, Perugia, Italy, July 2-13, 2007; GS002 Symposium "Gravity Field", Abstract GS002-3598: 143-144.
Hydrogen Financial Analysis Scenario Tool (H2FAST); NREL (National Renewable Energy Laboratory)
DOE Office of Scientific and Technical Information (OSTI.GOV)
Melaina, Marc
This presentation describes the Hydrogen Financial Analysis Scenario Tool, H2FAST, and provides an overview of each of the three H2FAST formats: the H2FAST web tool, the H2FAST Excel spreadsheet, and the H2FAST Business Case Scenario (BCS) tool. Examples are presented to illustrate the types of questions that H2FAST can help answer.
Human skeletal muscle: transition between fast and slow fibre types.
Neunhäuserer, Daniel; Zebedin, Michaela; Obermoser, Magdalena; Moser, Gerhard; Tauber, Mark; Niebauer, Josef; Resch, Herbert; Galler, Stefan
2011-05-01
Human skeletal muscles consist of different fibre types: slow fibres (slow twitch or type I) containing the myosin heavy chain isoform (MHC)-I and fast fibres (fast twitch or type II) containing MHC-IIa (type IIA) or MHC-IId (type IID). The following order of decreasing kinetics is known: type IID > type IIA > type I. This order is especially based on the kinetics of stretch activation, which is the most discriminative property among fibre types. In this study we tested if hybrid fibres containing both MHC-IIa and MHC-I (type C fibres) provide a transition in kinetics between fast (type IIA) and slow fibres (type I). Our data of stretch activation kinetics suggest that type C fibres, with different ratios of MHC-IIa and MHC-I, do not provide a continuous transition. Instead, a specialized group of slow fibres, which we called "transition fibres", seems to provide a transition. Apart of their kinetics of stretch activation, which is most close to that of type IIA, the transition fibres are characterized by large cross-sectional areas and low maximal tensions. The molecular cause for the mechanical properties of the transition fibres is unknown. It is possible that the transition fibres contain an unknown slow MHC isoform, which cannot be separated by biochemical methods. Alternatively, or in addition, isoforms of myofibrillar proteins, other than MHC, and posttranslational modifications of myofibrillar proteins could play a role regarding the characteristics of the transition fibres.
Wu, Jiahui; Liang, Zhu; Zhou, Jingwen; Zhong, Chongke; Jiang, Wei; Zhang, Yonghong; Zhang, Shaoyan
2016-12-01
To examine the associations between elevated levels of C-reactive protein (CRP), soluble intercellular adhesion molecule-1 (sICAM-1) and soluble E-selectin (sE-selectin) with fasting and 2-hour postload glucometabolic status among Inner Mongolians in China. Based on a cross-sectional survey of patients during 2003, 2260 participants were reinvestigated between 2013 and 2014. We categorized the participants into 3 subgroups according to fasting and postload glucose levels, respectively. The associations between biomarkers of inflammation and endothelial dysfunction and deterioration of fasting and postload glucometabolic status were examined by ordinal logistic regression analysis. We found 142 and 49 persons who had impaired fasting glucose (IFG) levels and type 2 diabetes in the fasting state and 335 and 50 persons who had impaired glucose tolerance (IGT) and type 2 diabetes in the postload state. After multivariable adjustment, elevated CRP and sICAM-1 levels were associated with deterioration of fasting glucometabolic status from normal fasting glucose to IFG and type 2 diabetes (odds ratio [OR] 1.73 [95% CI 1.18 to 2.54] for elevated CRP levels, OR 1.86 [95% CI 1.30 to 2.66] for elevated sICAM-1 levels). Elevated sE-selectin levels were associated with deterioration of postload glucometabolic status from normal glucose tolerance to IGT and type 2 diabetes (OR 1.34 [95% CI 1.01 to 1.77]) in the multivariable-adjusted model. Biomarkers of inflammation and endothelial dysfunction were separately associated with fasting and postload glucose metabolism among Inner Mongolians. Copyright © 2016 Canadian Diabetes Association. Published by Elsevier Inc. All rights reserved.
NASA Astrophysics Data System (ADS)
Zheng, Zhen; Chen, Yan-Jing; Deng, Xiao-Hua; Yue, Su-Wei; Chen, Hong-Jin; Wang, Qing-Fei
2018-01-01
The Qiman Tagh of the East Kunlun Orogen, NW China, lies within the Tethysides and hosts a large W-Sn belt associated with the Bashierxi monzogranite. To constrain the origin of the granitic magmatism and its relationship with W-Sn mineralization and the tectonic evolution of the East Kunlun Orogen and the Tethys, we present zircon U-Pb ages and Hf isotopic data, and whole-rock compositional and Sr-Nd-Pb isotopic data of the Bashierxi monzogranite. The granite comprises quartz, K-feldspar, plagioclase, and minor muscovite, tourmaline, biotite, and garnet. It contains high concentrations of SiO2, K2O, and Al2O3, and low concentrations of TiO2 and MgO, indicating a peraluminous high-K calc-alkaline affinity. The rocks are enriched in Rb, U, Pb, and light rare earth elements, and relatively depleted in Eu, Ba, Nb, Sr, P, and Ti, and are classified as S-type granites. Twenty zircon grains yield a weighted mean 238U/206Pb age of 432 ± 2.6 Ma (mean square weighted deviation = 1.3), indicating the occurrence of a middle Silurian magmatic event in the region. Magmatic zircons yield εHf(t) values of -6.7 to 0.7 and corresponding two-stage Hf model ages of 1663-1250 Ma, suggesting that the granite was derived from Mesoproterozoic crust, as also indicated by 207Pb/206Pb ages of 1621-1609 Ma obtained from inherited zircon cores. The inherited zircon cores yield εHf(t) values of 8.3-9.6, which indicate the generation of juvenile crust in the late Paleoproterozoic. Samples of the Bashierxi granite yield high initial 87Sr/86Sr ratios and radiogenic Pb concentrations, and negative εNd(t) values. Isotopic data from the Bashierxi granite indicate that it was derived from partial melting of ancient (early Paleozoic to Mesoproterozoic) sediments, possibly representing recycled Proterozoic juvenile crust. Middle Silurian granitic magmatism resulted from continental collision following closure of the Proto-Tethys Ocean. The Qiman Tagh represents a Caledonian orogenic belt containing S-type granites and associated W-Sn deposits.
Desert Research and Technology Studies 2005 Report
NASA Technical Reports Server (NTRS)
Ross, Amy J.; Kosmo, Joseph J.; Janoiko, Barbara A.; Bernard, Craig; Splawn, Keith; Eppler, Dean B.
2006-01-01
During the first two weeks of September 2005, the National Aeronautics and Space Administration (NASA) Johnson Space Center (JSC) Advanced Extravehicular Activity (AEVA) team led the field test portion of the 2005 Research and Technology Studies (RATS). The Desert RATS field test activity is the culmination of the various individual science and advanced engineering discipline areas year-long technology and operations development efforts into a coordinated field test demonstration under representative (analog) planetary surface terrain conditions. The purpose of the RATS is to drive out preliminary exploration concept of operations EVA system requirements by providing hands-on experience with simulated planetary surface exploration extravehicular activity (EVA) hardware and procedures. The RATS activities also are of significant importance in helping to develop the necessary levels of technical skills and experience for the next generation of engineers, scientists, technicians, and astronauts who will be responsible for realizing the goals of the Constellation Program. The 2005 Desert RATS was the eighth RATS field test and was the most systems-oriented, integrated field test to date with participants from NASA field centers, the United States Geologic Survey (USGS), industry partners, and research institutes. Each week of the test, the 2005 RATS addressed specific sets of objectives. The first week focused on the performance of surface science astro-biological sampling operations, including planetary protection considerations and procedures. The second week supported evaluation of the Science, Crew, Operations, and Utility Testbed (SCOUT) proto-type rover and its sub-systems. Throughout the duration of the field test, the Communications, Avionics, and Infomatics pack (CAI-pack) was tested. This year the CAI-pack served to provide information on surface navigation, science sample collection procedures, and EVA timeline awareness. Additionally, 2005 was the first year since the Apollo program that two pressurized suited test subjects have worked together simultaneously. Another first was the demonstration of recharge of cryogenic life support systems while in-use by the suited test subjects. The recharge capability allowed the simulated EVA test duration to be doubled, facilitating SCOUT proto-type rover testing. This paper summarizes Desert RATS 2005 test hardware, detailed test objectives, test operations and test results.
Analysis of Spontaneous and Nerve-Evoked Calcium Transients in Intact Extraocular Muscles in Vitro
Feng, Cheng-Yuan; Hennig, Grant W.; Corrigan, Robert D.; Smith, Terence K.; von Bartheld, Christopher S.
2012-01-01
Extraocular muscles (EOMs) have unique calcium handling properties, yet little is known about the dynamics of calcium events underlying ultrafast and tonic contractions in myofibers of intact EOMs. Superior oblique EOMs of juvenile chickens were dissected with their nerve attached, maintained in oxygenated Krebs buffer, and loaded with fluo-4. Spontaneous and nerve stimulation-evoked calcium transients were recorded and, following calcium imaging, some EOMs were double-labeled with rhodamine-conjugated alpha-bungarotoxin (rhBTX) to identify EOM myofiber types. EOMs showed two main types of spontaneous calcium transients, one slow type (calcium waves with 1/2max duration of 2–12 s, velocity of 25–50 μm/s) and two fast “flash-like” types (Type 1, 30–90 ms; Type 2, 90–150 ms 1/2max duration). Single pulse nerve stimulation evoked fast calcium transients identical to the fast (Type 1) calcium transients. Calcium waves were accompanied by a local myofiber contraction that followed the calcium transient wavefront. The magnitude of calcium-wave induced myofiber contraction far exceeded those of movement induced by nerve stimulation and associated fast calcium transients. Tetrodotoxin eliminated nerve-evoked transients, but not spontaneous transients. Alpha-bungarotoxin eliminated both spontaneous and nerve-evoked fast calcium transients, but not calcium waves, and caffeine increased wave activity. Calcium waves were observed in myofibers lacking spontaneous or evoked fast transients, suggestive of multiply-innervated myofibers, and this was confirmed by double-labeling with rhBTX. We propose that the abundant spontaneous calcium transients and calcium waves with localized contractions that do not depend on innervation may contribute to intrinsic generation of tonic functions of EOMs. PMID:22579493
Diabetic emergencies including hypoglycemia during Ramadan
Ahmad, Jamal; Pathan, Md Faruque; Jaleel, Mohammed Abdul; Fathima, Farah Naaz; Raza, Syed Abbas; Khan, A. K. Azad; Ishtiaq, Osama; Sheikh, Aisha
2012-01-01
Majority of physicians are of the opinion that Ramadan fasting is acceptable for well-balanced type 2 patients conscious of their disease and compliant with their diet and drug intake. Fasting during Ramadan for patients with diabetes carries a risk of an assortment of complications. Islamic rules allow patients not to fast. However, if patient with diabetes wish to fast, it is necessary to advice them to undertake regular monitoring of blood glucose levels several times a day, to reduce the risk of hypoglycemia during day time fasting or hyperglycemia during the night. Patient with type 1 diabetes who fast during Ramadan may be better managed with fast-acting insulin. They should have basic knowledge of carbohydrate metabolism, the standard principles of diabetes care, and pharmacology of various antidiabetic drugs. This Consensus Statement describes the management of the various diabetic emergencies that may occur during Ramadan. PMID:22837906
Migration of accreting giant planets
NASA Astrophysics Data System (ADS)
Crida, A.; Bitsch, B.; Raibaldi, A.
2016-12-01
We present the results of 2D hydro simulations of giant planets in proto-planetary discs, which accrete gas at a more or less high rate. First, starting from a solid core of 20 Earth masses, we show that as soon as the runaway accretion of gas turns on, the planet is saved from type I migration : the gap opening mass is reached before the planet is lost into its host star. Furthermore, gas accretion helps opening the gap in low mass discs. Consequently, if the accretion rate is limited to the disc supply, then the planet is already inside a gap and in type II migration. We further show that the type II migration of a Jupiter mass planet actually depends on its accretion rate. Only when the accretion is high do we retrieve the classical picture where no gas crosses the gap and the planet follows the disc spreading. These results impact our understanding of planet migration and planet population synthesis models. The e-poster presenting these results in French can be found here: L'e-poster présentant ces résultats en français est disponible à cette adresse: http://sf2a.eu/semaine-sf2a/2016/posterpdfs/156_179_49.pdf.
Graham, A.; Cozadd, D.; Areces-Mallea, A.; Frederiksen, N.O.
2000-01-01
An assemblage of 46 fossil pollen and spore types is described from a core drilled through the middle Eocene Saramaguacan Formation, Camaguey Province, eastern Cuba. Many of the specimens represent unidentified or extinct taxa but several can be identified to family (Palmae, Bombacaceae, Gramineae, Moraceae, Myrtaceae) and some to genus (Pteris, Crudia, Lymingtonia?). The paleo-climate was warm-temperate to subtropical which is consistent with other floras in the region of comparable age and with the global paleotemperature curve. Older plate tectonic models show a variety of locations for proto-Cuba during Late Cretaceous and later times, including along the norther coast of South America. More recent models depict western and central Cuba as two separate parts until the Eocene, and eastern Cuba (joined to northern Hispaniola) docking to central Cuba also in the Eocene. All fragments are part of the North American Plate and none were directly connected with northern South America in late Mesozoic or Cenozoic time. The Saramaguacan flora supports this model because the assemblage is distinctly North American in affinities, with only one type (Retimonocolpites type 1) found elsewhere only in South America.
Sahin, S B; Ayaz, T; Ozyurt, N; Ilkkilic, K; Kirvar, A; Sezgin, H
2013-10-01
Millions of Muslims fast from dawn until dusk during the annual Islamic holy month of Ramadan. Most of the studies evaluating biochemical changes in diabetic patients during Ramadan showed little changes in the glycemic control. In this study, our aim was to assess the impact of fasting during Ramadan on glycemic control in patients with type 2 diabetes. We examined 122 patients with type 2 diabetes (82 female, 40 male, age 56.93 ± 9.57 years) before and after the Ramadan. 66.4% of the patients were treated with oral antidiabetic (OAD) alone, 6.5% with a combination of insulin plus OAD and 19.7% with insulin alone. 88 of 122 patients fasted during Ramadan (26.98 ± 5.93 days). Weight, body mass index (BMI), waist circumference, blood pressure, fasting plasma glucose (FPG), postprandial glucose (PPG), fructosamine, HbA1c, fasting insulin and lipid parameters were measured. The frequencies of both severe hyperglycemia and hypoglycemia were higher in the fasting group, but the difference was not significant (p=0.18). Weight, BMI, waist circumference, blood pressure, FPG (143.38 ± 52.04 vs. 139.31 ± 43.47 mg/dl) PPG (213.40 ± 98.56 vs. 215.66+109.31 mg/dl), fructosamine (314.18 ± 75.40 vs. 314.49 ± 68.36 µmol/l), HbA1c (6.33 ± 0.98 vs. 6.22 ± 0.92%) and fasting insulin (12.61 ± 8.94 vs. 10.51 ± 6.26 µU/ml) were unchanged in patients who fasted during Ramadan. Microalbuminuria significantly decreased during Ramadan (132.85 ± 197.11 vs. 45.03 ± 73.11 mg/dl). In this study, we concluded that fasting during Ramadan did not worsen the glycemic control of patients with type 2 diabetes. © J. A. Barth Verlag in Georg Thieme Verlag KG Stuttgart · New York.
Nagpal, Sajan Jiv Singh; Bamlet, William R; Kudva, Yogish C; Chari, Suresh T
2018-05-17
Human pancreatic polypeptide (HPP) is a hormone secreted by the ventral pancreas. While postprandial HPP levels have been studied in chronic pancreatitis (CP) and pancreatic ductal adenocarcinoma (PDAC), there are limited data on fasting HPP in these diseases. Fasting serum HPP was measured in the following groups of patients: CP with diabetes mellitus (DM) (n = 16), CP without DM (n = 34), PDAC with new-onset DM (n = 50), PDAC without DM (n = 49), new-onset type 2 DM (n = 50), and controls without DM (n = 49). Sixty-six had type 3c DM (CP with DM, n = 16; PDAC with new-onset DM, n = 50). Median fasting HPP levels (in picograms per milliliter) were similar among all groups. Median (interquartile range) HPP levels in new-onset type 2 DM (n = 50; 288.3 [80.1-1072.1]) were similar to those in type 3c DM (n = 66; 242.3 [64.9-890.9]) (P = 0.71). In PDAC (n = 99), HPP values were similar in pancreatic head (n = 75) versus body/tail (n = 24) tumors (245.3 [64.3-1091.3] vs 334.7 [136.1-841.5]; P = 0.95), regardless of DM. Fasting HPP levels are similar in CP, PDAC, and controls regardless of glycemic status.
Barg, Frances K.; Long, Judith A.
2010-01-01
To identify promoters of and barriers to fruit, vegetable, and fast-food consumption, we interviewed low-income African Americans in Philadelphia. Salient promoters and barriers were distinct from each other and differed by food type: taste was a promoter and cost a barrier to all foods; convenience, cravings, and preferences promoted consumption of fast foods; health concerns promoted consumption of fruits and vegetables and avoidance of fast foods. Promoters and barriers differed by gender and age. Strategies for dietary change should consider food type, gender, and age. PMID:20167885
Type 2 diabetes patient's perspective on Ramadan fasting: a qualitative study.
Lee, Jun Yang; Wong, Chee Piau; Tan, Christina San San; Nasir, Nazrila Hairizan; Lee, Shaun Wen Huey
2017-01-01
We evaluated the beliefs, experience and diabetes management strategies of type 2 diabetes mellitus (T2DM) Muslim patients that chose to fast during Ramadan. A semistructured focus group interview was conducted with 53 participants with T2DM. Participants were purposefully sampled and asked to share their perspective on Ramadan fasting. All interviews were audio recorded, transcribed verbatim and analyzed thematically. Participants reported optimism towards fasting during Ramadan, as they believed that fasting was beneficial to their overall well-being, and a time for family bonding. Most participants made limited attempts to discuss with their doctors on the decision to fast and self-adjusted their medication based on experience and symptoms during this period. They also reported difficulty in managing their diet, due to fear of hypoglycemia and the collective social aspect of fasting. Muslims are optimistic about their well-being when fasting during Ramadan. Many choose to fulfill their religious obligation despite being discouraged by their doctors. Collaboration with religious authorities should be explored to ensure patients receive adequate education before fasting during Ramadan. NCT02189135; Results.
Attractors of relaxation discrete-time systems with chaotic dynamics on a fast time scale.
Maslennikov, Oleg V; Nekorkin, Vladimir I
2016-07-01
In this work, a new type of relaxation systems is considered. Their prominent feature is that they comprise two distinct epochs, one is slow regular motion and another is fast chaotic motion. Unlike traditionally studied slow-fast systems that have smooth manifolds of slow motions in the phase space and fast trajectories between them, in this new type one observes, apart the same geometric objects, areas of transient chaos. Alternating periods of slow regular motions and fast chaotic ones as well as transitions between them result in a specific chaotic attractor with chaos on a fast time scale. We formulate basic properties of such attractors in the framework of discrete-time systems and consider several examples. Finally, we provide an important application of such systems, the neuronal electrical activity in the form of chaotic spike-burst oscillations.
Collaborative Scheduling Using JMS in a Mixed Java and .NET Environment
NASA Technical Reports Server (NTRS)
Wang, Yeou-Fang; Wax, Allan; Lam, Ray; Baldwin, John; Borden, Chet
2006-01-01
A collaborative framework/environment was proto-typed to prove the feasibility of scheduling space flight missions on NASA's Deep Space Network (DSN) in a distributed fashion. In this environment, effective collaboration relies on efficient communications among all flight mission and DSN scheduling users. There-fore, messaging becomes critical to timely event notification and data synchronization. In the prototype, a rapid messaging system using Java Message Service (JMS) in a mixed Java and .NET environment is established. This scheme allows both Java and .NET applications to communicate with each other for data synchronization and schedule negotiation. The JMS approach we used is based on a centralized messaging scheme. With proper use of a high speed messaging system, all users in this collaborative framework can communicate with each other to generate a schedule collaboratively to meet DSN and projects tracking needs.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Kenny, Paraic A.; Bissell, Mina J.
2005-06-15
The ability to proliferate independently of signals from other cell types is a fundamental characteristic of tumor cells. Using a 3D culture model of human breast cancer progression, we have delineated a protease-dependent autocrine loop which provides an oncogenic stimulus in the absence of proto-oncogene mutation. Inhibition of this protease, TACE/ADAM17, reverts the malignant phenotype by preventing mobilization of two crucial growth factors, Amphiregulin and TGF{alpha}. We show further that the efficacy of EGFR inhibitors is overcome by physiological levels of growth factors and that successful EGFR inhibition is dependent on reducing ligand bioavailability. Using existing patient outcome data, wemore » demonstrate a strong correlation between TACE and TGF{alpha} expression in human breast cancers that is predictive of poor prognosis.« less
Tests of New NIRS Compact ECR Ion Source for Carbon Therapy
NASA Astrophysics Data System (ADS)
Muramatsu, M.; Kitagawa, A.; Sakamoto, Y.; Sato, S.; Sato, Y.; Ogawa, Hirotsugu; Yamada, S.; Ogawa, Hiroyuki; Yoshida, Y.; Drentje, A. G.
2005-03-01
Ion sources for medical facilities should have characteristics of easy maintenance, low electric power, good stability and long operation time without maintenance (one year or more). Based on the performance of the proto type compact source, a 10 GHz compact ECR ion source with all permanent magnets has been developed. Peak values of the mirror magnetic field along the beam axis are 0.59 T at the extraction side and 0.87 T at the gas injection side, respectively, while the minimum B strength is 0.25 T. The source has a diameter of 320 mm and a length of 295 mm. The result of beam tests showed that a C4+ intensity of 530 μA was obtained under an extraction voltage of 40 kV. This paper describes the experimental results for the new source.
75 FR 52367 - Notice of Inventory Completion: Memphis Pink Palace Museum, Memphis, TN
Federal Register 2010, 2011, 2012, 2013, 2014
2010-08-25
... the Nodena, Parkin and Walls Phases of the Late Mississippian and proto-historic periods (A.D. 1350... culturally affiliated with the cultural assemblages fround on archeological sites related to Nodena, Parkin...
ANALYZING BIOSOLIDS FOR FECAL COLIFORM AND SALMONELLAE
Current federal regulations required monitoring for fecal coliforms or Salmonella in biosolids destined for land application. Standard protocols designed to quantify these organisms in water or wastewater were identified and specified in these regulations. However, proto...
Nebula-based Primordial Atmospheres of Planets Around Solar-Like Stars Revised
NASA Astrophysics Data System (ADS)
Scherf, Manuel; Lammer, H.; Leitzinger, M.; Odert, P.; Güdel, M.; Hanslmeier, A.
2012-05-01
At the beginning of a planetary system, in the stage of the stellar nebula and the growing-phase of the planets, planetesimals and Earth-like proto-planets accumulate a remarkable amount of gas, mainly consisting of hydrogen and helium. The mass of such a primordial atmosphere was first estimated for the proto-Earth by Hayashi et al. (1979), with up to 1026 g accumulated within 106 years. Furthermore it is commonly expected that these primordial atmospheres will be completely dissipated due to irradiation of the stellar EUV-flux during the first 108 years. Recent observations of young solar-like stars indicate that the efficiency and effect of the EUV-flux after the nebula disappeared, was highly overestimated by previous studies. We show that parts of these dense hydrogen/helium-gas envelopes may sustain this early active stage of a young star. Implications on the habitability are also discussed.
ALMA observation of high-z extreme star-forming environments discovered by Planck/Herschel
NASA Astrophysics Data System (ADS)
Kneissl, R.
2015-05-01
The Comic Microwave Background satellite Planck with its High Frequency Instrument has surveyed the mm/sub-mm sky in six frequency channels from 100 to 900 GHz. A sample of 228 cold sources of the Cosmic Infrared Background was observed in follow-up with Herschel SPIRE. The majority of sources appear to be over-densities of star-forming galaxies matching the size of high-z proto-cluster regions, while a 3% fraction are individual bright, lensed galaxies. A large observing program is underway with the aim of resolving the regions into the constituent members of the Planck sources. First ALMA data have been received on one Planck/Herschel proto-cluster candidate, showing the expected large over-abundance of bright mm/sub-mm sources within the cluster region. ALMA long baseline data of the brightest lensed galaxy in the sample with > 1 Jy at 350 μm are also forthcoming.
A proto-architecture for innate directionally selective visual maps.
Adams, Samantha V; Harris, Chris M
2014-01-01
Self-organizing artificial neural networks are a popular tool for studying visual system development, in particular the cortical feature maps present in real systems that represent properties such as ocular dominance (OD), orientation-selectivity (OR) and direction selectivity (DS). They are also potentially useful in artificial systems, for example robotics, where the ability to extract and learn features from the environment in an unsupervised way is important. In this computational study we explore a DS map that is already latent in a simple artificial network. This latent selectivity arises purely from the cortical architecture without any explicit coding for DS and prior to any self-organising process facilitated by spontaneous activity or training. We find DS maps with local patchy regions that exhibit features similar to maps derived experimentally and from previous modeling studies. We explore the consequences of changes to the afferent and lateral connectivity to establish the key features of this proto-architecture that support DS.
Role of Molecular Biology in Cancer Treatment: A Review Article.
Imran, Aman; Qamar, Hafiza Yasara; Ali, Qurban; Naeem, Hafsa; Riaz, Mariam; Amin, Saima; Kanwal, Naila; Ali, Fawad; Sabar, Muhammad Farooq; Nasir, Idrees Ahmad
2017-11-01
Cancer is a genetic disease and mainly arises due to a number of reasons include activation of onco-genes, malfunction of tumor suppressor genes or mutagenesis due to external factors. This article was written from the data collected from PubMed, Nature, Science Direct, Springer and Elsevier groups of journals. Oncogenes are deregulated form of normal proto-oncogenes required for cell division, differentiation and regulation. The conversion of proto-oncogene to oncogene is caused due to translocation, rearrangement of chromosomes or mutation in gene due to addition, deletion, duplication or viral infection. These oncogenes are targeted by drugs or RNAi system to prevent proliferation of cancerous cells. There have been developed different techniques of molecular biology used to diagnose and treat cancer, including retroviral therapy, silencing of oncogenes and mutations in tumor suppressor genes. Among all the techniques used, RNAi, zinc finger nucleases and CRISPR hold a brighter future towards creating a Cancer Free World.
