Science.gov

Sample records for provenance

  1. Medical rare book provenance.

    PubMed Central

    Overmier, J A; Sentz, L

    1987-01-01

    Provenance is defined as the record of a book's ownership history. Its value and uses are explored. A survey of provenance practices in medical school rare book libraries found that only 21% of the reporting libraries maintain this important file. Examples of the uses and value of a provenance file in a medical rare book collection are presented. Decisions necessary to institute and maintain such a file are outlined and discussed. PMID:3828606

  2. Proven Weight Loss Methods

    MedlinePlus

    Fact Sheet Proven Weight Loss Methods What can weight loss do for you? Losing weight can improve your health in a number of ways. It can lower ... at www.hormone.org/Spanish . Proven Weight Loss Methods Fact Sheet www.hormone.org

  3. Innocent Until Proven Guilty

    ERIC Educational Resources Information Center

    Case, Catherine; Whitaker, Douglas

    2016-01-01

    In the criminal justice system, defendants accused of a crime are presumed innocent until proven guilty. Statistical inference in any context is built on an analogous principle: The null hypothesis--often a hypothesis of "no difference" or "no effect"--is presumed true unless there is sufficient evidence against it. In this…

  4. The provenance of rutile.

    USGS Publications Warehouse

    Force, E.R.

    1980-01-01

    Most coarse detrital rutile is derived from high-grade metamorphic rocks. Contrary to a conventional assumption, independent rutile grains are particularly rare in igneous rocks except alkalic rocks. The use of rutile in the zircon-tourmaline-rutile index of mineralogic maturity is only partially valid, owing to its restricted provenance. -Author

  5. Provenance Store Evaluation

    SciTech Connect

    Paulson, Patrick R.; Gibson, Tara D.; Schuchardt, Karen L.; Stephan, Eric G.

    2008-03-01

    Requirements for the provenance store and access API are developed. Existing RDF stores and APIs are evaluated against the requirements and performance benchmarks. The team’s conclusion is to use MySQL as a database backend, with a possible move to Oracle in the near-term future. Both Jena and Sesame’s APIs will be supported, but new code will use the Jena API

  6. Basaltic island sand provenance

    SciTech Connect

    Marsaglia, K.M. . Dept. of Geological Sciences)

    1992-01-01

    The Hawaiian Islands are an ideal location to study basaltic sand provenance in that they are a series of progressively older basaltic shield volcanoes with arid to humid microclimates. Sixty-two sand samples were collected from beaches on the islands of Hawaii, Maui, Oahu and Kauai and petrographically analyzed. The major sand components are calcareous bioclasts, volcanic lithic fragments, and monomineralic grains of dense minerals and plagioclase. Proportions of these components vary from island to island, with bioclastic end members being more prevalent on older islands exhibiting well-developed fringing reef systems and volcanic end members more prevalent on younger, volcanically active islands. Climatic variations across the island of Hawaii are reflected in the percentage of weathered detritus, which is greater on the wetter, northern side of the island. The groundmass of glassy, basaltic lithics is predominantly black tachylite, with lesser brown sideromelane; microlitic and lathwork textures are more common than holohyaline vitric textures. Other common basaltic volcanic lithic fragments are holocrystalline aggregates of silt-sized pyroxene or olivine, opaque minerals and plagioclase. Sands derived from alkalic lavas are texturally and compositionally indistinguishable from sands derived from tholeiitic lavas. Although Hawaiian basaltic sands overlap in composition with magmatic arc-derived sands in terms of their relative QFL, QmPK and LmLvLs percentages, they are dissimilar in that they lack felsic components and are more enriched in lathwork volcanic lithic fragments, holocrystalline volcanic lithic fragments, and dense minerals.

  7. Provenance through Time

    NASA Astrophysics Data System (ADS)

    Chandler, C. L.; Groman, R. C.; Shepherd, A.; Allison, M. D.; Kinkade, D.; Rauch, S.; Wiebe, P. H.; Glover, D. M.

    2014-12-01

    The ability to reproduce scientific results is a cornerstone of the scientific method, and access to the data upon which the results are based is essential to reproducibility. Access to the data alone is not enough though, and research communities have recognized the importance of metadata (data documentation) to enable discovery and data access, and facilitate interpretation and accurate reuse. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) was first funded in late 2006 by the National Science Foundation (NSF) Division of Ocean Sciences (OCE) Biology and Chemistry Sections to help ensure that data generated during NSF OCE funded research would be preserved and available for future use. The BCO-DMO was formed by combining the formerly independent data management offices of two marine research programs: the United States Joint Global Ocean Flux Study (US JGOFS) and the US GLOBal Ocean ECosystems Dynamics (US GLOBEC) program. Since the US JGOFS and US GLOBEC programs were both active (1990s) there have been significant changes in all aspects of the research data life cycle, and the staff at BCO-DMO has modified the way in which we manage data contributed to the office. The supporting documentation that describes each dataset was originally displayed as a human-readable text file retrievable via a Web browser. BCO-DMO still offers that form because our primary audience is marine researchers using Web browser clients; however we are seeing an increased demand to support machine client access. Metadata records from the BCO-DMO data system are now extracted and published out in a variety of formats. The system supports ISO 19115, FGDC, GCMD DIF, schema.org Dataset extension, formal publication with a DOI, and RDF with semantic markup including PROV-O, FOAF and more. In the 1990s, data documentation helped researchers locate data of interest and understand the provenance sufficiently to determine fitness for purpose. Today, providing data

  8. A Noisy 10GB Provenance Database

    SciTech Connect

    Cheah, You-Wei; Plale, Beth; Kendall-Morwick, Joey; Leake, David; Ramakrishnan, Lavanya

    2011-06-06

    Provenance of scientific data is a key piece of the metadata record for the data's ongoing discovery and reuse. Provenance collection systems capture provenance on the fly, however, the protocol between application and provenance tool may not be reliable. Consequently, the provenance record can be partial, partitioned, and simply inaccurate. We use a workflow emulator that models faults to construct a large 10GB database of provenance that we know is noisy (that is, has errors). We discuss the process of generating the provenance database, and show early results on the kinds of provenance analysis enabled by the large provenance.

  9. Provenance management in Swift with implementation details.

    SciTech Connect

    Gadelha, L. M. R; Clifford, B.; Mattoso, M.; Wilde, M.; Foster, I.

    2011-04-01

    The Swift parallel scripting language allows for the specification, execution and analysis of large-scale computations in parallel and distributed environments. It incorporates a data model for recording and querying provenance information. In this article we describe these capabilities and evaluate interoperability with other systems through the use of the Open Provenance Model. We describe Swift's provenance data model and compare it to the Open Provenance Model. We also describe and evaluate activities performed within the Third Provenance Challenge, which consisted of implementing a specific scientific workflow, capturing and recording provenance information of its execution, performing provenance queries, and exchanging provenance information with other systems. Finally, we propose improvements to both the Open Provenance Model and Swift's provenance system.

  10. Can Reaction Mechanisms Be Proven?

    NASA Astrophysics Data System (ADS)

    Buskirk, Allen; Baradaran, Hediyeh

    2009-05-01

    "Can Reaction Mechanisms Be Proven?" generated spirited responses from its reviewers. The reviews were approximately evenly divided, and all were of very high quality. The authors agreed with the editor’s proposal that the reviewers convert their reviews into rebuttals or affirmations of the authors’ position for publication along with the article, which has been revised based on the reviews. Most agreed to such a process and their comments appear here. We hope that publication of this paper and well-reasoned rebuttals such as those provided here will initiate a wide-ranging discussion. JCE will provide an online forum for further discussion of the issue. Our hope is that both faculty and students will contribute their opinions and ideas to this discussion. See Reviewer Comments: Brown Lewis Yoon Wade

  11. Provenance of the terrestrial planets.

    PubMed

    Wetherill, G W

    1994-01-01

    Earlier work on the simultaneous accumulation of the asteroid belt and the terrestrial planets is extended to investigate the relative contribution to the final planets made by material from different heliocentric distances. As before, stochastic variations intrinsic to the accumulation processes lead to a variety of final planetary configurations, but include systems having a number of features similar to our solar system. Fifty-nine new simulations are presented, from which thirteen are selected as more similar to our solar system than the others. It is found that the concept of "local feeding zones" for each final terrestrial planet has no validity for this model. Instead, the final terrestrial planets receive major contributions from bodies ranging from 0.5 to at least 2.5 AU, and often to greater distances. Nevertheless, there is a correlation between the final heliocentric distance of a planet and its average provenance. Together with the effect of stochastic fluctuations, this permits variation in the composition of the terrestrial planets, such as the difference in the decompressed density of Earth and Mars. Biologically important light elements, derived from the asteroidal region, are likely to have been significant constituents of the Earth during its formation.

  12. PROX: Approximated Summarization of Data Provenance

    PubMed Central

    Ainy, Eleanor; Bourhis, Pierre; Davidson, Susan B.; Deutch, Daniel; Milo, Tova

    2016-01-01

    Many modern applications involve collecting large amounts of data from multiple sources, and then aggregating and manipulating it in intricate ways. The complexity of such applications, combined with the size of the collected data, makes it difficult to understand the application logic and how information was derived. Data provenance has been proven helpful in this respect in different contexts; however, maintaining and presenting the full and exact provenance may be infeasible, due to its size and complex structure. For that reason, we introduce the notion of approximated summarized provenance, where we seek a compact representation of the provenance at the possible cost of information loss. Based on this notion, we have developed PROX, a system for the management, presentation and use of data provenance for complex applications. We propose to demonstrate PROX in the context of a movies rating crowd-sourcing system, letting participants view provenance summarization and use it to gain insights on the application and its underlying data. PMID:27570843

  13. Tracking Provenance in ORNL's Flexible Research Platforms

    SciTech Connect

    Hensley, Zachary P; Sanyal, Jibonananda; New, Joshua Ryan

    2013-08-01

    Provenance is dened as information about the origin of objects, a concept that applies to both physical and digital objects and often overlaps both. The use of provenance in systems designed for research is an important but forgotten feature. Provenance allows for proper and exact tracking of information, its use, its lineage, its derivations and other metadata that are important for correctly adhering to the scien- tic method. In our project's prescribed use of provenance, researchers can determine detailed information about the use of sensor data in their experiments on ORNL's Flexible Research Platforms (FRPs). Our project's provenance system, Provenance Data Management System (ProvDMS), tracks information starting with the creation of information by an FRP sensor. The system determines station information, sensor information, and sensor channel information. The system allows researchers to derive generations of experiments from the sensor data and tracks their hierarchical flow. Key points can be seen in the history of the information as part of the information's workflow. The concept of provenance and its usage in science is relatively new and while used in other cases around the world, our project's provenance diers in a key area. To keep track of provenance, most systems must be designed or redesigned around the new provenance system. Our system is designed as a cohesive but sepa- rate entity and allows for researchers to continue using their own methods of analysis without being constrained in their ways in order to track the provenance. We have designed ProvDMS using a lightweight provenance library, Core Provenance Library (CPL) v.6 In addition to keeping track of sensor data experiments and its provenance, ProvDMS also provides a web-enabled visualization of the inheritance.

  14. Distinguishing Provenance Equivalence of Earth Science Data

    NASA Technical Reports Server (NTRS)

    Tilmes, Curt; Yesha, Ye; Halem, M.

    2010-01-01

    Reproducibility of scientific research relies on accurate and precise citation of data and the provenance of that data. Earth science data are often the result of applying complex data transformation and analysis workflows to vast quantities of data. Provenance information of data processing is used for a variety of purposes, including understanding the process and auditing as well as reproducibility. Certain provenance information is essential for producing scientifically equivalent data. Capturing and representing that provenance information and assigning identifiers suitable for precisely distinguishing data granules and datasets is needed for accurate comparisons. This paper discusses scientific equivalence and essential provenance for scientific reproducibility. We use the example of an operational earth science data processing system to illustrate the application of the technique of cascading digital signatures or hash chains to precisely identify sets of granules and as provenance equivalence identifiers to distinguish data made in an an equivalent manner.

  15. Special Issue: The First Provenance Challenge

    SciTech Connect

    Moreau, Luc; Ludaescher, Bertram T.; Altintas, Ilkay; Barga, Roger S.; Bowers, Shawn; Callahan, Steven P.; Chin, George; Clifford, Ben; Cohen, Shirley; Cohen-Boulakia, Sarah; Davidson, Susan; Deelman, Ewa; digiampietri, Luciano; Foster, Ian T.; Freire, Juliana; Frew, James; Futrelle, Joe; Gibson, Tara D.; Gil, Yolanda; Goble, Carole; Golbeck, Jennifer; Groth, Paul; Holland, David A.; Jiang, Sheng; Kim, Jihie; Koop, David; Krenek, Ales; McPhillips, Timothy; Mehta, Gaurang; Miles, Simon; Metzger, Dominic; Munroe, Steve; Myers, James D.; Plale, Beth A.; Podhorszki, norbert; Ratnakar, Varun; Emanuele , Santos; scheidegger, Carlos E.; Schuchardt, Karen L.; Seltzer, Margo I.; Simmhan, Yogesh L.; Claudio, Silva T.; Slaughter, Peter; Stephan, Eric G.; Stevens, Robert; Turi, Daniele; Vo, Huy T.; Wilde, Mike J.; Zhao, Jun; Zhao, Yong

    2008-04-01

    The first Provenance Challenge was set up in order to provide a forum for the community to help understand the capabilities of different provenance systems and the expressiveness of their provenance representations. To this end, a Functional Magnetic Resonance Imaging workflow was defined, which participants had to either simulate or run in order to produce some provenance representation, from which a set of identified queries had to be implemented and executed. Sixteen teams responded to the challenge, and submitted their inputs. In this paper, we present the challenge workflow and queries, and summarise the participants contributions.

  16. Launch Services, a Proven Model

    NASA Astrophysics Data System (ADS)

    Trafton, W. C.; Simpson, J.

    2002-01-01

    From a commercial perspective, the ability to justify "leap frog" technology such as reusable systems has been difficult to justify because the estimated 5B to 10B investment is not supported in the current flat commercial market coupled with an oversupply of launch service suppliers. The market simply does not justify investment of that magnitude. Currently, next generation Expendable Launch Systems, including Boeing's Delta IV, Lockheed Martin's Atlas 5, Ariane V ESCA and RSC's H-IIA are being introduced into operations signifying that only upgrades to proven systems are planned to meet the changes in anticipated satellite demand (larger satellites, more lifetime, larger volumes, etc.) in the foreseeable future. We do not see a new fleet of ELVs emerging beyond that which is currently being introduced, only continuous upgrades of the fleet to meet the demands. To induce a radical change in the provision of launch services, a Multinational Government investment must be made and justified by World requirements. The commercial market alone cannot justify such an investment. And if an investment is made, we cannot afford to repeat previous mistakes by relying on one system such as shuttle for commercial deployment without having any back-up capability. Other issues that need to be considered are national science and security requirements, which to a large extent fuels the Japanese, Chinese, Indian, Former Soviet Union, European and United States space transportation entries. Additionally, this system must support or replace current Space Transportation Economies with across-the-board benefits. For the next 10 to 20 years, Multinational cooperation will be in the form of piecing together launch components and infrastructure to supplement existing launch systems and reducing the amount of non-recurring investment while meeting the future requirements of the End-User. Virtually all of the current systems have some form of multinational participation: Sea Launch

  17. Tracking Provenance of Earth Science Data

    NASA Technical Reports Server (NTRS)

    Tilmes, Curt; Yesha, Yelena; Halem, Milton

    2010-01-01

    Tremendous volumes of data have been captured, archived and analyzed. Sensors, algorithms and processing systems for transforming and analyzing the data are evolving over time. Web Portals and Services can create transient data sets on-demand. Data are transferred from organization to organization with additional transformations at every stage. Provenance in this context refers to the source of data and a record of the process that led to its current state. It encompasses the documentation of a variety of artifacts related to particular data. Provenance is important for understanding and using scientific datasets, and critical for independent confirmation of scientific results. Managing provenance throughout scientific data processing has gained interest lately and there are a variety of approaches. Large scale scientific datasets consisting of thousands to millions of individual data files and processes offer particular challenges. This paper uses the analogy of art history provenance to explore some of the concerns of applying provenance tracking to earth science data. It also illustrates some of the provenance issues with examples drawn from the Ozone Monitoring Instrument (OMI) Data Processing System (OMIDAPS) run at NASA's Goddard Space Flight Center by the first author.

  18. An R package for statistical provenance analysis

    NASA Astrophysics Data System (ADS)

    Vermeesch, Pieter; Resentini, Alberto; Garzanti, Eduardo

    2016-05-01

    This paper introduces provenance, a software package within the statistical programming environment R, which aims to facilitate the visualisation and interpretation of large amounts of sedimentary provenance data, including mineralogical, petrographic, chemical and isotopic provenance proxies, or any combination of these. provenance comprises functions to: (a) calculate the sample size required to achieve a given detection limit; (b) plot distributional data such as detrital zircon U-Pb age spectra as Cumulative Age Distributions (CADs) or adaptive Kernel Density Estimates (KDEs); (c) plot compositional data as pie charts or ternary diagrams; (d) correct the effects of hydraulic sorting on sandstone petrography and heavy mineral composition; (e) assess the settling equivalence of detrital minerals and grain-size dependence of sediment composition; (f) quantify the dissimilarity between distributional data using the Kolmogorov-Smirnov and Sircombe-Hazelton distances, or between compositional data using the Aitchison and Bray-Curtis distances; (e) interpret multi-sample datasets by means of (classical and nonmetric) Multidimensional Scaling (MDS) and Principal Component Analysis (PCA); and (f) simplify the interpretation of multi-method datasets by means of Generalised Procrustes Analysis (GPA) and 3-way MDS. All these tools can be accessed through an intuitive query-based user interface, which does not require knowledge of the R programming language. provenance is free software released under the GPL-2 licence and will be further expanded based on user feedback.

  19. Coloring RDF Triples to Capture Provenance

    NASA Astrophysics Data System (ADS)

    Flouris, Giorgos; Fundulaki, Irini; Pediaditis, Panagiotis; Theoharis, Yannis; Christophides, Vassilis

    Recently, the W3C Linking Open Data effort has boosted the publication and inter-linkage of large amounts of RDF datasets on the Semantic Web. Various ontologies and knowledge bases with millions of RDF triples from Wikipedia and other sources, mostly in e-science, have been created and are publicly available. Recording provenance information of RDF triples aggregated from different heterogeneous sources is crucial in order to effectively support trust mechanisms, digital rights and privacy policies. Managing provenance becomes even more important when we consider not only explicitly stated but also implicit triples (through RDFS inference rules) in conjunction with declarative languages for querying and updating RDF graphs. In this paper we rely on colored RDF triples represented as quadruples to capture and manipulate explicit provenance information.

  20. Sediment generation and provenance: processes and pathways

    NASA Astrophysics Data System (ADS)

    Caracciolo, L.; Garzanti, E.; von Eynatten, H.; Weltje, G. J.

    2016-05-01

    The ability to trace sediments from their sources to sedimentary basins is a prerequisite for quantitative analysis of Earth-surface dynamics. The comparatively recent revival of sedimentary provenance analysis goes hand-in-hand with the ever expanding range of analytical tools available for quantifying sediment properties (isotopic, mineral, chemical, and petrographic composition, grain-size and shape distributions, age spectra, etc.), and for interpreting such data in paleo-geographic, -tectonic and -climatic terms. The breakdown of sediment budgets into source-specific contributions - one of the most important tasks of provenance analysis - permits quantification of rates of surface processes in the geological past ("deep time"), even in cases where the source areas themselves have been destroyed by global tectonics. Quantitative sedimentary provenance analysis is therefore crucial to the reconstruction of ancient sediment-routing systems, the fundamental units of mass transfer at the Earth's surface.

  1. Analysis Traceability and Provenance for HEP

    NASA Astrophysics Data System (ADS)

    Shamdasani, Jetendr; McClatchey, Richard; Branson, Andrew; Kovács, Zsolt

    2015-12-01

    This paper presents the use of the CRISTAL software in the N4U project. CRISTAL was used to create a set of provenance aware analysis tools for the Neuroscience domain. This paper advocates that the approach taken in N4U to build the analysis suite is sufficiently generic to be able to be applied to the HEP domain. A mapping to the PROV model for provenance interoperability is also presented and how this can be applied to the HEP domain for the interoperability of HEP analyses.

  2. Applying Content Management to Automated Provenance Capture

    SciTech Connect

    Schuchardt, Karen L.; Gibson, Tara D.; Stephan, Eric G.; Chin, George

    2008-04-10

    Workflows and data pipelines are becoming increasingly valuable in both computational and experimen-tal sciences. These automated systems are capable of generating significantly more data within the same amount of time than their manual counterparts. Automatically capturing and recording data prove-nance and annotation as part of these workflows is critical for data management, verification, and dis-semination. Our goal in addressing the provenance challenge was to develop and end-to-end system that demonstrates real-time capture, persistent content management, and ad-hoc searches of both provenance and metadata using open source software and standard protocols. We describe our prototype, which extends the Kepler workflow tools for the execution environment, the Scientific Annotation Middleware (SAM) content management software for data services, and an existing HTTP-based query protocol. Our implementation offers several unique capabilities, and through the use of standards, is able to pro-vide access to the provenance record to a variety of commonly available client tools.

  3. Characterizing Provenance in Visualization and Data Analysis: An Organizational Framework of Provenance Types and Purposes.

    PubMed

    Ragan, Eric D; Endert, Alex; Sanyal, Jibonananda; Chen, Jian

    2016-01-01

    While the primary goal of visual analytics research is to improve the quality of insights and findings, a substantial amount of research in provenance has focused on the history of changes and advances throughout the analysis process. The term, provenance, has been used in a variety of ways to describe different types of records and histories related to visualization. The existing body of provenance research has grown to a point where the consolidation of design knowledge requires cross-referencing a variety of projects and studies spanning multiple domain areas. We present an organizational framework of the different types of provenance information and purposes for why they are desired in the field of visual analytics. Our organization is intended to serve as a framework to help researchers specify types of provenance and coordinate design knowledge across projects. We also discuss the relationships between these factors and the methods used to capture provenance information. In addition, our organization can be used to guide the selection of evaluation methodology and the comparison of study outcomes in provenance research.

  4. Characterizing Provenance in Visualization and Data Analysis: An Organizational Framework of Provenance Types and Purposes

    DOE PAGES

    Ragan, Eric; Alex, Endert; Sanyal, Jibonananda; Chen, Jian

    2016-01-01

    While the primary goal of visual analytics research is to improve the quality of insights and findings, a substantial amount of research in provenance has focused on the history of changes and advances throughout the analysis process. The term, provenance, has been used in a variety of ways to describe different types of records and histories related to visualization. The existing body of provenance research has grown to a point where the consolidation of design knowledge requires cross-referencing a variety of projects and studies spanning multiple domain areas. We present an organizational framework of the different types of provenance informationmore » and purposes for why they are desired in the field of visual analytics. Our organization is intended to serve as a framework to help researchers specify types of provenance and coordinate design knowledge across projects. We also discuss the relationships between these factors and the methods used to capture provenance information. In addition, our organization can be used to guide the selection of evaluation methodology and the comparison of study outcomes in provenance research« less

  5. Characterizing Provenance in Visualization and Data Analysis: An Organizational Framework of Provenance Types and Purposes

    SciTech Connect

    Ragan, Eric; Alex, Endert; Sanyal, Jibonananda; Chen, Jian

    2016-01-01

    While the primary goal of visual analytics research is to improve the quality of insights and findings, a substantial amount of research in provenance has focused on the history of changes and advances throughout the analysis process. The term, provenance, has been used in a variety of ways to describe different types of records and histories related to visualization. The existing body of provenance research has grown to a point where the consolidation of design knowledge requires cross-referencing a variety of projects and studies spanning multiple domain areas. We present an organizational framework of the different types of provenance information and purposes for why they are desired in the field of visual analytics. Our organization is intended to serve as a framework to help researchers specify types of provenance and coordinate design knowledge across projects. We also discuss the relationships between these factors and the methods used to capture provenance information. In addition, our organization can be used to guide the selection of evaluation methodology and the comparison of study outcomes in provenance research

  6. PAV ontology: provenance, authoring and versioning

    PubMed Central

    2013-01-01

    Background Provenance is a critical ingredient for establishing trust of published scientific content. This is true whether we are considering a data set, a computational workflow, a peer-reviewed publication or a simple scientific claim with supportive evidence. Existing vocabularies such as Dublin Core Terms (DC Terms) and the W3C Provenance Ontology (PROV-O) are domain-independent and general-purpose and they allow and encourage for extensions to cover more specific needs. In particular, to track authoring and versioning information of web resources, PROV-O provides a basic methodology but not any specific classes and properties for identifying or distinguishing between the various roles assumed by agents manipulating digital artifacts, such as author, contributor and curator. Results We present the Provenance, Authoring and Versioning ontology (PAV, namespace http://purl.org/pav/): a lightweight ontology for capturing “just enough” descriptions essential for tracking the provenance, authoring and versioning of web resources. We argue that such descriptions are essential for digital scientific content. PAV distinguishes between contributors, authors and curators of content and creators of representations in addition to the provenance of originating resources that have been accessed, transformed and consumed. We explore five projects (and communities) that have adopted PAV illustrating their usage through concrete examples. Moreover, we present mappings that show how PAV extends the W3C PROV-O ontology to support broader interoperability. Method The initial design of the PAV ontology was driven by requirements from the AlzSWAN project with further requirements incorporated later from other projects detailed in this paper. The authors strived to keep PAV lightweight and compact by including only those terms that have demonstrated to be pragmatically useful in existing applications, and by recommending terms from existing ontologies when plausible. Discussion

  7. Obsidian provenance research in the Americas.

    PubMed

    Glascock, Michael D

    2002-08-01

    The characterization of archaeological materials to support provenance research has grown rapidly over the past few decades. Volcanic obsidian has several unique properties that make it the ideal archaeological material for studying prehistoric trade and exchange. This Account describes our laboratory's development of a systematic methodology for the characterization of obsidian sources and artifacts from Mesoamerica and other regions of North and South America in support of archaeological research. PMID:12186565

  8. Obsidian provenance research in the Americas.

    PubMed

    Glascock, Michael D

    2002-08-01

    The characterization of archaeological materials to support provenance research has grown rapidly over the past few decades. Volcanic obsidian has several unique properties that make it the ideal archaeological material for studying prehistoric trade and exchange. This Account describes our laboratory's development of a systematic methodology for the characterization of obsidian sources and artifacts from Mesoamerica and other regions of North and South America in support of archaeological research.

  9. Functions and possible provenance of primordial proteins.

    PubMed

    Sommer, Andrei P; Miyake, Norimune; Wickramasinghe, N Chandra; Narlikar, Jayant V; Al-Mufti, Shirwan

    2004-01-01

    Nanobacteria or living nanovesicles are of great interest to the scientific community because of their dual nature: on the one hand, they appear as primal biosystems originating life; on the other hand, they can cause severe diseases. Their survival as well as their pathogenic potential is apparently linked to a self-synthesized protein-based slime, rich in calcium and phosphate (when available). Here, we provide challenging evidence for the occurrence of nanobacteria in the stratosphere, reflecting a possibly primordial provenance of the slime. An analysis of the slime's biological functions may lead to novel strategies suitable to block adhesion modalities in modern bacterial populations. PMID:15595742

  10. Data Provenance in Photogrammetry Through Documentation Protocols

    NASA Astrophysics Data System (ADS)

    Carboni, N.; Bruseker, G.; Guillem, A.; Bellido Castañeda, D.; Coughenour, C.; Domajnko, M.; de Kramer, M.; Ramos Calles, M. M.; Stathopoulou, E. K.; Suma, R.

    2016-06-01

    Documenting the relevant aspects in digitisation processes such as photogrammetry in order to provide a robust provenance for their products continues to present a challenge. The creation of a product that can be re-used scientifically requires a framework for consistent, standardised documentation of the entire digitisation pipeline. This article provides an analysis of the problems inherent to such goals and presents a series of protocols to document the various steps of a photogrammetric workflow. We propose this pipeline, with descriptors to track all phases of digital product creation in order to assure data provenance and enable the validation of the operations from an analytic and production perspective. The approach aims to support adopters of the workflow to define procedures with a long term perspective. The conceptual schema we present is founded on an analysis of information and actor exchanges in the digitisation process. The metadata were defined through the synthesis of previous proposals in this area and were tested on a case study. We performed the digitisation of a set of cultural heritage artefacts from an Iron Age burial in Ilmendorf, Germany. The objects were captured and processed using different techniques, including a comparison of different imaging tools and algorithms. This augmented the complexity of the process allowing us to test the flexibility of the schema for documenting complex scenarios. Although we have only presented a photogrammetry digitisation scenario, we claim that our schema is easily applicable to a multitude of 3D documentation processes.

  11. Actualistic Ophiolite Provenance: The Cyprus Case.

    PubMed

    Garzanti; Andò; Scutellà

    2000-03-01

    The island of Cyprus represents an excellent site to assess quantitatively petrologic clastic response to actively obducting oceanic sources in order to define an actualistic reference for ophiolite provenance, in terms of framework composition and heavy mineral suites. An improved methodology, an extension of the classic ternary QFL logic to include a wider spectrum of key indexes and ratios, provides an accurate synthesis of modal data and allows differentiation of three main petrographic provinces and at least seven subprovinces. Diagnostic signatures of detritus from various levels of an oceanic lithospheric source, and criteria for distinguishing provenance from suprasubduction versus mid-oceanic ophiolites are also outlined. Modern sands derived from the Troodos Ophiolite contain variable proportions of largely pelagic carbonate to chert, boninite to basalt, diabase to metabasite, plagiogranite to gabbroic, and cumulate grains supplied from progressively deeper-seated levels of the multilayered oceanic crust. Dense minerals are mainly clinopyroxenes (diopside), prevailing over orthopyroxenes (enstatite, hypersthene, clinoenstatite), hornblende, tremolite/actinolite, and epidote. Where serpentinized mantle harzburgites have been unroofed, detritus is markedly enriched in cellular serpentinite grains and enstatite, with still negligible olivine and spinel. Sedimentaclastic sands dominated by chert (Mamonia Province) or carbonate grains (Kyrenia Province) are deposited along the southern and northern shores of the island, respectively. Compositions of Cyprus sands are virtually unaffected by climatic, sedimentary, or anthropic processes; recycling of sandstones from foreign sources is a major process only in the Karpaz Peninsula. Petrographic analysis also provides an independent mean to identify prevalent directions of longshore sand transport.

  12. Actualistic Ophiolite Provenance: The Cyprus Case.

    PubMed

    Garzanti; Andò; Scutellà

    2000-03-01

    The island of Cyprus represents an excellent site to assess quantitatively petrologic clastic response to actively obducting oceanic sources in order to define an actualistic reference for ophiolite provenance, in terms of framework composition and heavy mineral suites. An improved methodology, an extension of the classic ternary QFL logic to include a wider spectrum of key indexes and ratios, provides an accurate synthesis of modal data and allows differentiation of three main petrographic provinces and at least seven subprovinces. Diagnostic signatures of detritus from various levels of an oceanic lithospheric source, and criteria for distinguishing provenance from suprasubduction versus mid-oceanic ophiolites are also outlined. Modern sands derived from the Troodos Ophiolite contain variable proportions of largely pelagic carbonate to chert, boninite to basalt, diabase to metabasite, plagiogranite to gabbroic, and cumulate grains supplied from progressively deeper-seated levels of the multilayered oceanic crust. Dense minerals are mainly clinopyroxenes (diopside), prevailing over orthopyroxenes (enstatite, hypersthene, clinoenstatite), hornblende, tremolite/actinolite, and epidote. Where serpentinized mantle harzburgites have been unroofed, detritus is markedly enriched in cellular serpentinite grains and enstatite, with still negligible olivine and spinel. Sedimentaclastic sands dominated by chert (Mamonia Province) or carbonate grains (Kyrenia Province) are deposited along the southern and northern shores of the island, respectively. Compositions of Cyprus sands are virtually unaffected by climatic, sedimentary, or anthropic processes; recycling of sandstones from foreign sources is a major process only in the Karpaz Peninsula. Petrographic analysis also provides an independent mean to identify prevalent directions of longshore sand transport. PMID:10736270

  13. A unified framework for managing provenance information in translational research

    PubMed Central

    2011-01-01

    Background A critical aspect of the NIH Translational Research roadmap, which seeks to accelerate the delivery of "bench-side" discoveries to patient's "bedside," is the management of the provenance metadata that keeps track of the origin and history of data resources as they traverse the path from the bench to the bedside and back. A comprehensive provenance framework is essential for researchers to verify the quality of data, reproduce scientific results published in peer-reviewed literature, validate scientific process, and associate trust value with data and results. Traditional approaches to provenance management have focused on only partial sections of the translational research life cycle and they do not incorporate "domain semantics", which is essential to support domain-specific querying and analysis by scientists. Results We identify a common set of challenges in managing provenance information across the pre-publication and post-publication phases of data in the translational research lifecycle. We define the semantic provenance framework (SPF), underpinned by the Provenir upper-level provenance ontology, to address these challenges in the four stages of provenance metadata: (a) Provenance collection - during data generation (b) Provenance representation - to support interoperability, reasoning, and incorporate domain semantics (c) Provenance storage and propagation - to allow efficient storage and seamless propagation of provenance as the data is transferred across applications (d) Provenance query - to support queries with increasing complexity over large data size and also support knowledge discovery applications We apply the SPF to two exemplar translational research projects, namely the Semantic Problem Solving Environment for Trypanosoma cruzi (T.cruzi SPSE) and the Biomedical Knowledge Repository (BKR) project, to demonstrate its effectiveness. Conclusions The SPF provides a unified framework to effectively manage provenance of translational

  14. Titian: Data Provenance Support in Spark

    PubMed Central

    Interlandi, Matteo; Shah, Kshitij; Tetali, Sai Deep; Gulzar, Muhammad Ali; Yoo, Seunghyun; Kim, Miryung; Millstein, Todd; Condie, Tyson

    2015-01-01

    Debugging data processing logic in Data-Intensive Scalable Computing (DISC) systems is a difficult and time consuming effort. Today’s DISC systems offer very little tooling for debugging programs, and as a result programmers spend countless hours collecting evidence (e.g., from log files) and performing trial and error debugging. To aid this effort, we built Titian, a library that enables data provenance—tracking data through transformations—in Apache Spark. Data scientists using the Titian Spark extension will be able to quickly identify the input data at the root cause of a potential bug or outlier result. Titian is built directly into the Spark platform and offers data provenance support at interactive speeds—orders-of-magnitude faster than alternative solutions—while minimally impacting Spark job performance; observed overheads for capturing data lineage rarely exceed 30% above the baseline job execution time. PMID:26726305

  15. Standardized wellheads proven economical for subsea operations

    SciTech Connect

    Moreira, C.C.; Silva Paulo, C.A. )

    1994-05-02

    A standardization program for subsea wellheads and completion equipment has made development of Brazil's offshore fields more economical and efficient. The resulting operational flexibility associated with the use of field-proven equipment and procedures saves rig time and can reduce production loss during workovers. Additionally, investments can be rationalized economically by installing part of the completion equipment at the end of the drilling job and then delaying purchase and installation of the christmas tree and the flow lines until installation of the production platform. Savings are also realized from the reduction in the number of spare parts and tools. Moreover, the savings related to improved operations exceed considerably those from equipment acquisition and storage. Thus, the greatest benefit is the operational flexibility. The paper discusses initial standards, the subsea programs, philosophy, implementation, diver-assisted trees, diverless trees, and economics.

  16. Scientific Workflows + Provenance = Better (Meta-)Data Management

    NASA Astrophysics Data System (ADS)

    Ludaescher, B.; Cuevas-Vicenttín, V.; Missier, P.; Dey, S.; Kianmajd, P.; Wei, Y.; Koop, D.; Chirigati, F.; Altintas, I.; Belhajjame, K.; Bowers, S.

    2013-12-01

    The origin and processing history of an artifact is known as its provenance. Data provenance is an important form of metadata that explains how a particular data product came about, e.g., how and when it was derived in a computational process, which parameter settings and input data were used, etc. Provenance information provides transparency and helps to explain and interpret data products. Other common uses and applications of provenance include quality control, data curation, result debugging, and more generally, 'reproducible science'. Scientific workflow systems (e.g. Kepler, Taverna, VisTrails, and others) provide controlled environments for developing computational pipelines with built-in provenance support. Workflow results can then be explained in terms of workflow steps, parameter settings, input data, etc. using provenance that is automatically captured by the system. Scientific workflows themselves provide a user-friendly abstraction of the computational process and are thus a form of ('prospective') provenance in their own right. The full potential of provenance information is realized when combining workflow-level information (prospective provenance) with trace-level information (retrospective provenance). To this end, the DataONE Provenance Working Group (ProvWG) has developed an extension of the W3C PROV standard, called D-PROV. Whereas PROV provides a 'least common denominator' for exchanging and integrating provenance information, D-PROV adds new 'observables' that described workflow-level information (e.g., the functional steps in a pipeline), as well as workflow-specific trace-level information ( timestamps for each workflow step executed, the inputs and outputs used, etc.) Using examples, we will demonstrate how the combination of prospective and retrospective provenance provides added value in managing scientific data. The DataONE ProvWG is also developing tools based on D-PROV that allow scientists to get more mileage from provenance metadata

  17. Provenance of Norphlet sandstone, northern Gulf Coast

    SciTech Connect

    Ryan, W.P.; Ward, W.C.; Kuglar, R.L.

    1987-09-01

    The Upper Jurassic Norphlet sandstone of the northern Gulf Coast is predominantly subarkose, with some arkose in the eastern area and sublitharenite and quartzarenite in the western area. Despite great depths of burial and despite feldspar and rock-fragment constituents, diagenesis has not appreciably altered the composition of Norphlet sandstone. Therefore, reconstruction of original composition of Norphlet sandstone presented little difficulty. Variation in detrital modes of the Norphlet suggests compositionally distinct source terranes. Samples from Florida, Alabama, and Mississippi reflect the influence of metamorphic and plutonic rocks of the Appalachian Piedmont Province and of Triassic-Jurassic volcanic rocks. Sandstones in east Texas, northern Louisiana, and southern Arkansas were derived from sedimentary and metasedimentary rocks of the Ouachita system. The Arbuckle Mountains and Llano uplift may have supplied trace amounts of quartzo-feldspathic and volcanic-rock fragments to the extreme western part of the study area. Norphlet sandstones represent a mixture of collision-orogen-derived sediment from the Appalachian and/or Ouachita system and continental-block-derived sediment from paleohighs and uplifts within the Gulf basin. However, Norphlet sandstones plot in the craton-interior and transitional-continental fields on Q-F-L and QM-F-Lt tectonic-provenance diagrams, because of mineralogically mature source rocks, elimination of unstable grains by abrasion and sorting during deposition, and/or sediment mixing from different source terranes.

  18. Mineralogical and geochemical evidence of Quachita provenance

    SciTech Connect

    Sutton, S.J. . Dept. of Earth Resources); Land, L.S.; Hutson, F. . Dept. of Geological Science); Awwiller, D.N. . Dept. of Geology)

    1994-03-01

    Provenance of the extremely thick Ouachita flysch has not been specifically identified, despite several recent studies. Detrital mineral compositions, Sm-Nd model ages, and single zircon dates strongly suggest that several sources contributed sediment that became well-mixed before deposition. Sm-Nd model ages are nearly uniform for flysch samples, regardless of geographic position or exact stratigraphic position. These ages appear to rule out significant contribution by a Paleozoic island arc, and suggest a single source, multiple sources with similar model ages, or thorough mixing of sources with different model ages. In contrast, single zircon ages are variable, including Archean, Proterozoic, and Paleozoic ages. These ages indicate multiple sediment sources, including some external to North America. The zircon ages, however, may not be generally representative of Ouachita sediment sources because they were obtained on zircons far larger than typical Ouachita detrital zircons. The Sm-Nd model ages and single zircon ages can both be explained if sediment entering the Ouachita Trough came from multiple sources, but was already thoroughly mixed before entering the trough. Such mixing is also suggested by detrital mineral analyses. Muscovite, garnet, and tourmaline have been analyzed.

  19. Data Provenance Architecture for the Geosciences

    NASA Astrophysics Data System (ADS)

    Murphy, F.; Irving, D. H.

    2012-12-01

    The pace at which geoscientific insights inform societal development quickens with time and these insights drive decisions and actions of ever-increasing human and economic significance. Until recently academic, commercial and government bodies have maintained distinct bodies of knowledge to support scientific enquiry as well as societal development. However, it has become clear that the curation of the body of data is an activity of equal or higher social and commercial value. We address the community challenges in the curation of, access to, and analysis of scientific data including: the tensions between creators, providers and users; incentives and barriers to sharing; ownership and crediting. We also discuss the technical and financial challenges in maximising the return on the effort made in generating geoscientific data. To illustrate how these challenges might be addressed in the broader geoscientific domain, we describe the high-level data governance and analytical architecture in the upstream Oil Industry. This domain is heavily dependent on costly and highly diverse geodatasets collected and assimilated over timeframes varying from seconds to decades. These data must support both operational decisions at the minute-hour timefame and strategic and economic decisions of enterprise or national scale, and yet be sufficiently robust to last the life of a producing field. We develop three themes around data provenance, data ownership and business models for data curation. 1/ The overarching aspiration is to ensure that data provenance and quality is maintained along the analytical workflow. Hence if data on which a publication or report changes, the report and its publishers can be notified and we describe a mechanism by which dependent knowledge products can be flagged. 2/ From a cost and management point of view we look at who "owns" data especially in cases where the cost of curation and stewardship is significant compared to the cost of acquiring the data

  20. Key Provenance of Earth Science Observational Data Products

    NASA Astrophysics Data System (ADS)

    Conover, H.; Plale, B.; Aktas, M.; Ramachandran, R.; Purohit, P.; Jensen, S.; Graves, S. J.

    2011-12-01

    As the sheer volume of data increases, particularly evidenced in the earth and environmental sciences, local arrangements for sharing data need to be replaced with reliable records about the what, who, how, and where of a data set or collection. This is frequently called the provenance of a data set. While observational data processing systems in the earth sciences have a long history of capturing metadata about the processing pipeline, current processes are limited in both what is captured and how it is disseminated to the science community. Provenance capture plays a role in scientific data preservation and stewardship precisely because it can automatically capture and represent a coherent picture of the what, how and who of a particular scientific collection. It reflects the transformations that a data collection underwent prior to its current form and the sequence of tasks that were executed and data products applied to generate a new product. In the NASA-funded Instant Karma project, we examine provenance capture in earth science applications, specifically the Advanced Microwave Scanning Radiometer - Earth Observing System (AMSR-E) Science Investigator-led Processing system (SIPS). The project is integrating the Karma provenance collection and representation tool into the AMSR-E SIPS production environment, with an initial focus on Sea Ice. This presentation will describe capture and representation of provenance that is guided by the Open Provenance Model (OPM). Several things have become clear during the course of the project to date. One is that core OPM entities and relationships are not adequate for expressing the kinds of provenance that is of interest in the science domain. OPM supports name-value pair annotations that can be used to augment what is known about the provenance entities and relationships, but in Karma, annotations cannot be added during capture, but only after the fact. This limits the capture system's ability to record something it

  1. Automatic Provenance Recording for Scientific Data using Trident

    NASA Astrophysics Data System (ADS)

    Simmhan, Y.; Barga, R.; van Ingen, C.

    2008-12-01

    Provenance is increasingly recognized as being critical to the understanding and reuse of scientific datasets. Given the rapid generation of scientific data from sensors and computational model results, it is not practical to manually record provenance for data and automated techniques for provenance capture are essential. Scientific workflows provide a framework for representing computational models and complex transformations of scientific data, and present a means for tracking the operations performed to derive a dataset. The Trident Scientific Workbench is a workflow system that natively incorporates provenance capture of data derived as part of the workflow execution. The applications used as part of a Trident workflow can execute on a remote computational cluster, such as a supercomputing center on in the Cloud, or on the local desktop of the researcher, and provenance on data derived by the applications is seamlessly captured. Scientists also have the option to annotate the provenance metadata using domain specific tags such as, for example, GCMD keywords. The provenance records thus captured can be exported in the Open Provenance Model* XML format that is emerging as a provenance standard in the eScience community or visualized as a graph of data and applications. The Trident workflow system and provenance recorded by it has been successfully applied in the Neptune oceanography project and is presently being tested in the Pan-STARRS astronomy project. *http://twiki.ipaw.info/bin/view/Challenge/OPM

  2. The provenance of Taklamakan desert sand

    NASA Astrophysics Data System (ADS)

    Rittner, Martin; Vermeesch, Pieter; Carter, Andrew; Bird, Anna; Stevens, Thomas; Garzanti, Eduardo; Andò, Sergio; Vezzoli, Giovanni; Dutt, Ripul; Xu, Zhiwei; Lu, Huayu

    2016-03-01

    Sand migration in the vast Taklamakan desert within the Tarim Basin (Xinjiang Uyghur Autonomous region, PR China) is governed by two competing transport agents: wind and water, which work in diametrically opposed directions. Net aeolian transport is from northeast to south, while fluvial transport occurs from the south to the north and then west to east at the northern rim, due to a gradual northward slope of the underlying topography. We here present the first comprehensive provenance study of Taklamakan desert sand with the aim to characterise the interplay of these two transport mechanisms and their roles in the formation of the sand sea, and to consider the potential of the Tarim Basin as a contributing source to the Chinese Loess Plateau (CLP). Our dataset comprises 39 aeolian and fluvial samples, which were characterised by detrital-zircon U-Pb geochronology, heavy-mineral, and bulk-petrography analyses. Although the inter-sample differences of all three datasets are subtle, a multivariate statistical analysis using multidimensional scaling (MDS) clearly shows that Tarim desert sand is most similar in composition to rivers draining the Kunlun Shan (south) and the Pamirs (west), and is distinctly different from sediment sources in the Tian Shan (north). A small set of samples from the Junggar Basin (north of the Tian Shan) yields different detrital compositions and age spectra than anywhere in the Tarim Basin, indicating that aeolian sediment exchange between the two basins is minimal. Although river transport dominates delivery of sand into the Tarim Basin, wind remobilises and reworks the sediment in the central sand sea. Characteristic signatures of main rivers can be traced from entrance into the basin to the terminus of the Tarim River, and those crossing the desert from the south to north can seasonally bypass sediment through the sand sea. Smaller ephemeral rivers from the Kunlun Shan end in the desert and discharge their sediment there. Both river run

  3. Application of Named Graphs Towards Custom Provenance Views

    SciTech Connect

    Gibson, Tara D.; Schuchardt, Karen L.; Stephan, Eric G.

    2009-02-10

    Provenance capture as applied to execution oriented and interactive workflows is designed to record minute detail needed to support a "modify and restart" paradigm as well as re-execution of past workflows. In our experience, provenance also plays an important role in human-centered verification, results tracking, and knowledge sharing. To enable this we must overcome the low level of detail received from most provenance capture mechanisms and pre-sent it in a user oriented view. In this paper, we present a design which leverages named graphs to create and man-age views as a server-side function, simplifying user presentation of provenance data.

  4. The Symbiotic Relationship between Scientific Workflow and Provenance (Invited)

    NASA Astrophysics Data System (ADS)

    Stephan, E.

    2010-12-01

    The purpose of this presentation is to describe the symbiotic nature of scientific workflows and provenance. We will also discuss the current trends and real world challenges facing these two distinct research areas. Although motivated differently, the needs of the international science communities are the glue that binds this relationship together. Understanding and articulating the science drivers to these communities is paramount as these technologies evolve and mature. Originally conceived for managing business processes, workflows are now becoming invaluable assets in both computational and experimental sciences. These reconfigurable, automated systems provide essential technology to perform complex analyses by coupling together geographically distributed disparate data sources and applications. As a result, workflows are capable of higher throughput in a shorter amount of time than performing the steps manually. Today many different workflow products exist; these could include Kepler and Taverna or similar products like MeDICI, developed at PNNL, that are standardized on the Business Process Execution Language (BPEL). Provenance, originating from the French term Provenir “to come from”, is used to describe the curation process of artwork as art is passed from owner to owner. The concept of provenance was adopted by digital libraries as a means to track the lineage of documents while standards such as the DublinCore began to emerge. In recent years the systems science community has increasingly expressed the need to expand the concept of provenance to formally articulate the history of scientific data. Communities such as the International Provenance and Annotation Workshop (IPAW) have formalized a provenance data model. The Open Provenance Model, and the W3C is hosting a provenance incubator group featuring the Proof Markup Language. Although both workflows and provenance have risen from different communities and operate independently, their mutual

  5. DataONE: A Data Federation with Provenance Support

    SciTech Connect

    Cao, Yang; Jones, Christopher; Cuevas-Vicenttin, Victor; Jones, Matthew B.; Ludascher, Bertram; McPhillips, Timothy; Missier, Paolo; Schwalm, Christopher; Slaughter, Peter; Vieglais, Dave; Walker, Lauren

    2016-01-01

    DataONE is a federated data network focusing on earth and environmental science data. We present the provenance and search features of DataONE by means of an example involving three earth scientists who interact through a DataONE Member Node. DataONE provenance systems enable reproducible research and facilitate proper attribution of scientific results transitively across generations of derived data products.

  6. Automatic run-time provenance capture for scientific dataset generation

    NASA Astrophysics Data System (ADS)

    Frew, J.; Slaughter, P.

    2008-12-01

    Provenance---the directed graph of a dataset's processing history---is difficult to capture effectively. Human- generated provenance, as narrative metadata, is labor-intensive and thus often incorrect, incomplete, or simply not recorded. Workflow systems capture some provenance implicitly in workflow specifications, but these systems are not ubiquitous or standardized, and a workflow specification may not capture all of the factors involved in a dataset's production. System audit trails capture potentially all processing activities, but not the relationships between them. We describe a system that transparently (i.e., without any modification to science codes) and automatically (i.e. without any human intervention) captures the low-level interactions (files read/written, parameters accessed, etc.) between scientific processes, and then synthesizes these relationships into a provenance graph. This system---the Earth System Science Server (ES3)---is sufficiently general that it can accommodate any combination of stand-alone programs, interpreted codes (e.g. IDL), and command- language scripts. Provenance in ES3 can be published in well-defined XML formats (including formats suitable for graphical visualization), and queried to determine the ancestors or descendants of any specific data file or process invocation. We demonstrate how ES3 can be used to capture the provenance of a large operational ocean color dataset.

  7. Restful Implementation of Catalogue Service for Geospatial Data Provenance

    NASA Astrophysics Data System (ADS)

    Jiang, L. C.; Yue, P.; Lu, X. C.

    2013-10-01

    Provenance, also known as lineage, is important in understanding the derivation history of data products. Geospatial data provenance helps data consumers to evaluate the quality and reliability of geospatial data. In a service-oriented environment, where data are often consumed or produced by distributed services, provenance could be managed by following the same service-oriented paradigm. The Open Geospatial Consortium (OGC) Catalogue Service for the Web (CSW) is used for the registration and query of geospatial data provenance by extending ebXML Registry Information Model (ebRIM). Recent advance of the REpresentational State Transfer (REST) paradigm has shown great promise for the easy integration of distributed resources. RESTful Web Service aims to provide a standard way for Web clients to communicate with servers based on REST principles. The existing approach for provenance catalogue service could be improved by adopting the RESTful design. This paper presents the design and implementation of a catalogue service for geospatial data provenance following RESTful architecture style. A middleware named REST Converter is added on the top of the legacy catalogue service to support a RESTful style interface. The REST Converter is composed of a resource request dispatcher and six resource handlers. A prototype service is developed to demonstrate the applicability of the approach.

  8. Provenance in Data Interoperability for Multi-Sensor Intercomparison

    NASA Astrophysics Data System (ADS)

    Lynnes, C.; Leptoukh, G.; Berrick, S.; Shen, S.; Prados, A.; Fox, P.; Yang, W.; Min, M.; Holloway, D.; Enloe, Y.

    2008-12-01

    As our inventory of Earth science data sets grows, the ability to compare, merge and fuse multiple datasets grows in importance. This implies a need for deeper data interoperability than we have now. Many efforts (e.g. OPeNDAP, Open Geospatial Consortium) have broken down format barriers to interoperability; the next challenge is the semantic aspects of the data. Consider the issues when satellite data are merged, cross- calibrated, validated, inter-compared and fused. We must determine how to match up data sets that are related, yet different in significant ways: the exact nature of the phenomenon being measured, measurement technique, exact location in space-time, or the quality of the measurements. If subtle distinctions between similar measurements are not clear to the user, the results can be meaningless or even lead to an incorrect interpretation of the data. Most of these distinctions trace back to how the data came to be: sensors, processing, and quality assessment. For example, monthly averages of satellite-based aerosol measurements often show significant discrepancies, which might be due to differences in spatio-temporal aggregation, sampling issues, sensor biases, algorithm differences and/or calibration issues. This provenance information must therefore be captured in a semantic framework that allows sophisticated data inter-use tools to incorporate it, and eventually aid in the interpretation of comparison or merged products. Semantic web technology allows us to encode our knowledge of measurement characteristics, phenomena measured, space-time representations, and data quality representation in a well-structured, machine- readable ontology and rulesets. An analysis tool can use this knowledge to show users the provenance- related distinctions between two variables, advising on options for further data processing and analysis. An additional problem for workflows distributed across heterogeneous systems is retrieval and transport of provenance

  9. ISO TC211 standards on Provenance for Earth science

    NASA Astrophysics Data System (ADS)

    Di, L.; Deng, M.

    2014-12-01

    Data provenance, also called lineage, records the derivation history of a data product. The history could include the algorithms used, the process steps taken, the computing environment run, data sources input to the processes, the organization/person responsible for the product, etc. Provenance provides important information to data users for them to determine the usability and reliability of the product. In the science domain, the data provenance is especially important since scientists need to use the information to determine the scientific validity of a data product and to decide if such a product can be used as the basis for further scientific analysis. Provenance is a kind of metadata. In Earth science domain, the International Organization for Standardization (ISO) Technical Committee 211 (ISO TC 211) have set geospatial metadata standards for geospatial data, including ISO 19115:2003-Metadata, ISO 19115-2:2009-Metadata-Part 2: Extensions for imagery and gridded data, and ISO 19115-1:2014 - Metadata -- Part 1: Fundamentals. ISO 19115 and ISO 19115-1 define the fundamental metadata for documenting geospatial data products, and ISO 19115-2 provides additional metadata classes for imagery and gridded data. ISO 19115-1:2014 is the revised version of ISO 19115:2003. ISO 19115 and ISO 19115-1 define fundamental lineage information classes and subclasses. They miss some key information classes needed for documenting the provenance in the Web service environment, such as the running environment, the algorithms, and software executables. However, ISO 19115-2 extends the lineage model in ISO 19115 and provides additional metadata classes needed for documenting provenance information. The combination of lineage models in ISO 19115 and ISO 19115-2 provides a comprehensive provenance information model needed for the web service environment. Currently the ISO Provence standard is not compatible with W3C Prov standard. The revision of ISO 19115-2 will be started in

  10. Provenance Usage in the OceanLink Project

    NASA Astrophysics Data System (ADS)

    Narock, T.; Arko, R. A.; Carbotte, S. M.; Chandler, C. L.; Cheatham, M.; Fils, D.; Finin, T.; Hitzler, P.; Janowicz, K.; Jones, M.; Krisnadhi, A.; Lehnert, K. A.; Mickle, A.; Raymond, L. M.; Schildhauer, M.; Shepherd, A.; Wiebe, P. H.

    2014-12-01

    A wide spectrum of maturing methods and tools, collectively characterized as the Semantic Web, is helping to vastly improve thedissemination of scientific research. The OceanLink project, an NSF EarthCube Building Block, is utilizing semantic technologies tointegrate geoscience data repositories, library holdings, conference abstracts, and funded research awards. Provenance is a vital componentin meeting both the scientific and engineering requirements of OceanLink. Provenance plays a key role in justification and understanding when presenting users with results aggregated from multiple sources. In the engineering sense, provenance enables the identification of new data and the ability to determine which data sources to query. Additionally, OceanLink will leverage human and machine computation for crowdsourcing, text mining, and co-reference resolution. The results of these computations, and their associated provenance, will be folded back into the constituent systems to continually enhance precision and utility. We will touch on the various roles provenance is playing in OceanLink as well as present our use of the PROV Ontology and associated Ontology Design Patterns.

  11. Linked data and provenance in biological data webs.

    PubMed

    Zhao, Jun; Miles, Alistair; Klyne, Graham; Shotton, David

    2009-03-01

    The Web is now being used as a platform for publishing and linking life science data. The Web's linking architecture can be exploited to join heterogeneous data from multiple sources. However, as data are frequently being updated in a decentralized environment, provenance information becomes critical to providing reliable and trustworthy services to scientists. This article presents design patterns for representing and querying provenance information relating to mapping links between heterogeneous data from sources in the domain of functional genomics. We illustrate the use of named resource description framework (RDF) graphs at different levels of granularity to make provenance assertions about linked data, and demonstrate that these assertions are sufficient to support requirements including data currency, integrity, evidential support and historical queries.

  12. PIXE study on the provenance of Chinese ancient porcelain

    NASA Astrophysics Data System (ADS)

    Zhu, D.; Cheng, H. S.; Lin, J. W.; Yang, F. J.

    2006-08-01

    This paper reports the PIXE study on the provenance of Chinese ancient porcelain made in 7-10th century. The chemical compositions of Jun celadon samples made at Juntai, Linru and Hunyuan kilns, the white-glazed porcelain samples made at Ding, Huangye and Dangyangyu kilns, and the Ru celadon samples made at Qiangliang Temple were measured by external-beam PIXE, and the factor analysis was applied for identifying their provenances. Experimental results show that the porcelain products made at different kilns can be distinguished according to the compositional differences measured by PIXE.

  13. Provenance in Data Interoperability for Multi-Sensor Intercomparison

    NASA Technical Reports Server (NTRS)

    Lynnes, Chris; Leptoukh, Greg; Berrick, Steve; Shen, Suhung; Prados, Ana; Fox, Peter; Yang, Wenli; Min, Min; Holloway, Dan; Enloe, Yonsook

    2008-01-01

    As our inventory of Earth science data sets grows, the ability to compare, merge and fuse multiple datasets grows in importance. This requires a deeper data interoperability than we have now. Efforts such as Open Geospatial Consortium and OPeNDAP (Open-source Project for a Network Data Access Protocol) have broken down format barriers to interoperability; the next challenge is the semantic aspects of the data. Consider the issues when satellite data are merged, cross-calibrated, validated, inter-compared and fused. We must match up data sets that are related, yet different in significant ways: the phenomenon being measured, measurement technique, location in space-time or quality of the measurements. If subtle distinctions between similar measurements are not clear to the user, results can be meaningless or lead to an incorrect interpretation of the data. Most of these distinctions trace to how the data came to be: sensors, processing and quality assessment. For example, monthly averages of satellite-based aerosol measurements often show significant discrepancies, which might be due to differences in spatio- temporal aggregation, sampling issues, sensor biases, algorithm differences or calibration issues. Provenance information must be captured in a semantic framework that allows data inter-use tools to incorporate it and aid in the intervention of comparison or merged products. Semantic web technology allows us to encode our knowledge of measurement characteristics, phenomena measured, space-time representation, and data quality attributes in a well-structured, machine-readable ontology and rulesets. An analysis tool can use this knowledge to show users the provenance-related distrintions between two variables, advising on options for further data processing and analysis. An additional problem for workflows distributed across heterogeneous systems is retrieval and transport of provenance. Provenance may be either embedded within the data payload, or transmitted

  14. Scab susceptibility of a provenance collection of pecan

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Scab (caused by Fusicladium effusum) is the most economically destructive disease of pecan in the Southeast US. Epidemics are favored by rainfall and high humidity. A provenance collection of ~950 pecan trees from 19 locations representing the native range of the species is located in Byron, Georgia...

  15. A Discussion of Can Reaction Mechanisms Be Proven?

    NASA Astrophysics Data System (ADS)

    Yoon, Tehshik

    2009-05-01

    This review responds to the Commentary article " Can Reaction Mechanisms Be Proven? " and continues the discussion engendered by that piece. JCE will provide an online forum for further discussion of the issue. We hope that both faculty and students will contribute their opinions and ideas to this discussion. See Other Reviewer Comments: Brown Lewis Wade

  16. A Discussion of Can Reaction Mechanisms Be Proven?

    NASA Astrophysics Data System (ADS)

    Brown, Theodore L.

    2009-05-01

    This review responds to the Commentary article " Can Reaction Mechanisms Be Proven? " and continues the discussion engendered by that piece. JCE will provide an online forum for further discussion of the issue. We hope that both faculty and students will contribute their opinions and ideas to this discussion. See Other Reviewer Comments: Lewis Yoon Wade

  17. A Discussion of Can Reaction Mechanisms Be Proven?

    NASA Astrophysics Data System (ADS)

    Lewis, David E.

    2009-05-01

    This review responds to the Commentary article " Can Reaction Mechanisms Be Proven? " and continues the discussion engendered by that piece. JCE will provide an online forum for further discussion of the issue. We hope that both faculty and students will contribute their opinions and ideas to this discussion. See Other Reviewer Comments: Brown Yoon Wade

  18. An extensible framework for provenance in human terrain visual analytics.

    PubMed

    Walker, Rick; Slingsby, Aiden; Dykes, Jason; Xu, Kai; Wood, Jo; Nguyen, Phong H; Stephens, Derek; Wong, B L William; Zheng, Yongjun

    2013-12-01

    We describe and demonstrate an extensible framework that supports data exploration and provenance in the context of Human Terrain Analysis (HTA). Working closely with defence analysts we extract requirements and a list of features that characterise data analysed at the end of the HTA chain. From these, we select an appropriate non-classified data source with analogous features, and model it as a set of facets. We develop ProveML, an XML-based extension of the Open Provenance Model, using these facets and augment it with the structures necessary to record the provenance of data, analytical process and interpretations. Through an iterative process, we develop and refine a prototype system for Human Terrain Visual Analytics (HTVA), and demonstrate means of storing, browsing and recalling analytical provenance and process through analytic bookmarks in ProveML. We show how these bookmarks can be combined to form narratives that link back to the live data. Throughout the process, we demonstrate that through structured workshops, rapid prototyping and structured communication with intelligence analysts we are able to establish requirements, and design schema, techniques and tools that meet the requirements of the intelligence community. We use the needs and reactions of defence analysts in defining and steering the methods to validate the framework.

  19. Representing annotation compositionality and provenance for the Semantic Web

    PubMed Central

    2013-01-01

    Background Though the annotation of digital artifacts with metadata has a long history, the bulk of that work focuses on the association of single terms or concepts to single targets. As annotation efforts expand to capture more complex information, annotations will need to be able to refer to knowledge structures formally defined in terms of more atomic knowledge structures. Existing provenance efforts in the Semantic Web domain primarily focus on tracking provenance at the level of whole triples and do not provide enough detail to track how individual triple elements of annotations were derived from triple elements of other annotations. Results We present a task- and domain-independent ontological model for capturing annotations and their linkage to their denoted knowledge representations, which can be singular concepts or more complex sets of assertions. We have implemented this model as an extension of the Information Artifact Ontology in OWL and made it freely available, and we show how it can be integrated with several prominent annotation and provenance models. We present several application areas for the model, ranging from linguistic annotation of text to the annotation of disease-associations in genome sequences. Conclusions With this model, progressively more complex annotations can be composed from other annotations, and the provenance of compositional annotations can be represented at the annotation level or at the level of individual elements of the RDF triples composing the annotations. This in turn allows for progressively richer annotations to be constructed from previous annotation efforts, the precise provenance recording of which facilitates evidence-based inference and error tracking. PMID:24268021

  20. Provenance for Runtime Workflow Steering and Validation in Computational Seismology

    NASA Astrophysics Data System (ADS)

    Spinuso, A.; Krischer, L.; Krause, A.; Filgueira, R.; Magnoni, F.; Muraleedharan, V.; David, M.

    2014-12-01

    Provenance systems may be offered by modern workflow engines to collect metadata about the data transformations at runtime. If combined with effective visualisation and monitoring interfaces, these provenance recordings can speed up the validation process of an experiment, suggesting interactive or automated interventions with immediate effects on the lifecycle of a workflow run. For instance, in the field of computational seismology, if we consider research applications performing long lasting cross correlation analysis and high resolution simulations, the immediate notification of logical errors and the rapid access to intermediate results, can produce reactions which foster a more efficient progress of the research. These applications are often executed in secured and sophisticated HPC and HTC infrastructures, highlighting the need for a comprehensive framework that facilitates the extraction of fine grained provenance and the development of provenance aware components, leveraging the scalability characteristics of the adopted workflow engines, whose enactment can be mapped to different technologies (MPI, Storm clusters, etc). This work looks at the adoption of W3C-PROV concepts and data model within a user driven processing and validation framework for seismic data, supporting also computational and data management steering. Validation needs to balance automation with user intervention, considering the scientist as part of the archiving process. Therefore, the provenance data is enriched with community-specific metadata vocabularies and control messages, making an experiment reproducible and its description consistent with the community understandings. Moreover, it can contain user defined terms and annotations. The current implementation of the system is supported by the EU-Funded VERCE (http://verce.eu). It provides, as well as the provenance generation mechanisms, a prototypal browser-based user interface and a web API built on top of a NoSQL storage

  1. Sensor Data Management, Validation, Correction, and Provenance for Building Technologies

    SciTech Connect

    Castello, Charles C; Sanyal, Jibonananda; Rossiter, Jeffrey S; Hensley, Zachary; New, Joshua Ryan

    2014-01-01

    Oak Ridge National Laboratory (ORNL) conducts research on technologies that use a wide range of sensors to develop and characterize building energy performance. The management of high-resolution sensor data, analysis, and tracing lineage of such activities is challenging. Missing or corrupt data due to sensor failure, fouling, drifting, calibration error, or data logger failure is another issue. This paper focuses on sensor data management, validation, correction, and provenance to combat these issues, ensuring complete and accurate sensor datasets for building technologies applications and research. The design and development of two integrated software products are discussed: Sensor Data Validation and Correction (SensorDVC) and the Provenance Data Management System (ProvDMS) platform.

  2. Implementing Provenance Collection in a Legacy Data Product Generation System

    NASA Astrophysics Data System (ADS)

    Conover, H.; Ramachandran, R.; Kulkarni, A.; Beaumont, B.; McEniry, M.; Graves, S. J.; Goodman, H.

    2012-12-01

    NASA has been collecting, storing, archiving and distributing vast amounts of Earth science data derived from satellite observations for several decades now. The raw data collected from the different sensors undergoes many different transformations before it is distributed to the science community as climate-research-quality data products. These data transformations include calibration, geolocation, and conversion of the instrument counts into meaningful geophysical parameters, and may include reprojection and/or spatial and temporal averaging as well. In the case of many Earth science data systems, the science algorithms and any ancillary data files used for these transformations are delivered as a "black box" to be integrated into the data system's processing framework. In contrast to an experimental workflow that may vary with each iteration, such systems use consistent, well-engineered processes to apply the same science algorithm to each well-defined set of inputs in order to create standard data products. Even so, variability is inevitably introduced. There may be changes made to the algorithms, different ancillary datasets may be used, underlying hardware and software may get upgraded, etc. Furthermore, late-arriving input data, operator error, or other processing anomalies may necessitate regeneration and replacement of a particular set of data files and any downstream products. These variations need to be captured, documented and made accessible to the scientific community so they can be properly accounted for in analyses. This presentation describes an approach to provenance capture, storage and dissemination implemented at the NASA Science Investigator-led Processing System (SIPS) for the AMSR-E (Advanced Microwave Scanning Radiometer - Earth Observing System) instrument. Key considerations in adding provenance capabilities to this legacy data system include: (1) granularity of provenance information captured, (2) additional context information needed

  3. Provenance Tracking for Earth Science Data and Its Metadata Representation

    NASA Astrophysics Data System (ADS)

    Barkstrom, B. R.

    2007-12-01

    In many cases Earth science data production involves long and complex chains of processes that accept files as input and create new files. It can be demonstrated that these chains form a mathematical graph in which the files and processes are the vertices and the relations between the files and vertices form the edges. There are four types of edges, which can be represented by the relations "this file was produced by that process," "this file is used by those processes," "this process needs these files for input," and "this process produces those files as output." Because Earth science data production often involves using previous data for statistical quality control, provenance graphs can be very large. For example, if previous data are used to develop statistics of clear sky radiances, a particular file may depend on statistics collected on many months of data. For EOS data or for the upcoming NPP and NPOESS missions, the number of files being ingested per day can be in the range of 10,000 to 100,000. As a result, the number of vertices and links can easily be in the millions to hundreds of millions of objects. This suggests that routine inclusion of complete provenance graphs in single files may be prohibitively voluminous, although the increasingly stringent requirements for provenance tracking require maintenance of the information from which the graph can be reliably constructed. The fact that provenance tracking requires traversal of the vertices and edges of the graph makes it difficult to uniquely fit into eXtensible Markup Language (XML). It also makes the construction of the graph difficult to do in standard Structured Query Language (SQL) because the tables for representing the graph require recursive queries. Both of these difficulties require care in constructing the data structures and the software that stores and makes the metadata accessible. This paper will then discuss the representation of this structure in metadata, including the possibilities

  4. Provenance of sandstones in the Golconda terrane, north central Nevada

    SciTech Connect

    Jones, E.A. )

    1991-02-01

    The upper Paleozoic Golconda terrane of north-central Nevada is a composite of several structurally bounded subterranes made of clastic, volcanic, and carbonate rocks. The clastic rocks provide important clues for the interpretation of the provenance and paleogeographic settings of the different lithologic assemblages found in these subterranes. Two petrographically distinct sandstones are identified in the Golconda terrane in the Osgood Mountains and the Hot springs Range of north-central Nevada. The sandstone of the Mississippian Farrel Canyon Formation, part of the Dry Hills subterrane, is characterized by quartzose and sedimentary and lithic-rich clasts with a small feldspar component. in contrast, the sandstone of the Permian Poverty Peak (II) subterrane is a silty quartzarenite with no lithic component, and a very limited feldspar component. The sandstone of the Farrel Canyon Formation is similar to nonvolcanic sandstones reported from elsewhere in the Golconda terrane. Modal data reflect a provenance of a recycled orogen and permit the interpretation that it could have been derived from the antler orogen as has been proposed for other sandstones of the golconda terrane. The sandstone of the Poverty Peak (II) subterrane is more mature than any of the other sandstones in either the Golconda terrane, the Antler overlap sequence, or the Antler foreland basin sequence. Modal data put the Poverty Peak (II) sandstone in the continental block provenance category. The distinct extrabasinal provenances represented in these different sandstones support the idea that the Golconda basin was made up of complex paleogeographic settings, which included multiple sources of extrabasinal sediment.

  5. Examining the Prospective Scuba Diver: Which Exclusions are Proven?

    PubMed

    Beauprie, I

    1989-08-01

    Who can safely dive? All prospective divers in Canada must have a physician's approval to start training. Many review articles and typical check-list medical forms, however, imply exclusions that are not well proven. The author critically analyzes current diving and diving accident statistics and discusses the physiology of risk. He also discusses diving morbidity and mortality from pressure changes, illness caused by immersion only, hypothermia, and diving during pregnancy.

  6. Examining the Prospective Scuba Diver: Which Exclusions are Proven?

    PubMed Central

    Beauprie, Ian

    1989-01-01

    Who can safely dive? All prospective divers in Canada must have a physician's approval to start training. Many review articles and typical check-list medical forms, however, imply exclusions that are not well proven. The author critically analyzes current diving and diving accident statistics and discusses the physiology of risk. He also discusses diving morbidity and mortality from pressure changes, illness caused by immersion only, hypothermia, and diving during pregnancy. PMID:21248872

  7. Contrast-enhanced ultrasound of histologically proven hepatic epithelioid hemangioendothelioma

    PubMed Central

    Dong, Yi; Wang, Wen-Ping; Cantisani, Vito; D’Onofrio, Mirko; Ignee, Andre; Mulazzani, Lorenzo; Saftoiu, Adrian; Sparchez, Zeno; Sporea, Ioan; Dietrich, Christoph F

    2016-01-01

    AIM: To analyze contrast-enhanced ultrasound (CEUS) features of histologically proven hepatic epithelioid hemangioendothelioma (HEHE) in comparison to other multilocular benign focal liver lesions (FLL). METHODS: Twenty-five patients with histologically proven HEHE and 45 patients with histologically proven multilocular benign FLL were retrospectively reviewed. Four radiologists assessed the CEUS enhancement pattern in consensus. RESULTS: HEHE manifested as a single (n = 3) or multinodular (n = 22) FLL. On CEUS, HEHE showed rim-like (18/25, 72%) or heterogeneous hyperenhancement (7/25, 28%) in the arterial phase and hypoenhancement (25/25, 100%) in the portal venous and late phases (PVLP), a sign of malignancy. Eighteen patients showed central unenhanced areas (18/25, 72%); in seven patients (7/25, 28%), more lesions were detected in the PVLP. In contrast, all patients with hemangioma and focal nodular hyperplasia showed hyperenhancement as the most distinctive feature (P < 0.01). CONCLUSION: CEUS allows for characterization of unequivocal FLL. By analyzing the hypoenhancement in the PVLP, CEUS can determine the malignant nature of HEHE. PMID:27217705

  8. Quantifying the provenance of aeolian sediments using multiple composite fingerprints

    NASA Astrophysics Data System (ADS)

    Liu, Benli; Niu, Qinghe; Qu, Jianjun; Zu, Ruiping

    2016-09-01

    We introduce a new fingerprinting method that uses multiple composite fingerprints for studies of aeolian sediment provenance. We used this method to quantify the provenance of sediments on both sides of the Qinghai-Tibetan Railway (QTR) in the Cuona Lake section of the Tibetan Plateau (TP), in an environment characterized by aeolian and fluvial interactions. The method involves repeatedly solving a linear mixing model based on mass conservation; the model is not limited to spatial scale or transport types and uses all the tracer groups that passed the range check, Kruskal-Wallis H-test, and a strict analytical solution screening. The proportional estimates that result from using different composite fingerprints are highly variable; however, the average of these fingerprints has a greater accuracy and certainty than any single fingerprint. The results show that sand from the lake beach, hilly surface, and gullies contribute, respectively, 48%, 31% and 21% to the western railway sediments and 43%, 33% and 24% to the eastern railway sediments. The difference between contributions from various sources on either side of the railway, which may increase in the future, was clearly related to variations in local transport characteristics, a conclusion that is supported by grain size analysis. The construction of the QTR changed the local cycling of materials, and the difference in provenance between the sediments that are separated by the railway reflects the changed sedimentary conditions on either side of the railway. The effectiveness of this method suggests that it will be useful in other studies of aeolian sediments.

  9. Provenance Representation in the Global Change Information System (GCIS)

    NASA Technical Reports Server (NTRS)

    Tilmes, Curt

    2012-01-01

    Global climate change is a topic that has become very controversial despite strong support within the scientific community. It is common for agencies releasing information about climate change to be served with Freedom of Information Act (FOIA) requests for everything that led to that conclusion. Capturing and presenting the provenance, linking to the research papers, data sets, models, analyses, observation instruments and satellites, etc. supporting key findings has the potential to mitigate skepticism in this domain. The U.S. Global Change Research Program (USGCRP) is now coordinating the production of a National Climate Assessment (NCA) that presents our best understanding of global change. We are now developing a Global Change Information System (GCIS) that will present the content of that report and its provenance, including the scientific support for the findings of the assessment. We are using an approach that will present this information both through a human accessible web site as well as a machine readable interface for automated mining of the provenance graph. We plan to use the developing W3C PROV Data Model and Ontology for this system.

  10. Rate of occult specimen provenance complications in routine clinical practice.

    PubMed

    Pfeifer, John D; Liu, Jingxia

    2013-01-01

    Occult specimen provenance complications (SPCs), which occur when there is an absence of any direct or indirect indication that a specimen switch or contamination may have occurred, constitute a significant patient safety and medical-legal problem because they can lead to misdiagnosis. However, the rate at which occult SPCs occur is unknown because, by definition, this category of errors is not identified by standard laboratory practices. In this study, we evaluated a data set comprising almost 13,000 prostate biopsies that were prospectively tested for specimen provenance errors as part of routine clinical practice. The frequency of occult type 1 errors (a complete transposition between patients) and type 2 errors (contamination of the patient's tissue with 1 or more unrelated patients) was 0.26% and 0.67%, respectively; every urology practice setting and surgical pathology laboratory type with a representative sample size experienced at least 1 type 1 and 1 type 2 error during the study period. Overall, the mean frequency of SPCs across practice settings was 0.22% for type 1 errors and 1.69% for type 2 errors. The type 1 rate showed no correlation with a surgical pathology laboratory setting or urologic practice group setting; the type 2 rate correlated solely with a surgical pathology laboratory setting. The occult SPC rate in this limited data set provides an estimate of the scope of the problem of potential misdiagnosis as a result of occult specimen provenance errors in routine clinical practice.

  11. A Provenance Model for Real-Time Water Information Systems

    NASA Astrophysics Data System (ADS)

    Liu, Q.; Bai, Q.; Zednik, S.; Taylor, P.; Fox, P. A.; Taylor, K.; Kloppers, C.; Peters, C.; Terhorst, A.; West, P.; Compton, M.; Shu, Y.; Provenance Management Team

    2010-12-01

    Generating hydrological data products, such as flow forecasts, involves complex interactions among instruments, data simulation models, computational facilities and data providers. Correct interpretation of the data produced at various stages requires good understanding of how data was generated or processed. Provenance describes the lineage of a data product. Making provenance information accessible to hydrologists and decision makers not only helps to determine the data’s value, accuracy and authorship, but also enables users to determine the trustworthiness of the data product. In the water domain, WaterML2 [1] is an emerging standard which describes an information model and format for the publication of water observations data in XML. The W3C semantic sensor network incubator group (SSN-XG) [3] is producing ontologies for the description of sensor configurations. By integrating domain knowledge of this kind into the provenance information model, the integrated information model will enable water domain researchers and water resource managers to better analyse how observations and derived data products were generated. We first introduce the Proof Mark Language (PML2) [2], WaterML2 and the SSN-XG sensor ontology as the proposed provenance representation formalism. Then we describe some initial implementations how these standards could be integrated to represent the lineage of water information products. Finally we will highlight how the provenance model for a distributed real-time water information system assists the interpretation of the data product and establishing trust. Reference [1] Taylor, P., Walker, G., Valentine, D., Cox, Simon: WaterML2.0: Harmonising standards for water observation data. Geophysical Research Abstracts. Vol. 12. [2] da Silva, P.P., McGuinness, D.L., Fikes, R.: A proof markup language for semantic web services. Inf. Syst. 31(4) (2006), 381-395. [3] W3C Semantic Sensor Network Incubator Group http://www.w3.org/2005/Incubator

  12. Provenance-Enabled Integration of Sensor Network Data

    NASA Astrophysics Data System (ADS)

    Pinheiro da Silva, P.; McGuinness, D. L.

    2014-12-01

    Ontology design in support of sensor networks requires deep scientific and technical knowledge. For instance, sensor network ontologies may define concepts rich enough to describe the selection of sensor locations that are driven by both scientific use cases, such as proximity to a physical entity, and technical requirements, such as wireless coverage. Our work in collaboration with IBM and the FUND for Lake George is set within the context of the Jefferson Project that aims to monitor, analyze, and understand observation and simulation data in support of decision making concerning the ecosystem of Lake George, NY. We have designed a Human-Aware Sensor Network Ontology (HASNet-O) that we believe is broadly reusable. We will highlight its contributions, describe its relationships to well used ontologies, and demonstrate it in action in the Jefferson Project. The ontology leverages best in class foundational ontologies including OBOE, VSTO, and PROV. One of the reasons HASNet-O is reusable is because it uses a provenance perspective to generalize what initially looked like sensor-specific terms that can be more accurately viewed as provenance terms. For example, we observe that the Activity concept from the PROV language, a W3C provenance standard, can be used to explain complete sensor lifecycles by describing how a network operates including how human interventions may interfere with the quality of the sensor network data, even for highly automated networks. We further observe that Observation activities, which are at the core of most sensor network ontologies, are not described in terms of deployments. In fact, Deployment activities are rarely documented in sensor data/metadata although Observation instances can only occur during the lifetime of Deployment instances. Our analysis of network ontologies in light of provenance knowledge includes a discussion about relationships. For instance, relationships between sensors and data are well-established provenance

  13. Making Sense of 'Big Data' in Provenance Studies

    NASA Astrophysics Data System (ADS)

    Vermeesch, P.

    2014-12-01

    Huge online databases can be 'mined' to reveal previously hidden trends and relationships in society. One could argue that sedimentary geology has entered a similar era of 'Big Data', as modern provenance studies routinely apply multiple proxies to dozens of samples. Just like the Internet, sedimentary geology now requires specialised statistical tools to interpret such large datasets. These can be organised on three levels of progressively higher order:A single sample: The most effective way to reveal the provenance information contained in a representative sample of detrital zircon U-Pb ages are probability density estimators such as histograms and kernel density estimates. The widely popular 'probability density plots' implemented in IsoPlot and AgeDisplay compound analytical uncertainty with geological scatter and are therefore invalid.Several samples: Multi-panel diagrams comprising many detrital age distributions or compositional pie charts quickly become unwieldy and uninterpretable. For example, if there are N samples in a study, then the number of pairwise comparisons between samples increases quadratically as N(N-1)/2. This is simply too much information for the human eye to process. To solve this problem, it is necessary to (a) express the 'distance' between two samples as a simple scalar and (b) combine all N(N-1)/2 such values in a single two-dimensional 'map', grouping similar and pulling apart dissimilar samples. This can be easily achieved using simple statistics-based dissimilarity measures and a standard statistical method called Multidimensional Scaling (MDS).Several methods: Suppose that we use four provenance proxies: bulk petrography, chemistry, heavy minerals and detrital geochronology. This will result in four MDS maps, each of which likely show slightly different trends and patterns. To deal with such cases, it may be useful to use a related technique called 'three way multidimensional scaling'. This results in two graphical outputs: an MDS

  14. Dust input to the South Atlantic: provenance and paleoclimatic implications

    NASA Astrophysics Data System (ADS)

    Recasens, Cristina; Goldstein, Steven L.; Winckler, Gisela; Kaplan, Michael R.; Anderson, Robert F.; Cai, Yue; Bolge, Louise L.

    2015-04-01

    Wind-blown dust can be used to trace past and present atmospheric circulation patterns, through the study of its geographical provenance, its spatial distribution and temporal variability. Antarctic and marine records indicate that Patagonia has been a principal source of dust for the southern latitudes, particularly during glacial times. To improve our understanding of dust provenance and transport mechanisms downstream from South America and part-way to Antarctica, we analyzed an extensive set of samples from the 12.76-m piston core TN057-6, located at 3751 m water depth on the Agulhas Ridge in the Southeast Atlantic, north of the present-day position of the Subantarctic Front and South of the Subtropical Convergence Zone. From the core's location downwind from South America and its depth above the abyssal plain the major source of terrigenous sediment is wind-blown dust material originating in South America, and temporal changes in the dust composition can be used to trace changes in the dust source regions. To fingerprint better the terrigenous detritus, we measured the chemical compositions and Sr-Nd-Pb-He-Th isotope ratios in the fine (<5 μm) fraction terrigenous material, in samples ranging in age from MIS 6 to present-day. Additionally we analyzed fine fraction material from potential dust source areas in different locations around Patagonia to refine their individual geochemical signatures, improve knowledge of spatial variability, and compare them to the Southern Ocean samples. Our results show that the glacial and interglacial samples have different provenances. While the glacial dust compositions are consistent with purely Patagonian sources, the material deposited during interglacial periods presents more radiogenic Sr and Pb values and more negative ɛNd suggesting the contribution of a different lithogenic source, with possible mixing with the Patagonian sources.

  15. Indus Basin sediment provenance constrained using garnet geochemistry

    NASA Astrophysics Data System (ADS)

    Alizai, Anwar; Clift, Peter D.; Still, John

    2016-08-01

    The chemical and mineralogical diversity of western Himalayan rivers is the result of each of them draining different tectonic and lithologic units, whose character is partly transferred to the sediments carried by those rivers. Garnet geochemistry was employed to discriminate provenance in the Indus River system. We characterized the geochemistry of garnet sediment grains from the modern Indus and all its major tributaries, as well as the related but ephemeral Ghaggar-Hakra River and dune sand from the Thar Desert. Garnet geochemistry displays a unique signature for the Himalayan rivers on the east of the Indus drainage compared to those in the western drainage. The trunk Indus remains distinct because of the dominant arc-type pyrope-garnet derived from Kohistan and the Karakoram. The Jhellum, which lies just east of the modern Indus has modest concentrations of arc-type pyrope garnets, which are more depleted in the other eastern tributaries. Their presence in the Jhellum reflects recycling of trunk Indus garnets through the Miocene Siwalik Group foreland sedimentary rocks. The Thar Desert dune sample contains significant numbers of grains similar to those in the trunk Indus, likely reworked by monsoon winds from the SW. Our data further indicate the presence of a Himalayan river channel east of the present Indus, close to the delta, in the Nara River valley during the middle Holocene. Sands from this channel cannot be distinguished from the Indus on the basis of their garnet geochemistry alone but we favour their sedimentation from an Indus channel rather than reworking of desert sands by another stream. The garnet geochemistry shows some potential as a provenance tool, but cannot be used alone to uniquely discriminate Indus Basin provenance.

  16. Provenance-Powered Automatic Workflow Generation and Composition

    NASA Astrophysics Data System (ADS)

    Zhang, J.; Lee, S.; Pan, L.; Lee, T. J.

    2015-12-01

    In recent years, scientists have learned how to codify tools into reusable software modules that can be chained into multi-step executable workflows. Existing scientific workflow tools, created by computer scientists, require domain scientists to meticulously design their multi-step experiments before analyzing data. However, this is oftentimes contradictory to a domain scientist's daily routine of conducting research and exploration. We hope to resolve this dispute. Imagine this: An Earth scientist starts her day applying NASA Jet Propulsion Laboratory (JPL) published climate data processing algorithms over ARGO deep ocean temperature and AMSRE sea surface temperature datasets. Throughout the day, she tunes the algorithm parameters to study various aspects of the data. Suddenly, she notices some interesting results. She then turns to a computer scientist and asks, "can you reproduce my results?" By tracking and reverse engineering her activities, the computer scientist creates a workflow. The Earth scientist can now rerun the workflow to validate her findings, modify the workflow to discover further variations, or publish the workflow to share the knowledge. In this way, we aim to revolutionize computer-supported Earth science. We have developed a prototyping system to realize the aforementioned vision, in the context of service-oriented science. We have studied how Earth scientists conduct service-oriented data analytics research in their daily work, developed a provenance model to record their activities, and developed a technology to automatically generate workflow starting from user behavior and adaptability and reuse of these workflows for replicating/improving scientific studies. A data-centric repository infrastructure is established to catch richer provenance to further facilitate collaboration in the science community. We have also established a Petri nets-based verification instrument for provenance-based automatic workflow generation and recommendation.

  17. Histologically Proven, Low-grade Brainstem Gliomas in Children

    PubMed Central

    Ahmed, Kamran A.; Laack, Nadia N.; Eckel, Laurence J.; Orme, Nicholas M.; Wetjen, Nicholas M.

    2015-01-01

    Introduction To evaluate long-term overall survival (OS), progression- free survival (PFS), and outcomes in pathologically proven brainstem low-grade gliomas (BS-LGG) in children. Methods The Mayo Clinic tumor registry identified 48 consecutive children (≤20 y, 52% female) with biopsy-proven BS-LGG treated at Mayo Clinic between January 1971 and December 2004. Medical records were retrospectively reviewed. For analysis, patients were censored at the time of recurrence, death, or last follow-up. Results The median age at diagnosis was 12 years with a median follow-up of 6.0 years. The majority of tumors were grade I (69%) and pathology was consistent with an astrocytoma in the majority of patients (98%). Gross total resection was obtained in 4, subtotal in 17, and 27 patients were biopsied only. Postoperative radiotherapy (RT) was used in 29 patients. Median OS for the entire group was 14.8 years with a 1-, 5-, and 10-year OS of 85%, 67% and 59%, respectively. Median PFS for the entire group was 7.3 years. Improved survival was associated with undergoing resection versus biopsy-only with 5-year OS rates of 85% and 50% (P = 0.002), respectively. A high proportion of patients (42%) had diffuse tumors and 13 patients (27%) had diffuse pontine gliomas (DPGs). DPGs had an OS of 1.8 years with a worse median PFS than non-DPGs (1.8 vs. 11.1 y; P = 0.009). RT was used preferentially in patients with poor prognosis such as those who had a biopsy-only procedure (19/27) and DPGs (9/13). Conclusions OS in this single institution retrospective study in pathologically proven BS-LGG with extensive follow-up displayed favorable long-term outcomes. Improved outcomes were associated with nondiffuse classification. PMID:23357966

  18. From static to dynamic provenance analysis-Sedimentary petrology upgraded

    NASA Astrophysics Data System (ADS)

    Garzanti, Eduardo

    2016-05-01

    The classical approach to sandstone petrology, established in the golden years of plate tectonics and based on the axiom that "detrital modes of sandstone suites primarily reflect the different tectonic settings of provenance terranes," has represented a benchmark for decades. The composition of sand and sandstone, however, simply provides us with a distorted image of the lithological structure of source terranes and gives us little clue whether they are allochthonous or autochthonous, orogenic or anorogenic, young or old. What we may able to see reflected in detrital modes is the nature of source terranes (continental, arc, oceanic) and the tectonostratigraphic level reached by erosion in space and time. The proposed new approach to the petrology of sand and sandstone (1) starts with a simple classification scheme circulated since the 1960s, which is purely descriptive, objective, and free of ill-defined ambiguous terms and (2) focuses on the nature and tectonostratigraphic level of source terranes. Further steps are essential to upgrade provenance analysis. Acquiring knowledge from modern settings is needed to properly identify and wherever possible correct for physical and chemical processes introducing environmental and diagenetic bias and thus address nature's complexities with adequate conceptual tools. Equally important is the integration of multiple techniques, ideally including bulk-sediment, multi-mineral, and single-mineral methods. Bulk-sediment petrography remains the fundamental approach that allows us to capture the most precious source of direct provenance information, represented by the mineralogy and texture of rock fragments. Bulk-sediment geochemistry, applicable also to silt and clay carried in suspension, is a superior method to check for hydraulic sorting, chemical weathering, and fertility of detrital minerals in different sediment sources. Detrital geochronology, thermochronology, and isotope geochemistry reveal the diverse time structures

  19. Capturing, Harmonizing and Delivering Data and Quality Provenance

    NASA Technical Reports Server (NTRS)

    Leptoukh, Gregory; Lynnes, Christopher

    2011-01-01

    Satellite remote sensing data have proven to be vital for various scientific and applications needs. However, the usability of these data depends not only on the data values but also on the ability of data users to assess and understand the quality of these data for various applications and for comparison or inter-usage of data from different sensors and models. In this paper, we describe some aspects of capturing, harmonizing and delivering this information to users in the framework of distributed web-based data tools.

  20. Preventing aggressive prostate cancer with proven cardiovascular disease preventive methods

    PubMed Central

    Moyad, Mark A

    2015-01-01

    Cardiovascular disease (CVD) has been the number one cause of death in the U.S. for 114 of the last 115 years. Risk factors for prostate cancer have primarily mirrored risk proven risk factors for CVD, especially aggressive disease. Obesity, dyslipidemia, glucose intolerance, metabolic syndrome, unhealthy dietary habits or caloric excess, lack of physical activity, and inflammation are just some of these shared risk factors. The evidence also suggests proven CVD preventive measures are identical to prostate cancer preventive measures, especially in regard to aggressive disease. Thus, apart from lifestyle measures that can encourage optimal heart and prostate health there are potentially several dietary supplements that need to be avoided in healthy men because they may also increase the risk of prostate cancer. However, there are also several low-cost, generic, safe in the appropriate individuals, and naturally derived agents that could reduce prostate cancer risk, and these can be discussed and remembered utilizing the acronym S.A.M. (statins, aspirin, and/or metformin). PMID:26112486

  1. Preventing aggressive prostate cancer with proven cardiovascular disease preventive methods.

    PubMed

    Moyad, Mark A

    2015-01-01

    Cardiovascular disease (CVD) has been the number one cause of death in the U.S. for 114 of the last 115 years. Risk factors for prostate cancer have primarily mirrored risk proven risk factors for CVD, especially aggressive disease. Obesity, dyslipidemia, glucose intolerance, metabolic syndrome, unhealthy dietary habits or caloric excess, lack of physical activity, and inflammation are just some of these shared risk factors. The evidence also suggests proven CVD preventive measures are identical to prostate cancer preventive measures, especially in regard to aggressive disease. Thus, apart from lifestyle measures that can encourage optimal heart and prostate health there are potentially several dietary supplements that need to be avoided in healthy men because they may also increase the risk of prostate cancer. However, there are also several low-cost, generic, safe in the appropriate individuals, and naturally derived agents that could reduce prostate cancer risk, and these can be discussed and remembered utilizing the acronym S.A.M. (statins, aspirin, and/or metformin).

  2. Testing palaeotectonic models for the Internal Hellenides with sediment provenance

    NASA Astrophysics Data System (ADS)

    Meinhold, G.

    2009-04-01

    The Internal Hellenides of Greece are a result of the Alpine-Himalayan orogen. The relationships between different pre-Alpine crustal fragments of the Internal Hellenides are now masked by younger (Mesozoic to Cenozoic) complex structural and metamorphic events. This, together with the scarcity of biostratigraphic, geochronological and palaeomagnetic data, has given rise to equivocal palaeotectonic models and interpretations. However, the age and origin of pre-Alpine basement units in the Internal Hellenides has important implications for our in-depth understanding of the evolution of North Gondwana-derived terranes and consequently for alternative palaeotectonic reconstructions for the Palaeozoic and Mesozoic. A multidisciplinary sediment provenance study was undertaken since sedimentary rocks can provide information about rock lithologies in the source area, which have often been destroyed and recycled during ancient plate tectonic processes. Palaeozoic and Mesozoic sedimentary rocks from key areas of the Internal Hellenides were analysed using whole-rock major- and trace-element geochemistry (XRF, ICPMS), detrital chrome spinel, garnet, white mica and rutile chemistry (EMP), detrital zircon geochronology (SHRIMP, LA-ICPMS) and biostratigraphic analysis. These new data are used to constrain terrane accretion processes and the provenance of crustal sources for sediments during Palaeozoic and Mesozoic times and thus will test palaeotectonic models for the Internal Hellenides. This is expected to shed light on the Palaeo- and Neotethyan evolution in the Eastern Mediterranean.

  3. A proven knowledge-based approach to prioritizing process information

    NASA Technical Reports Server (NTRS)

    Corsberg, Daniel R.

    1991-01-01

    Many space-related processes are highly complex systems subject to sudden, major transients. In any complex process control system, a critical aspect is rapid analysis of the changing process information. During a disturbance, this task can overwhelm humans as well as computers. Humans deal with this by applying heuristics in determining significant information. A simple, knowledge-based approach to prioritizing information is described. The approach models those heuristics that humans would use in similar circumstances. The approach described has received two patents and was implemented in the Alarm Filtering System (AFS) at the Idaho National Engineering Laboratory (INEL). AFS was first developed for application in a nuclear reactor control room. It has since been used in chemical processing applications, where it has had a significant impact on control room environments. The approach uses knowledge-based heuristics to analyze data from process instrumentation and respond to that data according to knowledge encapsulated in objects and rules. While AFS cannot perform the complete diagnosis and control task, it has proven to be extremely effective at filtering and prioritizing information. AFS was used for over two years as a first level of analysis for human diagnosticians. Given the approach's proven track record in a wide variety of practical applications, it should be useful in both ground- and space-based systems.

  4. Lapis lazuli provenance study by means of micro-PIXE

    NASA Astrophysics Data System (ADS)

    Re, Alessandro; Giudice, Alessandro Lo; Angelici, Debora; Calusi, Silvia; Giuntini, Lorenzo; Massi, Mirko; Pratesi, Giovanni

    2011-10-01

    In this paper we report about the micro-PIXE characterisation of lapis lazuli, for a provenance study of this semi-precious stone, used for glyptic as early as 7000 years ago. The final aim is to find markers permitting to identify the origin of the raw material coming from three quarries in regions of historical importance: Afghanistan, Pamir Mountains and Siberia. This may help to reconstruct trade routes, especially for ancient objects for which written testimonies are scanty or absent at all. Due to the heterogeneity of lapis lazuli we concentrate our attention on single phases instead of the whole stone; in particular we focused on two of the main phases: lazurite, responsible for the blue colour, and diopside, the most frequent accessory mineral. This study was preceded and completed by means of microanalysis with Scanning Electron Microscopy (SEM-EDX) and Cold-Cathodoluminescence (cold-CL) analysis. Despite the limited number of analysed samples, results are sufficient to exclude/suggest a few features as provenance markers, partly confirming what has been previously published in literature.

  5. Triangulating the provenance of African elephants using mitochondrial DNA

    PubMed Central

    Ishida, Yasuko; Georgiadis, Nicholas J; Hondo, Tomoko; Roca, Alfred L

    2013-01-01

    African elephant mitochondrial (mt) DNA follows a distinctive evolutionary trajectory. As females do not migrate between elephant herds, mtDNA exhibits low geographic dispersal. We therefore examined the effectiveness of mtDNA for assigning the provenance of African elephants (or their ivory). For 653 savanna and forest elephants from 22 localities in 13 countries, 4258 bp of mtDNA was sequenced. We detected eight mtDNA subclades, of which seven had regionally restricted distributions. Among 108 unique haplotypes identified, 72% were found at only one locality and 84% were country specific, while 44% of individuals carried a haplotype detected only at their sampling locality. We combined 316 bp of our control region sequences with those generated by previous trans-national surveys of African elephants. Among 101 unique control region haplotypes detected in African elephants across 81 locations in 22 countries, 62% were present in only a single country. Applying our mtDNA results to a previous microsatellite-based assignment study would improve estimates of the provenance of elephants in 115 of 122 mis-assigned cases. Nuclear partitioning followed species boundaries and not mtDNA subclade boundaries. For taxa such as elephants in which nuclear and mtDNA markers differ in phylogeography, combining the two markers can triangulate the origins of confiscated wildlife products. PMID:23798975

  6. Provenance of Neoproterozoic sedimentary basement of northern Iran, Kahar Formation

    NASA Astrophysics Data System (ADS)

    Etemad-Saeed, Najmeh; Hosseini-Barzi, Mahboubeh; Adabi, Mohammad Hossein; Sadeghi, Abbas; Houshmandzadeh, Abdolrahim

    2015-11-01

    This article presents new data to understand the nature of the hidden crystalline basement of northern Iran and the tectonic setting of Iran during late Neoproterozoic time. The siliciclastic-dominated Kahar Formation represents the oldest known exposures of northern Iran and comprises late Ediacaran (ca. 560-550 Ma) compositionally immature sediments including mudrocks, sandstones, and conglomerates. This work focuses on provenance of three well preserved outcrops of this formation in Alborz Mountains: Kahar Mountain, Sarbandan, and Chalus Road, through petrographic and geochemical methods. Mineralogical Index of Alteration (MIA) and Chemical Index of Alteration (CIA-after correction for K-metasomatism) values combined with A-CN-K relations suggest moderate weathering in the source areas. The polymictic nature of Kahar conglomerates indicates a mixed provenance for them. However, modal analysis of Kahar sandstones (volcanic to plagioclase-rich lithic arkose) and whole rock geochemistry of mudrocks suggest that they are largely first-cycle sediments and that their sources were remarkably late Ediacaran, intermediate-felsic igneous rocks from proximal arc settings. Tectonic setting discrimination diagrams also indicate a convergent plate margin and continental arc related basin for Kahar sediments. This interpretation is supported by the phyllo-tectic to tectic composition and geochemistry of mudrocks. These results reveal the presence of a felsic/intermediate subduction-related basement (∼600-550 Ma) in this region, which provides new constraints on subduction scenario during this time interval in Iran, as a part of the Peri-Gondwanan terranes.

  7. Preventing aggressive prostate cancer with proven cardiovascular disease preventive methods.

    PubMed

    Moyad, Mark A

    2015-01-01

    Cardiovascular disease (CVD) has been the number one cause of death in the U.S. for 114 of the last 115 years. Risk factors for prostate cancer have primarily mirrored risk proven risk factors for CVD, especially aggressive disease. Obesity, dyslipidemia, glucose intolerance, metabolic syndrome, unhealthy dietary habits or caloric excess, lack of physical activity, and inflammation are just some of these shared risk factors. The evidence also suggests proven CVD preventive measures are identical to prostate cancer preventive measures, especially in regard to aggressive disease. Thus, apart from lifestyle measures that can encourage optimal heart and prostate health there are potentially several dietary supplements that need to be avoided in healthy men because they may also increase the risk of prostate cancer. However, there are also several low-cost, generic, safe in the appropriate individuals, and naturally derived agents that could reduce prostate cancer risk, and these can be discussed and remembered utilizing the acronym S.A.M. (statins, aspirin, and/or metformin). PMID:26112486

  8. Determining the Provenance of Late Paleozoic Loess Using Radiogenic Isotopes

    NASA Astrophysics Data System (ADS)

    Wiltse, M. R.; Aciego, S.; Soreghan, G. S.; Bailey, A.; Heavens, N. G.; Hinnov, L. A.

    2014-12-01

    Loess deposits in the sedimentary record of the Late Paleozoic tropics are anomalous because Quaternary loess is commonly glaciogenic, and thus confined to mid-high latitudes. The only loess in the tropics today is associated with mountain glaciation. Given the icehouse conditions of the Late Paleozoic, tropical loess could perhaps reflect sourcing from glaciogenic weathering in the Central Pangaean Mountains. Our goals are to constrain spatial and temporal variations in atmospheric "dustiness" and loess/dust provenance. To test the glacial weathering hypothesis and evaluate loess provenance, we collected preliminary data from two intervals (Moscovian or middle Pennsylvanian) of the Copacabana Formation, Madre de Dios Basin (Bolivia). Two 15-m sections representing carbonate inner platform environments were processed to separate the fine-grained silicate mineral fraction (SMF). Given the proximity to arc volcanism, ash fall could complicate the wind-blown weathering signal; initial work is aimed at assessing the volcanic versus continental inputs to the basin. Visual inspection and initial physical - chemical measurements of the dust-loess size fraction indicates discrete differences between the two sections, as well as between ash-rich and ash-poor intervals. The lower section has intervals with up to 72% suspected ash and SMF (non-ash) of 1-7%. The suspected ash layers in the lower section have higher grain sizes (20-40 µm) and distinct 143Nd/144Nd isotopic compositions (ɛNd = -3.5, -3.8) compared to the ash-poor intervals (8 µm, ɛNd = -5.0 to -8.8). The upper section, free of visible ash layers, has high SMF (mean 4-7% up to 41%) with similar size distributions (6-11 µm) and ɛNd (-7.4 to -7.7) to the lower section, but more radiogenic 87Sr/86Sr compositions (0.797 versus 0.71 - 0.75). The distinct physical and isotopic characteristics of the ash and SMF in the sections and sub-intervals suggests that deconvolving ash and loess/dust inputs will be possible

  9. Can cathodoluminescence of feldspar be used as provenance indicator?

    NASA Astrophysics Data System (ADS)

    Scholonek, Christiane; Augustsson, Carita

    2016-05-01

    We have studied feldspar from crystalline rocks for its textural and spectral cathodoluminescence (CL) characteristics with the aim to reveal their provenance potential. We analyzed ca. 60 rock samples of plutonic, volcanic, metamorphic, and pegmatitic origin from different continents and of 16 Ma to 2 Ga age for their feldspar CL textures and ca. 1200 feldspar crystals from these rocks for their CL color spectra. Among the analyzed rocks, igneous feldspar is most commonly zoned, whereby oscillatory zoning can be confirmed to be typical for volcanic plagioclase. The volcanic plagioclase also less commonly contains twin lamellae that are visible in CL light than crystals from other rock types. Alkali feldspar, particularly from igneous and pegmatitic rocks, was noted to be most affected by alteration features, visible as dark spots, lines and irregular areas. The size of all textural features of up to ca. 150 μm, in combination with possible alteration in both the source area and the sedimentary system, makes the CL textures of feldspar possible to use for qualitative provenance research only. We observed alkali feldspar mostly to luminesce in a bluish color and sometimes in red, and plagioclase in green to yellow. The corresponding CL spectra are dominated by three apparent intensity peaks at 440-520 nm (mainly blue), 540-620 nm (mainly green) and 680-740 nm (red to infrared). A dominance of the peak in the green wavelength interval over the blue one for plagioclase makes CL particularly useful for the differentiation of plagioclase from alkali feldspar. An apparent peak position in red to infrared at < 710 nm for plagioclase mainly is present in mafic rocks. Present-day coastal sand from Peru containing feldspar with the red to infrared peak position mainly exceeding 725 nm for northern Peruvian sand and a larger variety for sand from southern Peru illustrates a discriminative effect of different source areas. We conclude that the provenance application

  10. Cathodoluminescence of quartz and feldspar in provenance research

    NASA Astrophysics Data System (ADS)

    Augustsson, Carita; Reker, Annalena; Scholonek, Christiane

    2013-04-01

    Quartz often dominates in siliciclastic sandstone and feldspar mostly is present. Despite this, the use of quartz and feldspar in provenance research is limited. Feldspar is less stable than both quartz and many other minerals that are used to trace sources rocks, such as zircon and rutile. Nevertheless, particularly quartz and zircon may survive many sedimentary recycling phases. Therefore they do not necessarily give information about first-cycle sources. Hence, the wide occurrence of feldspar and quartz in sedimentary rocks is an excellent condition to trace both first-cycle and multi-cycle sediment sources. The cathodoluminescence (CL) technique enables the consideration of both minerals. We analysed ca. 1000 quartz crystals and ca. 1200 feldspar crystals in ca. 60 samples each for their CL colour spectra to investigate their provenance potential. They originate from different plutonic, volcanic, metamorphic, and pegmatitic rocks. The CL colours of quartz vary from red over violet to different shades of blue and brown. They are due to lattice defects and trace element contents that are caused by different crystallisation conditions and later lattice reorganisation. The corresponding CL spectra are dominated by two apparent intensity peaks at 470-490 nm (blue) and at 600-640 nm (red). Distinctive relative intensity differences in these two peaks occur for (1) quartz of volcanic origin, (2) felsic plutonic and high-temperature metamorphic quartz, and (3) low-temperature metamorphic quartz. Feldspar often luminesces in different shades of blue, green, yellow, and red due to substitution elements. Alkali feldspar usually has a bright blue colour and plagioclase often is green. The corresponding CL spectra are dominated by three apparent intensity peaks at 420-500 nm (blue), 540-570 nm (green) and 690-760 nm (red to infrared). The CL is particularly useful for the distinction of plagioclase from alkali feldspar. Here, a dominance of the peak in green over the peak

  11. Histopathologically Proven Autoimmune Pancreatitis Mimicking Neuroendocrine Tumor or Pancreatic Cancer

    PubMed Central

    Onda, Shinji; Okamoto, Tomoyoshi; Kanehira, Masaru; Fujioka, Shuichi; Harada, Tohru; Hano, Hiroshi; Fukunaga, Masaharu; Yanaga, Katsuhiko

    2012-01-01

    Autoimmune pancreatitis (AIP) can be difficult to distinguish from pancreatic cancer. We report a case of histopathologically proven AIP mimicking neuroendocrine tumor (NET) or pancreatic cancer in a 53-year-old man. He was referred to our hospital for further evaluation of a pancreatic mass detected on ultrasonography at a medical check-up. Abdominal ultrasonography showed a 15-mm hypoechoic mass located in the pancreatic body. Computed tomography revealed a tumor without any contrast enhancement, and magnetic resonance imaging demonstrated the mass to be hyperintense on diffusion-weighted image. Endoscopic retrograde cholangiopancreatography revealed slight dilatation of a branch of the pancreatic duct without stricture of the main pancreatic duct. The common bile duct seemed intact. Under suspicion of a non-functioning NET or malignant neoplasm, laparotomy was performed. At laparotomy, an elastic firm and well-circumscribed mass was found suggestive of a non-functioning NET, thus enucleation was performed. Histopathologically, the lesion corresponded to AIP. PMID:22423237

  12. Functional Requirements for Information Resource Provenance on the Web

    SciTech Connect

    McCusker, James P.; Lebo, Timothy; Graves, Alvaro; Difranzo, Dominic; Pinheiro da Silva, Paulo; McGuinness, Deborah L.

    2012-06-19

    We provide a means to formally explain the relationship between HTTP URLs and the representations returned when they are requested. According to existing World Wide Web architecture, the URL serves as an identier for a semiotic referent while the document returned via HTTP serves as a representation of the same referent. This begins with two sides of a semiotic triangle; the third side is the relationship between the URL and the representation received. We complete this description by extending the library science resource model Functional Requirements for Bibliographic Resources (FRBR) with cryptographic message and content digests to create a Functional Requirements for Information Resources (FRIR). We show how applying the FRIR model to HTTP GET and POST transactions disambiguates the many relationships between a given URL and all representations received from its request, provides fine-grained explanations that are complementary to existing explanations of web resources, and integrates easily into the emerging W3C provenance standard.

  13. Provenance of Apollo 15 deep drill core sediments

    NASA Technical Reports Server (NTRS)

    Basu, A.; Bower, J. F.

    1977-01-01

    Modal analysis and electron probe microanalysis were performed on polished thin sections prepared from Apollo 15 deep drill core soils in an effort to characterize their provenance. The particles were in the 0.25-1.00 mm size range. The particles were classified into mineral fragments, agglutinates, glasses, rock fragments, and breccias. The results show that highland and mare material occur in the core in an approximately 60:40 ratio, with mare component generally increasing from bottom to top in the core. Quartz-normative basalts are nearly twice as abundant as olivine basalts. Nonmare sources include KREEP basalt flow units from some depth in the crust, excavated by cratering events and supplied to the site as 'rays'.

  14. Federated provenance of oceanographic research cruises: from metadata to data

    NASA Astrophysics Data System (ADS)

    Thomas, Rob; Leadbetter, Adam; Shepherd, Adam

    2016-04-01

    The World Wide Web Consortium's Provenance Data Model and associated Semantic Web ontology (PROV-O) have created much interest in the Earth and Space Science Informatics community (Ma et al., 2014). Indeed, PROV-O has recently been posited as an upper ontology for the alignment of various data models (Cox, 2015). Similarly, PROV-O has been used as the building blocks of a data release lifecycle ontology (Leadbetter & Buck, 2015). In this presentation we show that the alignment between different local data descriptions of an oceanographic research cruise can be achieved through alignment with PROV-O and that descriptions of the funding bodies, organisations and researchers involved in a cruise and its associated data release lifecycle can be modelled within a PROV-O based environment. We show that, at a first-order, this approach is scalable by presenting results from three endpoints (the Biological and Chemical Oceanography Data Management Office at Woods Hole Oceanographic Institution, USA; the British Oceanographic Data Centre at the National Oceanography Centre, UK; and the Marine Institute, Ireland). Current advances in ontology engineering, provide pathways to resolving reasoning issues from varying perspectives on implementing PROV-O. This includes the use of the Information Object design pattern where such edge cases as research cruise scheduling efforts are considered. PROV-O describes only things which have happened, but the Information Object design pattern allows for the description of planned research cruises through its statement that the local data description is not the the entity itself (in this case the planned research cruise) and therefore the local data description itself can be described using the PROV-O model. In particular, we present the use of the data lifecycle ontology to show the connection between research cruise activities and their associated datasets, and the publication of those data sets online with Digital Object Identifiers and

  15. A Multi-Tier Provenance Model for Global Climate Research

    SciTech Connect

    Stephan, Eric G.; Halter, Todd D.; Gibson, Tara D.; Beagley, Nathaniel; Schuchardt, Karen L.

    2009-08-19

    Global climate researchers rely upon many forms of sensor data and analytical methods to help profile subtle changes in climate conditions. The U.S. Department of Energy Atmospheric Radiation Measurement (ARM) program provides researchers with curated products called Value Added Products (VAPs) resulting from continuous instrumentation streams, data fusion, and analytical profiling. To provide these projects the ARM operations and research teams rely upon a number of techniques to ensure strict quality control and quality assurance codes are maintained. End users in the climate research community are highly interested in obtaining as much causal evidence as possible and currently either not all the evidence are easily attainable or easily identifiable without significant effort. Our research interests are to identify a provenance model that serves both the producers and consumers of the VAP maintaining the quality assurance/quality control standards and tailored to meeting the individual researcher’s needs.

  16. EFVs' effectiveness proven on new residential service lines

    SciTech Connect

    Oleksa, P.E. )

    1991-12-01

    East Ohio Gas Company's experience with excess flow valves (EFV) has proven to be effective on new and renewed single-meter residential service lines with 10 psig or higher operating pressure. This paper reports that over a 15-year period, East Ohio has installed more than 200,000 such valves. The company's positive experience shows that EFVs can be an important part of service line design. However, each gas company should consider the applicability of excess flow valves to their own piping system. EFVs should be used only where the company determines they are appropriate. Installation of these valves should not be forced into locations where they would be counter-productive instead of contributing to pipe line safety.

  17. Multitechnique characterization of lapis lazuli for provenance study.

    PubMed

    Lo Giudice, Alessandro; Re, Alessandro; Calusi, Silvia; Giuntini, Lorenzo; Massi, Mirko; Olivero, Paolo; Pratesi, Giovanni; Albonico, Maria; Conz, Elisa

    2009-12-01

    Lapis lazuli is one of the oldest precious stone, being used for glyptic as early as 7,000 years ago: jewels, amulets, seals, and inlays are examples of objects produced using this material. Only a few sources of lapis lazuli exist in the world due to the low probability of geological conditions in which it can form, so that the possibility to associate the raw material to man-made objects helps to reconstruct trade routes. Since art objects produced using lapis lazuli are valuable, only nondestructive investigations can be carried out to identify the provenance of the raw materials. Ionoluminescence (IL) is a good candidate for this task. Similar to cathodoluminescence (CL), IL consists in the collection of luminescence spectra induced by megaelectronvolt ion (usually protons) irradiation. The main advantage of IL consists in the possibility of working in air while measuring simultaneously the composition of major and trace elements by means of complementary ion beam analysis techniques like particle-induced X-ray emission (PIXE) or particle-induced gamma-ray emission (PIGE). In the present work, a systematic study of the luminescence properties of lapis lazuli under charged particle irradiation is reported. In the first phase, a multitechnique approach was adopted (CL, scanning electron microscopy with microanalysis, micro-Raman) to characterize luminescent minerals. This characterization was propaedeutic for IL/PIXE/PIGE measurements carried out on significant areas selected on the basis of results obtained previously. Criteria to identify provenance of lapis lazuli from four of the main sources (Afghanistan, Pamir Mountains in Tajikistan, Chile, and Siberia) were proposed. PMID:19705108

  18. Translocations of amphibians: Proven management method or experimental technique

    USGS Publications Warehouse

    Seigel, Richard A.; Dodd, C. Kenneth

    2002-01-01

    In an otherwise excellent review of metapopulation dynamics in amphibians, Marsh and Trenham (2001) make the following provocative statements (emphasis added): If isolation effects occur primarily in highly disturbed habitats, species translocations may be necessary to promote local and regional population persistence. Because most amphibians lack parental care, they areprime candidates for egg and larval translocations. Indeed, translocations have already proven successful for several species of amphibians. Where populations are severely isolated, translocations into extinct subpopulations may be the best strategy to promote regional population persistence. We take issue with these statements for a number of reasons. First, the authors fail to cite much of the relevant literature on species translocations in general and for amphibians in particular. Second, to those unfamiliar with current research in amphibian conservation biology, these comments might suggest that translocations are a proven management method. This is not the case, at least in most instances where translocations have been evaluated for an appropriate period of time. Finally, the authors fail to point out some of the negative aspects of species translocation as a management method. We realize that Marsh and Trenham's paper was not concerned primarily with translocations. However, because Marsh and Trenham (2001) made specific recommendations for conservation planners and managers (many of whom are not herpetologists or may not be familiar with the pertinent literature on amphibians), we believe that it is essential to point out that not all amphibian biologists are as comfortable with translocations as these authors appear to be. We especially urge caution about advocating potentially unproven techniques without a thorough review of available options.

  19. Multi-Method Provenance Analysis of Namibian Desert Sand

    NASA Astrophysics Data System (ADS)

    Vermeesch, P.; Garzanti, E.

    2014-12-01

    Mineralogical, geochemical and geochronological provenance proxies each have their own strengths and weaknesses: a. Bulk geochemistry, framework petrography and heavy mineral compositions can differentiate between source areas characterised by different lithologies, but are sensitive to hydraulic sorting and chemical alteration. b. Detrital zircon U-Pb geochronology is insensitive to winnowing effects, but is 'blind' to lithologies devoid of zircon and cannot differentiate between first cycle and recycled sediments. c. Cosmogenic neon isotopes can be used to identify different generations of surface exposure while simultaneously tracking different magmatic sources. The challenge is then to combine these different proxies into a self consistent story, and do so in as objective a manner as possible. We here present a case study of Namibia's Namib Sand Sea and Skeleton Coast ergs, in which all the aforementioned methods have been combined using a three-way multidimensional scaling (aka INDividual Differences SCALing or INDSCAL) analysis: 1. Each of the datasets was represented by a 'dissimilarity matrix' of pairwise distances between samples. 2. The set of these matrices was fed into the INDSCAL algorithm, which produces two pieces of graphical output: the 'group configuration', which is a scatter plot or 'map' in which similar samples plot close together and dissimilar samples plot far apart, and the 'proxy weights', in which not the samples but the proxies are plotted according to the weight they attached to the 'group configuration' axes. The INDSCAL map of the Namibia dataset indicates that (a) long-shore drift of Orange River sediments dominates the coastal sediment compositions all along the Namibian coast until Angola, and (b) that light and heavy minerals tell complementary parts of the provenance story.

  20. ASDF: An Adaptable Seismic Data Format with Full Provenance

    NASA Astrophysics Data System (ADS)

    Smith, J. A.; Krischer, L.; Tromp, J.; Lefebvre, M. P.

    2015-12-01

    In order for seismologists to maximize their knowledge of how the Earth works, they must extract the maximum amount of useful information from all recorded seismic data available for their research. This requires assimilating large sets of waveform data, keeping track of vast amounts of metadata, using validated standards for quality control, and automating the workflow in a careful and efficient manner. In addition, there is a growing gap between CPU/GPU speeds and disk access speeds that leads to an I/O bottleneck in seismic workflows. This is made even worse by existing seismic data formats that were not designed for performance and are limited to a few fixed headers for storing metadata.The Adaptable Seismic Data Format (ASDF) is a new data format for seismology that solves the problems with existing seismic data formats and integrates full provenance into the definition. ASDF is a self-describing format that features parallel I/O using the parallel HDF5 library. This makes it a great choice for use on HPC clusters. The format integrates the standards QuakeML for seismic sources and StationXML for receivers. ASDF is suitable for storing earthquake data sets, where all waveforms for a single earthquake are stored in a one file, ambient noise cross-correlations, and adjoint sources. The format comes with a user-friendly Python reader and writer that gives seismologists access to a full set of Python tools for seismology. There is also a faster C/Fortran library for integrating ASDF into performance-focused numerical wave solvers, such as SPECFEM3D_GLOBE. Finally, a GUI tool designed for visually exploring the format exists that provides a flexible interface for both research and educational applications. ASDF is a new seismic data format that offers seismologists high-performance parallel processing, organized and validated contents, and full provenance tracking for automated seismological workflows.

  1. Multitechnique characterization of lapis lazuli for provenance study.

    PubMed

    Lo Giudice, Alessandro; Re, Alessandro; Calusi, Silvia; Giuntini, Lorenzo; Massi, Mirko; Olivero, Paolo; Pratesi, Giovanni; Albonico, Maria; Conz, Elisa

    2009-12-01

    Lapis lazuli is one of the oldest precious stone, being used for glyptic as early as 7,000 years ago: jewels, amulets, seals, and inlays are examples of objects produced using this material. Only a few sources of lapis lazuli exist in the world due to the low probability of geological conditions in which it can form, so that the possibility to associate the raw material to man-made objects helps to reconstruct trade routes. Since art objects produced using lapis lazuli are valuable, only nondestructive investigations can be carried out to identify the provenance of the raw materials. Ionoluminescence (IL) is a good candidate for this task. Similar to cathodoluminescence (CL), IL consists in the collection of luminescence spectra induced by megaelectronvolt ion (usually protons) irradiation. The main advantage of IL consists in the possibility of working in air while measuring simultaneously the composition of major and trace elements by means of complementary ion beam analysis techniques like particle-induced X-ray emission (PIXE) or particle-induced gamma-ray emission (PIGE). In the present work, a systematic study of the luminescence properties of lapis lazuli under charged particle irradiation is reported. In the first phase, a multitechnique approach was adopted (CL, scanning electron microscopy with microanalysis, micro-Raman) to characterize luminescent minerals. This characterization was propaedeutic for IL/PIXE/PIGE measurements carried out on significant areas selected on the basis of results obtained previously. Criteria to identify provenance of lapis lazuli from four of the main sources (Afghanistan, Pamir Mountains in Tajikistan, Chile, and Siberia) were proposed.

  2. Eastern Equatorial Pacific Dust Provenance on Deglacial Timescales

    NASA Astrophysics Data System (ADS)

    Xie, R.; Marcantonio, F.

    2008-12-01

    Changing patterns of eolian dust deposition preserved in deep-sea sediments have the potential to provide us with a better understanding of changes in past atmospheric circulation. One way in which to determine the provenance of dust in deep-sea sediments is to use radiogenic isotopic tracers which can fingerprint potential dust sources. Models (e.g., [1]) suggest that sources of dust to the Eastern Equatorial Pacific (EEP) are from areas as diverse as Asia, North, Central, and South America, and, perhaps, even Africa. Here, we investigate spatial and temporal changes in the provenance of the eolian component in the EEP by measuring Pb, Sr, and Nd isotope ratios in dust extracted from sediments along a transect at 110oW from 7oN to 3oS (ODP sites 853 - 848). In this region, although fluxes of dust were higher during the last glacial maximum (LGM) than those in the Holocene by up to 100%, the glacial flux of dust displayed a shallower meridional gradient [2]. However, it is unclear whether this shallower gradient is due to a mean southerly displacement of the Intertropical Convergence Zone (ITCZ). Most of the dust trying to pass through the ITCZ will be scavenged and rained out at the ITCZ. Along the meridional gradient, therefore, temporal variations in the Pb, Sr, and Nd isotopic fingerprints of the distinct dust sources will determine the extent to which the position of the ITCZ changes on deglacial timescales. [1] Mahowald et al., 2005, Global Biogeochemical Cycles 19, GB4025. [2] McGee et al., 2007, EPSL 257, 215-230.

  3. Provenance In Sensor Data Management: A Cohesive, Independent Solution

    SciTech Connect

    Hensley, Zachary P; Sanyal, Jibonananda; New, Joshua Ryan

    2014-01-01

    In today's information-driven workplaces, data is constantly undergoing transformations and being moved around. The typical business-as-usual approach is to use email attachments, shared network locations, databases, and now, the cloud. More often than not, there are multiple versions of the data sitting in different locations and users of this data are confounded by the lack of metadata describing its provenance, or in other words, its lineage. Our project is aimed to solve this issue in the context of sensor data. The Oak Ridge National Laboratory's Building Technologies Research and Integration Center has reconfigurable commercial buildings deployed on the Flexible Research Platforms (FRPs). These FRPs are instrumented with a large number of sensors which measure a number of variables such as HVAC efficiency, relative humidity, and temperature gradients across doors, windows, and walls. Sub-minute resolution data from hundreds of channels is acquired. This sensor data, traditionally, was saved to a shared network location which was accessible to a number of scientists for performing complicated simulation and analysis tasks. The sensor data also participates in elaborate quality assurance exercises as a result of inherent faults. Sometimes, faults are induced to observe building behavior. It became apparent that proper scientific controls required not just managing the data acquisition and delivery, but to also manage the metadata associated with temporal subsets of the sensor data. We built a system named ProvDMS, or Provenance Data Management System for the FRPs, which would both allow researchers to retrieve data of interest as well as trace data lineage. This provides researchers a one-stop shop for comprehensive views of various data transformation allowing researchers to effectively trace their data to its source so that experiments, and derivations of experiments, may be reused and reproduced without much overhead of the repeatability of experiments that

  4. Provenance and sediment fluxes in the Irrawaddy (Ayeyarwadi) River

    NASA Astrophysics Data System (ADS)

    Garzanti, Eduardo; Wang, Jiangang; Vezzoli, Giovanni; Limonta, Mara

    2016-04-01

    The Irrawaddy (Ayeyarwadi) River, still a natural system scarcely affected by human activities, ranks among the five major rivers in the world for its annual suspended load, estimated as 364±60 million tons (Robinson et al., 2007). Sourced in Himalayan glaciers southeast of the eastern Himalayan syntaxis at ca. 28°N, the Irrawaddy originates from the confluence of the Nmai and Mali Rivers, flows southward to receive its major Chindwin tributary in the middle of the central Myanmar Basin, and eventually empties through a nine-armed delta into the Andaman Sea. The compositional fingerprint of bedload sand in the upper Irrawaddy is characterized by common feldspars, medium/high rank of metamorphic rock fragments and high heavy-mineral concentration, reflecting provenance from mid-crustal granitoids, amphibolite-facies and subordinately greenschist-facies rocks widely exposed in the Mogok Belt and Lohit Plutonic Complex. Minor volcanic/metavolcanic and serpentinite grains indicate additional supply from volcanic-arc remnants and the Neotethyan ophiolitic suture. Sand of the Chindwin River has much higher quartz/feldspar ratio and much lower metamorphic indices and heavy-mineral concentration, reflecting provenance mainly from upper crustal sedimentary and very low-grade metasedimentary rocks exposed in the Indo-Burman Ranges (Garzanti et al., 2013). Feldspatho-litho-quartzose to litho-feldspatho-quartzose composition in the lower Irrawaddy is intermediate between that of Chindwin and upper Irrawaddy sand. The slight progressive downstream increase in volcanic rock fragments and chert, and decrease in metamorphic indices, point to additional local supply from volcanic and sedimentary cover rocks. U-Pb age spectra of detrital zircons are characterized by a major cluster between 30 and 150 Ma, corresponding to the long-lasting magmatic activity of the Western Myanmar Arc (Wang et al., 2014), with other clusters at 500-600 Ma and 800-1200 Ma, and a few ages between 1

  5. Detrital shocked minerals: microstructural provenance indicators of impact craters

    NASA Astrophysics Data System (ADS)

    Cavosie, A. J.

    2014-12-01

    The study of detrital shocked minerals (DSMs) merges planetary science, sedimentology, mineralogy/crystallography, accessory mineral geochemistry, and geochronology, with the goal of identifying and determining provenance of shock metamorphosed sand grains. Diagnostic high-pressure impact-generated microstructures (planar fractures, planar deformation features) are readily identified on external grain surfaces using standard SEM imaging methods (BSE), and when found, unambiguously confirm an impact origin for a given sand grain. DSMs, including quartz, zircon, monazite, and apatite, have thus far been documented at the Vredefort Dome [1,2,3], Sudbury [4], Rock Elm [5], and Santa Fe [6,7] impact structures. DSMs have been identified in alluvium, colluvium, beach sand, and glacial deposits. Two main processes are recognized that imply the global siliciclastic record contains DSMs: they survive extreme distal transport, and they survive 'deep time' lithification. Distal transport: In South Africa, shocked minerals are preserved in alluvium from the Vaal River >750 km downstream from the Vredefort impact; SHRIMP U-Pb geochronology has confirmed the origin of detrital shocked zircon and monazite from shocked Vredefort bedrock [2]. Vredefort-derived shocked zircons have also been found at the mouth of the Orange River on the Atlantic coast, having travelled ~2000 km downriver from Vredefort [8]. Deep time preservation: Vredefort-derived shocked zircon and quartz has been documented in glacial diamictite from the 300 Myr-old Dwyka Group in South Africa. Shocked minerals were thus entrained and transported in Paleozoic ice sheets that passed over Vredefort [9]. An impact crater can thus be viewed as a unique 'point source', in some cases for billions of years [2,4]; DSMs thus have applications in studying eroded impact craters, sedimentary provenance, landscape evolution, and long-term sediment transport processes throughout the geologic record. This work was supported by

  6. Geochemical Signatures as a Tool for Vermiculite Provenance Determination

    SciTech Connect

    Karen E. Wright; Carl D. Palmer

    2008-09-01

    Thirty-eight samples of known origin (China, Libby MT, South Africa, South Carolina) and 6 vermiculite product samples of unknown origin were analyzed for major and trace elements, including rare earth elements to determine the feasibility of distinguishing the provenance of the samples based upon a geochemical signature. Probability plots suggest that two of the four groups (Libby, South Carolina) were comprised of two subgroups. Results of hierarchical cluster analysis are highly sensitive to the linkage method chosen. Ward’s method is the most useful for this data and suggests that there are five groups within the data set (South African samples, two subsets of the Libby samples, a subset of the South Carolina samples, and a second subset of the South Carolina samples combined with the China samples). Similar results were obtained using k-cluster analysis. Neither clustering method was able to distinguish samples from China from the South Carolina samples. Discriminant analysis was used on a four-category model comprised of the original four groups and on a six-category model comprised of the five categories identified from the cluster analysis but with the China samples grouped into a sixth category. The discriminant/classification model was able to distinguish all of the groups including the China samples from one another for both the four- and six-category models with 100% of the samples properly classified. The 6 unknown product samples were classified with a probability of consistency of 99%. Both discriminant models were also run with a subset of our analyte set to be consistent with the smaller Gunter et al., (2005) analyte set. Twenty vermiculite samples (nine of known origin and eleven of unknown origin) from their study were classified based on our discriminant models with the reduced set of analytes. Of the twenty samples, Gunter et al. (2005) was able to classify 16 with cluster analysis while our 4-category discriminant analysis model allowed us

  7. A global renewable mix with proven technologies and common materials

    NASA Astrophysics Data System (ADS)

    Ballabrera, J.; Garcia-Olivares, A.; Garcia-Ladona, E.; Turiel, A.

    2012-04-01

    A global alternative mix to fossil fuels is proposed, based on proven renewable energy technologies that do not use scarce materials. Taking into account the availability of materials, the resulting mix consists of a combination of onshore and offshore wind turbines, concentrating solar power stations, hydroelectricity and wave power devices attached to the offshore turbines. Solar photovoltaic power could contribute to the mix if its dependence on scarce materials is solved. Material requirements are studied for the generation, power transport and for some future transport systems. The order of magnitude of copper, aluminium, neodymium, lithium, nickel, zinc and platinum that might be required for the proposed solution is obtained and compared with available reserves. While the proposed global alternative to fossil fuels seems technically feasible, lithium, nickel and platinum could become limiting materials for future vehicles fleet if no global recycling system were implemented and rechargeable zinc-air batteries could not be developed. As much as 60% of the current copper reserves would have to be employed in the implementation of the proposed solution. Altogether, the availability of materials may become a long-term physical constraint, preventing the continuation of the usual exponential growth of energy consumption.

  8. Numerical analysis of sandstone composition, provenance, and paleogeography

    SciTech Connect

    Smosma, R.; Bruner, K.R.; Burns, A.

    1999-09-01

    Cretaceous deltaic sandstones of the National Petroleum Reserve in Alaska exhibit an extreme variability in their mineral makeup. A series of numerical techniques, however, provides some order to the petrographic characteristics of these complex rocks. Ten mineral constituents occur in the sandstones, including quartz, chert, feldspar, mica, and organic matter, plus rock fragments of volcanics, carbonates, shale, phyllite, and schist. A mixing coefficient quantities the degree of heterogeneity in each sample. Hierarchical cluster analysis then groups sandstones on the basis of similarities among all ten mineral components--in the Alaskan example, six groupings characterized mainly by the different rock fragments. Multidimensional scaling shows how the clusters relate to one another and arranges them along compositional gradients--two trends in Alaska based on varying proportions of metamorphic/volcanic and shale/carbonate rock fragments. The resulting sandstone clusters and petrographic gradients can be mapped across the study area and compared with the stratigraphic section. This study confirms the presence of three different source areas that provided diverse sediment to the Cretaceous deltas as well as the general transport directions and distances. In addition, the sand composition is shown to have changed over time, probably related to erosional unroofing in the source areas. This combination of multivariate-analysis techniques proves to be a powerful tool, revealing subtle spatial and temporal relationships among the sandstones and allowing one to enhance provenance and paleogeographic conclusions made from compositional data.

  9. LQCD workflow execution framework: Models, provenance and fault-tolerance

    NASA Astrophysics Data System (ADS)

    Piccoli, Luciano; Dubey, Abhishek; Simone, James N.; Kowalkowlski, James B.

    2010-04-01

    Large computing clusters used for scientific processing suffer from systemic failures when operated over long continuous periods for executing workflows. Diagnosing job problems and faults leading to eventual failures in this complex environment is difficult, specifically when the success of an entire workflow might be affected by a single job failure. In this paper, we introduce a model-based, hierarchical, reliable execution framework that encompass workflow specification, data provenance, execution tracking and online monitoring of each workflow task, also referred to as participants. The sequence of participants is described in an abstract parameterized view, which is translated into a concrete data dependency based sequence of participants with defined arguments. As participants belonging to a workflow are mapped onto machines and executed, periodic and on-demand monitoring of vital health parameters on allocated nodes is enabled according to pre-specified rules. These rules specify conditions that must be true pre-execution, during execution and post-execution. Monitoring information for each participant is propagated upwards through the reflex and healing architecture, which consists of a hierarchical network of decentralized fault management entities, called reflex engines. They are instantiated as state machines or timed automatons that change state and initiate reflexive mitigation action(s) upon occurrence of certain faults. We describe how this cluster reliability framework is combined with the workflow execution framework using formal rules and actions specified within a structure of first order predicate logic that enables a dynamic management design that reduces manual administrative workload, and increases cluster-productivity.

  10. Provenance of the K/T boundary layers

    NASA Technical Reports Server (NTRS)

    Hildebrand, A. R.; Boynton, W. V.

    1988-01-01

    An array of chemical, physical and isotopic evidence indicates that an impact into oceanic crust terminated the Cretaceous Period. Approximately 1500 cu km of debris, dispersed by the impact fireball, fell out globally in marine and nonmarine environments producing a 2 to 4 mm thick layer (fireball layer). In North American locales, the fireball layer overlies a 15 to 25 mm thick layer of similar but distinct composition. This 15 to 25 mm layer (ejecta layer) may represent approximately 1000 cu km of lower energy ejecta from a nearby impact site. Isotopic and chemical evidence supports a mantle provenance for the bulk of the layers. The extraordinary REE pattern of the boundary clays was modelled as a mixture of oceanic crust, mantle, and approximately 10 percent continental material. The results are presented. If the siderophiles of the ejecta layer were derived solely from the mantle, a test may be available to see if the siderophile element anomaly of the fireball layer had an extraterrestrial origin. Radiogenic Os-187 is depleted in the mantle relative to an undifferentiated chondritic source. Os-187/Os-186 ratios of 1.049 and 1.108 were calculated for the ejecta and fireball layers, respectively.

  11. Apollo 16 Mafic Glass: Geochemistry, Provenance, and Implications

    NASA Technical Reports Server (NTRS)

    Zeigler, R. A.; Korotev, R. L.; Jolliff, B. L.; Haskin, L. A.; Floss, C.

    2004-01-01

    Although the Apollo 16 mission landed in the feldspathic lunar highlands, mass-balance models suggest that there is a 5-6% mare component in the mature soils collected at the site. Only one mare basalt greater than 1 cm was found and two surveys of 2-4 mm particles found that less than 1% of this size fraction is mare basalt. Similar surveys of the less than 1 mm size fraction of A16 soils found very little lithic mare basalt, but several percent of basaltic green, yellow, and orange glass. The green glass beads were identified as VLT picritic glass and the orange/yellow glass shards were a mix of high and low Ti mare-like glass, high-Al basaltic glass, and KREEPy glasses. Most previous studies of glasses in the A16 regolith were surveys that identified a high proportion of feldspathic glass because most of the glass is produced by local impacts. Because the number of mafic glasses found was low, few compositional groupings were identified. As part of our ongoing study of the mafic components of the Apollo 16 site, we specifically targeted mafic glasses from Apollo 16, selecting against the more feldspathic glasses. In this way we were able to identify over 300 mafic glasses (greater than 10 wt % FeO). We present here the major- and trace-element chemistry of the main glass groups and discuss the likely provenance of each group.

  12. Provenance of Earth Science Datasets - How Deep Should One Go?

    NASA Astrophysics Data System (ADS)

    Ramapriyan, H.; Manipon, G. J. M.; Aulenbach, S.; Duggan, B.; Goldstein, J.; Hua, H.; Tan, D.; Tilmes, C.; Wilson, B. D.; Wolfe, R.; Zednik, S.