Darido, Charbel; Georgy, Smitha R; Wilanowski, Tomasz; Dworkin, Sebastian; Auden, Alana; Zhao, Quan; Rank, Gerhard; Srivastava, Seema; Finlay, Moira J; Papenfuss, Anthony T; Pandolfi, Pier Paolo; Pearson, Richard B; Jane, Stephen M
2011-11-15
Despite its prevalence, the molecular basis of squamous cell carcinoma (SCC) remains poorly understood. Here, we identify the developmental transcription factor Grhl3 as a potent tumor suppressor of SCC in mice, and demonstrate that targeting of Grhl3 by a miR-21-dependent proto-oncogenic network underpins SCC in humans. Deletion of Grhl3 in adult epidermis evokes loss of expression of PTEN, a direct GRHL3 target, resulting in aggressive SCC induced by activation of PI3K/AKT/mTOR signaling. Restoration of Pten expression completely abrogates SCC formation. Reduced levels of GRHL3 and PTEN are evident in human skin, and head and neck SCC, associated with increased expression of miR-21, which targets both tumor suppressors. Our data define the GRHL3-PTEN axis as a critical tumor suppressor pathway in SCC. 2011 Elsevier Inc. All rights reserved.
Kawabata, Fuminori; Mizushige, Takafumi; Uozumi, Keisuke; Hayamizu, Kohsuke; Han, Li; Tsuji, Tomoko; Kishida, Taro
2015-01-01
In our previous study, fish protein was proven to reduce serum lipids and body fat accumulation by skeletal muscle hypertrophy and enhancing basal energy expenditure in rats. In the present study, we examined the precise effects of fish protein intake on different skeletal muscle fiber types and metabolic gene expression of the muscle. Fish protein increased fast-twitch muscle weight, reduced liver triglycerides and serum glucose levels, compared with the casein diet after 6 or 8 weeks of feeding. Furthermore, fish protein upregulated the gene expressions of a fast-twitch muscle-type marker and a glucose transporter in the muscle. These results suggest that fish protein induces fast-muscle hypertrophy, and the enhancement of basal energy expenditure by muscle hypertrophy and the increase in muscle glucose uptake reduced liver lipids and serum glucose levels. The present results also imply that fish protein intake causes a slow-to-fast shift in muscle fiber type.
Jensen, Majken K; Bartz, Traci M; Djoussé, Luc; Kizer, Jorge R; Zieman, Susan J; Rimm, Eric B; Siscovick, David S; Psaty, Bruce M; Ix, Joachim H; Mukamal, Kenneth J
2013-10-01
Fetuin-A levels are associated with higher risk of type 2 diabetes, but it is unknown if the association is causal. We investigated common (>5%) genetic variants in the fetuin-A gene (AHSG) fetuin-A levels, fasting glucose, and risk of type 2 diabetes. Genetic variation, fetuin-A levels, and fasting glucose were assessed in 2,893 Caucasian and 542 African American community-living individuals 65 years of age or older in 1992-1993. Common AHSG variants (rs4917 and rs2248690) were strongly associated with fetuin-A concentrations (P<0.0001). In analyses of 259 incident cases of type 2 diabetes, the single nucleotide polymorphisms (SNPs) were not associated with diabetes risk during follow-up and similar null associations were observed when 579 prevalent cases were included. As expected, higher fetuin-A levels were associated with higher fasting glucose concentrations (1.9 mg/dL [95% CI, 1.2-2.7] higher per SD in Caucasians), but Mendelian randomization analyses using both SNPs as unbiased proxies for measured fetuin-A did not support an association between genetically predicted fetuin-A levels and fasting glucose (-0.3 mg/dL [95% CI, -1.9 to 1.3] lower per SD in Caucasians). The difference between the associations of fasting glucose with actual and genetically predicted fetuin-A level was statistically significant (P=0.001). Results among the smaller sample of African Americans trended in similar directions but were statistically insignificant. Common variants in the AHSG gene are strongly associated with plasma fetuin-A concentrations, but not with risk of type 2 diabetes or glucose concentrations, raising the possibility that the association between fetuin-A and type 2 diabetes may not be causal.
Characteristics of shock-associated fast-drift kilometric radio bursts
NASA Technical Reports Server (NTRS)
Macdowall, R. J.; Kundu, M. R.; Stone, R. G.
1987-01-01
The existence of a class of fast-drift, shock-associated (SA), kilometric radio bursts which occur at the time of metric type II emission and which are not entirely the kilometric continuation of metric type III bursts has been reported previously (Cane et al., 1981). In this paper unambiguous SA event criteria are established for the purpose of statistically comparing SA events with conventional kilometric type III bursts. Applying these criteria to all long-duration, fast-drift bursts observed by the ISEE-3 spacecraft during a 28-month interval, it is found that more than 70 percent of the events satisfying the criteria are associated with the radio signatures of coronal shocks. If a given event is associated with a metric type II or type IV burst, it is 13 times more likely to satisfy the SA criteria than an event associated only with metric type III activity.
Fast packet switch architectures for broadband integrated services digital networks
NASA Technical Reports Server (NTRS)
Tobagi, Fouad A.
1990-01-01
Background information on networking and switching is provided, and the various architectures that have been considered for fast packet switches are described. The focus is solely on switches designed to be implemented electronically. A set of definitions and a brief description of the functionality required of fast packet switches are given. Three basic types of packet switches are identified: the shared-memory, shared-medium, and space-division types. Each of these is described, and examples are given.
NASA Technical Reports Server (NTRS)
Ku, Jentung; Ottenstein, Laura
2011-01-01
This paper describes thermal vacuum testing of a proto-flight miniature loop heat pipe (MLHP) with two evaporators and two condensers designed for future small systems applications requiring low mass, low power and compactness. Each evaporator contains a wick with an outer diameter of 6.35 mm, and each has its own integral compensation chamber (CC). Miniaturization of the loop components reduces the volume and mass of the thermal system. Multiple evaporators provide flexibility for placement of instruments that need to be maintained at the same temperature, and facilitate heat load sharing among instruments, reducing the auxiliary heater power requirement. A flow regulator is used to regulate heat dissipations between the two condensers, allowing flexible placement of radiators on the spacecraft. A thermoelectric converter (TEC) is attached to each CC for control of the operating temperature and enhancement of start-up success. Tests performed include start-up, power cycle, sink temperature cycle, high power and low power operation, heat load sharing, and operating temperature control. The proto-flight MLHP demonstrated excellent performance in the thermal vacuum test. The loop started successfully and operated stably under various evaporator heat loads and condenser sink temperatures. The TECs were able to maintain the loop operating temperature within b1K of the desired set point temperature at all power levels and all sink temperatures. The un-powered evaporator would automatically share heat from the other powered evaporator. The flow regulator was able to regulate the heat dissipation among the radiators and prevent vapor from flowing into the liquid line.
Pattison, Jillian M.; Wright, Jason B.; Cole, Michael D.
2015-01-01
The majority of the genome consists of intergenic and non-coding DNA sequences shown to play a major role in different gene regulatory networks. However, the specific potency of these distal elements as well as how these regions exert function across large genomic distances remains unclear. To address these unresolved issues, we closely examined the chromatin architecture around proto-oncogenic loci in the mouse and human genomes to demonstrate a functional role for chromatin looping in distal gene regulation. Using cell culture models, we show that tumorigenic retroviral integration sites within the mouse genome occur near existing large chromatin loops and that this chromatin architecture is maintained within the human genome as well. Significantly, as mutagenesis screens are not feasible in humans, we demonstrate a way to leverage existing screens in mice to identify disease relevant human enhancers and expose novel disease mechanisms. For instance, we characterize the epigenetic landscape upstream of the human Cyclin D1 locus to find multiple distal interactions that contribute to the complex cis-regulation of this cell cycle gene. Furthermore, we characterize a novel distal interaction upstream of the Cyclin D1 gene which provides mechanistic evidence for the abundant overexpression of Cyclin D1 occurring in multiple myeloma cells harboring a pathogenic translocation event. Through use of mapped retroviral integrations and translocation breakpoints, our studies highlight the importance of chromatin looping in oncogene expression, elucidate the epigenetic mechanisms crucial for distal cis-regulation, and in one particular instance, explain how a translocation event drives tumorigenesis through upregulation of a proto-oncogene. PMID:25799187
Ledger, Paul M.; Miras, Yannick; Poux, Matthieu; Milcent, Pierre Yves
2015-01-01
Early human societies and their interactions with the natural world have been extensively explored in palaeoenvironmental studies across Central and Western Europe. Yet, despite an extensive body of scholarship, there is little consideration of the environmental impacts of proto-historic urbanisation. Typically palaeoenvironmental studies of Bronze and Iron Age societies discuss human impact in terms of woodland clearance, landscape openness and evidence for agriculture. Although these features are clearly key indicators of human settlement, and characterise Neolithic and early to Middle Bronze Age impacts at Corent, they do not appear to represent defining features of a protohistoric urban environment. The Late Iron Age Gallic Oppidum of Corent is remarkable for the paucity of evidence for agriculture and strong representation of apophytes associated with disturbance. Increased floristic diversity – a phenomenon also observed in more recent urban environments – was also noted. The same, although somewhat more pronounced, patterns are noted for the Late Bronze Age and hint at the possibility of a nascent urban area. High percentages of pollen from non-native trees such as Platanus, Castanea and Juglans in the late Bronze Age and Gallic period also suggest trade and cultural exchange, notably with the Mediterranean world. Indeed, these findings question the validity of applying Castanea and Juglans as absolute chronological markers of Romanisation. These results clearly indicate the value of local-scale palaeoecological studies and their potential for tracing the phases in the emergence of a proto-historic urban environment. PMID:25853251
Digital drug safety surveillance: monitoring pharmaceutical products in twitter.
Freifeld, Clark C; Brownstein, John S; Menone, Christopher M; Bao, Wenjie; Filice, Ross; Kass-Hout, Taha; Dasgupta, Nabarun
2014-05-01
Traditional adverse event (AE) reporting systems have been slow in adapting to online AE reporting from patients, relying instead on gatekeepers, such as clinicians and drug safety groups, to verify each potential event. In the meantime, increasing numbers of patients have turned to social media to share their experiences with drugs, medical devices, and vaccines. The aim of the study was to evaluate the level of concordance between Twitter posts mentioning AE-like reactions and spontaneous reports received by a regulatory agency. We collected public English-language Twitter posts mentioning 23 medical products from 1 November 2012 through 31 May 2013. Data were filtered using a semi-automated process to identify posts with resemblance to AEs (Proto-AEs). A dictionary was developed to translate Internet vernacular to a standardized regulatory ontology for analysis (MedDRA(®)). Aggregated frequency of identified product-event pairs was then compared with data from the public FDA Adverse Event Reporting System (FAERS) by System Organ Class (SOC). Of the 6.9 million Twitter posts collected, 4,401 Proto-AEs were identified out of 60,000 examined. Automated, dictionary-based symptom classification had 86 % recall and 72 % precision [corrected]. Similar overall distribution profiles were observed, with Spearman rank correlation rho of 0.75 (p < 0.0001) between Proto-AEs reported in Twitter and FAERS by SOC. Patients reporting AEs on Twitter showed a range of sophistication when describing their experience. Despite the public availability of these data, their appropriate role in pharmacovigilance has not been established. Additional work is needed to improve data acquisition and automation.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Takeda, T.; Shimazu, Y.; Hibi, K.
2012-07-01
Under the R and D project to improve the modeling accuracy for the design of fast breeder reactors the authors are developing a neutronics calculation method for designing a large commercial type sodium- cooled fast reactor. The calculation method is established by taking into account the special features of the reactor such as the use of annular fuel pellet, inner duct tube in large fuel assemblies, large core. The Verification and Validation, and Uncertainty Qualification (V and V and UQ) of the calculation method is being performed by using measured data from the prototype FBR Monju. The results of thismore » project will be used in the design and analysis of the commercial type demonstration FBR, known as the Japanese Sodium fast Reactor (JSFR). (authors)« less
Shen, L Y; Luo, J; Lei, H G; Jiang, Y Z; Bai, L; Li, M Z; Tang, G Q; Li, X W; Zhang, S H; Zhu, L
2015-11-13
The myosin heavy chain (MyHC) composition, glycolytic potential, mitochondrial content, and gene expression related to energy metabolism were analyzed in eight muscles from Tibetan pigs, to study how meat quality develops in different muscle tissues. The muscles were classified into three clusters, based on MyHC composition: masseter, trapezius, and latissimus dorsi as 'slow-oxidative-type'; psoas major and semimembranosus as 'intermediate-type'; and longissimus dorsi, obliquus externus abdominis, and semitendinosus as 'fast-glycolytic-type'. The 'slow-oxidative-type' muscles had the highest MyHC I and MyHC IIA content (P < 0.01); 'intermediate-type' muscles, the highest MyHC IIx content (P < 0.01); and 'fast-glycolytic-type' muscles, the highest MyHC IIb content (P < 0.01). The pH values measured in 'slow-oxidative-type' muscles were higher than those in the other clusters were; however, the color of 'fast-glycolytic-type' muscles was palest (P < 0.01). Mitochondrial content increased in the order: fast-glycolytic-type < intermediate-type < slow-oxidative-type. In the 'slow-oxidative-type' muscles, the expression levels of genes related to ATP synthesis were higher, but were lower for those related to glycogen synthesis and glycolysis. Mitochondrial content was significantly positively correlated with MyHC I content, but negatively correlated with MyHC IIb content. MyHC I and mitochondrial content were both negatively correlated with glycolytic potential. Overall, muscles used frequently in exercise had a higher proportion of type I fibers. 'Slow-oxidative-type' muscles, rich in type I fibers with higher mitochondrial and lower glycogen and glucose contents, had a higher ATP synthesis efficiency and lower glycolytic capacity, which contributed to their superior meat quality.
NASA Astrophysics Data System (ADS)
Sasaki, S.
In the solar nebula, a growing planet attracts ambient gas to form a solar-type atmosphere. The structure of this H2-He atmosphere is calculated assuming the Earth was formed in the nebula. The blanketing effect of the atmosphere renders the planetary surface molten when the planetary mass exceeds 0.2 ME (ME being the present Earth's mass). Reduction of the surface melt by atmospheric H2 should add a large amount of H2O to the atmosphere: under the quartz-iron-fayalite oxygen buffer, partial pressure ratio P(H2O)/P(H2) becomes higher than 0.1. Enhancing opacity and gas mean molecular weight, the excess H2O raises the temperature and renders the atmosphere in convective equilibrium, while the dissociation of H2 suppresses the adiabatic temperature gradient. The surface temperature of the proto-Earth can be as high as 4700K when its mass is 1 ME. Such a high temperature may accelerate the evaporation of surface materials. A deep totally-molten magma ocean should exist in the accretion Earth.
PROTOCOL FOR LABORATORY TESTING OF CRUDE-OIL BIOREMEDIATION PRODUCTS IN FRESHWATER CONDITIONS
In 1993, the Environmental Protection Agency, National Risk Management Research Laboratory (EPA, NRMRL), with the National Environmental Technology Application Center (NETAC), developed a protocol for evaluation of bioremediation products in marine environments. The marine proto...
Preverbal Particles in Pingelapese: A Language of Micronesia
ERIC Educational Resources Information Center
Hattori, Ryoko
2012-01-01
This dissertation presents a synchronic and diachronic study of Pingelapese pronouns and auxiliary verbs--"ae", "e", "aen", and "en". Synchronically, Pingelapese employs subject pronominal clitics, not subject agreement markers, unlike Proto-Micronesian and many other contemporary Micronesian languages.…
Attractors of relaxation discrete-time systems with chaotic dynamics on a fast time scale
DOE Office of Scientific and Technical Information (OSTI.GOV)
Maslennikov, Oleg V.; Nekorkin, Vladimir I.
In this work, a new type of relaxation systems is considered. Their prominent feature is that they comprise two distinct epochs, one is slow regular motion and another is fast chaotic motion. Unlike traditionally studied slow-fast systems that have smooth manifolds of slow motions in the phase space and fast trajectories between them, in this new type one observes, apart the same geometric objects, areas of transient chaos. Alternating periods of slow regular motions and fast chaotic ones as well as transitions between them result in a specific chaotic attractor with chaos on a fast time scale. We formulate basicmore » properties of such attractors in the framework of discrete-time systems and consider several examples. Finally, we provide an important application of such systems, the neuronal electrical activity in the form of chaotic spike-burst oscillations.« less
NASA Astrophysics Data System (ADS)
Herman, S. W.; Gans, P. B.
2006-12-01
A paleomagnetic investigation into possible vertical axis rotations has been conducted in the Sierra el Aguaje and Sierra Tinajas del Carmen, Sonora, Mexico, in order assess proposed styles for oblique continental rifting in the Gulf of California. Two styles of rifting have been proposed; (1) strain partitioning (Stock and Hodges, 89), and (2) transtension (Gans, 97), for the Proto-Gulf period of the Gulf of California. The presence of large- scale vertical axis rotations would lend weight to the argument for transtension. The Sierra el Aguaje and Sierra Tinajas del Carmen are located in southwestern coastal Sonora, Mexico. The ranges represent the eastern-rifted margin of the central Gulf of California. This is one of the few areas of that margin which is entirely above water, with new ocean crust of the Guaymas basin lying immediately offshore of the western edge of the ranges. The ranges are composed of volcanic units and their corresponding volcaniclastic units that are the result of persistent magmatic activity between 20 and 8.8 Ma, including three packages of basalt and andesite that make excellent paleomagnetic recorders. Based on cross cutting relations and geochronologic data for pre-, syn-, and post-tectonic volcanic units, most of the faulting and tilting in the Sierra El Aguaje and Sierra Tinajas del Carmen is bracketed between 11.9 and 9.0 Ma, thus falling entirely within Proto-Gulf time. Existing field relations suggest the presence of large (>45°) vertical axis rotations in this region. This evidence includes: a) abrupt changes in the strike of tilted strata in different parts of the range b) ubiquitous NE-SW striking faults with left lateral-normal oblique slip, that terminate against major NW-trending right lateral faults, and c) obliquity between the general strike of tilted strata and the strike of faults. The results of the paleomagnetic investigation are consistent with the field evidence and show large clockwise rotations between ~30° and ~100° with no discernable translation. Such large-scale rotations lend credence to the theory that the area inboard of Baja California was experiencing transtension during the Proto-Gulf period, rather than the pure extension that would have been the result of strain partitioning.
NASA Astrophysics Data System (ADS)
Lallemand, Serge
2016-12-01
We compiled the most relevant data acquired throughout the Philippine Sea Plate (PSP) from the early expeditions to the most recent. We also analyzed the various explanatory models in light of this updated dataset. The following main conclusions are discussed in this study. (1) The Izanagi slab detachment beneath the East Asia margin around 60-55 Ma likely triggered the Oki-Daito plume occurrence, Mesozoic proto-PSP splitting, shortening and then failure across the paleo-transform boundary between the proto-PSP and the Pacific Plate, Izu-Bonin-Mariana subduction initiation and ultimately PSP inception. (2) The initial splitting phase of the composite proto-PSP under the plume influence at ˜54-48 Ma led to the formation of the long-lived West Philippine Basin and short-lived oceanic basins, part of whose crust has been ambiguously called "fore-arc basalts" (FABs). (3) Shortening across the paleo-transform boundary evolved into thrusting within the Pacific Plate at ˜52-50 Ma, allowing it to subduct beneath the newly formed PSP, which was composed of an alternance of thick Mesozoic terranes and thin oceanic lithosphere. (4) The first magmas rising from the shallow mantle corner, after being hydrated by the subducting Pacific crust beneath the young oceanic crust near the upper plate spreading centers at ˜49-48 Ma were boninites. Both the so-called FABs and the boninites formed at a significant distance from the incipient trench, not in a fore-arc position as previously claimed. The magmas erupted for 15 m.y. in some places, probably near the intersections between back-arc spreading centers and the arc. (5) As the Pacific crust reached greater depths and the oceanic basins cooled and thickened at ˜44-45 Ma, the composition of the lavas evolved into high-Mg andesites and then arc tholeiites and calc-alkaline andesites. (6) Tectonic erosion processes removed about 150-200 km of frontal margin during the Neogene, consuming most or all of the Pacific ophiolite initially accreted to the PSP. The result was exposure of the FABs, boninites, and early volcanics that are near the trench today. (7) Serpentinite mud volcanoes observed in the Mariana fore-arc may have formed above the remnants of the paleo-transform boundary between the proto-PSP and the Pacific Plate.
NASA Astrophysics Data System (ADS)
Meresse, F.; Savva, D.; Pubellier, M.; Steuer, S.; Franke, D.; Cordey, F.; Muller, C.; Sapin, F.; Mouly, B.; Auxiètre, J.-L.
2012-04-01
The elongated island of Palawan, bounded by two marginal basins, the South China Sea to the North and the Sulu Sea to the South is composed of remnants of an inverted basin (Proto-South China Sea) thrusted onto the margin of a continental terrane which rifted away from the Chinese-Vietnamese margin. Based on field observations coupled with seismic and drill-holes data, our study focuses on the structural architecture of the island in order to decipher the geodynamic evolution of the southern margin of the South China Sea. Structurally, the Palawan Island consists of: (i) the Palawan wedge, which extends towards the South China Sea is composed of deformed slope to deep ocean deposits of Cretaceous (north Palawan) to Tertiary (central and south Palawan) ages. This accretionnary wedge is characterized by small wavelength folds of mainly NE-SW trend. Offshore, the unconformable Middle-Late Miocene Tabon limestones unit postdates the last stages of the Palawan wedge growth/setting; (ii) On top of this wedge lie thrust slices of ophiolite bodies comprising ribbon cherts of Albian age as indicated by radiolarians.; these bodies are likely to be relicts of the now-subducted Proto South China Sea; (iii) The central and southern parts of the Palawan island are characterized by a large wavelength antiform of NE-SW trend. This structure is sealed by the slightly tilted Early Pliocene marls unit; (iv) The island also presents necking zones bordered by N-S trending transform faults. This area witnessed the geodynamic evolution of the South East Asia which consists of a succession of opening/closure of oceanic basins and block accretions. The Palawan Island therefore results of the closing of the Proto-South China Sea which once formed both the Palawan accretionary wedge and the overlying ophiolite tectonic slices. During a later compressive event, the rifted continental margin which composes the basement of the Island was inverted, inducing the uplift and the large scale folding of the Palawan Island. In a final stage, the strain relaxing results in the formation of the necking zones, probably reactivating the inherited transform faults of the Proto-South China Sea. Keywords: Palawan Island; South China Sea; oceanic basin; inverted margin; Ophiolite.
The effects of long term fasting in Ramadan on glucose regulation in type 2 diabetes mellitus.
Karatoprak, C; Yolbas, S; Cakirca, M; Cinar, A; Zorlu, M; Kiskac, M; Cikrikcioglu, M A; Erkoc, R; Tasan, E
2013-09-01
For Ramadan fasting, observing Muslims do not eat or drink between sunrise and sunset during Ramadan, Islam's holy month of the year according to the lunar calendar. In 2011, fasting patients with diabetes fasted for an average of 16.5 hours per day, having 2 meals between sunset and sunrise for a month. We aimed to evaluate the impact of extended fasting on glucose regulation and observe possible complications of extended fasting in type 2 diabetes mellitus patients. We conducted a randomized, retrospective, observational study. Patients who presented at the Diabetes Clinic during the 15 days before and after Ramadan in August 2011 Istanbul, whose hemoglobin A1c, fasting plasma glucose, postprandial plasma glucose, weight and height value examinations and follow-up were completed were included in the study. Seventy-six diabetes patients who fasted during Ramadan (fasting group) and 71 patients with diabetes who did not fast (non-fasting group) were included in the study. These two groups with similar demographic characteristics were compared before and after Ramadan. HbA1c, fasting and postprandial plasma glucose, body mass index, weight and adverse events were evaluated. No statistically significant difference was observed among the fasting and the non-fasting groups. There was no difference between the pre and post-Ramadan values of the fasting group. We could not find any negative effects of extended fasting on glucose regulation of patients with diabetes who are using certain medications. No serious adverse event was observed. We failed to demonstrate benefits of increasing the number of meals in patients with diabetes.
Building fast well-balanced two-stage numerical schemes for a model of two-phase flows
NASA Astrophysics Data System (ADS)
Thanh, Mai Duc
2014-06-01
We present a set of well-balanced two-stage schemes for an isentropic model of two-phase flows arisen from the modeling of deflagration-to-detonation transition in granular materials. The first stage is to absorb the source term in nonconservative form into equilibria. Then in the second stage, these equilibria will be composed into a numerical flux formed by using a convex combination of the numerical flux of a stable Lax-Friedrichs-type scheme and the one of a higher-order Richtmyer-type scheme. Numerical schemes constructed in such a way are expected to get the interesting property: they are fast and stable. Tests show that the method works out until the parameter takes on the value CFL, and so any value of the parameter between zero and this value is expected to work as well. All the schemes in this family are shown to capture stationary waves and preserves the positivity of the volume fractions. The special values of the parameter 0,1/2,1/(1+CFL), and CFL in this family define the Lax-Friedrichs-type, FAST1, FAST2, and FAST3 schemes, respectively. These schemes are shown to give a desirable accuracy. The errors and the CPU time of these schemes and the Roe-type scheme are calculated and compared. The constructed schemes are shown to be well-balanced and faster than the Roe-type scheme.