    2015-12-01

    For credibility of scientific research, transparency and reproducibility are essential. This fundamental tenet has been emphasized for centuries, and has been receiving increased attention in recent years. The Office of Management and Budget (2002) addressed reproducibility and other aspects of quality and utility of information from federal agencies. Specific guidelines from NASA (2002) are derived from the above. According to these guidelines, "NASA requires a higher standard of quality for information that is considered influential. Influential scientific, financial, or statistical information is defined as NASA information that, when disseminated, will have or does have clear and substantial impact on important public policies or important private sector decisions." For information to be compliant, "the information must be transparent and reproducible to the greatest possible extent." We present how the principles of transparency and reproducibility have been applied to NASA data supporting the Third National Climate Assessment (NCA3). The depth of trace needed of provenance of data used to derive conclusions in NCA3 depends on how the data were used (e.g., qualitatively or quantitatively). Given that the information is diligently maintained in the agency archives, it is possible to trace from a figure in the publication through the datasets, specific files, algorithm versions, instruments used for data collection, and satellites, as well as the individuals and organizations involved in each step. Such trace back permits transparency and reproducibility.

  13. SensePath: Understanding the Sensemaking Process Through Analytic Provenance.

    PubMed

    Nguyen, Phong H; Xu, Kai; Wheat, Ashley; Wong, B L William; Attfield, Simon; Fields, Bob

    2016-01-01

    Sensemaking is described as the process of comprehension, finding meaning and gaining insight from information, producing new knowledge and informing further action. Understanding the sensemaking process allows building effective visual analytics tools to make sense of large and complex datasets. Currently, it is often a manual and time-consuming undertaking to comprehend this: researchers collect observation data, transcribe screen capture videos and think-aloud recordings, identify recurring patterns, and eventually abstract the sensemaking process into a general model. In this paper, we propose a general approach to facilitate such a qualitative analysis process, and introduce a prototype, SensePath, to demonstrate the application of this approach with a focus on browser-based online sensemaking. The approach is based on a study of a number of qualitative research sessions including observations of users performing sensemaking tasks and post hoc analyses to uncover their sensemaking processes. Based on the study results and a follow-up participatory design session with HCI researchers, we decided to focus on the transcription and coding stages of thematic analysis. SensePath automatically captures user's sensemaking actions, i.e., analytic provenance, and provides multi-linked views to support their further analysis. A number of other requirements elicited from the design session are also implemented in SensePath, such as easy integration with existing qualitative analysis workflow and non-intrusive for participants. The tool was used by an experienced HCI researcher to analyze two sensemaking sessions. The researcher found the tool intuitive and considerably reduced analysis time, allowing better understanding of the sensemaking process.

  14. A proven approach for more effective software development and maintenance

    NASA Technical Reports Server (NTRS)

    Pajerski, Rose; Hall, Dana; Sinclair, Craig

    1994-01-01

    Modern space flight mission operations and associated ground data systems are increasingly dependent upon reliable, quality software. Critical functions such as command load preparation, health and status monitoring, communications link scheduling and conflict resolution, and transparent gateway protocol conversion are routinely performed by software. Given budget constraints and the ever increasing capabilities of processor technology, the next generation of control centers and data systems will be even more dependent upon software across all aspects of performance. A key challenge now is to implement improved engineering, management, and assurance processes for the development and maintenance of that software; processes that cost less, yield higher quality products, and that self-correct for continual improvement evolution. The NASA Goddard Space Flight Center has a unique experience base that can be readily tapped to help solve the software challenge. Over the past eighteen years, the Software Engineering Laboratory within the code 500 Flight Dynamics Division has evolved a software development and maintenance methodology that accommodates the unique characteristics of an organization while optimizing and continually improving the organization's software capabilities. This methodology relies upon measurement, analysis, and feedback much analogous to that of control loop systems. It is an approach with a time-tested track record proven through repeated applications across a broad range of operational software development and maintenance projects. This paper describes the software improvement methodology employed by the Software Engineering Laboratory, and how it has been exploited within the Flight Dynamics Division with GSFC Code 500. Examples of specific improvement in the software itself and its processes are presented to illustrate the effectiveness of the methodology. Finally, the initial findings are given when this methodology was applied across the

  15. Infrared reflectance spectra: effects of particle size, provenance and preparation

    NASA Astrophysics Data System (ADS)

    Su, Yin-Fong; Myers, Tanya L.; Brauer, Carolyn S.; Blake, Thomas A.; Forland, Brenda M.; Szecsody, J. E.; Johnson, Timothy J.

    2014-10-01

    We have recently developed methods for making more accurate infrared total and diffuse directional - hemispherical reflectance measurements using an integrating sphere. We have found that reflectance spectra of solids, especially powders, are influenced by a number of factors including the sample preparation method, the particle size and morphology, as well as the sample origin. On a quantitative basis we have investigated some of these parameters and the effects they have on reflectance spectra, particularly in the longwave infrared. In the IR the spectral features may be observed as either maxima or minima: In general, upward-going peaks in the reflectance spectrum result from strong surface scattering, i.e. rays that are reflected from the surface without bulk penetration, whereas downward-going peaks are due to either absorption or volume scattering, i.e. rays that have penetrated or refracted into the sample interior and are not reflected. The light signals reflected from solids usually encompass all such effects, but with strong dependencies on particle size and preparation. This paper measures the reflectance spectra in the 1.3 - 16 micron range for various bulk materials that have a combination of strong and weak absorption bands in order to observe the effects on the spectral features: Bulk materials were ground with a mortar and pestle and sieved to separate the samples into various size fractions between 5 and 500 microns. The median particle size is demonstrated to have large effects on the reflectance spectra. For certain minerals we also observe significant spectral change depending on the geologic origin of the sample. All three such effects (particle size, preparation and provenance) result in substantial change in the reflectance spectra for solid materials; successful identification algorithms will require sufficient flexibility to account for these parameters.

  16. Infrared reflectance spectra: Effects of particle size, provenance and preparation

    SciTech Connect

    Su, Yin-Fong; Myers, Tanya L.; Brauer, Carolyn S.; Blake, Thomas A.; Forland, Brenda M.; Szecsody, James E.; Johnson, Timothy J.

    2014-09-22

    We have recently developed methods for making more accurate infrared total and diffuse directional - hemispherical reflectance measurements using an integrating sphere. We have found that reflectance spectra of solids, especially powders, are influenced by a number of factors including the sample preparation method, the particle size and morphology, as well as the sample origin. On a quantitative basis we have investigated some of these parameters and the effects they have on reflectance spectra, particularly in the longwave infrared. In the IR the spectral features may be observed as either maxima or minima: In general, upward-going peaks in the reflectance spectrum result from strong surface scattering, i.e. rays that are reflected from the surface without bulk penetration, whereas downward-going peaks are due to either absorption or volume scattering, i.e. rays that have penetrated or refracted into the sample interior and are not reflected. The light signals reflected from solids usually encompass all such effects, but with strong dependencies on particle size and preparation. This paper measures the reflectance spectra in the 1.3 – 16 micron range for various bulk materials that have a combination of strong and weak absorption bands in order to observe the effects on the spectral features: Bulk materials were ground with a mortar and pestle and sieved to separate the samples into various size fractions between 5 and 500 microns. The median particle size is demonstrated to have large effects on the reflectance spectra. For certain minerals we also observe significant spectral change depending on the geologic origin of the sample. All three such effects (particle size, preparation and provenance) result in substantial change in the reflectance spectra for solid materials; successful identification algorithms will require sufficient flexibility to account for these parameters.

  17. Provenance of Mesozoic Sandstones in the Banda Arc, Indonesia

    NASA Astrophysics Data System (ADS)

    Zimmermann, S.; Hall, R.

    2014-12-01

    Quartz-rich sandstones in the Banda Arc islands of Tanimbar, Babar, Timor and Sumba are equivalent of Mesozoic sandstones on the Australian margin where they are important hydrocarbon reservoirs. They have been exposed by on-going collision providing an opportunity to study their provenance. Previous studies suggested that rivers draining Australia provided most input. New light mineral, heavy mineral and detrital zircon data provide information on sources of sediments and constraints on palaeogeographic models. Conventional light mineral plots of sandstones from the islands typically show a recycled orogen and continental block origin, consistent with an Australian source. However many of the sandstones are texturally immature. Many samples also contain volcanic quartz and volcanic lithic fragments. Heavy mineral assemblages of most samples contain material from acid igneous and metamorphic rocks, with few indications of mafic or ultramafic sources. Rounded ultrastable minerals are typical, but these are commonly mixed with angular grains. Detrital zircon (LA-ICP-MS) U-Pb ages range from Archean to Mesozoic, but variations in age populations indicate differences in source areas along the Banda Arc in locality and time. We recognise distinctive Permo-Triassic, older Palaeozoic and Proterozoic ages characteristic of a Bird's Head, New Guinea, acid igneous source and this component diminishes from east to west. On Tanimbar and Babar, sediment came from both Australia and the Bird's Head. Sandstones in Timor have immature textures and show differences from east to west. They contain zircons derived from the Birds Head, as well as Precambrian zircons suggesting a northern Australian origin. In contrast, immature textures, heavy minerals and Cretaceous zircon ages in rocks from Sumba suggest that they were mainly derived from metamorphic sources. Mesozoic to Archean zircons indicate derivation from Australian crust that had collided in Sulawesi during the Cretaceous.

  18. Provenance control on chemical indices of weathering (Taiwan river sands)

    NASA Astrophysics Data System (ADS)

    Garzanti, Eduardo; Resentini, Alberto

    2016-05-01

    Geochemical parameters obtained from the analysis of sediments and sedimentary rocks are widely used to infer weathering and paleo-weathering conditions in source areas. Chemical indices of weathering, however, may not reflect weathering only, or even principally. The concentration of chemical elements in terrigenous sediments is constrained by the original mineralogy of source rocks, and is thus provenance-dependent. Moreover, the mineralogy and consequently the geochemistry of sediments may undergo substantial modifications by diverse physical processes during transport and deposition, including recycling and hydraulic sorting by size, density or shape, and/or by chemical dissolution and precipitation during diagenesis. Around the island of Taiwan, temperature and rainfall are consistently high and relatively homogeneous, and no significant correlation is observed between geochemical and climatic parameters. Physical erosion, fostered by landslides induced by frequent earthquakes and typhoons, prevails because of high relief and extreme rates of tectonic uplift. In such a dynamic orogenic setting, all chemical indices of weathering are controlled principally by the geology of source terranes. Sedimentaclastic and metasedimentaclastic sands carried by western Taiwan rivers draining the pro-wedge display the strongest depletion in Na, Ca, Mg and Sr relative to average upper continental crust, and no depletion or even enrichment in K, Rb and Ba. Low WIP indices reflect erosion of phyllosilicate-dominated rocks in the Slate Belt and extensive recycling of clastic rocks exposed in the Western Foothills. Instead, metamorphiclastic sands carried by eastern Taiwan rivers draining the retro-wedge show no depletion or even enrichment in Mg and Ca, and low CIA and PIA, reflecting contributions from the Tailuko Belt and Coastal Range. Volcaniclastic sands have the same CIA values of their andesitic source rocks (47 ± 1 versus 47 ± 7), indicating that weathering is

  19. Geisinger's ProvenCare methodology: driving performance improvement within a shared governance structure.

    PubMed

    Nolan, Ruth; Wary, Andrea; King, Megan; Laam, Leslie A; Hallick, Susan

    2011-05-01

    Many performance improvement projects fail because they occur in parallel to the organization's shared governance structure. Leveraging the full potential of its nursing shared governance structure, Geisinger Health System's ProvenCare methodology harnessed the full potential of its staff nurses to create truly reliable workflows that benefit patients and that the team finds professionally satisfying. Using ProvenCare Perinatal and its smoking cessation education intervention and outcomes as an example, the authors describe the ProvenCare methodology.

  20. [Root architecture and phosphorus efficiency of different provenance Pinus massoniana under low phosphorous stress].

    PubMed

    Yang, Qing; Zhang, Yi; Zhou, Zhi-Chun; Feng, Zhong-Ping

    2012-09-01

    Taking four representative provenances of Pinus massoniana from Chun' an of Zhejiang, Wuping of Fujian, Cenxi of Guangxi, and Xinyi of Guangdong in East and South China as test materials, a pot experiment was conducted to study their variations in root architecture and phosphorus (P) efficiency under heterogeneous and homogeneous low P stress. Large variations were detected in the major growth traits and the indices of P efficiency among the P. massoniana provenances under both heterogeneous and homogeneous low P stress. Under heterogeneous low P stress, the provenances from Xinyi of Guangdong and Wuping of Fujian exhibited higher P efficiency and greater dry matter accumulation, and their root architecture presented large adaptive changes, with the values of root parameters in P-rich soil surface layer being significantly higher than those of the P inefficient provenances from Chun'an of Zhejiang and Cenxi of Guangxi, which should be responsible for the higher P absorption efficiency and high P efficiency of the provenances from Xinyi and Wuping under heterogeneous low P condition. The root architecture parameters in P-rich soil surface layer and the plant dry matter accumulation of different provenance P. massoniana under heterogeneous low P stress had a correlation coefficient >0.95. Under homogeneous low P stress, the provenances with higher P efficiency had a significantly higher P uptake efficiency than the provenances with lower P efficiency, but the root parametres of the provenances with higher P efficiency had no significant correlation with the P efficiency of the provenances. There existed differences in the adaptive mechanism for the heterogeneous and homogeneous low P stress among the the P. massoniana provenances, and thus, different strategies should be adopted in the selection of P-efficient provenances for different forest stands.

  1. Geisinger's ProvenCare methodology: driving performance improvement within a shared governance structure.

    PubMed

    Nolan, Ruth; Wary, Andrea; King, Megan; Laam, Leslie A; Hallick, Susan

    2011-05-01

    Many performance improvement projects fail because they occur in parallel to the organization's shared governance structure. Leveraging the full potential of its nursing shared governance structure, Geisinger Health System's ProvenCare methodology harnessed the full potential of its staff nurses to create truly reliable workflows that benefit patients and that the team finds professionally satisfying. Using ProvenCare Perinatal and its smoking cessation education intervention and outcomes as an example, the authors describe the ProvenCare methodology. PMID:21519209

  2. Wood structural differences between northern and southern beech provenances growing at a moderate site.

    PubMed

    Eilmann, B; Sterck, F; Wegner, L; de Vries, S M G; von Arx, G; Mohren, G M J; den Ouden, J; Sass-Klaassen, U

    2014-08-01

    Planting provenances originating from southern to northern locations has been discussed as a strategy to speed up species migration and mitigate negative effects of climate change on forest stability and productivity. Especially for drought-susceptible species such as European beech (Fagus sylvatica L.), the introduction of drought-tolerant provenances from the south could be an option. Yet, beech has been found to respond plastically to environmental conditions, suggesting that the climate on the plantation site might be more important for tree growth than the genetic predisposition of potentially drought-adapted provenances. In this study, we compared the radial growth, wood-anatomical traits and leaf phenology of four beech provenances originating from southern (Bulgaria, France) and northern locations (Sweden, the Netherlands) and planted in a provenance trial in the Netherlands. The distribution of precipitation largely differs between the sites of origin. The northern provenances experience a maximum and the southern provenances experience a minimum of rainfall in summer. We compared tree productivity and the anatomy of the water-conducting system for the period from 2000 to 2010, including the drought year 2003. In addition, tree mortality and the timing of leaf unfolding in spring were analysed for the years 2001, 2007 and 2012. Comparison of these traits in the four beech provenances indicates the influence of genetic predisposition and local environmental factors on the performance of these provenances under moderate site conditions. Variation in radial growth was controlled by environment, although the growth level slightly differed due to genetic background. The Bulgarian provenance had an efficient water-conducting system which was moreover unaffected by the drought in 2003, pointing to a high ability of this provenance to cope well with dry conditions. In addition, the Bulgarian provenance showed up as most productive in terms of height and radial

  3. Wood structural differences between northern and southern beech provenances growing at a moderate site.

    PubMed

    Eilmann, B; Sterck, F; Wegner, L; de Vries, S M G; von Arx, G; Mohren, G M J; den Ouden, J; Sass-Klaassen, U

    2014-08-01

    Planting provenances originating from southern to northern locations has been discussed as a strategy to speed up species migration and mitigate negative effects of climate change on forest stability and productivity. Especially for drought-susceptible species such as European beech (Fagus sylvatica L.), the introduction of drought-tolerant provenances from the south could be an option. Yet, beech has been found to respond plastically to environmental conditions, suggesting that the climate on the plantation site might be more important for tree growth than the genetic predisposition of potentially drought-adapted provenances. In this study, we compared the radial growth, wood-anatomical traits and leaf phenology of four beech provenances originating from southern (Bulgaria, France) and northern locations (Sweden, the Netherlands) and planted in a provenance trial in the Netherlands. The distribution of precipitation largely differs between the sites of origin. The northern provenances experience a maximum and the southern provenances experience a minimum of rainfall in summer. We compared tree productivity and the anatomy of the water-conducting system for the period from 2000 to 2010, including the drought year 2003. In addition, tree mortality and the timing of leaf unfolding in spring were analysed for the years 2001, 2007 and 2012. Comparison of these traits in the four beech provenances indicates the influence of genetic predisposition and local environmental factors on the performance of these provenances under moderate site conditions. Variation in radial growth was controlled by environment, although the growth level slightly differed due to genetic background. The Bulgarian provenance had an efficient water-conducting system which was moreover unaffected by the drought in 2003, pointing to a high ability of this provenance to cope well with dry conditions. In addition, the Bulgarian provenance showed up as most productive in terms of height and radial

  4. Volatile organic compounds emitted from silver birch of different provenances across a latitudinal gradient in Finland.

    PubMed

    Maja, Mengistu M; Kasurinen, Anne; Holopainen, Toini; Kontunen-Soppela, Sari; Oksanen, Elina; Holopainen, Jarmo K

    2015-09-01

    Climate warming is having an impact on distribution, acclimation and defence capability of plants. We compared the emission rate and composition of volatile organic compounds (VOCs) from silver birch (Betula pendula (Roth)) provenances along a latitudinal gradient in a common garden experiment over the years 2012 and 2013. Micropropagated silver birch saplings from three provenances were acquired along a gradient of 7° latitude and planted at central (Joensuu 62°N) and northern (Kolari 67°N) sites. We collected VOCs emitted by shoots and assessed levels of herbivore damage of three genotypes of each provenance on three occasions at the central site and four occasions at the northern site. In 2012, trees of all provenances growing at the central site had higher total VOC emission rates than the same provenances growing at the northern site; in 2013 the reverse was true, thus indicating a variable effect of latitude. Trees of the southern provenance had lower VOC emission rates than trees of the central and northern provenances during both sampling years. However, northward or southward translocation itself had no significant effect on the total VOC emission rates, and no clear effect on insect herbivore damage. When VOC blend composition was studied, trees of all provenances usually emitted more green leaf volatiles at the northern site and more sesquiterpenes at the central site. The monoterpene composition of emissions from trees of the central provenance was distinct from that of the other provenances. In summary, provenance translocation did not have a clear effect in the short-term on VOC emissions and herbivory was not usually intense at the lower latitude. Our data did not support the hypothesis that trees growing at lower latitudes would experience more intense herbivory, and therefore allocate resources to chemical defence in the form of inducible VOC emissions. PMID:26093370

  5. Lowering the Barrier to Reproducible Research by Publishing Provenance from Common Analytical Tools

    NASA Astrophysics Data System (ADS)

    Jones, M. B.; Slaughter, P.; Walker, L.; Jones, C. S.; Missier, P.; Ludäscher, B.; Cao, Y.; McPhillips, T.; Schildhauer, M.

    2015-12-01

    Scientific provenance describes the authenticity, origin, and processing history of research products and promotes scientific transparency by detailing the steps in computational workflows that produce derived products. These products include papers, findings, input data, software products to perform computations, and derived data and visualizations. The geosciences community values this type of information, and, at least theoretically, strives to base conclusions on computationally replicable findings. In practice, capturing detailed provenance is laborious and thus has been a low priority; beyond a lab notebook describing methods and results, few researchers capture and preserve detailed records of scientific provenance. We have built tools for capturing and publishing provenance that integrate into analytical environments that are in widespread use by geoscientists (R and Matlab). These tools lower the barrier to provenance generation by automating capture of critical information as researchers prepare data for analysis, develop, test, and execute models, and create visualizations. The 'recordr' library in R and the `matlab-dataone` library in Matlab provide shared functions to capture provenance with minimal changes to normal working procedures. Researchers can capture both scripted and interactive sessions, tag and manage these executions as they iterate over analyses, and then prune and publish provenance metadata and derived products to the DataONE federation of archival repositories. Provenance traces conform to the ProvONE model extension of W3C PROV, enabling interoperability across tools and languages. The capture system supports fine-grained versioning of science products and provenance traces. By assigning global identifiers such as DOIs, reseachers can cite the computational processes used to reach findings. And, finally, DataONE has built a web portal to search, browse, and clearly display provenance relationships between input data, the software

  6. Volatile organic compounds emitted from silver birch of different provenances across a latitudinal gradient in Finland.

    PubMed

    Maja, Mengistu M; Kasurinen, Anne; Holopainen, Toini; Kontunen-Soppela, Sari; Oksanen, Elina; Holopainen, Jarmo K

    2015-09-01

    Climate warming is having an impact on distribution, acclimation and defence capability of plants. We compared the emission rate and composition of volatile organic compounds (VOCs) from silver birch (Betula pendula (Roth)) provenances along a latitudinal gradient in a common garden experiment over the years 2012 and 2013. Micropropagated silver birch saplings from three provenances were acquired along a gradient of 7° latitude and planted at central (Joensuu 62°N) and northern (Kolari 67°N) sites. We collected VOCs emitted by shoots and assessed levels of herbivore damage of three genotypes of each provenance on three occasions at the central site and four occasions at the northern site. In 2012, trees of all provenances growing at the central site had higher total VOC emission rates than the same provenances growing at the northern site; in 2013 the reverse was true, thus indicating a variable effect of latitude. Trees of the southern provenance had lower VOC emission rates than trees of the central and northern provenances during both sampling years. However, northward or southward translocation itself had no significant effect on the total VOC emission rates, and no clear effect on insect herbivore damage. When VOC blend composition was studied, trees of all provenances usually emitted more green leaf volatiles at the northern site and more sesquiterpenes at the central site. The monoterpene composition of emissions from trees of the central provenance was distinct from that of the other provenances. In summary, provenance translocation did not have a clear effect in the short-term on VOC emissions and herbivory was not usually intense at the lower latitude. Our data did not support the hypothesis that trees growing at lower latitudes would experience more intense herbivory, and therefore allocate resources to chemical defence in the form of inducible VOC emissions.

  7. Multi-scale Science: Supporting Emerging Practice with Semantically Derived Provenance

    SciTech Connect

    Myers, James D.; Pancerella, Carmen M.; Lansing, Carina S.; Schuchardt, Karen L.; Didier, Brett T.; Ashish, N., Goble, C

    2003-10-20

    Scientific progress is becoming increasingly dependent of our ability to study phenomena at multiple scales and from multiple perspectives. The ability to recontextualize third party data within the semantic and syntactic framework of a given research project is increasingly seen as a primary barrier in multi-scale science. Within the Collaboratory for Multiscale Chemical Science (CMCS) project, we are developing a general-purpose informatics-based approach that emphasizes ''on-demand'' metadata creation, configurable data translations, and semantic mapping to support the rapidly increasing and continually evolving requirements for managing data, metadata, and data relationships in such projects. A concrete example of this approach is the design of the CMCS provenance subsystem. The concept of provenance varies across communities, and multiple independent applications contribute to and use provenance. In CMCS, we have developed generic tools for viewing provenance relationships and for using them to, for example, scope notifications and searches. These tools rely on a configurable concept of provenance defined in terms of other relationships. The result is a very flexible mechanism capable of tracking data provenance across many disciplines and supporting multiple uses of provenance information.

  8. Applying the Karma Provenance tool to NASA's AMSR-E Data Production Stream

    NASA Astrophysics Data System (ADS)

    Ramachandran, R.; Conover, H.; Regner, K.; Movva, S.; Goodman, H. M.; Pale, B.; Purohit, P.; Sun, Y.

    2010-12-01

    Current procedures for capturing and disseminating provenance, or data product lineage, are limited in both what is captured and how it is disseminated to the science community. For example, the Advanced Microwave Scanning Radiometer for the Earth Observing System (AMSR-E) Science Investigator-led Processing System (SIPS) generates Level 2 and Level 3 data products for a variety of geophysical parameters. Data provenance and quality information for these data sets is either very general (e.g., user guides, a list of anomalous data receipt and processing conditions over the life of the missions) or difficult to access or interpret (e.g., quality flags embedded in the data, production history files not easily available to users). Karma is a provenance collection and representation tool designed and developed for data driven workflows such as the productions streams used to produce EOS standard products. Karma records uniform and usable provenance metadata independent of the processing system while minimizing both the modification burden on the processing system and the overall performance overhead. Karma collects both the process and data provenance. The process provenance contains information about the workflow execution and the associated algorithm invocations. The data provenance captures metadata about the derivation history of the data product, including algorithms used and input data sources transformed to generate it. As part of an ongoing NASA funded project, Karma is being integrated into the AMSR-E SIPS data production streams. Metadata gathered by the tool will be presented to the data consumers as provenance graphs, which are useful in validating the workflows and determining the quality of the data product. This presentation will discuss design and implementation issues faced while incorporating a provenance tool into a structured data production flow. Prototype results will also be presented in this talk.

  9. Diverging Drought Resistance of Scots Pine Provenances Revealed by Infrared Thermography.

    PubMed

    Seidel, Hannes; Schunk, Christian; Matiu, Michael; Menzel, Annette

    2016-01-01

    With recent climate changes, Scots pine (Pinus sylvestris L.) forests have been affected by die-off events. Assisted migration of adapted provenances mitigates drought impacts and promotes forest regeneration. Although suitable provenances are difficult to identify by traditional ecophysiological techniques, which are time consuming and invasive, plant water status can be easily assessed by infrared thermography. Thus, we examined the stress responses of 2-year-old potted Scots pine seedlings from six provenances (Bulgaria, France, Germany, Italy, Poland, and Spain) based on two thermal indices (crop water stress index and stomatal conductance index). Both indices were derived from infrared images during a 6-week drought/control treatment in a greenhouse in the summer of 2013. The pines were monitored during the stress and subsequent recovery period. After controlling for fluctuating environmental conditions, soil moisture or treatment-specific water supply was the most important driver of drought stress. The stress magnitude and response to soil water deficit depended on provenance. Under moderate drought conditions, pines from western and eastern Mediterranean provenances (Bulgaria, France, and Spain) expressed lower stress levels than those from both continental provenances (Germany and Poland). Moreover, pines from continental provenances were less resilient (showed less recovery after the stress period) than Mediterranean pines. Under extreme drought, all provenances were equally stressed with almost no significant differences in their thermal indices. Provenance-specific differences in drought resistance, which are associated with factors such as summer precipitation at the origin of Scots pine seedlings, may offer promising tracks of adaptation to future drought risks. PMID:27630643

  10. Diverging Drought Resistance of Scots Pine Provenances Revealed by Infrared Thermography

    PubMed Central

    Seidel, Hannes; Schunk, Christian; Matiu, Michael; Menzel, Annette

    2016-01-01

    With recent climate changes, Scots pine (Pinus sylvestris L.) forests have been affected by die-off events. Assisted migration of adapted provenances mitigates drought impacts and promotes forest regeneration. Although suitable provenances are difficult to identify by traditional ecophysiological techniques, which are time consuming and invasive, plant water status can be easily assessed by infrared thermography. Thus, we examined the stress responses of 2-year-old potted Scots pine seedlings from six provenances (Bulgaria, France, Germany, Italy, Poland, and Spain) based on two thermal indices (crop water stress index and stomatal conductance index). Both indices were derived from infrared images during a 6-week drought/control treatment in a greenhouse in the summer of 2013. The pines were monitored during the stress and subsequent recovery period. After controlling for fluctuating environmental conditions, soil moisture or treatment-specific water supply was the most important driver of drought stress. The stress magnitude and response to soil water deficit depended on provenance. Under moderate drought conditions, pines from western and eastern Mediterranean provenances (Bulgaria, France, and Spain) expressed lower stress levels than those from both continental provenances (Germany and Poland). Moreover, pines from continental provenances were less resilient (showed less recovery after the stress period) than Mediterranean pines. Under extreme drought, all provenances were equally stressed with almost no significant differences in their thermal indices. Provenance-specific differences in drought resistance, which are associated with factors such as summer precipitation at the origin of Scots pine seedlings, may offer promising tracks of adaptation to future drought risks.

  11. Diverging Drought Resistance of Scots Pine Provenances Revealed by Infrared Thermography

    PubMed Central

    Seidel, Hannes; Schunk, Christian; Matiu, Michael; Menzel, Annette

    2016-01-01

    With recent climate changes, Scots pine (Pinus sylvestris L.) forests have been affected by die-off events. Assisted migration of adapted provenances mitigates drought impacts and promotes forest regeneration. Although suitable provenances are difficult to identify by traditional ecophysiological techniques, which are time consuming and invasive, plant water status can be easily assessed by infrared thermography. Thus, we examined the stress responses of 2-year-old potted Scots pine seedlings from six provenances (Bulgaria, France, Germany, Italy, Poland, and Spain) based on two thermal indices (crop water stress index and stomatal conductance index). Both indices were derived from infrared images during a 6-week drought/control treatment in a greenhouse in the summer of 2013. The pines were monitored during the stress and subsequent recovery period. After controlling for fluctuating environmental conditions, soil moisture or treatment-specific water supply was the most important driver of drought stress. The stress magnitude and response to soil water deficit depended on provenance. Under moderate drought conditions, pines from western and eastern Mediterranean provenances (Bulgaria, France, and Spain) expressed lower stress levels than those from both continental provenances (Germany and Poland). Moreover, pines from continental provenances were less resilient (showed less recovery after the stress period) than Mediterranean pines. Under extreme drought, all provenances were equally stressed with almost no significant differences in their thermal indices. Provenance-specific differences in drought resistance, which are associated with factors such as summer precipitation at the origin of Scots pine seedlings, may offer promising tracks of adaptation to future drought risks. PMID:27630643

  12. Defining the "proven technology" technical criterion in the reactor technology assessment for Malaysia's nuclear power program

    NASA Astrophysics Data System (ADS)

    Anuar, Nuraslinda; Kahar, Wan Shakirah Wan Abdul; Manan, Jamal Abdul Nasir Abd

    2015-04-01

    Developing countries that are considering the deployment of nuclear power plants (NPPs) in the near future need to perform reactor technology assessment (RTA) in order to select the most suitable reactor design. The International Atomic Energy Agency (IAEA) reported in the Common User Considerations (CUC) document that "proven technology" is one of the most important technical criteria for newcomer countries in performing the RTA. The qualitative description of five desired features for "proven technology" is relatively broad and only provides a general guideline to its characterization. This paper proposes a methodology to define the "proven technology" term according to a specific country's requirements using a three-stage evaluation process. The first evaluation stage screens the available technologies in the market against a predefined minimum Technology Readiness Level (TRL) derived as a condition based on national needs and policy objectives. The result is a list of technology options, which are then assessed in the second evaluation stage against quantitative definitions of CUC desired features for proven technology. The potential technology candidates produced from this evaluation is further narrowed down to obtain a list of proven technology candidates by assessing them against selected risk criteria and the established maximum allowable total score using a scoring matrix. The outcome of this methodology is the proven technology candidates selected using an accurate definition of "proven technology" that fulfills the policy objectives, national needs and risk, and country-specific CUC desired features of the country that performs this assessment. A simplified assessment for Malaysia is carried out to demonstrate and suggest the use of the proposed methodology. In this exercise, ABWR, AP1000, APR1400 and EPR designs assumed the top-ranks of proven technology candidates according to Malaysia's definition of "proven technology".

  13. Diverging Drought Resistance of Scots Pine Provenances Revealed by Infrared Thermography.

    PubMed

    Seidel, Hannes; Schunk, Christian; Matiu, Michael; Menzel, Annette

    2016-01-01

    With recent climate changes, Scots pine (Pinus sylvestris L.) forests have been affected by die-off events. Assisted migration of adapted provenances mitigates drought impacts and promotes forest regeneration. Although suitable provenances are difficult to identify by traditional ecophysiological techniques, which are time consuming and invasive, plant water status can be easily assessed by infrared thermography. Thus, we examined the stress responses of 2-year-old potted Scots pine seedlings from six provenances (Bulgaria, France, Germany, Italy, Poland, and Spain) based on two thermal indices (crop water stress index and stomatal conductance index). Both indices were derived from infrared images during a 6-week drought/control treatment in a greenhouse in the summer of 2013. The pines were monitored during the stress and subsequent recovery period. After controlling for fluctuating environmental conditions, soil moisture or treatment-specific water supply was the most important driver of drought stress. The stress magnitude and response to soil water deficit depended on provenance. Under moderate drought conditions, pines from western and eastern Mediterranean provenances (Bulgaria, France, and Spain) expressed lower stress levels than those from both continental provenances (Germany and Poland). Moreover, pines from continental provenances were less resilient (showed less recovery after the stress period) than Mediterranean pines. Under extreme drought, all provenances were equally stressed with almost no significant differences in their thermal indices. Provenance-specific differences in drought resistance, which are associated with factors such as summer precipitation at the origin of Scots pine seedlings, may offer promising tracks of adaptation to future drought risks.

  14. Diverging drought resistance of Scots pine provenances revealed by infrared thermography and mortality

    NASA Astrophysics Data System (ADS)

    Seidel, Hannes; Schunk, Christian; Matiu, Michael; Menzel, Annette

    2016-04-01

    Climate warming and more frequent and severe drought events will alter the adaptedness and fitness of tree species. Especially, Scots pine forests have been affected above average by die-off events during the last decades. Assisted migration of adapted provenances might help alleviating impacts by recent climate change and successfully regenerating forests. However, the identification of suitable provenances based on established ecophysiological methods is time consuming, sometimes invasive, and data on provenance-specific mortality are lacking. We studied the performance, stress and survival of potted Scots pine seedlings from 12 European provenances grown in a greenhouse experiment with multiple drought and warming treatments. In this paper, we will present results of drought stress impacts monitored with four different thermal indices derived from infrared thermography imaging as well as an ample mortality study. Percent soil water deficit (PSWD) was shown to be the main driver of drought stress response in all thermal indices. In spite of wet and dry reference surfaces, however, fluctuating environmental conditions, mainly in terms of air temperature and humidity, altered the measured stress response. In linear mixed-effects models, besides PSWD and meteorological covariates, the factors provenance and provenance - PSWD interactions were included. The explanatory power of the models (R2) ranged between 0.51 to 0.83 and thus, provenance-specific responses to strong and moderate drought and subsequent recovery were revealed. However, obvious differences in the response magnitude of provenances to drought were difficult to explicitly link to general features such Mediterranean - continental type or climate at the provenances' origin. We conclude that seedlings' drought resistance may be linked to summer precipitation and their experienced stress levels are a.o. dependent on their above ground dimensions under given water supply. In respect to mortality, previous

  15. 77 FR 57637 - Culturally Significant Objects Imported for Exhibition Determinations: “The Place of Provenance...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-09-18

    ... Styles in Tibetan Painting'' SUMMARY: Notice is hereby given of the following determinations: Pursuant to... the exhibition ``The Place of Provenance--Regional Styles in Tibetan Painting,'' imported from...

  16. Leveraging The Open Provenance Model as a Multi-Tier Model for Global Climate Research

    SciTech Connect

    Stephan, Eric G.; Halter, Todd D.; Ermold, Brian D.

    2010-12-08

    Global climate researchers rely upon many forms of sensor data and analytical methods to help profile subtle changes in climate conditions. The U.S. Department of Energy's Atmospheric Radiation Measurement (ARM) program provides researchers with curated Value Added Products (VAPs) resulting from continuous sensor data streams, data fusion, and modeling. The ARM operations staff and software development teams (data producers) rely upon a number of techniques to ensure strict quality control (QC) and quality assurance (QA) standards are maintained. Climate researchers (data consumers) are highly interested in obtaining as much provenance (data quality, data pedigree) as possible to establish data trustworthiness. Currently all the provenance is not easily attainable or identifiable without significant efforts to extract and piece together information from configuration files, log files, codes, and status information from ARM databases. The need for a formalized approach to managing provenance became paramount with the planned addition of 120 new instruments, new data products, and data collection scaling to half a terabyte daily. Last year our research identified the need for a multi-tier provenance model to enable the data consumer easy access to the provenance for their data. This year we are leveraging the Open Provenance Model as a foundational construct that serves the needs of both the VAP producers and consumers, we are organizing the provenance in different tiers of granularity to model VAP lineage, causality at the component level within a VAP, and the causality for each time step as samples are being assembled within the VAP. This paper shares our implementation strategy and how the ARM operations staff and the climate research community can greatly benefit from this approach to more effectively assess and quantify VAP provenance.

  17. The concentration of ascorbic acid and glutathione in 13 provenances of Acacia melanoxylon.

    PubMed

    Wujeska-Klause, Agnieszka; Bossinger, Gerd; Tausz, Michael

    2016-04-01

    Climate change can negatively affect sensitive tree species, affecting their acclimation and adaptation strategies. A common garden experiment provides an opportunity to test whether responses of trees from different provenances are genetically driven and if this response is related to factors at the site of origin. We hypothesized that antioxidative defence systems and leaf mass area ofAcacia melanoxylonR. Br. samples collected from different provenances will vary depending on local rainfall. Thirteen provenances ofA. melanoxylonoriginating from different rainfall habitats (500-2000 mm) were grown for 5 years in a common garden. For 2 years, phyllode samples were collected during winter and summer, for measurements of leaf mass area and concentrations of glutathione and ascorbic acid. Leaf mass area varied between seasons, years and provenances ofA. melanoxylon, and an increase was associated with decreasing rainfall at the site of origin. Ascorbic acid and glutathione concentrations varied between seasons, years (i.e., environmental factors) and among provenances ofA. melanoxylon In general, glutathione and ascorbic acid concentrations were higher in winter compared with summer. Ascorbic acid and glutathione were different among provenances, but this was not associated with rainfall at the site of origin. PMID:26960387

  18. Persistent identifiers for web service requests relying on a provenance ontology design pattern

    NASA Astrophysics Data System (ADS)

    Car, Nicholas; Wang, Jingbo; Wyborn, Lesley; Si, Wei

    2016-04-01

    Delivering provenance information for datasets produced from static inputs is relatively straightforward: we represent the processing actions and data flow using provenance ontologies and link to stored copies of the inputs stored in repositories. If appropriate detail is given, the provenance information can then describe what actions have occurred (transparency) and enable reproducibility. When web service-generated data is used by a process to create a dataset instead of a static inputs, we need to use sophisticated provenance representations of the web service request as we can no longer just link to data stored in a repository. A graph-based provenance representation, such as the W3C's PROV standard, can be used to model the web service request as a single conceptual dataset and also as a small workflow with a number of components within the same provenance report. This dual representation does more than just allow simplified or detailed views of a dataset's production to be used where appropriate. It also allow persistent identifiers to be assigned to instances of a web service requests, thus enabling one form of dynamic data citation, and for those identifiers to resolve to whatever level of detail implementers think appropriate in order for that web service request to be reproduced. In this presentation we detail our reasoning in representing web service requests as small workflows. In outline, this stems from the idea that web service requests are perdurant things and in order to most easily persist knowledge of them for provenance, we should represent them as a nexus of relationships between endurant things, such as datasets and knowledge of particular system types, as these endurant things are far easier to persist. We also describe the ontology design pattern that we use to represent workflows in general and how we apply it to different types of web service requests. We give examples of specific web service requests instances that were made by systems

  19. Nitrogen partitioning in oak leaves depends on species, provenance, climate conditions and soil type.

    PubMed

    Hu, B; Simon, J; Kuster, T M; Arend, M; Siegwolf, R; Rennenberg, H

    2013-01-01

    Climate-tolerant tree species and/or provenances have to be selected to ensure the high productivity of managed forests in Central Europe under the prognosticated climate changes. For this purpose, we studied the responses of saplings from three oak species (i.e. Quercus robur, Q. petraea and Q. pubescens) and provenances of different climatic origin (i.e. low or high rainfall, low or high temperature habitats) with regard to leaf nitrogen (N) composition as a measure of N nutrition. Saplings were grown in model ecosystems on either calcareous or acidic soil and subjected to one of four treatments (control, drought, air warming or a combination of drought and air warming). Across species, oak N metabolism responded to the influence of drought and/or air warming with an increase in leaf amino acid N concentration at the expense of structural N. Moreover, provenances or species from drier habitats were more tolerant to the climate conditions applied, as indicated by an increase in amino acid N (comparing species) or soluble protein N (comparing provenances within a species). Furthermore, amino acid N concentrations of oak leaves were significantly higher on calcareous compared to acidic soil. From these results, it can be concluded that seeds from provenances or species originating from drier habitats and - if available - from calcareous soil types may provide a superior seed source for future forest establishment. PMID:22934888

  20. Nitrogen partitioning in oak leaves depends on species, provenance, climate conditions and soil type.

    PubMed

    Hu, B; Simon, J; Kuster, T M; Arend, M; Siegwolf, R; Rennenberg, H

    2013-01-01

    Climate-tolerant tree species and/or provenances have to be selected to ensure the high productivity of managed forests in Central Europe under the prognosticated climate changes. For this purpose, we studied the responses of saplings from three oak species (i.e. Quercus robur, Q. petraea and Q. pubescens) and provenances of different climatic origin (i.e. low or high rainfall, low or high temperature habitats) with regard to leaf nitrogen (N) composition as a measure of N nutrition. Saplings were grown in model ecosystems on either calcareous or acidic soil and subjected to one of four treatments (control, drought, air warming or a combination of drought and air warming). Across species, oak N metabolism responded to the influence of drought and/or air warming with an increase in leaf amino acid N concentration at the expense of structural N. Moreover, provenances or species from drier habitats were more tolerant to the climate conditions applied, as indicated by an increase in amino acid N (comparing species) or soluble protein N (comparing provenances within a species). Furthermore, amino acid N concentrations of oak leaves were significantly higher on calcareous compared to acidic soil. From these results, it can be concluded that seeds from provenances or species originating from drier habitats and - if available - from calcareous soil types may provide a superior seed source for future forest establishment.

  1. Use of provenance tests to predict response to climate change: loblolly pine and Norway spruce.

    PubMed

    Schmidtling, R. C.

    1994-01-01

    Provenance tests are often used to determine genetic responses of seed sources to transfer to different climates. This study was undertaken to determine whether provenance tests can be used to predict tree response to rapid climate changes in situ. Data from provenance tests of loblolly pines (Pinus taeda L.), Norway spruce (Picea abies L. Karst) and other southern pines (subsect. AUSTRALES Loud.) were interpreted using regression models to relate growth to temperature variables. Results of different plantings were combined by expressing growth as a percent deviation from the "local" source, and expressing temperature at the source as a deviation from that of the planting site. The results of the loblolly pine and Norway spruce models predicted a loss of about 5 to 10% in height growth below that expected for a genetically adapted seed source, if the average yearly temperature increases by 4 degrees C. PMID:14967650

  2. Use of laser induced breakdown spectroscopy in the determination of gem provenance: beryls.

    PubMed

    McManus, Catherine E; McMillan, Nancy J; Harmon, Russell S; Whitmore, Robert C; De Lucia, Frank C; Miziolek, Andrzej W

    2008-11-01

    The provenance of gem stones has been of interest to geologists, gemologists, archeologists, and historians for centuries. Laser induced breakdown spectroscopy (LIBS) provides a minimally destructive tool for recording the rich chemical signatures of gem beryls (aquamarine, goshenite, heliodor, and morganite). Broadband LIBS spectra of 39 beryl (Be(3)Al(2)Si(6)O(18)) specimens from 11 pegmatite mines in New Hampshire, Connecticut, and Maine (USA) are used to assess the potential of using principal component analysis of LIBS spectra to determine specimen provenance. Using this technique, beryls from the three beryl-bearing zones in the Palermo #1 pegmatite (New Hampshire) can be recognized. However, the compositional variation within this single mine is comparable to that in beryls from all three states. Thus, a very large database with detailed location metadata will be required to routinely determine gem beryl provenance.

  3. Use of laser induced breakdown spectroscopy in the determination of gem provenance: beryls

    SciTech Connect

    McManus, Catherine E.; McMillan, Nancy J.; Harmon, Russell S.; Whitmore, Robert C.; De Lucia, Frank C. Jr.; Miziolek, Andrzej W

    2008-11-01

    The provenance of gem stones has been of interest to geologists, gemologists, archeologists, and historians for centuries. Laser induced breakdown spectroscopy (LIBS) provides a minimally destructive tool for recording the rich chemical signatures of gem beryls (aquamarine, goshenite, heliodor, and morganite). Broadband LIBS spectra of 39 beryl (Be3Al2Si6O18) specimens from 11 pegmatite mines in New Hampshire, Connecticut, and Maine (USA) are used to assess the potential of using principal component analysis of LIBS spectra to determine specimen provenance. Using this technique, beryls from the three beryl-bearing zones in the Palermo no. 1 pegmatite (New Hampshire) can be recognized. However, the compositional variation within this single mine is comparable to that in beryls from all three states. Thus, a very large database with detailed location metadata will be required to routinely determine gem beryl provenance.

  4. Provenance of surface sediments along the southeastern Adriatic coast off Italy: An overview

    NASA Astrophysics Data System (ADS)

    Goudeau, Marie-Louise S.; Grauel, Anna-Lena; Bernasconi, Stefano M.; de Lange, Gert J.

    2013-12-01

    Multi-proxy studies are necessary to understand sediment composition and related provenance on continental shelfs. Here it is shown that the spatial distribution of geochemical composition and grain size for surface sediments along the southeastern Italian coast is related to provenance and mechanisms influencing sediment pathways. A northern Adriatic/Italian provenance can be distinguished from a southern Apennine river source. This is done independent of grain size using the element ratios Ce/Ni and Zr/Cr. Furthermore, the origin of organic matter is determined using bulk carbon isotopes and the C/N ratio. Integrating these results with those from complementary studies on δ18O and δ13C of Globigerinoides ruber (white), the BIT index, stable isotopes of plant waxes and dinoflagellate cyst distribution from the same set of samples reveals that:

  5. Use of laser induced breakdown spectroscopy in the determination of gem provenance: beryls.

    PubMed

    McManus, Catherine E; McMillan, Nancy J; Harmon, Russell S; Whitmore, Robert C; De Lucia, Frank C; Miziolek, Andrzej W

    2008-11-01

    The provenance of gem stones has been of interest to geologists, gemologists, archeologists, and historians for centuries. Laser induced breakdown spectroscopy (LIBS) provides a minimally destructive tool for recording the rich chemical signatures of gem beryls (aquamarine, goshenite, heliodor, and morganite). Broadband LIBS spectra of 39 beryl (Be(3)Al(2)Si(6)O(18)) specimens from 11 pegmatite mines in New Hampshire, Connecticut, and Maine (USA) are used to assess the potential of using principal component analysis of LIBS spectra to determine specimen provenance. Using this technique, beryls from the three beryl-bearing zones in the Palermo #1 pegmatite (New Hampshire) can be recognized. However, the compositional variation within this single mine is comparable to that in beryls from all three states. Thus, a very large database with detailed location metadata will be required to routinely determine gem beryl provenance. PMID:19122706

  6. Elevated temperature differently affects foliar nitrogen partitioning in seedlings of diverse Douglas fir provenances.

    PubMed

    Du, Baoguo; Jansen, Kirstin; Junker, Laura Verena; Eiblmeier, Monika; Kreuzwieser, Jürgen; Gessler, Arthur; Ensminger, Ingo; Rennenberg, Heinz

    2014-10-01

    Global climate change causes an increase in ambient air temperature, a major environmental factor influencing plant physiology and growth that already has been perceived at the regional scale and is expected to become even more severe in the future. In the present study, we investigated the effect of elevated ambient air temperature on the nitrogen metabolism of two interior provenances of Douglas fir (Pseudotsuga menziesii var. glauca) originating from contrasting habitats, namely the provenances Monte Creek (MC) from a drier environment and Pend Oreille (PO) from a more humid environment. Three- to four-year-old seedlings of the two provenances were grown for 3 months in controlled environments under either control temperature (day 20 °C, night 15 °C) or high temperature (HT, 30/25 °C) conditions. Total nitrogen (N), soluble protein, chlorophyll and total amino acid (TAA) contents as well as individual amino acid concentrations were determined in both current-year and previous-year needles. Our results show that the foliar total N contents of the two provenances were unaffected by HT. Arginine, lysine, proline, glutamate and glutamine were the most abundant amino acids, which together contributed ∼88% to the TAA pool of current- and previous-year needles. High temperature decreased the contents of most amino acids of the glutamate family (i.e., arginine, proline, ornithine and glutamine) in current-year needles. However, HT did not affect the concentrations of metabolites related to the photorespiratory pathway, such as [Formula: see text], glycine and serine. In general, current-year needles were considerably more sensitive to HT than previous-year needles. Moreover, provenance PO originating from a mesic environment showed stronger responses to HT than provenance MC. Our results indicate provenance-specific plasticity in the response of Douglas fir to growth temperature. Provenance-specific effects of elevated temperature on N-use efficiency suggest

  7. Elevated temperature differently affects foliar nitrogen partitioning in seedlings of diverse Douglas fir provenances.

    PubMed

    Du, Baoguo; Jansen, Kirstin; Junker, Laura Verena; Eiblmeier, Monika; Kreuzwieser, Jürgen; Gessler, Arthur; Ensminger, Ingo; Rennenberg, Heinz

    2014-10-01

    Global climate change causes an increase in ambient air temperature, a major environmental factor influencing plant physiology and growth that already has been perceived at the regional scale and is expected to become even more severe in the future. In the present study, we investigated the effect of elevated ambient air temperature on the nitrogen metabolism of two interior provenances of Douglas fir (Pseudotsuga menziesii var. glauca) originating from contrasting habitats, namely the provenances Monte Creek (MC) from a drier environment and Pend Oreille (PO) from a more humid environment. Three- to four-year-old seedlings of the two provenances were grown for 3 months in controlled environments under either control temperature (day 20 °C, night 15 °C) or high temperature (HT, 30/25 °C) conditions. Total nitrogen (N), soluble protein, chlorophyll and total amino acid (TAA) contents as well as individual amino acid concentrations were determined in both current-year and previous-year needles. Our results show that the foliar total N contents of the two provenances were unaffected by HT. Arginine, lysine, proline, glutamate and glutamine were the most abundant amino acids, which together contributed ∼88% to the TAA pool of current- and previous-year needles. High temperature decreased the contents of most amino acids of the glutamate family (i.e., arginine, proline, ornithine and glutamine) in current-year needles. However, HT did not affect the concentrations of metabolites related to the photorespiratory pathway, such as [Formula: see text], glycine and serine. In general, current-year needles were considerably more sensitive to HT than previous-year needles. Moreover, provenance PO originating from a mesic environment showed stronger responses to HT than provenance MC. Our results indicate provenance-specific plasticity in the response of Douglas fir to growth temperature. Provenance-specific effects of elevated temperature on N-use efficiency suggest

  8. Provenance through the limit: integrated provenance from the Devonian sedimentary and basement rocks from the northern segment of the Eastern Cordillera of the Colombian Andes

    NASA Astrophysics Data System (ADS)

    Cardona, Agustin; Valencia, Victor; Lotero, Andrea; Villafañez, Yohana; Augustsson, Carita; Bayona, German; Ibañez, Mauricio

    2013-04-01

    The provenance record of sedimentary rocks is sometimes the only available archive of the geological evolution in continuously active continental margins where continuous exhumation, erosion and along strike fragmentation of continental margins destroy geological evidences. New integrated provenance constraints from segmented exposures of Devonian rocks of the northern segment of the Eastern Cordillera of Colombia are used to reconstruct overimposed Paleozoic, Mesozoic and Cenozoic paleogeographic scenarios of the northern Andes. Sandstones from deltaic to platform environments are characterized by very high quartz contents, stable to ultrastable heavy minerals and mostly angular fragments. U-Pb detrital zircon geochronology reveals prominent Silurian to Ordovician and Mesoproterozoic (Grenvillian) age populations with minor Devonian zircons. Tourmaline geochemistry and detrital quarz characterization suggest prominent low grade metamorphic sources. These provenance fingerprints can be related to the erosion of the older metasedimentary basement exposed in the same region and record the transition from a terrane collisional event to the formation of a new subduction zone before the final Late Paleozoic events that end in the agglutination of Pangea. The U-Pb detrital record of the Devonian and basement rocks of the Eastern Cordillera are also comparable with Early to Middle Paleozic Paleozoic rocks form the Northern segment of the eastern Peruvian Andes re-inforcing the view of along strike terrane thousand of kilometer transport along the Mesozoic proto-Andean margin. Petrographic and heavy mineral petrofacies and stratigraphic correlation between Devonian localities are also used as piercing points to document Cenozoic ten of kilometers strike slip displacements along the northern termination of the Eastern Cordillera.

  9. LA-ICP-MS as Tool for Provenance Analyses in Arctic Marine Sediments

    NASA Astrophysics Data System (ADS)

    Wildau, Antje; Garbe-Schönberg, Dieter

    2015-04-01

    The hydraulic transport of sediments is a major geological process in terrestrial and marine systems and is responsible for the loss, redistribution and accumulation of minerals. Provenance analyses are a powerful tool for assessing the origin and dispersion of material in ancient and modern fluvial and marine sediments. Provenance-specific heavy minerals (e.g., zircon, rutile, tourmaline) can therefore be used to provide valuable information on the formation of ore deposits (placer deposits), and the reconstruction of paleogeography, hydrology, climate conditions and developments. The application of provenances analyses for the latter reason is of specific interest, since there is need for research on the progressing climate change, and heavy minerals represent good proxies for the evaluation of recent and past changes in the climate. The study of these fine particles provides information about potential regional or long distance transport paths, glacial / ice drift and current flows, freezing and melting events as well as depositional centers for the released sediments. Classic methods applied for provenance analyses are mapping of the presence / absence of diagnostic minerals, their grain size distribution, modal mineralogy and the analysis of variations in ratio of two or more heavy minerals. Electron microprobe has been established to discover changes in mineral chemistry of individual mineral phases, which can indicate fluctuations or differences in the provenance. All these methods bear the potential of high errors that lower the validity of the provenance analyses. These are for example the misclassification of mineral species due to undistinguishable optical properties or the limitations in the detection / variations of trace elements using the election microprobe. For this case study, marine sediments from the Arctic Ocean have been selected to test if LA-ICP-MS can be established as a key technique for precise and reliable provenance analyses. The Laptev

  10. Scab susceptibility of a provenance collection of pecan in three different seasons in the Southeastern USA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Pecan scab (caused by Fusicladium effusum) is the most economically destructive disease of pecan in the Southeast US. Wet, humid conditions typical of the Southeast are known to provide conditions conducive to epidemics. A provenance collection of pecan from 19 locations representing the native rang...

  11. Scab susceptibility of a provenance collection of pecan in in the southeastern USA

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Pecan scab is the most economically destructive disease of pecan in the Southeast US. It is spread in rain and is widespread in the Southeast where conditions conducive to epidemics. A provenance collection of pecan from 19 locations representing the native range of the tree is located in Byron, Geo...

  12. ACSM Fitness Book: A Proven Step-By-Step Program from the Experts. Third Edition.

    ERIC Educational Resources Information Center

    American Coll. of Sports Medicine, Indianapolis, IN.

    This offers advice on the health benefits of regular physical activity. It includes a scientifically proven fitness test to determine one's starting point and monitor ongoing progress, offering step-by-step instructions, sample programs, and insights on nutrition, weight control, motivation, and overcoming setbacks. Seven chapters examine: (1) "An…

  13. Preparing All Teachers to Use Proven, Effective Instructional Methods across the Curriculum. High Schools That Work

    ERIC Educational Resources Information Center

    Southern Regional Education Board (SREB), 2012

    2012-01-01

    Research has shown that certain ways of teaching can make a difference in whether students learn standards-based content. Many strategies have proven to be effective in teaching literacy, mathematics, science and social studies. These strategies have facilitated blending academic and career/technical subjects to make learning more meaningful for…

  14. Protru: Leveraging Provenance to Enhance Network Trust in a Wireless Sensor Network

    ERIC Educational Resources Information Center

    Dogan, Gulustan

    2013-01-01

    Trust can be an important component of wireless sensor networks for believability of the produced data and historical value is a crucial asset in deciding trust of the data. A node's trust can change over time after its initial deployment due to various reasons such as energy loss, environmental conditions or exhausting sources. Provenance can…

  15. Quantifying sediment provenance using multiple composite fingerprints in a small watershed in Oklahoma

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Quantitative information on sediment provenance is badly needed for calibration and validation of process-based soil erosion models. However, sediment source data are rather limited due to difficulties in direct measurement of various source contributions at a watershed scale. The objectives are t...

  16. Ages and possible provenance of the sediments of the Capim River kaolin, northern Brazil

    NASA Astrophysics Data System (ADS)

    Sousa, D. J. L.; Varajão, A. F. D. C.; Yvon, J.; Scheller, T.; Moura, C. A. V.

    2007-06-01

    Provenance studies carried out on the soft and flint facies of the Capim River kaolin (northern Brazil) trace the possible sources of sediments that host the ore. Pb-Pb evaporation geochronology was applied to four predominant morphologic classes of detrital zircons, and the ages obtained were compared to the main age intervals of the rocks surrounding the Capim kaolin district (CKD). Four major plateau ages (2.15, 2.02, 1.87, and 1.51 Ga) were defined for both soft and flint facies, indicating a common source for the kaolin and provenance from NE and SW. The 2.15 and 2.02 Ga ages correlate with the granitic bodies of the Gurupi region, located NE of the study area. The 1.87 and 1.51 Ga ages show provenance from the Amazon Craton, the former from the southern portion, in the Carajás region, and the latter from the southwestern portion. Although less abundant, Archean (3.18, 2.79, and 2.55 Ga) and Neoproterozoic ages (0.8 and 0.51 Ga) also correlate with the SW and NE provenances, respectively. The first corresponds to the oldest rocks of the Carajás region and the second to the rocks of the Gurupi region, corresponding to the Brasiliano orogeny.

  17. K/Ar geochronology as a tool for tracing dust provenance in the Southern Hemisphere

    NASA Astrophysics Data System (ADS)

    Pu, J.; Koffman, B. G.; Recasens, C.; Hemming, S. R.; Kaplan, M. R.; Gombiner, J. H.; Boswell, S.; Williams, T.

    2015-12-01

    Determining the sources and transport pathways of dust can provide a better understanding of past atmospheric circulation and give insight into nutrient and radiative effects on the climate system. Mineralogy and radiogenic isotope chemistry using strontium (Sr) and neodymium (Nd) have been able to constrain sources of dust but are not sufficient to distinguish among important potential source areas in the Southern Hemisphere. The K/Ar isotope system can improve our ability to infer dust provenance because it can discriminate between sources that have similar crustal residence ages but different subsequent tectonothermal histories. To assess K/Ar ages as a provenance tool, we measured radiogenic argon concentrations of samples from potential dust sources such as glaciogenic sediments in Patagonia and New Zealand. Provenance ages from Patagonian sediments cluster around 70 Ma with a range from 33.2 ± 0.4 Ma to 120 ± 3 Ma, and those from New Zealand sediments cluster around 160 Ma with a range from 125 ± 1 Ma to 191 ± 2 Ma, showing that K/Ar geochronology can discriminate between these two source areas and improve upon previous provenance studies. In addition, as a proof of concept we made a case study of a sedimentary time series from core TN057-6 on the Agulhas Ridge in the southeast Atlantic Ocean as well as a set of Holocene and glacial samples from four cores along the SE African margin. We found that K/Ar provenance ages of the <5μm terrigenous material from TN057-6 are best explained as the result of mixing of sediments transported from Patagonia and Africa-derived sediments delivered by the Agulhas Current. The K/Ar method was also able to show different sediment provenance between glacial and interglacial times, with a dominant Patagonian signature during glacial intervals. Ongoing work aims to characterize additional Southern Hemisphere dust sources, including the ice-free regions of Antarctica, and apply the K/Ar provenance tool to dust in Antarctic

  18. Facilitating Scientific Research through Workflows and Provenance on the DataONE Cyberinfrastructure (Invited)

    NASA Astrophysics Data System (ADS)

    Ludaescher, B.; Cuevas-Vicenttín, V.; Missier, P.; Dey, S.; Kianmajd, P.; Wei, Y.; Koop, D.; Chirigati, F.; Altintas, I.; Belhajjame, K.; Bowers, S.

    2013-12-01

    Provenance data has numerous applications in science. Two key ones are 1) replication: facilitate the repeatable derivation of results and 2) discovery: enable the location of data based on processing history and derivation relationships. The following scenario illustrates a typical use of provenance data. Alice, a climate scientist, has developed a VisTrails workflow to prepare Gross Primary Productivity (GPP) data. After verifying that the workflow generates data in the desired form, she uses the ReproZip tool to create a reproducible package that will enable other scientists to re-run the workflow without having to install and configure the particular libraries she is using. In addition, she exports the provenance information of the workflow execution and customizes it through a tool such as the ProvExplorer, in order to eliminate the information she regards as superfluous. She then creates and shares a DataONE data package containing the data she prepared, the ReproZip package, the customized provenance, and additional science/system metadata. Both the customized provenance and metadata are indexed by the DataONE Cyberinfrastructure (CI) for discovery purposes. Bob, another climate scientist, is looking for a benchmark GPP data to validate the Terrestrial Biosphere Model (TBM) he has developed. Searching the DataONE repository he finds Alice's data package. He retrieves its ReproZip package, customizes it (e.g. changing the spatial resolution), and re-runs it to generate the benchmark data in the form he desires. The newly generated data is then used as input for his own model evaluation workflow. His workflow generates residual maps and a Taylor diagram that enable him to evaluate the similarity between the results of his model and the benchmark data. At this point, Bob can also make use of the tools Alice used to publish his results as another discoverable and reproducible data package. In order to support these capabilities, we propose to extend the Data

  19. A coastal and an interior Douglas fir provenance exhibit different metabolic strategies to deal with drought stress.

    PubMed

    Du, Baoguo; Jansen, Kirstin; Kleiber, Anita; Eiblmeier, Monika; Kammerer, Bernd; Ensminger, Ingo; Gessler, Arthur; Rennenberg, Heinz; Kreuzwieser, Jürgen

    2016-02-01

    Drought is a major environmental stress affecting growth and vitality of forest ecosystems. In the present study, foliar nitrogen (N) and carbon (C) metabolism of two Douglas fir (Pseudotsuga menziesii) provenances with assumed different drought tolerance were investigated. We worked with 1-year-old seedlings of the interior provenance Fehr Lake (FEHR) originating from a dry environment and the coastal provenance Snoqualmie (SNO) from a more humid origin. Total C and N, structural N and the concentrations of soluble protein, total amino acids (TAAs) and individual amino acids as well as the relative abundance of polar, low-molecular-weight metabolites including antioxidants were determined in current-year needles exposed either to 42 days of drought or to 42 days drought plus 14 days of rewatering. The seedlings reacted in a provenance-specific manner to drought stress. Coastal provenance SNO showed considerably increased contents of TAAs, which were caused by increased abundance of the quantitatively most important amino acids arginine, ornithine and lysine. Additionally, the polyamine putrescine accumulated exclusively in drought-stressed trees of this provenance. In contrast, the interior provenance FEHR showed the opposite response, i.e., drastically reduced concentrations of these amino acids. However, FEHR showed considerably increased contents of pyruvate-derived and aromatic amino acids, and also higher drought-induced levels of the antioxidants ascorbate and α-tocopherol. In response to drought, both provenances produced large amounts of carbohydrates, such as glucose and fructose, most likely as osmolytes that can readily be metabolized for protection against osmotic stress. We conclude that FEHR and SNO cope with drought stress in a provenance-specific manner: the coastal provenance SNO was mainly synthesizing N-based osmolytes, a reaction not observed in the interior provenance FEHR; instead, the latter increased the levels of scavengers of reactive

  20. A coastal and an interior Douglas fir provenance exhibit different metabolic strategies to deal with drought stress.

    PubMed

    Du, Baoguo; Jansen, Kirstin; Kleiber, Anita; Eiblmeier, Monika; Kammerer, Bernd; Ensminger, Ingo; Gessler, Arthur; Rennenberg, Heinz; Kreuzwieser, Jürgen

    2016-02-01

    Drought is a major environmental stress affecting growth and vitality of forest ecosystems. In the present study, foliar nitrogen (N) and carbon (C) metabolism of two Douglas fir (Pseudotsuga menziesii) provenances with assumed different drought tolerance were investigated. We worked with 1-year-old seedlings of the interior provenance Fehr Lake (FEHR) originating from a dry environment and the coastal provenance Snoqualmie (SNO) from a more humid origin. Total C and N, structural N and the concentrations of soluble protein, total amino acids (TAAs) and individual amino acids as well as the relative abundance of polar, low-molecular-weight metabolites including antioxidants were determined in current-year needles exposed either to 42 days of drought or to 42 days drought plus 14 days of rewatering. The seedlings reacted in a provenance-specific manner to drought stress. Coastal provenance SNO showed considerably increased contents of TAAs, which were caused by increased abundance of the quantitatively most important amino acids arginine, ornithine and lysine. Additionally, the polyamine putrescine accumulated exclusively in drought-stressed trees of this provenance. In contrast, the interior provenance FEHR showed the opposite response, i.e., drastically reduced concentrations of these amino acids. However, FEHR showed considerably increased contents of pyruvate-derived and aromatic amino acids, and also higher drought-induced levels of the antioxidants ascorbate and α-tocopherol. In response to drought, both provenances produced large amounts of carbohydrates, such as glucose and fructose, most likely as osmolytes that can readily be metabolized for protection against osmotic stress. We conclude that FEHR and SNO cope with drought stress in a provenance-specific manner: the coastal provenance SNO was mainly synthesizing N-based osmolytes, a reaction not observed in the interior provenance FEHR; instead, the latter increased the levels of scavengers of reactive

  1. Provenance, life span, and phylogeny do not affect grass species' responses to nitrogen and phosphorus.

    PubMed

    Seabloom, Eric W; Benfield, Cara D; Borer, Elizabeth T; Stanley, Amanda G; Kaye, Thomas N; Dunwiddie, Peter W

    2011-09-01

    Successful conservation management requires an understanding of how species respond to intervention. Native and exotic species may respond differently to management interventions due to differences arising directly from their origin (i.e., provenance) or indirectly due to biased representations of different life history types (e.g., annual vs. perennial life span) or phylogenetic lineages among provenance (i.e., native or exotic origin) groups. Thus, selection of a successful management regime requires knowledge of the life history and provenance-bias in the local flora and an understanding of the interplay between species characteristics across existing environmental gradients in the landscape. Here we tested whether provenance, phylogeny, and life span interact to determine species distributions along natural gradients of soil chemistry (e.g., soil nitrogen and phosphorus) in 10 upland prairie sites along a 600-km latitudinal transect running from southern Vancouver Island in British Columbia, Canada, to the Willamette Valley in Oregon, USA. We found that soil nitrate, phosphorus, and pH exerted strong control over community composition. However, species distributions along environmental gradients were unrelated to provenance, life span, or phylogenetic groupings. We then used a greenhouse experiment to more precisely measure the response of common grass species to nitrogen and phosphorus supply. As with the field data, species responses to nutrient additions did not vary as a function of provenance, life span, or phylogeny. Native and exotic species differed strongly in the relationship between greenhouse-measured tolerance of low nutrients and field abundance. Native species with the greatest ability to maintain biomass production at low nutrient supply rates were most abundant in field surveys, as predicted by resource competition theory. In contrast, there was no relationship between exotic-species biomass at low nutrient levels and field abundance. The

  2. Provenance, life span, and phylogeny do not affect grass species' responses to nitrogen and phosphorus.

    PubMed

    Seabloom, Eric W; Benfield, Cara D; Borer, Elizabeth T; Stanley, Amanda G; Kaye, Thomas N; Dunwiddie, Peter W

    2011-09-01

    Successful conservation management requires an understanding of how species respond to intervention. Native and exotic species may respond differently to management interventions due to differences arising directly from their origin (i.e., provenance) or indirectly due to biased representations of different life history types (e.g., annual vs. perennial life span) or phylogenetic lineages among provenance (i.e., native or exotic origin) groups. Thus, selection of a successful management regime requires knowledge of the life history and provenance-bias in the local flora and an understanding of the interplay between species characteristics across existing environmental gradients in the landscape. Here we tested whether provenance, phylogeny, and life span interact to determine species distributions along natural gradients of soil chemistry (e.g., soil nitrogen and phosphorus) in 10 upland prairie sites along a 600-km latitudinal transect running from southern Vancouver Island in British Columbia, Canada, to the Willamette Valley in Oregon, USA. We found that soil nitrate, phosphorus, and pH exerted strong control over community composition. However, species distributions along environmental gradients were unrelated to provenance, life span, or phylogenetic groupings. We then used a greenhouse experiment to more precisely measure the response of common grass species to nitrogen and phosphorus supply. As with the field data, species responses to nutrient additions did not vary as a function of provenance, life span, or phylogeny. Native and exotic species differed strongly in the relationship between greenhouse-measured tolerance of low nutrients and field abundance. Native species with the greatest ability to maintain biomass production at low nutrient supply rates were most abundant in field surveys, as predicted by resource competition theory. In contrast, there was no relationship between exotic-species biomass at low nutrient levels and field abundance. The

  3. Ontology development for provenance tracing in National Climate Assessment of the US Global Change Research Program

    NASA Astrophysics Data System (ADS)

    Ma, X.; Zheng, J. G.; Goldstein, J.; Duggan, B.; Xu, J.; Du, C.; Akkiraju, A.; Aulenbach, S.; Tilmes, C.; Fox, P. A.