Faust, Thomas W.; Assous, Maxime; Shah, Fulva; Tepper, James M.; Koós, Tibor
2015-01-01
Previous work suggests that neostriatal cholinergic interneurons control the activity of several classes of GABAergic interneurons through fast nicotinic receptor mediated synaptic inputs. Although indirect evidence has suggested the existence of several classes of interneurons controlled by this mechanism only one such cell type, the neuropeptide-Y expressing neurogliaform neuron, has been identified to date. Here we tested the hypothesis that in addition to the neurogliaform neurons that elicit slow GABAergic inhibitory responses, another interneuron type exists in the striatum that receives strong nicotinic cholinergic input and elicits conventional fast GABAergic synaptic responses in projection neurons. We obtained in vitro slice recordings from double transgenic mice in which Channelrhodopsin-2 was natively expressed in cholinergic neurons and a population of serotonin receptor-3a-Cre expressing GABAergic interneurons were visualized with tdTomato. We show that among the targeted GABAergic interneurons a novel type of interneuron, termed the fast-adapting interneuron, can be identified that is distinct from previously known interneurons based on immunocytochemical and electrophysiological criteria. We show using optogenetic activation of cholinergic inputs that fast-adapting interneurons receive a powerful supra-threshold nicotinic cholinergic input in vitro. Moreover, fast adapting neurons are densely connected to projection neurons and elicit fast, GABAA receptor mediated inhibitory postsynaptic responses. The nicotinic receptor mediated activation of fast-adapting interneurons may constitute an important mechanism through which cholinergic interneurons control the activity of projection neurons and perhaps the plasticity of their synaptic inputs when animals encounter reinforcing or otherwise salient stimuli. PMID:25865337
Type 2 diabetes patient’s perspective on Ramadan fasting: a qualitative study
Lee, Jun Yang; Wong, Chee Piau; Tan, Christina San San; Nasir, Nazrila Hairizan
2017-01-01
Objective We evaluated the beliefs, experience and diabetes management strategies of type 2 diabetes mellitus (T2DM) Muslim patients that chose to fast during Ramadan. Research design and methods A semistructured focus group interview was conducted with 53 participants with T2DM. Participants were purposefully sampled and asked to share their perspective on Ramadan fasting. All interviews were audio recorded, transcribed verbatim and analyzed thematically. Results Participants reported optimism towards fasting during Ramadan, as they believed that fasting was beneficial to their overall well-being, and a time for family bonding. Most participants made limited attempts to discuss with their doctors on the decision to fast and self-adjusted their medication based on experience and symptoms during this period. They also reported difficulty in managing their diet, due to fear of hypoglycemia and the collective social aspect of fasting. Conclusion Muslims are optimistic about their well-being when fasting during Ramadan. Many choose to fulfill their religious obligation despite being discouraged by their doctors. Collaboration with religious authorities should be explored to ensure patients receive adequate education before fasting during Ramadan. Trial registration number NCT02189135; Results. PMID:28761651
Examining a Bidirectional Association Between Depressive Symptoms and Diabetes
Golden, Sherita Hill; Lazo, Mariana; Carnethon, Mercedes; Bertoni, Alain G.; Schreiner, Pamela J.; Roux, Ana V. Diez; Lee, Hochang Benjamin; Lyketsos, Constantine
2008-01-01
Context Depressive symptoms are associated with development of type 2 diabetes, but it is unclear whether type 2 diabetes is a risk factor for elevated depressive symptoms. Objective To examine the bidirectional association between depressive symptoms and type 2 diabetes. Design, Setting, and Participants Multi-Ethnic Study of Atherosclerosis, a longitudinal, ethnically diverse cohort study of US men and women aged 45 to 84 years enrolled in 2000-2002 and followed up until 2004-2005. Main Outcome Measures Elevated depressive symptoms defined by Center for Epidemiologic Studies Depression Scale (CES-D) score of 16 or higher, use of antidepressant medications, or both. The CES-D score was also modeled continuously. Participants were categorized as normal fasting glucose (<100 mg/dL), impaired fasting glucose (100-125 mg/dL), or type 2 diabetes (≥126 mg/dL or receiving treatment). Analysis 1 included 5201 participants without type 2 diabetes at baseline and estimated the relative hazard of incidenttype2diabetesover3.2yearsforthosewithandwithoutdepressivesymptoms.Analysis 2 included 4847 participants without depressive symptoms at baseline and calculated the relative odds of developing depressive symptoms over 3.1 years for those with and without type 2 diabetes. Results In analysis 1, the incidence rate of type 2 diabetes was 22.0 and 16.6 per 1000 person-years for those with and without elevated depressive symptoms, respectively. The risk of incident type 2 diabetes was 1.10 times higher for each 5-unit increment in CES-D score (95% confidence interval [CI], 1.02-1.19) after adjustment for demographic factors and body mass index. This association persisted following adjustment for metabolic, inflammatory, socioeconomic, or lifestyle factors, although it was no longer statistically significant following adjustment for the latter (relative hazard, 1.08; 95% CI, 0.99-1.19). In analysis 2, the incidence rates of elevated depressive symptoms per 1000-person years were 36.8 for participants with normal fasting glucose; 27.9 for impaired fasting glucose; 31.2 for untreated type 2 diabetes, and 61.9 for treated type 2 diabetes. Compared with normal fasting glucose, the demographic–adjusted odds ratios of developing elevated depressive symptoms were 0.79 (95% CI, 0.63-0.99) for impaired fasting glucose, 0.75 (95% CI, 0.44-1.27) for untreated type 2 diabetes, and 1.54 (95% CI, 1.13-2.09) for treated type 2 diabetes. None of these associations with incident depressive symptoms were materially altered with adjustment for body mass index, socioeconomic and lifestyle factors, and comorbidities. Findings in both analyses were comparable across ethnic groups. Conclusions A modest association of baseline depressive symptoms with incident type 2 diabetes existed that was partially explained by lifestyle factors. Impaired fasting glucose and untreated type 2 diabetes were inversely associated with incident depressive symptoms, whereas treated type 2 diabetes showed a positive association with depressive symptoms. These associations were not substantively affected by adjustment for potential confounding or mediating factors. PMID:18560002
IRAS 23385 & 6053: A Prototype Massive Class O Object
NASA Technical Reports Server (NTRS)
Molinari, S.; Testi, L.; Brand, J.; Cesaroni, R.; Palla, F.
1998-01-01
The last few years have seen a rapid growth in observations aimed at identifying intermediate and high-mass star forming sites in a wide range of evolutionary stages ranging from Hot Cores to ultracompact regions, to proto-Ae/Be stars.
Problem-Solving Test: Southwestern Blotting
ERIC Educational Resources Information Center
Szeberényi, József
2014-01-01
Terms to be familiar with before you start to solve the test: Southern blotting, Western blotting, restriction endonucleases, agarose gel electrophoresis, nitrocellulose filter, molecular hybridization, polyacrylamide gel electrophoresis, proto-oncogene, c-abl, Src-homology domains, tyrosine protein kinase, nuclear localization signal, cDNA,…
Simulation for Wind Turbine Generators -- With FAST and MATLAB-Simulink Modules
DOE Office of Scientific and Technical Information (OSTI.GOV)
Singh, M.; Muljadi, E.; Jonkman, J.
This report presents the work done to develop generator and gearbox models in the Matrix Laboratory (MATLAB) environment and couple them to the National Renewable Energy Laboratory's Fatigue, Aerodynamics, Structures, and Turbulence (FAST) program. The goal of this project was to interface the superior aerodynamic and mechanical models of FAST to the excellent electrical generator models found in various Simulink libraries and applications. The scope was limited to Type 1, Type 2, and Type 3 generators and fairly basic gear-train models. Future work will include models of Type 4 generators and more-advanced gear-train models with increased degrees of freedom. Asmore » described in this study, implementation of the developed drivetrain model enables the software tool to be used in many ways. Several case studies are presented as examples of the many types of studies that can be performed using this tool.« less
Hyperglycemia and type 2 diabetes among Filipino women in the Philippines, Hawaii, and San Diego.
Araneta, Maria Rosario G; Morton, Deborah J; Lantion-Ang, Lina; Grandinetti, Andrew; Lim-Abrahan, Mary Anne; Chang, Healani; Barrett-Connor, Elizabeth; Rodriguez, Beatrice L; Wingard, Deborah L
2006-03-01
Diabetes risk increases as immigrant populations adopt western lifestyles. We compared the prevalence of fasting hyperglycemia among Filipino women aged 40-79 years in the Philippines, Hawaii, and San Diego. Data were obtained from the (1) Philippine National Nutrition Survey (1998), (2) Native Hawaiian Health Research Project (1997-2001), and (3) University of California San Diego Filipino Women's Health Study (1995-1999). Fasting glucose after an 8h fast, blood pressure, and body mass index (BMI) were measured in all three regions; a 75 g oral glucose tolerance test was performed in San Diego and Hawaii. The proportion of Filipinas with BMI > or = 30 kg/m2 was higher in Hawaii (20%) compared to women in San Diego (9.3%) or the Philippines (5.2%, p<0.001). Fasting hyperglycemia prevalence (fasting plasma glucose > or = 126 mg/dl or fasting whole blood glucose > or = 110 mg/dl) did not differ among Filipinas in the Philippines (11.8%), San Diego (14.1%), and Hawaii (14.7%, p = 0.323). Type 2 diabetes prevalence was similar among Filipinas in San Diego (31.6%) and Hawaii (24.9%, p = 0.79). Despite regional differences in obesity, fasting hyperglycemia was similar among Filipinas in the Philippines, San Diego, and Hawaii and type 2 diabetes prevalence was similar among Filipinas in San Diego and Hawaii.
Sandberg, C.A.; Morrow, J.R.; Poole, F.G.; Ziegler, W.
2003-01-01
The classic type section of the Devils Gate Limestone at Devils Gate Pass is situated on the eastern slope of a proto-Antler forebulge that resulted from convergence of the west side of the North American continent with an ocean plate. The original Late Devonian forebulge, the site of which is now located between Devils Gate Pass and the Northern Antelope Range, separated the continental-rise to deep-slope Woodruff basin on the west from the backbulge Pilot basin on the east. Two connections between these basins are recorded by deeper water siltstone beds at Devils Gate; the older one is the lower tongue of the Woodruff Formation, which forms the basal unit of the upper member of the type Devils Gate, and the upper one is the overlying, thin lower member of the Pilot Shale. The forebulge and the backbulge Pilot basin originated during the middle Frasnian (early Late Devonian) Early hassi Zone, shortly following the Alamo Impact within the punctata Zone in southern Nevada. Evidence of this impact is recorded by coeval and reworked shocked quartz grains in the Northern Antelope Range and possibly by a unique bypass-channel or megatsunami-uprush sandy diamictite within carbonate-platform rocks of the lower member of the type Devils Gate Limestone. Besides the Alamo Impact and three regional events, two other important global events are recorded in the Devils Gate section. The semichatovae eustatic rise, the maximum Late Devonian flooding event, coincides with the sharp lithogenetic change at the discordant boundary above the lower member of the Devils Gate Limestone. Most significantly, the Devils Gate section contains the thickest and most complete rock record in North America across the late Frasnian linguiformis Zone mass extinction event. Excellent exposures include not only the extinction shale, but also a younger. Early triangularis Zone tsunamite breccia, produced by global collapse of carbonate platforms during a shallowing event that continued into the next younger Famennian Stage. The Northern Antelope Range section is located near the top of the west side of the proto-Antler forebulge. Because of its unusual, tectonically active location, unmatched at any other Nevada localities, this section records only four regional and global events during a timespan slightly longer than that of the Devils Gate section. The global semichatovae rise and late Frasnian mass extinction event are largely masked because of the depositional complexities resulting from this location.
Fast logic?: Examining the time course assumption of dual process theory.
Bago, Bence; De Neys, Wim
2017-01-01
Influential dual process models of human thinking posit that reasoners typically produce a fast, intuitive heuristic (i.e., Type-1) response which might subsequently be overridden and corrected by slower, deliberative processing (i.e., Type-2). In this study we directly tested this time course assumption. We used a two response paradigm in which participants have to give an immediate answer and afterwards are allowed extra time before giving a final response. In four experiments we used a range of procedures (e.g., challenging response deadline, concurrent load) to knock out Type 2 processing and make sure that the initial response was intuitive in nature. Our key finding is that we frequently observe correct, logical responses as the first, immediate response. Response confidence and latency analyses indicate that these initial correct responses are given fast, with high confidence, and in the face of conflicting heuristic responses. Findings suggest that fast and automatic Type 1 processing also cues a correct logical response from the start. We sketch a revised dual process model in which the relative strength of different types of intuitions determines reasoning performance. Copyright © 2016 Elsevier B.V. All rights reserved.
Research on liquid sloshing performance in vane type tank under microgravity
NASA Astrophysics Data System (ADS)
Hu, Q.; Li, Y.; Liu, J. T.; Liang, J. Q.
2016-05-01
Propellant management device (PMD) in vane type tank mainly comprises of vane type structure parts, whose performance of restraining liquid sloshing should satisfy spacecraft requirements of high stabilization and fast orbital maneuver. Aiming at liquid sloshing performance in vane type tank under microgravity environment, gas-liquid flow model based on the volume of fluid (VOF) method was put forward, and via numerical simulation liquid sloshing performances of vane type PMD with anti-sloshing baffles and without anti-sloshing baffles in microgravity were analyzed and compared. Simulation results reveal that liquid sloshing performance of vane type PMD with anti-sloshing baffles is markedly superior vane type PMD without anti-sloshing baffles and the baffles make liquid surface become stable fast. Then by comparing between results of microgravity experiments and results of numerical simulations, they are very similar. According to present research, vane type PMD with antisloshing baffles has better effects on restraining liquid sloshing and is able to restrain observably propellant sloshing in tanks in order to satisfy spacecraft requirements of high stabilization and fast orbital maneuver.
Barnes, Timothy L.; Colabianchi, Natalie; Freedman, Darcy A.; Bell, Bethany A.; Liese, Angela D.
2018-01-01
Purpose Geographic information systems (GISs) have been used to define fast food availability, with higher availability perhaps promoting poorer quality diets. Alternative measures involve perceptions; however, few studies have examined associations between GIS-derived and perceived measures of the food environment. Methods Telephone surveys of 705 participants within an eight-county region in South Carolina were analyzed using logistic regression to examine relationships between geographic presence of and distance to various types of food retailers and perceived fast food availability. Results The mean distance to the nearest fast food restaurant was 6.1 miles, with 16% of participants having a fast food restaurant within 1 mile of home. The geographic presence of and distance to all food retailer types were significantly associated with perceived availability of fast food in unadjusted models. After adjustment, only the presence of a fast food restaurant or pharmacy was significantly associated with greater odds of higher perceived availability of fast food. Greater odds of lower perceived availability of fast food were observed with the presence of a dollar store and increasing distance to the nearest supermarket or pharmacy. Conclusions Measures of fast food availability, whether objective or perceived, may not be interchangeable. Researchers should carefully decide on the appropriate measurement tool—GIS-derived or perceived—in food environment studies. PMID:27617371
Barnes, Timothy L; Colabianchi, Natalie; Freedman, Darcy A; Bell, Bethany A; Liese, Angela D
2017-01-01
Geographic information systems (GISs) have been used to define fast food availability, with higher availability perhaps promoting poorer quality diets. Alternative measures involve perceptions; however, few studies have examined associations between GIS-derived and perceived measures of the food environment. Telephone surveys of 705 participants within an eight-county region in South Carolina were analyzed using logistic regression to examine relationships between geographic presence of and distance to various types of food retailers and perceived fast food availability. The mean distance to the nearest fast food restaurant was 6.1 miles, with 16% of participants having a fast food restaurant within 1 mile of home. The geographic presence of and distance to all food retailer types were significantly associated with perceived availability of fast food in unadjusted models. After adjustment, only the presence of a fast food restaurant or pharmacy was significantly associated with greater odds of higher perceived availability of fast food. Greater odds of lower perceived availability of fast food were observed with the presence of a dollar store and increasing distance to the nearest supermarket or pharmacy. Measures of fast food availability, whether objective or perceived, may not be interchangeable. Researchers should carefully decide on the appropriate measurement tool-GIS-derived or perceived-in food environment studies. Copyright © 2016 Elsevier Inc. All rights reserved.
Yang, Min; Du, Changji; Wang, Yinping; Liu, Jun
2017-06-01
Hashimoto's thyroiditis (HT) is characterized by dysregulated immune responses and is commonly associated with insulin resistance. However, the mechanism of insulin resistance in HT remains to be fully elucidated. The aim of the present study was to investigate the correlation between the percentage of B regulatory lymphocytes (Bregs) and insulin resistance in patients with HT but with normal thyroid function (type I). A total of 59 patients with type I HT and 38 healthy volunteers were enrolled in the study. An oral glucose tolerance test was performed to measure insulin secretion and assess β‑cell functions. Flow cytometry was performed to examine the percentages of lymphocyte populations. The patients with HT exhibited normal fasting and postprandial glucose and fasting insulin secretion, but increased secretion of early‑phase and total insulin. The patients with HT also had insufficient β‑cell compensation for insulin resistance, indicated by a reduced disposition index, in the fasting state. An elevation in the percentage of CD19+CD24+CD27+ Bregs was also observed, which correlated positively with insulin secretion and insulin resistance in the fasting state. The patients with type I HT had postprandial insulin resistance and insufficient β‑cell compensation for fasting insulin resistance. Therefore, the increase in CD19+CD24+CD27+ Bregs was closely associated with fasting insulin secretion. These results provide novel insight into the mechanism of insulin resistance in HT.
Fast Filtration of Bacterial or Mammalian Suspension Cell Cultures for Optimal Metabolomics Results
Bordag, Natalie; Janakiraman, Vijay; Nachtigall, Jonny; González Maldonado, Sandra; Bethan, Bianca; Laine, Jean-Philippe; Fux, Elie
2016-01-01
The metabolome offers real time detection of the adaptive, multi-parametric response of the organisms to environmental changes, pathophysiological stimuli or genetic modifications and thus rationalizes the optimization of cell cultures in bioprocessing. In bioprocessing the measurement of physiological intracellular metabolite levels is imperative for successful applications. However, a sampling method applicable to all cell types with little to no validation effort which simultaneously offers high recovery rates, high metabolite coverage and sufficient removal of extracellular contaminations is still missing. Here, quenching, centrifugation and fast filtration were compared and fast filtration in combination with a stabilizing washing solution was identified as the most promising sampling method. Different influencing factors such as filter type, vacuum pressure, washing solutions were comprehensively tested. The improved fast filtration method (MxP® FastQuench) followed by routine lipid/polar extraction delivers a broad metabolite coverage and recovery reflecting well physiological intracellular metabolite levels for different cell types, such as bacteria (Escherichia coli) as well as mammalian cells chinese hamster ovary (CHO) and mouse myeloma cells (NS0).The proposed MxP® FastQuench allows sampling, i.e. separation of cells from medium with washing and quenching, in less than 30 seconds and is robustly designed to be applicable to all cell types. The washing solution contains the carbon source respectively the 13C-labeled carbon source to avoid nutritional stress during sampling. This method is also compatible with automation which would further reduce sampling times and the variability of metabolite profiling data. PMID:27438065
Yamada, Yoshiji; Sakuma, Jun; Takeuchi, Ichiro; Yasukochi, Yoshiki; Kato, Kimihiko; Oguri, Mitsutoshi; Fujimaki, Tetsuo; Horibe, Hideki; Muramatsu, Masaaki; Sawabe, Motoji; Fujiwara, Yoshinori; Taniguchi, Yu; Obuchi, Shuichi; Kawai, Hisashi; Shinkai, Shoji; Mori, Seijiro; Arai, Tomio; Tanaka, Masashi
2017-10-06
We performed exome-wide association studies to identify single nucleotide polymorphisms that either influence fasting plasma glucose level or blood hemoglobin A 1c content or confer susceptibility to type 2 diabetes mellitus in Japanese. Exome-wide association studies were performed with the use of Illumina Human Exome-12 DNA Analysis or Infinium Exome-24 BeadChip arrays and with 11,729 or 8635 subjects for fasting plasma glucose level or blood hemoglobin A 1c content, respectively, or with 14,023 subjects for type 2 diabetes mellitus (3573 cases, 10,450 controls). The relation of genotypes of 41,265 polymorphisms to fasting plasma glucose level or blood hemoglobin A 1c content was examined by linear regression analysis. After Bonferroni's correction, 41 and 17 polymorphisms were significantly ( P < 1.21 × 10 -6 ) associated with fasting plasma glucose level or blood hemoglobin A 1c content, respectively, with two polymorphisms (rs139421991, rs189305583) being associated with both. Examination of the relation of allele frequencies to type 2 diabetes mellitus with Fisher's exact test revealed that 87 polymorphisms were significantly ( P < 1.21 × 10 -6 ) associated with type 2 diabetes mellitus. Subsequent multivariable logistic regression analysis with adjustment for age and sex showed that four polymorphisms (rs138313632, rs76974938, rs139012426, rs147317864) were significantly ( P < 1.44 × 10 -4 ) associated with type 2 diabetes mellitus, with rs138313632 and rs139012426 also being associated with fasting plasma glucose and rs76974938 with blood hemoglobin A 1c . Five polymorphisms-rs139421991 of CAT , rs189305583 of PDCL2 , rs138313632 of RUFY1 , rs139012426 of LOC100505549 , and rs76974938 of C21orf59 -may be novel determinants of type 2 diabetes mellitus.
Shoji, T; Sakurai, Y; Sato, H; Chihara, E; Takeuchi, M
2011-07-01
To investigate associations between fasting plasma glucose level and the prevalence of acquired colour vision impairment in type 2 diabetes patients without diabetic retinopathy. Participants in this cross-sectional study of male officials aged 20-60 yr in the Japanese Self Defence Force, underwent colour vision testing, ophthalmic examination, a standardized interview and examination of venous blood samples. Ishihara plates, a Lanthony 15-hue desaturated panel and Standard Pseudoisochromatic Plates Part 2 were used to examine colour vision. The Farnsworth-Munsell 100-hue test was performed to define acquired colour vision impairment. Cardiovascular disease risk factors were determined from serum blood samples, physical records and an interview. We performed logistic regression analysis adjusted for age, diagnosed hypertension, dyslipidaemia, cataract, glaucoma, being overweight, smoking status and alcohol intake. Crude and adjusted odds ratios were calculated for three glucose levels, which included normal fasting glucose, impaired fasting glucose and diabetes. Out of a total of 1042 men enrolled, 872 were eligible for the study, and 31 were diagnosed with acquired colour vision impairment. As compared with the subjects with normal fasting glucose (< 5.6 mmol/l), the crude odds ratio for acquired colour vision impairment was 0.93 (95% CI 0.32-2.74) for the subjects with impaired fasting glucose (5.6-6.9 mmol/l) and 8.07 (95% CI 2.48-26.22) for the patients with type 2 diabetes. The multiple-adjusted odds ratios were 0.77 (95% CI 0.25-2.34) for the subjects with impaired fasting glucose and 5.89 (95% CI 1.55-22.40) for the patients with type 2 diabetes. Our findings suggest that there is a dramatically increased prevalence of acquired colour vision impairment in type 2 diabetes patients without diabetic retinopathy which might be attributable to another pathogenesis associated with diabetic retinopathy. © 2011 The Authors. Diabetic Medicine © 2011 Diabetes UK.
Positron annihilation study of vacancy-type defects in fast-neutron-irradiated MgO·nAl2O3
NASA Astrophysics Data System (ADS)
Rahman, Abu Zayed Mohammad Saliqur; Li, Zhuoxin; Cao, Xingzhong; Wang, Baoyi; Wei, Long; Xu, Qiu; Atobe, Kozo
2014-09-01
The positron lifetimes of fast-neutron-irradiated MgO·nAl2O3 single crystals were measured to investigate the formation of cation vacancies. Al monovacancy was possibly observed in samples irradiated by fast neutrons at ultra-low temperatures. Additionally, vacancy-oxygen complex centers were possibly observed in samples irradiated at higher temperatures and fast neutron fluences. Coincidence Doppler broadening (CDB) spectra were measured to obtain information regarding the vicinity of vacancy-type defects. A peak at approximately 11 × 10-3 m0c was observed, which may be due to the presence of oxygen atoms in the neighborhood of the vacancies.
Comparison of soleus muscles from rats exposed to microgravity for 10 versus 14 days
NASA Technical Reports Server (NTRS)
Staron, R. S.; Kraemer, W. J.; Hikida, R. S.; Reed, D. W.; Murray, J. D.; Campos, G. E.; Gordon, S. E.
1998-01-01
The effects of two different duration space-flights on the extent of atrophy, fiber type composition, and myosin heavy chain (MHC) content of rat soleus muscles were compared. Adult male Fisher rats (n=12) were aboard flight STS-57 and exposed to 10 days of microgravity and adult ovariectomized female Spraque-Dawley rats (n=12) were aboard flight STS-62 for 14 days. Soleus muscles were bilaterally removed from the flight and control animals and frozen for subsequent analyses. Muscle wet weights, fiber types (I, IC, IIC, and IIA), cross-sectional area, and MHC content were determined. Although a significant difference was found between the soleus wet weights of the two ground-based control groups, they were similar with regard to MHC content (ca 90% MHCI and ca 10% MHCIIa) and fiber type composition. Unloading of the muscles caused slow-to-fast transformations which included a decrease in the percentage of type I fibers and MHCI, an increase in fibers classified as type IC, and the expression of two fast myosin heavy chains not found in the control rat soleus muscles (MHCIId and MHCIIb). Although the amount of atrophy (ca 26%) and the extent of slow-to-fast transformation (decrease in the percentage of MHCI from 90% to 82.5%) in the soleus muscles were similar between the two spaceflights, the percentages of the fast MHCs differed. After 14 days of spaceflight, the percentage of MHCIIa was significantly lower and the percentages of MHCIId and MHCIIb were significantly higher than the corresponding MHC content of the soleus muscles from the 10-day animals. Indeed, MHCIId became the predominant fast MHC after 14 days in space. These data suggest fast-to-faster transformations continued during the longer spaceflight.