    2013-12-01

    The periodical National Climate Assessment (NCA) of the US Global Change Research Program (USGCRP) [1] produces reports about findings of global climate change and the impacts of climate change on the United States. Those findings are of great public and academic concerns and are used in policy and management decisions, which make the provenance information of findings in those reports especially important. The USGCRP is developing a Global Change Information System (GCIS), in which the NCA reports and associated provenance information are the primary records. We were modeling and developing Semantic Web applications for the GCIS. By applying a use case-driven iterative methodology [2], we developed an ontology [3] to represent the content structure of a report and the associated provenance information. We also mapped the classes and properties in our ontology into the W3C PROV-O ontology [4] to realize the formal presentation of provenance. We successfully implemented the ontology in several pilot systems for a recent National Climate Assessment report (i.e., the NCA3). They provide users the functionalities to browse and search provenance information with topics of interest. Provenance information of the NCA3 has been made structured and interoperable by applying the developed ontology. Besides the pilot systems we developed, other tools and services are also able to interact with the data in the context of the 'Web of data' and thus create added values. Our research shows that the use case-driven iterative method bridges the gap between Semantic Web researchers and earth and environmental scientists and is able to be deployed rapidly for developing Semantic Web applications. Our work also provides first-hand experience for re-using the W3C PROV-O ontology in the field of earth and environmental sciences, as the PROV-O ontology is recently ratified (on 04/30/2013) by the W3C as a recommendation and relevant applications are still rare. [1] http

  4. Graphical representations of the chemistry of garnets in a three-dimensional MATLAB based provenance plot

    NASA Astrophysics Data System (ADS)

    Knierzinger, Wolfgang; Palzer, Markus; Wagreich, Michael; Meszar, Maria; Gier, Susanne

    2016-04-01

    A newly developed, MATLAB based garnet provenance plot allows a three-dimensional tetrahedral representation of the chemistry of garnets for the endmembers almandine, pyrope, spessartine and grossular. Based on a freely accessible database of Suggate & Hall (2013) and additional EPMA-data on the internet, the chemistry of more than 2500 garnets was evaluated and used to create various subfields that correspond to different facies conditions of metapelitic, metasomatic and metaigneous rocks as well as granitic rocks. These triangulated subfields act as reference structures within the tetrahedron, facilitating assignments of garnet chemistries to different lithologies. In comparison with conventional tenary garnet discrimination diagrams by Mange & Morton (2007), Wright/Preston et al. (1938/2002) and Aubrecht et al. (2009), this tetrahedral provenance plot enables a better assessment of the conditions of formation of garnets by reducing the overlapping of certain subfields. In particular, a clearer distinction between greenschist facies rocks, amphibolite facies rocks and granitic rocks can be achieved. First applications of the tetrahedral garnet plot provided new insights on sedimentary processes during the Lower Miocene in the pre-Alpine Molasse basin. Bibliography Aubrecht, R., Meres, S., Sykora, M., Mikus, T. (2009). Provenance of the detrital garnets and spinels from the Albian sediments of the Czorsztyn Unit (Pieniny Klippen Belt , Western Carpathians, Slovakia). In: Geologica Carpathica, Dec. 2009, 60, 6, pp. 463-483. Mange, M.A., Morton, A.C. (2007). Geochemistry of Heavy Minerals. In: Mange, M.A. & Wright, D.T.(2007).Heavy Minerals in Use, Amsterdam, pp. 345-391. Preston, J., Hartley, A., Mange-Rajetzky, M., Hole, M., May, G., Buck, S., Vaughan, L. (2002). The provenance of Triassic continental sandstones from the Beryl Field, northern North Sea: Mineralogical, geochemical and sedimentological constraints. In: Journal of Sedimentary Research, 72, pp. 18

  5. Solid state NMR and IR characterization of wood polymer structure in relation to tree provenance.

    PubMed

    Santoni, Ilaria; Callone, Emanuela; Sandak, Anna; Sandak, Jakub; Dirè, Sandra

    2015-03-01

    (13)C nuclear magnetic resonance and mid-infrared spectroscopies were used for characterizing changes in the chemical structure of wood polymers (cellulose, hemicellulose and lignin) in relation to the tree growth location. Samples of three provenances in Europe (Finland, Poland and Italy) were selected for studies. The requirement was to use untreated solid wood samples to minimize any manipulation to the nanostructure of native wood. The results confirm that the chemical and physical properties of samples belonging to the same wood species (Picea abies Karst.) differ due to the origin. Both FT-IR and dynamic NMR spectroscopies were able to correctly discriminate samples originating from three different provenances in Europe. Such methods might be very useful for both, research and understanding of wood microstructure and its variability due to the growth conditions. PMID:25498692

  6. Solid state NMR and IR characterization of wood polymer structure in relation to tree provenance.

    PubMed

    Santoni, Ilaria; Callone, Emanuela; Sandak, Anna; Sandak, Jakub; Dirè, Sandra

    2015-03-01

    (13)C nuclear magnetic resonance and mid-infrared spectroscopies were used for characterizing changes in the chemical structure of wood polymers (cellulose, hemicellulose and lignin) in relation to the tree growth location. Samples of three provenances in Europe (Finland, Poland and Italy) were selected for studies. The requirement was to use untreated solid wood samples to minimize any manipulation to the nanostructure of native wood. The results confirm that the chemical and physical properties of samples belonging to the same wood species (Picea abies Karst.) differ due to the origin. Both FT-IR and dynamic NMR spectroscopies were able to correctly discriminate samples originating from three different provenances in Europe. Such methods might be very useful for both, research and understanding of wood microstructure and its variability due to the growth conditions.

  7. Visualisation methods for large provenance collections in data-intensive collaborative platforms

    NASA Astrophysics Data System (ADS)

    Spinuso, Alessandro; Fligueira, Rosa; Atkinson, Malcolm; Gemuend, Andre

    2016-04-01

    This work investigates improving the methods of visually representing provenance information in the context of modern data-driven scientific research. It explores scenarios where data-intensive workflows systems are serving communities of researchers within collaborative environments, supporting the sharing of data and methods, and offering a variety of computation facilities, including HPC, HTC and Cloud. It focuses on the exploration of big-data visualization techniques aiming at producing comprehensive and interactive views on top of large and heterogeneous provenance data. The same approach is applicable to control-flow and data-flow workflows or to combinations of the two. This flexibility is achieved using the W3C-PROV recommendation as a reference model, especially its workflow oriented profiles such as D-PROV (Messier et al. 2013). Our implementation is based on the provenance records produced by the dispel4py data-intensive processing library (Filgueira et al. 2015). dispel4py is an open-source Python framework for describing abstract stream-based workflows for distributed data-intensive applications, developed during the VERCE project. dispel4py enables scientists to develop their scientific methods and applications on their laptop and then run them at scale on a wide range of e-Infrastructures (Cloud, Cluster, etc.) without making changes. Users can therefore focus on designing their workflows at an abstract level, describing actions, input and output streams, and how they are connected. The dispel4py system then maps these descriptions to the enactment platforms, such as MPI, Storm, multiprocessing. It provides a mechanism which allows users to determine the provenance information to be collected and to analyze it at runtime. For this work we consider alternative visualisation methods for provenance data, from infinite lists and localised interactive graphs, to radial-views. The latter technique has been positively explored in many fields, from text

  8. Rapid elemental analysis and provenance study of Blumea balsamifera DC using laser-induced breakdown spectroscopy.

    PubMed

    Liu, Xiaona; Zhang, Qiao; Wu, Zhisheng; Shi, Xinyuan; Zhao, Na; Qiao, Yanjiang

    2015-01-01

    Laser-induced breakdown spectroscopy (LIBS) was applied to perform a rapid elemental analysis and provenance study of Blumea balsamifera DC. Principal component analysis (PCA) and partial least squares discriminant analysis (PLS-DA) were implemented to exploit the multivariate nature of the LIBS data. Scores and loadings of computed principal components visually illustrated the differing spectral data. The PLS-DA algorithm showed good classification performance. The PLS-DA model using complete spectra as input variables had similar discrimination performance to using selected spectral lines as input variables. The down-selection of spectral lines was specifically focused on the major elements of B. balsamifera samples. Results indicated that LIBS could be used to rapidly analyze elements and to perform provenance study of B. balsamifera. PMID:25558999

  9. Rapid Elemental Analysis and Provenance Study of Blumea balsamifera DC Using Laser-Induced Breakdown Spectroscopy

    PubMed Central

    Liu, Xiaona; Zhang, Qiao; Wu, Zhisheng; Shi, Xinyuan; Zhao, Na; Qiao, Yanjiang

    2015-01-01

    Laser-induced breakdown spectroscopy (LIBS) was applied to perform a rapid elemental analysis and provenance study of Blumea balsamifera DC. Principal component analysis (PCA) and partial least squares discriminant analysis (PLS-DA) were implemented to exploit the multivariate nature of the LIBS data. Scores and loadings of computed principal components visually illustrated the differing spectral data. The PLS-DA algorithm showed good classification performance. The PLS-DA model using complete spectra as input variables had similar discrimination performance to using selected spectral lines as input variables. The down-selection of spectral lines was specifically focused on the major elements of B. balsamifera samples. Results indicated that LIBS could be used to rapidly analyze elements and to perform provenance study of B. balsamifera. PMID:25558999

  10. Provenance studies of Central European Neolithic obsidians using external beam milli-PIXE spectroscopy

    NASA Astrophysics Data System (ADS)

    Constantinescu, B.; Cristea-Stan, D.; Kovács, I.; Szőkefalvi-Nagy, Z.

    2014-01-01

    External beam milli-PIXE technique was used for the determination of the elemental concentration ratios in some Prehistoric obsidian tools found in Transylvania, in the Iron Gates region near Danube, as well as on a few relevant geological obsidian samples from Slovak Tokaj Mountains, Lipari, Armenia. As provenance "fingerprints" the Ti to Mn and Rb to Zr ratios were used. The results confirm that the Transylvanian Neolithic samples have a Slovak Tokaj Mountains provenance. For Iron Gates samples, there are at least two different geological sources: for Late Neolithic tools, the origin is also the Slovak Tokaj Mountains but for Late Mesolithic-Early Neolithic samples, the sources are clearly different, possibly of the Hungarian Tokaj Mountains or the Balkan-Aegean origin.

  11. Molasse of the Belskii depression of the Cis-Uralian foredeep: Modern data about provenance

    NASA Astrophysics Data System (ADS)

    Mizens, G. A.; Maslov, A. V.; Badida, L. V.; Vovna, G. M.; Kiselev, V. I.; Ronkin, Yu. L.; Hiller, V. V.

    2015-12-01

    The crystallochemical characteristics of Cr-spinels and tourmalines in combination with U-Pb isotope data on detrital zircons from the Upper Permian and Lower Triassic sandstones of the Belskii Depression showed that the main provenances of the molasse sequence in the southern part of the Cis-Uralian foredeep were Lower Paleozoic (Sakmara zone) and Precambrian (Uraltau zone) complexes. The absence of Late Paleozoic zircons in the Tatarian (Upper Permian) sandstones, as well as their small amount in the Lower Triassic psammites together with geochemical and petrographic data, suggest that granite massifs of the Main Granitic Axis of the Urals, as Middle-Upper Paleozoic magmatic complexes of the Magnitogorsk Megazone, were not involved in erosion. At the same time, the significant amount of Precambrian zircons is indicative of the presence of metamorphic complexes in the provenance of the Uraltau zone.

  12. [A primary Raman microscopic study of the turquoise and its role in provenance-tracking].

    PubMed

    She, Ling-zhu; Qin, Ying; Feng, Min; Mao, Zhen-wei; Xu, Cun-yi; Huang, Feng-chun

    2008-09-01

    The authors analyzed four modern turquoises from Hubei province and Anhui province by using the Raman microscopic with the samples are gathered on the spot. According to the study the authors discovered that the Raman spectra of the Hubei turquoises with different color but with the same backgrounds of mineral resource and the formation cause of mineral resource and in the same formation line of turquoise mineral resource have little difference. On the contrary, there is a strong difference in the 900-100 cm(-1) region of the Raman spectra between the turquoises from Hubei province and the turquoise from Anhui province which has remarkable different backgrounds of mineral resource and the formation cause of mineral resource. At the same time the authors studied two ancient turquoises to discuss the feasibility of using the Raman spectra of turquoises, the provenance of which is known, as the fingerprint directions to track the provenance of ancient turquoises.

  13. A general practice trial of an amoxycillin/flucloxacillin combination (Suprapen) in proven bacterial infections.

    PubMed

    Kritzinger, N A

    1979-01-01

    Ninety-three cases of proven bacterial infection occurring in general practice were treated with an amoxycillin/flucloxacillin combination. There was a satisfactory clinical response in 98% of patients and an overall bacteriological success rate of 95.7%. Eleven patients (9.1%) complained of side-effects but withdrawal of the combination was necessary in only one patient who developed a rash.

  14. New Tools and the Road to Quantitative Models in Sedimentary Provenance Analysis

    NASA Astrophysics Data System (ADS)

    von Eynatten, Hilmar

    2010-05-01

    Sedimentary provenance analysis is one of the major techniques to link source area geology, climate evolution, and basin dynamics to the compositional characteristics of the clastic basin fill. The high potential of sediments for precise chronostratigraphic calibration in combination with state-of-the-art provenance analysis allows for detailed reconstruction of source area evolution in space and time. A wealth of new and/or refined analytical techniques has been developed in the last decade, especially regarding high-precision single-grain geochemical and geochronological techniques. Accordingly, ultrastable heavy minerals such as rutile or zircon provide inert mineral tracers in sedimentary systems and their analysis yield precise information on source rock petrology and chronology. In terms of quantitative provenance analysis there is, however, a strong need for connecting these detailed information on specific source rocks to the bulk mass transfer and sediment modification from source to sink. Such quantitative provenance models are still in their infancy for a number of reasons, among them (1) the overall complexity of the processes involved including multiple feedback mechanisms, (2) the heterogeneity of data bases with respect to large-scale basin-wide studies, and (3) the lack of tailor-made and user-friendly statistical-numerical models allowing for both forward and inverse modelling that consider the compositional nature of most bulk sediment data. First steps towards fully quantitative models include (i) development of algorithms relating petrographic-mineralogic and geochemical data to sediment grain size, (ii) quantifying chemical, physical, and biological processes and their impact on sediment production and modification, (iii) compositional mixture models, and (iv) verifying these analytical modules in large-scale modern systems, followed by (v) similar ancient systems that are even more complicated due to diagenetic processes.

  15. Impacts of drought on mineral macro- and microelements in provenances of beech (Fagus sylvatica L.) seedlings.

    PubMed

    Peuke, Andreas D; Rennenberg, Heinz

    2011-02-01

    Beech seedlings originating from 11 German provenances with different climatic conditions were grown in pots and cultivated in a greenhouse. The composition of macro- and microelements in roots, axes and leaves was measured after half of the seedlings were subjected to a simulated summer drought. The recently described sensitivity of these provenances to drought was compared with drought-mediated changes in the elemental and ionic composition in organs of the seedlings; in addition, partitioning between roots and shoots was evaluated. A number of element concentrations were decreased in roots due to drought (K 94% of control, Mg 94%, Mn 75% and Zn 85%). However, chloride concentration increased in all organs (115-125%) and was the only element affected in leaves. Some changes in ionome can be related to sensitivity of provenances, but it is difficult to decide whether these changes are a result of, or a reason for, drought tolerance or sensitivity. Observed increases in chloride concentration in all plant parts of drought-treated beech seedlings can be explained by its function in charge balance, in particular since the level of phosphate was reduced. As a result of chloride accumulation, the sum of added charges of anions (and cations) in water extracts of leaf and root material was similar between drought and control plants. Since only the partitioning of Ca and Al (both only in axis) as well as Mn was affected and other elements (together with previously observed effects on C, N, S and P) remained unaffected by drought in all provenances, it can be concluded that direct effects by means of mass flow inhibition in xylem and phloem are unlikely. Secondary effects, for example on the pH of transport sap and the apoplastic space, cannot be excluded from the present study. These effects may affect partitioning between the apoplast and symplast and therefore may be significant for drought sensitivity. PMID:21450981

  16. Neutron activation analysis of modern pottery: Insights for archaeological provenance research

    SciTech Connect

    Neff, H.; Arnold, D.E.; Benco, N.L.; Thieme, M.S.

    1996-12-31

    Neutron activation analysis has been employed to characterize ceramics and raw material samples from modern pottery-making communities. The original study focused on several villages in the central highlands of Guatemala. More recently, NAA data have been collected from communities in the Valley of Oaxaca, Mexico, the northern Yucatan Peninsula, and northern Morocco. The results from all four studies can now be combined to yield a comparative perspective on paste preparation effects in archaeological provenance research.

  17. Genetic delineation of local provenance defines seed collection zones along a climate gradient.

    PubMed

    Hufford, Kristina M; Veneklaas, Erik J; Lambers, Hans; Krauss, Siegfried L

    2016-01-01

    Efforts to re-establish native plant species should consider intraspecific variation if we are to restore genetic diversity and evolutionary potential. Data describing spatial genetic structure and the scale of adaptive differentiation are needed for restoration seed sourcing. Genetically defined provenance zones provide species-specific guidelines for the distance within which seed transfer likely maintains levels of genetic diversity and conserves locally adapted traits. While a growing number of studies incorporate genetic marker data in delineation of local provenance, they often fail to distinguish the impacts of neutral and non-neutral variation. We analysed population genetic structure for 134 amplified fragment length polymorphism (AFLP) markers in Stylidium hispidum (Stylidiaceae) along a north-south transect of the species' range with the goal to estimate the distance at which significant genetic differences occur among source and recipient populations in restoration. In addition, we tested AFLP markers for signatures of selection, and examined the relationship of neutral and putatively selected markers with climate variables. Estimates of population genetic structure revealed significant levels of differentiation (ΦPT = 0.23) and suggested a global provenance distance of 45 km for pairwise comparisons of 16 populations. Of the 134 markers, 13 exhibited evidence of diversifying selection (ΦPT = 0.52). Using data for precipitation and thermal gradients, we compared genetic, geographic and environmental distance for subsets of neutral and selected markers. Strong isolation by distance was detected in all cases, but positive correlations with climate variables were present only for markers with signatures of selection. We address findings in light of defining local provenance in ecological restoration.

  18. Provenance of the upper Miocene-Pliocene Red Clay deposits of the Chinese loess plateau

    NASA Astrophysics Data System (ADS)

    Nie, Junsheng; Peng, Wenbin; Möller, Andreas; Song, Yougui; Stockli, Daniel F.; Stevens, Thomas; Horton, Brian K.; Liu, Shanpin; Bird, Anna; Oalmann, Jeffrey; Gong, Hujun; Fang, Xiaomin

    2014-12-01

    A clear understanding of the provenance of late Cenozoic Chinese loess and the underlying Red Clay deposits will shed light on the history and mechanisms of Asian aridification. Although much progress has been made in understanding the source of Quaternary loess on the Chinese Loess Plateau (CLP), the provenance of the underlying upper Miocene-Pliocene Red Clay sequence is largely unknown. Here we present the first provenance history of the Red Clay sequence based on zircon U-Pb ages from the central CLP. Visual and statistical analyses of the U-Pb age populations and comparison with results from potential source regions reveals that (1) the lowermost Red Clay of the late Miocene (depositional age of ∼8 Ma) is likely sourced from the nearby Liupan Mountains and the Qaidam Basin; (2) the middle Red Clay (5.5-4 Ma) of the early-mid Pliocene is sourced mainly from the Taklamakan desert, transported via lower-level westerly winds; (3) the upper Red Clay of the late Pliocene (∼3 Ma) is sourced from mixed areas, although western source materials from middle-northern Tibetan plateau (including Qaidam Desert sediments and materials eroded from the Qilian Mountains) sediments appear to dominate; and (4) the Quaternary loess is also sourced from mixed source regions, albeit with dominant northern CLP proximal desert sediments transported via winter monsoon winds, which in turn may be transported from mountain source regions of the northeastern Tibet and Gobi Altai via major river systems. This long term shift in sources suggests a progressive eastward aridification during the Pliocene in Asia with the specific timing of provenance shifts synchronous with large-scale climatic transitions and Tibetan uplift, demonstrating that Asian desertification is controlled by both factors.

  19. A Multi-technique Approach for Provenance Studies of Mesozoic Clastic Rocks in the Barents Sea

    NASA Astrophysics Data System (ADS)

    Matthews, N. E.; Zimmermann, U.; Støle, L.; Ruud, C.; Mostafa, E.; Andò, S.; Borromeo, L.; Magnaghi, M.; Lapen, T. J.

    2015-12-01

    Sediments of Mesozoic age deposited in the Arctic Hammerfest and Tromsø basins (southern Barents Sea) are the focus of a comprehensive provenance study which forms part of ongoing work by the LoCrA consortium (Lower Cretaceous Basin Studies in the Arctic). Jurassic (Stø, Fuglen, Hekkingen) and Cretaceous (Knurr, Kolje, Kolmule) formations were sampled from seven wells. Analytical methods include petrography, whole-rock geochemistry, heavy mineral (HM) analysis and U-Pb on detrital zircons. HM concentration is <1%, with an ultrastable HM assemblage of zircon, rutile, tourmaline, spinel, apatite, garnet, chloritoid and common authigenic heavy minerals and opaques. Cretaceous sedimentary rocks show geochemical variations that reflect an unrecycled Upper Continental Crust signature, whereas Jurassic detritus tends to show more evidence of recycling with a relatively low input of mafic material. Kolmule Formation whole-rock geochemistry indicates sediment recycling from a major Sc-depleted but intermediate to mafic source and hence suggests input of rift detritus from the syn-depositional opening of the Atlantic Ocean. U-Pb ages for detrital zircons for Cretaceous sandstones show age groups of 200-500 Ma, 1200-1800 Ma, and 2100-2800 Ma, indicating potential source regions in the Urals/Novaya Zemlya, the Caledonides, Grenvillian/Sveconorwegian, and Palaeoproterozoic and Archean sources. Provenance data via geochemistry and HM analysis indicate different sources in the same formation basin-wide, with a significant change in provenance and sediment composition from Jurassic to Cretaceous and between the Knurr and Kolmule formations. These differences in composition need to be compared to detailed single grain studies and may only be explained in terms of basin dynamics, or even on a smaller scale, in terms of facies distributions. If so, this case study raises concerns about the use of single samples for provenance models on a larger scale.

  20. Provenance and diagenesis of Oligocene sandstones, southern San Joaquin basin, California

    SciTech Connect

    Hayes, M.J.

    1988-03-01

    Oligocene Vedder sandstones and correlatives from the southern San Joaquin basin provide an opportunity to compare diagenesis resulting from variable provenance, depositional environment, and burial or tectonic history. Sandstones were examined from 15 cores in this basin-wide petrographic survey. Oligocene sandstones typically are fine to medium grained, moderately sorted, subangular, and quartzofeldspathic, although sandstones from the western and east-central basin are enriched in potassium feldspar and intermediate volcanic rock fragments, respectively. Detrital compositions are transitional between uplifted continental block and undissected to dissected magmatic arc on provenance diagrams. Sediment provenance included the granodioritic Sierra Nevada-Tehachapi Mountain magmatic arc complex and perhaps granitic terranes to the west. Volcanic detritus was shed from southern and eastern sources. Diagenesis varies within the basin, partly reflecting local pore-fluid evolution and detrital composition. The effects of variable geothermal gradients, sedimentation rate, and tectonism on diagenesis await evaluation. In the composite basin-wide paragenetic sequence, calcite, dolomite, siderite, and chlorite-smectite are earliest authigenic phases. Variable cement and compaction relationships indicate nonuniform depth and timing of cementation. Early cements inhibited subsequent diagenesis and compaction. With deeper burial, plagioclase, potassium feldspar, and carbonates dissolved, pore-filling kaolinite precipitated, plagioclase was albitized and zeolitized, and late-stage carbonates crystallized. Further geochemical analyses will better define composition and origin of authigenic phases and document reaction progress. Cement zones and sources may be identified and spatially and temporally linked in an attempt to constrain scales and rates of mass transfer of calcium basin wide.

  1. Geochemistry of loess-paleosol sediments of Kashmir Valley, India: Provenance and weathering

    NASA Astrophysics Data System (ADS)

    Ahmad, Ishtiaq; Chandra, Rakesh

    2013-04-01

    Middle to Late Pleistocene loess-paleosol sediments of Kashmir Valley, India, were analyzed for major, trace and REE elements in order to determine their chemical composition, provenance and intensity of palaeo-weathering of the source rocks. These sediments are generally enriched with Fe2O3, MgO, MnO, TiO2, Y, Ni, Cu, Zn, Th, U, Sc, V and Co while contents of SiO2, K2O, Na2O, P2O5, Sr, Nb and Hf are lower than the UCC. Chondrite normalized REE patterns are characterized by moderate enrichment of LREEs, relatively flat HREE pattern (GdCN/YbCN = 1.93-2.31) and lack of prominent negative Eu anomaly (Eu/Eu* = 0.73-1.01, average = 0.81). PAAS normalized REE are characterized by slightly higher LREE, depleted HREE and positive Eu anomaly. Various provenance discrimination diagrams reveal that the Kashmir Loess-Paleosol sediments are derived from the mixed source rocks suggesting large provenance with variable geological settings, which apparently have undergone weak to moderate recycling processes. Weathering indices such as CIA, CIW and PIA values (71.87, 83.83 and 80.57 respectively) and A-CN-K diagram imply weak to moderate weathering of the source material.

  2. Providing Global Change Information for Decision-Making: Capturing and Presenting Provenance

    NASA Technical Reports Server (NTRS)

    Ma, Xiaogang; Fox, Peter; Tilmes, Curt; Jacobs, Katherine; Waple, Anne

    2014-01-01

    Global change information demands access to data sources and well-documented provenance to provide evidence needed to build confidence in scientific conclusions and, in specific applications, to ensure the information's suitability for use in decision-making. A new generation of Web technology, the Semantic Web, provides tools for that purpose. The topic of global change covers changes in the global environment (including alterations in climate, land productivity, oceans or other water resources, atmospheric composition and or chemistry, and ecological systems) that may alter the capacity of the Earth to sustain life and support human systems. Data and findings associated with global change research are of great public, government, and academic concern and are used in policy and decision-making, which makes the provenance of global change information especially important. In addition, since different types of decisions benefit from different types of information, understanding how to capture and present the provenance of global change information is becoming more of an imperative in adaptive planning.

  3. Discrimination of sediment provenance in the Yellow Sea: Secondary grain-size effect and REE proxy

    NASA Astrophysics Data System (ADS)

    Jung, Hoi-Soo; Lim, Dhongil; Jeong, Do-Hyun; Xu, Zhaokai; Li, Tiegang

    2016-06-01

    This study analyzed grain size and elemental concentrations (Al, Mg, Fe, and rare earth elements (REEs)) in 91 surface sediments to elucidate sediment provenance in the Yellow Sea. Elemental concentrations were normalized by Al concentration (Celement/CAl) to minimize the sediment grain-size effect (GSE). However, noticeable linear relationships between Al concentration (or mean grain size) and the ratio (e.g., Mg/Al or Fe/Al) appeared unexpectedly in pair diagrams. The spatial distribution patterns of Fe/Al and Mg/Al ratios were also similar to the pattern of mean grain size. This implies that the GSE was not removed completely, even after the normalization process. Thus, great care must be taken when applying the ratios of Celement/CAl as a proxy of sediment provenance. To improve provenance discrimination of the sediments in the Yellow Sea, the difference between the REE distribution patterns of Chinese and Korean river sediments, expressed as δ (δ = REE∗(La) - REE∗(Lu)), was calculated, and the spatial distribution patterns of the δ values were mapped. The δ values gradually increased from the western to the eastern part of the Yellow Sea, except for low δ values in the southeastern part of the Yellow Sea. This result indicates that the majority of Chinese and Korean river sediments are accumulating near to their respective coasts, except for a deposit along the southwestern coast of Korea in which a considerable amount of sediment from Chinese rivers has been accumulating.

  4. Strontium isotopes in otoliths of a non-migratory fish (slimy sculpin): Implications for provenance studies

    USGS Publications Warehouse

    Brennan, Sean R.; Fernandez, Diego P.; Zimmerman, Christian E.; Cerling, Thure E.; Brown, Randy J.; Wooller, Matthew J.

    2015-01-01

    Heterogeneity in 87Sr/86Sr ratios of river-dissolved strontium (Sr) across geologically diverse environments provides a useful tool for investigating provenance, connectivity and movement patterns of various organisms and materials. Evaluation of site-specific 87Sr/86Sr temporal variability throughout study regions is a prerequisite for provenance research, but the dynamics driving temporal variability are generally system-dependent and not accurately predictable. We used the time-keeping properties of otoliths from non-migratory slimy sculpin (Cottus cognatus) to evaluate multi-scale 87Sr/86Sr temporal variability of river waters throughout the Nushagak River, a large (34,700 km2) remote watershed in Alaska, USA. Slimy sculpin otoliths incorporated site-specific temporal variation at sub-annual resolution and were able to record on the order of 0.0001 changes in the 87Sr/86Sr ratio. 87Sr/86Sr profiles of slimy sculpin collected in tributaries and main-stem channels of the upper watershed indicated that these regions were temporally stable, whereas the Lower Nushagak River exhibited some spatio-teporal variability. This study illustrates how the behavioral ecology of a non-migratory organism can be used to evaluate sub-annual 87Sr/86Sr temporal variability and has broad implications for provenance studies employing this tracer.

  5. Features of Scots pine radial growth in conditions of provenance trial.

    NASA Astrophysics Data System (ADS)

    Kuzmin, Sergey; Kuzmina, Nina

    2013-04-01

    Provenance trial of Scots pine in Boguchany forestry of Krasnoyarsk krai is conducted on two different soils - dark-grey loam forest soil and sod-podzol sandy soil. Complex of negative factors for plant growth and development appears in dry conditions of sandy soil. It could results in decrease of resistance to diseases. Sandy soils in different climatic zones have such common traits as low absorbing capacity, poorness of elemental nutrition, low microbiological activity and moisture capacity, very high water permeability. But Scots pine trees growing in such conditions could have certain advantages and perspectives of use. In the scope of climate change (global warming) the study of Scots pine growth on sandy soil become urgent because of more frequent appearance of dry seasons. Purpose of the work is revelation of radial growth features of Scots pine with different origin in dry conditions of sandy soil and assessment of external factors influence. The main feature of radial growth of majority of studied pine provenances in conditions of sandy soil is presence of significant variation of increment with distinct decline in 25-years old with loss of tree rings in a number of cases. The reason of it is complex of factors: deficit of June precipitation and next following outbreak of fungal disease. Found «frost rings» for all trees of studied clymatypes in 1992 are the consequence of temperature decline from May 21 to June 2 - from 23 down to 2 degree Celsius. Perspective climatypes with biggest radial increments and least sensitivity to fungal disease were revealed. Eniseysk and Vikhorevka (from Krasnoyarsk krai and Irkutsk oblast)provenances of pine have the biggest radial increments, the least sensitivity to Cenangium dieback and smallest increments decline. These climatypes are in the group of perspective provenances and in present time they are recommended for wide trial in the region for future use in plantation forest growing. Kandalaksha (Murmansk oblast

  6. Provenance for actionable data products and indicators in marine ecosystem assessments

    NASA Astrophysics Data System (ADS)

    Beaulieu, S. E.; Maffei, A. R.; Fox, P. A.; West, P.; Di Stefano, M.; Hare, J. A.; Fogarty, M.

    2013-12-01

    Ecosystem-based management of Large Marine Ecosystems (LMEs) involves the sharing of data and information products among a diverse set of stakeholders - from environmental and fisheries scientists to policy makers, commercial entities, nonprofits, and the public. Often the data products that are shared have resulted from a number of processing steps and may also have involved the combination of a number of data sources. The traceability from an actionable data product or indicator back to its original data source(s) is important not just for trust and understanding of each final data product, but also to compare with similar data products produced by the different stakeholder groups. For a data product to be traceable, its provenance, i.e., lineage or history, must be recorded and preferably machine-readable. We are collaborating on a use case to develop a software framework for the bi-annual Ecosystem Status Report (ESR) for the U.S. Northeast Shelf LME. The ESR presents indicators of ecosystem status including climate forcing, primary and secondary production, anthropogenic factors, and integrated ecosystem measures. Our software framework retrieves data, conducts standard analyses, provides iterative and interactive visualization, and generates final graphics for the ESR. The specific process for each data and information product is updated in a metadata template, including data source, code versioning, attribution, and related contextual information suitable for traceability, repeatability, explanation, verification, and validation. Here we present the use of standard metadata for provenance for data products in the ESR, in particular the W3C provenance (PROV) family of specifications, including the PROV-O ontology which maps the PROV data model to RDF. We are also exploring extensions to PROV-O in development (e.g., PROV-ES for Earth Science Data Systems, D-PROV for workflow structure). To associate data products in the ESR to domain-specific ontologies we are

  7. Influence of tree provenance on biogenic VOC emissions of Scots pine (Pinus sylvestris) stumps

    NASA Astrophysics Data System (ADS)

    Kivimäenpää, Minna; Magsarjav, Narantsetseg; Ghimire, Rajendra; Markkanen, Juha-Matti; Heijari, Juha; Vuorinen, Martti; Holopainen, Jarmo K.

    2012-12-01

    Resin-storing plant species such as conifer trees can release substantial amounts of volatile organic compounds (VOCs) into the atmosphere under stress circumstances that cause resin flow. Wounding can be induced by animals, pathogens, wind or direct mechanical damage e.g. during harvesting. In atmospheric modelling of biogenic VOCs, actively growing vegetation has been mostly considered as the source of emissions. Root systems and stumps of resin-storing conifer trees could constitute a significant store of resin after tree cutting. Therefore, we assessed the VOC emission rates from the cut surface of Scots pine stumps and estimated the average emission rates for an area with a density of 2000 stumps per ha. The experiment was conducted with trees of one Estonian and three Finnish Scots pine provenances covering a 1200 km gradient at a common garden established in central Finland in 1991. VOC emissions were dominated by monoterpenes and less than 0.1% of the total emission was sesquiterpenes. α-Pinene (7-92% of the total emissions) and 3-carene (0-76% of the total emissions) were the dominant monoterpenes. Proportions of α-pinene and camphene were significantly lower and proportions of 3-carene, sabinene, γ-terpinene and terpinolene higher in the southernmost Saaremaa provenance compared to the other provenances. Total terpene emission rates (standardised to +20 °C) from stumps varied from 27 to 1582 mg h-1 m-2 when measured within 2-3 h after tree cutting. Emission rates decreased rapidly to between 2 and 79 mg h-1 m-2 at 50 days after cutting. The estimated daily terpene emission rates on a hectare basis from freshly cut stumps at a cut tree density of 2000 per ha varied depending on provenance. Estimated emission ranges were 100-710 g ha-1 d-1 and 137-970 g ha-1 d-1 in 40 and in 60 year-old forest stands, respectively. Our result suggests that emission directly from stump surfaces could be a significant source of monoterpene emissions for a few weeks after

  8. A third verdict option: exploring the impact of the not proven verdict on mock juror decision making.

    PubMed

    Hope, Lorraine; Greene, Edith; Memon, Amina; Gavisk, Melanie; Houston, Kate

    2008-06-01

    In most adversarial systems, jurors in criminal cases consider the binary verdict alternatives of "Guilty" and "Not guilty." However, in some circumstances and jurisdictions, a third verdict option is available: Not Proven. The Not Proven verdict essentially reflects the view that the defendant is indeed culpable, but that the prosecution has not proven its case beyond a reasonable doubt. Like a Not Guilty verdict, the Not Proven verdict results in an acquittal. The main aim of the two studies reported here was to determine how, and under what circumstances, jurors opt to use the Not Proven verdict across different case types and when the strength of the evidence varies. In both studies, jurors were more likely to choose a Not Proven verdict over a Not Guilty verdict when the alternative was available. When evidence against the defendant was only moderately strong and a Not Proven verdict option was available (Study 2), there was also a significant reduction in the conviction rate. Results also showed that understanding of the Not Proven verdict was poor, highlighting inadequacies in the nature of judicial instructions relating to this verdict.

  9. Geochemical Characterization of Dust in the Southern Ocean, Provenance and Paleoclimatic implications

    NASA Astrophysics Data System (ADS)

    Recasens, C.; Goldstein, S. L.; Winckler, G.; Kaplan, M. R.; Gili, S.; Gaiero, D. M.; Anderson, R. F.

    2013-12-01

    Wind-blown dust can be used to trace past and present atmospheric circulation patterns, through the study of its geographical provenance, its spatial distribution and temporal variability. Antarctic and marine records indicate that Patagonia has been a principal source of dust for the southern latitudes, particularly during glacial times. To improve our understanding of dust provenance and transport mechanisms downstream from South America and part-way to Antarctica, we analyzed the fine (<5 μm) fraction terrigenous input into the Southern Ocean by studying the 12.76-m piston core TNO57-6, from 3751 m water depth on the Agulhas Ridge in the Southeast Atlantic, north of the present-day position of the Subantarctic Front and South of the Subtropical Convergence Zone. Due to this core's location and depth, and the position of the winds and marine currents, we suggest that the major input of sediment comes from wind-blown dust material originating in South America. To fingerprint better the terrigenous detritus, we measured chemical compositions and Sr-Nd-Pb-He isotope ratios in samples ranging in age from present-day to MIS 6. Additionally we analyzed material from potential dust source areas in different locations in Patagonia to refine their geochemical signatures. Our first results suggest that the glacial and interglacial samples have different provenances, and that the purely Patagonian sources may represent only the glacial end-member of the dust reaching that location. Further analyses at higher time resolution in the marine record will improve understanding of the relationships between the dust arriving at the site with changing climate, and continued study of potential source area samples (including Patagonia and farther North in La Puna and Altiplano) will help define the other end-member in the dust composition, and thus the more active dust sources during interglacial intervals.

  10. Provenance and paleogeography of the Devonian Durazno Group, southern Parana Basin in Uruguay

    NASA Astrophysics Data System (ADS)

    Uriz, N. J.; Cingolani, C. A.; Basei, M. A. S.; Blanco, G.; Abre, P.; Portillo, N. S.; Siccardi, A.

    2016-03-01

    A succession of Devonian cover rocks occurs in outcrop and in the subsurface of central-northern Uruguay where they were deposited in an intracratonic basin. This Durazno Group comprises three distinct stratigraphic units, namely the Cerrezuelo, Cordobés and La Paloma formations. The Durazno Group does not exceed 300 m of average thickness and preserves a transgressive-regressive cycle within a shallow-marine siliciclastic shelf platform, and is characterized by an assemblage of invertebrate fossils of Malvinokaffric affinity especially within the Lower Devonian Cordobés shales. The sedimentary provenance of the Durazno Group was determined using petrography, geochemistry, and morphological studies of detrital zircons as well as their U-Pb ages. Sandstone petrography of Cerrezuelo and La Paloma sequences shows that they have a dominantly quartz-feldspathic composition with a minor contribution of other minerals. Whole-rock geochemical data indicate that alteration was strong in each of the three formations studied; chondritic-normalized REE patterns essentially parallel to PAAS, the presence of a negative Eu-anomaly, and Th/Sc and La/Hf ratios point to an average source composition similar to UCC or slightly more felsic. Within the Cerrezuelo Formation, recycling of older volcano-metasedimentary sources is interpreted from Zr/Sc ratios and high Hf, Zr, and REE concentrations. U-Pb detrital zircon age populations of the Cerrezuelo and La Paloma formations indicate that the principal source terranes are of Neoproterozoic age, but include also minor populations derived from Mesoproterozoic and Archean-Paleoproterozoic rocks. A provenance from the Cuchilla Dionisio-Dom Feliciano, Nico Pérez and Piedra Alta terranes of Uruguay and southern Brazil is likely. This study establishes an intracratonic extensional tectonic setting during Durazno time. Considering provenance age sources, regional paleocurrent distributions and the established orogenic history recorded in SW

  11. Salt Provenance and Migration in Sediment Core Samples From Dry Valleys, Antarctica

    NASA Astrophysics Data System (ADS)

    Carpenter, T. M.; Sletten, R. S.; Nelson, B. K.

    2008-12-01

    The McMurdo Dry Valleys are characterized by hyperarid conditions and extensive salt accumulation. Soluble ions are present in high concentrations in soil and sediment from multiple potential sources, including weathering of minerals, inheritance from original deposits, and eolian transport of marine salts and atmospheric dust. We are exploring the usefulness of magnesium isotope variations as an additional constraint on ion provenance and migration. We extracted soluble salts from soil and sediment using three sequential water extractions. Magnesium is purified by removing all other soluble ions present in salt extracts using a series of two different ion exchange resins. Finally, magnesium isotope ratios are determined using a Nu Plasma multi-collector inductively coupled plasma mass spectrometer. We analyzed core samples collected in the 1970s during the Dry Valley Drilling Project (DVDP). Soil salt extracts from Taylor Valley, at low altitude near the Ross Sea, possess magnesium isotope values of -0.87‰ to -1.00‰ δ25MgDSM3 and -0.48‰ to -0.54‰ δ26MgDSM3. These values overlap with published values for modern marine water. Ca/(Na+K) and Mg/(Na+K) ratios in these near marine samples are nearly identical to modern marine water. Samples from Wright Valley, further from the Ross Sea, contain proportionally more Ca and Mg than (Na+K), suggesting an alternate provenance. We plan to analyze the salt extracts from the Wright Valley DVDP core for magnesium isotope ratios to assess variability of salt provenance. Additionally, potential magnesium isotope variation with depth in the core may indicate migration of water and salt below the soil surface.

  12. Effects of temperature and drought manipulations on seedlings of Scots pine provenances.

    PubMed

    Taeger, S; Sparks, T H; Menzel, A

    2015-03-01

    Rising temperatures and more frequent and severe climatic extremes as a consequence of climate change are expected to affect growth and distribution of tree species that are adapted to current local conditions. Species distribution models predict a considerable loss of habitats for Pinus sylvestris. These models do not consider possible intraspecific differences in response to drought and warming that could buffer those impacts. We tested 10 European provenances of P. sylvestris, from the southwestern to the central European part of the species distribution, for their response to warming and to drought using a factorial design. In this common-garden experiment the air surrounding plants was heated directly to prevent excessive soil heating, and drought manipulation, using a rain-out shelter, permitted almost natural radiation, including high light stress. Plant responses were assessed as changes in phenology, growth increment and biomass allocation. Seedlings of P. sylvestris revealed a plastic response to drought by increased taproot length and root-shoot ratios. Strongest phenotypic plasticity of root growth was found for southwestern provenances, indicating a specific drought adaptation at the cost of overall low growth of aboveground structures even under non-drought conditions. Warming had a minor effect on growth but advanced phenological development and had a contrasting effect on bud biomass and diameter increment, depending on water availability. The intraspecific variation of P. sylvestris provenances could buffer climate change impacts, although additional factors such as the adaptation to other climatic extremes have to be considered before assisted migration could become a management option. PMID:25262794

  13. The case for physician assisted suicide: how can it possibly be proven?

    PubMed

    Dahl, E; Levy, N

    2006-06-01

    In her paper, The case for physician assisted suicide: not (yet) proven, Bonnie Steinbock argues that the experience with Oregon's Death with Dignity Act fails to demonstrate that the benefits of legalising physician assisted suicide outweigh its risks. Given that her verdict is based on a small number of highly controversial cases that will most likely occur under any regime of legally implemented safeguards, she renders it virtually impossible to prove the case for physician assisted suicide. In this brief paper, we suggest some ways that may enable us to weigh the risks and benefits of legalisation more fairly and, hopefully, allow us to close the case for physician assisted suicide.

  14. Autoimmune pancreatitis with histologically proven lymphoplasmacytic sclerosing pancreatitis with granulocytic epithelial lesions.

    PubMed

    Ikeura, Tsukasa; Takaoka, Makoto; Uchida, Kazushige; Shimatani, Masaaki; Miyoshi, Hideaki; Kusuda, Takeo; Kurishima, Akiko; Fukui, Yuri; Sumimoto, Kimi; Satoi, Sohei; Ohe, Chisato; Uemura, Yoshiko; Kwon, A-Hon; Okazaki, Kazuichi

    2012-01-01

    Recent histological and clinical studies have suggested the existence of 2 distinct types of autoimmune pancreatitis (AIP): type 1 AIP related to IgG4, exhibiting lymphoplasmacytic sclerosing pancreatitis (LPSP), and type 2 AIP related to granulocyte epithelial lesions (GELs), exhibiting idiopathic duct-centric chronic pancreatitis (IDCP). We herein present a case of type 1 AIP with histologically proven LPSP with GELs. This patient had neither serum IgG4 elevation nor MPD narrowing. In this case, the clinically and histologically atypical findings for type 1 AIP are intriguing. PMID:22466829

  15. Lead isotopes in Southern Ocean marine sediments: implications for paleoclimatic provenance and seawater studies

    NASA Astrophysics Data System (ADS)

    Cook, C. P.; Martin, E. E.

    2014-12-01

    Lead (Pb) isotopes in detrital marine sediments and authigenic oxide coatings have proven useful in reconstructing past changes in continental weathering of glaciated continents and ocean circulation. This approach is under-utilised in the Southern Ocean, despite uncertainties about the evolution of Antarctica's ice sheets and oceanographic changes in this region throughout the Cenozoic. Lead isotopes in sediments are controlled by the mineralogy and age of their bedrock sources, making them an ideal tool to trace changes in Southern Ocean sediment provenance associated with onland erosion patterns (and ice sheet variability), and ocean circulation. However, core-top mapping of Pb isotope signatures of detrital marine sediments in this region is non-existent. We present new Pb isotope data for acid-digested <63µm and bulk Late Holocene sediments from 40 cores located in the East Antarctic sector of Southern Ocean. Results demonstrate that, similar to existing Nd and Sr core-top surveys, distinct provenance sectors can be seen in sediments proximal to the continent, due to the geological characteristics of bedrock sources along the margin. A striking N-S trend is also evident, with distal sediments characterised by less radiogenic isotopic signatures, likely associated with a decrease in radiogenic Pb-bearing minerals with increasing distance from the continental margin. This pattern suggests that Pb isotopes in marine sediments may be useful in reconstructing past provenance trends associated with ice sheet change, and migrations of Southern Ocean frontal positions. In addition, we will present new seawater Pb isotope data from reductive leaching of authigenic coatings of these same sediments, permitting for Late Holocene Pb isotope seawater mapping of the Southern Ocean. To ensure we measured the true seawater signal, we adapted established sequential leaching procedures to minimise detrital contamination, and monitored leachate compositions with Nd isotopes, and

  16. Inferring tectonic provenance of siliciclastic rocks from their chemical compositions: A dissent

    NASA Astrophysics Data System (ADS)

    Basu, Abhijit; Bickford, Marion E.; Deasy, Ryan

    2016-05-01

    Chemical compositions of siliciclastic sedimentary rocks are commonly used to infer their tectonic provenance. We have tested the universal applicability of the underlying principle in a small, but controlled study expecting 100% confirmation of the practice. A comparison is made between the chemical composition of the ~ 1480 Ma Butler Hill Granite in an uplifted cratonic block of the St. Francois Mountain Igneous Complex and that of a small ~ 1-m-thick regolith body, a weathered granite sample, and the basal quartz arenites of the ~ 520 Ma Lamotte Formation immediately above the regolith. The results show that in plots of K2O/Na2O vs. SiO2/Al2O3, the regolith and sandstone samples correctly plot in the Passive Margin field, although the weathered granite plots in the Arc field. In plots of Th-Sc-Zr/10 and La-Th-Sc, the results plot in the Passive and Active Continental Margins and their extensions. In other common plots to discriminate tectonic provenance (e.g., SiO2 vs. K2O/Na2O, Fe2O3 + MgO vs. Al2O3/SiO2, Fe2O3 + MgO vs. TiO2, Sc/Cr vs. La/Y) a few points plot in the Passive Margin field but scatter into and outside of other fields of tectonic provenances. The chondrite-normalized REE distributions show variable degrees of negative Eu anomalies, with flat HREE, conforming to a felsic source. The LREE distributions show both positive and negative Ce anomalies that can be ascribed to the variability of redox conditions during weathering and diagenesis of the original siliciclastic sediments. The variability of the Eu anomaly was likely affected by post-erosion processes in addition to whatever was inherited from the parent rocks. We conclude that chemical compositions can provide good clues, but are neither strong indicators nor unique identifiers of their tectonic provenance. Rather, they indicate a dominantly felsic or dominantly mafic, or a mixed set of source rocks.

  17. [Study on Provenance of Kraak Porcelains from "Nan'ao I" Shipwreck].

    PubMed

    Du, Jing-nan; Chen, Yue; Li, Nai-sheng; Ming, Chao-fang; Zhu, Jian; Luo, Wu-gan

    2015-06-01

    The "Kraak Porcelain" was a kind of Blue and White Porcelain which exported from China to Europe in Ming and Qing period. The study of Kraak Porcelain is a focus issue in international field of porcelain research. In 2007, the discovery of "Nan'ao I" Shipwreck of Ming Dynasty and the porcelains loaded in it, provided precious materials for the research on Kraak Porcelain. In this paper, we explored the provenance of 10 Kraak Porcelain samples from Nan'ao I, using both traditional visual method and WDXRF. PMID:26601402

  18. Rare earth elements in weathering profiles and sediments of Minnesota: Implications for provenance studies

    USGS Publications Warehouse

    Morey, G.B.; Setterholm, D.R.

    1997-01-01

    The relative abundance of rare earth elements in sediments has been suggested as a tool for determining their source rocks. This correlation requires that weathering, erosion, and sedimentation do not alter the REE abundances, or do so in a predictable manner. We find that the rare earth elements are mobilized and fractionated by weathering, and that sediments derived from the weathered materials can display modifications of the original pattern of rare earth elements of some due to grain-size sorting of the weathered material. However, the REE distribution pattern of the provenance terrane can be recognized in the sediments.

  19. Distal myopathy with rimmed vacuoles and inflammation: a genetically proven case.

    PubMed

    Kannan, Meena A; Challa, S; Urtizberea, Andoni J; Krahn, Martin; Jabeen, A S; Borgohain, R

    2012-01-01

    Distal myopathy with rimmed vacuoles (DMRV) is a major entity of distal myopathy. It is an autosomal recessive disorder and is due to mutations in the GNE gene that regulates the synthesis of sialic acid. Although reported predominantly from Japan, cases have been reported from other parts of the world. We report the first genetically proven case of DMRV from India in a 23-year-old male with gradual onset, progressive distal weakness of both lower limbs with features of inflammation in muscle biopsy.

  20. Provenance of the lower Miocene of the Gulf of Mexico from detrital zircon double dating

    NASA Astrophysics Data System (ADS)

    xu, J.

    2013-12-01

    The lower Miocene interval of the Gulf of Mexico (GOM) has recently gained increasing attention from oil and gas industry due to its hydrocarbon potential below the salt canopy. However, it has been less well studied than both the underlying Oligocene and overlying middle Miocene strata. The lower Miocene worldwide is a transitional period of tectonic, climatic, and oceanographic change. In particular, it is a period of major tectonic reorganization in the western interior of North America (Rocky Mountains), involving a shift from the Oligocene thermal phase, with abundant volcanic activity recorded in the thick Frio/Vicksburg succession of the GOM, to the Miocene Basin-Range extensional phase. Climatic conditions also changed from a relatively arid Oligocene to wetter Miocene, resulting in increased sediment yields from exhumed tectonic structures. Previous provenance studies used proportions of quartz, feldspar and lithic fragments and consideration of likely river courses through known paleogeomorphological elements. Only limited detrital zircon (DZ) U-Pb studies on Paleocene strata have been undertaken and there has been no previous U-Pb and (U-Th)/He double dating in the GOM. In this study we apply the latest analytical approaches, such as DZ U-Pb dating to gain robust source terranes ages and more fully elucidate the complex sediment provenance and dispersal history of GOM. We also employ DZ (U-Th)/He (ZHe) dating, combined with DZ U-Pb, to not only define sedimentary provenance but also the exhumation histories of detrital source regions. Samples of lower Miocene outcrop exposures in Texas and Louisiana have been collected to discriminate the varied tectonic and drainage system changes across the basin in lateral. In addition, samples from the Eocene, Oligocene and middle Miocene have been obtained to reveal vertical shift of source terranes contributions. Our initial age data show detrital zircons of lower Miocene sediments come from a wide range of source

  1. [Effects of phosphorus stress on the growth and nitrogen and phosphorus absorption of different Formosan sweet gum provenances].

    PubMed

    Leng, Hua-Ni; Chen, Yi-Tai; Duan, Hong-Ping; Rao, Long-Bing; Wang, Yong-Jun; Hu, Yun-Xue

    2009-04-01

    Aiming at the ecological value of Formosan sweet gum (Liquidambar formosana) as a pioneer species and the status of red soil phosphorus (P) deficiency, a sand culture experiment of split design was conducted to study the responses of three-leaf stage seedlings of seven Formosan sweet gum provenances from Yixing of Jiangsu, Jingxian of Anhui, Yongkang of Zhejiang, Nanchang of Jiangxi, Shaowu of Fujian, Yanping of Fujian, and Nandan of Guangxi to four levels of P (P0, P1/2, P1, P2). With increasing P stress, the biomass and the N and P absorption of test provenances decreased, whereas the utilization efficiency increased. In higher P treatments, the provenances from Nanchang and Yixing had higher biomass and higher N and P absorption but lower utilization efficiency, while the provenance from Nandan had lower N and P absorption but higher utilization efficiency. In lower P treatments, the biomass and the P absorption and utilization efficiency of the provenances from Nanchang and Nandan were all higher. All the results illustrated that the provenances with high biomass had high P absorption at high P level, and had both high P absorption and high utilization efficiency at low P level. The provenance from Nanchang could be considered to be an excellent P stress-resistant provenance, followed by that from Nandan. Phosphorus was not a limiting nutritional factor of Formosan sweet gum, biomass, leaf delta (N/P) ratio and P efficiency could be used as the indicators of P stress-tolerance of Formosan sweet gum provenances.

  2. Defining the “proven technology” technical criterion in the reactor technology assessment for Malaysia’s nuclear power program

    SciTech Connect

    Anuar, Nuraslinda; Kahar, Wan Shakirah Wan Abdul Manan, Jamal Abdul Nasir Abd

    2015-04-29

    Developing countries that are considering the deployment of nuclear power plants (NPPs) in the near future need to perform reactor technology assessment (RTA) in order to select the most suitable reactor design. The International Atomic Energy Agency (IAEA) reported in the Common User Considerations (CUC) document that “proven technology” is one of the most important technical criteria for newcomer countries in performing the RTA. The qualitative description of five desired features for “proven technology” is relatively broad and only provides a general guideline to its characterization. This paper proposes a methodology to define the “proven technology” term according to a specific country’s requirements using a three-stage evaluation process. The first evaluation stage screens the available technologies in the market against a predefined minimum Technology Readiness Level (TRL) derived as a condition based on national needs and policy objectives. The result is a list of technology options, which are then assessed in the second evaluation stage against quantitative definitions of CUC desired features for proven technology. The potential technology candidates produced from this evaluation is further narrowed down to obtain a list of proven technology candidates by assessing them against selected risk criteria and the established maximum allowable total score using a scoring matrix. The outcome of this methodology is the proven technology candidates selected using an accurate definition of “proven technology” that fulfills the policy objectives, national needs and risk, and country-specific CUC desired features of the country that performs this assessment. A simplified assessment for Malaysia is carried out to demonstrate and suggest the use of the proposed methodology. In this exercise, ABWR, AP1000, APR1400 and EPR designs assumed the top-ranks of proven technology candidates according to Malaysia’s definition of “proven technology”.

  3. Neuroimaging Study Designs, Computational Analyses and Data Provenance Using the LONI Pipeline

    PubMed Central

    Dinov, Ivo; Lozev, Kamen; Petrosyan, Petros; Liu, Zhizhong; Eggert, Paul; Pierce, Jonathan; Zamanyan, Alen; Chakrapani, Shruthi; Van Horn, John; Parker, D. Stott; Magsipoc, Rico; Leung, Kelvin; Gutman, Boris; Woods, Roger; Toga, Arthur

    2010-01-01

    Modern computational neuroscience employs diverse software tools and multidisciplinary expertise to analyze heterogeneous brain data. The classical problems of gathering meaningful data, fitting specific models, and discovering appropriate analysis and visualization tools give way to a new class of computational challenges—management of large and incongruous data, integration and interoperability of computational resources, and data provenance. We designed, implemented and validated a new paradigm for addressing these challenges in the neuroimaging field. Our solution is based on the LONI Pipeline environment [3], [4], a graphical workflow environment for constructing and executing complex data processing protocols. We developed study-design, database and visual language programming functionalities within the LONI Pipeline that enable the construction of complete, elaborate and robust graphical workflows for analyzing neuroimaging and other data. These workflows facilitate open sharing and communication of data and metadata, concrete processing protocols, result validation, and study replication among different investigators and research groups. The LONI Pipeline features include distributed grid-enabled infrastructure, virtualized execution environment, efficient integration, data provenance, validation and distribution of new computational tools, automated data format conversion, and an intuitive graphical user interface. We demonstrate the new LONI Pipeline features using large scale neuroimaging studies based on data from the International Consortium for Brain Mapping [5] and the Alzheimer's Disease Neuroimaging Initiative [6]. User guides, forums, instructions and downloads of the LONI Pipeline environment are available at http://pipeline.loni.ucla.edu. PMID:20927408

  4. Provenance of Pliocene clay deposits from the Iberian Atlantic Margin and compositional changes during recycling

    NASA Astrophysics Data System (ADS)

    Dinis, Pedro; Oliveira, Álvaro

    2016-05-01

    The XRD mineralogy and geochemistry of recycled fine-grained deposits from the West Iberia Atlantic Margin are used to establish sediment provenance and evaluate the features that most closely reflect the nature of the source areas and the transformations during the last depositional cycle. A set of Pliocene sediment samples is organized according to grain size distribution, geochemistry, and mineralogy, and their chemical composition is compared with the composition of possible source rocks. Most deposits located to the north of the Mondego River were derived from the uplifted Precambrian metapelites of the basin edge, while to the south of the Mondego River they result mainly from recycling of Cretaceous and Cenozoic clastic units, which, in turn, were derived from Precambrian-Paleozoic granitoids and metasedimentary rocks. This differentiation is supported by several element ratios and biplots involving La, Sm, Gd, Sc, Th, U, Y, Yb, and Zr. For the specific grain size range of the deposits studied, which are mainly made up of silt and clay particles, composition is not substantially affected by the grain size distribution of the sediment. Multi-element diagrams designed to discriminate the tectonic setting and the nature of source rocks are of little use in the interpretation of provenance but help to trace geochemical and mineralogical transformations during the last depositional cycles. Despite the evidence of element leaching during the Pliocene depositional cycle, the geochemical and mineralogical indicators of weathering intensities are largely determined by the nature of the previous cycle units.

  5. Geochemical indicators of provenance and tectonic setting of Mississippian pelites of the Ouachita fold belt

    SciTech Connect

    Totten, M.W. ); Blatt, H.; Weaver, B.L. )

    1992-01-01

    Plate tectonic reconstructions of the southern continental margin of North America during the Paleozoic are inconclusive. Numerous conflicting models have been proposed for the opening and closing of the Iapetus Ocean and the subsequent deposition and deformation of the Ouachita System. Considerable confusion also exists concerning the provenance of the Carboniferous flysch deposits of the Ouachitas. Trace element geochemistry of shales from the Stanley Group constrain both the provenance of the sediments and the plate tectonic setting during the Mississippian evolution of the southern continental margin. Th/Sc and Cr/Th ratios support a cratonic source for the majority of samples analyzed. However, in several samples the Th/Sc ratio decreases and the Cr/Th ratio increases, suggesting a contribution from a more mafic source. Using element ratio-ratio diagrams, all of the samples plot along a curve consistent with a two-component mixing model between a felsic and a mafic source. Both a tantalum-niobium trough and a strongly negative strontium anomaly are seen in upper-crust-normalized trace element spiderdiagrams. These anomalies are also present in interbedded volcaniclastics within the Stanley. The Stanley shales also exhibit a positive vanadium-chromium-nickel anomaly. The pervasive occurrence of these anomalies is interpreted as inherited from their source, and not from diagenetic alteration or sedimentary processes.

  6. Quantifying Sediment Provenance Using Multiple Composite Fingerprints in a Small Watershed in Oklahoma.

    PubMed

    Zhang, X C John; Liu, B L; Liu, B; Zhang, G H

    2016-07-01

    Quantitative information on sediment provenance is needed for improved calibration and validation of process-based soil erosion models. However, sediment source data are often limited due to difficulties in directly measuring source contributions at a watershed scale. Our objectives in this study were to estimate sediment source contributions in a 15-km watershed using analytical solutions to a three end-member mixing model using multiple composite fingerprints and to compare the results with those estimated with a single radionuclide, Cs. Surface soil samples were collected from 23 croplands, 19 rangelands, and 26 gully banks in the watershed, and 31 geochemical elements were analyzed for each sample. The elements served as tracers and were screened using statistical tests and range checks. The mean concentrations of all the nonconflict tracer pairs were used in the mixing model to calculate source contributions for the three sources. Results showed that although source contributions were strongly influenced by topography and land use, gully or subsoil erosion was found to be the main source of fine sediment in most subwatersheds. This study demonstrates that estimated source contributions may vary substantially among different composite fingerprints and that the use of multiple composite fingerprints greatly improves accuracy while reducing uncertainty. The source contributions estimated using multiple composite fingerprints agreed well with those estimated with Cs, with a correlation coefficient of 0.69 for gully contributions. This good agreement increases our confidence in using the multiple composite fingerprint method to identify sediment provenance in relatively small watersheds.

  7. Detrital provenance of Early Mesozoic basins in the Jiangnan domain, South China: Paleogeographic and geodynamic implications

    NASA Astrophysics Data System (ADS)

    Xu, Xianbing; Tang, Shuai; Lin, Shoufa

    2016-04-01

    Detrital provenance analysis is an effective way to understand paleogeographic change and geodynamics. In this paper, we present petrological, whole-rock geochemical and detrital zircon U-Pb geochronological analysis of Early and Middle Jurassic terrestrial clastic rocks in the Jingdezhen Basin and the Huangshan Basin in the Jiangnan domain, South China. Petrology and whole-rock geochemistry show that the source rocks are dominated by intermediate to acid component. The Chemical Index of Alteration ranges from 69 to 86, suggesting a moderate weathering history for the source rocks. The Early-Middle Jurassic sediments in the Jingdezhen and Huangshan basins were mostly sourced from magmatogenic greywackes and felsic magmatic rocks, respectively. Detrital zircons have seven age peaks at ~ 240 Ma, ~ 430 Ma, ~ 1390 Ma, ~ 1880 Ma, ~ 2500 Ma, -3200 Ma and 788-999 Ma (a wide peak). Provenance analysis indicates that the source rocks are in the Jiangnan domain, the Northwest Zhejiang Basin and the Wuyishan domain. Combining these with previous results and paleocurrent directions, we infer that the NE-trending Wuyishan and Xuefengshan domains and the nearly E-W-Jiangnan domain and Nanling tectonic belt were orogenic uplifts and watersheds during the Late Triassic to Middle Jurassic. The Early Mesozoic geodynamics in the South China Block was related to the westward subduction of the Paleo-Pacific Plate and the northward continent-continent collision following the closure of the Paleo-Tethys Ocean.

  8. Controls on Quaternary Sediment Erosion and Provenance in the Himalayan Rain Shadow, Zanskar River, Northwest India

    NASA Astrophysics Data System (ADS)

    Jonell, T. N.; Clift, P. D.; Carter, A.

    2015-12-01

    The Asian Summer Monsoon exerts strong control over erosion in the frontal Himalaya and possibly farther onto the periphery of the Tibetan Plateau in the Himalayan rain shadow. This study evaluates the Zanskar River, a large rain shadow tributary to the Indus River system, to establish how monsoonal precipitation controls erosion patterns, sediment yield, and sediment composition in the Himalayan rain shadow. Bulk sediment petrography and U-Pb detrital zircon ages demonstrate that Zanskar River sands are overwhelmingly dominated by 600-850 Ma zircon, which is consistent with material eroding from Greater Himalayan lithologies. In particular, modern sediment production appears to be heavily concentrated in the wettest and most glaciated subcatchment. River terrace sands indicate that no significant change in the area of sediment production and basin-wide provenance signal has occurred since ~11.5 ka, despite changes in monsoon strength. Variability in subcatchment provenance signals, however, do shift locally with enhanced precipitation around the time of the Monsoon Maximum (10-8 ka). Detrital apatite fission track ages suggest rates of erosion typical for the northwest Indian Himalaya for the last 6.4 M.y. in Zanskar, in spite of the changing monsoonal climate. Together these data indicate most sediment in the Zanskar River is freshly-eroded and transmitted immediately downstream into the Indus River with only modest buffering in terraces.

  9. Lowering the Barriers to Integrative Aquatic Ecosystem Science: Semantic Provenance, Open Linked Data, and Workflows

    NASA Astrophysics Data System (ADS)

    Harmon, T.; Hofmann, A. F.; Utz, R.; Deelman, E.; Hanson, P. C.; Szekely, P.; Villamizar, S. R.; Knoblock, C.; Guo, Q.; Crichton, D. J.; McCann, M. P.; Gil, Y.

    2011-12-01

    Environmental cyber-observatory (ECO) planning and implementation has been ongoing for more than a decade now, and several major efforts have recently come online or will soon. Some investigators in the relevant research communities will use ECO data, traditionally by developing their own client-side services to acquire data and then manually create custom tools to integrate and analyze it. However, a significant portion of the aquatic ecosystem science community will need more custom services to manage locally collected data. The latter group represents enormous intellectual capacity when one envisions thousands of ecosystems scientists supplementing ECO baseline data by sharing their own locally intensive observational efforts. This poster summarizes the outcomes of the June 2011 Workshop for Aquatic Ecosystem Sustainability (WAES) which focused on the needs of aquatic ecosystem research on inland waters and oceans. Here we advocate new approaches to support scientists to model, integrate, and analyze data based on: 1) a new breed of software tools in which semantic provenance is automatically created and used by the system, 2) the use of open standards based on RDF and Linked Data Principles to facilitate sharing of data and provenance annotations, 3) the use of workflows to represent explicitly all data preparation, integration, and processing steps in a way that is automatically repeatable. Aquatic ecosystems workflow exemplars are provided and discussed in terms of their potential broaden data sharing, analysis and synthesis thereby increasing the impact of aquatic ecosystem research.

  10. Chemical composition and mosquito larvicidal activity of essential oils from leaves of different Cinnamomum osmophloeum provenances.

    PubMed

    Cheng, Sen-Sung; Liu, Ju-Yun; Tsai, Kun-Hsien; Chen, Wei-June; Chang, Shang-Tzen

    2004-07-14

    Chemical compositions of leaf essential oils from eight provenances of indigenous cinnamon (Cinnamomum osmophloeum Kaneh.) were compared. According to GC-MS and cluster analyses, the leaf essential oils of the eight provenances and their relative contents were classified into five chemotypes-cinnamaldehyde type, linalool type, camphor type, cinnamaldehyde/cinnamyl acetate type, and mixed type. The larvicidal activities of leaf essential oils and their constituents from the five chemotypes of indigenous cinnamon trees were evaluated by mosquito larvicidal assay. Results of larvicidal tests demonstrated that the leaf essential oils of cinnamaldehyde type and cinnamaldehyde/cinnamyl acetate type had an excellent inhibitory effect against the fourth-instar larvae of Aedes aegypti. The LC(50) values for cinnamaldehyde type and cinnamaldehyde/cinnamyl acetate type against A. aegypti larvae in 24 h were 36 ppm (LC(90) = 79 ppm) and 44 ppm (LC(90) = 85 ppm), respectively. Results of the 24-h mosquito larvicidal assays also showed that the effective constituents in leaf essential oils were cinnamaldehyde, eugenol, anethole, and cinnamyl acetate and that the LC(50) values of these constituents against A. aegypti larvae were <50 ppm. Cinnamaldehyde had the best mosquito larvicidal activity, with an LC(50) of 29 ppm (LC(90) = 48 ppm) against A. aegypti. Comparisons of mosquito larvicidal activity of cinnamaldehyde congeners revealed that cinnamaldehyde exhibited the strongest mosquito larvicidal activity. PMID:15237942

  11. Provenance of Des Moines lobe till records ice-stream catchment evolution during Laurentide deglaciation

    USGS Publications Warehouse

    Lusardi, B.A.; Jennings, C.E.; Harris, K.L.

    2011-01-01

    Mapping and analysis of deposits of the Des Moines lobe of the Laurentide Ice Sheet, active after the Last Glacial Maximum (LGM), reveal several texturally and lithologically distinct tills within what had been considered to be a homogeneous deposit. Although the differences between tills are subtle, minor distinctions are predictable and mappable, and till sheets within the area covered by the lobe can be correlated for hundreds of kilometres parallel to ice flow. Lateral till-sheet contacts are abrupt or overlap in a narrow zone, coincident with a geomorphic discontinuity interpreted to be a shear margin. Till sheets 10 to 20m thick show mixing in their lower 2 to 3m. We suggest that: (i) lithologically distinct till sheets correspond to unique ice-stream source areas; (ii) the sequence of tills deposited by the Des Moines lobe was the result of the evolution and varying dominance of nearby and competing ice streams and their tributaries; and (iii) in at least one instance, more than one ice stream simultaneously contributed to the lobe. Therefore the complex sequence of tills of subtly different provenances, and the unconformities between them record the evolution of an ice-catchment area during Laurentide Ice Sheet drawdown. Till provenance data suggest that, after till is created in the ice-stream source area, the subglacial conditions required for transporting till decline and incorporation of new material is limited. ?? 2011 The Authors. Boreas ?? 2011 The Boreas Collegium.

  12. Mineralogy and provenance of clays in miarolitic cavities of the Pikes Peak Batholith, Colorado

    USGS Publications Warehouse

    Kile, D.E.

    2005-01-01

    Clay samples from 105 cavities within miarolitic granitic pegmatites throughout the Pikes Peak batholith, in Colorado, were analyzed by powder X-ray diffraction (XRD). Smectite (beidellite), illite, and kaolinite were found within the cavities. Calculation of crystallite-thickness distribution (CTD), mean thickness of the crystallites, and variance in crystallite thickness, as deduced from XRD patterns, allowed a determination of provenance and mode of formation for illite and smectite. Authigenic miarolitic-cavity illite and smectite show lognormal CTDs and larger mean thicknesses of crystallites than do their soil-derived counterparts; non-lognormal illite in a cavity results from mixing of cavity and soil illite. Analysis of mean thickness and thickness variance shows that crystal growth of illite is initiated by a nucleation event of short duration, followed by surface-controlled kinetics. Crystallization of the miarolitic cavity clays is presumed to occur by neoformation from hydrothermal fluids. The assessment of provenance allows a determination of regional and local distributions of clay minerals in miarolitic cavities within the Pikes Peak batholith.

  13. Provenance information as a tool for addressing engineered nanoparticle reproducibility challenges

    PubMed Central

    Baer, Donald R.; Munusamy, Prabhakaran; Thrall, Brian D.

    2016-01-01

    Nanoparticles of various types are of increasing research and technological importance in biological and other applications. Difficulties in the production and delivery of nanoparticles with consistent and well defined properties appear in many forms and have a variety of causes. Among several issues are those associated with incomplete information about the history of particles involved in research studies, including the synthesis method, sample history after synthesis, including time and nature of storage, and the detailed nature of any sample processing or modification. In addition, the tendency of particles to change with time or environmental condition suggests that the time between analysis and application is important and some type of consistency or verification process can be important. The essential history of a set of particles can be identified as provenance information and tells the origin or source of a batch of nano-objects along with information related to handling and any changes that may have taken place since it was originated. A record of sample provenance information for a set of particles can play a useful role in identifying some of the sources and decreasing the extent of particle variability and the lack of reproducibility observed by many researchers.

  14. The suitability of the GERDyzer instrument in pH-test-proven laryngopharyngeal reflux patients

    PubMed Central

    Wu, Cheng-Pin; Liang, Wen-Miin; Wang, Chen-Chi; Chang, Chi-Sen; Yeh, Hong-Zen; Hsu, Jeng-Yuan; Ko, Chung-Wang; Lee, Shou-Wu; Chang, Shu-Chuan; Sung, Fung-Chang; Lien, Han-Chung

    2016-01-01

    Abstract The use of validated patient-reported outcome (PRO) instruments for the treatment outcome measure of laryngopharyngeal reflux (LPR) is crucial given the lack of objective markers. However, current symptom-based PRO instruments can only partially capture the impact of LPR. The GERD Analyzer (GERDyzer), an existing disease-specific PRO instrument, which measures multidimensional health-related quality of life (HRQL) affected by the illness rather than by any specific symptoms, has been validated in patients with erosive gastroesophageal reflux disease (GERD). Following the U.S. Food and Drug Administration PRO guidance, we cross-culturally adapted the GERDyzer instrument into Chinese, and examined the qualitative and quantitative psychometric properties of the Chinese version GERDyzer in pH-test-proven LPR patients. The GERDyzer comprises 10 dimensions of HRQL, including general well-being, pain/discomfort, physical health, diet, energy, activities, leisure activities, social life, mood, and sleep. To examine the content validity, we recruited 26 pH-test-proven LPR participants to conduct 4 focus group meetings for direct patient input on clinical manifestations and HRQL impacts. We also tested the quantitative psychometric properties, including reliability, validity, and responsiveness in 100 pH-test-proven LPR patients. Saturation of concept elicitation was achieved from the 4 focus groups, and a strong conceptual match was evident between the GERDyzer contents and responses from the focus group participants. Cognitive debriefing assessment showed that the Chinese version GERDyzer was adequate for use by patients as it demonstrated linguistic validation and cultural harmonization. Quantitative psychometric properties showed evidence of high internal consistency (Cronbach α: 0.96), good to excellent test-retest reliability (intraclass correlation coefficient: 0.84–0.98). Confirmatory factor analysis supported a 2-factor structure. Convergent validity was

  15. Simple approach to sediment provenance tracing using element analysis and fundamental principles

    NASA Astrophysics Data System (ADS)

    Matys Grygar, Tomas; Elznicova, Jitka; Popelka, Jan

    2016-04-01

    Common sediment fingerprinting techniques use either (1) extensive analytical datasets, sometimes nearly complete with respect to accessible characterization techniques; they are processed by multidimensional statistics based on certain statistical assumptions on distribution functions of analytical results and conservativeness/additivity of some components, or (2) analytically demanding characteristics such as isotope ratios assumed to be unequivocal "labels" on the parent material unaltered by any catchment process. The inherent problem of the approach ad (1) is that interpretation of statistical components ("sources") is done ex post and remains purely formal. The problem of the approach ad (2) is that catchment processes (weathering, transport, deposition) can modify most geochemical parameters of soils and sediments, in other words, that the idea that some geochemistry parameters are "conservative" may be idealistic. Grain-size effects and sediment provenance have a joint influence on chemical composition of fluvial sediments that is indeed not easy to distinguish. Attempts to separate those two main components using only statistics seem risky and equivocal, because grain-size dependence of element composition is nearly individual for each element and reflects sediment maturity and catchment-specific formation transport processes. We suppose that the use of less extensive datasets of analytical results and their interpretation respecting fundamental principles should be more robust than only statistic tools applied to overwhelming datasets. We examined sediment composition, both published by other researchers and gathered by us, and we found some general principles, which are in our opinion relevant for fingerprinting: (1) Concentrations of all elements are grain-size sensitive, i.e. there are no "conservative" elements in conventional sense of provenance- or transport-pathways tracing, (2) fractionation by catchment processes and fluvial transport changes

  16. Quantitative models of sediment generation and provenance: State of the art and future developments

    NASA Astrophysics Data System (ADS)

    Weltje, Gert Jan

    2012-12-01

    An overview of quantitative approaches to analysis and modelling of sediment generation and provenance is presented, with an emphasis on major framework components as determined by means of petrographic techniques. Conceptual models of sediment provenance are shown to be consistent with two classes of numerical-statistical models, i.e. linear mixing models and compositional linear models. These cannot be placed within a common mathematical framework, because the former requires that sediment composition is expressed in terms of proportions, whereas the latter requires that sediment composition is expressed in terms of log-ratios of proportions. Additivity of proportions, a fundamental assumption in linear mixing models, cannot be readily expressed in log-ratio terms. Linear mixing models may be used to describe compositional variability in terms of physical and conceptual (un)mixing. Models of physical (un)mixing are appropriate for describing compositional variation within transport-invariant subpopulations of grains as a result of varying rates of supply of detritus from multiple sources. Conceptual (un)mixing governs the relations among chemical, mineralogical and petrographic characteristics of sediments, which represent different descriptive levels within a compositional hierarchy. Compositional linear process models may be used to describe compositional and/or textural evolution resulting from selective modifications induced by sediment transport, as well as chemical and mechanical weathering. Current approaches to modelling of surface processes treat the coupled evolution of source areas and sedimentary basins in terms of bulk mass transfer only, and do not take into account compositional and textural sediment properties. Moving from the inverse modelling approach embodied in provenance research to process-based forward models of sediment generation which provide detailed predictions of sediment properties meets with considerable (albeit not insurmountable

  17. Syn-Uralian orogenic heavy mineral provenance analysis from southeastern Taimyr, Arctic Russia

    NASA Astrophysics Data System (ADS)

    Zhang, X.; Pease, V.; Scott, R. A.

    2012-12-01

    The Taimyr peninsula is on the northern margin of the Siberian craton and divides into the southern, central and northern NE - SW trending domains. The southern Taimyr domain represents the passive margin of Siberia and is dominated by a Paleozoic, extending into the early Mesozoic, succession. The central Taimyr domain accreted to the southern domain during Late Precambrian time, followed by collision with the northern Taimyr domain of Baltican affinity during the Late Paleozoic as part of Uralian orogenesis. The Carboniferous - Permian sedimentary succession, which was deposited during the later stage of Uralian Orogeny, can provide crucial information about the extent of contemporaneous Uralian orogensis and its influence on the tectonic evolution of southern Taimyr. Three Carboniferous - Permian samples from southeastern Taimyr were analyzed for petrography and heavy mineral analysis to define their sedimentary and provenance characteristics. The Upper Carboniferous to Lower Permian sample (VP10-25, Turuzovskya Formation, C2-P1tr), the Lower Permian sample (VP10-14, Sokolinskaya Formation, P1sk) and the Upper Permian sample (VP10-12, Baykurskaya Formation, P2bk)) classify as subarkose, lithic arkose and feldspathic litharenite, respectively- they record decreasing sediment maturity through time. While all the samples represent a 'recycled orogen' source based on QtFL plots, the C2-P1tr sample represents a recycled quartzite, while the P1sk sample plots within the mixed field, and the P2bk sample is transitional on QmFLt plots. According to the heavy mineral analysis results, the C2-P1tr sample and P1sk sample show great similarity in heavy mineral assemblage, dominated by zircon, apatite and rutile. The P2bk sample shows distinct differences, containing apatite, tourmaline, garnet and zircon. The prominent increase of garnet suggests a metamorphic source. These similarities and variations among the three samples are also shown in other discrimination diagrams

  18. Provenance and depositional conditions of Cretaceous-Paleogene boundary sandstones from northeastern Mexico

    NASA Astrophysics Data System (ADS)

    Rehrmann, Stephanie; Augustsson, Carita; Izaguirre Valdez, Rocio Nereyda; Jenchen, Uwe; Schulte, Peter

    2012-12-01

    We compare Late Maastrichtian siliciclastic sandstone in northeastern Mexico with those representing the Cretaceous-Paleogene (K-Pg) boundary to reveal differences in provenance and depositional conditions between background sedimentation and K-Pg sand. Lithology and compositional variations are presented for the deep-water Burgos Basin and the shallow-water La Popa Basin. The Late Maastrichtian sandstones in the Burgos Basin have sharp lower contacts, contain abundant trace fossils and are separated by meter-thick marl layers. They represent sporadic mass flows from coastal areas separated by long phases of hemipelagic sedimentation. The K-Pg sandstone layers are amalgamated, contain thin marl intercalations only in the uppermost part and trace fossils are present in the top sandstone layer only. Also this succession represents mass-flow deposits, but the sand may have been deposited during a very short period. The La Popa Basin sandstones represent deltaic sedimentation interrupted by submarine channel deposition during the K-Pg boundary transition with abundant rip-up clasts and bioclasts at the base. The sandstones of the Burgos Basin are quartz to akosic wacke dominated by quartz (> 90%) and some feldspar (< 10%) in calcite cement and matrix. Lithic fragments are rare and dominated by chert and bioclasts. Ultra-stable heavy minerals (ZTR = 50-80) and plutonic quartz grains (ca. 40% of the total quartz population) are particularly common in the K-Pg sandstones. In the Maastrichtian sandstones, metamorphic heavy minerals, particularly chlorite, clinozoisite, and tourmaline (20-50% of the heavy mineral population), and metamorphic quartz (80% of the quartz population) have higher abundances. The La Popa sandstones are subarkose to arkose and arkosic wacke and have a high abundance of feldspar (15-30%) and lithic fragments (5-20%), mainly of siltstone and carbonate. The sandstones from both basins have chemical compositions typical for recycling (Zr/Sc = 12-27 and

  19. The suitability of the GERDyzer instrument in pH-test-proven laryngopharyngeal reflux patients.

    PubMed

    Wu, Cheng-Pin; Liang, Wen-Miin; Wang, Chen-Chi; Chang, Chi-Sen; Yeh, Hong-Zen; Hsu, Jeng-Yuan; Ko, Chung-Wang; Lee, Shou-Wu; Chang, Shu-Chuan; Sung, Fung-Chang; Lien, Han-Chung

    2016-08-01

    The use of validated patient-reported outcome (PRO) instruments for the treatment outcome measure of laryngopharyngeal reflux (LPR) is crucial given the lack of objective markers. However, current symptom-based PRO instruments can only partially capture the impact of LPR. The GERD Analyzer (GERDyzer), an existing disease-specific PRO instrument, which measures multidimensional health-related quality of life (HRQL) affected by the illness rather than by any specific symptoms, has been validated in patients with erosive gastroesophageal reflux disease (GERD). Following the U.S. Food and Drug Administration PRO guidance, we cross-culturally adapted the GERDyzer instrument into Chinese, and examined the qualitative and quantitative psychometric properties of the Chinese version GERDyzer in pH-test-proven LPR patients.The GERDyzer comprises 10 dimensions of HRQL, including general well-being, pain/discomfort, physical health, diet, energy, activities, leisure activities, social life, mood, and sleep. To examine the content validity, we recruited 26 pH-test-proven LPR participants to conduct 4 focus group meetings for direct patient input on clinical manifestations and HRQL impacts. We also tested the quantitative psychometric properties, including reliability, validity, and responsiveness in 100 pH-test-proven LPR patients.Saturation of concept elicitation was achieved from the 4 focus groups, and a strong conceptual match was evident between the GERDyzer contents and responses from the focus group participants. Cognitive debriefing assessment showed that the Chinese version GERDyzer was adequate for use by patients as it demonstrated linguistic validation and cultural harmonization. Quantitative psychometric properties showed evidence of high internal consistency (Cronbach α: 0.96), good to excellent test-retest reliability (intraclass correlation coefficient: 0.84-0.98). Confirmatory factor analysis supported a 2-factor structure. Convergent validity was confirmed by

  20. Deglacial Dust Provenance Changes in the Eastern Equatorial Pacific and Implications for ITCZ Movement

    NASA Astrophysics Data System (ADS)

    Xie, R.; Marcantonio, F.

    2009-12-01

    The provenance of the eolian dust component of deep-sea sediments has the potential to offer insights into changes in past atmospheric circulation patterns. Measuring temporal changes in dust provenance can shed more light on changes in the position of the Intertropical Convergence Zone (ITCZ), a region in which dust is removed from the upper troposphere by deep convection and scavenged by precipitation. The ITCZ should, therefore, act as a barrier separating wind-blown northern versus southern sources. Perhaps the best way to trace for provenance of dust sources is through the measurement of radiogenic isotope ratios. Here, we have analyzed Nd, Sr, and Pb isotope ratios in the detrital components extracted from deep-sea sediments in the eastern equatorial Pacific (EEP) along a meridional transect at 110W from 3S to 7N (ODP Leg 138, Sites 848 - 853). At each site, the sediments ranged in age from 0 to 25 ka. Detrital component extraction involved the chemical removal of the biogenic and authigenic sedimentary fractions. Preliminary detrital Nd isotope ratios show a range of 2.4 ɛNd units (from -5.7 to -3.3). There are distinct latitudinal trends in the ɛNd values, with more radiogenic values further south and less radiogenic values further north. This distinction holds true for both Holocene and glacial time. The difference in Nd isotope ratios at any one site between Holocene and glacial is smaller for the sites furthest North. The greatest Holocene-glacial differences in ɛNd occur at sites south of 3N, suggesting a distinct detrital component boundary at this latitude. The sites furthest north (7N and 5.29N) show the greatest variability in detrital 87Sr/86Sr isotope ratios, while sites furthest south (equator and 1.5N) show negligible variability. The detrital component of sediment at Site 851 (2.77N) has a Sr isotope variability that is intermediate between the northern and southern values, again suggesting a detrital boundary of some sort. We interpreted

  1. Responses to mild water deficit and rewatering differ among secondary metabolites but are similar among provenances within Eucalyptus species.

    PubMed

    McKiernan, Adam B; Potts, Brad M; Brodribb, Timothy J; Hovenden, Mark J; Davies, Noel W; McAdam, Scott A M; Ross, John J; Rodemann, Thomas; O'Reilly-Wapstra, Julianne M

    2016-02-01

    Water deficit associated with drought can severely affect plants and influence ecological interactions involving plant secondary metabolites. We tested the effect of mild water deficit and rewatering on physiological, morphological and chemical traits of juvenile Eucalyptus globulus Labill. and Eucalyptus viminalis Labill. We also tested if responses of juvenile eucalypts to water deficit and rewatering varied within species using provenances across a rainfall gradient. Both species and all provenances were similarly affected by mild water deficit and rewatering, as only foliar abscisic acid levels differed among provenances during water deficit. Across species and provenances, water deficit decreased leaf water potential, above-ground biomass and formylated phloroglucinol compound concentrations, and increased condensed tannin concentrations. Rewatering reduced leaf carbon : nitrogen, and total phenolic and chlorogenic acid concentrations. Water deficit and rewatering had no effect on total oil or individual terpene concentrations. Levels of trait plasticity due to water deficit and rewatering were less than levels of constitutive trait variation among provenances. The overall uniformity of responses to the treatments regardless of native provenance indicates limited diversification of plastic responses when compared with the larger quantitative variation of constitutive traits within these species. These responses to mild water deficit may differ from responses to more extreme water deficit or to responses of juvenile/mature eucalypts growing at each locality.

  2. Responses to mild water deficit and rewatering differ among secondary metabolites but are similar among provenances within Eucalyptus species.

    PubMed

    McKiernan, Adam B; Potts, Brad M; Brodribb, Timothy J; Hovenden, Mark J; Davies, Noel W; McAdam, Scott A M; Ross, John J; Rodemann, Thomas; O'Reilly-Wapstra, Julianne M

    2016-02-01

    Water deficit associated with drought can severely affect plants and influence ecological interactions involving plant secondary metabolites. We tested the effect of mild water deficit and rewatering on physiological, morphological and chemical traits of juvenile Eucalyptus globulus Labill. and Eucalyptus viminalis Labill. We also tested if responses of juvenile eucalypts to water deficit and rewatering varied within species using provenances across a rainfall gradient. Both species and all provenances were similarly affected by mild water deficit and rewatering, as only foliar abscisic acid levels differed among provenances during water deficit. Across species and provenances, water deficit decreased leaf water potential, above-ground biomass and formylated phloroglucinol compound concentrations, and increased condensed tannin concentrations. Rewatering reduced leaf carbon : nitrogen, and total phenolic and chlorogenic acid concentrations. Water deficit and rewatering had no effect on total oil or individual terpene concentrations. Levels of trait plasticity due to water deficit and rewatering were less than levels of constitutive trait variation among provenances. The overall uniformity of responses to the treatments regardless of native provenance indicates limited diversification of plastic responses when compared with the larger quantitative variation of constitutive traits within these species. These responses to mild water deficit may differ from responses to more extreme water deficit or to responses of juvenile/mature eucalypts growing at each locality. PMID:26496959

  3. Cheminformatics and the Semantic Web: adding value with linked data and enhanced provenance

    PubMed Central

    Frey, Jeremy G; Bird, Colin L

    2013-01-01

    Cheminformatics is evolving from being a field of study associated primarily with drug discovery into a discipline that embraces the distribution, management, access, and sharing of chemical data. The relationship with the related subject of bioinformatics is becoming stronger and better defined, owing to the influence of Semantic Web technologies, which enable researchers to integrate heterogeneous sources of chemical, biochemical, biological, and medical information. These developments depend on a range of factors: the principles of chemical identifiers and their role in relationships between chemical and biological entities; the importance of preserving provenance and properly curated metadata; and an understanding of the contribution that the Semantic Web can make at all stages of the research lifecycle. The movements toward open access, open source, and open collaboration all contribute to progress toward the goals of integration. PMID:24432050

  4. The provenance of garnet: constraints provided by studies of coastal sediments from southern India

    NASA Astrophysics Data System (ADS)

    Sabeen, H. M.; Ramanujam, N.; Morton, Andrew C.

    2002-10-01

    The provenance of sediment with heavy mineral suites containing garnets with low-grossular and high-pyrope contents is enigmatic. Such garnet assemblages characterise sediments in many basins worldwide. They are especially common in the sedimentary basins around northern Britain, but their source cannot be identified in adjacent basement rocks. This paper documents garnet populations in beach, dune and river sands from southern India, which almost exclusively comprise low-grossular, high-pyrope garnets. These are derived from the high-grade (granulite facies) metasedimentary and charnockitic rocks that form the basement in this area. By analogy, similar lithologies are inferred to source sediments with low-grossular, high-pyrope garnet assemblages seen elsewhere. In the case of the sandstones of northern Britain, the most likely location of such material is considered to be Greenland.

  5. Potential of Sr isotopic analysis in ceramic provenance studies: Characterisation of Chinese stonewares

    NASA Astrophysics Data System (ADS)

    Li, Bao-Ping; Zhao, Jian-Xin; Greig, Alan; Collerson, Kenneth D.; Zhuo, Zhen-Xi; Feng, Yue-Xin

    2005-11-01

    We compare the trace element and Sr isotopic compositions of stoneware bodies made in Yaozhou and Jizhou to characterise these Chinese archaeological ceramics and examine the potential of Sr isotopes in provenance studies. Element concentrations determined by ICP-MS achieve distinct characterisation for Jizhou samples due to their restricted variation, yet had limited success with Yaozhou wares because of their large variability. In contrast, 87Sr/86Sr ratios in Yaozhou samples have a very small variation and are all significantly lower than those of Jizhou samples, which show a large variation and cannot be well characterised with Sr isotopes. Geochemical interpretation reveals that 87Sr/86Sr ratios will have greater potential to characterise ceramics made of low Rb/Sr materials such as kaolin clay, yet will show larger variations in ceramics made of high Rb/Sr materials such as porcelain stone.

  6. Provenance study of rubies from a Parthian statuette by PIXE analysis

    NASA Astrophysics Data System (ADS)

    Calligaro, T.; Mossmann, A.; Poirot, J.-P.; Querré, G.

    1998-03-01

    The aim of this work was the characterization of three red inlays of a Parthian statuette (3rd century B.C.) originating from Babylon, Mesopotamia. The external beam setup of AGLAE was used in order to determine the chemical composition of the inlays. PIXE analysis confirmed the expected nature of the cabochons: ruby, and not colored glass as previously reported. According to these results, this archaeological object contains one of the oldest rubies left today. Moreover, quantitative analysis of trace elements allowed us to infer the geographic origin of these gems. PIXE analyses of a batch of 57 rubies from nine well-known sources were carried out in order to establish a geochemical database. The use of multivariate statistical methods enables us to restrict the possible provenance to either Ceylon (Sri Lanka) or more likely Burma (Myanmar).

  7. ILP, the Blind, and the Elephant: Euclidean Embedding of Co-proven Queries

    NASA Astrophysics Data System (ADS)

    Schulz, Hannes; Kersting, Kristian; Karwath, Andreas

    Relational data is complex. This complexity makes one of the basic steps of ILP difficult: understanding the data and results. If the user cannot easily understand it, he draws incomplete conclusions. The situation is very much as in the parable of the blind men and the elephant that appears in many cultures. In this tale the blind work independently and with quite different pieces of information, thereby drawing very different conclusions about the nature of the beast. In contrast, visual representations make it easy to shift from one perspective to another while exploring and analyzing data. This paper describes a method for embedding interpretations and queries into a single, common Euclidean space based on their co-proven statistics. We demonstrate our method on real-world datasets showing that ILP results can indeed be captured at a glance.

  8. Close or not so close? Provenance studies of megalithic monuments from Alentejo (Portugal)

    NASA Astrophysics Data System (ADS)

    Boaventura, R.; Moita, P.

    2012-04-01

    There has been a significant amount of studies about megalithic tombs conducted in the Alentejo region. However the geological provenance of monoliths used in the construction of those tombs usually was not a priority among researchers with rare exceptions (Dehn, Kalb and Vortisch, 1991; Boaventura, 2000). Recent studies of dolmens (Oliveira, 1997 and 2006; Gonçalves, 2003) refer only to a brief characterization of rocks, such as "granite or schist slabs", highlighting certain types if the geological stratum is identical or not to the stone blocks. On the other hand, when the type of raw material appears to be similar with the bedrock, it is common and empirically assumed its local provenance. With the aim of testing and expand the knowledge about the provenance of the slabs used in the construction of megalithic tombs, several lithic samples from dolmen slabs and outcrops in their surroundings were collected for analysis and comparison. The samples were characterized by petrographic studies in thin section as well with a geochemical analyses performed by XRF that gives major elements as well some trace elements. The dolmens tested for this project are located roughly between the northeast to west of the town of Monforte (Upper region of Alentejo, Portugal) and are named, from south to north, as Serrinha, Rabuje group (1 to 5), Geodésico de Besteiros 3 and Velho. The field work and petrographic studies revealed that the slabs are constituted mainly by several types of granitoids (gnaissic, red, white, tonalitic), amphibolites and mottled schist shale. The comparison of chemical analyses between slabs and selected outcrops revealed that the provenances are in most of the cases from the nearby geological stratum. In fact, major elements (e.g. MgO, SiO2, CaO) as well trace elements (e.g. Sr, Y, Zr, Nb) compositions are similar on slab samples and in rocks from the outcrops. If in terms of major elements a similarity was already expectable, or easier to obtain, the

  9. Distribution and provenance of lunar highland rock types at North Ray Crater, Apollo 16

    NASA Astrophysics Data System (ADS)

    Stoeffler, D.; Ostertag, R.; Borchardt, R.; Malley, J.; Rehfeldt, A.; Reimold, W. U.

    In connection with its selenographic setting in the central lunar highlands, the Apollo 16 landing site in the Descartes area is highly important as a prime sampling area for rocks which formed as part of the primordial crust and as a key location for the analysis of the deformation and transport of crustal material by impact processes. The present investigation is concerned with the North Ray crater, which is located on the N-S running boundary between the smooth Cayley plains to the west and the Descartes mountains to the east. Attention is given to aspects of selenography and location of samples, the ejecta distribution of post-Cayley impact craters, sample classification, the frequency distribution of rock types in the North Ray Crater ejecta, an interpretation of compositional and age data, a model of the target stratigraphy and excavation of North Ray Crater, and implications for the emplacement and provenance of North Ray target rocks.

  10. Capturing Provenance, Evolution and Modification of Clinical Protocols via a Heterogeneous, Semantic Social Network.

    PubMed

    Portokallidis, Nick; Drosatos, George; Kaldoudi, Eleni

    2016-01-01

    Healthcare delivery is largely based on medical best practices as in clinical protocols. Research so far has addressed the computerized execution of clinical protocols by developing a number of related representation languages, execution engines and integrated platforms to support real time execution. However, much less effort has been put into organizing clinical protocols for use and reuse. In this paper we propose a heterogeneous semantic social network to describe and organize clinical protocols based on their provenance, evolution and modifications. The proposed approach allows semantic tagging and enrichment of clinical protocols so that they can be used and re-used across platforms and also be linked directly to other relevant scientific information, e.g. published works in PubMed or personal health records, and other clinical information systems. PMID:27332270

  11. Proven, long-life hydrogen/oxygen thrust chambers for space station propulsion

    NASA Technical Reports Server (NTRS)

    Richter, G. Paul; Price, Harold G.

    1986-01-01

    A 25 lb sub f hydrogen/oxygen thruster has been developed and proven as a viable candidate to meet the needs of the Space Station Program. Likewise, a 50 lb sub f hydrogen/oxygen thrust chamber has been developed and has demonstrated reliable, long-life expectancy at anticipated Space Station operating conditions. Both these thrust chambers were based on design criteria developed in previous thruster programs. Extensive thermal analysis and models were used to design the thrusters to achieve total impulse goals of 2 million lb sub f sec. Test data from each thruster are compared to the analytical predictions for the performance and heat transfer characteristics. Also, the results of thrust chamber life verification tests are presented.

  12. Gold Provenance Studies for Romanian Archaeological Objects Using Micro-SR-XRF

    SciTech Connect

    Vasilescu, Angela; Constantinescu, Bogdan; Bugoi, Roxana; Radtke, Martin; Reinholz, Uwe; Simon, Rolf

    2010-04-06

    Studies by Synchrotron Radiation--X-Ray Fluorescence (SR-XRF) for the search of the presence of trace elements like Sb, Sn, Te and Pb in archaeological metallic objects found on the territory of Romania--old coins and Bronze Age jewelry, aimed to determine the provenance of the gold used in their manufacture. The results are compared with the detailed elemental composition of alluvial or primary gold samples, obtained by the same technique. This work attempted to establish the origin of the gold used for the mint of two different types of koson coins. We found that the kosons with monogram are made of refined gold, while the one used for the kosons without monogram is mainly alluvial. The gold used in the manufacture of the Calarasi Vulchitrun-type disk and the Tauteu hair ring is also of alluvial origin.

  13. Gold Provenance Studies for Romanian Archaeological Objects Using Micro-SR-XRF

    NASA Astrophysics Data System (ADS)

    Vasilescu, Angela; Constantinescu, Bogdan; Bugoi, Roxana; Radtke, Martin; Reinholz, Uwe; Simon, Rolf

    2010-04-01

    Studies by Synchrotron Radiation—X-Ray Fluorescence (SR-XRF) for the search of the presence of trace elements like Sb, Sn, Te and Pb in archaeological metallic objects found on the territory of Romania—old coins and Bronze Age jewelry, aimed to determine the provenance of the gold used in their manufacture. The results are compared with the detailed elemental composition of alluvial or primary gold samples, obtained by the same technique. This work attempted to establish the origin of the gold used for the mint of two different types of koson coins. We found that the kosons with monogram are made of refined gold, while the one used for the kosons without monogram is mainly alluvial. The gold used in the manufacture of the Calarasi Vulchitrun-type disk and the Tauteu hair ring is also of alluvial origin.

  14. An Approach to Evaluate Scientist Support in Abstract Workflows and Provenance Traces

    SciTech Connect

    Salayandia, Leonardo; Gates, Ann Q.; Pinheiro da Silva, Paulo

    2012-11-02

    Abstract workflows are useful to bridge the gap between scientists and technologists towards using computer systems to carry out scientific processes. Provenance traces provide evidence required to validate results and support their reuse. Assuming both technologies are based on formal semantics, a knowledge-based system that consistently merges both technologies is useful for scientists that produce data to document their data collecting and transformation processes; it is also useful for scientists that reuse data to assess scientific processes and resulting datasets produced by others. While evaluation of each technology is necessary for a given application, this work discusses their combined evaluation. The claim is that both technologies should complement each other and align consistently to a scientist’s perspective in order to be effective for science. Evaluation criteria are proposed based on lessons learned and exemplified for discussion.

  15. Resilience of the Asian atmospheric circulation shown by Paleogene dust provenance

    PubMed Central

    Licht, A.; Dupont-Nivet, G.; Pullen, A.; Kapp, P.; Abels, H. A.; Lai, Z.; Guo, Z.; Abell, J.; Giesler, D.

    2016-01-01

    The onset of modern central Asian atmospheric circulation is traditionally linked to the interplay of surface uplift of the Mongolian and Tibetan-Himalayan orogens, retreat of the Paratethys sea from central Asia and Cenozoic global cooling. Although the role of these players has not yet been unravelled, the vast dust deposits of central China support the presence of arid conditions and modern atmospheric pathways for the last 25 million years (Myr). Here, we present provenance data from older (42–33 Myr) dust deposits, at a time when the Tibetan Plateau was less developed, the Paratethys sea still present in central Asia and atmospheric pCO2 much higher. Our results show that dust sources and near-surface atmospheric circulation have changed little since at least 42 Myr. Our findings indicate that the locus of central Asian high pressures and concurrent aridity is a resilient feature only modulated by mountain building, global cooling and sea retreat. PMID:27488503

  16. Beyond Magnetism: a Short History of Obsidian Provenance Studies and Magnetic Personalities (Invited)

    NASA Astrophysics Data System (ADS)

    Shackley, S.

    2010-12-01

    For many decades now, geologists and archaeologists have been analyzing archaeological obsidian using a spate of techniques. No single technology, however, can solve all of the chemical, petrological, or archaeological problems that arise from this disordered substance. The future is indistinct for obsidian studies with the rising use and misuse of portable XRF (PXRF) and ICP-MS, the apparent decline of the use of neutron activation (NAA), continual misuse of megascopic source assignment, and the maturation of laboratory x-ray fluorescence spectrometry (XRF). Magnetic property analysis of obsidian is yet another tool for the understanding of source provenance and may very well become a tool that fills a gap in our analytical repertoire. This discussion is designed to provide historical context for this resurrected technique and serve as a reminder that we don’t always know what we know in geoarchaeological science.

  17. Resilience of the Asian atmospheric circulation shown by Paleogene dust provenance.

    PubMed

    Licht, A; Dupont-Nivet, G; Pullen, A; Kapp, P; Abels, H A; Lai, Z; Guo, Z; Abell, J; Giesler, D

    2016-01-01

    The onset of modern central Asian atmospheric circulation is traditionally linked to the interplay of surface uplift of the Mongolian and Tibetan-Himalayan orogens, retreat of the Paratethys sea from central Asia and Cenozoic global cooling. Although the role of these players has not yet been unravelled, the vast dust deposits of central China support the presence of arid conditions and modern atmospheric pathways for the last 25 million years (Myr). Here, we present provenance data from older (42-33 Myr) dust deposits, at a time when the Tibetan Plateau was less developed, the Paratethys sea still present in central Asia and atmospheric pCO2 much higher. Our results show that dust sources and near-surface atmospheric circulation have changed little since at least 42 Myr. Our findings indicate that the locus of central Asian high pressures and concurrent aridity is a resilient feature only modulated by mountain building, global cooling and sea retreat. PMID:27488503

  18. Resilience of the Asian atmospheric circulation shown by Paleogene dust provenance

    NASA Astrophysics Data System (ADS)

    Licht, A.; Dupont-Nivet, G.; Pullen, A.; Kapp, P.; Abels, H. A.; Lai, Z.; Guo, Z.; Abell, J.; Giesler, D.

    2016-08-01

    The onset of modern central Asian atmospheric circulation is traditionally linked to the interplay of surface uplift of the Mongolian and Tibetan-Himalayan orogens, retreat of the Paratethys sea from central Asia and Cenozoic global cooling. Although the role of these players has not yet been unravelled, the vast dust deposits of central China support the presence of arid conditions and modern atmospheric pathways for the last 25 million years (Myr). Here, we present provenance data from older (42-33 Myr) dust deposits, at a time when the Tibetan Plateau was less developed, the Paratethys sea still present in central Asia and atmospheric pCO2 much higher. Our results show that dust sources and near-surface atmospheric circulation have changed little since at least 42 Myr. Our findings indicate that the locus of central Asian high pressures and concurrent aridity is a resilient feature only modulated by mountain building, global cooling and sea retreat.

  19. Paleocurrent, petrography and provenance analyses of the Ajali Sandstone (Upper Cretaceous), southeastern Benue Trough, Nigeria

    NASA Astrophysics Data System (ADS)

    Amajor, L. C.

    1987-09-01

    Paleocurrent, petrographic and heavy-mineral analyses of the Ajali Sandstone (Late Cretaceous) in southeastern Nigeria show that the sedimentary rocks on the Santonian Okigwe-Abakaliki anticlinorium provided the major detritus, whereas minor contributions of the eastern Precambrian basement block (Oban massif) are confined along a narrow belt southeast of Alayi in the Afikpo Basin. The sandstones derived from the major sedimentary source are quartz arenites characterized by a zircon-tourmaline heavy-mineral assemblage and a radial paleocurrent pattern which parallels the paleoslope of the provenance. On the other hand, those sands generated from the eastern basement block are arkose and sub-arkose dominated by a garnet-apatite-rutile heavy-mineral assemblage and southwesterly directed paleocurrent modes. The results of this study support the previous hypothesis that most ancient quartz arenites are multicycle in origin.

  20. Provenance determination of Vinica terra cotta icons using self-organising maps.

    PubMed

    Tanevska, Vinka; Kuzmanovski, Igor; Grupce, Orhideja

    2007-07-01

    In the Vinica Fortress, Republic of Macedonia, 50 undamaged terra cotta icons and 100 fragments, all dated 6th-7th century, were found. In order to determine the provenance of these unique terra cotta icons, the mass fractions of 19 different chemical elements were previously determined in ten fragments of the terra cotta icons and thirty three samples of clays from eight different sites from the region. Due to the dimensionality and complexity of the experimental data, the archaeometric results were treated with self-organising maps (SOM). The results obtained using SOM were compared with the ones obtained using principal component analysis. Both chemometric methods revealed that Vinica terra cotta icons were made from clay from Grncarka, 2.5 km South-East from the Vinica Fortress.

  1. Is One Style of Early Behavioral Treatment for Autism 'Scientifically Proven?'

    PubMed Central

    Gernsbacher, Morton Ann

    2014-01-01

    Within the field of autism spectrum disorder, the attribute "scientifically proven' it moil commonly urn in reference to the results of early behavioral treatment, and in particular, one style of early behavioral treatment. In this brief article, such claims are evaluated. Concerns raised by other researchers about the methodology of the original Lovaas (1987) study are briefly summarized. A particular concern that has been raised repeatedly u the loch of random assignment of participants to treatment versus control group. A more recent study (Smith, Groen, & Wynn, ZOOO), which included the necessary random assignment of participants to treatment versus control group and assessed multiple outcome measures, is reviewed. The results of the Smith et al. (ZOOO) study with random assignment appear to be less dramatic than the results from the original Lovaas (1987) study. PMID:25520761

  2. Provenance of the Pendales Fm in the Sinu-San Jacinto Basin of Colombia's Caribbean margin

    NASA Astrophysics Data System (ADS)

    Abreu, A.; Schonwalder, D.; Jaramillo, J.; Martens, U.

    2009-12-01

    Petrography of the Pendales Formation at Arroyo Henequén (Atlantico) revealed that conglomeratic lithoarenites and polymictic conglomerates contain detrital quartz, potassium feldspars, plagioclase, serpentinite, chert, epidote, tourmaline, actinolite and volcanic rock fragments. This composition indicates provenance from two sources, one mainly composed of ocean floor materials, and another composed of granites. Twenty U-Pb ages of detrital zircon form a single population ranging 80-65 Ma. This age is interpreted to reflect the time of magmatism of the granitic source. Taking into account paleogeographic reconstructions, the most likely source was the Leeward Antilles Arc. We propose that Pendales Formation was derived from a recycled orogen uplifted by the Pre-Andean orogeny during the Middle Eocene.

  3. Features of Scots pine radial growth in conditions of provenance trial

    NASA Astrophysics Data System (ADS)

    Kuzmin, S.

    2012-12-01

    Provenance trial of Scots pine in Boguchany forestry of Krasnoyarsk krai is conducted on two different soils - dark-grey loam forest soil and sod-podzol sandy soil. Complex of negative factors for plant growth and development appears in dry conditions of sandy soil. It could results in decrease of resistance to diseases. Sandy soils in different climatic zones have such common traits as low absorbing capacity, poorness of elemental nutrition, low microbiological activity and moisture capacity, very high water permeability. But Scots pine trees growing in such conditions could have certain advantages and perspectives of use. In the scope of climate change (global warming) the study of Scots pine growth on sandy soil become urgent because of more frequent appearance of dry seasons. Purpose of the work is revelation of radial growth features of Scots pine with different origin in dry conditions of sandy soil and assessment of external factors influence. The main feature of radial growth of majority of studied pine provenances in conditions of sandy soil is presence of significant variation of increment with distinct decline in 25-years old with loss of tree rings in a number of cases. The reason of it is complex of factors: deficit of June precipitation and next following outbreak of fungal disease. Found «frost rings» for all trees of studied clymatypes in 1992 are the consequence of temperature decline from May 21 to June 2 - from 23 C degrees up to 2 C. Perspective climatypes with biggest radial increments and least sensitivity to fungal disease were revealed.

  4. Sports drug testing: Analytical aspects of selected cases of suspected, purported, and proven urine manipulation.

    PubMed

    Thevis, Mario; Geyer, Hans; Sigmund, Gerd; Schänzer, Wilhelm

    2012-01-01

    Manipulation of urine specimens provided by elite athletes for doping control purposes has been reported several times in the past, and in most of these cases urine substitution was eventually proven. Recent findings of suspected and substantiated manipulation have outlined the complexity and diversity of tampering options, sample appearance alterations resulting from non-manipulative influence, and the analytical challenges arising from these scenarios. Using state-of-the-art mass spectrometric and immunological doping control and forensic chemistry methodologies, four unusual findings were observed. One sports drug testing specimen was found to contain an unusually high content of saccharides accompanied by hordenine and Serpine-Z4, while no endogenous steroid (e.g. testosterone, epitestosterone, androsterone and etiocholanolone) was detected. This specimen was identified as non-alcoholic beer filled into the doping control sample container, constituting an undisputed doping offense. A doping control sample of bright green color was received and found to contain residues of methylene blue, which is not considered relevant for doping controls as no masking or manipulative effect is known. In addition, the number of urine samples of raspberry to crimson red coloration received at doping control laboratories has constantly increased during the last years, attributed to the presence of hemoglobin or betanin/isobetanin. Also here, no doping rule violation was given and an impact on routine analytical results was not observed. Finally, a total of 8 sports drug testing samples collected at different competition sites was shown to contain identical urine specimens as indicated by steroid profile analysis and conclusively proven by DNA-STR (short tandem repeat) analysis. Here, the athletes in question were not involved in the urine substitution act but the doping control officer was convicted of sample manipulation.

  5. Identifying provenance-specific features of detrital heavy mineral assemblages in sandstones

    NASA Astrophysics Data System (ADS)

    Morton, Andrew C.; Hallsworth, Claire

    1994-05-01

    The composition of heavy mineral assemblages in sandstones may be heavily influenced by processes operating during transport, deposition and diagenesis. As a consequence, conventional heavy mineral data may not be a reliable guide to the nature of sediment source material. Certain features of heavy mineral suites, however, are inherited directly from the source area without significant modification, such as the varietal characteristics of individual mineral species. This paper describes an alternative approach to varietal studies that concentrates on relative abundances of minerals that are stable during diagenesis and have similar hydraulic behaviour. Ratios of apatite to tourmaline, TiO 2 minerals to zircon, monazite to zircon, and chrome spinel to zircon provide a good reflection of the source rock characteristics, because they are comparatively immune to alteration during the sedimentary cycle. These ratios are described as index values (ATi, RZi, MZi and CZi, respectively). This approach avoids some of the practical problems associated with varietal studies, such as the need to make subjective decisions about mineral properties or to use advanced analytical techniques that may not be accessible to the analyst. It also makes use of more components of the heavy mineral suite and thus provides a more balanced view of provenance characteristics. The use of these ratios is illustrated with examples from Upper Jurassic sandstones in the Outer Moray Firth area of the UK continental shelf and Triassic sandstones from onshore and offshore UK. Heavy mineral indices, notably ATi and MZi, show marked variations in Upper Jurassic Piper sandstones of the Outer Moray Firth. Main Piper sandstones have lower ATi and MZi values compared with Supra Piper sandstones, indicating significant stratigraphic evolution of provenance. The UK Triassic shows major regional variations in a number of index values, including ATi, MZi and CZi, demonstrating that sediment was supplied from

  6. Provenance record of Paleogene exhumation and Laramide basin evolution along the southern Rocky Mountain front

    NASA Astrophysics Data System (ADS)

    Bush, M. A.; Horton, B. K.; Murphy, M. A.; Stockli, D. F.

    2015-12-01

    The Sangre de Cristo and Nacimiento uplifts of the southern Rocky Mountains formed key parts of a major Paleogene topographic boundary separating the Cordilleran orogenic system from the North American plate interior. This barrier largely isolated interior Laramide basins from a broad Laramide foreland with fluvial systems draining to the Gulf of Mexico, and thereby played a critical role in the evolution of continental-scale paleodrainage patterns. New detrital zircon U-Pb geochronology and heavy mineral provenance analyses of Cretaceous-Paleogene siliciclastic strata in the Raton, Galisteo-El Rito, and San Juan basins record the partitioning of the broad Cordilleran (Sevier) foreland basin by Laramide basement uplifts. These trends are recognized both in provenance signals and depositional styles corresponding to cratonward (eastward) propagation of the Laramide deformation front and resultant advance of flexural depocenters in the North American interior. Along the eastern flank of the deformation front, the Raton basin shows a mix of Cordilleran, Appalachian, and Grenville age zircons restricted to the Cretaceous Dakota and Vermejo formations, marine units of the Western Interior Seaway. Upsection, the Cordilleran age peaks are absent from Paleocene-Eocene units, consistent with significant Laramide drainage reorganization and isolation from Cordilleran sources to the west. In the Galisteo-El Rito basin system, a shift to dominantly Mazatzal-Yavapai basement ages is recognized in the Paleocene El Rito and Oligocene Ritito formations. The heavy mineral results show a corresponding shift to less mature, dominantly metamorphic source compositions. These new datasets bear upon Cretaceous-Cenozoic reconstructions of North American paleodrainage and have implications for potential linkages between major fluvial systems of the southern Rocky Mountains and Paleogene deepwater reservoir units in the Gulf of Mexico basin.

  7. An ecological genetic delineation of local seed-source provenance for ecological restoration

    PubMed Central

    Krauss, Siegfried L; Sinclair, Elizabeth A; Bussell, John D; Hobbs, Richard J

    2013-01-01

    An increasingly important practical application of the analysis of spatial genetic structure within plant species is to help define the extent of local provenance seed collection zones that minimize negative impacts in ecological restoration programs. Here, we derive seed sourcing guidelines from a novel range-wide assessment of spatial genetic structure of 24 populations of Banksia menziesii (Proteaceae), a widely distributed Western Australian tree of significance in local ecological restoration programs. An analysis of molecular variance (AMOVA) of 100 amplified fragment length polymorphism (AFLP) markers revealed significant genetic differentiation among populations (ΦPT = 0.18). Pairwise population genetic dissimilarity was correlated with geographic distance, but not environmental distance derived from 15 climate variables, suggesting overall neutrality of these markers with regard to these climate variables. Nevertheless, Bayesian outlier analysis identified four markers potentially under selection, although these were not correlated with the climate variables. We calculated a global R-statistic using analysis of similarities (ANOSIM) to test the statistical significance of population differentiation and to infer a threshold seed collection zone distance of ∼60 km (all markers) and 100 km (outlier markers) when genetic distance was regressed against geographic distance. Population pairs separated by >60 km were, on average, twice as likely to be significantly genetically differentiated than population pairs separated by <60 km, suggesting that habitat-matched sites within a 30-km radius around a restoration site genetically defines a local provenance seed collection zone for B. menziesii. Our approach is a novel probability-based practical solution for the delineation of a local seed collection zone to minimize negative genetic impacts in ecological restoration. PMID:23919158

  8. Detrital zircon provenance of the Paleogene syn-rift sediments in the northern South China Sea

    NASA Astrophysics Data System (ADS)

    Shao, Lei; Cao, Licheng; Pang, Xiong; Jiang, Tao; Qiao, Peijun; Zhao, Meng

    2016-02-01

    The early rift sedimentation history of the South China Sea is still not well understood due to restricted borehole coverage of the Paleogene strata and lack of reliable stratigraphic dating. We use detrital zircon U-Pb geochronology to explore the source-to-sink characteristics of syn-rift sequences in the northern South China Sea. The results reveal significant intrabasinal provenances in addition to the well-perceived terrigenous supply from the north. The Dongsha Uplift is considered to account for the dominance of the Early Cretaceous zircons in the Eocene samples. The Lower Oligocene sediments in the Qiongdongnan Basin could have been sourced from Hainan Island and local uplifts, but their distinction cannot be confirmed by the U-Pb age spectra. Contemporary sediments in the northern Pearl River Mouth Basin were most likely transported from southeastern South China with well-rounded zircon grains showing U-Pb age similarity to those from the northeastern tributaries of the Pearl River. By contrast, intrabasinal sources from the west and east are suggested to have contributed the infill of the southern part of the Pearl River Mouth Basin based on generally euhedral zircon shapes. These sedimentary source patterns appear to change very little in the Oligocene northern South China Sea. However, the newly detected Neoproterozoic zircons in the Upper Oligocene sediments from borehole L21 tend to indicate a southern source. The episodic and diachronic nature of rifting and erosion processes in the early South China Sea is the cause of complex patterns in the Paleogene provenance history.

  9. Investigating the provenance of thermal groundwater using compositional multivariate statistical analysis: a hydrogeochemical study from Ireland

    NASA Astrophysics Data System (ADS)

    Blake, Sarah; Henry, Tiernan; Murray, John; Flood, Rory; Muller, Mark R.; Jones, Alan G.; Rath, Volker

    2016-04-01

    The geothermal energy of thermal groundwater is currently being exploited for district-scale heating in many locations world-wide. The chemical compositions of these thermal waters reflect the provenance and hydrothermal circulation patterns of the groundwater, which are controlled by recharge, rock type and geological structure. Exploring the provenance of these waters using multivariate statistical analysis (MSA) techniques increases our understanding of the hydrothermal circulation systems, and provides a reliable tool for assessing these resources. Hydrochemical data from thermal springs situated in the Carboniferous Dublin Basin in east-central Ireland were explored using MSA, including hierarchical cluster analysis (HCA) and principal component analysis (PCA), to investigate the source aquifers of the thermal groundwaters. To take into account the compositional nature of the hydrochemical data, compositional data analysis (CoDa) techniques were used to process the data prior to the MSA. The results of the MSA were examined alongside detailed time-lapse temperature measurements from several of the springs, and indicate the influence of three important hydrogeological processes on the hydrochemistry of the thermal waters: 1) increased salinity due to evaporite dissolution and increased water-rock-interaction; 2) dissolution of carbonates; and 3) dissolution of metal sulfides and oxides associated with mineral deposits. The use of MSA within the CoDa framework identified subtle temporal variations in the hydrochemistry of the thermal springs, which could not be identified with more traditional graphing methods (e.g., Piper diagrams), or with a standard statistical approach. The MSA was successful in distinguishing different geological settings and different annual behaviours within the group of springs. This study demonstrates the usefulness of the application of MSA within the CoDa framework in order to better understand the underlying controlling processes

  10. Snow precipitation at four ice core sites in East Antarctica: provenance, seasonality and blocking factors

    NASA Astrophysics Data System (ADS)

    Scarchilli, Claudio; Frezzotti, Massimo; Ruti, Paolo Michele

    2011-11-01

    Snow precipitation is the primary mass input to the Antarctic ice sheet and is one of the most direct climatic indicators, with important implications for paleoclimatic reconstruction from ice cores. Provenance of precipitation and the dynamic conditions that force these precipitation events at four deep ice core sites (Dome C, Law Dome, Talos Dome, and Taylor Dome) in East Antarctica were analysed with air mass back trajectories calculated using the Lagrangian model and the mean composite data for precipitation, geopotential height and wind speed field data from the European Centre for Medium Range Weather Forecast from 1980 to 2001. On an annual basis, back trajectories showed that the Atlantic-Indian and Ross-Pacific Oceans were the main provenances of precipitation in Wilkes Land (80%) and Victoria Land (40%), respectively, whereas the greatest influence of the ice sheet was on the interior near the Vostok site (80%) and in the Southwest Ross Sea (50%), an effect that decreased towards the coast and along the Antarctic slope. Victoria Land received snowfall atypically with respect to other Antarctica areas in terms of pathway (eastern instead of western), seasonality (summer instead of winter) and velocity (old air age). Geopotential height patterns at 500 hPa at low (>10 days) and high (2-6 days) frequencies during snowfall cycles at two core sites showed large positive anomalies at low frequencies developing in the Tasman Sea-Eastern Indian Ocean at higher latitudes (60-70°S) than normal. This could be considered part of an atmospheric blocking event, with transient eddies acting to decelerate westerlies in a split region area and accelerate the flow on the flanks of the low-frequency positive anomalies.

  11. Testing Models of Modern Glacial Erosion of the St. Elias Mountains, Alaska Using Marine Sediment Provenance

    NASA Astrophysics Data System (ADS)

    Penkrot, M. L.; Jaeger, J. M.; Loss, D. P.; Bruand, E.

    2015-12-01

    The glaciated coastal St. Elias Range in Alaska is a primary site to examine climate-tectonic interactions. Work has primarily focused on the Bering-Bagley and Malaspina-Seward ice fields, utilizing detrital and bedrock zircon and apatite geochronology to examine local exhumation and glacial erosion (Berger et al., 2008; Enkelmann et al., 2009; Headly et al., 2013). These studies argue for specific regions of tectonically focused or climatically widespread glacial erosion. Analyzed zircon and apatite grains are sand size, however glacial erosion favors the production of finer-grained sediments. This study focuses on the geochemical provenance of the silt-size fraction (15-63μm) of surface sediments collected throughout the Gulf of Alaska (GOA) seaward of the Bering and Malaspina glaciers to test if the exhumation patterns observed in zircon and apatites are also applicable for the silt size fraction. Onshore bedrock Al-normalized elemental data were used to delineate sediment sources, and a subset of provenance-applicable elements was chosen. Detrital thermochronologic data suggest that sediment produced by the Bagley/Bering system is derived from bedrock on the windward side with input from the Chugach Metamorphic Complex (CMC) underlying the Bagley only during glacial surge events (Headly et al., 2013). Geochemical observations of GOA silt deposited during the 1994-95 surge event confirm input of CMC sediment (elevated in Cr, Ni, Sc, Sr, depleted in Hf, Pb and Rb relative to Kultieth and Poul Creek formations). We also observe a windward-side sediment source (Kultieth and Poul Creek). It is hypothesized that the sediment carried by the Malaspina is primarily from CMC rock underlying the Seward ice field mixed with Yakataga formation rock that underlies the Seward throat (Headly et al., 2013). Geochemical observations of GOA silt support this hypothesis.

  12. Local adaptations and climate change: converging sensitivity of bud break in black spruce provenances

    NASA Astrophysics Data System (ADS)

    Rossi, Sergio

    2015-07-01

    Species with transcontinental distribution or spread over wide geographical regions develop populations with growth traits genetically adapted to the local climate. The aim of this study was to investigate the ecotypic sensitivity of bud break, a strong adaptive trait, to a changing environment. Six phenological phases of bud break were monitored daily on black spruce [ Picea mariana (Mill.) BSP] seedlings submitted to different temperatures (12, 16 and 20 °C) and photoperiods (14, 18 and 22 h). Six provenances were tested in growth chambers, produced from seeds collected along the whole latitudinal range of the closed boreal forest in Quebec, Canada. Bud break lasted 13.3 days on average and occurred earlier in seedlings from colder sites. The annual temperature of the sites suitably tracked the clinal variation among ecotypes, providing a clear biological explanation for the environmental signal driving the adaptive divergence of populations to the local climate. Increasing temperature induced an earlier bud break according to a non-linear pattern with greater advancements observed between 12 and 16 °C. Photoperiod was significant, but sensitivity analysis indicated that its effect on bud break was marginal with respect to temperature. No interaction of provenance × treatment was observed, demonstrating an ecotypic convergence of the responses to both factors. Changes in the growing conditions could substantially modify the synchronization between bud phenology and climate, thus exposing the developing meristems of black spruce to frost damage. However, similar advancements of bud break could be expected in the different ecotypes subjected to warmer temperatures or longer day lengths.

  13. Provenance, tectonics and palaeoclimate of Proterozoic Chandarpur sandstones, Chattisgarh basin: A petrographic view

    NASA Astrophysics Data System (ADS)

    Datta, Basudeb

    2005-06-01

    Sandstones of early Neoproterozoic Chandarpur Group, Chattisgarh Supergroup, central India display progressive change towards greater textural and mineralogical maturity from base to top of the succession. The clay-silt matrix decreases, sorting of sand grains improves, frequency of rounded grains increases, monocrystalline quartz content increases with concomitant decrease in polycrystalline quartz, feldspar and rock fragments. The trend of variations in different mineralogical and textural attributes, however, exhibits inflections at different stratigraphic levels. The sandstones of the basal Lohardih Formation are alluvial fan deposits, characterized by high matrix and feldspar content, iron-oxide impregnated highly angular grains and poor sorting. Petrographic properties collectively indicate that the sandstones were derived from a weathered granitic crust under a humid climatic condition. Abundance of well rounded grains within the alluvial fan and overlying braided fluvial deposit indicates prolonged wind action during episodes of high aridity. The shallow marine deposit overlying the fluvial deposits in the upper part of the Lohardih Formation exhibits bed-to-bed variation in the frequency of angular grains, feldspar content and overall maturity suggesting environmentally controlled segregation of sediments. The abrupt appearance of coarse-grained immature sandstones with concomitant reappearance of iron-oxide impregnated/altered feldspar grains in the upper part of the shelf deposits of the Chaporadih Formation point to a phase of tectonic uplift that possibly triggered a regression. Continued regression and peneplanation heralded the deposition of supermature medium-grained purple quartzarenite of the upper shoreface Kansapathar Formation in the uppermost part of the Chandarpur succession under a hot desertic climatic condition. The provenance analysis revealed that the Chandarpur clastics were derived from granites and granite-gneisses of a continental

  14. Detrital record of mountain building: Provenance of Jurassic foreland basin to the Dabie Mountains

    NASA Astrophysics Data System (ADS)

    Yang, Jianghai; Cawood, Peter A.; Du, Yuansheng

    2010-08-01

    The Huangshi foreland basin developed on the southern margin of the Dabie Mountains as a result of tectonic loading during Triassic collisional suturing between the North China and South China cratons. Modal and detrital zircon data for Jurassic samples within the basin suggest a multicomponent source with input from both the South China Craton and Dabie Orogen. Samples are predominantly quartz arenites derived, on the basis of framework compositions, from a recycled orogen source. Detrital zircons range in age from Archean to Triassic with a dominant component in the late Paleoproterozoic between 1.9-1.7 Ga and subsidiary components at 2.6-2.2 Ga, 0.8-0.7 Ga, 0.5-0.4 Ga, and 0.33-0.2 Ga. Age data integrated with cathodoluminescence and trace element data for the zircons indicate that the Archean and Proterozoic detritus was derived from igneous and metamorphic sources that overlap with time-equivalent pulses of such activity within the South China Craton. Phanerozoic zircon ages overlap the times of the Ordovician, Carboniferous and Triassic high-pressure metamorphism in the Dabie Mountains. The provenance record, integrated with paleocurrent and regional relations, enables a paleogeographic reconstruction in which the Huangshi Basin was fed by a major axial flowing trunk river system carrying detritus from eastern and southern sources within the South China Craton and was also fed by short south flowing tributaries supplying some detritus from the evolving Dabie Orogen. The dominance of cratonic-derived detritus within the provenance record of the Huangshi Basin contrasts with that of the Hefei foreland basin that lies to the north of the Dabie Mountains, which is dominated by Neoproterozoic - Mesozoic detritus derived directly from the Dabie Mountains and lacks any significant older Paleoproterozoic or Archean components. Easterly extensions of the Dabie-Sulu collisional suture and of the resultant Huangshi Basin occur in Korea and Japan over an along strike

  15. Sports drug testing: Analytical aspects of selected cases of suspected, purported, and proven urine manipulation.

    PubMed

    Thevis, Mario; Geyer, Hans; Sigmund, Gerd; Schänzer, Wilhelm

    2012-01-01

    Manipulation of urine specimens provided by elite athletes for doping control purposes has been reported several times in the past, and in most of these cases urine substitution was eventually proven. Recent findings of suspected and substantiated manipulation have outlined the complexity and diversity of tampering options, sample appearance alterations resulting from non-manipulative influence, and the analytical challenges arising from these scenarios. Using state-of-the-art mass spectrometric and immunological doping control and forensic chemistry methodologies, four unusual findings were observed. One sports drug testing specimen was found to contain an unusually high content of saccharides accompanied by hordenine and Serpine-Z4, while no endogenous steroid (e.g. testosterone, epitestosterone, androsterone and etiocholanolone) was detected. This specimen was identified as non-alcoholic beer filled into the doping control sample container, constituting an undisputed doping offense. A doping control sample of bright green color was received and found to contain residues of methylene blue, which is not considered relevant for doping controls as no masking or manipulative effect is known. In addition, the number of urine samples of raspberry to crimson red coloration received at doping control laboratories has constantly increased during the last years, attributed to the presence of hemoglobin or betanin/isobetanin. Also here, no doping rule violation was given and an impact on routine analytical results was not observed. Finally, a total of 8 sports drug testing samples collected at different competition sites was shown to contain identical urine specimens as indicated by steroid profile analysis and conclusively proven by DNA-STR (short tandem repeat) analysis. Here, the athletes in question were not involved in the urine substitution act but the doping control officer was convicted of sample manipulation. PMID:21955645

  16. Are Local Filters Blind to Provenance? Ant Seed Predation Suppresses Exotic Plants More than Natives

    PubMed Central

    Pearson, Dean E.; Icasatti, Nadia S.; Hierro, Jose L.; Bird, Benjamin J.

    2014-01-01

    The question of whether species’ origins influence invasion outcomes has been a point of substantial debate in invasion ecology. Theoretically, colonization outcomes can be predicted based on how species’ traits interact with community filters, a process presumably blind to species’ origins. Yet, exotic plant introductions commonly result in monospecific plant densities not commonly seen in native assemblages, suggesting that exotic species may respond to community filters differently than natives. Here, we tested whether exotic and native species differed in their responses to a local community filter by examining how ant seed predation affected recruitment of eighteen native and exotic plant species in central Argentina. Ant seed predation proved to be an important local filter that strongly suppressed plant recruitment, but ants suppressed exotic recruitment far more than natives (89% of exotic species vs. 22% of natives). Seed size predicted ant impacts on recruitment independent of origins, with ant preference for smaller seeds resulting in smaller seeded plant species being heavily suppressed. The disproportionate effects of provenance arose because exotics had generally smaller seeds than natives. Exotics also exhibited greater emergence and earlier peak emergence than natives in the absence of ants. However, when ants had access to seeds, these potential advantages of exotics were negated due to the filtering bias against exotics. The differences in traits we observed between exotics and natives suggest that higher-order introduction filters or regional processes preselected for certain exotic traits that then interacted with the local seed predation filter. Our results suggest that the interactions between local filters and species traits can predict invasion outcomes, but understanding the role of provenance will require quantifying filtering processes at multiple hierarchical scales and evaluating interactions between filters. PMID:25099535

  17. Isotopic and magnetic provenance characterization of distal IRD in the Galicia Interior Basin (NW Iberia)

    NASA Astrophysics Data System (ADS)

    Plaza-Morlote, Maider; Rey, Daniel; Francisco Santos, Jose; Ribeiro, Sara; Bernabeu, Ana; Mohamed, Kais; Heslop, David; Rubio, Belén; Martins, Virginia

    2016-04-01

    The sediments of the Galicia Interior Basin in NW Iberia Margin are of particular palaeoclimatic interest as they are located at the boundary where the climatic oscillations of the glacial interval were interrupted by extreme events such as Heinrich events. These events are well characterized in Northern North Atlantic areas, but little is known about their occurrence beyond the Ruddiman belt. This study presents a combined environmagnetic and geochemical approach to the provenance and characterization of distal ice-rafted detritus (IRD) that occurred during the last glacial period in core CI12PC3 from the Galicia Interior Basin. The last six Heinrich Layers were identified by their magneto-mineralogical and geochemical properties. Their Sr and Nd isotopic signatures indicated that the Laurentide Ice Sheet was the major source for HL1, HL2, HL4 and HL5. However, the European ice sheets also influenced the initial development stages of HL1, HL2, HL4. HL3, HL6 and partially HL1, HL2 and HL4 were influenced by more juvenile provinces, such as Iceland/Faroes sheets and/or by the Fram Strait/East Greenland nearby areas. Separate provenance analyses of the coarse and fine fractions in the studied Heinrich Layers also indicated that IRDs and glacial flour sources might not always be the same. Our results shed unequivocal evidence that Canadian-sourced distal IRD are preceded by European-sourced IRD, at least from the H4. In our view, LIS and EIS instabilities registered in the Iberian Margin respond to the same climate forcing at different velocities.

  18. A recipe for the use of rutile in sedimentary provenance analysis

    NASA Astrophysics Data System (ADS)

    Triebold, Silke; von Eynatten, Hilmar; Zack, Thomas

    2012-12-01

    Rutile has received considerable attention in the last decade as a valuable petrogenetic indicator mineral. Based on both new and previously published data, we carve out advantages and pitfalls regarding TiO2-minerals in sedimentary provenance analysis. This results in a recipe for the use of rutile in provenance studies. The main points are: Rutile geochemistry from different grain size fractions does not differ systematically, and hence rutiles should be extracted from the fraction containing the most rutile grains (usually 63-200 μm). Similarly, different magnetic susceptibility of rutile does not systematically imply different trace element composition. Before interpretation of TiO2-mineral data, it is important to determine the polymorph type. Rutile, anatase and brookite appear to differ systematically in trace element composition. As an alternative to Raman spectroscopy, chemical classification according to Nb, Cr, Sn, Fe, V, and Zr concentrations can be applied. For rutile, a new host lithology discrimination scheme based on Cr-Nb systematics is introduced (x = 5 ∗ (Nb [ppm] - 500) - Cr [ppm]), which leads to better classification results than previously published discrimination methods. According to this equation, metamafic rutiles have negative values of x, while metapelitic rutiles have positive values. Evaluation of the growth temperature calculations of metamorphic rutile after different authors shows that the equations given by Tomkins et al. (2007) should be applied to both metamafic and metapelitic rutiles. Although there is a pressure effect on the Zr incorporation in rutile, the pressure range for most rutiles of 5-15 kbar introduces an uncertainty in calculated temperature of no more than ± 35 °C. The distribution of calculated temperatures from detrital rutiles is crucial; only well-defined temperature populations should be used for thermometry interpretation.

  19. Petrology and provenance of Upper Cretaceous Sandstone, southern San Rafael Mountains, Santa Barbara County, California

    SciTech Connect

    Toyne, C.D.

    1987-05-01

    Petrologic analysis of 24 medium to coarse-grained sandstone samples, collected from a 2950-m submarine fan complex of late Campanian-early Maestrichtian age exposed within Mono Creek Canyon, reveal commonly calcite cemented, poorly sorted, subangular biotic arkoses. Framework averages 86.0%. Matrix - primarily detrital quartz, feldspar, and lithic fragments finer than 0.03 mm and mechanically and chemically altered phyllosilicates and labile aphanites - averages 8.9%. Calcite cement averages 4.2%. Porosity averages 0.9%. Gazzi-Dickinson point counts of 400 framework grains per slide yield modal averages of Q/sub 37.7/ F/sub 49.8/ L/sub 12.5/; Qm/sub 27.4/ F/sub 49.8/ Lt/sub 22.8/; Qm/sub 35.6/ P/sub 43.7/ K/sub 20.7/; and Qp/sub 49.4/ Lv/sub 22.1/ Ls/sub 28.5/. P/F averages 0.68, Lv/L averages 0.45, Qp/Q averages 0.27, and detrital phyllosilicate, predominantly biotite, averages 5.7% of total framework. Neither primary nor secondary parameters vary systematically with stratigraphic position. Miscellaneous constituents average 1.3% of framework and include epidote, garnet, amphibole, pyroxene, zircon, and tourmaline as well as carbonaceous blebs, opaque minerals, and unidentifiable lithic fragments. Separate analysis of 100 medium sized quartz grains per slide indicates a mean population of 63.0% non-undulatory monocrystalline quartz, 9.1% undulatory monocrystalline quartz, 10.1% polycrystalline quartz of 2 to 3 crystals, and 17.9% polycrystalline quartz composed of more than 3 crystals. Modal data, plotted upon provenance discrimination diagrams, indicate a plutonic provenance transitional between a dissected magmatic arc and uplifted basement terrane. Paleocurrent data, neglecting possible clockwise rotation, indicate sediment transport from the north.