Štiglic, G; Kocbek, P; Cilar, L; Fijačko, N; Stožer, A; Zaletel, J; Sheikh, A; Povalej Bržan, P
2018-05-01
To develop and validate a simplified screening test for undiagnosed Type 2 diabetes mellitus and impaired fasting glucose for the Slovenian population (SloRisk) to be used in the general population. Data on 11 391 people were collected from the electronic health records of comprehensive medical examinations in five Slovenian healthcare centres. Fasting plasma glucose as well as information related to the Finnish Diabetes Risk Score questionnaire, FINDRISC, were collected for 2073 people to build predictive models. Bootstrapping-based evaluation was used to estimate the area under the receiver-operating characteristic curve performance metric of two proposed logistic regression models as well as the Finnish Diabetes Risk Score model both at recommended and at alternative cut-off values. The final model contained five questions for undiagnosed Type 2 diabetes prediction and achieved an area under the receiver-operating characteristic curve of 0.851 (95% CI 0.850-0.853). The impaired fasting glucose prediction model included six questions and achieved an area under the receiver-operating characteristic curve of 0.840 (95% CI 0.839-0.840). There were four questions that were included in both models (age, sex, waist circumference and blood sugar history), with physical activity selected only for undiagnosed Type 2 diabetes and questions on family history and hypertension drug use selected only for the impaired fasting glucose prediction model. This study proposes two simplified models based on FINDRISC questions for screening of undiagnosed Type 2 diabetes and impaired fasting glucose in the Slovenian population. A significant improvement in performance was achieved compared with the original FINDRISC questionnaire. Both models include waist circumference instead of BMI. © 2018 Diabetes UK.
NASA Astrophysics Data System (ADS)
Tappe, Sebastian; Graham Pearson, D.; Kjarsgaard, Bruce A.; Nowell, Geoff; Dowall, David
2013-06-01
Late Cretaceous-Eocene kimberlites from the Lac de Gras area, central Slave craton, show the most extreme Nd-Hf isotope decoupling observed for kimberlites worldwide. They are characterized by a narrow range of moderately enriched Nd isotope compositions (ɛNd(i)=-0.4 to -3.5) that contrasts strongly with their moderately depleted to highly enriched ɛHf(i) values (+3.9 to -9.9). Although digestion of cratonic mantle material in proto-kimberlite melt can theoretically produce steep arrays in Nd-Hf isotope space, the amount of contaminant required to explain the Lac de Gras data is unrealistic. Instead, it is more plausible that mixing of compositionally discrete melt components within an isotopically variable source region is responsible for the steep Nd-Hf isotope array. As development of strongly negative ΔɛHf requires isotopic aging of a precursor material with Sm/Nd≫Lu/Hf for billion-year timescales, a number of models have been proposed where ancient MORB crust trapped in the mantle transition zone is the ultimate source of the extreme Hf isotope signature. However, we provide a conceptual modification and demonstrate that OIB-type domains within ancient subducted oceanic lithosphere can produce much stronger negative ΔɛHf during long-term isolation. Provided that these OIB-type domains have lower melting points compared with associated MORB crust, they are among the first material to melt within the transition zone during thermal perturbations. The resulting hydrous alkali silicate melts react strongly with depleted peridotite at the top of the transition zone and transfer negative ΔɛHf signatures to less dense materials, which can be more easily entrained within upward flowing mantle. Once these entrained refertilized domains rise above 300 km depth, they may become involved in CO2- and H2O-fluxed redox melting of upper mantle peridotite beneath a thick cratonic lid. We argue that incorporation of ancient transition zone material, which includes ultradeep diamonds, into the convecting upper mantle source region of Lac de Gras kimberlites was due to vigorous mantle return flow. This occurred in direct response to fast and complex subduction along the western margin of North America during the Late Cretaceous.
Therapeutic fasting in patients with metabolic syndrome and impaired insulin resistance.
Stange, Rainer; Pflugbeil, Christine; Michalsen, Andreas; Uehleke, Bernhard
2013-01-01
In this study, we evaluated whether a short- to mid-term fasting therapy (7-18 days) might improve insulin resistance according to the homeostasis model assessment for insulin resistance (HOMA-IR), measured during mid-term (80 days) follow-up observation in patients with metabolic syndrome. In this open label observational study in inpatients, criteria of metabolic syndrome were defined. Before medically controlled Buchinger fasting, a wash-out period for hypoglycemic agents was conducted. Further evaluation was carried out on day 80. 25 patients (13 males, 12 females, mean age 61.3 years) were included in this study (mean fasting duration 11.5 days). Out of 16 inpatients with type 2 diabetes, 4 had been treated with metformin, 3 with insulin, and 1 with glimepiride before the intervention. After therapy, body mass index (BMI), fasting insulin, fasting glucose, and HOMA-IR were all significantly reduced. Compared to baseline, HOMA-IR decreased by 33% in all patients, by 38% in patients with type 2 diabetes, and by 23% in patients without diabetes. At day 80, BMI further improved, while other parameters showed complete (insulin) or partial (glucose, HOMA-IR) rebound. At this time, HOMA-IR values showed an only insignificant improvement in 15% of all patients, in 20% of patients with type 2 diabetes, and in 6% of patients without diabetes. There was no correlation between change in BMI and change in HOMA-IR (r(2) = 0.008, baseline minus day 80). No serious side effects were observed. Fasting as a safe and acceptable procedure may cause short- and mid-term improvement of increased insulin resistance (HOMA-IR). Patients with type 2 diabetes benefit more than those without diabetes. A possible clinical significance of this effect should be explored in larger and controlled clinical trials. © 2014 S. Karger GmbH, Freiburg.
Evaluation of Fast-Time Wake Vortex Prediction Models
NASA Technical Reports Server (NTRS)
Proctor, Fred H.; Hamilton, David W.
2009-01-01
Current fast-time wake models are reviewed and three basic types are defined. Predictions from several of the fast-time models are compared. Previous statistical evaluations of the APA-Sarpkaya and D2P fast-time models are discussed. Root Mean Square errors between fast-time model predictions and Lidar wake measurements are examined for a 24 hr period at Denver International Airport. Shortcomings in current methodology for evaluating wake errors are also discussed.
NASA Astrophysics Data System (ADS)
Buchwaldt, R.; Toulkeridis, T.
2013-05-01
The timing of pan-Pacific Gondwanide Orogeny in the proto-Andes, and its driving mechanisms are still highly debated and relies predominantly upon whole-rock Rb-Sr and K-Ar chronology and rudimentary mineralogy and geochemistry. In order to decipher these uncertainties we have studied the composition, age and provenance of granitoids along the strike of the Eastern Cordillera of Ecuador and related these deep-seated and surface tectonic processes attending the Late Cretaceous-Palaeogene history of the northern Andes. The plutonic rocks constitute a metaluminous to peraluminous (A/CNK ~ 0.8-1.2), calc-alkaline suite. A unimodal and wide compositional range of the intrusives (49-78 wt. % SiO2) is characteristic of this I-type orogenic suites. Mantle-normalized trace element patterns reveal typical subduction-related signature. Chondrite-normalized REE patterns do not show significant HREE fractionation suggesting the absence of high-pressure residual mineralogy in the source and formation in a "normal thickness", garnet-free crust. Slight Eu anomalies, lowering Sr contents, and concave-up REE patterns of samples dioritic in composition indicate a model involving fractionation of plagioclase, amphibole and pyroxene from a basaltic parent. The analyzed zircon crystals are colorless - transparent ranging in size from 50 to 250 μm. In CL images, 95% of the zircons exhibit oscillatory zonation, characteristic of a magmatic origin. This observation is consistent with the REE zircon composition showing a are characteristic steep positive slope from La to Lu with a significantly positive Ce-anomaly and slight negative Eu-anomaly. There is very little variation in Hf isotopic composition with most of the crust maintains near chondritic Zr/Hf ratios of around 35-40. Our results indicate the development of two tectonic episodes; with the first varying between 210-250 Ma and the second approximate 170-180 Ma. These results are consistent with similar events observed throughout the northern Andes from Peru to Columbia. The occurrence of numerous granite intrusions during Triassic times along the South American margin indicates that western South America underwent a widespread thermal anomaly between 250 and 210 Ma, which produced large amounts of granitoids. We argue that this occurrence is associated with the closure of the Panthalassan Gondwana sutur between 200 and 300 Ma and the correlated magmatism is related to the development of strike-slip tectonics subparallel to the proto-Andean margin. Contrasting to the older episode the younger magmatics appears to be the ultimate dispersal of Gondwana in the Cretaceous, which has been followed by the establishment of a continental arc that has intermittently characterized the modern Andean orogeny for the past 180 Ma.
MiR-191 Regulates Primary Human Fibroblast Proliferation and Directly Targets Multiple Oncogenes
Polioudakis, Damon; Abell, Nathan S.; Iyer, Vishwanath R.
2015-01-01
miRNAs play a central role in numerous pathologies including multiple cancer types. miR-191 has predominantly been studied as an oncogene, but the role of miR-191 in the proliferation of primary cells is not well characterized, and the miR-191 targetome has not been experimentally profiled. Here we utilized RNA induced silencing complex immunoprecipitations as well as gene expression profiling to construct a genome wide miR-191 target profile. We show that miR-191 represses proliferation in primary human fibroblasts, identify multiple proto-oncogenes as novel miR-191 targets, including CDK9, NOTCH2, and RPS6KA3, and present evidence that miR-191 extensively mediates target expression through coding sequence (CDS) pairing. Our results provide a comprehensive genome wide miR-191 target profile, and demonstrate miR-191’s regulation of primary human fibroblast proliferation. PMID:25992613
NASA Astrophysics Data System (ADS)
Toshimitsu, Kazuhiko; Hara, Kosei; Mikajiri, Shuuto; Takiguchi, Naoki
2016-12-01
A rotating detonation engine (RDE) is one of candidates of aerospace engines for supersonic cruse, which is better for propulsion system than a pulse detonation engine (PDE) from the view of continuous thrust and simple structure. The propulsion performance of a proto-type RDE and a PDE by single pulse explosion with methane-oxygen is investigated. Furthermore, the performance of the RDE with acetylene-oxygen gas mixtures is investigated. Its impulse is estimated through ballistic pendulum method with maximum displacement and damping ratio. The comparison of specific impulses of the mixture gases at atmospheric pressure is shown. The specific impulses of the RDE and the PDE are almost same with methane-oxygen gas. Furthermore, the fuel-base specific impulse of the RDE with acetylene-oxygen gas is about over twice as large as one of methane-oxygen, and its maximum specific impulse is 1100 seconds.
Absence of ras-gene hot-spot mutations in canine fibrosarcomas and melanomas.
Murua Escobar, Hugo; Günther, Kathrin; Richter, Andreas; Soller, Jan T; Winkler, Susanne; Nolte, Ingo; Bullerdiek, Jörn
2004-01-01
Point mutations within ras proto-oncogenes, particularly within the mutational hot-spot codons 12, 13 and 61, are frequently detected in human malignancies and in different types of experimentally-induced tumours in animals. So far little is known about ras mutations in naturally occurring canine fibrosarcomas or K-ras mutations in canine melanomas. To elucidate whether ras mutations exist in these naturally occurring tumours in dogs, in the present study we screened 13 canine fibrosarcomas, 2 feline fibrosarcomas and 11 canine melanomas for point mutations, particularly within the mutational hot-spots, making this the first study to investigate a large number of canine fibrosarcomas. None of the samples showed a K- or N-ras hot spot mutation. Thus, our data strongly suggest that ras mutations at the hot-spot loci are very rare and do not play a major role in the pathogenesis of the spontaneously occurring canine tumours investigated.
Molecular screening strategies for NF1-like syndromes with café-au-lait macules
Zhang, Jia; Li, Ming; Yao, Zhirong
2016-01-01
Multiple café-au-lait macules (CALM) are usually associated with neurofibromatosis type 1 (NF1), one of the most common hereditary disorders. However, a group of genetic disorders presenting with CALM have mutations that are involved in human skin pigmentation regulation signaling pathways, including KIT ligand/KIT proto-oncogene receptor tyrosine kinase and Ras/mitogen-activated protein kinase. These disorders, which include Legius syndrome, Noonan syndrome with multiple lentigines or LEOPARD syndrome, and familial progressive hyperpigmentation) are difficult to distinguish from NF1 at early stages, using skin appearance alone. Furthermore, certain syndromes are clinically overlapping and molecular testing is a vital diagnostic method. The present review aims to provide an overview of these ‘NF1-like’ inherited diseases and recommend a cost-effective strategy for making a clear diagnosis among these diseases with an ambiguous borderline. PMID:27666661
Space Weathering on 4 Vesta: Processes and Products
NASA Technical Reports Server (NTRS)
Pieters, C. M.; Blewett, D. T.; Gaffey, M.; Mittlefehldt, D. W.; De Sanctis, M. C.; Reddy, V.; Nathues, A.; Denevi, B. W.; Li, J. Y.; McCord, T. B.;
2012-01-01
The bulk properties of Vesta have previously been linked directly to the howardite, eucrite, and diogenite (HED) meteorites through remote mineral characterization of its surface from Earth-based spectroscopy [e.g., 1]. A long-standing enigma has been why does Vesta s surface appear to have suffered so little alteration from the space environment, whereas materials exposed on the Moon and some S-type asteroids are significantly changed (grains develop rims containing nano-phase opaques [e.g. 2]). The Dawn spacecraft is well suited to address this issue and is half through its extended mapping phase of this remarkable proto-planet [3]. On a local scale Dawn sees evidence of recent exposures at craters, but distinctive surface materials blend into background at older craters. The presence of space weathering processes are thus evident at Vesta, but the character and form are controlled by the unique environment and geologic history of this small body.
Cancer Osaka thyroid (Cot) phosphorylates Polo-like kinase (PLK1) at Ser137 but not at Thr210.
Wu, Binhui; Jiang, Ping; Mu, Yuguang; Wilmouth, Rupert C
2009-12-01
Cancer Osaka thyroid (Cot) is a proto-oncogenic kinase which belongs to the MAP3K family. A peptide-based substrate screening assay revealed that Cot has the ability to phosphorylate Polo-like kinase 1 (Plk1) at Ser137. Kinase assays with intact Plk1 and peptides surrounding Ser137 and Thr210 indicated further that Cot phosphorylates Ser137 but not Thr210. Additional support came from 3D peptide structure prediction and Cot-Plk1 interaction modeling. In vivo experiments demonstrated that wild type Cot, but not a kinase-dead mutant, has the ability to phosphorylate Ser137. Knockdown of Cot in Hela showed a reduction in the level of phosphorylation of Ser137. These results imply for the first time that Cot might be an upstream kinase of Plk1 and suggest a new mechanism for the regulation of the cellular function of Plk1.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Fong, Theodore E.
2013-05-06
The technical paper summarizes the project work conducted in the development of Kerf-Free silicon wafering equipment for silicon solar wafering. This new PolyMax technology uses a two step process of implantation and cleaving to exfoliate 50um to 120um wafers with thicknesses ranging from 50um to 120um from a 125mm or 156mm pseudo-squared silicon ingot. No kerf is generated using this method of wafering. This method of wafering contrasts with the current method of making silicon solar wafers using the industry standard wire saw equipment. The report summarizes the activity conducted by Silicon Genesis Corporation in working to develop this technologymore » further and to define the roadmap specifications for the first commercial proto-type equipment for high volume solar wafer manufacturing using the PolyMax technology.« less
Miniature Extreme Ultraviolet Solar Radiometers
NASA Astrophysics Data System (ADS)
McMullin, D. R.; Seely, J. F.; Bremer, J.; Jones, A. R.; Vest, R.; Sakdinawat, A.
2015-12-01
Free-standing zone plates for use in EUV solar radiometers have been fabricated using electron beam lithography and calibrated at the NIST SURF synchrotron facility. The radiometers that we are developing use zone plates (ZPs) to focus the total solar irradiance in narrow EUV spectral bands and measure it with negligible sensitivity to field angle and polarization, and with greater accuracy and greater long-term stability than radiometers that have alternative architectures. These radiometers are easy to accommodate on spacecraft due to their small size, low mass, low power requirements, low data rates, and modest pointing requirements. A proto-type instrument will be presented with performance characteristics and spacecraft resource requirements for hosting these new instruments. The compact size of the optical train make these zone plates attractive for small CubeSats. The robustness of the compact design makes these radiometers available for a large variety of applications.
NASA Technical Reports Server (NTRS)
Vanderbilt, Peter
1999-01-01
This paper gives an overview of GXD, a framework facilitating publication and use of data from diverse data sources. GXD defines an object-oriented data model designed to represent a wide range of things including data, its metadata, resources and query results. GXD also defines a data transport language. a dialect of XML, for representing instances of the data model. This language allows for a wide range of data source implementations by supporting both the direct incorporation of data and the specification of data by various rules. The GXD software library, proto-typed in Java, includes client and server runtimes. The server runtime facilitates the generation of entities containing data encoded in the GXD transport language. The GXD client runtime interprets these entities (potentially from many data sources) to create an illusion of a globally interconnected data space, one that is independent of data source location and implementation.
Internally Cooled Monolithic Silicon Nitride Aerospace Components
NASA Technical Reports Server (NTRS)
Best, Jonathan E.; Cawley, James D.; Bhatt, Ramakrishna T.; Fox, Dennis S.; Lang, Jerry (Technical Monitor)
2000-01-01
A set of rapid prototyping (RP) processes have been combined with gelcasting to make ceramic aerospace components that contain internal cooling geometry. A mold and core combination is made using a MM6Pro (Sanders Prototyping, Inc.) and SLA-250/40 (3Dsystems, Inc.). The MM6Pro produces cores from ProtoBuild (trademarked) wax that are dissolved in room temperature ethanol following gelcasting. The SLA-250/40 yields epoxy/acrylate reusable molds. Parts produced by this method include two types of specimens containing a high density of thin long cooling channels, thin-walled cylinders and plates, as well as a model hollow airfoil shape that can be used for burner rig evaluation of coatings. Both uncoated and mullite-coated hollow airfoils has been tested in a Mach 0.3 burner rig with cooling air demonstrating internal cooling and confirming the effectiveness of mullite coatings.
De Silva, N. Maneka G.; Freathy, Rachel M.; Palmer, Tom M.; Donnelly, Louise A.; Luan, Jian'an; Gaunt, Tom; Langenberg, Claudia; Weedon, Michael N.; Shields, Beverley; Knight, Beatrice A.; Ward, Kirsten J.; Sandhu, Manjinder S.; Harbord, Roger M.; McCarthy, Mark I.; Smith, George Davey; Ebrahim, Shah; Hattersley, Andrew T.; Wareham, Nicholas; Lawlor, Debbie A.; Morris, Andrew D.; Palmer, Colin N.A.; Frayling, Timothy M.
2011-01-01
OBJECTIVE The causal nature of associations between circulating triglycerides, insulin resistance, and type 2 diabetes is unclear. We aimed to use Mendelian randomization to test the hypothesis that raised circulating triglyceride levels causally influence the risk of type 2 diabetes and raise normal fasting glucose levels and hepatic insulin resistance. RESEARCH DESIGN AND METHODS We tested 10 common genetic variants robustly associated with circulating triglyceride levels against the type 2 diabetes status in 5,637 case and 6,860 control subjects and four continuous outcomes (reflecting glycemia and hepatic insulin resistance) in 8,271 nondiabetic individuals from four studies. RESULTS Individuals carrying greater numbers of triglyceride-raising alleles had increased circulating triglyceride levels (SD 0.59 [95% CI 0.52–0.65] difference between the 20% of individuals with the most alleles and the 20% with the fewest alleles). There was no evidence that the carriers of greater numbers of triglyceride-raising alleles were at increased risk of type 2 diabetes (per weighted allele odds ratio [OR] 0.99 [95% CI 0.97–1.01]; P = 0.26). In nondiabetic individuals, there was no evidence that carriers of greater numbers of triglyceride-raising alleles had increased fasting insulin levels (SD 0.00 per weighted allele [95% CI −0.01 to 0.02]; P = 0.72) or increased fasting glucose levels (0.00 [−0.01 to 0.01]; P = 0.88). Instrumental variable analyses confirmed that genetically raised circulating triglyceride levels were not associated with increased diabetes risk, fasting glucose, or fasting insulin and, for diabetes, showed a trend toward a protective association (OR per 1-SD increase in log10 triglycerides: 0.61 [95% CI 0.45–0.83]; P = 0.002). CONCLUSIONS Genetically raised circulating triglyceride levels do not increase the risk of type 2 diabetes or raise fasting glucose or fasting insulin levels in nondiabetic individuals. One explanation for our results is that raised circulating triglycerides are predominantly secondary to the diabetes disease process rather than causal. PMID:21282362
De Silva, N Maneka G; Freathy, Rachel M; Palmer, Tom M; Donnelly, Louise A; Luan, Jian'an; Gaunt, Tom; Langenberg, Claudia; Weedon, Michael N; Shields, Beverley; Knight, Beatrice A; Ward, Kirsten J; Sandhu, Manjinder S; Harbord, Roger M; McCarthy, Mark I; Smith, George Davey; Ebrahim, Shah; Hattersley, Andrew T; Wareham, Nicholas; Lawlor, Debbie A; Morris, Andrew D; Palmer, Colin N A; Frayling, Timothy M
2011-03-01
The causal nature of associations between circulating triglycerides, insulin resistance, and type 2 diabetes is unclear. We aimed to use Mendelian randomization to test the hypothesis that raised circulating triglyceride levels causally influence the risk of type 2 diabetes and raise normal fasting glucose levels and hepatic insulin resistance. We tested 10 common genetic variants robustly associated with circulating triglyceride levels against the type 2 diabetes status in 5,637 case and 6,860 control subjects and four continuous outcomes (reflecting glycemia and hepatic insulin resistance) in 8,271 nondiabetic individuals from four studies. Individuals carrying greater numbers of triglyceride-raising alleles had increased circulating triglyceride levels (SD 0.59 [95% CI 0.52-0.65] difference between the 20% of individuals with the most alleles and the 20% with the fewest alleles). There was no evidence that the carriers of greater numbers of triglyceride-raising alleles were at increased risk of type 2 diabetes (per weighted allele odds ratio [OR] 0.99 [95% CI 0.97-1.01]; P = 0.26). In nondiabetic individuals, there was no evidence that carriers of greater numbers of triglyceride-raising alleles had increased fasting insulin levels (SD 0.00 per weighted allele [95% CI -0.01 to 0.02]; P = 0.72) or increased fasting glucose levels (0.00 [-0.01 to 0.01]; P = 0.88). Instrumental variable analyses confirmed that genetically raised circulating triglyceride levels were not associated with increased diabetes risk, fasting glucose, or fasting insulin and, for diabetes, showed a trend toward a protective association (OR per 1-SD increase in log(10) triglycerides: 0.61 [95% CI 0.45-0.83]; P = 0.002). Genetically raised circulating triglyceride levels do not increase the risk of type 2 diabetes or raise fasting glucose or fasting insulin levels in nondiabetic individuals. One explanation for our results is that raised circulating triglycerides are predominantly secondary to the diabetes disease process rather than causal.
Generalized File Management System or Proto-DBMS?
ERIC Educational Resources Information Center
Braniff, Tom
1979-01-01
The use of a data base management system (DBMS) as opposed to traditional data processing is discussed. The generalized file concept is viewed as an entry level step to the DBMS. The transition process from one system to the other is detailed. (SF)
What Has Cancer Taught Us about the Cell?
ERIC Educational Resources Information Center
Hatton, Mary E.; Hatton, Mark P.
1997-01-01
Discusses what is cancer; proto-oncogenes that encode four classes of proteins including growth factors, growth factor receptors, intracellular signaling messengers, and transcription factors; tumor suppressors; and cancer therapy including metabolic inhibitors, alkylating agents and antibiotics, mitotic inhibitors, and hormone-related therapy.…
Deeb, Asma; Al Qahtani, Nabras; Attia, Salima; Al Suwaidi, Hana; Nagelkerke, Nico
2016-09-01
Ramadan fasting by patients with type 1 diabetes might predispose them to hypoglycemia. There are no data on the optimal way of adjusting basal insulin during fasting. We aim at studying whether reducing basal insulin during Ramadan reduces the frequency of symptomatic hypoglycemia. We enrolled children and adolescents with type 1 diabetes who intended to fast during Ramadan. Logbooks were given to subjects to mark days fasted, symptomatic hypoglycemia, and dose of basal insulin on all days of Ramadan. Logbooks were examined. Glucometers and insulin pumps were downloaded. Seventy-five patients were enrolled. The age was 10.2-18.9 (14.5) years. Sixty-eight patients had results analyzed. Forty-one patients were on pumps, and 27 patients were on multiple daily injections (MDI). Mean HbA1c was 7.9 (1.2) and 8.4 (1.3) for the pump and the MDI, respectively (P = 0.007). Thirty-nine patients had hypoglycemia leading to breaking fast. The mean number of episodes of breaking fast was 3 (1-8). Thirty-five of the 68 patients had reduced basal insulin. The difference in the frequency of hypoglycemia in those who reduced/did not reduce insulin was not statistically significant (P > 0.10). Fifteen patients on MDI and 24 patients on pumps had at least one episode of breaking fast. Six and 18 of the patients on MDI and pumps, respectively, reduced basal insulin (P > 0.10). This is the first study examining the impact of reduction of basal insulin on hypoglycemia in adolescents. Reducing basal insulin during Ramadan fasting does not decrease the risk of symptomatic hypoglycemia. Use of the insulin pump does not appear to be different from MDI in the frequency of occurrence of hypoglycemia.
Mareco, Edson A; Garcia de la Serrana, Daniel; Johnston, Ian A; Dal-Pai-Silva, Maeli
2015-03-14
The Pacu (Piaractus mesopotamicus) is a member of the Characiform family native to the Prata Basin (South America) and a target for the aquaculture industry. A limitation for the development of a selective breeding program for this species is a lack of available genetic information. The primary objectives of the present study were 1) to increase the genetic resources available for the species, 2) to exploit the anatomical separation of myotomal fibres types to compare the transcriptomes of slow and fast muscle phenotypes and 3) to systematically investigate the expression of Ubiquitin Specific Protease (USP) family members in fast and slow muscle in response to fasting and refeeding. We generated 0.6 Tb of pair-end reads from slow and fast skeletal muscle libraries. Over 665 million reads were assembled into 504,065 contigs with an average length of 1,334 bp and N50 = 2,772 bp. We successfully annotated nearly 47% of the transcriptome and identified around 15,000 unique genes and over 8000 complete coding sequences. 319 KEGG metabolic pathways were also annotated and 380 putative microsatellites were identified. 956 and 604 genes were differentially expressed between slow and fast skeletal muscle, respectively. 442 paralogues pairs arising from the teleost-specific whole genome duplication were identified, with the majority showing different expression patterns between fibres types (301 in slow and 245 in fast skeletal muscle). 45 members of the USP family were identified in the transcriptome. Transcript levels were quantified by qPCR in a separate fasting and refeeding experiment. USP genes in fast muscle showed a similar transient increase in expression with fasting as the better characterized E3 ubiquitin ligases. We have generated a 53-fold coverage transcriptome for fast and slow myotomal muscle in the pacu (Piaractus mesopotamicus) significantly increasing the genetic resources available for this important aquaculture species. We describe significant differences in gene expression between muscle fibre types for fundamental components of general metabolism, the Pi3k/Akt/mTor network and myogenesis, including detailed analysis of paralogue expression. We also provide a comprehensive description of USP family member expression between muscle fibre types and with changing nutritional status.