  20. Provenance analysis of the Oligocene turbidites (Andaman Flysch), South Andaman Island: A geochemical approach

    NASA Astrophysics Data System (ADS)

    Bandopadhyay, P. C.; Ghosh, Biswajit

    2015-07-01

    The Oligocene-aged sandstone-shale turbidites of the Andaman Flysch are best exposed along the east coast of the South Andaman Island. Previously undocumented sandstone-shale geochemistry, investigated here, provides important geochemical constraints on turbidite provenance. The average 70.75 wt% SiO2, 14.52 wt% Al2O3, 8.2 wt% FeMgO and average 0.20 Al2O3/SiO2 and 1.08 K2O/Na2O ratios in sandstones, compare with quartzwackes. The shale samples have average 59.63 wt% SiO2, 20.29 wt% Al2O3, 12.63 wt% FeMgO and average 2.42 K2O/Na2O and 0.34 Al2O3/SiO2 ratios. Geochemical data on CaO-Na2O-K2O diagram fall close to a granite field and on K2O/Na2O-SiO2 diagram within an active continental margin tectonic setting. The range and average values of Rb and Rb/Sr ratios are consistent with acid-intermediate igneous source rocks, while the values and ratios for Cr and Ni are with mafic rocks. Combined geochemical, petrographic and palaeocurrent data indicate a dominantly plutonic-metamorphic provenance with a lesser contribution from sedimentary and volcanic source, which is possibly the Shan-Thai continental block and volcanic arc of the north-eastern and eastern Myanmar. Chemical index of alteration (CIA) values suggests a moderate range of weathering of a moderate relief terrane under warm and humid climate.

  1. Exploring the temporal change in provenance encoded in the late Quaternary deposits of the Ganga Plain

    NASA Astrophysics Data System (ADS)

    Agrawal, Shailesh; Sanyal, Prasanta; Balakrishnan, Srinivasan; Dash, Jitendra K.

    2013-07-01

    Temporal analysis of Sr isotopes in soil carbonates and Sr and Nd isotopes in silicate fractions has been carried out in a sedimentary core (Kalpi core; 50 m long) raised from the southern bank of the Yamuna river, Ganga Plain, India. The aim of the study is to constrain sediment provenance through comparison with the modern Himalayan and peninsular river systems' water and bank sediments. Sr isotopic data in soil carbonates (0.71874 to 0.71410) and Srsbnd Nd isotopic data in silicate (0.72865 to 0.74544 and - 13.9 to - 17.2, respectively) vary significantly with depth and are indicative of both Himalayan and peninsular sources for sediments in the southern Ganga Plain. The positive correlation between 87Sr/86Sr ratio and 1/Sr in soil carbonate and the negative correlation between 87Sr/86Sr and ɛNd in silicate confirm mixing of sediments from these sources. Variations of 87Sr/86Sr ratios in soil carbonates show that at ~ 80 and 45 ka the Himalaya acted as the major source of sediments in the southern part of the Ganga Plain. The gradual decrease in 87Sr/86Sr ratios after 80 and 45 ka indicates change in source to peninsular India which is also supported by limited Sr and Nd isotope data in silicates. The change in sediment provenance corresponds well with the available climatic record and is suggestive of strong climatic control in sediment supply with high supply from the Himalaya during the interglacial period and peninsular sediments during glacial period.

  2. Survival and growth patterns of white spruce (Picea glauca [Moench] Voss) rangewide provenances and their implications for climate change adaptation.

    PubMed

    Lu, Pengxin; Parker, William H; Cherry, Marilyn; Colombo, Steve; Parker, William C; Man, Rongzhou; Roubal, Ngaire

    2014-06-01

    Intraspecific assisted migration (ISAM) through seed transfer during artificial forest regeneration has been suggested as an adaptation strategy to enhance forest resilience and productivity under future climate. In this study, we assessed the risks and benefits of ISAM in white spruce based on long-term and multilocation, rangewide provenance test data. Our results indicate that the adaptive capacity and growth potential of white spruce varied considerably among 245 range-wide provenances sampled across North America; however, the results revealed that local populations could be outperformed by nonlocal ones. Provenances originating from south-central Ontario and southwestern Québec, Canada, close to the southern edge of the species' natural distribution, demonstrated superior growth in more northerly environments compared with local populations and performed much better than populations from western Canada and Alaska, United States. During the 19-28 years between planting and measurement, the southern provenances have not been more susceptible to freezing damage compared with local populations, indicating they have the potential to be used now for the reforestation of more northerly planting sites; based on changing temperature, these seed sources potentially could maintain or increase white spruce productivity at or above historical levels at northern sites. A universal response function (URF), which uses climatic variables to predict provenance performance across field trials, indicated a relatively weak relationship between provenance performance and the climate at provenance origin. Consequently, the URF from this study did not provide information useful to ISAM. The ecological and economic importance of conserving white spruce genetic resources in south-central Ontario and southwestern Québec for use in ISAM is discussed.

  3. Kosi megafan: Sub-surface stratigraphy, sediment provenance and paleoclimate proxies

    NASA Astrophysics Data System (ADS)

    Sinha, Rajiv; Yadav, Manish; Paul, Debajyoti; Chabaux, François; Granet, Mathieu

    2015-04-01

    sediment leaching/sorting, these are used for provenance determination. Isotopic composition (87Sr/86Sr: 0.7785 to 0.8592; ɛNd: -21.2 to -17.8) of Kosi core sediments are the most radiogenic reported so far in the Gangetic basin, and also suggest binary mixing of sediments contributed from both Higher Himalayan (HH) and Lesser Himalayan (LH) sources. Down core isotopic variability shows variation in sediment provenance due to major climatic shifts - high 87Sr/86Sr and low ɛNdcharacterize the interglacial period whereas low 87Sr/86Sr and high ɛNddominate the glacial period. This is attributed to the litho-tectonic setting of the Kosi basin wherein deformed sequence of Himalayan zone exposes the HH rocks at a lower topographic level. In summary, stratigraphic reconstruction of one of the largest megafans in the world is unraveled and the controls of provenance and climate change during the Late Quaternary period are inferred from geochemical composition of the sediment cores.

  4. Provenance and Dispersal of Quaternary Sediments in the Gaxun Nur Basin, Inner Mongolia, China

    NASA Astrophysics Data System (ADS)

    Schimpf, S.; Diekmann, B.; Hartmann, K.; Wuennemann, B.; Zhang, C.

    2013-12-01

    The Gaxun Nur Basin is an intramontane accumulation area with one of the biggest continental alluvial fans in the world. It is situated in the western part of Inner Mongolia and its origin is the result of the interplay between tectonic activity and climate dynamics. Due to the endorheic character of the basin, it is predestined as a terrestrial longtime-archive of climate and environmental change. The sediments in the Gaxun Nur basin were deposited during the last 250 kyr by the Hei River System with a catchment size of roughly 130.000 km2. To understand the sedimentary processes of this huge sediment cascade from the Qilian Mountains in the south to the terminal lakes in the north, sources of sediments have to be investigated. Sediment provenance can be deduced from mineralogical fingerprints of modern sediments deposited along the recent pathways from the sources (Qilian Mountains) to the sink (Gaxun Nur Basin). The resulting spatial variation serves as a reference for the mineralogical data from a drilling core in the distal part of the Gaxun Nur Basin. Inferring spatial and temporal variation of sediment provenance provides important information for reconstructing sediment input by fluvial, eolian, lacustrine, and glacial processes. The methodical approach focusses on the analysis of clay and heavy minerals, using XRD and petrographic techniques. Other methods involve geochemistry of heavy mineral grains, using computer-controlled scanning electron microscope (CCSEM), as well as bulk geochemistry, XRF element scanning and a statistical data processing. In this poster we present geochemical and mineralogical data of a 20 m long sediment core (GN100) combined with the results of about 200 surface sediment samples from different archives of the whole Hei River catchment. Lithological changes in the drilling core reveal temporal variations in the depositional environment. These variations are related to alternating phases of fluvial and eolian activity supported

  5. Sr - an element shows the way - Applications of Sr isotopes for provenance, tracing and migration (Invited)

    NASA Astrophysics Data System (ADS)

    Prohaska, T.; Irrgeher, J.; Zitek, A.; Teschler Nicola, M.

    2010-12-01

    Strontium - named after the small Scottish town Strontian - as such is an element with little popularity. Firstly described by Martin Heinrich Klaproth in 1798, the metal is used in metallurgy to some extent whereas its compounds are interesting in glass industries, electronics and pyrotechnics. The element has chemical similarity to Ca and makes up 1/60 of the earth’s amount of the latter. Nonetheless, it is its isotopic composition which makes Sr so interesting for a large number of scientists. The natural composition of the four naturally occurring isotopes (84Sr, 86Sr 87Sr and 88Sr) varies in nature due to the radioactive decay of 87Rb to 87Sr. Thus, it was early recognized as geochronometer especially in Ca rich matrices. With increasing precision of applied methodology, the natural variation of the 87Sr/86Sr isotope ratio (analyzed at first mainly by thermal ionization mass spectrometry (TIMS)) became more and more popular in provenance studies. The natural variation of the ratio is mainly determined by the geological age and the original composition of the rock and can be used therefore as fingerprint of the local geology. The ratio is transferred with no significant fractionation via the water into plants and finally via the food chain into animal and human tissues (especially bones and teeth). As the element is chemically similar to Ca, it appears in most matrices. The use for provenance studies is supported by the fact that the long half life (4.8 x 1010 years) does not lead to an alteration during the time scales which are investigated (from recent samples to human or animal skeletal remains which date back up to 30.000 BC). The uniqueness of the system besides the natural variation is defined by the ubiquity in nature and the relatively high (and thus measurable) elemental concentration in most tissues. It was finally the advent of multiple collector inductively coupled plasma mass spectrometry (MC-ICP-MS) which augmented the number of applications

  6. Nd and Sr isotope compositions in modern and fossil bones - Proxies for vertebrate provenance and taphonomy

    NASA Astrophysics Data System (ADS)

    Tütken, Thomas; Vennemann, Torsten W.; Pfretzschner, Hans-U.

    2011-10-01

    Rare earth elements (REE), while not essential for the physiologic functions of animals, are ingested and incorporated in ppb concentrations in bones and teeth. Nd isotope compositions of modern bones of animals from isotopically distinct habitats demonstrate that the 143Nd/ 144Nd of the apatite can be used as a fingerprint for bedrock geology or ambient water mass. This potentially allows the provenance and migration of extant vertebrates to be traced, similar to the use of Sr isotopes. Although REE may be enriched by up to 5 orders of magnitude during diagenesis and recrystallization of bone apatite, in vivo143Nd/ 144Nd may be preserved in the inner cortex of fossil bones or enamel. However, tracking the provenance of ancient or extinct vertebrates is possible only for well-preserved archeological and paleontological skeletal remains with in vivo-like Nd contents at the ppb-level. Intra-bone and -tooth REE analysis can be used to screen for appropriate areas. Large intra-bone Nd concentration gradients of 10 1-10 3 are often measured. Nd concentrations in the inner bone cortex increase over timescales of millions of years, while bone rims may be enriched over millenial timescales. Nevertheless, ɛ Nd values are often similar within one ɛ Nd unit within a single bone. Larger intra-bone differences in specimens may either reflect a partial preservation of in vivo values or changing ɛ Nd values of the diagenetic fluid during fossilization. However, most fossil specimens and the outer rims of bones will record taphonomic 143Nd/ 144Nd incorporated post mortem during diagenesis. Unlike REE patterns, 143Nd/ 144Nd are not biased by fractionation processes during REE-uptake into the apatite crystal lattice, hence the ɛ Nd value is an important tracer for taphonomy and reworking. Bones and teeth from autochthonous fossil assemblages have small variations of ±1 ɛ Nd unit only. In contrast, fossil bones and teeth from over 20 different marine and terrestrial fossil

  7. Tracking eolian dust with helium and thorium: Impacts of grain size and provenance

    NASA Astrophysics Data System (ADS)

    McGee, David; Winckler, Gisela; Borunda, Alejandra; Serno, Sascha; Anderson, Robert F.; Recasens, Cristina; Bory, Aloys; Gaiero, Diego; Jaccard, Samuel L.; Kaplan, Michael; McManus, Jerry F.; Revel, Marie; Sun, Youbin

    2016-02-01

    terrigenous He in studies of extraterrestrial He in sediments and ice. We also investigate the use of He/Th ratios as a provenance tracer. Our results suggest differences in fine fraction He/Th ratios between East Asia, Australia, central South America and Patagonia, with ratios showing a positive relationship with the geological age of source rocks. He/Th ratios may thus provide useful provenance information, for example allowing separation of Patagonian sources from Puna-Central West Argentina or Australian dust sources. He/Th ratios in open-ocean marine sediments are similar to ratios in the fine fraction of upwind dust source areas. He/Th ratios in mid-latitude South Atlantic sediments suggest that dust in this region primarily derives from the Puna-Central West Argentina region (23-32°S) rather than Patagonia (>38°S). In the equatorial Pacific, He/Th ratios are much lower than in extratropical Pacific sediments or potential source areas measured as a part of this study (East Asia, South America, Australia) for reasons that are at present unclear, complicating their use as provenance tracers in this region.

  8. µ-XRF Analysis of Trace Elements in Lapis Lazuli-Forming Minerals for a Provenance Study.

    PubMed

    Angelici, Debora; Borghi, Alessandro; Chiarelli, Fabrizia; Cossio, Roberto; Gariani, Gianluca; Lo Giudice, Alessandro; Re, Alessandro; Pratesi, Giovanni; Vaggelli, Gloria

    2015-04-01

    This paper presents new developments on the provenance study of lapis lazuli started by our group in 2008: during the years a multi-technique approach has been exploited to obtain minero-petrographic characterization and creation of a database considering only rock samples of known provenance. Since the final aim of the study is to develop a method to analyze archeological findings and artworks made with lapis lazuli in a completely non-invasive way, ion beam analysis techniques were employed to trace the provenance of the raw material used for the production of artifacts. Continuing this goal and focusing the analysis on determination of more significant minero-chemical markers for the provenance study of trace elements in different minerals, the method was extended with the use of micro X-ray fluorescence (µ-XRF), to test the potential of the technique for this application. The analyzes were focused on diopside and pyrite in lapis lazuli samples of known provenance (Afghanistan, Tajikistan, and Siberia). In addition, µ-XRF data were compared with micro proton-induced X-ray emission (µ-PIXE) results to verify the agreement between the two databases and to compare the analytical performance of both techniques for this application. PMID:25782348

  9. Impact of experimentally elevated ozone on seed germination and growth of Russian pine (Pinus sylvestris) and spruce (Picea spp.) provenances.

    PubMed

    Prozherina, Nadezda; Nakvasina, Elena; Oksanen, Elina

    2009-12-01

    The impact of elevated ozone concentrations on early ontogenetic stages of pine (Pinus sylvestris) and spruce (Picea abies, Picea obovata, P. abies x P. obovata) seedlings originating from different provenances in Russia were studied in the open-field ozone fumigation system located in Kuopio, Finland, over a span of 2 y. The AOT40 value (accumulated ozone dose over the threshold 40 ppb during daylight hours) was 11 ppm hr per growing season, which was 1.4 times higher than the ambient air concentration. The plants were measured for germination rate; shoot increment; needle length; and dry mass of needles, shoots, and roots. Significant differences between pine and spruce provenance response to ozone were found in all parameters. Ozone stress immediately reduced the germination rate of Northern pine provenances, whereas biomass reductions became evident during the second year of the exposure in all pine provenances. Spruce species were more tolerant to elevated ozone concentrations. Our results indicate that seedling development is vulnerable to increasing ozone concentrations and that attention must be paid to the provenance selection.

  10. µ-XRF Analysis of Trace Elements in Lapis Lazuli-Forming Minerals for a Provenance Study.

    PubMed

    Angelici, Debora; Borghi, Alessandro; Chiarelli, Fabrizia; Cossio, Roberto; Gariani, Gianluca; Lo Giudice, Alessandro; Re, Alessandro; Pratesi, Giovanni; Vaggelli, Gloria

    2015-04-01

    This paper presents new developments on the provenance study of lapis lazuli started by our group in 2008: during the years a multi-technique approach has been exploited to obtain minero-petrographic characterization and creation of a database considering only rock samples of known provenance. Since the final aim of the study is to develop a method to analyze archeological findings and artworks made with lapis lazuli in a completely non-invasive way, ion beam analysis techniques were employed to trace the provenance of the raw material used for the production of artifacts. Continuing this goal and focusing the analysis on determination of more significant minero-chemical markers for the provenance study of trace elements in different minerals, the method was extended with the use of micro X-ray fluorescence (µ-XRF), to test the potential of the technique for this application. The analyzes were focused on diopside and pyrite in lapis lazuli samples of known provenance (Afghanistan, Tajikistan, and Siberia). In addition, µ-XRF data were compared with micro proton-induced X-ray emission (µ-PIXE) results to verify the agreement between the two databases and to compare the analytical performance of both techniques for this application.

  11. 50years of oral lipid-based formulations: Provenance, progress and future perspectives.

    PubMed

    Feeney, Orlagh M; Crum, Matthew F; McEvoy, Claire L; Trevaskis, Natalie L; Williams, Hywel D; Pouton, Colin W; Charman, William N; Bergström, Christel A S; Porter, Christopher J H

    2016-06-01

    Lipid based formulations (LBF) provide well proven opportunities to enhance the oral absorption of drugs and drug candidates that sit close to, or beyond, the boundaries of Lipinski's 'rule-of-five' chemical space. Advantages in permeability, efflux and presystemic metabolism are evident; however, the primary benefit is in increases in dissolution and apparent intestinal solubility for lipophilic, poorly water soluble drugs. This review firstly details the inherent advantages of LBF, their general properties and classification, and provides a brief retrospective assessment of the development of LBF over the past fifty years. More detailed analysis of the ability of LBF to promote intestinal solubilisation, supersaturation and absorption is then provided alongside review of the methods employed to assess formulation performance. Critical review of the ability of simple dispersion and more complex in vitro digestion methods to predict formulation performance subsequently reveals marked differences in the correlative ability of in vitro tests, depending on the properties of the drug involved. Notably, for highly permeable low melting drugs e.g. fenofibrate, LBF appear to provide significant benefit in all cases, and sustained ongoing solubilisation may not be required. In other cases, and particularly for higher melting point drugs such as danazol, where re-dissolution of crystalline precipitate drug is likely to be slow, correlations with ongoing solubilisation and supersaturation are more evident. In spite of their potential benefits, one limitation to broader use of LBF is low drug solubility in the excipients employed to generate formulations. Techniques to increase drug lipophilicity and lipid solubility are therefore explored, and in particular those methods that provide for temporary enhancement including lipophilic ionic liquid and prodrug technologies. The transient nature of these lipophilicity increases enhances lipid solubility and LBF viability, but

  12. Single grain detrital rutile U-Pb chronology: a key provenance tracer

    NASA Astrophysics Data System (ADS)

    Bracciali, Laura; Parrish, Randall R.; Najman, Yani; Horstwood, Matthew S. A.; Condon, Daniel J.

    2013-04-01

    Rutile is an accessory mineral commonly found in the heavy mineral suite of detrital rocks due to its stability during the sedimentary processes. This mineral originates mainly in medium- to high-grade metamorphic and some igneous rocks and similarly to zircon and other U-bearing minerals can be dated by the U-Pb method. Nevertheless, there are still very few applications of U-Pb dating of rutile to provenance studies, likely because it usually has a lower U content compared to zircon (which in turn leads to lower radiogenic Pb content limiting measurement quality) and it can contain a relatively large proportion of common (non radiogenic) Pb. In addition, there is a scarcity of widely available good quality natural rutile reference materials that can be used to assess reproducibility and accuracy of the dating technique. We have addressed these issues and characterized two ~ 1.8 Ga rutile reference materials (namely Sugluk-4 and PCA-S207 from granulite facies belts of the Canadian Shield) by SEM, trace elements, U-Pb ID-TIMS, and intra-grain and inter-grain U-Pb LA-MC-ICP-MS analysis. LA-U-Pb data (n ~ 500 for each of the two reference materials, collected using a New Wave Research 193 nm wavelength laser ablation system coupled to a Nu Plasma HR mass spectrometer) have a reproducibility of 206Pb/238U and 207Pb/206Pb of ~2-4% (at the 2? level), which is only modestly worse than long-term data for multiple zircon standards, this being due to the real variation in measured values arising from limited Pb loss, age variation related to cooling, and common Pb variability. The analytical measurement of rutile U-Pb data is rapid, allows high spatial resolution (the laser sampling protocol employs a 50 or 35 μm static spot) and does not include common Pb correction [1]. We have applied our refined method to constrain provenance of rutile from modern drainages from British Columbia and the eastern Himalaya (with rutile ages as young as 75% of all rutile grains in a

  13. Data Publication: Addressing the Issues of Provenance, Attribution, Citation, and Accessibility

    NASA Astrophysics Data System (ADS)

    Raymond, L. M.; Chandler, C. L.; Lowry, R. K.; Urban, E. R.; Moncoiffe, G.; Pissierssens, P.; Norton, C.

    2010-12-01

    Motivated by publisher and funding agency mandates, and a desire to properly attribute data sets to originating investigators, the Marine Biological Laboratory/Woods Hole Oceanographic Institution (MBLWHOI) Library and a team of data managers and scientists are collaborating with representatives from the Scientific Committee on Oceanic Research (SCOR) and the International Oceanographic Data and Information Exchange (IODE) of the Intergovernmental Oceanographic Commission. The work is inspired by a June 2008 SCOR/IODE Workshop on Data Publishing. The goal is to identify best practices for tracking data provenance and clearly attributing credit to data collectors/providers for data published in journal articles. To improve efficacy of data directly associated with a scientific article those data must be discoverable, citeable and freely available on the Internet. Resources, standards, and workflows must be defined to support publisher and funding agency mandates. For the data to be discoverable, appropriate metadata, defined using community accepted metadata standards, must be associated with the data source. Data will be made citeable by the assignment of a persistent identifier as well as provenance and attribution metadata. The availability of the data will be assured by submission to a data repository that has stability and permanence. In April 2010, project participants were challenged to develop and execute pilot projects related to two use cases in which: (1) data held by data centers are packaged and served in formats that can be cited and (2) data related to traditional journal articles are assigned persistent identifiers referred to in the articles and stored in institutional repositories, such as DSpace. The MBLWHOI Library team chose to focus on data that support published articles, particularly the data used to create the figures and tables. Several published papers were identified and used to test the MBLWHOI Library model based on open archive

  14. Nuclear Thermal Rocket (Ntr) Propulsion: A Proven Game-Changing Technology for Future Human Exploration Missions

    NASA Technical Reports Server (NTRS)

    Borowski, Stanley K.; McCurdy, David R.; Packard, Thomas W.

    2012-01-01

    The NTR represents the next evolutionary step in high performance rocket propulsion. It generates high thrust and has a specific impulse (Isp) of approx.900 seconds (s) or more V twice that of today s best chemical rockets. The technology is also proven. During the previous Rover and NERVA (Nuclear Engine for Rocket Vehicle Applications) nuclear rocket programs, 20 rocket reactors were designed, built and ground tested. These tests demonstrated: (1) a wide range of thrust; (2) high temperature carbide-based nuclear fuel; (3) sustained engine operation; (4) accumulated lifetime; and (5) restart capability V all the requirements needed for a human mission to Mars. Ceramic metal cermet fuel was also pursued, as a backup option. The NTR also has significant growth and evolution potential. Configured as a bimodal system, it can generate electrical power for the spacecraft. Adding an oxygen afterburner nozzle introduces a variable thrust and Isp capability and allows bipropellant operation. In NASA s recent Mars Design Reference Architecture (DRA) 5.0 study, the NTR was selected as the preferred propulsion option because of its proven technology, higher performance, lower launch mass, simple assembly and mission operations. In contrast to other advanced propulsion options, NTP requires no large technology scale-ups. In fact, the smallest engine tested during the Rover program V the 25,000 lbf (25 klbf) Pewee engine is sufficient for human Mars missions when used in a clustered engine arrangement. The Copernicus crewed spacecraft design developed in DRA 5.0 has significant capability and a human exploration strategy is outlined here that uses Copernicus and its key components for precursor near Earth asteroid (NEA) and Mars orbital missions prior to a Mars landing mission. Initially, the basic Copernicus vehicle can enable reusable 1-year round trip human missions to candidate NEAs like 1991 JW and Apophis in the late 2020 s to check out vehicle systems. Afterwards, the

  15. Data Provenance as a Tool for Debugging Hydrological Models based on Python

    NASA Astrophysics Data System (ADS)

    Wombacher, A.; Huq, M.; Wada, Y.; Van Beek, R.

    2012-12-01

    There is an increase in data volume used in hydrological modeling. The increasing data volume requires additional efforts in debugging models since a single output value is influenced by a multitude of input values. Thus, it is difficult to keep an overview among the data dependencies. Further, knowing these dependencies, it is a tedious job to infer all the relevant data values. The aforementioned data dependencies are also known as data provenance, i.e. the determination of how a particular value has been created and processed. The proposed tool infers the data provenance automatically from a python script and visualizes the dependencies as a graph without executing the script. To debug the model the user specifies the value of interest in space and time. The tool infers all related data values and displays them in the graph. The tool has been evaluated by hydrologists developing a model for estimating the global water demand [1]. The model uses multiple different data sources. The script we analysed has 120 lines of codes and used more than 3000 individual files, each of them representing a raster map of 360*720 cells. After importing the data of the files into a SQLite database, the data consumes around 40 GB of memory. Using the proposed tool a modeler is able to select individual values and infer which values have been used to calculate the value. Especially in cases of outliers or missing values it is a beneficial tool to provide the modeler with efficient information to investigate the unexpected behavior of the model. The proposed tool can be applied to many python scripts and has been tested with other scripts in different contexts. In case a python code contains an unknown function or class the tool requests additional information about the used function or class to enable the inference. This information has to be entered only once and can be shared with colleagues or in the community. Reference [1] Y. Wada, L. P. H. van Beek, D. Viviroli, H. H. Drr, R

  16. The geochemical signature of Neogene Eastern Mediterranean sediment: evidence for temporal and spatial variations in provenance

    NASA Astrophysics Data System (ADS)

    Klaver, Martijn; Vroon, Pieter; Wijbrans, Jan

    2014-05-01

    Subducted sediment is one of the main geochemical components in arc magmas. Although an east-west gradient in Eastern Mediterranean Sea (EMS) sediment composition has been evoked to explain the along-arc geochemical variations in Aegean arc magmas [1], solid evidence for E-W changes in EMS sediment composition is lacking. The EMS sediment dataset is limited to Holocene samples, while the sediment currently underneath the volcanic arc has an age of at least 6 Ma. In order to characterise EMS sediment, we have used a combination of thermogravimetric and geochemical analyses of 45 Neogene DSDP and ODP drill core samples. Thermogravimetric dissociation curves provide a rapid way to determine carbonate-content and relative abundance of clay mineral groups in mixed sediment samples. Clear clay mineral distribution patterns are observed in the EMS: smectite is dominant in Nile sediment, aeolian dust consist mainly of kaolinite while illite is present in coarser (shelf) sediment. Four distinct provenance areas can be recognised on the basis of radiogenic isotope and trace element ratios of the EMS sediment samples. In line with previous studies [e.g. 2], we conclude that Sahara dust and Nile sediment are main constituents of EMS sediment. However, we recognize two additional source areas. Sediment derived from Cyprus and/or SW Turkey, characterised by high Ni/Nb ratios, is an important component in Quaternary EMS sediment. Sediment from the Aegean region has an arc signature (e.g. high La/Nb) and is distinguishable only in the Hellenic Trench. During the Neogene, an increase in aeolian dust input to the EMS is observed, which is consistent with the progressive aridification of the Sahara region. The geochemical characterisation of Neogene EMS sediment and the recognition of distinct provenance areas can be used to assess the contribution of subducted sediment to magmas in the Aeolian and Aegean volcanic arcs. In addition, it allows further high-resolution investigation of

  17. Poor mobilizer: a retrospective study on proven and predicted incidence according to GITMO criteria.

    PubMed

    Piccirillo, Nicola; Vacca, Michele; Lanti, Alessandro; Ipsevich, Francesco; Maresca, Maddalena; Fiorelli, Elena; Bianchi, Maria; Adorno, Gaspare; Pierelli, Luca; Majolino, Ignazio; Leone, Giuseppe; Zini, Gina

    2012-10-01

    The Italian Group for Bone Marrow Transplantation (Gruppo Italiano Trapianto di Midollo Osseo, GITMO) recently formalized criteria for a shared definition of poor mobilizer in order to facilitate randomized clinical trials and study comparison focusing on the efficacy of current mobilizing regimens. The availability of a standardized tool for poor mobilizer definition suggested us to retrospectively test GITMO criteria feasibility and applicability. Therefore we analyzed medical and laboratory records of adult patients affected by myeloma (MM) or lymphoma undergoing mobilization for autologous peripheral blood HSC collection from January 2010 to June 2011, at Servizio di Emotrasfusione, Istituto di Ematologia, Università Cattolica Del Sacro Cuore, Roma, UOC SIMT AO S. Camillo Forlanini Roma and SIMT Fondazione Policlinico Tor Vergata Roma. We collected data about 227 patients (134 male, 93 female) affected by MM (31.3%) NHL (58.6%) e HD (10.1%). Thirty-nine patients, 21 male and 18 female met proven poor mobilizer criteria definition resulting in a incidence of 17.2% (12.7% in MM, 21.8% in NHL and 4.3% in HD). Eleven patients, seven affected by lymphoma and four affected by myeloma, were defined predicted PM according to major criteria. Eight patients, seven affected by lymphoma and one affected by myeloma, were define predicted PM according to minor criteria. Sixteen out of 39 patients defined as poor mobilizer either according to major or minor criteria underwent collection procedures and eight (20.5%) achieved a cell dose ⩾2×10(6)/kg CD34(+) cells. GITMO criteria application was easy and resulted in poor mobilizer incidence comparable to current literature. Definitions of proven poor mobilizer and predicted poor mobilizer according to major criteria were very effective while minor criteria were less predictive. These results came from a retrospective analysis and therefore should be validated in future prospective trial. On the other hand these data could be

  18. Geochemical insights into the provenance of large scale North Atlantic turbidites

    NASA Astrophysics Data System (ADS)

    Watts, Millie; Hunt, James; Talling, Peter; Allin, Josh; Pope, Ed

    2015-04-01

    The North Atlantic margin has been subject to several very large (>100 km3) submarine landslides. Motion of some of these slides has been shown to generate damaging tsunamis, which travelled long distances across the ocean, such as that generated by the Storegga slide at 8.15 ka BP. If such a tsunami occurred again, it would pose a major hazard to northern European coastlines. Therefore identifying the source and age of past slide deposits is important to quantifying the risk to UK and the rest of coastal Europe. In this study we analyse the distal deposits of slides (turbidites) to assess their provenance. We present initial results from a new shallow piston core dataset from the Storegga slide, Trænadjupet slide, Lofoten Drift and basin, and the outer edge of the Voring plateau. Turbidite mudcaps were analysed using both the non-destructive, semi-quantitative Itrax micro-XRF core scanner at BOSCORF for major elements. In addition ICP-MS was used to determine the rare earth element (REE) abundances, allowing the relationship of distal turbidite deposits to be established. REEs are a good source discriminator due to the stability and immobility of lanthanide group elements, and the preservation of elemental ratios during transport. Due to hydraulic fractionation only the finest mud fraction was analysed to avoid the bias associated with heavy mineral concentrations . Clusters of distinct elemental ratios indicate different provenances for the distal turbidites, notably the Eu/Eu* anomaly and (Gd/Yb)N. The clusters demonstrate each deposit has a unique geochemical signature and provide insights into the history of past large-volume slides in the region and the influence of contour current-reworking of deep-water deposits. The Norwegian margin has a long record of large-scale landslides, which are commonly linked to glacial-interglacial transitions. This margin is also an important location of deep-water formation, with strong currents capable of transporting

  19. Cenozoic sedimentation rates and provenance variations in the South Pacific Gyre

    NASA Astrophysics Data System (ADS)

    Dunlea, A. G.; Murray, R. W.; Sauvage, J.; Spivack, A. J.; Harris, R. N.; D'Hondt, S. L.

    2013-12-01

    Pelagic clays are traditionally difficult to date due to the scarcity of biogenic deposition and the prevalence of homogenous, altered, very fine-grain sediment. Integrated Ocean Drilling Program Expedition 329 recovered completely oxic, brown, pelagic zeolitic metalliferous clay from the South Pacific Gyre (SPG). Despite post-depositional alteration, the sediment retains enough of its original chemical signature to track downcore changes in provenance. Of particular interest is the cosmogenic portion of the sediment (e.g., Co), which we use to determine sedimentation rates and explore the paleoceanographic implications of changing sedimentation in the SPG throughout the Cenozoic. Under the assumption that the flux of extraterrestrial cosmogenic dust is spatially and temporally constant (or can at least be constrained), the concentration of cosmic dust in the sediment is inversely proportional to the sedimentation rate. Previous studies have used this premise to successfully date pelagic clays and Fe-Mn crusts, using Co as a proxy for cosmic dust deposition. The SPG has the slowest marine sedimentation rates in the world (as low as 0.1 m/Myr) and subsequently has the highest concentration of cosmic dust in the seafloor, making it an ideal region to apply this techniques. Building upon Zhou and Kyte (1992, Paleocean., 7, 441-465) at the single location of DSDP Site 596, we are dating SPG pelagic clays and identifying provenance variations throughout the SPG using a combined analytical and statistical approach. We analyze bulk sediment from Exp. 329 for a wide suite of major, trace, and rare earth elements by ICP-ES/MS. We apply multivariate statistical methods to quantify the contributions through time from various sources, aiming to distinguish a cosmogenic component. From the cosmogenic abundances, we produce a high-resolution record of instantaneous sedimentation rates of SPG pelagic clays during the Cenozoic. Our preliminary constant cosmogenic Co models show

  20. "Fingerprinting" tectono-magmatic provenance using trace elements in igneous zircon

    NASA Astrophysics Data System (ADS)

    Grimes, C. B.; Wooden, J. L.; Cheadle, M. J.; John, B. E.

    2015-12-01

    Over 5300 recent SHRIMP-RG analyses of trace elements (TE) in igneous zircon have been compiled and classified based on their original tectono-magmatic setting to empirically evaluate "geochemical fingerprints" unique to those settings. Immobile element geochemical fingerprints used for lavas are applied with the same rational to zircon, including consideration of mineral competition on zircon TE ratios, and new criteria for distinguishing mid-ocean ridge (MOR), magmatic arc, and ocean island (and other plume-influenced) settings are proposed. The elemental ratios in zircon effective for fingerprinting tectono-magmatic provenance are systematically related to lava composition from equivalent settings. Existing discrimination diagrams using zircon U/Yb versus Hf or Y do not distinguish TE-enriched ocean island settings (i.e., Iceland, Hawaii) from magmatic arc settings. However, bivariate diagrams with combined cation ratios involving U-Nb-Sc-Yb-Gd-Ce provide a more complete distinction of zircon from these settings. On diagrams of U/Yb versus Nb/Yb, most MOR, ocean island, and kimberlite zircon define a broad "mantle-zircon array"; arc zircon defines a parallel array offset to higher U/Yb. Distinctly low U/Yb ratios of MOR zircon (typically <0.1) mirror their parental magmas and long-term incompatible element depletion of the MORB mantle. Plume-influenced sources are distinguished from MOR by higher U/Yb, U/Nb, Nb/Yb, and Nb/Sc. For zircon with U/Yb > 0.1, high Sc/Yb separates arc settings from low-Sc/Yb plume-influenced sources. The slope of scandium enrichment trends in zircon differ between MOR and continental arc settings, likely reflecting the involvement of amphibole during melt differentiation. Scandium is thus also critical for discriminating provenance, but its behavior in zircon probably reflects contrasting melt fractionation trends between tholeiitic and calc-alkaline systems more than compositional differences in primitive magmas sourced at each

  1. Geochemistry and provenance of the Carboniferous Baixo Alentejo Flysch Group, South Portuguese Zone

    NASA Astrophysics Data System (ADS)

    Jorge, R. C. G. S.; Fernandes, P.; Rodrigues, B.; Pereira, Z.; Oliveira, J. T.

    2013-02-01

    This work is focused on the turbiditic sediments from the Carboniferous Baixo Alentejo Flysch Group (BAFG) in the South Portuguese Zone, an external zone of the Iberian Variscides. The aim of this work is to constrain the provenance and tectonic setting of these sediments in a context of a complex evolution of SW Iberian Variscides. For this purpose, we performed a systematic study of petrographical and geochemical signatures of greywackes and shales from the three BAFG formations: Mértola, Mira and Brejeira. Major and trace element composition and ratios suggest heterogeneous source area composition for BAFG shales and greywackes. For the oldest Mértola Formation greywackes, source area is dominated by granitoid rocks with minor mafic input. The latter becomes residual in the Mira Formation. The youngest Brejeira Formation greywackes show clear felsic affiliation associated with an increase in recycled components. The shales of all three BAFG formations denote a granodioritic affiliation. Chemical Index of Alteration (CIA) and Plagioclase Index of Alteration (PIA) values suggest moderate weathering in the source areas of Mértola and Mira formations. These indices, together with A-CN-K relations, point out to steady-state weathering conditions in the source areas of both formations. In contrast, both CIA and PIA values for the Brejeira Formation indicate variable conditions of palaeoweathering, from moderate to intense, as a consequence of non-steady-state conditions probably triggered by tectonic instability in the provenance area. Compared to the greywackes, the shales of all three BAFG formations exhibit higher CIA and PIA values, as well as low K2O/Al2O3 (~ 0.2) and index of compositional variability (< 1), reflecting the cumulative effect of multiple cycles of sedimentary recycling and prolonged chemical weathering history. Major and trace element distribution and upper continental crust-normalized multi-element plots suggest that the sediments of BAFG were

  2. Geochemically tracking provenance changes in marine sediment from the South Pacific Gyre throughout the Cenozoic

    NASA Astrophysics Data System (ADS)

    Dunlea, A. G.; Murray, R. W.; Sauvage, J.; Spivack, A. J.; Harris, R. N.; D'Hondt, S. L.

    2012-12-01

    The South Pacific Gyre (SPG), characterized by extremely slow sedimentation rates, is the world's largest oceanic desert. The little eolian dust from continents in the Southern Hemisphere must traverse great distances to reach the SPG, and the ultra-oligotrophic waters minimize the biogenic flux of sediment to the seafloor. However sparse, the pelagic sediment that is ultimately found on the seafloor retains a chemical record that can be used to trace its origin. Using cores from Integrated Ocean Drilling Program Expedition 329, we trace downcore fluctuations in major, trace, and rare earth element (REE) composition and flux to yield clues to the geological, chemical, and biological evolution of the SPG throughout the Cenozoic. The shipboard scientific party generally described the completely oxic, brown pelagic clays recovered during Exp. 329 as zeolitic metalliferous clay. The homogenous, very fine-grained nature of these sediments speaks to the challenges we face in resolving eolian detrital material ("dust"), fine-grained ash (commonly altered), and authigenic aluminosilicates from one another. Based on ICP-ES and ICP-MS analyses followed by multivariate statistical treatments, we are developing chemical records from a number of sites located throughout the SPG. Building on earlier work at DSDP Site 596 (Zhou and Kyte, 1992, Paleocean., 7, 441-465), and based on backtrack paths from 100 Ma forward, we are working to construct a regionally and temporally continuous paleoclimatological history of the SPG. Preliminary La-Th-Sc concentrations from Sites U1367, U1368, and U1369 show a distinct authigenic influence, but several refractory elements retain their original provenance signature. Sediment ages are constrained using a constant-Co model, based on the geochemically similar work that Zhou and Kyte (1992) performed in the SPG. REE concentrations normalized to post-archean average shale (PAAS) reveal a negative Ce anomaly that becomes more pronounced closer to

  3. Erosion in the Western Alps (Dora Baltea basin). 1. Quantifying sediment provenance

    NASA Astrophysics Data System (ADS)

    Vezzoli, Giovanni; Garzanti, Eduardo; Monguzzi, Stefano

    2004-10-01

    Sourced in the M. Bianco, the highest mountain of the Alps, the Dora Baltea River cuts across the arc of the Western Alps, drains all major Alpine tectonic units from the Helvetic domain to the South alpine domain, and finally joins the Po River. Petrographic composition of clastic detritus carried by the Dora Baltea River and its tributaries faithfully mirrors the complex geology of the Western Alps. High-resolution modal analysis of Dora Baltea sands allowed us to distinguish seven end-member metamorphoclastic provenances. River sands from the M. Bianco External Massif are dominated by quartz, feldspars, and hornblende. Detritus from basement and cover rocks of the Briançonnais zone includes low-grade metasedimentary lithic fragments, epidote, chloritoid, and garnet. Sands from the Internal Penninic Massifs include quartz and subordinate feldspars, garnet, and epidote. Abundant metabasite and serpentine-schist lithic grains, along with epidote, actinolite, and few pyroxenes, characterize detritus from the calcschists and meta-ophiolites of the oceanic Piemonte zone. Sands from the Austroalpine zone include quartz, abundant metamorphic lithic fragments, garnet, and locally significant sillimanite (Dent Blanche kinzigites). The relative contribution of each end member to the Dora Baltea sediment flux was assessed with forward modelling of end-member mixing. Our estimates, calculated from the entire petrographic and mineralogical data set, indicate that the main sources of bed load in the Dora Baltea mountain basin are the granitoid to gneissic rocks exposed in the M. Bianco Massif and in the Austroalpine zone. In order to make allowance for the contribution of a particular bedrock constituent in a compound source area to the derivative sand, the original concept of sand generation index (SGI) was modified to assess the relative contribution of the seven end-member sources of detritus. The highest total-basin SGI indices are calculated for the M. Bianco Massif (SGI

  4. Maximum sedimentation ages and provenance of metasedimentary rocks from Tinos Island, Cycladic blueschist belt, Greece

    NASA Astrophysics Data System (ADS)

    Hinsken, Tim; Bröcker, Michael; Berndt, Jasper; Gärtner, Claudia

    2016-10-01

    U-Pb zircon ages of five metasedimentary rocks from the Lower Unit on Tinos Island (Cycladic blueschist belt, Greece) document supply of detritus from various Proterozoic, Paleozoic and Mesozoic source rocks as well as post-depositional metamorphic zircon formation. Essential features of the studied zircon populations are Late Cretaceous (70-80 Ma) maximum sedimentation ages for the lithostratigraphic succession above the lowermost dolomite marble, significant contributions from Triassic to Neoproterozoic source rocks, minor influx of detritus recording Paleoproterozoic and older provenance (1.9-2.1, 2.4-2.5 and 2.7-2.8 Ga) and a lack or paucity of zircons with Mesoproterozoic ages (1.1-1.8 Ga). In combination with biostratigraphic evidence, the new dataset indicates that Late Cretaceous or younger rocks occur on top of or very close to the basal Triassic metacarbonates, suggesting a gap in the stratigraphic record near the base of the metamorphic succession. The time frame for sediment deposition is bracketed by the youngest detrital zircon ages (70-80 Ma) and metamorphic overgrowths that are related to high-pressure/low-temperature overprinting in the Eocene. This time interval possibly indicates a significant difference to the sedimentation history of the southern Cyclades, where Late Cretaceous detrital zircons have not yet been detected.

  5. Khnifiss Beach's Black Sand: Provenance and Transport Pathways Investigation Using Heavy Minerals' Characterization

    NASA Astrophysics Data System (ADS)

    Adnani, M.; Elbelrhiti, H.; Ahmamou, M.; Masmoudi, L.

    2014-12-01

    Arid areas in south of Morocco suffer from silting problem causing destruction of villages infrastructure, roads, agriculture land and oasis heritage. Black sand on Khnifiss beach near Tarfaya city (S-W Morocco) is marked by enrichment of heavy minerals. This later is an important fraction that could help to assess the provenance and transport pathways of sediment. The sand's origin investigation could be useful to fight against erosion and silting problems from the source of supply, to this end, mineralogical analysis was carried out in Khnifiss beach's sand using Optic Microscope and Scanning Electronic Microscope with dispersive energy (SEM- EDS), in addition to physico-chemical analysis provided by Electronic Microprobe. The results revealed: (i) a high grade of oxides (Rutile, Ilmenite, Magnetite, Ulvöspinel) in samples, (ii) silicates (Quartz, Clinopyroxene, feldspar, Zircon), (iii) phosphate (apatite) and (iv) carbonate (calcite). The dominance of iron oxides justifies the black sand's colour. Then, the mineral composition supposes interference between different origins: proximal source (Calcareous cliff) for calcite, distal sources of oxides and silicates are supposed to be eroded and carried by Drâa valley from granite and igneous rocks in Anti-Atlasic field. Another source supposed might be a proximal volcanic island (Canaries island).

  6. Provenance study of ancient Chinese Yaozhou porcelain by neutron activation analysis

    NASA Astrophysics Data System (ADS)

    Li, G. X.; Y Gao, Z.; Li, R. W.; Zhao, W. J.; Xie, J. Z.; Feng, S. L.; Zhuo, Z. X.; Y Fan, D.; Zhang, Y.; Cai, Z. F.; Liu, H.

    2003-09-01

    This paper reports our study of the provenance of ancient Chinese Yaozhou porcelain. The content of 29 elements in the Yaozhou porcelain samples was measured by neutron activation analysis (NAA). The NAA data were further analysed using fuzzy cluster analysis to obtain the trend fuzzy cluster diagrams. These samples with different glaze colour, ranging over more than 700 years, were fired in different kilns. Our analysis indicates the relatively concentrated distribution of the sources of the raw material for the Yaozhou porcelain body samples. They can be classified into two independent periods, i.e. the Tang (AD 618-907) and the Five Dynasties (AD 907-960) period, and the Song (AD 960-1279) and Jin (AD 1115-1234) period. Our analysis also indicates that the sources of the raw material for the ancient Yaozhou porcelain glaze samples are quite scattered and those for the black glaze in the Tang Dynasty are very concentrated. The sources of the raw material for the celadon glaze and the white glaze in the Tang Dynasty are widely distributed and those for the celadon glaze in the Song Dynasty are close to those of the bluish white glaze in the Jin Dynasty, and they are very concentrated. The sources of the raw material for the porcelain glazes cover those of the porcelain bodies.

  7. Password-Only Authenticated Three-Party Key Exchange Proven Secure against Insider Dictionary Attacks

    PubMed Central

    Nam, Junghyun; Choo, Kim-Kwang Raymond

    2014-01-01

    While a number of protocols for password-only authenticated key exchange (PAKE) in the 3-party setting have been proposed, it still remains a challenging task to prove the security of a 3-party PAKE protocol against insider dictionary attacks. To the best of our knowledge, there is no 3-party PAKE protocol that carries a formal proof, or even definition, of security against insider dictionary attacks. In this paper, we present the first 3-party PAKE protocol proven secure against both online and offline dictionary attacks as well as insider and outsider dictionary attacks. Our construct can be viewed as a protocol compiler that transforms any 2-party PAKE protocol into a 3-party PAKE protocol with 2 additional rounds of communication. We also present a simple and intuitive approach of formally modelling dictionary attacks in the password-only 3-party setting, which significantly reduces the complexity of proving the security of 3-party PAKE protocols against dictionary attacks. In addition, we investigate the security of the well-known 3-party PAKE protocol, called GPAKE, due to Abdalla et al. (2005, 2006), and demonstrate that the security of GPAKE against online dictionary attacks depends heavily on the composition of its two building blocks, namely a 2-party PAKE protocol and a 3-party key distribution protocol. PMID:25309956

  8. Provenance characterization of Appalachian clastic wedges from sandstone petrography and clast compositions

    SciTech Connect

    Eriksson, K.A. . Dept. of Geological Science); Simpson, E.L. . Dept. of Physical Science); Krogstad, E.J. . Dept. of Geology); McLennan, S.M. . Dept. of Earth and Space Science); Norman, M. )

    1994-03-01

    Sandstones in the Taconic, Acadian and Alleghanian clastic wedges in the Appalachian Orogenic Belt provide evidence for changing provenances during the late Ordovician through pennsylvanian, Neoproterozoic-Early Cambrian, synrift sandstones are predominantly feldspathic arenites, whereas quartz arenites typify sandstones in the Cambrian passive-margin prism. In contrast, sandstones in the overlying foreland-basin clastic wedges typically are lithic arenites and occupy the quartzose to lithic recycled fields on QmFLt diagrams. Mid-Ordovician lithic arenites (Knobs, Bays Fms.) are dominated by a variety of sedimentary rock fragments including feldspathic and quartz arenites, limestone, dolomite and chert. Conglomerates in the Bays Formation similarly are dominated by recycled sedimentary clasts; gneiss clasts are only rarely observed. Above a regional unconformity in the middle Tuscarora formation, a succession of quartz arenites (upper Tuscarora, Rose Hill and Eagle Rock Fms.) developed in response to prolonged reworking. Overlying lithic arenites (Middle Devonian-Pennsylvanian) contain a variety of metamorphic rock fragments including quartz-mica schist, strained and polycrystalline quartz, and detrital mica. Sandstone petrography and clast compositions thus indicate that the Taconic orogeny involved uplift of the older passive-margin prism in a fold-and-thrust belt or accretionary prism. Coarse-grained sedimentary rocks provide no evidence of an arc to the east. Mature Silurian sandstones record an inter-orogenic, quiescent phase of the Appalachian Orogeny.

  9. Safety and Efficacy of Intravenous Colistin in Neonates With Culture Proven Sepsis

    PubMed Central

    Serafettin Tekgunduz, Kadir; Kara, Mustafa; Caner, Ibrahim; Demirelli, Yasar

    2015-01-01

    Background: Although it is well described among adults, intravenous colistin use and its associated toxicities in newborns are poorly understood. Objectives: We present our experience of efficacy and safety of intravenous colistin in the treatment of sepsis in term and preterm neonates. Patients and Methods: The records of neonates who received colistin between January 2013 and February 2014 were retrospectively reviewed. All neonates with culture proven nosocomial infections due to multidrug resistant organisms and treated continuously with colistin for more than 72 hours were included in the study. Results: Patients were evaluated for clinical and microbiological response to the drug and its and side effects. Twelve newborn infants with mean 31.8 ± 3.5 weeks gestational age and median 1482 (810 - 3200) gram birth weight were included. 11/12 (91.7%) patients showed microbiological clearance with intravenous colistin. One patient who had recurrent cerebrospinal fluid positive culture was treated with intraventricular colistin. The major side effects observed was hyponatremia and hypokalemia in 2 (16.6%) patients, all infants required magnesium supplementation. Conclusions: Intravenous colistin administration appears to be safe and efficacious for multidrug-resistant gram-negative infections in neonates, including preterm infants. However, we believe that large prospective controlled studies are needed to confirm its efficacy and safety in neonates. PMID:26396706

  10. Prevalence of dietary supplement use in patients with proven or suspected cardiovascular disease.

    PubMed

    Bin, Yu Sun; Kiat, Hosen

    2011-01-01

    Systematic search of bibliographic databases was conducted to describe the prevalence of dietary supplement use in cardiac patients. Included for review were studies that investigated supplement use in people with cardiovascular risk factors or proven cardiovascular disease. Databases searched were Medline, EMBASE, CINAHL, AMED, Meditext, H&S and IPA. Over five hundred articles were retrieved and twenty studies met the criteria for this review. Dietary supplements were taken by a median 36% (interquartile range: 26-42%) of cardiac patients; 36% (IQR 18-43%) reported taking a vitamin/mineral supplement and 12% (IQR 7-21%) used herbal supplements. Many users indicated that supplements were taken specifically for heart health and 16-64% of users reported using supplements alongside prescription medications. However 39-95% of treating physicians were unaware of patients' supplement use. Dietary supplement use in patients with cardiovascular disease appears common, as does the concurrent use of supplements with prescription medicines. This information is often not communicated to doctors and treating physicians may need to be more proactive in asking about supplement use.

  11. High prevalence of complementary and alternative medicine use in patients with genetically proven mitochondrial disorders.

    PubMed

    Franik, Sebastian; Huidekoper, Hidde H; Visser, Gepke; de Vries, Maaike; de Boer, Lonneke; Hermans-Peters, Marion; Rodenburg, Richard; Verhaak, Chris; Vlieger, Arine M; Smeitink, Jan A M; Janssen, Mirian C H; Wortmann, Saskia B

    2015-05-01

    Despite major advances in understanding the pathophysiology of mitochondrial diseases, clinical management of these conditions remains largely supportive, and no effective treatment is available. We therefore assumed that the burden of disease combined with the lack of adequate treatment leaves open a big market for complementary and alternative medicine use. The objective of this study was to evaluate the use and perceived effectiveness of complementary and alternative medicine in children and adults with genetically proven mitochondrial disease. The reported use was surprisingly high, with 88% of children and 91% of adults having used some kind of complementary and alternative medicine in the last 2 years. Also, the mean cost of these treatments was impressive, being 489/year for children and 359/year for adult patients. Over-the-counter remedies (e.g., food supplements, homeopathy) and self-help techniques (e.g., Reiki, yoga) were the most frequently used complementary and alternative therapies in our cohort: 54% of children and 60% of adults reported the various complementary and alternative medicine therapies to be effective. Given the fact that currently no effective treatment exists, further research toward the different therapies is needed, as our study clearly demonstrates that such therapies are highly sought after by affected patients.

  12. Immunosuppression status of liver transplant recipients with hepatitis C affects biopsy-proven acute rejection

    PubMed Central

    Kim, Jong Man; Lee, Kwang-Woong; Song, Gi-Won; Jung, Bo-Hyun; Lee, Hae Won; Yi, Nam-Joon; Kwon, ChoonHyuck David; Hwang, Shin; Suh, Kyung-Suk; Joh, Jae-Won; Lee, Suk-Koo; Lee, Sung-Gyu

    2016-01-01

    Background/Aims The relationship between patient survival and biopsy-proven acute rejection (BPAR) in liver transplant recipients with hepatitis C remains unclear. The aims of this study were to compare the characteristics of patients with and without BPAR and to identify risk factors for BPAR. Methods We retrospectively reviewed the records of 169 HCV-RNA-positive patients who underwent LT at three centers. Results BPAR occurred in 39 (23.1%) of the HCV-RNA-positive recipients after LT. The 1-, 3-, and 5-year survival rates were 92.1%, 90.3%, and 88.5%, respectively, in patients without BPAR, and 75.7%, 63.4%, and 58.9% in patients with BPAR (P<0.001). Multivariate analyses showed that BPAR was associated with the non-use of basiliximab and tacrolimus and the use of cyclosporin in LT recipients with HCV RNA-positive. Conclusion The results of the present study suggest that the immunosuppression status of HCV-RNA-positive LT recipients should be carefully determined in order to prevent BPAR and to improve patient survival. PMID:27729628

  13. Terrigenous sediment provenance from geochemical tracers, south Molokai reef flat, Hawaii

    USGS Publications Warehouse

    Takesue, R.K.

    2010-01-01

    Land-derived runoff is one of the greatest threats to coral-reef health. Identification of runoff sources is an important step in erosion mitigation efforts. A geochemical sediment provenance study was done in uplands and across the adjacent fringing reef on the southeast shore of Molokai, Hawaii, to determine whether sediment runoff originated from hillsides or gulches. Source-region identification was based on geochemical differences between alkalic basalt, which outcrops on hillsides, and tholeiitic basalt, which outcrops in gulches. In Kawela watershed, copper to iron ratios (Cu/Fe) were distinct in hillside soil versus gulch sediment and suggest that hillside erosion is the predominant mechanism of sediment delivery to the nearshore. This suggests that runoff-mitigation efforts should take steps to reduce hillside erosion. Cadmium to thorium ratios (Cd/Th) in nearshore sediment suggest that there is a high-Cd source of runoff east of Kamalo Gulch. This compositional difference is consistent with the predominance of tholeiitic basalt on the eastern end of Molokai.

  14. Holocene regional gradients of dust provenance and flux between Talos Dome and Dome C, East Antarctica.

    NASA Astrophysics Data System (ADS)

    Delmonte, B.; Andersson, P. S.; Baroni, C.; Narcisi, B.; Petit, J. R.; Salvatore, M. C.; Albani, S.; Maggi, V.

    2012-04-01

    Aeolian sequences from Central East Antarctic ice cores provide climate and environmental information of hemispheric significance. Close to the margins of the ice sheet, high-elevation ice-free terrains protruding above the ice sheet surface can provide an additional input of fine dust particles to the atmosphere, making peripheral locations particularly interesting for the study of the regional climate evolution. In the Talos Dome area of East Antarctica, entrainment and transport of local mineral particles is merely influenced by local wind direction and strength, which in turn is tuned by regional climate changes. We investigate the spatial variability of modern and Holocene dust flux, grain size and isotopic (Sr-Nd) composition along a hypothetic transect from Talos Dome all through the interior of the ice sheet (Dome C/Vostok area), and compare the geochemical fingerprint of dust extracted from firn and ice cores to the equivalent size fraction of regolith and glacial deposits from high altitude Victoria Land sources. This study aims to better understand the environmental gradients of dust flux and provenance from the marginal Talos Dome site to the higher Dome C drainage area, with implications for the regional atmospheric circulation, while documenting the isotopic composition of local exposed sediments.

  15. Provenance of Gebel El-Zeit sandstones, gulf of Suez, Egypt

    NASA Astrophysics Data System (ADS)

    Abdel-Wahab, Antar A.

    1992-01-01

    The Paleozoic elastic succession at Gebel Zeit chiefly consists of fine- to medium-grained quartz arenite, locally containing well-rounded quartz pebbles. The marine Araba Formation (Early Cambrian) was deposited during transgression over a Precambrian granite. The overlying Naqus Formation (Late Cambrian) is fluvial, except for the uppermost few meters. Paleocurrent data for the Araba and Naqus formations indicate derivation from the north-northeast and south-southwest respectively. Quartz typology, other morphologic features of quartz, and mineral inclusions in quartz, as well as the study of heavy minerals were used to determine the provenance of the sandstones. Quartz typology successfully identified a granitic source for the Araba Formation. A combination of parameters indicates that the Naqus Formation was derived chiefly from a metamorphic terrain. Two ratios, polycrystalline/monocrystalline quartz and undulose/non-undulose quartz, successfully distinguish sandstones of the Araba Formation from those of the Naqus Formation. These values are 0.14 and 0.25 for Araba sandstones and 0.26 and 0.46 for Naqus sandstones, respectively. These differences either reflect different source rocks, or have resulted from selective abrasion loss of polycrystalline quartz in the rigorous surf zone during the marine transgression that deposited the Araba Formation.

  16. A mechanism for proven technology foresight for emerging fast reactor designs and concepts

    NASA Astrophysics Data System (ADS)

    Anuar, Nuraslinda; Muhamad Pauzi, Anas

    2016-01-01

    The assessment of emerging nuclear fast reactor designs and concepts viability requires a combination of foresight methods. A mechanism that allows for the comparison and quantification of the possibility of being a proven technology in the future, β for the existing fast reactor designs and concepts is proposed as one of the quantitative foresight method. The methodology starts with the identification at the national or regional level, of the factors that would affect β. The factors are then categorized into several groups; economic, social and technology elements. Each of the elements is proposed to be mathematically modelled before all of the elemental models can be combined. Once the overall β model is obtained, the βmin is determined to benchmark the acceptance as a candidate design or concept. The β values for all the available designs and concepts are then determined and compared with the βmin, resulting in a list of candidate designs that possess the β value that is larger than the βmin. The proposed methodology can also be applied to purposes other than technological foresight.

  17. Proven, long-life hydrogen/oxygen thrust chambers for space station propulsion

    NASA Technical Reports Server (NTRS)

    Richter, G. P.; Price, H. G.

    1986-01-01

    The development of the manned space station has necessitated the development of technology related to an onboard auxiliary propulsion system (APS) required to provide for various space station attitude control, orbit positioning, and docking maneuvers. A key component of this onboard APS is the thrust chamber design. To develop the required thrust chamber technology to support the Space Station Program, the NASA Lewis Research Center has sponsored development programs under contracts with Aerojet TechSystems Company and with Bell Aerospace Textron Division of Textron, Inc. During the NASA Lewis sponsored program with Aerojet TechSystems, a 25 lb sub f hydrogen/oxygen thruster has been developed and proven as a viable candidate to meet the needs of the Space Station Program. Likewise, during the development program with Bell Aerospace, a 50 lb sub f hydrogen/oxygen Thrust Chamber has been developed and has demonstrated reliable, long-life expectancy at anticipated space station operating conditions. Both these thrust chambers were based on design criteria developed in previous thruster programs and successfully verified in experimental test programs. Extensive thermal analyses and models were used to design the thrusters to achieve total impulse goals of 2 x 10 to the 6th power lb sub f-sec. Test data for each thruster will be compared to the analytical predictions for the performance and heat transfer characteristics. Also, the results of thrust chamber life verification tests will be presented.

  18. Deep water provenance and dynamics of the (de)glacial Atlantic meridional overturning circulation

    NASA Astrophysics Data System (ADS)

    Lippold, Jörg; Gutjahr, Marcus; Blaser, Patrick; Christner, Emanuel; de Carvalho Ferreira, Maria Luiza; Mulitza, Stefan; Christl, Marcus; Wombacher, Frank; Böhm, Evelyn; Antz, Benny; Cartapanis, Olivier; Vogel, Hendrik; Jaccard, Samuel L.

    2016-07-01

    Reconstructing past modes of ocean circulation is an essential task in paleoclimatology and paleoceanography. To this end, we combine two sedimentary proxies, Nd isotopes (εNd) and the 231Pa/230Th ratio, both of which are not directly involved in the global carbon cycle, but allow the reconstruction of water mass provenance and provide information about the past strength of overturning circulation, respectively. In this study, combined 231Pa/230Th and εNd down-core profiles from six Atlantic Ocean sediment cores are presented. The data set is complemented by the two available combined data sets from the literature. From this we derive a comprehensive picture of spatial and temporal patterns and the dynamic changes of the Atlantic Meridional Overturning Circulation over the past ∼25 ka. Our results provide evidence for a consistent pattern of glacial/stadial advances of Southern Sourced Water along with a northward circulation mode for all cores in the deeper (>3000 m) Atlantic. Results from shallower core sites support an active overturning cell of shoaled Northern Sourced Water during the LGM and the subsequent deglaciation. Furthermore, we report evidence for a short-lived period of intensified AMOC in the early Holocene.

  19. Prediction of Uncertainty in Watershed Scale Sediment Provenance Model Using Tracers

    NASA Astrophysics Data System (ADS)

    Ahmed, I.; Karim, A.; Boutton, T. W.; Strom, K.

    2014-12-01

    The study, conducted on the urbanized Buffalo Bayou Watershed in Harris County, Texas, draws on two methods to quantify and compare the uncertainties in sediment fingerprint or provenance model. There are two sources of uncertainty. One is from the physically based watershed sediment yield model due to spatial variation in the watershed terrain slopes. The other is from the use of long-range episodic rainfall time series data. The work finds the Bayesian Markov Chain Monte Carlo (MCMC) method as more mathematically robust compared with the traditional optimization based Monte Carlo Simulation (MCS) method for prediction of sediment yield fraction estimate uncertainty. Thereby, the work attempts to close the existing gap in research in this area of uncertainty comparison. The link between Markov Chain rainfall time series and the Bayesian MCMC simulation model is established using an erosion process parameter that promotes uncertainty in the statistical soil yield fraction estimates. The research hypothesis was tested using physical and statistical computational models in soil erosion and geostatistics with the use of rain gauge data and soil biogeochemical properties.

  20. Venezuela near doubles proven reserves. 2. US protectionism and the geopolitics of petro-geology

    SciTech Connect

    Not Available

    1987-03-11

    This issue honors the late Dan Lundberg, founder and former publisher of Energy Detente (ED). Mr. Lundberg founded ED a few months after his first visit to Venezuela in December 1979 and attending his first OPEC meeting. His acute awareness of factors affecting crises in oil markets was combined permanently in the publication founded in 1980, and it was designed from the very first to illuminate Western hemisphere and especially still-undeveloped hydrocarbon resources. Two unrelated events are treated as very much related in this issue: (A) The USA National Petroleum Council released Factors Affecting US Oil and Gas Outlook. (B) Almost simultaneously Petroleos de Venezuela, the national oil company of Venezuela released its new proven oil figures, close to 90% higher, at 55.5 billion barrels. The possible importance to US foreign policy is discussed. This issue of ED also contains: (1) ED refining netback data for the US Gulf and West Coasts, Rotterdam, and Singapore for mid March 1987; and (2) the ED fuel price/tax series March 1987 edition for countries of the Western Hemisphere. 8 figures, 6 tables.

  1. Provenance matters: thermal reaction norms for embryo survival among sockeye salmon Oncorhynchus nerka populations.

    PubMed

    Whitney, C K; Hinch, S G; Patterson, D A

    2013-04-01

    Differences in thermal tolerance during embryonic development in Fraser River sockeye salmon Oncorhynchus nerka were examined among nine populations in a controlled common-garden incubation experiment. Forcing embryonic development at an extreme temperature (relative to current values) of 16° C, representing a future climate change scenario, significantly reduced survival compared to the more ecologically moderate temperature of 10° C (55% v. 93%). Survival at 14° C was intermediate between the other two temperatures (85%). More importantly, this survival response varied by provenance within and between temperature treatments. Thermal reaction norms showed an interacting response of genotype and environment (temperature), suggesting that populations of O. nerka may have adapted differentially to elevated temperatures during incubation and early development. Moreover, populations that historically experience warmer incubation temperatures at early development displayed a higher tolerance for warm temperatures. In contrast, thermal tolerance does not appear to transcend life stages as adult migration temperatures were not related to embryo thermal tolerance. The intra-population variation implies potential for thermal tolerance at the species level. The differential inter-population variation in thermal tolerance that was observed suggests, however, limited adaptive potential to thermal shifts for some populations. This infers that the intergenerational effects of increasing water temperatures may affect populations differentially, and that such thermally mediated adaptive selection may drive population, and therefore species, persistence. PMID:23557297

  2. Taxonomic revision and stratigraphic provenance of 'Histiophorus rotundu' Woodward 1901 (Teleostei, Perciformes)

    USGS Publications Warehouse

    Monsch, K.A.; Fierstine, H.L.; Weems, R.E.

    2005-01-01

    Until recently, Histiophorus rotundus Woodward 1901, was known from a single, poorly preserved rostrum from the Tertiary phosphate beds near Charleston, South Carolina, an area from which many fossils have been described. The specimen is relatively featureless externally; its internal anatomy is unknown and the documentation of its geological provenance was poor. In an earlier revision the species was transferred to the fossil billfish genus Xiphiorhynchus Van Beneden, 1871. Here we confirm this designation, supported by new morphological studies of the holotype, recently found specimens of Xiphiorhynchus rotundus (Woodward, 1901), and the stratigraphic record of Xiphiorhynchus. The systematic paleontology we present is a contribution to the taxonomic revision of billfishes world-wide. Because the holotype is heavily phosphatized and the type locality was vaguely described, we discuss the geology of the phosphate mining districts of the Charleston region. Based on our studies, we can narrow the possible age of the holotype to late Oligocene or early Miocene. We suggest X. rotundus was extinct by the Burdigalian. 

  3. Paleoclimatic, paleovegetational and provenance change in the Ganga Plain during the late Quaternary

    NASA Astrophysics Data System (ADS)

    Agrawal, Shailesh; Sanyal, Prasanta; Bera, Melinda K.; Dash, Jitendra K.; Balakrishnan, Srinivasan

    2013-08-01

    Present study aims at reconstructing the paleomonsoonal rainfall, paleovegetation and provenance change during the late Quaternary. Towards this, Bhognipur core, collected from the southern Ganga Plain, have been sampled for soil carbonate (SC) and soil. The δ 18O values of SC ( δ 18OSC) range from -7.6 to -4.9‰. The variations in δ 18OSC values suggest that during the late Quaternary, the monsoon intensified during MIS 3 and MIS 1 and the maximum lowering of rainfall intensity is observed during MIS 2. The δ 13C value of SC ( δ 13CSC), organic matter dispersed in the soil ( δ 13CSOM) and occluded in the carbonate nodules ( δ 13CNOM) ranges from -4.1 to +1.4‰, -25.6 to -16.3‰, and -27.7 to -25.0‰, respectively, implies mixed C3-C4 vegetation over the Ganga Plain. Variations in δ 13CSOM and δ 13CNOM values at same depth imply preservation problem of pristine organic matter signature. Therefore, it is important to assess the preservation of residual organic matter before using it for paleovegetational reconstruction. The monsoon-vegetation relationship indicates that relative abundances of C3-C4 vegetation were mainly driven by variations in monsoonal rainfall intensity. Using 87Sr/86Sr in SC, we show that the Himalayan river was supplying sediments in the southern part of the Ganga Plain during MIS 3.

  4. Clay mineral distribution and provenance in the Heuksan mud belt, Yellow Sea

    NASA Astrophysics Data System (ADS)

    Cho, Hyen Goo; Kim, Soon-Oh; Kwak, Kyeong Yoon; Choi, Hunsoo; Khim, Boo-Keun

    2015-12-01

    The Heuksan mud belt (HMB), located in the southeastern Yellow Sea, runs parallel to the southwest coast of Korea. In this study, the distribution and relative contribution of four major clay minerals are investigated using 101 surface sediment samples collected in the course of KIOST (2001, 2010, 2011) and KIGAM (2012) cruises, as well as 33 river sediment samples (four from the Huanghe River, three from the Changjiang River, and 26 from Korean rivers) in order to clarify the provenance of fine-grained sediments in the HMB. Based on this currently largest and most robust dataset available for interpretation, the clay mineral assemblages of the fine-grained sediments in the HMB are found to be on average composed of 64.7% illite, 17.9% chlorite, 11.4% kaolinite, and 5.9% smectite. Overall, the clay mineral assemblages are similar in both the northern and the southern parts of the HMB, although smectite seems to be relatively enriched in the southern part, whereas kaolinite is slightly more dominant in the northern part. This clearly indicates that the clays are mostly derived from Korean rivers and, in the southern part of the HMB, partly also from the Huanghe River in China. The new data thus confirm and strengthen the tentative interpretation of some earlier work based on a more limited dataset.

  5. Provenance and tectonic significance of the Palaeoproterozoic metasedimentary successions of central and nothern Madagascar

    USGS Publications Warehouse

    De Waele, B.; Thomas, Ronald J.; Macey, P.H.; Horstwood, M.S.A.; Tucker, R.D.; Pitfield, P.E.J.; Schofield, D.I.; Goodenough, K.M.; Bauer, W.; Key, R.M.; Potter, C.J.; Armstrong, R.A.; Miller, J.A.; Randriamananjara, T.; Ralison, V.; Rafahatelo, J.-M.; Rabarimanana, M.; Bejoma, M.

    2011-01-01

    New detrital zircon U–Pb age data obtained from various quartzite units of three spatially separated supracrustal packages in central and northern Madagascar, show that these units were deposited between 1.8 and 0.8 Ga and have similar aged provenances. The distribution of detrital zircon ages indicates an overwhelming contribution of sources with ages between 2.5 and 1.8 Ga. Possible source rocks with an age of 2.5 Ga are present in abundance in the crustal segments (Antananarivo, Antongil and Masora Domains) either side of a purported Neoproterozoic suture ("Betsimisaraka Suture Zone"). Recently, possible source rocks for the 1.8 Ga age peak have been recognised in southern Madagascar. All three supracrustal successions, as well as the Archaean blocks onto which they were emplaced, are intruded by mid-Neoproterozoic magmatic suites placing a minimum age on their deposition. The similarities in detrital pattern, maximum and minimum age of deposition in the three successions, lend some support to a model in which all of Madagascar's Archaean blocks form a coherent crustal entity (the Greater Dharwar Craton), rather than an amalgamate of disparate crustal blocks brought together only during Neoproterozoic convergence. However, potential source terranes exist outside Madagascar and on either side of the Neoproterozoic sutures, so that a model including a Neoproterozoic suture in Madagascar cannot be dispelled outright.

  6. Password-only authenticated three-party key exchange proven secure against insider dictionary attacks.

    PubMed

    Nam, Junghyun; Choo, Kim-Kwang Raymond; Paik, Juryon; Won, Dongho

    2014-01-01

    While a number of protocols for password-only authenticated key exchange (PAKE) in the 3-party setting have been proposed, it still remains a challenging task to prove the security of a 3-party PAKE protocol against insider dictionary attacks. To the best of our knowledge, there is no 3-party PAKE protocol that carries a formal proof, or even definition, of security against insider dictionary attacks. In this paper, we present the first 3-party PAKE protocol proven secure against both online and offline dictionary attacks as well as insider and outsider dictionary attacks. Our construct can be viewed as a protocol compiler that transforms any 2-party PAKE protocol into a 3-party PAKE protocol with 2 additional rounds of communication. We also present a simple and intuitive approach of formally modelling dictionary attacks in the password-only 3-party setting, which significantly reduces the complexity of proving the security of 3-party PAKE protocols against dictionary attacks. In addition, we investigate the security of the well-known 3-party PAKE protocol, called GPAKE, due to Abdalla et al. (2005, 2006), and demonstrate that the security of GPAKE against online dictionary attacks depends heavily on the composition of its two building blocks, namely a 2-party PAKE protocol and a 3-party key distribution protocol.

  7. Academic Provenance: Mapping Geoscience Students' Academic Pathways to their Career Trajectories

    NASA Astrophysics Data System (ADS)

    Houlton, H. R.; Gonzales, L. M.; Keane, C. M.

    2011-12-01

    Targeted recruitment and retention efforts for the geosciences have become increasingly important with the growing concerns about program visibility on campuses, and given that geoscience degree production remains low relative to the demand for new geoscience graduates. Furthermore, understanding the career trajectories of geoscience degree recipients is essential for proper occupational placement. A theoretical framework was developed by Houlton (2010) to focus recruitment and retention efforts. This "pathway model" explicitly maps undergraduate students' geoscience career trajectories, which can be used to refine existing methods for recruiting students into particular occupations. Houlton's (2010) framework identified three main student population groups: Natives, Immigrants or Refugees. Each student followed a unique pathway, which consisted of six pathway steps. Each pathway step was comprised of critical incidents that influenced students' overall career trajectories. An aggregate analysis of students' pathways (Academic Provenance Analysis) showed that different populations' pathways exhibited a deviation in career direction: Natives indicated intentions to pursue industry or government sectors, while Immigrants intended to pursue academic or research-based careers. We expanded on Houlton's (2010) research by conducting a follow-up study to determine if the original participants followed the career trajectories they initially indicated in the 2010 study. A voluntary, 5-question, short-answer survey was administered via email. We investigated students' current pathway steps, pathway deviations, students' goals for the near future and their ultimate career ambitions. This information may help refine Houlton's (2010) "pathway model" and may aid geoscience employers in recruiting the new generation of professionals for their respective sectors.

  8. Geoscience Academic Provenance: A Theoretical Framework for Understanding Geoscience Students' Pathways

    NASA Astrophysics Data System (ADS)

    Houlton, H.; Keane, C.

    2012-04-01

    The demand and employment opportunities for geoscientists in the United States are projected to increase 23% from 2008 to 2018 (Gonzales, 2011). Despite this trend, there is a disconnect between undergraduate geoscience students and their desire to pursue geoscience careers. A theoretical framework was developed to understand the reasons why students decide to major in the geosciences and map those decisions to their career aspirations (Houlton, 2010). A modified critical incident study was conducted to develop the pathway model from 17, one-hour long semi-structured interviews of undergraduate geoscience majors from two Midwest Research Institutions (Houlton, 2010). Geoscience Academic Provenance maps geoscience students' initial interests, entry points into the major, critical incidents and future career goals as a pathway, which elucidates the relationships between each of these components. Analyses identified three geoscience student population groups that followed distinct pathways: Natives, Immigrants and Refugees. A follow up study was conducted in 2011 to ascertain whether these students continued on their predicted pathways, and if not, reasons for attrition. Geoscientists can use this framework as a guide to inform future recruitment and retention initiatives and target these geoscience population groups for specific employment sectors.

  9. Provenance studies on Dead Sea scrolls parchment by means of quantitative micro-XRF.

    PubMed

    Wolff, Timo; Rabin, Ira; Mantouvalou, Ioanna; Kanngiesser, Birgit; Malzer, Wolfgang; Kindzorra, Emanuel; Hahn, Oliver

    2012-02-01

    In this study, we address the question of the provenance and origin of the Dead Sea Scrolls manuscripts. A characteristic low ratio of chlorine to bromine, corresponding to that of the Dead Sea water, may serve as an indicator for local production. For this aim we developed a non-destructive procedure to determine the Cl/Br ratio in the parchment of these manuscripts. Micro-X-ray fluorescence (μ-XRF) measurements of a large number of parchment and leather fragments from the Dead Sea Scrolls were analyzed with a routine we developed based on fundamental parameter quantification. This routine takes into account the absorption of the collagen matrix and the influence of the different sample thicknesses. To calculate the representative Cl/Br ratio for each fragment, we investigated the lateral homogeneity and determined the total mass deposition using the intensity of the inelastically scattered, characteristic tube radiation. The distribution of the Cl/Br ratios thus obtained from the μ-XRF measurements make it possible to distinguish fragments whose origin lies within the Dead Sea region from those produced in other locations.

  10. Maximum sedimentation ages and provenance of metasedimentary rocks from Tinos Island, Cycladic blueschist belt, Greece

    NASA Astrophysics Data System (ADS)

    Hinsken, Tim; Bröcker, Michael; Berndt, Jasper; Gärtner, Claudia

    2015-10-01

    U-Pb zircon ages of five metasedimentary rocks from the Lower Unit on Tinos Island (Cycladic blueschist belt, Greece) document supply of detritus from various Proterozoic, Paleozoic and Mesozoic source rocks as well as post-depositional metamorphic zircon formation. Essential features of the studied zircon populations are Late Cretaceous (70-80 Ma) maximum sedimentation ages for the lithostratigraphic succession above the lowermost dolomite marble, significant contributions from Triassic to Neoproterozoic source rocks, minor influx of detritus recording Paleoproterozoic and older provenance (1.9-2.1, 2.4-2.5 and 2.7-2.8 Ga) and a lack or paucity of zircons with Mesoproterozoic ages (1.1-1.8 Ga). In combination with biostratigraphic evidence, the new dataset indicates that Late Cretaceous or younger rocks occur on top of or very close to the basal Triassic metacarbonates, suggesting a gap in the stratigraphic record near the base of the metamorphic succession. The time frame for sediment deposition is bracketed by the youngest detrital zircon ages (70-80 Ma) and metamorphic overgrowths that are related to high-pressure/low-temperature overprinting in the Eocene. This time interval possibly indicates a significant difference to the sedimentation history of the southern Cyclades, where Late Cretaceous detrital zircons have not yet been detected.

  11. Petrography and provenance of sandstone, Sunnyside oil-impregnated deposit, Uinta basin, Utah

    SciTech Connect

    Picard, M.D.; Banks, E.Y.

    1986-05-01

    The Sunnyside oil-impregnated arkosic sandstone deposit (Eocene) is located on the southwestern edge of the Uinta basin, northeastern Utah. It is a giant deposit with more than 4.5 billion bbl of in-place bitumen. Thin section, microprobe, and heavy-mineral analyses indicate a mixed provenance of crystalline and sedimentary sources. Primary crystalline detritus was derived from southwestern Colorado several hundred miles distant, sedimentary detritus from locally adjacent Colorado Plateau uplifts. The sandstone was deposited in meandering fluvial settings. Lacustrine rocks of the Green River Formation overlie and underlie and are occasionally interbedded with the fluvial rocks. The average paleocurrent direction is N45/sup 0/E, indicating a source to the southwest. The incongruent relationship between the average paleocurrent direction and postulated source areas is probably related to the presence of the San Rafael swell upwarp, and to the influence on the drainage pattern by streams that drained the orogenic highlands of western Utah and joined the major north-flowing drainage at the northern end of the San Rafael swell. Migration of bitumen into the rocks at Sunnyside from lacustrine sources occurred after authigenic development of spar-size dolomite rhombs, syntaxial albite and quartz overgrowths, and hematite. Development of calcite cement may be related to the introduction of bitumen and associated pore fluids into the sandstone. Correlation of bitumen content with textural data is weak. Incomplete saturation of rocks by bitumen prevents a determination of the effect of mean grain size and percent matrix on saturation.

  12. Pattern of biopsy proven renal diseases at PNS SHIFA, Karachi: A cross-sectional survey

    PubMed Central

    Sabir, Sohail; Mubarak, Muhammed; Ul-Haq, Irfan; Bibi, Aisha

    2013-01-01

    Introduction: Percutaneous renal biopsy (RB) is an invaluable diagnostic procedure in patients with medical renal diseases.Objectives: To determine the pattern of biopsy proven renal disease (BPRD) from a tertiary care naval hospital in Karachi, Pakistan. Methods and Materials: All the renal biopsies in adult patients (≥18 years) performed at our hospital from 2008 to 2012 were retrospectively reviewed. The biopsies were evaluated by light microscopy and immunofluorescence. Results: A total 60 cases were analyzed. The mean age was 33.3±12.9 years (range: 18 to 72 years).The male to female ratio was 3:1. The most common indication of renal biopsy was nephrotic syndrome (43.3%), followed by renal failure (26.6%) and non-nephrotic proteinuria (23.3%). Primary glomerulonephritides (PGN) were predominant overall lesions, found in 46 (76.6%) of the total biopsies. Among PGN, the most common lesion was focal segmental glomerulosclerosis (FSGS), followed by membranous glomerulonephritis (MGN), IgA nephropathy (IgAN) and chronic sclerosing glomerulonephritis (CSGN) and a variety of rare lesions. Secondary glomerulonephritides (SGN) were found in only three (5%) cases. There were two cases of amyloidosis and one of lupus nephritis (LN). Tubulointerstitial disease (TID) and vascular disease were rare. Conclusion: This study provides information about the epidemiology of BPRD in a large tertiary care naval center in Southern Pakistan. PMID:25340152

  13. Password-only authenticated three-party key exchange proven secure against insider dictionary attacks.

    PubMed

    Nam, Junghyun; Choo, Kim-Kwang Raymond; Paik, Juryon; Won, Dongho

    2014-01-01

    While a number of protocols for password-only authenticated key exchange (PAKE) in the 3-party setting have been proposed, it still remains a challenging task to prove the security of a 3-party PAKE protocol against insider dictionary attacks. To the best of our knowledge, there is no 3-party PAKE protocol that carries a formal proof, or even definition, of security against insider dictionary attacks. In this paper, we present the first 3-party PAKE protocol proven secure against both online and offline dictionary attacks as well as insider and outsider dictionary attacks. Our construct can be viewed as a protocol compiler that transforms any 2-party PAKE protocol into a 3-party PAKE protocol with 2 additional rounds of communication. We also present a simple and intuitive approach of formally modelling dictionary attacks in the password-only 3-party setting, which significantly reduces the complexity of proving the security of 3-party PAKE protocols against dictionary attacks. In addition, we investigate the security of the well-known 3-party PAKE protocol, called GPAKE, due to Abdalla et al. (2005, 2006), and demonstrate that the security of GPAKE against online dictionary attacks depends heavily on the composition of its two building blocks, namely a 2-party PAKE protocol and a 3-party key distribution protocol. PMID:25309956

  14. Provenance study from petrography of the late Permian - Early Triassic sandstones of the Balfour Formation Karoo Supergroup, South Africa

    NASA Astrophysics Data System (ADS)

    Oghenekome, M. E.; Chatterjee, T. K.; Hammond, N. Q.; van Bever Donker, J. M.

    2016-02-01

    Non marine clastic sediments from the Late Permian - Early Triassic Balfour Formation of the Karoo Supergroup were studied to infer the composition, provenance and influence of weathering conditions. Petrographic studies based on quantitative analysis of the detrital minerals reveal that these sediments (mainly sandstones) are mostly composed of quartz, feldspar and sedimentary and metamorphic rock fragments. There is no significant petrographic variation across the sandstone succession of the study. The sandstones are dominantly feldspathic litharenite and ultralithofeldspathic in composition indicating a metamorphic source area. Modal analysis data plot in the dissected and transitional arc block provenance fields of QmFLt (quartz-feldspar-lithic fragments) diagram suggesting an active margin and magmatic arc signature preserving a recycled provenance.

  15. Above-Ground Dimensions and Acclimation Explain Variation in Drought Mortality of Scots Pine Seedlings from Various Provenances

    PubMed Central

    Seidel, Hannes; Menzel, Annette

    2016-01-01

    Seedling establishment is a critical part of the life cycle, thus seedling survival might be even more important for forest persistence under recent and future climate change. Scots pine forests have been disproportionally more affected by climate change triggered forest-dieback. Nevertheless, some Scots pine provenances might prove resilient to future drought events because of the species’ large distributional range, genetic diversity, and adaptation potential. However, there is a lack of knowledge on provenance-specific survival under severe drought events and on how acclimation alters survival rates in Scots pine seedlings. We therefore conducted two drought-induced mortality experiments with potted Scots pine seedlings in a greenhouse. In the first experiment, 760 three-year-old seedlings from 12 different provenances of the south-western distribution range were subjected to the same treatment followed by the mortality experiment in 2014. In the second experiment, we addressed the question of whether acclimation to re-occurring drought stress events and to elevated temperature might decrease mortality rates. Thus, 139 four-year-old seedlings from France, Germany, and Poland were subjected to different temperature regimes (2012–2014) and drought treatments (2013–2014) before the mortality experiment in 2015. Provenances clearly differed in their hazard of drought-induced mortality, which was only partly related to the climate of their origin. Drought acclimation decreased the hazard of drought-induced mortality. Above-ground dry weight and height were the main determinants for the hazard of mortality, i.e., heavier and taller seedlings were more prone to mortality. Consequently, Scots pine seedlings exhibit a considerable provenance-specific acclimation potential against drought mortality and the selection of suitable provenances might thus facilitate seedling establishment and the persistence of Scots pine forest. PMID:27458477

  16. Above-Ground Dimensions and Acclimation Explain Variation in Drought Mortality of Scots Pine Seedlings from Various Provenances.

    PubMed

    Seidel, Hannes; Menzel, Annette

    2016-01-01

    Seedling establishment is a critical part of the life cycle, thus seedling survival might be even more important for forest persistence under recent and future climate change. Scots pine forests have been disproportionally more affected by climate change triggered forest-dieback. Nevertheless, some Scots pine provenances might prove resilient to future drought events because of the species' large distributional range, genetic diversity, and adaptation potential. However, there is a lack of knowledge on provenance-specific survival under severe drought events and on how acclimation alters survival rates in Scots pine seedlings. We therefore conducted two drought-induced mortality experiments with potted Scots pine seedlings in a greenhouse. In the first experiment, 760 three-year-old seedlings from 12 different provenances of the south-western distribution range were subjected to the same treatment followed by the mortality experiment in 2014. In the second experiment, we addressed the question of whether acclimation to re-occurring drought stress events and to elevated temperature might decrease mortality rates. Thus, 139 four-year-old seedlings from France, Germany, and Poland were subjected to different temperature regimes (2012-2014) and drought treatments (2013-2014) before the mortality experiment in 2015. Provenances clearly differed in their hazard of drought-induced mortality, which was only partly related to the climate of their origin. Drought acclimation decreased the hazard of drought-induced mortality. Above-ground dry weight and height were the main determinants for the hazard of mortality, i.e., heavier and taller seedlings were more prone to mortality. Consequently, Scots pine seedlings exhibit a considerable provenance-specific acclimation potential against drought mortality and the selection of suitable provenances might thus facilitate seedling establishment and the persistence of Scots pine forest. PMID:27458477

  17. Responses of leaf nitrogen and mobile carbohydrates in different Quercus species/provenances to moderate climate changes.

    PubMed

    Li, M-H; Cherubini, P; Dobbertin, M; Arend, M; Xiao, W-F; Rigling, A

    2013-01-01

    Global warming and shortage of water have been evidenced in the recent past and are predicted for the future. Climate change will inevitably have considerable impact on plant physiology, growth, productivity and forest ecosystem functions. The present study determined the effects of simulated daytime air warming (+1 to 1.5 °C during the growing season), drought (-40% and -57% of mean precipitation of 728 mm during the 2007 and 2008 growing season, respectively) and their combination, on leaf nitrogen (N) and non-structural carbohydrates (NSC) of two Quercus species (Q. robur and Q. petraea) and provenances (two provenances for each species) grown in two soil types in Switzerland across two treatment years, to test the hypothesis that leaf N and NSC in the more water-sensitive species (Q. robur) and provenances (originating from water-rich locations) will more strongly respond to global warming and water deficit, compared to those in the more drought-tolerant species (Q. petraea) or provenances. No species- and provenance-specific responses in leaf N and NSC to the climate treatment were found, indicating that the results failed to support our hypothesis. The between-species variation of leaf N and NSC concentrations mainly reflected differences in biology of the two species, and the between-provenance variation of N and NSC concentrations apparently mirrored the climate of their origins. Hence, we conclude that (i) the two Quercus species studied are somewhat insensitive, due to their distribution covering a wide geographical and climate range, to moderate climate change within Switzerland, and (ii) a moderate global warming of B1 scenario (IPCC 2007) will not, or at least less, negatively affect the N and carbon physiology in Q. robur and Q. petraea.

  18. Above-Ground Dimensions and Acclimation Explain Variation in Drought Mortality of Scots Pine Seedlings from Various Provenances.

    PubMed

    Seidel, Hannes; Menzel, Annette

    2016-01-01

    Seedling establishment is a critical part of the life cycle, thus seedling survival might be even more important for forest persistence under recent and future climate change. Scots pine forests have been disproportionally more affected by climate change triggered forest-dieback. Nevertheless, some Scots pine provenances might prove resilient to future drought events because of the species' large distributional range, genetic diversity, and adaptation potential. However, there is a lack of knowledge on provenance-specific survival under severe drought events and on how acclimation alters survival rates in Scots pine seedlings. We therefore conducted two drought-induced mortality experiments with potted Scots pine seedlings in a greenhouse. In the first experiment, 760 three-year-old seedlings from 12 different provenances of the south-western distribution range were subjected to the same treatment followed by the mortality experiment in 2014. In the second experiment, we addressed the question of whether acclimation to re-occurring drought stress events and to elevated temperature might decrease mortality rates. Thus, 139 four-year-old seedlings from France, Germany, and Poland were subjected to different temperature regimes (2012-2014) and drought treatments (2013-2014) before the mortality experiment in 2015. Provenances clearly differed in their hazard of drought-induced mortality, which was only partly related to the climate of their origin. Drought acclimation decreased the hazard of drought-induced mortality. Above-ground dry weight and height were the main determinants for the hazard of mortality, i.e., heavier and taller seedlings were more prone to mortality. Consequently, Scots pine seedlings exhibit a considerable provenance-specific acclimation potential against drought mortality and the selection of suitable provenances might thus facilitate seedling establishment and the persistence of Scots pine forest.

  19. Tracing erosion patterns in Taiwan by quantitative provenance and geomorphological analysis

    NASA Astrophysics Data System (ADS)

    Resentini, Alberto; Goren, Liran; Castelltort, Sebastien; Garzanti, Eduardo

    2016-04-01

    Taiwan is one of the world's foremost natural laboratories for studies of orogenesis. After only a few Ma of ongoing collision between the Chinese continental margin and the Luzon Arc, the associated orogen has reached nearly 4 km in height and 100-150 km in width. High rates of convergence leading to rapid rock uplift combine with the wet stormy climate of the sub-tropical typhoon belt to deliver annually an average detrital mass of 9500 t/km2. The doubly-vergent thrust belt is composed of more than 85% of sedimentary rocks dominant in the pro-wedge, but metamorphic rocks as young as < 10 Ma are exposed in the retro-wedge, where zircon fission-track, apatite fission-track and (U-Th)/He ages are all reset and as young as 1 Ma or younger, indicating very recent fast exhumation. There is hardly another region where rock-uplift, unroofing and sediment production are of equal intensity. Quantitative analyses of tectonic and erosional processes around Taiwan have been carried out following diverse independent ways, including estimates of fluvial discharge of suspended solids, thermochronological techniques, cosmogenic measurements, and morphometry of river profiles (Dadson et al., 2003; Willett et al., 2003; Fox et al., 2014). Also the appearance and relative abundance of diagnostic rock fragments and other detrital minerals in Plio-Pleistocene sedimentary successions has been used to constrain unroofing rates, but a systematic description of compositional signatures of sediments shed by distinct tectonic domains has not been carried out so far. In this study we combine high-resolution petrographic and heavy-mineral analyses of modern sands carried by rivers all around Taiwan with their estimated sediment loads to calculate the detrital volumes generated from different lithologic assemblages within the orogen. River sediments are potent integrators of information that efficiently mediate provenance signals from different parts of the entire watershed, thus offering a

  20. Provenance of Palouse Loess and Relation to Late Pleistocene Glacial Outburst Flooding, Washington State

    NASA Astrophysics Data System (ADS)

    Sweeney, M. R.; Busacca, A. J.; Gaylord, D. R.; Zender, C. S.

    2002-12-01

    The eolian system of the Pacific Northwest is a product of long-term deflation of expansive sedimentary units by prevailing winds throughout the Quaternary. The Palouse loess is a deposit of wind-blown silt that covers approximately 10,000 sqare km up to 75 m thick. Late Quaternary units of the loess become finer texturally and thinner to the northeast, suggesting that they were derived from sedimentary basins south and west. The source of the loess has been inferred and hypothesized but never directly determined. A geochemical study of the late-Pleistocene to Holocene L1 unit of the Palouse loess and its possible sources was conducted to determine its provenance. There are two sedimentary units that lie upwind of the loess that may have contributed sediment via eolian deflation: 1) sand- and silt-rich slackwater sediment derived from late-Pleistocene outburst flooding of glacial Lake Missoula, and 2) sand- and silt-rich sediment from the Miocene-Pliocene Ringold Formation. Both are very similar in mineral composition, being derived from plutonic, metamorphic, and volcanic rocks of the western United States and southern British Columbia. Major and trace element data determined by x-ray fluorescence (XRF) of silt to very fine sand from loess and potential source sediments was used to pinpoint the exact source of the loess. A one-to-one relationship of major and trace elements exists between eolian and flood sediments, whereas Ringold Formation sediments have elevated Ti, P, Mg, and Ca oxides and lower K oxide values as well as scattered trace element values relative to Palouse loess. These trends may be due to the presence of basalt lithic grains in flood sediment that have been broken down and distributed throughout the loess. The Ringold Formation lacks appreciable amounts of basalt. The geochemical data from this study demonstrates that flood sediment is the dominant source of eolian material for the Palouse loess. The spatial distribution of the possible source

  1. Gulf coastal plain evolution in West Louisiana: Heavy mineral provenance and Pleistocene alluvial chronology

    NASA Astrophysics Data System (ADS)

    Mange, Maria A.; Otvos, Ervin G.

    2005-12-01

    High Resolution Heavy Mineral Analysis (HRHMA) of late Pleistocene terrace samples, their Tertiary source rocks, and modern river sediments provided an effective tool for reconstructing sediment provenance and mapping heavy mineral provinces in southwest Louisiana. Each province, linked to a discrete source region, represents Pleistocene fluvial channel belts within which depositional activity was controlled by periods of climate, sediment supply, and sea level changes. Four coastal heavy mineral provinces have been identified. The Northern Province (NP), drained by the lower reaches of the Sabine and Calcasieu Rivers underlies level mid- and late Pleistocene coastal terrace surfaces and is distinguished by high-grade metamorphic assemblages (kyanite, staurolite, sillimanite) and abundant zircon, probably of Ouachita Mts. derivation. Transporting eroded Cretaceous, Tertiary, and Pleistocene coastal plain deposits, the modern Calcasieu and Sabine River sands in west-central and southwest Louisiana and east Texas, display identical heavy mineral composition to that of the NP. Level Late Pleistocene coastal terrace areas in the east represent the Red River Province (RRP) with dominant epidote, tourmaline, garnet, and zircon. Its mineralogy is influenced significantly by Paleozoic-Mesozoic sedimentary units that frame the drainage basin upstream. Modern Red River sands differ in their spectra both from Red River Pleistocene coastal terrace and valley terrace deposits, interpreted by temporal fluctuations in sediment supply initiating a variable contribution of detritus from different sources. Tributaries that drain formations with high concentrations of high-grade metamorphic minerals also affected Red River valley Pleistocene terrace deposits in west-central Louisiana, enriching them in kyanite and staurolite. The Mississippi Province (MP) occupies the eastern-southeastern area of the low, flat, gently seaward-sloping Prairie coastal terrace. Whereas modern

  2. Flares in Biopsy-Proven Giant Cell Arteritis in Northern Italy

    PubMed Central

    Restuccia, Giovanna; Boiardi, Luigi; Cavazza, Alberto; Catanoso, Mariagrazia; Macchioni, Pierluigi; Muratore, Francesco; Cimino, Luca; Aldigeri, Raffaella; Crescentini, Filippo; Pipitone, Nicolò; Salvarani, Carlo

    2016-01-01

    Abstract This study evaluated the frequency, timing, and characteristics of flares in a large cohort of Italian patients with biopsy-proven giant cell arteritis (GCA) and to identify factors at diagnosis able to predict the occurrence of flares. We evaluated 157 patients with biopsy-proven transmural GCA diagnosed and followed at the Rheumatology Unit of Reggio Emilia Hospital (Italy) for whom sufficient information was available from the time of diagnosis until at least 4 years of follow-up. Fifty-seven patients (36.5%) experienced ≥1 flares. Fifty-one (46.4%) of the 110 total flares (88 relapses and 22 recurrences) were experienced during the first 2 years after diagnosis. The majority of relapses occurred with doses of prednisone ≤ 10 mg/day (82.9%), whereas only 3.4% of relapses occurred for doses ≥ 25 mg/day. Polymyalgia rheumatica (46.5%) and cranial symptoms (41.9%) were the most frequent manifestations at the time of the first relapse. Cumulative prednisone dose during the first year and total cumulative prednisone dose were significantly higher in flaring patients compared with those without flares (7.8 ± 2.4 vs 6.7 ± 2.4 g, P = 0.02; 15.5 ± 8.9 vs 10.0 ± 9.2 g, P = 0.0001, respectively). The total duration of prednisone treatment was longer in flaring patients (58 ± 44 vs 30 ± 30 months, P = 0.0001). Patients with disease flares had at diagnosis more frequently systemic manifestations (P = 0.02) and fever ≥ 38°C (P = 0.02), significantly lower hemoglobin levels (P = 0.05), more frequent presence at temporal artery biopsy (TAB) specimens of giant cells (P = 0.04) and intraluminal acute thrombosis (P = 0.007), and more moderate/severe arterial inflammation (P = 0.009) compared with those without flares. In the multivariate model fever ≥ 38 °C (hazard ratio 2.14; 95% confidence interval, 1.06–4.32, P = 0.03) and the severity of inflammatory infiltrate

  3. Characterization and provenance of the building stones from Pompeii's archaeological site (southern Italy)

    NASA Astrophysics Data System (ADS)

    Balassone, G.; Kastenmeier, P.; di Maio, G.; Mormone, A.; Joachimski, M.

    2009-04-01

    Pompeii is one of the most famous and complex areas of archaeological investigation in the world and with a uniquely favorable state of preservation. Even if many studies have been devoted in time to many archaeological aspects of this ancient city, large-scale and detailed studies aimed at characterizing mineralogy, petrography and isotope geochemistry of the building stones are still lacking. The scope of the present research is to fill this gap, pointing to the definition of the provenance of the stony materials used for ancient constructions of the city of Pompeii and to the possible trade routes. This work is part of a large-scale survey carried out by the Deutsches Archäologisches Institut of Berlin, with the purposes of reconstructing the sources of raw materials of various archaeological sites of the Sarno Plain (e.g. Longola-Poggiomarino settlement, Nuceria, Stabiae, etc.) and consequently also the paleo-environments of this area during the Olocene (Seiler, 2006, 2008; Kastemeier and Seiler, 2007). We sampled all the litotypes with different macroscopic characteristics from various buildings according to location, age (time span VI century B.C. - I century A.D.) and utilization; the architectural buildings considered for this study are mainly represented public and religious buildings, houses and funerary monuments. As possible source areas, representative litotypes have been sampled from ancient pits and outcrops surrounding Pompeii as well. A set of 80 samples have been sampled by means of micro-drillings for mineralogical, petrographic and geochemical analyses, comprising optical microscopy, X-ray diffraction, inductively coupled plasma mass, X-ray fluorescence and C-O isotope geochemistry. Minero-petrographic and XRD studies of Pompeii rock samples have shown that at least ten different litologies occur as building stones, belonging to basaltic to tephritic lavas, pyroclasts (tuffs, scoriae, etc.) and sedimentary rocks (limestone, travertines

  4. Isotope provenance of Eastern Himalayan rivers draining to the south into India, Nepal and Bhutan.

    NASA Astrophysics Data System (ADS)

    Gemignani, Lorenzo; Wijbrans, Jan; Najman, Yani; van der Beek, Peter

    2015-04-01

    The two syntaxis of the Himalaya (Eastern and western) are exhuming anomalously fast compared to the rest of Himalaya , and various hypothesis and models have been proposed to explain this, including coupled tectonic-erosion model of (Tectonic Aneurism)1-2 and ductile extrusion of weak lower crust from beneath Tibet by 'channel flow' 3 . The Namche Barwa metamorphic massif constitutes the eastern syntaxis of the belt and has experienced a complex history of uplift and deformation both influenced by intense fluvial erosion associated with the Yarlung-Tzangpo. Therefore, the Himalayas represent a unique natural laboratory where the interactions between the tectonics, erosion, climate and drainage evolution can be investigated. The purpose of the work is to understand in collaboration with other PhD students and European researchers collaborating in the iTECC Marie Curie Initial training Network the importance of processes involving the complex links and feedbacks between climate, tectonics and erosion. In this multi-disciplinary and multi-technique study the mains goals will be to assess the timing of rapid exhumation, to determine provenance source area exhumation of the syntaxis in relation to the big river capture event that has implicates the Yarlung-Tsangpo by the Brahmaputra, and the effect of the dilution of the syntaxis signal 's downstream. During the work the 40Ar/39Ar dating of single-grain detrital micas technique will be used to analyze smaller and younger grains using newly developed high sensitivity multi-collection noble gas mass spectrometry. Detrital zircon fission-track is perform to provides robust cooling age time of the sources terrains. Input from eastern syntaxis has been identified in the Brahmaputra sedimentary record by the appearance of very young grains (from 10 Ma to 6 Ma)4. To compare and to increase the previously collected data, fifteen samples from the Yarlung-Brahmaputra River system and from tributaries draining the Himalaya, the

  5. Prospective Evaluation of Serum β-Glucan Testing in Patients With Probable or Proven Fungal Diseases.

    PubMed

    Angebault, Cécile; Lanternier, Fanny; Dalle, Frédéric; Schrimpf, Cécile; Roupie, Anne-Laure; Dupuis, Aurélie; Agathine, Aurélie; Scemla, Anne; Paubelle, Etienne; Caillot, Denis; Neven, Bénédicte; Frange, Pierre; Suarez, Felipe; d'Enfert, Christophe; Lortholary, Olivier; Bougnoux, Marie-Elisabeth

    2016-09-01

    Background.  Early diagnosis and treatment are crucial in invasive fungal diseases (IFD). Serum (1-3)-β-d-glucan (BG) is believed to be an early IFD marker, but its diagnostic performance has been ambiguous, with insufficient data regarding sensitivity at the time of IFD diagnosis (TOD) and according to outcome. Whether its clinical utility is equivalent for all types of IFD remains unknown. Methods.  We included 143 patients with proven or probable IFD (49 invasive candidiasis, 45 invasive aspergillosis [IA], and 49 rare IFD) and analyzed serum BG (Fungitell) at TOD and during treatment. Results.  (1-3)-β-d-glucan was undetectable at TOD in 36% and 48% of patients with candidemia and IA, respectively; there was no correlation between negative BG results at TOD and patients' characteristics, localization of infection, or prior antifungal use. Nevertheless, patients with candidemia due to Candida albicans were more likely to test positive for BG at TOD (odds ratio = 25.4, P = .01) than patients infected with other Candida species. In 70% of the patients with a follow-up, BG negativation occurred in >1 month for candidemia and >3 months for IA. A slower BG decrease in patients with candidemia was associated with deep-seated localizations (P = .04). Thirty-nine percent of patients with rare IFD had undetectable BG at TOD; nonetheless, all patients with chronic subcutaneous IFD tested positive at TOD. Conclusions.  Undetectable serum BG does not rule out an early IFD, when the clinical suspicion is high. After IFD diagnostic, kinetics of serum BG are difficult to relate to clinical outcome. PMID:27419189

  6. Detrital zircon geochronology and provenance analysis applied to the onshore Makran accretionary wedge, SE Iran

    NASA Astrophysics Data System (ADS)

    Mohammadi, A.; Burg, J.; Winkler, W.; Ruh, J. B.; Von Quadt, A.

    2013-12-01

    The Makran is one of the largest accretionary wedges in the world, located in Southeast Iran. The Makran Basin is composed of turbidity sediments ranging in age from late Cretaceous to Holocene. The analysis of detrital zircons is important to interpret the provenance of the sediments and to clarify the geological history of the sedimentary basins and their surrounding source regions. We present about 2777 new U-Pb ages (ICP laser ablation mass spectrometry) from individual detrital zircons of 18 sandstone samples collected throughout the onshore Makran. 101 detrital zircon ages from a late Cretaceous fine grained sandstone ranges from 180-160 Ma (Mid-Jurassic). 478 detrital zircon ages obtained from the mid to late Eocene sandstone reveals different sources for the NE and NW parts of the Makran Basin. Zircon grains in the NE basin belong to two populations peaked at Mid-Jurassic and Mid-Eocene, with the noticeable absence of Cretaceous grains. In the NW basin, detrital zircons are Mid-Cretaceous to Mid-Eocene. 587 detrital zircon grains from fine to medium grained Oligocene sandstones collected in different parts of the basin range from Mid-Cretaceous to Mid-Eocene. 1611 detrital zircon age from Early Miocene sandstones collected in the eastern and western parts of the basin show distinctly different detrital zircon ages. They range from Mid-Cretaceous to Mid-Eocene in the eastern basin, from Late Cretaceous to Mid-Eocene in the west. Detrital zircon ages from Mid and Late Miocene sandstones rang from Late Cretaceous to Mid-Eocene. These new detrital zircon U-Pb age data show that the eastern and western parts of the Makran Basin received sediments from different source areas during Eocene and Early Miocene times. Mid and Late Miocene sediment are recycled (cannibalism) from the Oligocene units of the basin.

  7. Prospective Evaluation of Serum β-Glucan Testing in Patients With Probable or Proven Fungal Diseases

    PubMed Central

    Angebault, Cécile; Lanternier, Fanny; Dalle, Frédéric; Schrimpf, Cécile; Roupie, Anne-Laure; Dupuis, Aurélie; Agathine, Aurélie; Scemla, Anne; Paubelle, Etienne; Caillot, Denis; Neven, Bénédicte; Frange, Pierre; Suarez, Felipe; d'Enfert, Christophe; Lortholary, Olivier; Bougnoux, Marie-Elisabeth

    2016-01-01

    Background. Early diagnosis and treatment are crucial in invasive fungal diseases (IFD). Serum (1-3)-β-d-glucan (BG) is believed to be an early IFD marker, but its diagnostic performance has been ambiguous, with insufficient data regarding sensitivity at the time of IFD diagnosis (TOD) and according to outcome. Whether its clinical utility is equivalent for all types of IFD remains unknown. Methods. We included 143 patients with proven or probable IFD (49 invasive candidiasis, 45 invasive aspergillosis [IA], and 49 rare IFD) and analyzed serum BG (Fungitell) at TOD and during treatment. Results. (1-3)-β-d-glucan was undetectable at TOD in 36% and 48% of patients with candidemia and IA, respectively; there was no correlation between negative BG results at TOD and patients' characteristics, localization of infection, or prior antifungal use. Nevertheless, patients with candidemia due to Candida albicans were more likely to test positive for BG at TOD (odds ratio = 25.4, P = .01) than patients infected with other Candida species. In 70% of the patients with a follow-up, BG negativation occurred in >1 month for candidemia and >3 months for IA. A slower BG decrease in patients with candidemia was associated with deep-seated localizations (P = .04). Thirty-nine percent of patients with rare IFD had undetectable BG at TOD; nonetheless, all patients with chronic subcutaneous IFD tested positive at TOD. Conclusions. Undetectable serum BG does not rule out an early IFD, when the clinical suspicion is high. After IFD diagnostic, kinetics of serum BG are difficult to relate to clinical outcome. PMID:27419189

  8. Heavy-mineral analysis and provenance of Yellow River sediments around the China Loess Plateau

    NASA Astrophysics Data System (ADS)

    Pan, Baotian; Pang, Hongli; Gao, Hongshan; Garzanti, Eduardo; Zou, Yu; Liu, Xiaopeng; Li, Fuqiang; Jia, Yunxia

    2016-09-01

    In its upper-middle reaches the Yellow River has high sand contents after traversing through large areas of desert and the China Loess Plateau. Understanding riverbed sediment composition in the channel is critical for the interpretation of the potential provenance, aeolian sand transport and the linkage between the Loess Plateau and the Yellow River. To address these issues, we collected 52 samples from the modern riverbed, proximal deserts, and major tributaries and used analyses of grain size, grain morphology, and heavy-mineral compositions, to establish the spatial distribution and characteristics of source regions and riverbed sediments. The heavy-mineral assemblages demonstrate significant variations for the different sections of the Yellow River. The riverbed samples from the upper reach are dominated by opaque minerals (limonite and magnetite), amphibole and epidote, with minor zircon, tourmaline and rutile. Riverbed sediments from the middle reach are garnet-rich, reflecting the widespread distribution of Mesozoic sandstones. This variability closely reflects the source regions. Our data show that seasonal tributaries (the "Ten Great Gullies") carrying detritus from the Ordos Plateau may account for the localized high garnet concentrations in the Inner Mongolia section of the upper reach. Scanning electron microscope (SEM) imaging of quartz grains show that the river sediments are characterized by composite microtextures acquired in both fluvial and eolian environments of the Hedong, Ulan Buh and Kubuq Deserts. The mineralogical composition in the upper reach (Lanzhou-Yinchuan) is similar to that of sediments in the Loess Plateau and Northeast Tibet Plateau (Western Lanzhou). However, the composition differs markedly from that in the Inner Mongolia section of the upper and middle reaches. This variation indicates that in the upper reach the Northeast Tibet Plateau contributes significant volumes of sediment to the Yellow River and Loess Plateau, but

  9. Provenance discrimination in surface sediments of the Amerasian Basin (Arctic Ocean) constrained by quantitative mineralogical analyses

    NASA Astrophysics Data System (ADS)

    Bazhenova, E.; Zou, H.; Vogt, C.; Stein, R.; Matthiessen, J.

    2012-04-01

    This study focuses on the determination of potential source areas for the terrigenous material derived from Eurasia and North America to reconstruct the sedimentary environments in the Amerasian Basin of the Arctic Ocean. When compared to the potential source areas in the Arctic Ocean hinterland, spatial variations in bulk mineralogy of surface sediments may provide important information on the trajectories of sea-ice drift and oceanic currents. Investigations are carried out on surface samples recovered from the Mendeleev Ridge and shelves of the East Siberian and the Chukchi seas. Mineralogical analysis was performed on bulk sediments by the X-ray diffraction (XRD) method. Dry powder samples were mixed together with corundum for further quantification of mineral contents. Raw XRD data were processed using the RockJock (Eberl, 2003) and QUAX (Emmermann & Lauterjung, 1990; Vogt, 1997) software to test the consistency of both methods. Additionally, composition of artificial mixtures was determined to test the accuracy of mineral standards. Obtained results are used to identify mineralogical provinces in the surface sediments of the Amerasian Basin. This geographical distribution is also compared to the previously published studies, including the numerous research activities carried out in the Siberian shelf seas in the middle of the 20th century. Bulk mineral composition of surface sediments will be further used for unmixing of the downcore mineralogical records for sediment cores recovered along two transects across the Mendeleev Ridge during the ARK-XXIII/3 Expedition of RV "Polarstern" (for details see Stein et al., 2010). Trends in mineralogical composition will be also compared to the grain-size distribution in order to attribute the provenance changes to different transportation mechanisms in variable sedimentary environments.

  10. PON-1 Activity and Plasma 8-Isoprostane Concentration in Patients with Angiographically Proven Coronary Artery Disease

    PubMed Central

    Kuchta, Agnieszka; Strzelecki, Adrian; Ćwiklińska, Agnieszka; Totoń, Magdalena; Gruchała, Marcin; Zdrojewski, Zbigniew; Kortas-Stempak, Barbara; Gliwińska, Anna; Dąbkowski, Kamil; Jankowski, Maciej

    2016-01-01

    The aim of the study was to estimate association of the extent of angiographically proven coronary artery disease (CAD) with plasma 8-isoprostane F2 (8-iso-PGF2α) levels as a reliable marker of lipid peroxidation and serum activity of paraoxonase-1, which demonstrates the ability to protect against lipid oxidation. The study included 105 patients with angiographically documented CAD (CAD+) and 45 patients with negative results of coronary angiography (CAD−). Compared to the control group CAD+ patients were characterized by increased 8-iso-PGF2α levels (P = 0.007) and reduced activity of PON-1 towards paraoxon (PONase, P = 0.002) and phenyl acetate (AREase, P = 0.037). Univariate correlation analysis indicated that 8-iso-PGF2α concentrations were positively associated with the severity of CAD as evaluated by the Gensini score (R = 0.41, P < 0.001) while PONase activity (R = −0.26, P < 0.05) and AREase activity (R = −0.23, P < 0.05) were inversely correlated with CAD severity. PONase activity and 8-iso-PGF2α concentration remained independent determinant of atherosclerosis severity in multiple linear regression after adjusting for age, gender, smoking habits, hypertension, type 2 diabetes, statin therapy, and HDL-C and TAG concentration (β coefficients −0.267; P < 0.05 and 0.368; P < 0.001, resp.). The results suggest that PON-1 activity and 8-iso-PGF2α concentration are associated with the presence and extent of coronary stenosis and may be considered additional markers of coronary artery disease. PMID:26697134

  11. Provenance, Paleoaltimetry, and Tectonic Significance of the Liuqu Conglomerate, Southern Tibet

    NASA Astrophysics Data System (ADS)

    Leary, R.; DeCelles, P. G.; Quade, J.

    2012-12-01

    The mid-Cenozoic Liuqu Conglomerate was deposited in alluvial fan and coarse-grained fluvial deposystems along the Indus-Yarlung suture zone and provides information critical for constraining the timing and nature of the India-Asia collision. The Liuqu basins formed between ophiolitic mélanges (to the south) and uplifted Cretaceous forearc deposits (to the north) along the central, 1000 km long segment of the Indus-Yarlung suture zone in southern Tibet. Sedimentological analysis shows the unit to be composed of mixed sediment-gravity flow and fluvial lithofacies assemblages, locally punctuated by mature paleosols of mainly vertic character. Paleocurrent and provenance data demonstrate predominantly northward sediment transport from source terranes in ophiolitic and oceanic rocks in the hanging wall of a north-vergent thrust system that forms the southern limit of most Liuqu outcrops. Detrital zircon U-Pb age spectra define age clusters of 80-110 Ma, 120-135 Ma, 500-600 Ma, and 1100-1200 Ma, requiring input from both Asian and Indian sources. The youngest detrital zircon U-Pb ages obtained thus far are ca. 32 Ma, providing a maximum depositional age. Analysis of paleosol carbonates yielded δ13C values between -12‰ and -8‰ which indicate deposition in a well vegetated setting; this is consistent with the intensely weathered paleosols preserved in this unit. Together these initial results indicate that (a) the India-Asia collision was well underway by the time of Liuqu deposition (no later than 32 Ma); (b) deposition occurred under paleogeographic and/or paleoclimatic conditions that promoted intense weathering on Liuqu floodplains and alluvial fan margins. The latter is significant insofar as intense weathering would be surprising at high paleoelevations predicted by the development of the Tethyan Himalayan thrust belt beginning in Eocene time.

  12. Geochemistry of archean shales from the Witwatersrand Supergroup, South Africa: source-area weathering and provenance

    SciTech Connect

    Wronkiewicz, D.J.; Condie, K.C.

    1987-09-01

    With a few exceptions, shales from the Archean Witwatersrand Supergroup in South Africa are depleted in Na, Ca, Large ion lithophile elements (LILE, rare earth elements (REE) and half field strength elements ((HFSE) compared to Phanerozoic shales. Cr, Co and Ni are enriched in all Witwatersrand shales and Fe and Mg are high in shales from the West Rand Groups (WRG) and lower Central Rand Group (CRG). Shales from the CRG and uppermost WRG are enriched in Na, Al, LILE, REE, HFSE and transition metals relative to shales from the lower WRG. Chondrite-normalized REE patterns for all Witwatersrand shales are enriched in light-REE and exhibit small to moderate negative Eu anomalies. Relative to shales from the CRG, shales from the WRG exhibit depletions of Na, Ca and Sr, a feature probably reflecting intense chemical weathering of their source rocks. CIA indices in Witwatersrand shales are variable, even within the same shale unit. Such variations reflect chiefly variable climatic zones or rates of tectonic uplift in source areas with perhaps some contribution from provenance and element remobilization during metamorphism. Compared to present-day upper continental crust, all but the Orange Grove, Roodepoort, and K8 shales appear to have been derived from continental sources depleted in LILE, REE, and HFSE and enriched in transition metals. Computer mixing models abased on six relatively immobile elements (Th, Hf, Yb, La, Sc, Co) and four source rocks indicate that the relative proportions of granite, basalt and komatiite increased with time in sediment source areas at the expense of tonalite.

  13. Geochemical variability induced by entrainment sorting: quantified signals for provenance analysis

    NASA Astrophysics Data System (ADS)

    Garcia, Daniel; Ravenne, Christian; Maréchal, Benoît; Moutte, Jacques

    2004-10-01

    A substantial part of the mineralogical and chemical heterogeneity of clay-poor sands, at the bed scale, results from tractive redistribution of the grains in the bedload. Since coarse and light particles are more easily entrained than denser and smaller heavy minerals, the latter commonly concentrate in grain scale lags, that alternate with sand depleted in these minerals. When sampled and analysed at the centimetre scale, this primary heterogeneity translates into nice geochemical covariations between the minor/trace elements that concentrate in some heavy minerals (Zr, Ti, P, Cr, V, Y, Ce among others). Regressing these variations allow us to derive two chemical fingerprints of the sand: one records the proportions between some heavy minerals, the other the average composition of framework grains, i.e., a sand composition corrected from the contribution of heavy minerals. Both relate to provenance and allow different sand beds to be compared in appropriate spider diagrams. The construction of these diagrams, their potential use and their limitations are discussed using two contrasting examples. Continental channel sandstones from the Ravenscar Group (middle Jurassic, Yorkshire, UK) illustrate how these geochemical fingerprints vary from the local to the Group scales and how robust they are against diagenetic overprint. At Ravenscar, the Zr vs. Ti, V, Cr covariations record the presence of Ti oxides and magnetite together with zircon and of volcanic lithoclasts at the deposition stage, despite a high degree of diagenetic alteration. Overbank sandstones (lateral to channels) from the deep marine Grès d'Annot Formation (Eocene-Oligocene, Alps) illustrates how apatite and monazite delivered by a dominantly granitic source generate covariations between Zr and P, Y, Ce and Th contents with characteristically steep slopes.

  14. Provenance of geogenic arsenic in the Goose River basin, Maine, USA

    NASA Astrophysics Data System (ADS)

    Sidle, W.; Wotten, B.; Murphy, E.

    2001-11-01

    Occurrences of arsenic (As) are sporadic in drinking water from many wells in mid-coastal Maine. This is particularly the case where water supplies are pumped from fractured igneous and metamorphic bedrock. Although health risk-based As contamination levels are lowered, it is likely that the provenance of trace As concentrations will need to be scrutinized. Approximately 33% of wells sampled in the Goose River ground-watershed had at least one occurrence of 10 µg l-1 As. Geologic mapping in combination with the rock petrology and mineral chemistry were important in deciphering probable local source areas for arsenic. Median whole rock As is greater than 39 mg kg-1 in the Bucksport Formation and anatectic granitoids of the Waldoboro Pluton Complex. 34S isotopic composition of arsenian pyrites indicate that local areas of anomalous arsenic-bearing, transported soils are not the source of trace As in groundwater, but, instead, the As is derived from oxidation processes in the fractured bedrock along the western margin of the ground-watershed. In groundwater, the As3+/As5+ ratios ranged from 0.01 to 4.45 and were inconsistent spatially and temporally. Although it is probable that the stability field in most groundwater supplies is HAsO4 2-, arsenic speciation is not necessarily an aid to predicting transport. Instead an isotopic evaluation of associated groundwater SO4 2- clearly indicates a consistent correlation of elevated As with enriched δ34SSO4. The δ34SSO4 ranges of +4.05 to +4.61‰ may be characteristic of local oxidation in the fractured groundwater flow systems. Potential areas of geogenic As transport may be predictable.

  15. Renal Involvement in Non-Hodgkin Lymphoma: Proven by Renal Biopsy

    PubMed Central

    Li, Shi-Jun; Chen, Hui-Ping; Chen, Ying-Hua; Zhang, Li-hua; Tu, Yuan-Mao; Liu, Zhi-hong

    2014-01-01

    Aims To determine the spectrum of renal lesions in patients with kidney involvement in non-Hodgkin's lymphoma (NHL) by renal biopsy. Methods The clinical features and histological findings at the time of the renal biopsy were assessed for each patient. Results We identified 20 patients with NHL and renal involvement, and the diagnosis of NHL was established following the kidney biopsy in 18 (90%) patients. The types of NHL include the following: chronic lymphocytic leukemia/small lymphocytic lymphoma (n = 8), diffuse large B-cell lymphoma (n = 4), T/NK cell lymphoma (n = 3), lymphoplasmacytic lymphoma (n = 2), cutaneous T-cell lymphoma (n = 1), mucosa-associated lymphoid tissue lymphoma (n = 1) and mantle cell lymphoma (n = 1). All presented with proteinuria, and 15 patients had impaired renal function. The pathological findings included (1) membranoproliferative glomerulonephritis-like pattern in seven patients; (2) crescent glomerulonephritis in four; (3) minimal-change disease in three, and glomeruli without specific pathological abnormalities in three; (4) intraglomerular large B-cell lymphoma in one; (5) intracapillary monoclonal IgM deposits in one; (6) primary diffuse large B-cell lymphoma of the kidneys in one; and (7) lymphoma infiltration of the kidney in eight patients. Conclusion A wide spectrum of renal lesions can be observed in patients with NHL, and NHL may be first proven by renal biopsies for evaluation of kidney injury or proteinuria. Renal biopsy is necessary to establish the underlying cause of renal involvement in NHL. PMID:24733356

  16. Provenance and paleoweathering reconstruction of the Mesoproterozoic Hongshuizhuang Formation (1.4 Ga), northern North China

    NASA Astrophysics Data System (ADS)

    Luo, Qingyong; Zhong, Ningning; Wang, Yannian; Ma, Ling; Li, Min

    2015-10-01

    This is the first study presenting major and trace elemental data from the Mesoproterozoic Hongshuizhuang Formation shales in Yanshan basin, North China, in order to reconstruct its provenance and chemical weathering history. The shales are strongly depleted in Na2O and Sr and enriched in Y and transition metal elements relative to upper continental crust. Low Zr concentrations and various discriminant plots (e.g., Th/Sc-Zr/Sc and Al2O3-TiO2-Zr) indicate insignificant mineral sorting or recycling of these shales. The rocks show light rare earth element (REE) enrichment (La/YbCN = 3.99-6.92), flat heavy REE, and significantly negative Eu anomalies (Euan = 0.57-0.68) in chondrite-normalized REE patterns, similar to post-Archean Australian average shales. The fairly uniform REE patterns and trace element ratios indicate that the Hongshuizhuang Formation shales were derived from a felsic source area with granodiorite as the dominant contributor. Mixing calculations suggest a mixture of 30 % granite porphyry, 5 % basalt, and 65 % granodiorite as the possible source of the shales, also supporting that granodiorite was the predominant source. Intense chemical weathering of the source terrain is indicated by high values of the premetasomatized chemical index of alteration, plagioclase index of alteration, Rb/Sr, a strong positive correlation between TiO2 and Al2O3, depletion of CaO, Na2O, and Sr, and mineral compositions. Such strong chemical weathering suggests a warm and wet paleoclimate, perhaps due to high atmospheric CO2 and CH4 concentrations, and a near-equatorial location of the North China Craton in the Columbia supercontinent at 1.4 Ga.

  17. Sand Provenance Within the Waipaoa River System, North Island, New Zealand

    NASA Astrophysics Data System (ADS)

    James, D.; Marsaglia, K. M.

    2002-12-01

    As a result of oblique subduction, forearc sedimentary sequences along the eastern margin of North Island, New Zealand have been deformed and uplifted and are currently being eroded and recycled into younger deposits. In this region, the Waipaoa River System is primarily developed on Tertiary forearc sedimentary sequences, and to a lesser extent on tectonized Cretaceous sedimentary units in the headwaters. This river system provides an excellent opportunity to model the production and fate of sand in an actively deforming forearc basin. The headwaters of the Waipaoa River are known areas of active gully erosion, considered by previous workers as the major influence on sediment input and flux through the Waipaoa system. This gully erosion has been linked to tectonic (brittle deformation of source rocks), anthropogenic (deforestation), and climatic (Cyclone Bola) effects. Whereas previous studies have emphasized the mud and gravel sediment fractions, our study focuses on the sand fraction, its provenance and downstream compositional trends. Approximately 70 stream-sediment and source-rock samples were collected from the modern drainage basin. Their locations were evenly distributed from the headwaters to the mouth of the Waipaoa River in Poverty Bay, covering approximately 60 km. Preliminary petrographic analysis of the sand-size fractions indicates a dominance of sedimentary lithic fragments throughout the system. Observed downstream increases in grain rounding and in the proportion of monomineralic grains (quartz and feldspar) are likely responses to increased transport distance and preferential abrasion and disaggregation of softer lithic fragments. More detailed examination of the sedimentary lithic fraction should help discriminate the relative importance of Cretaceous and Tertiary source terrains.

  18. Characteristics and provenance of dustfall during an unusual floating dust event

    NASA Astrophysics Data System (ADS)

    Lue, Y. L.; Liu, L. Y.; Hu, X.; Wang, L.; Guo, L. L.; Gao, S. Y.; Zhang, X. X.; Tang, Y.; Qu, Z. Q.; Cao, H. W.; Jia, Z. J.; Xu, H. Y.; Yang, Y. Y.

    2010-09-01

    This study aims to investigate the characteristics, provenance, and particle-related pollution of an intense dustfall event that occurred in Beijing on 16-17 April 2006. Satellite images reveal that the aeolian dust originated in northeastern Alxa League of Inner Mongolia and passed southeastward across northern Ningxia, middle Inner Mongolia, northern Shaanxi, Shanxi, and Hebei provinces. The dust then moved out of continental China in the vicinity of Beijing and Tianjin. The floating dust led to severe air pollution in Huhhot, Datong, and Beijing. We measured dustfall by collecting dust samples, investigated particle morphology, and calculated the mass medium diameter (MMD) of the dustfall using a scanning electron microscope (SEM). Major elements and mineral content of the dust particles were determined by electron probe and powder X-ray diffractometer, respectively. The relative abundance of dustfall during this event was 12.5-15.0 g m -2, making up about 10% of the total annual dustfall in Beijing. Dustfall amounted to 205 thousand tons in Beijing, the largest amount observed in recent years. The dust particles were mostly angular, subangular and subrounded in morphology, and the MMD was nearly 12 μm. Particles <10 μm accounted for 54.7% by number, but fine sand particles (larger than 50 μm) made up 53.7% by volume. Particles with diameters larger than 20 μm made up of the predominant volume of the samples (90.35%). Hence, this dustfall event was characterized by a high content of fine sand and coarse silt particles. The principal elements in the dust particles were C, O, Si, Al, Fe, and Ca, whereas the major minerals were quartz, Na-feldspar, calcite, and clay minerals.

  19. Towards a Standard for Provenance and Context for Preservation of Data for Earth System Science

    NASA Technical Reports Server (NTRS)

    Ramaprian, Hampapuram K.; Moses, John F.

    2011-01-01

    Long-term data sets with data from many missions are needed to study trends and validate model results that are typical in Earth System Science research. Data and derived products originate from multiple missions (spaceborne, airborne and/or in situ) and from multiple organizations. During the missions as well as well past their termination, it is essential to preserve the data and products to support future studies. Key aspects of preservation are: preserving bits and ensuring data are uncorrupted, preserving understandability with appropriate documentation, and preserving reproducibility of science with appropriate documentation and other artifacts. Computer technology provides adequate standards to ensure that, with proper engineering, bits are preserved as hardware evolves. However, to ensure understandability and reproducibility, it is essential to plan ahead to preserve all the relevant data and information. There are currently no standards to identify the content that needs to be preserved, leading to non-uniformity in content and users not being sure of whether preserved content is comprehensive. Each project, program or agency can specify the items to be preserved as a part of its data management requirements. However, broader community consensus that cuts across organizational or national boundaries would be needed to ensure comprehensiveness, uniformity and long-term utility of archived data. The Federation of Earth Science Information Partners (ESIP), a diverse network of scientists, data stewards and technology developers, has a forum for ESIP members to collaborate on data preservation issues. During early 2011, members discussed the importance of developing a Provenance and Context Content Standard (PCCS) and developed an initial list of content items. This list is based on the outcome of a NASA and NOAA meeting held in 1998 under the auspices of the USGCRP, documentation requirements from NOAA and our experience with some of the NASA Earth science

  20. Rolling Deck to Repository II: Getting Control of Provenance and Quality

    NASA Astrophysics Data System (ADS)

    Miller, S. P.; Arko, R.; Chandler, C. L.; Clark, P. D.; Neiswender, C.

    2008-12-01

    Data are now being re-used by a far wider circle of researchers and students than ever before, across a broader range of disciplines. Before, during, and after a field program, the exchange and merging of information is a dynamic, iterative and sometimes anonymous process that may occur years, or decades, after the data were initially acquired. Collaborative steps are currently being taken toward a prototype data discovery system that can be extended to the entire NSF-supported academic research fleet, including both large and small operations. With emerging shipboard Internet capabilities, near real-time transport of selected data from the rolling deck to a repository can become a reality. Much of the effort is being devoted to data preservation and access, to the identification of standard products, and to the generation of appropriate metadata, with a streamlined methodology that can be adopted by a wide range of vessel operating institutions. Beyond the challenge of just finding data, currently researchers and students struggle repeatedly to make sense of downloaded data objects. Across institutions there are wide variations in quality control procedures, most commonly none, and virtually no external communication of the history of transformations applied to a data set. For example, the status of corrections for sound velocity or roll-bias, or beampoint editing for multibeam swath seafloor mapping sonar systems are often challenging to experts and baffling to users from other disciplines. With greater re-use of data comes the greater likelihood of interpretation of artifacts as features. Tracking data provenance and quality is a problem today, and the situation will become more critical as data are more widely and rapidly disseminated. We will identify quality control criteria for standard shipboard data products, and existing tools for quality assessment with automation potential (or lack thereof). We invite discussion of an XML institutional quality

  1. The chemical information ontology: provenance and disambiguation for chemical data on the biological semantic web.

    PubMed

    Hastings, Janna; Chepelev, Leonid; Willighagen, Egon; Adams, Nico; Steinbeck, Christoph; Dumontier, Michel

    2011-01-01

    Cheminformatics is the application of informatics techniques to solve chemical problems in silico. There are many areas in biology where cheminformatics plays an important role in computational research, including metabolism, proteomics, and systems biology. One critical aspect in the application of cheminformatics in these fields is the accurate exchange of data, which is increasingly accomplished through the use of ontologies. Ontologies are formal representations of objects and their properties using a logic-based ontology language. Many such ontologies are currently being developed to represent objects across all the domains of science. Ontologies enable the definition, classification, and support for querying objects in a particular domain, enabling intelligent computer applications to be built which support the work of scientists both within the domain of interest and across interrelated neighbouring domains. Modern chemical research relies on computational techniques to filter and organise data to maximise research productivity. The objects which are manipulated in these algorithms and procedures, as well as the algorithms and procedures themselves, enjoy a kind of virtual life within computers. We will call these information entities. Here, we describe our work in developing an ontology of chemical information entities, with a primary focus on data-driven research and the integration of calculated properties (descriptors) of chemical entities within a semantic web context. Our ontology distinguishes algorithmic, or procedural information from declarative, or factual information, and renders of particular importance the annotation of provenance to calculated data. The Chemical Information Ontology is being developed as an open collaborative project. More details, together with a downloadable OWL file, are available at http://code.google.com/p/semanticchemistry/ (license: CC-BY-SA).

  2. Composition and provenance of the Puente Formation (Miocene), Los Angeles Basin

    SciTech Connect

    Critelli, S. ); Rumelhart, P.E.; Ingersoll, R.V. )

    1994-04-01

    The Puente Formation (PFm) is a middle to upper Miocene clastic unit lying unconformably on the middle to lower Miocene El Modeno Volcanics and Topanga Group, within the Los Angeles basin (LAB). The PFm, about 3900m thick, is composed of sandstone, conglomerate, and mudrock deposited on a submarine fan at bathyal depths. Several intrabasinal discordances suggest active tectonics during deposition. The succession consists of two main upward thickening and coarsening megacycles reflecting submarine fan progradation. The PFm is characterized up-section by: (1) thin-bedded fine sandstone and shale (La Vida M.) grading to thick-bedded coarse sandstone an conglomerate (soquel M.); (2) thin-bedded siltstone, mudrock and sandstone (Yorba M.) grading to thick- to very thick-bedded coarse-grained sandstone and conglomerate (Sycamore Canyon M.). Sandstones of the PFm are quartzofeldspathic and suggest a probable local provenance from the plutonic, volcanic, and metamorphic rocks of the San Gabriel Mountains. Petrological parameters, however, suggest variable contribution of these source rock units through time. Coarse-grained plutonic rock fragments are abundant for the entire succession and consist of plagioclase-rich plutonic rocks perhaps sourced from the Lowe granodiorite. Microlitic, lathwork to felsitic volcanic lithic grains are also present in the lower and middle part. In the Yorba M. there is a local increase of volcanic detritus (Lv/L - 0.80), represented by larger volcanic lithics and abundant volcaniclastic matrix. Metamorphic detritus is not very abundant; it is concentrated in the La Vida M. the PFm represents sedimentation during tectonically active time in the evolution of southern California.

  3. Resolving Paragneiss Provenance at Grollier Lake in the Athabasca Granulite Terrane, Western Canadian Shield

    NASA Astrophysics Data System (ADS)

    Ply, Dustin

    U-Pb crystallization ages of metamorphic and detrital zircons from all three paragneiss samples fall into the range of ca. 1.85-2.59 Ga, excluding two much older grains. Evidence suggests that the paragneiss of Grollier Lake record deformation exclusively from the Taltson and Trans-Hudson orogenies. It is apparent from geochronological data that the Taltson orogeny played an exceedingly larger role in the deformation of these rocks than the Trans-Hudson. Deposition of the paragneiss protoliths most likely culminated between ca. 2037-1994 Ma with metamorphism ceasing by 1852.1 +/- 11.1 Ma. The oldest overgrowth considered to be concordant is 1994 +/- 12 Ma and interpreted to represent the first signature of burial facilitated by the Taltson orogeny. U-Pb crystallization ages ranging from ca. 1872-1900 Ma can be attributed to metamorphisms from both the late Taltson or early Trans-Hudson orogenies given that the transition between these events is hard to delineate. Zircons dated > ca. 2.04 Ga are detrital in origin with U-Pb crystallization ages for these grains possibly being discordant as supported by the concordia diagrams. However, these ages can still be explained by provenance from sources such as the ca. 2.17-2.13 Ga Rutledge River basin to the west of Grollier Lake, and the ca. 2.3 Ga Arrowsmith subduction-related plutons north of Lake Athabasca. Older zircons (2955.6 +/- 10.7 Ma and 3078 +/- 13.9 Ma) in the migmatitic paragneiss are inferred to be inherited from Neoarchean and early Paleoproterozoic crust below. It is possible that rocks of the lower structural levels will record deformation from the Arrowsmith orogeny.

  4. The Circum-Rhodope Belt, northern Greece: Age, provenance, and tectonic setting

    NASA Astrophysics Data System (ADS)

    Meinhold, Guido; Kostopoulos, Dimitrios K.