Spike synchrony reveals emergence of proto-objects in visual cortex.
Martin, Anne B; von der Heydt, Rüdiger
2015-04-29
Neurons at early stages of the visual cortex signal elemental features, such as pieces of contour, but how these signals are organized into perceptual objects is unclear. Theories have proposed that spiking synchrony between these neurons encodes how features are grouped (binding-by-synchrony), but recent studies did not find the predicted increase in synchrony with binding. Here we propose that features are grouped to "proto-objects" by intrinsic feedback circuits that enhance the responses of the participating feature neurons. This hypothesis predicts synchrony exclusively between feature neurons that receive feedback from the same grouping circuit. We recorded from neurons in macaque visual cortex and used border-ownership selectivity, an intrinsic property of the neurons, to infer whether or not two neurons are part of the same grouping circuit. We found that binding produced synchrony between same-circuit neurons, but not between other pairs of neurons, as predicted by the grouping hypothesis. In a selective attention task, synchrony emerged with ignored as well as attended objects, and higher synchrony was associated with faster behavioral responses, as would be expected from early grouping mechanisms that provide the structure for object-based processing. Thus, synchrony could be produced by automatic activation of intrinsic grouping circuits. However, the binding-related elevation of synchrony was weak compared with its random fluctuations, arguing against synchrony as a code for binding. In contrast, feedback grouping circuits encode binding by modulating the response strength of related feature neurons. Thus, our results suggest a novel coding mechanism that might underlie the proto-objects of perception. Copyright © 2015 the authors 0270-6474/15/356860-11$15.00/0.
Choi, Won-Il; Jeon, Bu-Nam; Park, Hyejin; Yoo, Jung-Yoon; Kim, Yeon-Sook; Koh, Dong-In; Kim, Myung-Hwa; Kim, Yu-Ri; Lee, Choong-Eun; Kim, Kyung-Sup; Osborne, Timothy F.; Hur, Man-Wook
2008-01-01
FBI-1 (Pokemon/ZBTB7A) is a proto-oncogenic transcription factor of the BTB/POZ (bric-à-brac, tramtrack, and broad complex and pox virus zinc finger) domain family. Recent evidence suggested that FBI-1 might be involved in adipogenic gene expression. Coincidentally, expression of FBI-1 and fatty-acid synthase (FASN) genes are often increased in cancer and immortalized cells. Both FBI-1 and FASN are important in cancer cell proliferation. SREBP-1 is a major regulator of many adipogenic genes, and FBI-1 and SREBP-1 (sterol-responsive element (SRE)-binding protein 1) interact with each other directly via their DNA binding domains. FBI-1 enhanced the transcriptional activation of SREBP-1 on responsive promoters, pGL2-6x(SRE)-Luc and FASN gene. FBI-1 and SREBP-1 synergistically activate transcription of the FASN gene by acting on the proximal GC-box and SRE/E-box. FBI-1, Sp1, and SREBP-1 can bind to all three SRE, GC-box, and SRE/E-box. Binding competition among the three transcription factors on the GC-box and SRE/E-box appears important in the transcription regulation. FBI-1 is apparently changing the binding pattern of Sp1 and SREBP-1 on the two elements in the presence of induced SREBP-1 and drives more Sp1 binding to the proximal promoter with less of an effect on SREBP-1 binding. The changes induced by FBI-1 appear critical in the synergistic transcription activation. The molecular mechanism revealed provides insight into how proto-oncogene FBI-1 may attack the cellular regulatory mechanism of FASN gene expression to provide more phospholipid membrane components needed for rapid cancer cell proliferation. PMID:18682402
Briegel, K; Hentsch, B; Pfeuffer, I; Serfling, E
1991-01-01
The inducible, T cell-specific enhancers of murine and human Interleukin 2 (Il-2) genes contain the kB-like sequence GGGATTTCACC as an essential cis-acting enhancer motif. When cloned in multiple copies this so-called TCEd (distal T cell element) acts as an inducible proto-enhancer element in E14 T lymphoma cells, but not in HeLa cells. In extracts of induced, Il-2 secreting El4 cells three individual protein factors bind to TCEd DNA. The binding of the most prominent factor, named TCF-1 (T cell factor 1), is correlated with the proto-enhancer activity of TCEd. TCF-1 consists of two polypeptides of about 50 kD and 105 kD; the former seems to be related to the 50 kD polypeptide of NF-kB. Purified NF-kB is also able to bind to the TCEd, but TCF-1 binds stronger than NF-kB to TCEd DNA. The conversion of the TCEd to a 'perfect' NF-kB binding site leads to a tighter binding of NF-kB to TCEd DNA and, as a functional consequence, to the activity of the 'converted' TCEd motifs in HeLa cells. Thus, the substitution of the underlined A residue to a C within the GGGATTTCACC motif abolishes its T cell-restricted activity and leads to its functioning in both El4 cells and HeLa cells. These results indicate that lymphocyte-specific factors binding to the TCEd are involved in the control of T cell specific-transcription of the Il-2 gene. Images PMID:1945879
Anuar, Tengku Shahrul; Ghani, Mohamed Kamel Abdul; Azreen, Siti Nor; Salleh, Fatmah Md; Moktar, Norhayati
2013-02-22
Blastocystis has been described as the most common intestinal parasite in humans and has an increased impact on public health. However, the transmission of this parasite has not been conclusively determined. To contribute to a better comprehension of the epidemiology of this infection, a cross-sectional survey aimed at providing the first documented data on the prevalence and risk factors associated with Blastocystis infection was carried out among three Orang Asli tribes (Proto-Malay, Negrito and Senoi) in selected villages at Negeri Sembilan, Perak and Pahang, Peninsular Malaysia. Faecal samples were examined by formalin-ether sedimentation and trichrome staining techniques. Of 500 individuals, 20.4% (102) were detected positive for Blastocystis; 13.3% (20/150) of Proto-Malays, 21.6% (30/139) of Negritos and 24.7% (52/211) of Senois were positive for Blastocystis, respectively. The positive cases showed a decrease with increasing age and most of the positive cases were observed in individuals less than 15 years old. Multivariate analysis confirmed that drinking untreated water and the presence of other family members infected with Blastocystis were significant risk factors of infection among the three tribes and overall population studied. Essentially, the findings highlighted that Blastocystis infection is prevalent among Orang Asli communities in Malaysia. Further studies using molecular approaches to distinguish the subtype of Blastocystis is needed. The present study also revealed that this infection may be transmitted through waterborne and human-to-human contact. Therefore, interventions with the provision of clean water supply for the communities and health education especially to the parents are urgently required.
Progovac, Ljiljana
2016-01-01
In making an argument for the antiquity of language, based on comparative evidence, Dediu and Levinson (2013) express hope that some combinations of structural features will prove so conservative that they will allow deep linguistic reconstruction. I propose that the earliest stages of syntax/grammar as reconstructed in Progovac (2015a), based on a theoretical and data-driven linguistic analysis, provide just such a conservative platform, which would have been commanded also by Neandertals and the common ancestor. I provide a fragment of this proto-grammar, which includes flat verb-noun compounds used for naming and insult (e.g., rattle-snake, cry-baby, scatter-brain), and paratactic (loose) combinations of such flat structures (e.g., Come one, come all; You seek, you find). This flat, binary, paratactic platform is found in all languages, and can be shown to serve as foundation for any further structure building. However, given the degree and nature of variation across languages in elaborating syntax beyond this proto-stage, I propose that hierarchical syntax did not emerge once and uniformly in all its complexity, but rather multiple times, either within Africa, or after dispersion from Africa. If so, then, under the uniregional hypothesis, our common ancestor with Neandertals, H. heidelbergensis, could not have commanded hierarchical syntax, but “only” the proto-grammar. Linguistic reconstructions of this kind are necessary for formulating precise and testable hypotheses regarding language evolution. In addition to the hominin timeline, this reconstruction can also engage, and negotiate between, the fields of neuroscience and genetics, as I illustrate with one specific scenario involving FOXP2 gene. PMID:27877146
A bio-inspired method and system for visual object-based attention and segmentation
NASA Astrophysics Data System (ADS)
Huber, David J.; Khosla, Deepak
2010-04-01
This paper describes a method and system of human-like attention and object segmentation in visual scenes that (1) attends to regions in a scene in their rank of saliency in the image, (2) extracts the boundary of an attended proto-object based on feature contours, and (3) can be biased to boost the attention paid to specific features in a scene, such as those of a desired target object in static and video imagery. The purpose of the system is to identify regions of a scene of potential importance and extract the region data for processing by an object recognition and classification algorithm. The attention process can be performed in a default, bottom-up manner or a directed, top-down manner which will assign a preference to certain features over others. One can apply this system to any static scene, whether that is a still photograph or imagery captured from video. We employ algorithms that are motivated by findings in neuroscience, psychology, and cognitive science to construct a system that is novel in its modular and stepwise approach to the problems of attention and region extraction, its application of a flooding algorithm to break apart an image into smaller proto-objects based on feature density, and its ability to join smaller regions of similar features into larger proto-objects. This approach allows many complicated operations to be carried out by the system in a very short time, approaching real-time. A researcher can use this system as a robust front-end to a larger system that includes object recognition and scene understanding modules; it is engineered to function over a broad range of situations and can be applied to any scene with minimal tuning from the user.
NASA Astrophysics Data System (ADS)
Godet, A.; Helfrich-Dennis, M. M.; Suarez, M. B.
2015-12-01
Mesozoic climate change has been extensively studied in the Tethys, while their expression in the proto Gulf of Mexico can still be precised, especially for the time period straddling the Aptian-Albian boundary. During this time period, significant climatic events may correlate between the proto-Atlantic and the Tethys, amongst which the Oceanic Anoxic Event 1b that corresponds to a period of marine anoxia across this stage boundary. We hypothesized that this event may have impacted the shallow-marine carbonate factory that is now preserved near the town of Bisbee (Mule Mountains, southern Arizona). This sedimentary succession has been chosen because it documents a switch from a siliclastic- to carbonate-dominated sedimentation during the targeted time interval. Using carbon isotope chemostratigraphy, we were able to refine the stratigraphic framework of the Mural Formation, which was previously based on benthic organisms such as rudist bivalves and orbitolinids, such as Mesorbitolina texana. The OAE1b has been identified based on its peculiar δ13C signature supported by biostratigraphic data. Concurrently, microfacies analysis helped in reconstructing variations in sea levels. In southern Arizona, the OAE1b equivalent belongs to a third-order transgressive systems tract, and extends into the following highstand systems track. The maximum flooding surface is defined within a thick rudist biostrome with chondrodonts. It thus seems that the OAE1b did not strongly affected the carbonate factory in this region of the proto Gulf of Mexico. As a conclusion, limestone rocks now preserved in southeastern Arizona were deposited during the Late Aptian to Early Albian time period, during which the OAE1b developed. This paleoceanographic perturbation is expressed in the sedimentary record by its unique carbon isotope signature, with no significant impact on benthic ecosystems.
Orozco-Morales, Mario; Sánchez-García, Francisco Javier; Golán-Cancela, Irene; Hernández-Pedro, Norma; Costoya, Jose A; de la Cruz, Verónica Pérez; Moreno-Jiménez, Sergio; Sotelo, Julio; Pineda, Benjamín
2015-01-01
Several theories aim to explain the malignant transformation of cells, including the mutation of tumor suppressors and proto-oncogenes. Deletion of Rb (a tumor suppressor), overexpression of mutated Ras (a proto-oncogene), or both, are sufficient for in vitro gliomagenesis, and these genetic traits are associated with their proliferative capacity. An emerging hallmark of cancer is the ability of tumor cells to evade the immune system. Whether specific mutations are related with this, remains to be analyzed. To address this issue, three transformed glioma cell lines were obtained (Rb(-/-), Ras(V12), and Rb(-/-)/Ras(V12)) by in vitro retroviral transformation of astrocytes, as previously reported. In addition, Ras(V12) and Rb(-/-)/Ras(V12) transformed cells were injected into SCID mice and after tumor growth two stable glioma cell lines were derived. All these cells were characterized in terms of Rb and Ras gene expression, morphology, proliferative capacity, expression of MHC I, Rae1δ, and Rae1αβγδε, mult1, H60a, H60b, H60c, as ligands for NK cell receptors, and their susceptibility to NK cell-mediated cytotoxicity. Our results show that transformation of astrocytes (Rb loss, Ras overexpression, or both) induced phenotypical and functional changes associated with resistance to NK cell-mediated cytotoxicity. Moreover, the transfer of cell lines of transformed astrocytes into SCID mice increased resistance to NK cell-mediated cytotoxicity, thus suggesting that specific changes in a tumor suppressor (Rb) and a proto-oncogene (Ras) are enough to confer resistance to NK cell-mediated cytotoxicity in glioma cells and therefore provide some insight into the ability of tumor cells to evade immune responses.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Hsieh, Tien-Hao; Lai, Shih-Ping; Belloche, Arnaud
2016-07-20
The formation mechanism of brown dwarfs (BDs) is one of the long-standing problems in star formation because the typical Jeans mass in molecular clouds is too large to form these substellar objects. To answer this question, it is crucial to study a BD in the embedded phase. IRAS 16253–2429 is classified as a very low-luminosity object (VeLLO) with an internal luminosity of <0.1 L {sub ⊙}. VeLLOs are believed to be very low-mass protostars or even proto-BDs. We observed the jet/outflow driven by IRAS 16253–2429 in CO (2–1), (6–5), and (7–6) using the IRAM 30 m and Atacama Pathfinder Experimentmore » telescopes and the Submillimeter Array (SMA) in order to study its dynamical features and physical properties. Our SMA map reveals two protostellar jets, indicating the existence of a proto-binary system as implied by the precessing jet detected in H{sub 2} emission. We detect a wiggling pattern in the position–velocity diagrams along the jet axes, which is likely due to the binary orbital motion. Based on this information, we derive the current mass of the binary as ∼0.032 M{sub ⊙}. Given the low envelope mass, IRAS 16253–2429 will form a binary that probably consist of one or two BDs. Furthermore, we found that the outflow force as well as the mass accretion rate are very low based on the multi-transition CO observations, which suggests that the final masses of the binary components are at the stellar/substellar boundary. Since IRAS 16253 is located in an isolated environment, we suggest that BDs can form through fragmentation and collapse, similar to low-mass stars.« less
Paleoenvironmental conditions across the Jurassic-Cretaceous boundary in central-eastern Mexico
NASA Astrophysics Data System (ADS)
Martínez-Yáñez, Mario; Núñez-Useche, Fernando; López Martínez, Rafael; Gardner, Rand D.
2017-08-01
The Padni section of central-eastern Mexico is characterized by pelagic, organic-rich carbonates and shales dated in this study by calpionellid biostratigraphy to the late Tithonian-late Berriasian time interval. Microfacies, pyrite framboid size, spectrometric gamma-ray and mineralogical data are herein integrated in order to reconstruct the paleoenvironmental change during the Jurassic-Cretaceous boundary. Deposits of the late Tithonian-early Berriasian are characterized by laminated, organic-rich facies with abundant radiolarian, tiny pyrite framboids and low Th/U ratios. They are linked to upwelling in a semi-restricted basin, high marine productivity and anoxic bottom waters. The early incursions of Tethyan oceanic waters into the proto-Gulf of Mexico occurred during late Tithonian as attested the appearance of calpionellids. Short and intermittent accumulations of saccocomids during early Berriasian suggest episodes of sporadic connection between the Tethys, the proto-Atlantic and the Pacific ocean during sea-level rise events. A full and stable connection between the Tethys and proto-Gulf of Mexico was established until the late Berriasian. This event is supported by the presence of open marine and bioturbated facies with a framboid population typical of dysoxic conditions, higher Th/U ratios and a decreasing pattern of the total organic carbon content. In addition to highlighting the replenishment of the oxygen supply to the basin, this facies also points to a younger age for the finalization of the Yucatán Block rotation and the end of the Gulf of Mexico opening. Deposition of the studied section occurred mostly during a Tithonian-Berriasian arid phase reported in other Tethyan and Atlantic regions. The similarity between the discrete segments of the standard gamma-ray curve defined in the studied outcrop and those reported from subsurface implies their regional continuity allowing their use for correlation purposes.
Liu, Linhua; Ling, Xiaoxuan; Liang, Hairong; Gao, Yuting; Yang, Hui; Shao, Junli; Tang, Huanwen
2012-03-25
Hydroquinone (HQ), one of the most important metabolites derived from benzene, is known to be associated with acute myelogenous leukemia (AML) risk, however, its carcinogenic mechanism remains unclear. In this study, the epigenetic mechanism of HQ exposure was investigated. We characterized the epigenomic response of TK6 cells to HQ exposure, and examined the mRNA expression of DNA methyltransferases (DNMTs) including DNMT1, DNMT3a and DNMT3b, methyl-CpG-binding domain protein 2 (MBD2) and six proto-oncogenes (MPL, RAF1, MYB, MYC, ERBB2 and BRAF). Compared to the control cells, HQ exposure (2.5, 5.0, 10.0 and 20.0 μM for 48 h) resulted in the decrease of DNMTs and MBD2 expression, the global hypomethylation and increase of MPL at mRNA level. Meanwhile, most of these changes were in dose-dependent manner. Moreover, inhibition of DNMTs induced by 5-aza-2'-deoxycytidine (5-AZA), an identified DNMT inhibitor, caused more induction of MPL expression at mRNA level compared to the HQ (10.0 μM) pre-treated group. Furthermore, treatment of HQ potentially led to MPL itself hypomethylation (10.0 and 20.0 μM reduced by 47% and 44%, respectively), further revealing that the activation of proto-oncogene MPL was related to hypomethylation in its DNA sequences. In conclusion, hypomethylation, including global and specific hypomethylation, might be involved in the activation of MPL, and the hypomethylation could be induced by decreased DNMTs in TK6 cells exposed to HQ. Copyright © 2012 Elsevier Ireland Ltd. All rights reserved.
Cooling Flow Spectra in Ginga Galaxy Clusters
NASA Technical Reports Server (NTRS)
White, Raymond E., III
1997-01-01
The primary focus of this research project has been a joint analysis of Ginga LAC and Einstein SSS X-ray spectra of the hot gas in galaxy clusters with cooling flows is reported. We studied four clusters (A496, A1795, A2142 & A2199) and found their central temperatures to be cooler than in the exterior, which is expected from their having cooling flows. More interestingly, we found central metal abundance enhancements in two of the clusters, A496 and A2142. We have been assessing whether the abundance gradients (or lack thereof) in intracluster gas is correlated with galaxy morphological gradients in the host clusters. In rich, dense galaxy clusters, elliptical and SO galaxies are generally found in the cluster cores, while spiral galaxies are found in the outskirts. If the metals observed in clusters came from proto-ellipticals and proto-S0s blowing winds, then the metal distribution in intracluster gas may still reflect the distribution of their former host galaxies. In a research project which was inspired by the success of the Ginga LAC/Einstein SSS work, we analyzed X-ray spectra from the HEAO-A2 MED and the Einstein SSS to look for temperature gradients in cluster gas. The HEAO-A2 MED was also a non-imaging detector with a large field of view compared to the SSS, so we used the differing fields of view of the two instruments to extract spatial information. We found some evidence of cool gas in the outskirts of clusters, which may indicate that the nominally isothermal mass density distributions in these clusters are steepening in the outer parts of these clusters.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Soam, A.; Maheswar, G.; Kwon, Jugmi
2015-04-20
LDN 328 is cited as an example of a fairly isolated clump contracting to form multiple sub-cores, possibly through gravitational fragmentation. In one of these sub-cores, a proto-brown dwarf (L328-IRS) candidate is in the process of formation through the self-gravitating contraction, similar to the formation scenario of a low-mass star. We present results of our optical and near-infrared polarization observations of regions toward LDN 328. This is the first observational attempt to map the magnetic field geometry of a cloud harboring a proto-brown dwarf candidate associated with a sub-parsec-scale molecular outflow. On a parsec scale, the magnetic field is foundmore » to follow the curved structure of the cloud showing a head–tail morphology. The magnetic field is found to be well ordered over a 0.02–0.2 pc scale around L328-IRS. Taking into account the uncertainties in the determination of position angles, the projected angular offset between the magnetic field direction and the outflow axis is found to be in the range of 0°–70°. Considering outflow to be the proxy for the rotation axis, the result obtained in this study implies that the rotation axis in L328 is preferably parallel to the local magnetic field. The magnetic field strength estimated in the close vicinity of L328-IRS is ∼20 μG. Results from the present study suggest that the magnetic field may be playing a vital role even in the cores that are forming sub-stellar sources.« less
Choi, Won-Il; Jeon, Bu-Nam; Park, Hyejin; Yoo, Jung-Yoon; Kim, Yeon-Sook; Koh, Dong-In; Kim, Myung-Hwa; Kim, Yu-Ri; Lee, Choong-Eun; Kim, Kyung-Sup; Osborne, Timothy F; Hur, Man-Wook
2008-10-24
FBI-1 (Pokemon/ZBTB7A) is a proto-oncogenic transcription factor of the BTB/POZ (bric-à-brac, tramtrack, and broad complex and pox virus zinc finger) domain family. Recent evidence suggested that FBI-1 might be involved in adipogenic gene expression. Coincidentally, expression of FBI-1 and fatty-acid synthase (FASN) genes are often increased in cancer and immortalized cells. Both FBI-1 and FASN are important in cancer cell proliferation. SREBP-1 is a major regulator of many adipogenic genes, and FBI-1 and SREBP-1 (sterol-responsive element (SRE)-binding protein 1) interact with each other directly via their DNA binding domains. FBI-1 enhanced the transcriptional activation of SREBP-1 on responsive promoters, pGL2-6x(SRE)-Luc and FASN gene. FBI-1 and SREBP-1 synergistically activate transcription of the FASN gene by acting on the proximal GC-box and SRE/E-box. FBI-1, Sp1, and SREBP-1 can bind to all three SRE, GC-box, and SRE/E-box. Binding competition among the three transcription factors on the GC-box and SRE/E-box appears important in the transcription regulation. FBI-1 is apparently changing the binding pattern of Sp1 and SREBP-1 on the two elements in the presence of induced SREBP-1 and drives more Sp1 binding to the proximal promoter with less of an effect on SREBP-1 binding. The changes induced by FBI-1 appear critical in the synergistic transcription activation. The molecular mechanism revealed provides insight into how proto-oncogene FBI-1 may attack the cellular regulatory mechanism of FASN gene expression to provide more phospholipid membrane components needed for rapid cancer cell proliferation.
Evolution of Earth Like Planets
NASA Astrophysics Data System (ADS)
Monroy-Rodríguez, M. A.; Vega, K. M.
2017-07-01
In order to study and explain the evolution of our own planet we have done a review of works related to the evolution of Earth-like planets. From the stage of proto-planet to the loss of its atmosphere. The planetary formation from the gas and dust of the proto-planetary disk, considering the accretion by the process of migration, implies that the material on the proto-planet is very mixed. The newborn planet is hot and compact, it begins its process of stratification by gravity separation forming a super dense nucleus, an intermediate layer of convective mantle and an upper mantle that is less dense, with material that emerges from zones at very high pressure The surface with low pressure, in this process the planet expands and cools. This process also releases gas to the surface, forming the atmosphere, with the gas gravitationally bounded. The most important thing for the life of the planet is the layer of convective mantle, which produces the magnetic field, when it stops the magnetic field disappears, as well as the rings of van allen and the solar wind evaporates the atmosphere, accelerating the evolution and cooling of the planet. In a natural cycle of cataclysms and mass extinctions, the solar system crosses the galactic disk every 30 million years or so, the increase in the meteorite fall triggers the volcanic activity and the increase in the release of CO2 into the atmosphere reaching critical levels (4000 billion tons) leads us to an extinction by overheating that last 100 000 years, the time it takes CO2 to sediment to the ocean floor. Human activity will lead us to reach critical levels of CO2 in approximately 300 years.
NASA Astrophysics Data System (ADS)
Sokolov, Sergey; Luchitskaya, Marina; Tuchkova, Marianna; Moiseev, Artem; Ledneva, Galina
2013-04-01
Continental margin of Northeastern Asia includes many island arc terranes that differ in age and tectonic position. Two convergent margins are reconstructed for Late Jurassic - Early Cretaceous time: Uda-Murgal and Alazeya - Oloy island arc systems. A long tectonic zone composed of Upper Jurassic to Lower Cretaceous volcanic and sedimentary rocks is recognized along the Asian continent margin from the Mongol-Okhotsk thrust-fold belt on the south to the Chukotka Peninsula on the north. This belt represents the Uda-Murgal arc, which was developed along the convergent margin between Northeastern Asia and Northwestern Meso-Pacific. Several segments are identified in this arc based upon the volcanic and sedimentary rock assemblages, their respective compositions and basement structures. The southern and central parts of the Uda-Murgal island arc system were a continental margin belt with heterogeneous basement represented by metamorphic rocks of the Siberian craton, the Verkhoyansk terrigenous complex of Siberian passive margin and the Koni-Taigonos late Paleozoic to early Mesozoic island arc with accreted oceanic terranes. At the present day latitude of the Pekulney and Chukotka segments there was an ensimatic island arc with relicts of the South Anyui oceanic basin in backarc basin. Alazeya-Oloy island arc systems consists of Paleozoic and Mesozoic complexes that belong to the convergent margin between Northeastern Asia and Proto-Artic Ocean. It separated structures of the North American and Siberian continents. The Siberian margin was active whereas the North American margin was passive. The Late Jurassic was characterized by termination of a spreading in the Proto-Arctic Ocean and transformation of the latter into the closing South Anyui turbidite basin. In the beginning the oceanic lithosphere and then the Chukotka microcontinent had been subducted beneath the Alazeya-Oloy volcanic belt
Askari, Mitra; Darabi, Masoud; Jahanzad, Esa; Mostakhdemian Hosseini, Zahra; Musavi Chavoshi, Marjan; Darabi, Maryam
2015-01-01
Background and aims. Various morphologies are seen in different salivary gland tumorsor within an individual tumor, and the lesions show divers biological behaviors. Experimental results support the hypothesis that increased CrkII proto-oncogene is associated with cytokine-induced tumor initiation and progression by altering cell motility signaling pathway. The aim of this study was to assess the CrkII expression in common malignant salivary gland tumors and pleomorphic ade-noma. Materials and methods. Immunohistochemical analysis of CrkII expression was performed on paraffin blocks of 64 car-cinomas of salivary glands, 10 pleomorphic adenomas, and 10 normal salivary glands. Biopsies were subjected to immu-nostaining with EnVision detection system using monoclonal anti-CrkII. Evaluation of immunoreactivity of CrkII was based on the immunoreaction intensity and percentage of stained tumor cells which were scored semi-quantitatively on a scale with four grades 0 to 3. Kruskal-wallis test and additional Mann-Whitney statistical test were used for analysis of CrkII expression levels. Results. Increased expression of CrkII was seen (P=0.005) in malignant tumors including: mucoepidermoid carcinoma, adenoid cystic carcinoma, and carcinoma ex pleomorphic adenoma, but CrkII expression in acinic cell carcinoma was weak. CrkII expression in pleomorphic adenoma was weak or negative. A weak staining was sparsely seen in normal acinar serous cell. Conclusion. Increased expression of CrkII and its higher intensity of staining in tumors with more aggressive biologic behavior in carcinomas of salivary gland is consistent with a role for this proto-oncogene in salivary gland tumorigenesis and cancer progression.
2013-01-01
Background Blastocystis has been described as the most common intestinal parasite in humans and has an increased impact on public health. However, the transmission of this parasite has not been conclusively determined. Methods To contribute to a better comprehension of the epidemiology of this infection, a cross-sectional survey aimed at providing the first documented data on the prevalence and risk factors associated with Blastocystis infection was carried out among three Orang Asli tribes (Proto-Malay, Negrito and Senoi) in selected villages at Negeri Sembilan, Perak and Pahang, Peninsular Malaysia. Faecal samples were examined by formalin-ether sedimentation and trichrome staining techniques. Results Of 500 individuals, 20.4% (102) were detected positive for Blastocystis; 13.3% (20/150) of Proto-Malays, 21.6% (30/139) of Negritos and 24.7% (52/211) of Senois were positive for Blastocystis, respectively. The positive cases showed a decrease with increasing age and most of the positive cases were observed in individuals less than 15 years old. Multivariate analysis confirmed that drinking untreated water and the presence of other family members infected with Blastocystis were significant risk factors of infection among the three tribes and overall population studied. Conclusion Essentially, the findings highlighted that Blastocystis infection is prevalent among Orang Asli communities in Malaysia. Further studies using molecular approaches to distinguish the subtype of Blastocystis is needed. The present study also revealed that this infection may be transmitted through waterborne and human-to-human contact. Therefore, interventions with the provision of clean water supply for the communities and health education especially to the parents are urgently required. PMID:23433099
Evidence of "Tether-Cutting" Reconnection in the Onset of a Quadrupolar Solar Magnetic Eruption
NASA Technical Reports Server (NTRS)
Choudhary, Debi Prasad; Sterling, Alphonse C.; Moore, Ronald L.; Yurchyshyn, Vasyl
2004-01-01
Extensive study of the near-limb solar filament eruption event on 2000 February 26, involving coronal images from YOHKOH, SOHO EIT and photospheric magnetogram from MID have shown that that both "runaway-tether-cutting-type reconnection" and "fast breakout-type reconnection" may have occurred early in the fast phase of the eruption and may have played an important role in unleashing the explosion (Sterling & Moore 2004). That study did not identify which or if either of these types of reconnection actually triggered the fast phase. Here, together with a magnetogram and He1 10830 A filtergram from NSO/KP, we present Halpha filtergrams from Big Bear Solar Observatory, that show evidence of "tether-cutting-type reconnection" before and during the eruption of the southern filament, situated at one of the neutral lines of the quadrupole magnetic structure.
48 CFR 13.402 - Conditions for use.
Code of Federal Regulations, 2011 CFR
2011-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.402 Conditions for use. If the conditions in paragraphs (a) through (f) of this section are present, the fast payment... purchase. The conditions for use of the fast payment procedure are as follows: (a) Individual purchasing...
48 CFR 13.402 - Conditions for use.
Code of Federal Regulations, 2010 CFR
2010-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.402 Conditions for use. If the conditions in paragraphs (a) through (f) of this section are present, the fast payment... purchase. The conditions for use of the fast payment procedure are as follows: (a) Individual purchasing...
48 CFR 13.402 - Conditions for use.
Code of Federal Regulations, 2013 CFR
2013-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.402 Conditions for use. If the conditions in paragraphs (a) through (f) of this section are present, the fast payment... purchase. The conditions for use of the fast payment procedure are as follows: (a) Individual purchasing...
48 CFR 13.402 - Conditions for use.
Code of Federal Regulations, 2012 CFR
2012-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.402 Conditions for use. If the conditions in paragraphs (a) through (f) of this section are present, the fast payment... purchase. The conditions for use of the fast payment procedure are as follows: (a) Individual purchasing...
48 CFR 13.404 - Contract clause.
Code of Federal Regulations, 2014 CFR
2014-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.404 Contract clause. The contracting officer shall insert the clause at 52.213-1, Fast Payment Procedure, in solicitations and contracts when the conditions in 13.402 are applicable and it is intended that the fast payment...
48 CFR 13.404 - Contract clause.
Code of Federal Regulations, 2010 CFR
2010-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.404 Contract clause. The contracting officer shall insert the clause at 52.213-1, Fast Payment Procedure, in solicitations and contracts when the conditions in 13.402 are applicable and it is intended that the fast payment...
48 CFR 13.404 - Contract clause.
Code of Federal Regulations, 2011 CFR
2011-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.404 Contract clause. The contracting officer shall insert the clause at 52.213-1, Fast Payment Procedure, in solicitations and contracts when the conditions in 13.402 are applicable and it is intended that the fast payment...
48 CFR 13.402 - Conditions for use.
Code of Federal Regulations, 2014 CFR
2014-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.402 Conditions for use. If the conditions in paragraphs (a) through (f) of this section are present, the fast payment... purchase. The conditions for use of the fast payment procedure are as follows: (a) Individual purchasing...
48 CFR 13.404 - Contract clause.
Code of Federal Regulations, 2013 CFR
2013-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.404 Contract clause. The contracting officer shall insert the clause at 52.213-1, Fast Payment Procedure, in solicitations and contracts when the conditions in 13.402 are applicable and it is intended that the fast payment...
48 CFR 13.404 - Contract clause.
Code of Federal Regulations, 2012 CFR
2012-10-01
... AND CONTRACT TYPES SIMPLIFIED ACQUISITION PROCEDURES Fast Payment Procedure 13.404 Contract clause. The contracting officer shall insert the clause at 52.213-1, Fast Payment Procedure, in solicitations and contracts when the conditions in 13.402 are applicable and it is intended that the fast payment...
Costabile, G; Annuzzi, G; Di Marino, L; De Natale, C; Giacco, R; Bozzetto, L; Cipriano, P; Santangelo, C; Masella, R; Rivellese, A A
2011-05-01
Fasting and post-prandial abnormalities of adipose tissue (AT) lipoprotein lipase (LPL) and hormone- sensitive lipase (HSL) activities may have pathophysiological relevance in insulin-resistant conditions. The aim of this study was to evaluate activity and gene expression of AT LPL and HSL at fasting and 6 h after meal in two insulin-resistant groups - obese with Type 2 diabetes and obese without diabetes - and in non-diabetic normal-weight controls. Nine obese subjects with diabetes, 10 with obesity alone, and 9 controls underwent measurements of plasma levels of glucose, insulin, and triglycerides before and after a standard fat-rich meal. Fasting and post-prandial (6 h) LPL and HSL activities and gene expressions were determined in abdominal subcutaneous AT needle biopsies. The diabetic obese subjects had significantly lower fasting and post-prandial AT heparin-releasable LPL activity than only obese and control subjects (p<0.05) as well as lower mRNA LPL levels. HSL activity was significantly reduced in the 2 groups of obese subjects compared to controls in both fasting condition and 6 h after the meal (p<0.05), while HSL mRNA levels were not different. There were no significant changes between fasting and 6 h after meal measurements in either LPL or HSL activities and gene expressions. Lipolytic activities in AT are differently altered in obesity and Type 2 diabetes being HSL alteration associated with both insulin-resistant conditions and LPL with diabetes per se. These abnormalities are similarly observed in the fasting condition and after a fat-rich meal.
Bidshahri, Roza; Attali, Dean; Fakhfakh, Kareem; McNeil, Kelly; Karsan, Aly; Won, Jennifer R; Wolber, Robert; Bryan, Jennifer; Hughesman, Curtis; Haynes, Charles
2016-03-01
A need exists for robust and cost-effective assays to detect a single or small set of actionable point mutations, or a complete set of clinically informative mutant alleles. Knowledge of these mutations can be used to alert the clinician to a rare mutation that might necessitate more aggressive clinical monitoring or a personalized course of treatment. An example is BRAF, a (proto)oncogene susceptible to either common or rare mutations in codon V600 and adjacent codons. We report a diagnostic technology that leverages the unique capabilities of droplet digital PCR to achieve not only accurate and sensitive detection of BRAF(V600E) but also all known somatic point mutations within the BRAF V600 codon. The simple and inexpensive two-well droplet digital PCR assay uses a chimeric locked nucleic acid/DNA probe against wild-type BRAF and a novel wild-type-negative screening paradigm. The assay shows complete diagnostic accuracy when applied to formalin-fixed, paraffin-embedded tumor specimens from metastatic colorectal cancer patients deficient for Mut L homologue-1. Copyright © 2016 American Society for Investigative Pathology and the Association for Molecular Pathology. Published by Elsevier Inc. All rights reserved.
Normal fasting plasma glucose levels and type 2 diabetes in young men.
Tirosh, Amir; Shai, Iris; Tekes-Manova, Dorit; Israeli, Eran; Pereg, David; Shochat, Tzippora; Kochba, Ilan; Rudich, Assaf
2005-10-06
The normal fasting plasma glucose level was recently defined as less than 100 mg per deciliter (5.55 mmol per liter). Whether higher fasting plasma glucose levels within this range independently predict type 2 diabetes in young adults is unclear. We obtained blood measurements, data from physical examinations, and medical and lifestyle information from men in the Israel Defense Forces who were 26 to 45 years of age. A total of 208 incident cases of type 2 diabetes occurred during 74,309 person-years of follow-up (from 1992 through 2004) among 13,163 subjects who had baseline fasting plasma glucose levels of less than 100 mg per deciliter. A multivariate model, adjusted for age, family history of diabetes, body-mass index, physical-activity level, smoking status, and serum triglyceride levels, revealed a progressively increased risk of type 2 diabetes in men with fasting plasma glucose levels of 87 mg per deciliter (4.83 mmol per liter) or more, as compared with those whose levels were in the bottom quintile (less than 81 mg per deciliter [4.5 mmol per liter], P for trend <0.001). In multivariate models, men with serum triglyceride levels of 150 mg per deciliter (1.69 mmol per liter) or more, combined with fasting plasma glucose levels of 91 to 99 mg per deciliter (5.05 to 5.50 mmol per liter), had a hazard ratio of 8.23 (95 percent confidence interval, 3.6 to 19.0) for diabetes, as compared with men with a combined triglyceride level of less than 150 mg per deciliter and fasting glucose levels of less than 86 mg per deciliter (4.77 mmol per liter). The joint effect of a body-mass index (the weight in kilograms divided by the square of the height in meters) of 30 or more and a fasting plasma glucose level of 91 to 99 mg per deciliter resulted in a hazard ratio of 8.29 (95 percent confidence interval, 3.8 to 17.8), as compared with a body-mass index of less than 25 and a fasting plasma glucose level of less than 86 mg per deciliter. Higher fasting plasma glucose levels within the normoglycemic range constitute an independent risk factor for type 2 diabetes among young men, and such levels may help, along with body-mass index and triglyceride levels, to identify apparently healthy men at increased risk for diabetes. Copyright 2005 Massachusetts Medical Society.
Alabbood, Majid H; Ho, Kenneth W; Simons, Mary R
Ramadan fasting is one of the five pillars of Islam. People with diabetes are exempted from fasting according to Islamic rules. However, many people with diabetes wish to fast. Physicians are asked frequently by their patients about their ability to fast and the possible impact of fasting on their glycaemic control. Studies about the effect of Ramadan on people with insulin-treated diabetes are scarce. This review aims to provide clinicians with the best recommendations for their patients with insulin-treated diabetes who wish to fast. Four databases (Medline, EMBASE, Scopus and PubMed) were searched using the following MeSH terms and keywords: "insulin dependent diabetes mellitus", "type 1 diabetes mellitus", 'Ramadan' "and" "fasting". In addition, a hand search of key journals and reference lists was performed. Sixteen full text articles were selected for review and critical analysis. All of the included studies except one found improvement or no change in glycaemic control parameters during Ramadan fasting. The incidence of major complications were negligible. Minor hypoglycaemic events were reported in some studies but did not adversely affect fasting. Postprandial hyperglycaemia was a major concern in other studies. However, the incidence of severe hyperglycaemia and diabetic ketoacidosis were trivial. Ramadan fasting is feasible for insulin dependent diabetic patient who wish to fast. Clinicians should advise their patients about the importance of adequate glycaemic control before Ramadan and frequent glucose monitoring during fasting. Certain types of Insulin seem to be more beneficial than other. Copyright © 2016 Diabetes India. Published by Elsevier Ltd. All rights reserved.
Slavic Languages: A Condensed Survey.
ERIC Educational Resources Information Center
Jakobson, Roman
This study examines the geographic distribution of 13 eastern, western, and southern Slavic languages. Commentary on the expansion of Proto-Slavic precedes a brief history of the Slavic literary languages. Separate sections on comparative phonology and comparative grammar are included. A selected bibliography, classified by subject, concludes this…
Room temperature vortex fluidic synthesis of monodispersed amorphous proto-vaterite.
Peng, Wenhong; Chen, Xianjue; Zhu, Shenmin; Guo, Cuiping; Raston, Colin L
2014-10-11
Monodispersed particles of amorphous calcium carbonate (ACC) 90 to 200 nm in diameter are accessible at room temperature in ethylene glycol and water using a vortex fluidic device (VFD). The ACC material is stable for at least two weeks under ambient conditions.
Proto-jet configurations in RADs orbiting a Kerr SMBH: symmetries and limiting surfaces
NASA Astrophysics Data System (ADS)
Pugliese, D.; Stuchlík, Z.
2018-05-01
Ringed accretion disks (RADs) are agglomerations of perfect-fluid tori orbiting around a single central attractor that could arise during complex matter inflows in active galactic nuclei. We focus our analysis to axi-symmetric accretion tori orbiting in the equatorial plane of a supermassive Kerr black hole; equilibrium configurations, possible instabilities, and evolutionary sequences of RADs were discussed in our previous works. In the present work we discuss special instabilities related to open equipotential surfaces governing the material funnels emerging at various regions of the RADs, being located between two or more individual toroidal configurations of the agglomerate. These open structures could be associated to proto-jets. Boundary limiting surfaces are highlighted, connecting the emergency of the jet-like instabilities with the black hole dimensionless spin. These instabilities are observationally significant for active galactic nuclei, being related to outflows of matter in jets emerging from more than one torus of RADs orbiting around supermassive black holes.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Ginsburg, A.; Bally, J.; Battersby, C.
We search the {lambda} = 1.1 mm Bolocam Galactic Plane Survey for clumps containing sufficient mass to form {approx}10{sup 4} M{sub Sun} star clusters. Eighteen candidate massive proto-clusters are identified in the first Galactic quadrant outside of the central kiloparsec. This sample is complete to clumps with mass M{sub clump} > 10{sup 4} M{sub Sun} and radius r {approx}< 2.5 pc. The overall Galactic massive cluster formation rate is CFR(M{sub cluster} > 10{sup 4}) {approx}<5 Myr{sup -1}, which is in agreement with the rates inferred from Galactic open clusters and M31 massive clusters. We find that all massive proto-clusters inmore » the first quadrant are actively forming massive stars and place an upper limit of {tau}{sub starless} < 0.5 Myr on the lifetime of the starless phase of massive cluster formation. If massive clusters go through a starless phase with all of their mass in a single clump, the lifetime of this phase is very short.« less
Self: an adaptive pressure arising from self-organization, chaotic dynamics, and neural Darwinism.
Bruzzo, Angela Alessia; Vimal, Ram Lakhan Pandey
2007-12-01
In this article, we establish a model to delineate the emergence of "self" in the brain making recourse to the theory of chaos. Self is considered as the subjective experience of a subject. As essential ingredients of subjective experiences, our model includes wakefulness, re-entry, attention, memory, and proto-experiences. The stability as stated by chaos theory can potentially describe the non-linear function of "self" as sensitive to initial conditions and can characterize it as underlying order from apparently random signals. Self-similarity is discussed as a latent menace of a pathological confusion between "self" and "others". Our test hypothesis is that (1) consciousness might have emerged and evolved from a primordial potential or proto-experience in matter, such as the physical attractions and repulsions experienced by electrons, and (2) "self" arises from chaotic dynamics, self-organization and selective mechanisms during ontogenesis, while emerging post-ontogenically as an adaptive pressure driven by both volume and synaptic-neural transmission and influencing the functional connectivity of neural nets (structure).
Primitive bodies - Molecular abundances in Comet Halley as probes of cometary formation environments
NASA Technical Reports Server (NTRS)
Lunine, Jonathan I.
1989-01-01
The most recent results on abundances of molecules in Halley's comet are examined in the context of various models for the environment in which comets formed. These environments include molecular clouds associated with star-forming regions, the solar nebula, gaseous disks around proto-planets, and combinations of these. Of all constituents in a cometary nucleus, the highly volatile molecules such as methane, ammonia, molecular nitrogen, and carbon monoxide are most sensitive to the final episode of cometary grain formation and incorporation in the comet's nucleus; hence they likely reflect at least some chemical processing in the solar nebula. Proper interpretation requires modeling of a number of physical processes including gas phase chemistry, chemistry on grain surfaces, and fractionation effects resulting from preferential incorporation of certain gases in proto-cometary grains. The abundance of methane in Halley's comet could be a key indicator of where that comet formed, provided the methane abundance on grains in star-forming regions can be observationally constrained.
Origins of life and biochemistry under high-pressure conditions.
Daniel, Isabelle; Oger, Philippe; Winter, Roland
2006-10-01
Life on Earth can be traced back to as far as 3.8 billion years (Ga) ago. The catastrophic meteoritic bombardment ended between 4.2 and 3.9 Ga ago. Therefore, if life emerged, and we know it did, it must have emerged from nothingness in less than 400 million years. The most recent scenarios of Earth accretion predict some very unstable physico-chemical conditions at the surface of Earth, which, in such a short time period, would impede the emergence of life from a proto-biotic soup. A possible alternative would be that life originated in the depth of the proto-ocean of the Hadean Earth, under high hydrostatic pressure. The large body of water would filter harmful radiation and buffer physico-chemical variations, and therefore would provide a more stable radiation-free environment for pre-biotic chemistry. After a short introduction to Earth history, the current tutorial review presents biological and physico-chemical arguments in support of high-pressure origin for life on Earth.
Thapa, Narendra; Choi, Suyong; Hedman, Andrew; Tan, Xiaojun; Anderson, Richard A.
2013-01-01
A fundamental property of tumor cells is to defy anoikis, cell death caused by a lack of cell-matrix interaction, and grow in an anchorage-independent manner. How tumor cells organize signaling molecules at the plasma membrane to sustain oncogenic signals in the absence of cell-matrix interactions remains poorly understood. Here, we describe a role for phosphatidylinositol 4-phosphate 5-kinase (PIPK) Iγi2 in controlling anchorage-independent growth of tumor cells in coordination with the proto-oncogene Src. PIPKIγi2 regulated Src activation downstream of growth factor receptors and integrins. PIPKIγi2 directly interacted with the C-terminal tail of Src and regulated its subcellular localization in concert with talin, a cytoskeletal protein targeted to focal adhesions. Co-expression of PIPKIγi2 and Src synergistically induced the anchorage-independent growth of nonmalignant cells. This study uncovers a novel mechanism where a phosphoinositide-synthesizing enzyme, PIPKIγi2, functions with the proto-oncogene Src, to regulate oncogenic signaling. PMID:24151076
Radiative Transfer Modeling in Proto-planetary Disks
NASA Astrophysics Data System (ADS)
Kasper, David; Jang-Condell, Hannah; Kloster, Dylan
2016-01-01
Young Stellar Objects (YSOs) are rich astronomical research environments. Planets form in circumstellar disks of gas and dust around YSOs. With ever increasing capabilities of the observational instruments designed to look at these proto-planetary disks, most notably GPI, SPHERE, and ALMA, more accurate interfaces must be made to connect modeling of the disks with observation. PaRTY (Parallel Radiative Transfer in YSOs) is a code developed previously to model the observable density and temperature structure of such a disk by self-consistently calculating the structure of the disk based on radiative transfer physics. We present upgrades we are implementing to the PaRTY code to improve its accuracy and flexibility. These upgrades include: creating a two-sided disk model, implementing a spherical coordinate system, and implementing wavelength-dependent opacities. These upgrades will address problems in the PaRTY code of infinite optical thickness, calculation under/over-resolution, and wavelength-independent photon penetration depths, respectively. The upgraded code will be used to better model disk perturbations resulting from planet formation.
Coevolution of CRISPR bacteria and phage in 2 dimensions
NASA Astrophysics Data System (ADS)
Han, Pu; Deem, Michael
2014-03-01
CRISPR (cluster regularly interspaced short palindromic repeats) is a newly discovered adaptive, heritable immune system of prokaryotes. It can prevent infection of prokaryotes by phage. Most bacteria and almost all archae have CRISPR. The CRISPR system incorporates short nucleotide sequences from viruses. These incorporated sequences provide a historical record of the host and predator coevolution. We simulate the coevolution of bacteria and phage in 2 dimensions. Each phage has multiple proto-spacers that the bacteria can incorporate. Each bacterium can store multiple spacers in its CRISPR. Phages can escape recognition by the CRISPR system via point mutation or recombination. We will discuss the different evolutionary consequences of point mutation or recombination on the coevolution of bacteria and phage. We will also discuss an intriguing ``dynamic phase transition'' in the number of phage as a function of time and mutation rate. We will show that due to the arm race between phages and bacteria, the frequency of spacers and proto-spacers in a population can oscillate quite rapidly.
NASA Astrophysics Data System (ADS)
Kim, Hyunjun; Parsons, Stephen; Hopwood, Jeffrey
2018-01-01
A proto-metamaterial structure creates periodic microplasma in three-dimensions within a sub-wavelength volume. A typical implementation consists of a 3 × 3 × 3 rectangular array of 2.4 GHz split ring resonators with each resonator’s split forming a 150 μm discharge gap. All 27 plasmas can be simultaneously ignited in argon up to 260 Torr and sustained by 50 W of radiation power at 650 Torr. Periodic microplasma formation alters the original properties of the material as demonstrated by the electromagnetic transmission spectra between 2.1 and 2.6 GHz with and without plasma. The average electron density of microplasmas at 650 Torr is estimated to be 2-5 × 1019 m-3 by comparing simulated and measured microwave transmission spectra. In addition, both simulation and experimental results demonstrate that the spatial variation of plasma is configurable according to coupled mode theory. Therefore, this structure allows spatially adjustable plasma creation through frequency-selective electromagnetic coupling.
Singbrant, Sofie; Wall, Meaghan; Moody, Jennifer; Karlsson, Göran; Chalk, Alistair M; Liddicoat, Brian; Russell, Megan R; Walkley, Carl R; Karlsson, Stefan
2014-04-01
The proto-oncogene SKI is highly expressed in human myeloid leukemia and also in murine hematopoietic stem cells. However, its operative relevance in these cells remains elusive. We have over-expressed SKI to define its intrinsic role in hematopoiesis and myeloid neoplasms, which resulted in a robust competitive advantage upon transplantation, a complete dominance of the stem and progenitor compartments, and a marked enhancement of myeloid differentiation at the expense of other lineages. Accordingly, enforced expression of SKI induced a gene signature associated with hematopoietic stem cells and myeloid differentiation, as well as hepatocyte growth factor signaling. Here we demonstrate that, in contrast to what has generally been assumed, the significant impact of SKI on hematopoiesis is independent of its ability to inhibit TGF-beta signaling. Instead, myeloid progenitors expressing SKI are partially dependent on functional hepatocyte growth factor signaling. Collectively our results demonstrate that SKI is an important regulator of hematopoietic stem cell activity and its overexpression leads to myeloproliferative disease.
Kumar, Sudhir; Stecher, Glen; Peterson, Daniel; Tamura, Koichiro
2012-10-15
There is a growing need in the research community to apply the molecular evolutionary genetics analysis (MEGA) software tool for batch processing a large number of datasets and to integrate it into analysis workflows. Therefore, we now make available the computing core of the MEGA software as a stand-alone executable (MEGA-CC), along with an analysis prototyper (MEGA-Proto). MEGA-CC provides users with access to all the computational analyses available through MEGA's graphical user interface version. This includes methods for multiple sequence alignment, substitution model selection, evolutionary distance estimation, phylogeny inference, substitution rate and pattern estimation, tests of natural selection and ancestral sequence inference. Additionally, we have upgraded the source code for phylogenetic analysis using the maximum likelihood methods for parallel execution on multiple processors and cores. Here, we describe MEGA-CC and outline the steps for using MEGA-CC in tandem with MEGA-Proto for iterative and automated data analysis. http://www.megasoftware.net/.
Confinement of nonneutral plasmas in the Prototype Ring Trap device
NASA Astrophysics Data System (ADS)
Himura, Haruhiko; Yoshida, Zensho; Nakashima, Chihiro; Morikawa, Junji; Kakuno, Hidekazu; Tahara, Shigeru; Shibayama, Norihisa
1999-12-01
Recently, an internal-ring device named Proto-RT (Prototype Ring Trap) was constructed at University of Tokyo, and experiments on the device have been intensively conducted. The main goal of Proto-RT is to explore an innovative method to attain a plasma equilibrium with extremely high-β (β>1) in a toroidal geometry using non-neutral condition. At the first series of the experiments, pure electron plasmas (ne˜1013m-3) have been successfully confined inside a separatrix. No disruption is so far observed. The confinement time of the electron plasmas is of order 0.1 ms for an X point configuration. The non-neutrality of Δne˜1013m-3 is already beyond the critical value which is required to produce an enough self-electric field E in non-neutral plasmas with n0˜1019m-3, causing a strong E×B flow thoroughly over the plasmas where the hydrodynamic pressure of the flow is predicted to balance with the thermal pressure of the plasmas.
Singbrant, Sofie; Wall, Meaghan; Moody, Jennifer; Karlsson, Göran; Chalk, Alistair M.; Liddicoat, Brian; Russell, Megan R.; Walkley, Carl R.; Karlsson, Stefan
2014-01-01
The proto-oncogene SKI is highly expressed in human myeloid leukemia and also in murine hematopoietic stem cells. However, its operative relevance in these cells remains elusive. We have over-expressed SKI to define its intrinsic role in hematopoiesis and myeloid neoplasms, which resulted in a robust competitive advantage upon transplantation, a complete dominance of the stem and progenitor compartments, and a marked enhancement of myeloid differentiation at the expense of other lineages. Accordingly, enforced expression of SKI induced a gene signature associated with hematopoietic stem cells and myeloid differentiation, as well as hepatocyte growth factor signaling. Here we demonstrate that, in contrast to what has generally been assumed, the significant impact of SKI on hematopoiesis is independent of its ability to inhibit TGF-beta signaling. Instead, myeloid progenitors expressing SKI are partially dependent on functional hepatocyte growth factor signaling. Collectively our results demonstrate that SKI is an important regulator of hematopoietic stem cell activity and its overexpression leads to myeloproliferative disease. PMID:24415629
DOE Office of Scientific and Technical Information (OSTI.GOV)
Goulding, Richard Howell; Caughman, John B.; Rapp, Juergen
Proto-MPEX is a linear plasma device being used to study a novel RF source concept for the planned Material Plasma Exposure eXperiment (MPEX), which will address plasma-materials interaction (PMI) for nuclear fusion reactors. Plasmas are produced using a large diameter helicon source operating at a frequency of 13.56 MHz at power levels up to 120 kW. In recent experiments the helicon source has produced deuterium plasmas with densities up to ~6 × 1019 m–3 measured at a location 2 m downstream from the antenna and 0.4 m from the target. Previous plasma production experiments on Proto-MPEX have generated lower densitymore » plasmas with hollow electron temperature profiles and target power deposition peaked far off axis. The latest experiments have produced flat Te profiles with a large portion of the power deposited on the target near the axis. This and other evidence points to the excitation of a helicon mode in this case.« less
Diabetes Canada Position Statement for People with Types 1 and 2 Diabetes Who Fast During Ramadan.
Bajaj, Harpreet Singh; Abouhassan, Tyceer; Ahsan, Muhammad Rauf; Arnaout, Amel; Hassanein, Mohamed; Houlden, Robyn L; Khan, Tayyab; Khandwala, Hasnain; Verma, Subodh
2018-04-27
Fasting from dawn to dusk during Ramadan, including abstaining from water and food, is 1 of the pillars of Islam and is observed by the majority of Muslims. Most research concerning diabetes and fasting during Ramadan originates from Middle Eastern or South Asian countries; however, differences exist in hours of work and fasting, pharmacotherapy and blood glucose monitoring between these countries and Canada. An expert forum of 7 Canadian experts and 1 international expert collaborated to develop Canadian guidelines using the same evidence-based principles, with the exception of an independent methods review used for the Diabetes Canada clinical practice guidelines. Diabetes Canada scientific leadership and Canadian health-care providers performed independent external reviews. Religious leaders endorsed the position statement and provided letters of support. An informed patient participated in the position-statement development. Each recommendation was approved with 100% consensus of the expert forum. Recommendations for risk stratification, education, pharmacotherapy and blood glucose monitoring for adults with type 1 and type 2 diabetes who intend to fast during Ramadan have been developed. This is the first Canadian position statement on the topic of Ramadan fasting and diabetes. It was developed by an expert faculty and endorsed by Diabetes Canada, and provides guidance about pharmacotherapy and glucose monitoring for health-care providers so that they can assist Canadian Muslims living with diabetes to observe fasting during Ramadan safely. Copyright © 2018. Published by Elsevier Inc.
Bakiner, Okan; Ertorer, Melek E; Bozkirli, Emre; Tutuncu, Neslihan B; Demirag, Nilgun G
2009-03-01
Aim of this prospective study is to evaluate the effect of repaglinide t.i.d. (three times a day) plus single-dose insulin glargine regimen in low-risk type 2 diabetic patients during Ramadan fasting. Participants had been taking the regimen for at least 3 months. Patients with a history of diabetic coma, severe hypoglycemic crisis or repeating attacks of hypoglycemia were excluded. Hypoglycemic unawareness, kidney or liver disease or HbA1c over 8% were also accepted as exclusion criteria. Eleven patients who insisted on this worship and eight non-fasting cases were involved. All were told to make home-glucose-monitorisation weekly and report any hypoglycemic event throughout Ramadan. Fasting blood glucose (FBG), post-prandial blood glucose (PBG) and fructosamine levels, body weights and blood pressures were recorded just before and after Ramadan. Seven patients in each group concluded the follow-up. Any significant change was detected in the parameters in either groups (P>0.05). Glucose control remained unchanged; fructosamine 318.14+/-65.38 versus 317.28+/-52.80 mmol/L in fasting group, 290.71+/-38.48 versus 290+/-38.56 mmol/L in non-fasting group. None of them exhibited either a major or a minor hypoglycemic event. The results of this pilot study indicated that repaglinide t.i.d. plus single-dose insulin glargine regimen was safe for low-risk type 2 diabetic patients who insisted on fasting during Ramadan.
Khalangot, Mykola; Krasnienkov, Dmytro; Vaiserman, Alexander; Avilov, Ivan; Kovtun, Volodymir; Okhrimenko, Nadia; Koliada, Alexander; Kravchenko, Victor
2017-04-01
Type 2 diabetes mellitus is characterized by shorter leukocyte telomere length, but the relationship between leukocyte telomere length and type 2 diabetes mellitus development is rather questioned. Fasting and post-load glycaemia associated with different types of insulin resistance and their relation with leukocyte telomere length remains unknown. We compared leukocyte telomere length and fasting or post-load glucose levels in persons who do not receive glucose lowering treatment. For 82 randomly selected rural residents of Ukraine, aged 45+, not previously diagnosed with type 2 diabetes mellitus, the WHO oral glucose tolerance test and anthropometric measurements were performed. Leukocyte telomere length was measured by standardized method of quantitative monochrome multiplex polymerase chain reaction in real time. Spearman's or Pearson's rank correlation was used for correlation analysis between fasting plasma glucose or 2-h post-load plasma glucose levels and leukocyte telomere length. Logistical regression models were used to evaluate risks of finding short or long telomeres associated with fasting plasma glucose or 2-h post-load plasma glucose levels. No association of fasting plasma glucose and leukocyte telomere length was revealed, whereas 2-h post-load plasma glucose levels demonstrated a negative correlation ( P < 0.01) with leukocyte telomere length. Waist circumference and systolic blood pressure were negatively related ( P = 0.03) with leukocyte telomere length in men. Oral glucose tolerance test result-based glycemic categories did not show differences between mean leukocyte telomere length in categories of normal fasting plasma glucose and 2-h post-load plasma glucose (NGT, n = 33); diabetes mellitus (DM), n = 18 and impaired fasting glucose/tolerance (IFG/IGT, n = 31) levels. A correlation relationship between leukocyte telomere length and 2-h post-load plasma glucose level in NGT; IFG/IGT and DM groups ( P = 0.027; 0.029 and 0.049, respectively) was revealed; the association between leukocyte telomere length and fasting plasma glucose was confirmed in DM group only ( P = 0.009). Increase of 2-h post-load plasma glucose (but not fasting plasma glucose) level improves the chances of revealing short telomeres: OR 1.52 (95% CI 1.04-2.22), P = 0.03. After the adjustment for age, gender, waist circumference, systolic blood pressure, and fasting plasma glucose, these phenomena remain significant. We conclude that 2-h post-load plasma glucose but not fasting plasma glucose is inversely associated with leukocyte telomere length. Impact statement • Contradictory epidemiologic data have been obtained about the link between the leucocyte telomere length (LTL) and diabetes. Type 2 diabetes (T2D) is likely to be pathophysiologically heterogeneous, but comparison of the association of LTL separately with fasting plasma glucose (FPG) and 2-h post-load plasma glucose (2hPG) levels has not been done before. Thus, the study of LTL changes associated with different types of hyperglycaemia, that largely determine the heterogenity of T2D is important. • In a population-based study of rural Ukrainians, we were the first to demonstrate that the increase of 2hPG (but not FPG) level increases the chances of revealing short telomeres. • The obtained data can help to clarify the relationship between the LTL shortening and different conditions of the insulin resistance (mainly liver resistance in high FPG and mostly muscle and adipose tissue resistance in high 2hPG).
Catalytic fast pyrolysis of white oak wood in-situ using a bubbling fluidized bed reactor
USDA-ARS?s Scientific Manuscript database
Catalytic fast pyrolysis was performed on white oak wood using two zeolite-type catalysts as bed material in a bubbling fluidized bed reactor. The two catalysts chosen, based on a previous screening study, were Ca2+ exchanged Y54 (Ca-Y54) and a proprietary ß-zeolite type catalyst (catalyst M) both ...
Formation of nanocarbon spheres by thermal treatment of woody char from fast pyrolysis process
Qiangu Yan; Hossein Toghiani; Zhiyong Cai; Jilei Zhang
2014-01-01
Influences of thermal treatment conditions of temperature, reaction cycle and time, and purge gas type on nanocarbon formation over bio-chars from fast pyrolysis and effects of thermal reaction cycle and purge gas type on bio-char surface functional groups were investigated by temperature-programmed desorption (TPD) and temperature programmed reduction methods....
Ruijgrok, Carolien; Dekker, Jacqueline M; Beulens, Joline W; Brouwer, Ingeborg A; Coupé, Veerle M H; Heymans, Martijn W; Sijtsma, Femke P C; Mela, David J; Zock, Peter L; Olthof, Margreet R; Alssema, Marjan
2018-01-01
Glycaemic markers and fasting insulin are frequently measured outcomes of intervention studies. To extrapolate accurately the impact of interventions on the risk of diabetes incidence, we investigated the size and shape of the associations of fasting plasma glucose (FPG), 2 h post-load glucose (2hPG), HbA 1c , fasting insulin and HOMA-IR with incident type 2 diabetes mellitus. The study population included 1349 participants aged 50-75 years without diabetes at baseline (1989) from a population-based cohort in Hoorn, the Netherlands. Incident type 2 diabetes was defined by the WHO 2011 criteria or known diabetes at follow-up. Logistic regression models were used to determine the associations of the glycaemic markers, fasting insulin and HOMA-IR with incident type 2 diabetes. Restricted cubic spline logistic regressions were conducted to investigate the shape of the associations. After a mean follow-up duration of 6.4 (SD 0.5) years, 152 participants developed diabetes (11.3%); the majority were screen detected by high FPG. In multivariate adjusted models, ORs (95% CI) for incident type 2 diabetes for the highest quintile in comparison with the lowest quintile were 9.0 (4.4, 18.5) for FPG, 6.1 (2.9, 12.7) for 2hPG, 3.8 (2.0, 7.2) for HbA 1c , 1.9 (0.9, 3.6) for fasting insulin and 2.8 (1.4, 5.6) for HOMA-IR. The associations of FPG and HbA 1c with incident diabetes were non-linear, rising more steeply at higher values. FPG was most strongly associated with incident diabetes, followed by 2hPG, HbA 1c , HOMA-IR and fasting insulin. The strong association with FPG is probably because FPG is the most frequent marker for diabetes diagnosis. Non-linearity of associations between glycaemic markers and incident type 2 diabetes should be taken into account when estimating future risk of type 2 diabetes based on glycaemic markers.
Furitsu, T; Tsujimura, T; Tono, T; Ikeda, H; Kitayama, H; Koshimizu, U; Sugahara, H; Butterfield, J H; Ashman, L K; Kanayama, Y
1993-01-01
The c-kit proto-oncogene encodes a receptor tyrosine kinase. Binding of c-kit ligand, stem cell factor (SCF) to c-kit receptor (c-kitR) is known to activate c-kitR tyrosine kinase, thereby leading to autophosphorylation of c-kitR on tyrosine and to association of c-kitR with substrates such as phosphatidylinositol 3-kinase (PI3K). In a human mast cell leukemia cell line HMC-1, c-kitR was found to be constitutively phosphorylated on tyrosine, activated, and associated with PI3K without the addition of SCF. The expression of SCF mRNA transcript in HMC-1 cells was not detectable by means of PCR after reverse transcription (RT-PCR) analysis, suggesting that the constitutive activation of c-kitR was ligand independent. Sequencing of whole coding region of c-kit cDNA revealed that c-kit genes of HMC-1 cells were composed of a normal, wild-type allele and a mutant allele with two point mutations resulting in intracellular amino acid substitutions of Gly-560 for Val and Val-816 for Asp. Amino acid sequences in the regions of the two mutations are completely conserved in all of mouse, rat, and human c-kit. In order to determine the causal role of these mutations in the constitutive activation, murine c-kit mutants encoding Gly-559 and/or Val-814, corresponding to human Gly-560 and/or Val-816, were constructed by site-directed mutagenesis and expressed in a human embryonic kidney cell line, 293T cells. In the transfected cells, both c-kitR (Gly-559, Val-814) and c-kitR (Val-814) were abundantly phosphorylated on tyrosine and activated in immune complex kinase reaction in the absence of SCF, whereas tyrosine phosphorylation and activation of c-kitR (Gly-559) or wild-type c-kitR was modest or little, respectively. These results suggest that conversion of Asp-816 to Val in human c-kitR may be an activating mutation and responsible for the constitutive activation of c-kitR in HMC-1 cells. Images PMID:7691885
NTRK fusion oncogenes in pediatric papillary thyroid carcinoma in northeast United States.
Prasad, Manju L; Vyas, Monika; Horne, Matthew J; Virk, Renu K; Morotti, Raffaella; Liu, Zongzhi; Tallini, Giovanni; Nikiforova, Marina N; Christison-Lagay, Emily R; Udelsman, Robert; Dinauer, Catherine A; Nikiforov, Yuri E
2016-04-01
An increase in thyroid cancers, predominantly papillary thyroid carcinoma (PTC), has been recently reported in children. The histopathology of 28 consecutive PTCs from the northeast United States was reviewed. None of the patients (ages 6-18 years; 20 females, 8 males) had significant exposure to radiation. Nucleic acid from tumors was tested for genetic abnormalities (n = 27). Negative results were reevaluated by targeted next-generation sequencing. Seven of 27 PTCs (26%) had neurotrophic tyrosine kinase receptor (NTRK) fusion oncogenes (NTRK type 3/ets variant 6 [NTRK3/ETV6], n =5; NTRK3/unknown, n = 1; and NTRK type 1/translocated promoter region, nuclear basket protein [NTRK1/TPR], n = 1), including 5 tumors that measured >2 cm and 3 that diffusely involved the entire thyroid or lobe. All 7 tumors had lymphatic invasion, and 5 had vascular invasion. Six of 27 PTCs (22%) had ret proto-oncogene (RET) fusions (RET/PTC1, n = 5; RET/PTC3, n = 1); 2 tumors measured >2 cm and diffusely involved the thyroid, and 5 had lymphatic invasion, with vascular invasion in 2. Thirteen PTCs had the B-Raf proto-oncogene, serine/threonine kinase (BRAF) valine-to-glutamic acid mutation at position 600 (BRAF(V) (600E)) (13 of 27 tumors; 48%), 11 measured <2 cm, and 6 had lymphatic invasion (46%), with vascular invasion in 3. Fusion oncogene tumors, compared with BRAF(V) (600E) PTCs, were associated with large size (mean, 2.2 cm vs 1.5 cm, respectively; P = .05), solid and diffuse variants (11 of 13 vs 0 of 13 tumors, respectively; P < .001), and lymphovascular invasion (12 of 13 vs 6 of 13 tumors, respectively; P = .02); BRAF(V) (600E) PTCs were predominantly the classic variant (12 of 13 vs 1 of 13 tumors). Two tumors metastasized to the lung, and both had fusion oncogenes (NTRK1/TPR, n = 1; RET/PTC1, n = 1). Fusion oncogene PTC presents with more extensive disease and aggressive pathology than BRAF(V) (600E) PTC in the pediatric population. The high prevalence of the NTRK1/NTRK3 fusion oncogene PTCs in the United States is unusual and needs further investigation. © 2016 American Cancer Society.
Kim, Minjoo; Kim, Minkyung; Huang, Limin; Jee, Sun Ha; Lee, Jong Ho
2018-05-18
We tested the hypothesis that the cumulative effects of common genetic variants related to elevated fasting glucose are collectively associated with oxidative stress. Using 25 single nucleotide polymorphisms (SNPs), a weighted genetic risk score (wGRS) was constructed by summing nine risk alleles based on nominal significance and a consistent effect direction in 1,395 controls and 718 patients with impaired fasting glucose (IFG) or newly diagnosed type 2 diabetes. All the participants were divided into the following three groups: low-wGRS, middle-wGRS, and high-wGRS groups. Among the nine SNPs, five SNPs were significantly associated with IFG and type 2 diabetes in this Korean population. wGRS was significantly associated with increased IFG and newly diagnosed type 2 diabetes (p = 6.83 × 10 -14 , odds ratio = 1.839) after adjusting for confounding factors. Among the IFG and type 2 diabetes patients, the fasting serum glucose and HbA 1c levels were significantly higher in the high-wGRS group than in the other groups. The urinary 8-epi-PGF 2α and malondialdehyde concentrations were significantly higher in the high-wGRS group than in the other groups. Moreover, general population-level instrumental variable estimation (using wGRS as an instrument) strengthened the causal effect regarding the largely adverse influence of high levels of fasting serum glucose on markers of oxidative stress in the Korean population. Thus, the combination of common genetic variants with small effects on IFG and newly diagnosed type 2 diabetes are significantly associated with oxidative stress.
Zhang, Tianqi; Shaw, Marnie E; Walsh, Erin I; Sachdev, Perminder S; Anstey, Kaarin J; Cherbuin, Nicolas
2018-06-07
Previous studies have demonstrated associations between higher blood glucose and brain atrophy and functional deficits, however, little is known about the association between blood glucose, striatal volume and striatal function despite sensori-motor deficits being reported in diabetes. This study investigated the relationship between blood glucose levels, striatal volume and fine motor skills in a longitudinal cohort of cognitively healthy individuals living in the community with normal or impaired fasting glucose or type 2 diabetes. Participants were 271 cognitively healthy individuals (mean age 63 years at inclusion) with normal fasting glucose levels (<5.6 mmol/L) (n=173), impaired fasting glucose (5.6-6.9 mmol/L) (n=57), or with type 2 diabetes (≥7.0 mmol/L) (n=41). Fasting glucose, Purdue Pegboard scores as measurement of fine motor skills, and brain scans were collected at wave 1, 2 and 4, over a total follow-up of twelve years. Striatal volumes were measured using FreeSurfer after controlling for age, sex and intracranial volume. Results showed that type 2 diabetes was associated with smaller right putamen volume and lower Purdue Pegboard scores after controlling for age, sex and intracranial volume. These findings add to the evidence suggesting that higher blood glucose levels, especially type 2 diabetes, may impair brain structure and function. Copyright © 2018. Published by Elsevier B.V.
Wu, Jin-Lei; Ji, Xin; Zhang, Shou
2016-01-01
Recently, a novel three-dimensional entangled state called tree-type entanglement, which is likely to have applications for improving quantum communication security, was prepared via adiabatic passage by Song et al. Here we propose two schemes for fast generating tree-type three-dimensional entanglement among three spatially separated atoms via shortcuts to adiabatic passage. With the help of quantum Zeno dynamics, two kinds of different but equivalent methods, Lewis-Riesenfeld invariants and transitionless quantum driving, are applied to construct shortcuts to adiabatic passage. The comparisons between the two methods are discussed. The strict numerical simulations show that the tree-type three-dimensional entangled states can be fast prepared with quite high fidelities and the two schemes are both robust against the variations in the parameters, atomic spontaneous emissions and the cavity-fiber photon leakages. PMID:27667583
Qiu, Jing; Kleineidam, Anna; Gouraud, Sabine; Yao, Song Tieng; Greenwood, Mingkwan; Hoe, See Ziau; Hindmarch, Charles
2014-01-01
The supraoptic nucleus (SON) of the hypothalamus is responsible for maintaining osmotic stability in mammals through its elaboration of the antidiuretic hormone arginine vasopressin. Upon dehydration, the SON undergoes a function-related plasticity, which includes remodeling of morphology, electrical properties, and biosynthetic activity. This process occurs alongside alterations in steady state transcript levels, which might be mediated by changes in the activity of transcription factors. In order to identify which transcription factors might be involved in changing patterns of gene expression, an Affymetrix protein-DNA array analysis was carried out. Nuclear extracts of SON from dehydrated and control male rats were analyzed for binding to the 345 consensus DNA transcription factor binding sequences of the array. Statistical analysis revealed significant changes in binding to 26 consensus elements, of which EMSA confirmed increased binding to signal transducer and activator of transcription (Stat) 1/Stat3, cellular Myelocytomatosis virus-like cellular proto-oncogene (c-Myc)-Myc-associated factor X (Max), and pre-B cell leukemia transcription factor 1 sequences after dehydration. Focusing on c-Myc and Max, we used quantitative PCR to confirm previous transcriptomic analysis that had suggested an increase in c-Myc, but not Max, mRNA levels in the SON after dehydration, and we demonstrated c-Myc- and Max-like immunoreactivities in SON arginine vasopressin-expressing cells. Finally, by comparing new data obtained from Roche-NimbleGen chromatin immunoprecipitation arrays with previously published transcriptomic data, we have identified putative c-Myc target genes whose expression changes in the SON after dehydration. These include known c-Myc targets, such as the Slc7a5 gene, which encodes the L-type amino acid transporter 1, ribosomal protein L24, histone deactylase 2, and the Rat sarcoma proto-oncogene (Ras)-related nuclear GTPase. PMID:25144923
NASA Technical Reports Server (NTRS)
Montgomery, M. T.; Dunkerton, T. J.; Wang, Z.
2010-01-01
Recent work has hypothesized that tropical cyclones in the deep Atlantic and eastern Pacific basins develop from within the cyclonic Kelvin cat's eye of a tropical easterly wave critical layer located equatorward of the easterly jet axis. The cyclonic critical layer is thought to be important to tropical cyclogenesis because its cat's eye provides (i) a region of cyclonic vorticity and weak deformation by the resolved flow, (ii) containment of moisture entrained by the developing flow and/or lofted by deep convection therein, (iii) confinement of mesoscale vortex aggregation, (iv) a predominantly convective type of heating profile, and (v) maintenance or enhancement of the parent wave until the developing proto-vortex becomes a self-sustaining entity and emerges from the wave as a tropical depression. This genesis sequence and the overarching framework for describing how such hybrid wave-vortex structures become tropical depressions/storms is likened to the development of a marsupial infant in its mother's pouch, and for this reason has been dubbed the "marsupial paradigm". Here we conduct the first multi-scale test of the marsupial paradigm in an idealized setting by revisiting the Kurihara and Tuleya problem examining the transformation of an easterly wave-like disturbance into a tropical storm vortex using the WRF model. An analysis of the evolving winds, equivalent potential temperature, and relative vertical vorticity is presented from coarse (28 km), intermediate (9 km) and high resolution (3.1 km) simulations. The results are found to support key elements of the marsupial paradigm by demonstrating the existence of rotationally dominant region with minimal strain/shear deformation near the center of the critical layer pouch that contains strong cyclonic vorticity and high saturation fraction. This localized region within the pouch serves as the "attractor" for an upscale "bottom up" development process while the wave pouch and proto-vortex move together.
Cancer: a reproductive strategy of "ultra-selfish" genes?
Schuiling, G A
2004-01-01
A hypothesis is presented in which the process of "malignant transformation" which ultimately results in the rapidly dividing tumor(s)(cells) causing "cancer", is regarded as an evolved reproductive strategy of "ultra-selfish" (proto-)(onco-) genes, already present in the genome, or introduced by a virus.
Kim, Minjoo; Kim, Minkyung; Han, Ji Yun; Lee, Sang-Hyun; Jee, Sun Ha; Lee, Jong Ho
2017-03-01
To determine differences between peripheral blood mononuclear cells and the plasma metabolites in patients with impaired fasting glucose or type 2 diabetes and healthy controls. In all, 65 nononobese patients (aged 30-70 years) with impaired fasting glucose or type 2 diabetes and 65 nonobese sex-matched healthy controls were included, and fasting peripheral blood mononuclear cell and plasma metabolomes were profiled. The diabetic or impaired fasting glucose patients showed higher circulating and peripheral blood mononuclear cell lipoprotein phospholipase A 2 activities, high-sensitivity C-reactive protein and tumour necrosis factor-α than controls. Compared with controls, impaired fasting glucose or diabetic subjects showed increases in 11 peripheral blood mononuclear cell metabolites: six amino acids (valine, leucine, methionine, phenylalanine, tyrosine and tryptophan), l-pyroglutamic acid, two fatty acid amides containing palmitic amide and oleamide and two lysophosphatidylcholines. In impaired fasting glucose or diabetic patients, peripheral blood mononuclear cell lipoprotein phospholipase A 2 positively associated with peripheral blood mononuclear cell lysophosphatidylcholines and circulating inflammatory markers, including tumour necrosis factor-α, high-sensitivity C-reactive protein and lipoprotein phospholipase A 2 activities. In plasma metabolites between patients and healthy controls, we observed significant increases in only three amino acids (proline, valine and leucine) and decreases in only five lysophosphatidylcholines. This study demonstrates significant differences in the peripheral blood mononuclear cell metabolome in patients with impaired fasting glucose or diabetes compared with healthy controls. These differences were greater than those observed in the plasma metabolome. These data suggest peripheral blood mononuclear cells as a useful tool to better understand the inflammatory pathophysiology of diabetes.
Phonological and Orthographic Overlap Effects in Fast and Masked Priming
Frisson, Steven; Bélanger, Nathalie N.; Rayner, Keith
2014-01-01
We investigated how orthographic and phonological information is activated during reading, using a fast priming task, and during single word recognition, using masked priming. Specifically, different types of overlap between prime and target were contrasted: high orthographic and high phonological overlap (track-crack), high orthographic and low phonological overlap (bear-gear), or low orthographic and high phonological overlap (fruit-chute). In addition, we examined whether (orthographic) beginning overlap (swoop-swoon) yielded the same priming pattern as end (rhyme) overlap (track-crack). Prime durations were 32 and 50ms in the fast priming version, and 50ms in the masked priming version, and mode of presentation (prime and target in lower case) was identical. The fast priming experiment showed facilitatory priming effects when both orthography and phonology overlapped, with no apparent differences between beginning and end overlap pairs. Facilitation was also found when prime and target only overlapped orthographically. In contrast, the masked priming experiment showed inhibition for both types of end overlap pairs (with and without phonological overlap), and no difference for begin overlap items. When prime and target only shared principally phonological information, facilitation was only found with a long prime duration in the fast priming experiment, while no differences were found in the masked priming version. These contrasting results suggest that fast priming and masked priming do not necessarily tap into the same type of processing. PMID:24365065
Simon, Magda; Porter, Rebecca; Brown, Robert; Coulton, Gary R; Terenghi, Giorgio
2003-11-01
We investigated whether neurotrophin-4 (NT-4) and brain-derived neurotrophic factor (BDNF) affected the reinnervation of slow and fast motor units. Neurotrophin-impregnated or plain fibronectin (FN) conduits were inserted into a sciatic nerve gap. Fast extensor digitorum longus (EDL) and slow soleus muscles were collected 4 months postsurgery. Muscles were weighed and fibre type proportion and mean fibre diameters were derived from muscle cross-sections. All fibre types in muscles from FN animals were severely atrophied and this correlated well with type 1 fibre loss and atrophy in soleus and type 2b loss and atrophy in EDL. Treatment with NT-4 reversed soleus but not EDL mass loss above the FN group by significantly restoring type 1 muscle fibre proportion and diameters towards those of normal unoperated animals. BDNF did not increase muscle mass but did have minor effects on fibre type and diameter. Thus, NT-4 significantly improved slow motor unit recovery, and provides a basis for therapies intended to aid the functional recovery of muscles after denervating injury.
Fast identification of the conduction-type of nanomaterials by field emission technique.
Yang, Xun; Gan, Haibo; Tian, Yan; Peng, Luxi; Xu, Ningsheng; Chen, Jun; Chen, Huanjun; Deng, Shaozhi; Liang, Shi-Dong; Liu, Fei
2017-10-12
There are more or less dopants or defects existing in nanomaterials, so they usually have different conduct-types even for the same substrate. Therefore, fast identification of the conduction-type of nanomaterials is very essential for their practical application in functional nanodevices. Here we use the field emission (FE) technique to research nanomaterials and establish a generalized Schottky-Nordheim (SN) model, in which an important parameter λ (the image potential factor) is first introduced to describe the effective image potential. By regarding λ as the criterion, their energy-band structure can be identified: (a) λ = 1: metal; (b) 0.5 < λ < 1: n-type semiconductor; (c) 0 < λ < 0.5: p-type semiconductor. Moreover, this method can be utilized to qualitatively evaluate the doping-degree for a given semiconductor. We test numerically and experimentally a group of nanomaterial emitters and all results agree with our theoretical results very well, which suggests that our method based on FE measurements should be an ideal and powerful tool to fast ascertain the conduction-type of nanomaterials.
Fast food: unfriendly and unhealthy.
Stender, S; Dyerberg, J; Astrup, A
2007-06-01
Although nutrition experts might be able to navigate the menus of fast-food restaurant chains, and based on the nutritional information, compose apparently 'healthy' meals, there are still many reasons why frequent fast-food consumption at most chains is unhealthy and contributes to weight gain, obesity, type 2 diabetes and coronary artery disease. Fast food generally has a high-energy density, which, together with large portion sizes, induces over consumption of calories. In addition, we have found it to be a myth that the typical fast-food meal is the same worldwide. Chemical analyses of 74 samples of fast-food menus consisting of French fries and fried chicken (nuggets/hot wings) bought in McDonalds and KFC outlets in 35 countries in 2005-2006 showed that the total fat content of the same menu varies from 41 to 65 g at McDonalds and from 42 to 74 g at KFC. In addition, fast food from major chains in most countries still contains unacceptably high levels of industrially produced trans-fatty acids (IP-TFA). IP-TFA have powerful biological effects and may contribute to increased weight gain, abdominal obesity, type 2 diabetes and coronary artery disease. The food quality and portion size need to be improved before it is safe to eat frequently at most fast-food chains.
DOE Office of Scientific and Technical Information (OSTI.GOV)
Yamamoto, S., E-mail: yamamoto.satoshi.6n@kyoto-u.ac.jp; Kobayashi, S.; Nagasaki, K.
A Faraday-cup type lost-fast ion probe (FLIP) has been designed and installed in Heliotron J for the purpose of the studies of interaction between fast ions and MHD instabilities. The FLIP can measure the co-going fast ions whose energy is in the range of 1.7–42.5 keV (proton) and pitch angle of 90{sup ∘}–140{sup ∘}, especially for fast ions having the injection energy of neutral beam injection (NBI). The FLIP successfully measured the re-entering passing ions and trapped lost-fast ions caused by fast-ion-driven energetic particle modes in NBI heated plasmas.
BISON and MARMOT Development for Modeling Fast Reactor Fuel Performance
DOE Office of Scientific and Technical Information (OSTI.GOV)
Gamble, Kyle Allan Lawrence; Williamson, Richard L.; Schwen, Daniel
2015-09-01
BISON and MARMOT are two codes under development at the Idaho National Laboratory for engineering scale and lower length scale fuel performance modeling. It is desired to add capabilities for fast reactor applications to these codes. The fast reactor fuel types under consideration are metal (U-Pu-Zr) and oxide (MOX). The cladding types of interest include 316SS, D9, and HT9. The purpose of this report is to outline the proposed plans for code development and provide an overview of the models added to the BISON and MARMOT codes for fast reactor fuel behavior. A brief overview of preliminary discussions on themore » formation of a bilateral agreement between the Idaho National Laboratory and the National Nuclear Laboratory in the United Kingdom is presented.« less
Pre-Licensing Evaluation of Legacy SFR Metallic Fuel Data
DOE Office of Scientific and Technical Information (OSTI.GOV)
Yacout, A. M.; Billone, M. C.
2016-09-16
The US sodium cooled fast reactor (SFR) metallic fuel performance data that are of interest to advanced fast reactors applications, can be attributed mostly to the Integral Fast Reactor (IFR) program between 1984 and 1994. Metallic fuel data collected prior to the IFR program were associated with types of fuel that are not of interest to future advanced reactors deployment (e.g., previous U-Fissium alloy fuel). The IFR fuels data were collected from irradiation of U-Zr based fuel alloy, with and without Pu additions, and clad in different types of steels, including HT9, D9, and 316 stainless-steel. Different types of datamore » were generated during the program, and were based on the requirements associated with the DOE Advanced Liquid Metal Cooled Reactor (ALMR) program.« less
Functional properties of slow and fast gastrocnemius muscle fibers after a 17-day spaceflight
NASA Technical Reports Server (NTRS)
Widrick, J. J.; Romatowski, J. G.; Norenberg, K. M.; Knuth, S. T.; Bain, J. L.; Riley, D. A.; Trappe, S. W.; Trappe, T. A.; Costill, D. L.; Fitts, R. H.
2001-01-01
The purpose of this investigation was to study the effects of a 17-day spaceflight on the contractile properties of individual fast- and slow-twitch fibers isolated from biopsies of the fast-twitch gastrocnemius muscle of four male astronauts. Single chemically skinned fibers were studied during maximal Ca2+-activated contractions with fiber myosin heavy chain (MHC) isoform expression subsequently determined by SDS gel electrophoresis. Spaceflight had no significant effect on the mean diameter or specific force of single fibers expressing type I, IIa, or IIa/IIx MHC, although a small reduction in average absolute force (P(o)) was observed for the type I fibers (0.68 +/- 0.02 vs. 0.64 +/- 0.02 mN, P < 0.05). Subject-by-flight interactions indicated significant intersubject variation in response to the flight, as postflight fiber diameter and P(o) where significantly reduced for the type I and IIa fibers obtained from one astronaut and for the type IIa fibers from another astronaut. Average unloaded shortening velocity [V(o), in fiber lengths (FL)/s] was greater after the flight for both type I (0.60 +/- 0.03 vs. 0.76 +/- 0.02 FL/s) and IIa fibers (2.33 +/- 0.25 vs. 3.10 +/- 0.16 FL/s). Postflight peak power of the type I and IIa fibers was significantly reduced only for the astronaut experiencing the greatest fiber atrophy and loss of P(o). These results demonstrate that 1) slow and fast gastrocnemius fibers show little atrophy and loss of P(o) but increased V(o) after a typical 17-day spaceflight, 2) there is, however, considerable intersubject variation in these responses, possibly due to intersubject differences in in-flight physical activity, and 3) in these four astronauts, fiber atrophy and reductions in P(o) were less for slow and fast fibers obtained from the phasic fast-twitch gastrocnemius muscle compared with slow and fast fibers obtained from the slow antigravity soleus [J. J. Widrick, S. K. Knuth, K. M. Norenberg, J. G. Romatowski, J. L. W. Bain, D. A. Riley, M. Karhanek, S. W. Trappe, T. A. Trappe, D. L. Costill, and R. H. Fitts. J Physiol (Lond) 516: 915-930, 1999].
Soukup, T; Diallo, M
2015-01-01
Recently, we have established that slow soleus (SOL) and fast extensor digitorum longus (EDL) muscles of euthyroid (EU) Lewis rats posses the same proportions between their four myosin heavy chain (MyHC) mRNAs, protein isoforms and fiber types as determined by real time RT-PCR, SDS-PAGE and 2-D stereological fiber type analysis, respectively. In the present paper we investigated if these proportions are maintained in adult Lewis rats with hyperthyroid (HT) and hypothyroid (HY) status. Although HT and HY states change MyHC isoform expression, results from all three methods showed that proportion between MyHC mRNA-1, 2a, -2x/d, -2b, protein isoforms MyHC-1, -2a, -2x/d, -2b and to lesser extent also fiber types 1, 2A, 2X/D, 2B were preserved in both SOL and EDL muscles. Furthermore, in the SOL muscle mRNA expression of slow MyHC-1 remained up to three orders higher compared to fast MyHC transcripts, which explains the predominance of MyHC-1 isoform and fiber type 1 even in HT rats. Although HT status led in the SOL to increased expression of MyHC-2a mRNA, MyHC-2a isoform and 2A fibers, it preserved extremely low expression of MyHC-2x and -2b mRNA and protein isoforms, which explains the absence of pure 2X/D and 2B fibers. HY status, on the other hand, almost completely abolished expression of all three fast MyHC mRNAs, MyHC protein isoforms and fast fiber types in the SOL muscle. Our data present evidence that a correlation between mRNA, protein content and fiber type composition found in EU status is also preserved in HT and HY rats.
Safety and metabolic impact of Ramadan fasting in children and adolescents with type 1 diabetes.
El-Hawary, Amany; Salem, Nanees; Elsharkawy, Ashraf; Metwali, Abdelhameed; Wafa, Alaa; Chalaby, Nehad; El-Gilany, Abelhady; Abo-Elmagd, Megahed; El-Ziny, Magdy
2016-05-01
Annually, many children and adolescents with type 1 diabetes mellitus (T1DM) insist on fasting for Ramadan despite being exempted and despite knowing all the risks. We aimed to assess the safety and metabolic impact of Ramadan fasting in children with T1DM using different insulin regimens. Children with T1DM who choose to fast during Ramadan 1434/2013 (29 days) were recruited 3 months before Ramadan. They received pre-Ramadan intensive education. Three insulin regimens were included; Regimen-I (regular insulin/NPH); Regimen-II (regular insulin/insulin glargine) and Regimen-III (premixed insulin). Changes in weight, insulin dose, HbA1c, fructosamine and lipid profile were evaluated. Out of total 53 patients (24 male), 28 patients (52.8%) completed Ramadan fasting (fasting group). The remaining 25 patients were included in (broke-fasting group). Positive correlation between fructosamine changes and number of days fasted during Ramadan. Significant decrease in post-Ramadan fructosamine (<0.001) and increase in post-Ramadan total cholesterol and low density lipoprotein (LDL) levels were detected within fasting, broke-fasting and insulin regimen groups. Significant higher blood glucose at three time points, pre-Iftar, pre-Sohur and midday in Regimen-I compared to Regimen-II and Regimen-III (p=0.004). Fasting during Ramadan is feasible and is associated with significant improvement in fructosamine level in children with T1DM using different insulin regimens. Mandatory consideration to the quality and quantity of food offered to patients with T1DM during Ramadan to guard against adverse changes in lipid profile.
Creating Drought- and Salt-Tolerant Crops by Overexpressing a Vacuolar Pyrophosphatase Gene
USDA-ARS?s Scientific Manuscript database
Increased expression of an Arabidopsis vacuolar pyrophosphatase gene, AVP1, leads to increased drought and salt tolerance in transgenic plants, which has been demonstrated in laboratory and field conditions. The molecular mechanism of AVP1-mediated drought resistance is likely due to increased proto...
The application of quantitative real-time PCR (qPCR) technologies for the rapid identification of fecal bacteria in environmental waters is being considered for use as a national water quality metric in the United States. The transition from research tool to a standardized proto...
Material Cultural Correlates of the Athapaskan Expansion: A Cross-Disciplinary Approach
ERIC Educational Resources Information Center
Wilson, Joseph Andrew Park
2011-01-01
Contrary to stereotypes of proto-Athapaskan culture as simplistic and archaic, evidence points to a sophisticated web of late prehistoric Asian-Athapaskan interactions. A holistic assessment of Athapaskan migrations in the context of the transpacific Dene-Yeneseian phylum (the largest, fastest pedestrian language spread on earth) sees…
76 FR 43709 - Notice of Inventory Completion: Denver Museum of Nature & Science, Denver, CO
Federal Register 2010, 2011, 2012, 2013, 2014
2011-07-21
...; Cayuga Nation of New York; Delaware Nation, Oklahoma; Delaware Tribe of Indians, Oklahoma; Eastern... same proto- Iroquoian culture. Around A.D. 1300, the Susquehannock split off from that culture... evidence also demonstrates that the Susquehannock and Haudenosaunee shared a very similar material culture...
Whitesell, L; Rosolen, A; Neckers, L M
1991-01-01
Neuroectodermal tumors of childhood provide a unique opportunity to examine the role of genes potentially regulating neuronal growth and differentiation because many cell lines derived from these tumors are composed of at least two distinct morphologic cell types. These types display variant phenotypic characteristics and spontaneously interconvert, or transdifferentiate, in vitro. The factors that regulate transdifferentiation are unknown. Application of antisense approaches to the transdifferentiation process has allowed us to explore the precise role that N-myc may play in regulating developing systems. We now report construction of an episomally replicating expression vector designed to generate RNA antisense to part of the human N-myc gene. Such a vector is able to specifically inhibit N-myc expression in cell lines carrying both normal and amplified N-myc alleles. Inhibition of N-myc expression blocks transdifferentiation in these lines, with accumulation of cells of an intermediate phenotype. A concomitant decrease in growth rate but not loss of tumorigenicity was observed in the N-myc nonamplified cell line CHP-100. Vector-generated antisense RNA should allow identification of genes specifically regulated by the proto-oncogene N-myc. Images PMID:1996098
The Effects of Admixed Dark Matter on Accretion Induced Collapse
NASA Astrophysics Data System (ADS)
Leung, Shing-Chi; Chu, Ming-Chung; Lin, Lap-Ming; Nomoto, Ken'ichi
About 90% mass of matter in the universe is dark matter (DM) and most of its properties remain poorly constrained since it does not interact with electromagnetic and strong forces. To constrain the properties of DM, studying its effects on stellar objects is one of the methods. In [Leung et al., Phys. Rev. D 87, 123506 (2013); Leung et al., Astrophys. J. 812, 110 (2015)] we have shown that the dark matter admixture can significantly lower the Chandrasekhar mass of a white dwarf and also its corresponding explosion as a Type Ia supernova (SNe Ia). This type of objects may explain some observed sub-luminous SNe Ia. Depending on their stellar evolution path and interactions with companion stars, such objects can also undergo a direct collapse to form neutron stars (NSs) instead of explosion. Here we present results of one-dimensional hydrodynamics simulations of a NS with admixed DM. The DM is assumed to be asymmetric and in the form of an ideal degenerate Fermi gas. We study how the admixture of DM affects the collapse dynamics, its neutrino signals and the properties of the proto-NS. Possible observational signals are also discussed.
Bacus, S. S.; Chin, D.; Yarden, Y.; Zelnick, C. R.; Stern, D. F.
1996-01-01
The neu/erbB-2/HER-2 proto-oncogene is amplified and/or overexpressed in up to 30% of mammary carcinomas and has been variably correlated with poor prognosis. The signaling activity of the encoded receptor tyrosine kinase is regulated by interactions with other type 1 receptors and their ligands. We have used a novel approach, phosphorylation-sensitive anti-Neu antibodies, to quantify signaling by Neu and epidermal growth factor receptor in a panel of frozen sections of mammary carcinoma specimens. We also determined the relationship of Neu, phosphorylated Neu (and epidermal growth factor receptor), and phosphotyrosine to the expression of Neu-related receptors (epidermal growth factor receptor, HER-3, and HER-4) and to prognostic factors (estrogen and progesterone receptor). We found that tyrosine phosphorylation of Neu (and hence signaling activity) is highly variable among mammary carcinomas. Neu and HER-4 were associated with divergent correlates, suggesting that they have profoundly different biological activities. These results have implications for etiology of mammary carcinoma for clinical evaluation of mammary carcinoma patients, and for development of Neu-targeted therapeutic strategies. Images Figure 1 Figure 2 PMID:8579117
NASA Astrophysics Data System (ADS)
Garrido, Mirta; Barra, Fernando; Domínguez, Eduardo; Ruiz, Joaquin; Valencia, Victor A.
2008-07-01
The La Voluntad porphyry Cu-Mo deposit in Neuquén, Argentina, is one of several poorly known porphyry-type deposits of Paleozoic to Early Jurassic age in the central and southern Andes. Mineralization at La Voluntad is related to a tonalite porphyry from the Chachil Plutonic Complex that intruded metasedimentary units of the Piedra Santa Complex. Five new Re-Os molybdenite ages from four samples representing three different vein types (i.e., quartz-molybdenite, quartz-sericite-molybdenite and quartz-sericite-molybdenite ± chalcopyrite-pyrite) are identical within error and were formed between ~312 to ~316 Ma. Rhenium and Os concentrations range between 34 to 183 ppm and 112 to 599 ppb, respectively. The new Re-Os ages indicate that the main mineralization event at La Voluntad, associated to sericitic alteration, was emplaced during a time span of 1.7 ± 3.2 Ma and that the deposit is Carboniferous in age, not Permian as previously thought. La Voluntad is the oldest porphyry copper deposit so far recognized in the Andes and indicates the presence of an active magmatic arc, with associated porphyry style mineralization, at the proto-Pacific margin of Gondwana during the Early Pennsylvanian.
Nuttall, Frank Q; Almokayyad, Rami M; Gannon, Mary C
2015-02-01
Hyperglycemia improves when patients with type 2 diabetes are placed on a weight-loss diet. Improvement typically occurs soon after diet implementation. This rapid response could result from low fuel supply (calories), lower carbohydrate content of the weight-loss diet, and/or weight loss per se. To differentiate these effects, glucose, insulin, C-peptide and glucagon were determined during the last 24 h of a 3-day period without food (severe calorie restriction) and a calorie-sufficient, carbohydrate-free diet. Seven subjects with untreated type 2 diabetes were studied. A randomized-crossover design with a 4-week washout period between arms was used. Results from both the calorie-sufficient, carbohydrate-free diet and the 3-day fast were compared with the initial standard diet consisting of 55% carbohydrate, 15% protein and 30% fat. The overnight fasting glucose concentration decreased from 196 (standard diet) to 160 (carbohydrate-free diet) to 127 mg/dl (fasting). The 24 h glucose and insulin area responses decreased by 35% and 48% on day 3 of the carbohydrate-free diet, and by 49% and 69% after fasting. Overnight basal insulin and glucagon remained unchanged. Short-term fasting dramatically lowered overnight fasting and 24 h integrated glucose concentrations. Carbohydrate restriction per se could account for 71% of the reduction. Insulin could not entirely explain the glucose responses. In the absence of carbohydrate, the net insulin response was 28% of the standard diet. Glucagon did not contribute to the metabolic adaptations observed. Published by Elsevier Inc.
NASA Astrophysics Data System (ADS)
Du Vivier, A. D. C.; Selby, D.; Condon, D. J.; Takashima, R.; Nishi, H.
2015-10-01
Studies of OAE 2 sections beyond the Atlantic Ocean, Western Interior Seaway (WIS) and European pelagic shelf are limited. Here, we present initial osmium isotope stratigraphy (187Os/188Os-Osi) from two proto-Pacific sites that span the Cenomanian-Turonian boundary interval (CTBI): the Yezo Group (YG) section, Hokkaido, Japan, and the Great Valley Sequence (GVS), California, USA; to evaluate the 187Os/188Os seawater chemistry of the proto-Pacific. Additionally we combine new 206Pb/238U zircon CA-ID-TIMS geochronology from five volcanic tuff horizons of the Yezo Group section to test and facilitate inter-basinal integration with the WIS using radio-isotopically constrained age-depth models for both sections, and quantitatively constrain the absolute timing and duration of events across the CTBI. The YG shows an almost identical Osi profile to that of the WIS, and very similar to that of other sites of the proto-Atlantic and European pelagic oceans (Turgeon and Creaser, 2008; Du Vivier et al., 2014). The characteristics of the Osi profile are radiogenic and heterogeneous (∼0.55-0.85) prior to the OAE 2, and synchronous with the inferred OAE 2 onset the Osi abruptly become unradiogenic and remain relatively homogeneous (∼0.20-0.30) before showing a gradual return to more radiogenic Osi (∼ 0.70) throughout the middle to late OAE 2. A206Pb/238U zircon age of an interbedded tuff (HK017) in the adjacent horizon to the first unradiogenic Osi value constrains the age of the Osi inflection at 94.44 ± 0.14 Ma. This age, including uncertainty, agrees with the interpolated age of the same point in the Osi profile (94.28 ± 0.25 Ma) in the only other dated OAE 2 section, the WIS; indicating a coeval shift in seawater chemistry associated with volcanism at the OAE 2 onset at the levels of temporal resolution (ca. 0.1 Myr). Further, prior to the onset of OAE 2 an enhanced radiogenic inflection in the Osi profile of the YG is correlative, within uncertainty, with a similar trend in the WIS based on the U-Pb age-depth model. The interpolated ages, 94.78 ± 0.12 Ma and 94.66 ± 0.25 Ma for this Osi inflection in the YG and WIS, respectively, indicate that palaeocirculation was sufficient to simultaneously influence transbasinal seawater chemistry. In contrast, the pre-OAE 2 Osi profile for the GVS is disparate to that of the YG and those of the proto-Atlantic and European pelagic shelf locations. We interpret the pre OAE 2 heterogeneous Osi values (0.30-0.95) to record a palaeobasin that was regionally influenced interchangeably by both unradiogenic (hydrothermal flux) and radiogenic (continental flux) Os. We conclude that the Osi profiles from the proto-Pacific sections record both trends that are consistent globally (OAE 2 onset, syn and post OAE 2), but also show regional differences (pre OAE 2) between OAE 2 sections worldwide. As such the Osi profiles coupled with U-Pb geochronology facilitate the correlation of OAE 2 stratigraphy, and demonstrate both regional and global ocean dynamics.
Relativistic MHD modeling of magnetized neutron stars, pulsar winds, and their nebulae
NASA Astrophysics Data System (ADS)
Del Zanna, L.; Pili, A. G.; Olmi, B.; Bucciantini, N.; Amato, E.
2018-01-01
Neutron stars are among the most fascinating astrophysical sources, being characterized by strong gravity, densities about the nuclear one or even above, and huge magnetic fields. Their observational signatures can be extremely diverse across the electromagnetic spectrum, ranging from the periodic and low-frequency signals of radio pulsars, up to the abrupt high-energy gamma-ray flares of magnetars, where energies of ∼ {10}46 {erg} are released in a few seconds. Fast-rotating and highly magnetized neutron stars are expected to launch powerful relativistic winds, whose interaction with the supernova remnants gives rise to the non-thermal emission of pulsar wind nebulae, which are known cosmic accelerators of electrons and positrons up to PeV energies. In the extreme cases of proto-magnetars (magnetic fields of ∼ {10}15 G and millisecond periods), a similar mechanism is likely to provide a viable engine for the still mysterious gamma-ray bursts. The key ingredient in all these spectacular manifestations of neutron stars is the presence of strong magnetic fields in their constituent plasma. Here we will present recent updates of a couple of state-of-the-art numerical investigations by the high-energy astrophysics group in Arcetri: a comprehensive modeling of the steady-state axisymmetric structure of rotating magnetized neutron stars in general relativity, and dynamical 3D MHD simulations of relativistic pulsar winds and their associated nebulae.