    2013-06-01

    The Circum-Rhodope Belt (CRB) sensu stricto comprises low-grade metamorphosed Triassic and Jurassic sedimentary rocks fringing the high-grade metamorphic rocks of the Serbo-Macedonian and Rhodope massifs in northern Greece. Main outcrops occur in the easternmost part of the Vardar suture zone in the Chalkidiki peninsula (Melissochori Formation; formerly Svoula flysch) and in Thrace (Makri unit and Melia Formation). The tectonostratigraphic relationship between the CRB and the high-grade metamorphics has been the subject of long discussions. Older interpretations maintain that the CRB represents the original Mesozoic stratigraphic cover of the Serbo-Macedonian crystalline basement, whereas later revisions propose the existence of two distinct greenschist-facies Mesozoic metasedimentary units: an eastern unit related to the development of a Jurassic black shale basin north of the Rhodope, and a western unit related to the development of an olistostromic flysch in the Cretaceous. Here we present a critical re-evaluation of the CRB with regard to its age, provenance, and tectonic setting based on novel geochemical and isotopic data. The Makri unit and the Melissochori Formation belong to the CRB proper and were deposited in proximity to Carboniferous-Early Permian igneous basement rocks (Pelagonia / Strandja / Thracia Terrane) in latest Triassic and Jurassic times, as shown by a prominent detrital zircon age population of 350-290 Ma. By contrast, the Melia Formation is unrelated to the CRB and was deposited in a foreland basin in front of a metamorphic nappe pile with Rhodopean affinities in the early Cretaceous, as shown by a prominent detrital zircon age population of 315-285 Ma and xenocrysts of ~ 550 Ma and ~ 450 Ma. Thus, the commonly accepted CRB concepts have to be revisited. All units have been tectonically juxtaposed to their present location during Balkan and Alpine orogenic processes.

  5. Lower Cretaceous Xigaze ophiolites formed in the Gangdese forearc: Evidence from paleomagnetism, sediment provenance, and stratigraphy

    NASA Astrophysics Data System (ADS)

    Huang, Wentao; van Hinsbergen, Douwe J. J.; Maffione, Marco; Orme, Devon A.; Dupont-Nivet, Guillaume; Guilmette, Carl; Ding, Lin; Guo, Zhaojie; Kapp, Paul

    2015-04-01

    The India-Asia suture zone of southern Tibet exposes Lower Cretaceous Xigaze ophiolites and radiolarian cherts, and time-equivalent Asian-derived clastic forearc sedimentary rocks (Xigaze Group). These ophiolites have been interpreted to have formed in the forearc of the north-dipping subduction zone below Tibet that produced the Gangdese magmatic arc around 15-20°N, or in the forearc of a sub-equatorial intra-oceanic subduction zone. To better constrain the latitude of the ophiolites, we carried out an integrated paleomagnetic, geochronologic and stratigraphical study on epi-ophiolitic radiolarites (Chongdui and Bainang sections), and Xigaze Group turbiditic sandstones unconformably overlying the ophiolite's mantle units (Sangsang section). Detrital zircon U-Pb geochronology of tuffaceous layers from the Chongdui section and sandstones of the Xigaze Group at the Sangsang section provides maximum depositional ages of 116.5 ± 3.1 Ma and 128.8 ± 3.4 Ma, respectively, for the Chongdui section and an Asian provenance signature for the Xigaze Group. Paleomagnetic analyses, integrated with rock magnetic experiments, indicate significant compaction-related inclination 'shallowing' of the remanence within the studied rocks. Two independent methods are applied for the inclination shallowing correction of the paleomagnetic directions from the Sangsang section, yielding consistent mean paleolatitudes of 16.2°N [13°N, 20.9°N] and 16.8°N [11.1°N, 23.3°N], respectively. These results are indistinguishable from recent paleolatitude estimates for the Gangdese arc in southern Tibet. Radiolarites from the Chongdui and Bainang sections yield low paleomagnetic inclinations that would suggest a sub-equatorial paleolatitude, but the distribution of the paleomagnetic directions in these rocks strongly suggests a low inclination bias by compaction. Our data indicate that spreading of the Xigaze ophiolite occurred in the Gangdese forearc, and formed the basement of the forearc

  6. Oil and gas basins of the Pacific margin of the Soviet Union: Proven and probable

    SciTech Connect

    Khain, V.E.; Burlin, Yu.K. )

    1990-05-01

    The Pacific margin of the Soviet Union comprises a large number of sedimentary basins, many of rather small size, but some more extensive, of which five contain already proven hydrocarbon reserves: Sakhalin, Tartar Strait, West Kamchatka, Khatyrka, and Anadyr. The intensely folded and partly metamorphosed basement of the sedimentary basins of the region consists of Paleozoic and Mesozoic rocks, accreted in the late Mesozoic and Paleogene to the ancient, Precambrian continental blocks of Arctica (Hyerborea), Siberia, Bureya-Khanka continents and comprising Okhotsk and Central Kamchatka microcontinents. The sedimentary infill of the basin is represented mainly by terrigeneous and siliceous deposits of Late Cretaceous and, principally, of Cenozoic age, with some addition of volcaniclastic material. The thickness of sediments attains many thousands meters. By their geodynamic nature, the sedimentary basins of the Pacific margin of the Soviet Union belong to different types of basins recognized in active margin environment. Some are of the fore-arc type, among them Navarin Khatyrka, and North and East Sakhalin; others are of the back-arc type: West Kamchatka, Tartar Strait, and others. In the rear part of the margin the authors recognize the northern continuation of a huge continental rift system which includes the North China Bohai Bay and Sunliao basins. In the Soviet Union, this system comprises the Zeya-Bureya, Middle Amur, North Okhotsk, Markovo, and Anadyr basins. The basal strata of the basin's sedimentary infill, as a rule, gets younger from the mainland to the ocean. These sedimentary basins were subjected to rather moderate folding and high-angle faulting, which occurred mainly in the Pliocene and even the Pleistocene, and involved all the sequence of the basin infill. The traps are mostly structural, anticlinal or fault bounded. Reservoir rocks are represented by sandstones or fractured siliceous shales.

  7. Lithofacies control in detrital zircon provenance studies: Insights from the Cretaceous Methow basin, southern Canadian Cordillera

    USGS Publications Warehouse

    DeGraaff-Surpless, K.; Mahoney, J.B.; Wooden, J.L.; McWilliams, M.O.

    2003-01-01

    High-frequency sampling for detrital zircon analysis can provide a detailed record of fine-scale basin evolution by revealing the temporal and spatial variability of detrital zircon ages within clastic sedimentary successions. This investigation employed detailed sampling of two sedimentary successions in the Methow/Methow-Tyaughton basin of the southern Canadian Cordillera to characterize the heterogeneity of detrital zircon signatures within single lithofacies and assess the applicability of detrital zircon analysis in distinguishing fine-scale provenance changes not apparent in lithologic analysis of the strata. The Methow/Methow-Tyaughton basin contains two distinct stratigraphic sequences of middle Albian to Santonian clastic sedimentary rocks: submarine-fan deposits of the Harts Pass Formation/Jackass Mountain Group and fluvial deposits of the Winthrop Formation. Although both stratigraphic sequences displayed consistent ranges in detrital zircon ages on a broad scale, detailed sampling within each succession revealed heterogeneity in the detrital zircon age distributions that was systematic and predictable in the turbidite succession but unpredictable in the fluvial succession. These results suggest that a high-density sampling approach permits interpretation of finescale changes within a lithologically uniform turbiditic sedimentary succession, but heterogeneity within fluvial systems may be too large and unpredictable to permit accurate fine-scale characterization of the evolution of source regions. The robust composite detrital zircon age signature developed for these two successions permits comparison of the Methow/Methow-Tyaughton basin age signature with known plutonic source-rock ages from major plutonic belts throughout the Cretaceous North American margin. The Methow/Methow-Tyaughton basin detrital zircon age signature matches best with source regions in the southern Canadian Cordillera, requiring that the basin developed in close proximity to the

  8. Integrated Provenance Studies in Northwestern South America, Linking Tectonic and Sedimentary Processes

    NASA Astrophysics Data System (ADS)

    Montes, C.; Cardona, A.; Ramirez, V. O.; Bayona, G.; Ayala, C.; Valencia, V.

    2009-12-01

    Post-collisional late Eocene to Oligocene extensional basins (Plato-San Jorge basin in Colombia) and syn-collisional basins to the east contain the record of drainages and source areas as a former passive margin obliquely collided with the Caribbean deformation front. A 2 to 8 km thick, shallowing-upward and almost entirely fine-grained, upper Eocene and younger sedimentary sequence contains the record of post-collisional paleogeography behind the advancing deformation front. Sedimentation in the syn-collisional margin is fragmentary along the northern margins of Colombia and Venezuela in the Guajira province. An integrated provenance approach is being undertaken with detrital zircon geochronology, whole rock geochemistry, heavy mineral analysis and tectonic modeling. Source areas contain distinctive assemblages that should be diagnostic and include cratonic contributions with Grenville and older provinces, Andean contributions with Mesozoic-age signatures and Caribbean contributions with latest Cretaceous and Paleogene contributions. The complex Paleogene tectonic interactions along the northwestern South American margin include the simultaneous opening of basins (Plato-San Jorge basin in Colombia), micro-block rotation (Santa Marta massif), shortening and mountain building (Perija range) and oblique accretionary wedges along the margin (Sinu-San Jacinto deformed belts). Rivers draining the interior of South America to the north would have been deflected by this Paleogene configuration, and local drainages would have similarly developed in response to changing depocenters. Distinctive signatures should have developed in the sedimentary sequence as the sources dynamically changed from cratonic (Grenville and older cratonic) to Andean (Mesozoic continental crust and reworked) to Caribbean (volcanic arcs and collision zones).

  9. Petrofacies and provenance of late mesozoic forearc basin, northern and central California

    SciTech Connect

    Ingersoll, R.V.

    1983-07-01

    Data from the Great Valley Group (sequence) represent the most complete information regarding sandstone petrology of sediment derived from a magmatic arc. This information is useful in documenting tectonic and magmatic events within the arc and related terranes, and forms the basis for the establishment of petrostratigraphic units for mapping and correlation. Sandstone and conglomerate compositions are controlled by changes in provenance, many of which were basinwide and synchronous. Claymineral composition is controlled primarily by burial metamorphism. Careful attention to sample collection, sample preparation, and petrographic techniques is essential for uniform results. Seven petrographic parameters (P/F,Lv/L,M,Qp/Q,Q,F, and L-listed in decreasing importance to petrofacies discrimination) define eight petrofacies (Stony Creek, Platina, Lodoga, Grabast, Boxer, Cortina, Los Gatos and Rumsey-listed in approximate order of decreasing age). As the volcanic cover was stripped off, plutoniclastic and metamorphiclastic detritus from the underlying batholithic terranes was provided in abundance to the forearc basin. Crustal components were more ''continental'' in the southern Sierra Nevada and more ''oceanic'' in the northern Sierra Nevada, as demonstrated by the higher proportions of metamorphiclastic detritus and by the more felsic nature of volcaniclastic detritus to the south. By the middle of the Late Cretaceous, extensive batholithic terranes provided potassium-feldspar-rich arkosic detritus to the entire forearc basin. By the Paleogene, arc magmatism had migrated eastward sufficiently that deeper levels of the California part of the arc were exposed by erosion, tectonic activity decreased in the forearc basin, and the basin was filled to sea level in most parts.

  10. Forest phenology and a warmer climate - Growing season extension in relation to climatic provenance

    SciTech Connect

    Gunderson, Carla A; Edwards, Nelson T; Walker, Ashley V; O'Hara, Keiran H; Campion, Christina M; Hanson, Paul J

    2012-01-01

    Predicting forest responses to warming climates relies on assumptions about niche and temperature sensitivity that remain largely untested. Observational studies have related current and historical temperatures to phenological shifts, but experimental evidence is sparse, particularly for autumn responses. A five-year field experiment exposed four deciduous forest species from contrasting climates (Liquidambar styraciflua, Quercus rubra, Populus grandidentata, and Betula alleghaniensis) to air temperatures 2 and 4 C above ambient controls. Impacts of year-round warming on bud burst (BB), senescence and abscission were evaluated in relation to thermal provenance. Leaves emerged earlier in all species, by an average of 6-9 days at +2 and +4 C. Magnitude of advance varied with species and year, but was larger for the first 2 C increment than the second. The effect of warming increased with early BB, favoring Liquidambar, from the warmest climate, but even BB in northern species advanced, despite temperatures well beyond those of the realized niche. Treatment differences in BB were poorly explained by temperature sums, which increased with treatment. In autumn, chlorophyll was retained an average of 4 and 7 days longer in +2 and +4 C treatments, and abscission delayed by 8 and 13 days. Species differences in autumn responses were marginally significant. Growing seasons in the warmer atmospheres were 6 - 28 days longer, with the least impact in Quercus. Results are compared with a 16-year record of canopy onset and offset in a nearby upland deciduous forest, where BB showed similar responsiveness to spring temperatures (2 - 4 days C-1). Offset dates in the stand tracked August-September temperatures, except when late summer drought caused premature senescence. The common garden-like experimental approach provides evidence that warming alone extends the growing season, at both ends, even if stand-level impacts are complicated by other environmental factors.

  11. Proven high-reliability assembly methods applied to avionics fiber-optics high-speed transceivers

    NASA Astrophysics Data System (ADS)

    Lauzon, Jocelyn; Leduc, Lorrain; Bessette, Daniel; Bélanger, Nicolas; Larose, Robert; Dion, Bruno

    2012-06-01

    Harsh environment avionics applications require operating temperature ranges that can extend to, and exceed -50 to 115°C. For obvious maintenance, management and cost arguments, product lifetimes as long as 20 years are also sought. This leads to mandatory long-term hermeticity that cannot be obtained with epoxy or silicone sealing; but only with glass seal or metal solder or brazing. A hermetic design can indirectly result in the required RF shielding of the component. For fiber-optics products, these specifications need to be compatible with the smallest possible size, weight and power consumption. The products also need to offer the best possible high-speed performances added to the known EMI immunity in the transmission lines. Fiber-optics transceivers with data rates per fiber channel up to 10Gbps are now starting to be offered on the market for avionics applications. Some of them are being developed by companies involved in the "normal environment" telecommunications market that are trying to ruggedize their products packaging in order to diversify their customer base. Another approach, for which we will present detailed results, is to go back to the drawing boards and design a new product that is adapted to proven MIL-PRF-38534 high-reliability packaging assembly methods. These methods will lead to the introduction of additional requirements at the components level; such as long-term high-temperature resistance for the fiber-optic cables. We will compare both approaches and demonstrate the latter, associated with the redesign, is the preferable one. The performance of the fiber-optic transceiver we have developed, in terms of qualification tests such as temperature cycling, constant acceleration, hermeticity, residual gaz analysis, operation under random vibration and mechanical shocks and accelerated lifetime tests will be presented. The tests are still under way, but so far, we have observed no performance degradation of such a product after more than

  12. Using Motivational Interviewing with School-Age Bullies: A New Use for a Proven, Evidence-Based Intervention

    ERIC Educational Resources Information Center

    Juhnke, Brenna A.; Juhnke, Gerald A.; Curtis, Russell C.; Thompson, E. Heather; Coll, Kenneth M.; Yu, Fangzhou; Moyer, Michael S.; Mullett, Alison

    2013-01-01

    Motivational interviewing is a proven, evidence-based intervention. It has been successfully utilized as a potent intervention with students presenting a broad range of concerns from substance abuse to obesity. To date, however, no articles exist within the general counseling literature or the "Journal of School Counseling" specifically…

  13. Petrology and provenance of modern sands from Cascade Range Forearc and Canadian Rocky Mountain fold-thrust belt

    SciTech Connect

    Kretchmer, A.G.; Ingersoll, R.V.

    1987-05-01

    The Cascade Range volcanic arc and forearc, and the Canadian Rocky Mountain fold-thrust belt represent the two sides of a continental margin arc-trench system. Sands from these areas show clear compositional differences. The most significant discriminating parameters are volcanic lithic grains, metamorphic lithic grains, plagioclase-to-feldspar ratio, and quartz. Variable sediment composition is also evident within each setting. Cascade sands are volcaniclastic and have high plagioclase-to-feldspar ratios. They divide into three categories (volcanic arc, alluvial forearc, and coastal forearc) that differ in their lithic contents and plagioclase-to-feldspar ratios. These changes reflect the attrition of volcanic lithics with distance from the arc and the input of recycled sediment and subduction-complex lithologies. Rocky Mountain sands are sedimenticlastic. They are of two types, a miogeocline-shelf provenance and a clastic-wedge provenance. These linear belts differ in clastic-carbonate content, plagioclase-to-feldspar ratio, and quartz content. The compositional differences reflect interstratified petrofacies of fold-thrust belts. Just as they can use detrital modes of modern sands to characterize provenance and tectonic setting, modes of ancient sandstones help up to recognize provenance terranes and reconstruct paleotectonic settings.

  14. Provenance determination of oriental porcelain using laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS).

    PubMed

    Bartle, Emma K; Watling, R John

    2007-03-01

    The sale of fraudulent oriental ceramics constitutes a large proportion of the illegal artifact and antique trade and threatens to undermine the legitimate international market. The sophistication and skill of forgers has reached a level where, using traditional appraisal by eye and hand, even the most experienced specialist is often unable to distinguish between a genuine and fraudulent piece. In addition, current provenancing techniques such as energy-dispersive X-ray fluorescence (EDXRF) spectrometry and thermoluminescence (TL) dating can result in significant damage to the artifact itself. Laser ablation-inductively coupled plasma-mass spectrometry (LA-ICP-MS), a relatively nondestructive analytical technique, has been used for the provenance determination of materials based on geographical origin. The technique requires the production of a laser crater, c. 100 microm in diameter, which is essentially invisible to the naked eye. Debris from this crater is analyzed using ICP-MS, with the results forming the basis of the provenance establishment protocol. Chinese, Japanese, and English porcelain shards have been analyzed using this protocol and generic isotopic distribution patterns have been produced that enable the provenance establishment of porcelain artifacts to their country of production. Minor variations between elemental fingerprints of artifacts produced in the same country also indicate that it may be possible to further provenance oriental ceramics to a specific production region or kiln site.

  15. Provenance and sediment dynamics within river basins in Western Peru through detrital zircons U-Pb ages

    NASA Astrophysics Data System (ADS)

    Camille, Litty; Pierre, Lanari; Marco, Burn; Fritz, Schlunegger

    2016-04-01

    U-Pb dating of detrital zircons from clastic sediments by LA-ICPMS has become a popular method in sedimentary correlation and provenance studies. Because of remarkable durability, detrital zircons may be reworked through multiple sedimentary cycles and provide an ideal material to study the sedimentary provenance in rivers and the erosional characteristics. The Western side of the Peruvian Andes has experienced multiple pluvial periods induced phases of erosion and the formation of subsequent cut-and-fill terrace sequences since the Pleistocene. The aim of the study is to estimate the source areas of the terrace and modern deposits to infer changes in sediment dynamics through time and correlate them with the climatic change and especially precipitation patterns. To this extent, we determined the provenance of 4 dated terrace deposits along with modern sediments from the same streams by matching detrital-zircon ages with crystallization ages of source rocks. Age populations of detrital zircons are derived using U-Pb LA-ICP-MS analysis of about 50 zircons. Results show changes in the sediment provenance through time. Nowadays, sediment source areas are mainly located on the uppermost reach of the rivers whereas during the Pleistocene, sediment source areas were both located in the headwaters and along the middle reach of the rivers. These differences in terms of provenance could correlate with a change in precipitation locations and rates. Indeed a scenario where the locus of precipitation occurrence shifted from the middle reaches including the Altiplano during the past, to the Altiplano only as observed today, along with higher precipitation rates during the periods of terraces formation, offers an explanation to explain the erosional patterns recorded by detrital zircons.

  16. Integrated provenance analysis of Zakeen (Devonian) and Faraghan (early Permian) sandstones in the Zagros belt, SW Iran

    NASA Astrophysics Data System (ADS)

    Zoleikhaei, Yousef; Amini, Abdolhossein; Zamanzadeh, S. Mohammad

    2015-01-01

    Successions of a controversial period of time in the Zagros and Arabian Plate stratigraphic column, including Zakeen (Devonian) and Faraghan (early Permian) formations are investigated for their provenance characteristics. Nearly similar depositional environments of the formations, regardless of 70-80 My hiatus between them, is the main motivation for this study. Evidence from various methods are put together to reconstruct a comprehensive image of their provenance. Results from petrographic and detrital mode analysis indicate a continental block provenance for of the sandstones of both formations. In addition, evidence of recycling is evident from some rock fragments in the conglomeratic facies. Heavy mineral diversities are limited to the ultra-stable species which represent consistent morphological characteristics in both formations. However, the values of rutile: zircon index (RZi) showed intermittent changes from low RZi to high RZi intervals in both formations. Detrital zircon age data in previous studies represented the same source for these two formations, which also remained unchanged from Neo-Proterozoic to late Paleozoic successions. Zircon grains' morphology, however, showed remarkable difference between the Zakeen and Faraghan formations on the one hand and successions deposited in the basin prior to the tectonic movements of mid-Paleozoic time on the other. Outcomes of this study show that, although each single technique may shed light on a particular aspect of the greater provenance problem, by integration of all the data, important evidence of recycled nature of these successions could be confirmed. Changes in the thickness of the Paleozoic units, the nature of their stratal surfaces, along with the information from magmatic events in the area provide a tectono-stratigraphic framework for northern margin of Gondwana in which the recycled nature of these successions is justifiable. The recycled nature of the studied formations on the one hand, and

  17. Citation and Recognition of contributions using Semantic Provenance Knowledge Captured in the OPeNDAP Software Framework

    NASA Astrophysics Data System (ADS)

    West, P.; Michaelis, J.; Lebot, T.; McGuinness, D. L.; Fox, P. A.

    2014-12-01

    Providing proper citation and attribution for published data, derived data products, and the software tools used to generate them, has always been an important aspect of scientific research. However, It is often the case that this type of detailed citation and attribution is lacking. This is in part because it often requires manual markup since dynamic generation of this type of provenance information is not typically done by the tools used to access, manipulate, transform, and visualize data. In addition, the tools themselves lack the information needed to be properly cited themselves. The OPeNDAP Hyrax Software Framework is a tool that provides access to and the ability to constrain, manipulate, and transform, different types of data from different data formats, into a common format, the DAP (Data Access Protocol), in order to derive new data products. A user, or another software client, specifies an HTTP URL in order to access a particular piece of data, and appropriately transform it to suit a specific purpose of use. The resulting data products, however, do not contain any information about what data was used to create it, or the software process used to generate it, let alone information that would allow the proper citing and attribution to down stream researchers and tool developers. We will present our approach to provenance capture in Hyrax including a mechanism that can be used to report back to the hosting site any derived products, such as publications and reports, using the W3C PROV recommendation pingback service. We will demonstrate our utilization of Semantic Web and Web standards, the development of an information model that extends the PROV model for provenance capture, and the development of the pingback service. We will present our findings, as well as our practices for providing provenance information, visualization of the provenance information, and the development of pingback services, to better enable scientists and tool developers to be

  18. Non-destructive infrared analyses: a method for provenance analyses of sandstones

    NASA Astrophysics Data System (ADS)

    Bowitz, Jörg; Ehling, Angela

    2008-12-01

    Infrared spectroscopy (IR spectroscopy) is commonly applied in the laboratory for mineral analyses in addition to XRD. Because such technical efforts are time and cost consuming, we present an infrared-based mobile method for non-destructive mineral and provenance analyses of sandstones. IR spectroscopy is based on activating chemical bonds. By irradiating a mineral mixture, special bonds are activated to vibrate depending on the bond energy (resonance vibration). Accordingly, the energy of the IR spectrum will be reduced thereby generating an absorption spectrum. The positions of the absorption maxima within the spectral region indicate the type of the bonds and in many cases identify minerals containing these bonds. The non-destructive reflection spectroscopy operates in the near infrared region (NIR) and can detect all common clay minerals as well as sulfates, hydroxides and carbonates. The spectra produced have been interpreted by computer using digital mineral libraries that have been especially collected for sandstones. The comparison of all results with XRD, RFA and interpretations of thin sections demonstrates impressively the accuracy and reliability of this method. Not only are different minerals detectable, but also differently ordered kaolinites and varieties of illites can be identified by the shape and size of the absorption bands. Especially clay minerals and their varieties in combination with their relative contents form the characteristic spectra of sandstones. Other components such as limonite, hematite and amorphous silica also influence the spectra. Sandstones, similar in colour and texture, often can be identified by their characteristic reflectance spectra. Reference libraries with more than 60 spectra of important German sandstones have been created to enable entirely computerized interpretations and identifications of these dimension stones. The analysis of infrared spectroscopy results is demonstrated with examples of different sandstones

  19. Advances in Provenance Tracking and Configuration Management for Earth Science Data

    NASA Astrophysics Data System (ADS)

    Barkstrom, B. R.

    2008-12-01

    Production of Earth science data involves two different production paradigms: 1. Large scale, batch production in which a network of programs and files create a collection of data for access by users 2. Small scale, fine-grained production in which users interact with data in files or databases These two paradigms lead to two different models for configuration management of data. The first model is one that recognizes that data production is similar to other large-scale manufacturing processes and inventories both the collection of files, the processes the produce them, and the connections between the files and the processes. This model requires traversing the mathematical graph created by the network of processes and files. The second model is better described as a workflow that modifies the data by fine- grained transactions. In this case, provenance tracking is equivalent to tracking the history of transactions created by the workflow. In the large scale production paradigm, the rates of data ingest and the number of processes and files is sufficiently large that production needs to be automated. For example, in the upcoming NPOESS Preparatory Project (NPP), a typical time granularity for ingested data files is about 86 seconds. A single spectral channel from the VIIRS instrument on this satellite produces about 1000 files per day of calibrated data. Given the large number of channels on this instrument, production must be highly automated. An archive must be prepared to catalog millions of files per year. In this situation, data producers operate by creating source code that the production system compiles and links into executable objects. The executable code is often unchanged over many instances, so that production is very homogeneous over extended periods of time. This fact means that versioning of data products is also quite discrete and leads naturally to a hierarchical inventory structure. In the small scale production paradigm, the number of files is

  20. Sedimentary and geochemical characterization and provenance of the Portuguese continental shelf soft-bottom sediments

    NASA Astrophysics Data System (ADS)

    Martins, R.; Azevedo, M. R.; Mamede, R.; Sousa, B.; Freitas, R.; Rocha, F.; Quintino, V.; Rodrigues, A. M.

    2012-03-01

    Grain-size and geochemical analyses for soft-bottom sediments from the Portuguese continental shelf are used to determine their provenance and to identify the main factors governing the sediment distribution patterns. The deeper areas of the northwestern and central sectors of the Portuguese shelf and most of its southwestern sector are covered by fine and very fine sands. Coarse deposits are found in the inner and middle shelf of the northernmost sector and immediately south of the Nazaré and Setúbal canyons, while muddy sediments are restricted to areas located off the mouths of major rivers (Douro and Tagus mud patches). In contrast, the southern shelf corresponds to a low energy environment receiving most of its sediment supply from the Guadiana River. As a result, an expressive mud patch is developed off the Guadiana estuarine system. The application of multivariate analysis to geochemical data allowed the classification of the studied samples into four main groups: (a) a group of mud deposits constituted by detrital clay minerals and authigenic iron-manganese oxyhydroxides, displaying high contents for organic matter and for most major and trace elements; (b) a group of biogenic carbonate-rich sands showing high CaO, Sr and U contents which is well represented throughout the entire Portuguese shelf; (c) a group of quart-rich sediments, with very high SiO 2 contents and moderate Al 2O 3, K 2O and TiO 2 contents, supporting a major terrigenous contribution and (d) a group of coarse sand samples with high As levels from off important rivers, pointing to anthropogenic contamination. Trace metal enrichments observed in the muddy areas from both the western and southern coasts appear to result from natural causes and do not exceed the international sediment quality thresholds. There is, however, local evidence for As, Zn, Cr and Pb anthropogenic contamination in near-shore sediments associated with rivers draining regions characterized by urban, industrial or

  1. Mesozoic tectonics of the Arctic: New constraints from provenance studies,Taimyr, Russia

    NASA Astrophysics Data System (ADS)

    Zhang, X.; Pease, V.

    2013-12-01

    Understanding the tectonic development of the Arctic Ocean is important for understanding global tectonics and the framework of petroleum and mineral resources in the Arctic area. The Eurasia and Amerasia basins are the principal physiographic domains of the Arctic Ocean. The Eurasia Basin is known to be the result of slow seafloor spreading; the origin of the Amerasia Basin however remains controversial. Lack of information on the timing, structure, and geochemistry of geological units around the Amerasia Basin limits our ability to understand its development. The Taimyr Peninsula where Mesozoic deformation is well-developed provides a natural laboratory to investigate the tectonic development of the Amerasia Basin. Provenance studies of Taimyr constrain the source areas of Mesozoic sediments in the region and thus identify affinities between them. Detrital zircons from six samples of Triassic and Jurassic sandstone from Southern Taimyr were dated using LA-ICP-MS to test existing models for the opening of the Amerasia Basin. Two Triassic samples present great similarity in detrital zircon population with Triassic sandstone from the paleo-Taimyr river system, including Chukotka, the Wrangel Island and the New Siberian Islands. These samples all contain Permo-Triassic (236 - 250 Ma), Permo-Carboniferous (260 - 330 Ma), Devonian (340 - 390 Ma) late Precambrian-Silurian (420 - 580 Ma) and Neoproterozoic (620 - 1000 Ma) zircons. These detrital zircon ages suggest Triassic sediments in these locations may have been derived from Siberia Trap, Taimyr and the Ural Mountains of Arctic Russia. It is therefore likely that Taimyr, Chukotka, the Wrangel Island and the New Siberian Islands which are separated at present were close to each other or belonged to the same large drainage system before the opening of the Amerasia Basin. Two Middle Jurassic samples and two Upper Jurassic samples from Taimyr have dominant Permo-Triassic peaks (246 - 260 Ma) suggesting a proximal source

  2. Nuclear Thermal Propulsion (NTP): A Proven Growth Technology for Human NEO/Mars Exploration Missions

    NASA Technical Reports Server (NTRS)

    Borowski, Stanley K.; McCurdy, David R.; Packard, Thomas W.

    2012-01-01

    The nuclear thermal rocket (NTR) represents the next "evolutionary step" in high performance rocket propulsion. Unlike conventional chemical rockets that produce their energy through combustion, the NTR derives its energy from fission of Uranium-235 atoms contained within fuel elements that comprise the engine s reactor core. Using an "expander" cycle for turbopump drive power, hydrogen propellant is raised to a high pressure and pumped through coolant channels in the fuel elements where it is superheated then expanded out a supersonic nozzle to generate high thrust. By using hydrogen for both the reactor coolant and propellant, the NTR can achieve specific impulse (Isp) values of 900 seconds (s) or more - twice that of today s best chemical rockets. From 1955 - 1972, twenty rocket reactors were designed, built and ground tested in the Rover and NERVA (Nuclear Engine for Rocket Vehicle Applications) programs. These programs demonstrated: (1) high temperature carbide-based nuclear fuels; (2) a wide range of thrust levels; (3) sustained engine operation; (4) accumulated lifetime at full power; and (5) restart capability - all the requirements needed for a human Mars mission. Ceramic metal "cermet" fuel was pursued as well, as a backup option. The NTR also has significant "evolution and growth" capability. Configured as a "bimodal" system, it can generate its own electrical power to support spacecraft operational needs. Adding an oxygen "afterburner" nozzle introduces a variable thrust and Isp capability and allows bipropellant operation. In NASA s recent Mars Design Reference Architecture (DRA) 5.0 study, the NTR was selected as the preferred propulsion option because of its proven technology, higher performance, lower launch mass, versatile vehicle design, simple assembly, and growth potential. In contrast to other advanced propulsion options, no large technology scale-ups are required for NTP either. In fact, the smallest engine tested during the Rover program

  3. Data Quality, Provenance and IPR Management services: their role in empowering geospatial data suppliers and users

    NASA Astrophysics Data System (ADS)

    Millard, Keiran

    2015-04-01

    This paper looks at current experiences of geospatial users and geospatial suppliers and how they have been limited by suitable frameworks for managing and communicating data quality, data provenance and intellectual property rights (IPR). Current political and technological drivers mean that increasing volumes of geospatial data are available through a plethora of different products and services, and whilst this is inherently a good thing it does create a new generation of challenges. This paper consider two examples of where these issues have been examined and looks at the challenges and possible solutions from a data user and data supplier perspective. The first example is the IQmulus project that is researching fusion environments for big geospatial point clouds and coverages. The second example is the EU Emodnet programme that is establishing thematic data portals for public marine and coastal data. IQmulus examines big geospatial data; the data from sources such as LIDAR, SONAR and numerical simulations; these data are simply too big for routine and ad-hoc analysis, yet they could realise a myriad of disparate, and readily useable, information products with the right infrastructure in place. IQmulus is researching how to deliver this infrastructure technically, but a financially sustainable delivery depends on being able to track and manage ownership and IPR across the numerous data sets being processed. This becomes complex when the data is composed of multiple overlapping coverages, however managing this allows for uses to be delivered highly-bespoke products to meet their budget and technical needs. The Emodnet programme delivers harmonised marine data at the EU scale across seven thematic portals. As part of the Emodnet programme a series of 'check points' have been initiated to examine how useful these services and other public data services actually are to solve real-world problems. One key finding is that users have been confused by the fact that often

  4. Lait humain provenant d’une banque de dons ou acheté en ligne?

    PubMed Central

    St-Onge, Maude; Chaudhry, Shahnaz; Koren, Gideon

    2015-01-01

    Résumé Question Une de mes patientes m’a demandé si elle pourrait se procurer du lait humain par Internet pour allaiter son nourrisson s’il le fallait. L’usage de lait humain provenant d’une banque de dons est-il plus sécuritaire que son achat en ligne? Réponse L’Organisation mondiale de la Santé et l’American Academy of Pediatrics recommandent d’utiliser des dons de lait humain comme choix à privilégier lorsque le lait maternel n’est pas disponible. Cependant, la Société canadienne de pédiatrie n’approuve pas le partage de lait humain non traité. Le lait humain entreposé dans les banques de lait diffère de celui qu’on peut se procurer par Internet en raison du processus rigoureux de sélection des donneuses, des fréquentes inspections de la qualité, des procédés de transport règlementés et du processus de pasteurisation conforme aux directives établies par l’Agence canadienne d’inspection des aliments. La plupart des échantillons achetés en ligne contiennent des bactéries à gram négatif ou comptent au total plus de 104 unités formant colonies de bactéries aérobiques par millilitre; ils renferment aussi en moyenne au décompte total plus de bactéries aérobiques, de bactéries à gram négatif, de coliformes et de Staphylococcus spp que les échantillons des banques de lait. La croissance de la plupart des espèces de bactéries est associée au nombre de jours en transit, ce qui porte à croire que les conditions de collecte, d’entreposage et de transport sont médiocres pour le lait acheté en ligne.

  5. Spatial heterogeneity of Greenland ice-core dust composition and provenance

    NASA Astrophysics Data System (ADS)

    Bory, A.; Biscaye, P.; Piotrowski, A.; Steffensen, J. P.

    2003-04-01

    By comparing mineralogical and isotopic (Sr and Nd) composition of mineral dust extracted from Greenland ice-cores and snow deposits with that of fine particles in sediment samples from potential source areas (PSA) for Greenland dust, it has been shown that eastern Asia was the source for central Greenland dust during several intervals of the last Glacial period [Biscaye et al., 1997; Svensson et al., 2000], in two intervals of the Holocene [Svensson, 1998], and through the present day [Bory et al., 2002; Bory et al., in press]. Based on transport patterns, it has often been suggested, however, that North American and African dust could reach the Greenland ice cap. Mosher et al. [1993], for instance, claimed to have identified an African source for a dust event at Dye 3 in southern Greenland. Identifying possible non-Asian dust sources to Greenland is important since it would bear on the large temporal variability of ice-core dust concentration, whose causes remain largely unexplained, as well as on the validation of dust transport models. Determining the degree of spatial heterogeneity of Greenland dust composition, and therefore provenance, can be done by analyzing contemporaneous dust samples in as many locations as possible. Here we report on six samples from six Greenland ice-cores, representing several decades of dust deposition each, all expect one within the 17th and 18th century. The six locations (Dye 3, A8-Crete region, Renland, GRIP, NorthGRIP, Hans Tausen) range from 65-82^oN and 27-43^oW. Variations in tracers composition (mineralogical and isotopic) are apparent, particularly between sites located on top of the ice cap and those located around the periphery, reflecting a distribution with altitude of dust sources and transport patterns to the ice-cap. The lower altitude sites are likely to be influenced by proximal dust sources. These results, however, confirm that long-range dust transport from eastern Asia is the main source of dust deposited on

  6. Ignored Issues in e-Science: Collaboration, Provenance and the Ethics of Data

    NASA Astrophysics Data System (ADS)

    Hourcle, J. A.

    2009-12-01

    The issues of collaboration, provenance and the ethics of data are not new, but have existed for quite some time. The issue is in how to change the attitudes of the scientists that theses issues are worth their time to deal with, and how the scientists can easily learn what the necessary steps are to ensure that their data can be used by the greater community. At NASA, there have been changes to the heliophysics data policy which now mentions a need to integrate into the larger data environment [NASA, 2009]. This integration aspect is key, as simple linkages between discrete collections are not enough for effective and efficient reuse of scientific data. As each scientific mission funded by NASA is novel in some way, there is a belief by many scientists that every data system must be rebuilt from the ground up as well. Although there are often needs to tune systems to meet the needs of the primary investigation, there are limited, if any controls to ensure that the data systems can interoperate with the system of virtual observatories and other cross-discipline efforts being designed and implemented. We need to find a way to break the 'not-created-here' mentality, and push for PI teams to consider how to support the general science in their discipline when implementing their interfaces. We need to tell them what the requirements are for interfacing with the community search systems, and give PI teams a way to get advice on designing and implementing their data system in a way that doesn't create roadblocks to the greater community's attempts at using their data. If we had simple requirements checklists to explain the needs of each discipline, we could give scientists and reviewers an easy way to guage how useful and accesible the system would be. We present a generic checklist developed primarily for file-based feature and event catalogs [Hourcle, 2009], in hopes of inspiring others to develop similar requirements documents for each scientific discipline and to

  7. Provenance of things - describing geochemistry observation workflows using PROV-O

    NASA Astrophysics Data System (ADS)

    Cox, S. J. D.; Car, N. J.

    2015-12-01

    Geochemistry observations typically follow a complex preparation process after sample retrieval from the field. Description of these are required to allow readers and other data users to assess the reliability of the data produced, and to ensure reproducibility. While laboratory notebooks are used for private record-keeping, and laboratory information systems (LIMS) on a facility basis, this data is not generally published, and there are no standard formats for transfer. And while there is some standardization of workflows, this is often scoped to a lab, or an instrument. New procedures and workflows are being developed continually - in fact this is a key expectation in the development of the science. Thus formalization of the description of sample preparation and observations must be both rigorous and flexible. We have been exploring the use of the W3C Provenance model (PROV) to capture complete traces, including both the real world things and the data generated. PROV has a core data model that distinguishes between entities, agents and activities involved in producing a piece of data or thing in the world. While the design of PROV was primarily conditioned by stories concerning information resources, application is not restricted to the production of digital or information assets. PROV allowing a comprehensive trace of predecessor entities and transformations at any level of detail. In this paper we demonstrate the use of PROV for describing specimens managed for scientific observations. Two examples are considered: a geological sample which undergoes a typical preparation process for measurements of the concentration of a particular chemical substance, and the collection, taxonomic classification and eventual publication of an insect specimen. PROV enables the material that goes into the instrument to be linked back to the sample retrieved in the field. This complements the IGSN system, which focuses on registration of field sample identity to support the

  8. Detrital provenance of the Grenvillian Oaxacan Complex, southern Mexico: a zircon perspective

    NASA Astrophysics Data System (ADS)

    Solari, Luigi A.; Ortega-Gutiérrez, Fernando; Elías-Herrera, Mariano; Ortega-Obregón, Carlos; Macías-Romo, Consuelo; Reyes-Salas, Margarita

    2014-07-01

    The Oaxacan Complex is the largest exposure of Grenvillian-age rocks in Mexico, constituting the backbone of the Oaxaquia microcontinent. Whereas the main rock-forming events were previously established at 1,150-1,200 Ma (charnockite-syenite-gabbros), 1,020 Ma (AMCG suite), 990 Ma (granulite-facies metamorphism), and ca. 970 Ma post-tectonic pegmatites, no data are yet available to establish provenance links with other Grenville-age terranes. In this work, we studied detrital zircons belonging to 12 samples, all metamorphosed under granulite facies but variably affected by retrogression. Laser ablation inductively coupled plasma mass spectrometry U-Pb geochronology was employed on selected zircons to determine their crystallization age and geochemistry. The results of the analysis of about 100 crystals per sample show that the studied zircons range between ca. 940 and 1,400 Ma, with only three samples having zircons between 1,400 and 1,600 Ma, and only one showing older zircons up to ca. 1,775 Ma. Whereas some of the slightly discordant (1-5 %) zircons in several samples show ages younger than the granulite metamorphism (probably as a result of Pb loss), and thus a disturbed geochemical pattern (abnormal enrichment in LREE, decreasing HREE), a few metamorphic zircons show flat and depleted HREE patterns, contrasting with the igneous pattern of older zircons (positive Ce anomaly, negative Eu anomaly, enriched HREE pattern). The main distributions observed using the kernel density estimator diagrams fall in the range 975-995 Ma (six samples), 1,100 Ma (four samples) and 1,120-1,170 Ma (six samples). Only the southernmost sample shows a marked peak at ca. 1,400 Ma. The application of the Kolmogorov-Smirnov (K-S) statistical test to the studied samples and particularly the comparison of obtained P values yield interesting similarities. Overall, two sample groups show internal similarities, i.e., they may belong to the same source area, whereas only one sample is

  9. Provenance and diagenesis of the evaporite-bearing Burns formation, Meridiani Planum, Mars

    USGS Publications Warehouse

    McLennan, S.M.; Bell, J.F.; Calvin, W.M.; Christensen, P.R.; Clark, B. C.; de Souza, P.A.; Farmer, J.; Farrand, W. H.; Fike, D.A.; Gellert, Ralf; Ghosh, A.; Glotch, T.D.; Grotzinger, J.P.; Hahn, B.; Herkenhoff, K. E.; Hurowitz, J.A.; Johnson, J. R.; Johnson, S.S.; Jolliff, B.; Klingelhofer, G.; Knoll, A.H.; Learner, Z.; Malin, M.C.; McSween, H.Y.; Pocock, J.; Ruff, S.W.; Soderblom, L.A.; Squyres, S. W.; Tosca, N.J.; Watters, W.A.; Wyatt, M.B.; Yen, A.

    2005-01-01

    Impure reworked evaporitic sandstones, preserved on Meridiani Planum, Mars, are mixtures of roughly equal amounts of altered siliciclastic debris, of basaltic provenance (40 ?? 10% by mass), and chemical constituents, dominated by evaporitic minerals (jarosite, Mg-, Ca-sulfates ?? chlorides ?? Fe-, Na-sulfates), hematite and possibly secondary silica (60 ?? 10%). These chemical constituents and their relative abundances are not an equilibrium evaporite assemblage and to a substantial degree have been reworked by aeolian and subaqueous transport. Ultimately they formed by evaporation of acidic waters derived from interaction with olivine-bearing basalts and subsequent diagenetic alteration. The rocks experienced an extended diagenetic history, with at least two and up to four distinct episodes of cementation, including stratigraphically restricted zones of recrystallization and secondary porosity, non-randomly distributed, highly spherical millimeter-scale hematitic concretions, millimeter-scale crystal molds, interpreted to have resulted from dissolution of a highly soluble evaporite mineral, elongate to sheet-like vugs and evidence for minor synsedimentary deformation (convolute and contorted bedding, possible teepee structures or salt ridge features). Other features that may be diagenetic, but more likely are associated with relatively recent meteorite impact, are meter-scale fracture patterns, veins and polygonal fractures on rock surfaces that cut across bedding. Crystallization of minerals that originally filled the molds, early cement and sediment deformation occurred syndepositionally or during early diagenesis. All other diagenetic features are consistent with formation during later diagenesis in the phreatic (fluid saturated) zone or capillary fringe of a groundwater table under near isotropic hydrological conditions such as those expected during periodic groundwater recharge. Textural evidence suggests that rapidly formed hematitic concretions post

  10. Provenance of Tertiary volcanoclastic sediment in NW Thrace (Bulgaria): Evidence from detrital amphibole and pyroxene geochemistry

    NASA Astrophysics Data System (ADS)

    Caracciolo, Luca; Orlando, Andrea; Marchev, Peter; Critelli, Salvatore; Manetti, Piero; Raycheva, Raya; Riley, David

    2016-05-01

    Detrital heavy mineral and bulk rock geochemistry and a review of sandstone petrographic data have been used to investigate the post-collisional effusive magmatism that followed the closure of the Vardar Ocean and the generation of volcanic sediments in a complex and compositionally variable volcanic region. Available petrographic data gives evidence of contributions from three key source areas corresponding to the three main tectonic units: the structurally lower Gneiss-Migmatite Complex (Byala Reka-Kechros and Kesebir-Kardamos domes) and the upper Variegated (Kimi) Complex, both fringed by the low-to-medium-grade Mesozoic rocks of the Circum-Rhodope Belt. Besides the deposition of siliciclastic material, volcanic contributions from both, intermediate and acid products represent an important source of sediment in the area. Despite dominant intermediate to acid volcanic products, volcanic lithic fragments in sandstones (microlithic, lathwork and brown vitric textures) indicate main inputs from intermediate and basic-intermediate products generating questions on the interpretation of volcanic detritus in reconstruction of provenance. Detrital amphibole and pyroxene chemistry is used to characterise the supply of volcanic material as well as the dispersal mechanisms and understand the role played by each of the volcanic centers present in the area in the infill of the north-western Thrace basin. Amphibole chemistry reveals high compositional heterogeneity according to both compositional variability of the numerous volcanic centres active at the time of deposition and presence of metamorphic amphibole. 4Al and AlT apfu values indicate that most of the amphiboles from the NERZ are not of volcanic origin and their presence can only be attributed to the numerous amphibolite facies metamorphic rocks abundantly documented in the area. Detrital amphibole compositions from the ZKVS indicate major contributions from the Iran Tepe and Zvedzel volcanoes. Analysed detrital

  11. Sediment Provenance in the Equatorial Atlantic and its Implications on Paleocirculation

    NASA Astrophysics Data System (ADS)

    Pahler, S. H.; Franzese, A. M.; Hemming, S. R.

    2005-12-01

    Ocean circulation in the Equatorial Atlantic is composed of a diverse range of currents from the surface level equatorial currents and countercurrents to the North Atlantic Deep Water (NADW). Sediments deposited in this region are derived from Africa and South America by a combination of aeolian and fluvial pathways and then transported by ocean currents. Fifteen cores from the Equatorial Atlantic (10°N to 10°S, 0° to 45°W) were used to determine sediment provenance during the Holocene and Last Glacial Maximum (LGM), and specifically to test whether sediment was transported by surface or deep water currents. The radiogenic isotopic composition of any rock depends on its age, initial composition and its geologic history. The strontium isotopic composition of the terrigenous portion of marine sediments can often be used to identify the source rock(s) from which they weathered. By incorporating this new sediment core data from both Holocene and LGM depths with previous research designating the 87Sr/86Sr ratios for source areas in Africa and South America we were able to connect possible source areas with core locations. In general, the 87Sr/86Sr ratios from the Holocene are higher than those from the LGM, indicating a greater contribution from geologically older sediment sources during the Holocene. Primary sediment transport from African sources is best explained by wind transport, while sediment derived from South American sources is most easily explained by river input. The geographic pattern of 87Sr/86Sr ratios appears to be correlated to deep ocean circulation, specifically the NADW which flows southward along the western side of the Atlantic near South America and then cuts east along the Romanche Fracture Zone (RFZ, ~0°) before continuing south once again in the eastern basin near Africa. Based on our results, there is no observable difference in transport mechanisms between the Holocene and LGM; however, the difference in ratios between the two time

  12. Provenance of the Subinal Formation, Central Guatemala, Based on Point-Counting of Pebbles in Conglomerates

    NASA Astrophysics Data System (ADS)

    Gutierrez, A.; Martens, U.

    2007-05-01

    milky quartz. Pebbles were probably derived from the underlying Padre Miguel volcanics that occur within the Chortis block, not from rock units in the Motagua suture zone. Pebbles contained in red beds in the Motagua valley were derived from rock units of the Motagua suture and the southern margin of the Maya block, but provenance from rock of the Chortis block is not clear. These findings suggest that red-bed-bearing basins in the Motagua valley and in the southeast of Guatemala were not connected, and may have formed at disparate times.

  13. Provenance and diagenesis of the evaporite-bearing Burns formation, Meridiani Planum, Mars

    NASA Astrophysics Data System (ADS)

    McLennan, S. M.; Bell, J. F.; Calvin, W. M.; Christensen, P. R.; Clark, B. C.; de Souza, P. A.; Farmer, J.; Farrand, W. H.; Fike, D. A.; Gellert, R.; Ghosh, A.; Glotch, T. D.; Grotzinger, J. P.; Hahn, B.; Herkenhoff, K. E.; Hurowitz, J. A.; Johnson, J. R.; Johnson, S. S.; Jolliff, B.; Klingelhöfer, G.; Knoll, A. H.; Learner, Z.; Malin, M. C.; McSween, H. Y.; Pocock, J.; Ruff, S. W.; Soderblom, L. A.; Squyres, S. W.; Tosca, N. J.; Watters, W. A.; Wyatt, M. B.; Yen, A.

    2005-11-01

    Impure reworked evaporitic sandstones, preserved on Meridiani Planum, Mars, are mixtures of roughly equal amounts of altered siliciclastic debris, of basaltic provenance (40 ± 10% by mass), and chemical constituents, dominated by evaporitic minerals (jarosite, Mg-, Ca-sulfates ± chlorides ± Fe-, Na-sulfates), hematite and possibly secondary silica (60 ± 10%). These chemical constituents and their relative abundances are not an equilibrium evaporite assemblage and to a substantial degree have been reworked by aeolian and subaqueous transport. Ultimately they formed by evaporation of acidic waters derived from interaction with olivine-bearing basalts and subsequent diagenetic alteration. The rocks experienced an extended diagenetic history, with at least two and up to four distinct episodes of cementation, including stratigraphically restricted zones of recrystallization and secondary porosity, non-randomly distributed, highly spherical millimeter-scale hematitic concretions, millimeter-scale crystal molds, interpreted to have resulted from dissolution of a highly soluble evaporite mineral, elongate to sheet-like vugs and evidence for minor synsedimentary deformation (convolute and contorted bedding, possible teepee structures or salt ridge features). Other features that may be diagenetic, but more likely are associated with relatively recent meteorite impact, are meter-scale fracture patterns, veins and polygonal fractures on rock surfaces that cut across bedding. Crystallization of minerals that originally filled the molds, early cement and sediment deformation occurred syndepositionally or during early diagenesis. All other diagenetic features are consistent with formation during later diagenesis in the phreatic (fluid saturated) zone or capillary fringe of a groundwater table under near isotropic hydrological conditions such as those expected during periodic groundwater recharge. Textural evidence suggests that rapidly formed hematitic concretions post

  14. The altarpieces of Della Robbia atelier in Marche region: investigations on technology and provenance

    NASA Astrophysics Data System (ADS)

    Amadori, M. L.; Barcelli, S.; Barcaioni, S.; Bouquillon, A.; Padeletti, G.; Pallante, P.

    2013-12-01

    Dissemination of Della Robbia glazed terracotta in the Marche (Italy) region started from the third decade of the 16th century. Numerous altarpieces, some of which no longer exist, document this artistic production. The protagonists of this diffusion phase were two of Andrea Della Robbia's sons, Marco (Fra Mattia) and Francesco (Fra Ambrogio). This paper shows the results of the scientific investigations carried out on constitutive materials of different altarpieces located in South Marche belonging to the Fra Mattia's production: the Coronation of Virgin between Saints Rocco, Sebastian, Peter martyr and Antonio abbot, dated back to 1527-1530, located in the collegiate church of S. Maria Assunta in Montecassiano; the Annunciation, dated back to 1520, placed in the church of S. Maria del Soccorso in Arcevia; the fragmentary Crowned Madonna and saints altarpiece, probably realized after 1531, today preserved in Civic Museum of Ripatransone. The first altarpiece was made in Montecassiano using two different assembling or production techniques: the external part of the lunette and the pillar strips are made of glazed polychrome terracotta, while the altar step and the internal part are an interesting and uncommon example of polychrome painted terracotta. The provenance of the glazed Arcevia altarpiece is not clear yet: some historians hypothesize a local manufacture of Fra Mattia and some others a Roman or Florentine production. The remaining parts of Ripatransone altarpiece are partially glazed and partially not coated perhaps because they were unfinished and not yet painted. Clay body samples collected from the above mentioned altarpieces were investigated using different analytical techniques (OM, XRD, XRF, PIXE) to point out differences in chemical and mineralogical composition and to determine if the altarpieces were made by using local raw clay materials or other clays from Tuscany or Campania as in the Della Robbia previous production. A comparison has also been

  15. Immunological aspects of biopsy-proven lupus nephritis in Bahraini patients with systemic lupus erythematosus.

    PubMed

    Farid, Eman M; Hassan, Adla B; Abalkhail, Ali A; El-Agroudy, Amgad E; Arrayed, Sameer Al-M; Al-Ghareeb, Sumaya M

    2013-11-01

    Lupus nephritis (LN) is a frequent and potentially serious complication of systemic lupus erythematosus (SLE) that may influence morbidity and mortality. Immunological investigations are aiding tools to the kidney biopsy findings in early diagnosis, in addition to monitoring the effect of therapy. The aim of the present study is to highlight the role of these investigations in a group of Bahraini patients and to determine whether there is any positive association between these findings and the outcome of LN. The current study is a retrospective case-control study of randomly selected 88 SLE patients, 44 with biopsy-proven LN and 44 without, acting as controls. All renal biopsies performed during the period from 1996 to 2012 were classified according to the World Health Organization classification. Immunological investigations analyzed are: Antinuclear antibodies (ANA), anti-ds DNA, anti-ENA, anti-cardiolipin antibodies (abs) and complement components C3, C4. Human leukocyte antigen (HLA) typing class II was performed on selected cases. All patients had positive ANA (100%). A significantly high frequency of anti-Smith abs among the non-LN group (43.18%) compared with the LN group (18.18%) was found (P <0.001). On the other hand, the anti-Ro/SSA abs in the non-LN group was also found at a statistically higher frequency (20.45%) compared with that in the LN group (4.54%) (P <0.01). Anti-ds-DNA abs were found to be higher in the LN group (84.09%) compared with the non-LN group (70.45%), but the difference was not statistically significant (P = 0.082). There was a positive association of ANA positivity and low C3 and or C4 in the studied group. In our study, 88.2% of the HLA typed patients had HLADR2, DR3 or both. In conclusion, in our Arabic Bahraini SLE patients, the presence of anti-Smith, anti-Ro/SSA and anti-RNP antibodies and the absence of anti-dsDNA antibodies are independent predictive markers for renal involvement. However, more prospective studies with a

  16. Variations in the provenance of the late Neogene Red Clay deposits in northern China

    NASA Astrophysics Data System (ADS)

    Shang, Yuan; Beets, Christiaan J.; Tang, Hui; Prins, Maarten A.; Lahaye, Yann; van Elsas, Roel; Sukselainen, Leena; Kaakinen, Anu

    2016-04-01

    The voluminous loess-Red Clay deposits in northern China forming part of the Chinese Loess Plateau (CLP) are valuable terrestrial archives of climatic evolution for the late Cenozoic Era. Fundamental in reconstructing the late Miocene and Pliocene wind patterns and aridification history is a detailed knowledge of the provenance of these deposits. This paper provides end member modelling of bulk grain-size distributions and U-Pb dating of detrital zircons for three distant Red Clay sequences in the northeastern (Baode), southern (Lantian) and western (Dongwan) CLP. Data show that these different sections each display a distinctive compositional structure indicating variable depositional processes, but they also share two significant zircon age populations of 200-300 Ma and 400-500 Ma. While the Permian-Triassic (200-300 Ma) group accounts for a larger proportion of zircons' ages in the northeastern (NE) CLP, the Ordovician-Silurian (400-500 Ma) component is dominant in the southern and western CLP. It is suggested that the Red Clay in the southern and western CLP was mainly derived from the Northern Tibetan Plateau (NTP) and the Taklimakan desert by low-level westerly winds. Samples of the NE CLP show an increased signature of sediments transported by near-surface northwesterly winds from the broad area of the Central Asian Orogen Belt (CAOB). This spatial transport and deposition pattern is supported by the results from the backtrace trajectory modelling of the dominant dust transport pathways in the CLP. It is noted that the Red Clay sample of around 3.6 Ma obtained from the NE CLP shows increased detrital contributions from its west, possibly indicating an intensified westerly wind strength and/or aridity of the NTP and Taklimakan desert due to the uplift of the Tibetan Plateau and Tianshan Mountains in the Pliocene. The onset of enhanced drainage of the Yellow River caused by the increased denudation of the NETP since 3.6 Ma could also have contributed to this.

  17. Towards a strontium isoscape for the determination of provenance of prehistoric wooden findings

    NASA Astrophysics Data System (ADS)

    Horsky, Monika; Tintner, Johannes; Bolka, Monika; Grabner, Michael; Kowarik, Kerstin; Reschreiter, Hans; Kern, Anton; Horacek, Micha; Prohaska, Thomas

    2014-05-01

    Prehistoric wood artefacts have been excavated from ancient salt mine galleries in Hallstatt, Austria. These findings present a unique archive of information on Bronze and Iron Age mining and trade relations, as for certain tools a production elsewhere and transport to the mine is assumed. These wooden artefacts contain the geochemical information of their growth location, though masked by secondary salts due to the storage conditions. Consequently, the analysis of the biogenic 87Sr/86Sr isotope ratios of the findings was carried out in comparison to the respective signatures of trees from possible regions of origin, in order to draw conclusions on prehistoric trade routes. Thus - in addition to Hallstatt - seven regions in the Alpine region of Austria as well as in the Northern and Southern lowlands were selected based on known settlements in the time period of interest. Within all regions, the geological bedrock variability was considered for the definition of sampling spots, which resulted in a total of 26 locations. Four tree species represented in the archaeological finds (i.e. Picea abies, Abies alba, Fagus sylvatica and Quercus sp.) were sampled upon availability. Wood sample digests from eight replicate trees per location were analysed using multicollector-inductively coupled plasma-mass spectrometry (MC-ICP-MS). In order to reveal the biogenic signatures of the prehistoric findings, a decontamination method based on acid leaching was developed. We could successfully separate biogenic from secondary Sr and adopted a mixing theory to account for possibly incomplete removal of the latter. The Sr isotope ratio data obtained from modern trees (i.e. bioavailable Sr) reflect the geological heterogeneity of the Alps, which challenges the creation of an isoscape and its applicability to distinct provenance determination. Different geologic bedrock types can be clearly distinguished by their 87Sr/86Sr, e.g. marine sedimentary and igneous rocks. Furthermore, the data

  18. Epidemiology of Histologically Proven Glomerulonephritis in Africa: A Systematic Review and Meta-Analysis

    PubMed Central

    Okpechi, Ikechi G.; Ameh, Oluwatoyin I.; Bello, Aminu K.; Ronco, Pierre; Swanepoel, Charles R.; Kengne, Andre P.

    2016-01-01

    Background and aim Glomerulonephritis (GN) is a leading cause of end-stage renal disease (ESRD) in Africa. Data on epidemiology and outcomes of glomerular diseases from Africa is still limited. We conducted a systematic review on the epidemiology of histologically proven glomerular diseases in Africa between 1980 and 2014. Materials and methods We searched literature using PubMed, AfricaWide, the Cumulative Index to Nursing and Allied Health Literature on EBSCO Host, Scopus, African Journals online databases, and the African Index Medicus, for relevant studies. The review was conducted using standard methods and frameworks using only biopsy-confirmed data. Results Twenty four (24) studies comprising 12,093 reported biopsies from 13 countries were included in this analysis. The median number of biopsies per study was 127.0 (50–4436), most of the studies (70.0%) originated from North Africa and the number of performed kidney biopsies varied from 5.2 to 617 biopsies/year. Nephrotic syndrome was the commonest indication of renal biopsy. The frequency of reported primary pathologic patterns included, minimal change disease (MCD); 16.5% (95%CI: 11.2–22.6), focal segmental glomerulosclerosis (FSGS); 15.9% (11.3–21.1), mesangiocapillary GN (MCGN); 11.8% (9.2–14.6), crescentic GN; 2.0% (0.9–3.5) and IgA nephropathy 2.8% (1.3–4.9). Glomerular diseases related to hepatitis B and systemic lupus erythematosus had the highest prevalence among assessed secondary diseases: 8.4% (2.0–18.4) and 7.7% (4.5–11.7) respectively. There was no evidence of publication bias and regional differences were seen mostly for secondary GNs. Conclusions Glomerular diseases remain poorly characterized in sub-Saharan Africa due to declining renal biopsy rates and consequent paucity of data on pathologic patterns of key renal diseases. Development of renal biopsy registries in Africa is likely to enable adequate characterization of the prevalence and patterns of glomerular diseases

  19. ESIP's Emerging Provenance and Context Content Standard Use Cases: Developing Examples and Models for Data Stewardship

    NASA Astrophysics Data System (ADS)

    Ramdeen, S.; Hills, D. J.

    2013-12-01

    Earth science data collections range from individual researchers' private collections to large-scale data warehouses, from computer-generated data to field or lab based observations. These collections require stewardship. Fundamentally, stewardship ensures long term preservation and the provision of access to the user community. In particular, stewardship includes capturing appropriate metadata and documentation--and thus the context of the data's creation and any changes they underwent over time --to enable data reuse. But scientists and science data managers must translate these ideas into practice. How does one balance the needs of current and (projected) future stakeholders? In 2011, the Data Stewardship Committee (DSC) of the Federation of Earth Science Information Partners (ESIP) began developing the Provenance and Context Content Standard (PCCS). As an emerging standard, PCCS provides a framework for 'what' must be captured or preserved as opposed to describing only 'how' it should be done. Originally based on the experiences of NASA and NOAA researchers within ESIP, the standard currently provides data managers with content items aligned to eight key categories. While the categories and content items are based on data life cycles of remote sensing missions, they can be generalized to cover a broader set of activities, for example, preservation of physical objects. These categories will include the information needed to ensure the long-term understandability and usability of earth science data products. In addition to the PCCS, the DSC is developing a series of use cases based on the perspectives of the data archiver, data user, and the data consumer that will connect theory and practice. These cases will act as specifications for developing PCCS-based systems. They will also provide for examination of the categories and content items covered in the PCCS to determine if any additions are needed to cover the various use cases, and also provide rationale and

  20. Growth potential limits drought morphological plasticity in seedlings from six Eucalyptus provenances.

    PubMed

    Maseda, Pablo H; Fernández, Roberto J

    2016-02-01

    Water stress modifies plant above- vs belowground biomass allocation, i.e., morphological plasticity. It is known that all species and genotypes reduce their growth rate in response to stress, but in the case of water stress it is unclear whether the magnitude of such reduction is linked to the genotype's growth potential, and whether the reduction can be largely attributed to morphological adjustments such as plant allocation and leaf and root anatomy. We subjected seedlings of six seed sources, three from each of Eucalyptus camaldulensis (potentially fast growing) and E. globulus (inherently slow growing), to three experimental water regimes. Biomass, leaf area and root length were measured in a 6-month glasshouse experiment. We then performed functional growth analysis of relative growth rate (RGR), and aboveground (leaf area ratio (LAR), specific leaf area (SLA) and leaf mass ratio (LMR)) and belowground (root length ratio (RLR), specific root length (SRL) and root mass ratio (RMR)) morphological components. Total biomass, root biomass and leaf area were reduced for all Eucalyptus provenances according to drought intensity. All populations exhibited drought plasticity, while those of greater growth potential (RGRmax) had a larger reduction in growth (discounting the effect of size). A positive correlation was observed between drought sensitivity and RGRmax. Aboveground, drought reduced LAR and LMR; under severe drought a negative correlation was found between LMR and RGRmax. Belowground, drought reduced SRL but increased RMR, resulting in no change in RLR. Under severe drought, a negative correlation was found between RLR, SRL and RGRmax. Our evidence strongly supports the classic ecophysiological trade-off between growth potential and drought tolerance for woody seedlings. It also suggests that slow growers would have a low capacity to adjust their morphology. For shoots, this constraint on plasticity was best observed in partition (i.e., LMR) whereas for

  1. Managing Data, Provenance and Chaos through Standardization and Automation at the Georgia Coastal Ecosystems LTER Site

    NASA Astrophysics Data System (ADS)

    Sheldon, W.

    2013-12-01

    lifecycle, from initial import through quality control, revision and integration by our data processing system (GCE Data Toolbox for MATLAB), and included in metadata for versioned data products. This high level of automation and system integration has proven very effective in managing the chaos and scalability of our information management program.

  2. Subduction Complex Provenance redefined: modern sands from the Indo-Burman-Andaman-Nicobar Ridge and Barbados Island

    NASA Astrophysics Data System (ADS)

    Limonta, Mara; Resentini, Alberto; Andò, Sergio; Vezzoli, Giovanni; Bandopadhyay, Pinaki C.; Najman, Yani; Boni, Maria; Bechstädt, Thilo; Garzanti, Eduardo

    2013-04-01

    Subduction complexes large enough to be exposed subaerially and to become significant sources of terrigenous detritus are formed by tectonic accretion above trenches choked with thick sections of remnant-ocean turbidites. They thus need to be connected along strike to a large Alpine-type or Andean-type orogen, where huge volumes of orogenic detritus are produced and conveyed via a major fluvio-deltaic system to the deep sea (Ingersoll et al., 2003). We investigated sediment generation and recycling in the Indo-Burman-Andaman-Nicobar subduction complex, representing the archetype of such settings in the eastern prolongation of the Himalayan collisional system. "Subduction Complex Provenance" is composite, and chiefly consists of detritus recycled from largely turbiditic parent rocks (Recycled Clastic Provenance), with local supply from ultramafic and mafic rocks of forearc lithosphere (Ophiolite Provenance) or recycled paleovolcanic to neovolcanic sources (Volcanic Arc Provenance; Garzanti et al., 2007). In order to specifically investigate the effect of recycling, we characterized the diverse detrital signatures of Cenozoic sandstones deposited during subsequent stages of "soft" and "hard" Himalayan collision and exposed from Bangladesh to the Andaman Islands, and discuss the reasons for compositional discrepancies between parent sandstones and their recycled daughter sands. A companion study was carried out with the same methodologies, rationale and goals on Barbados Island, one of the few other places where a large accretionary prism is subaerially exposed. Also modern Barbados sands are largely multicyclic, reflecting mixing in various proportions of detritus from the basal Scotland Formation (sandstones and mudrocks), their stratigraphic and tectonic cover, the Oceanic Formation (quartzose turbidites and deep-water biogenic oozes including radiolarite), and from the Pleistocene calcarenite and reefal cap, as well as from volcanic layers ultimately derived from

  3. Quantitative mineralogy of the Yukon River system: Changes with reach and season, and determining sediment provenance

    USGS Publications Warehouse

    Eberl, D.D.

    2004-01-01

    mineral dissolution during transport between Eagle and Pilot Station, a distance of over 2000 km. We estimate that approximately 3 wt% of the quartz, 15 wt% of the feldspar (1 wt% of the alkali and 25 wt% of the plagioclase), and 26 wt% of the carbonates (31 wt% of the calcite and 15 wt% of the dolomite) carried by the river dissolve in this reach. The mineralogies of the suspended sediments change with the season. For example, during the summer of 2002 the quartz content varied by 20 wt%, with a minimum in mid-summer. The calcite content varied by a similar amount, and had a maximum corresponding to the quartz minimum. These modes are related to the relative amount of sediment flowing from the White River system, which is relatively poor in quartz, but rich in carbonate minerals. Suspended total clay minerals varied by as much as 25 wt%, with maxima in mid July, and suspended feldspar varied up to 10 wt%. Suspended sediment data from the summers of 2001 and 2003 support the 2002 trends. A calculation technique was developed to determine theproportion of various sediment sources in a mixed sediment by unmixing its quantitative mineralogy. Results from this method indicate that at least three sediment sources can be identified quantitatively with good accuracy. With this technique, sediment mineralogies can be used to calculate the relative flux of sediment from different tributaries, thereby identifying sediment provenance.

  4. Provenance and Diagenesis of the Yellowknife Bay Formation, Gale Crater, Mars (Invited)

    NASA Astrophysics Data System (ADS)

    Hurowitz, J.; McLennan, S. M.; Ehlmann, B. L.; Grotzinger, J. P.; Milliken, R.; Schmidt, M. E.; Team, M.

    2013-12-01

    took place under rock-dominated conditions following deposition; accordingly, an arid, cold, and/or high relief provenance with minimal chemical weathering is indicated. Sedimentary rocks of the YBF preserve a remarkable diversity of diagenetic textural features. These features can be roughly subdivided into at least two phases of activity: (1) formation of early concretions, voids, and internally banded ridges, potentially associated with a set of redox reactions that may have produced gases of, as yet, unknown character, and (2) later precipitation of Ca-sulfate (anhydrite, bassanite, and perhaps gypsum) in veins and in early diagenetic voids that are cross-cut by veins. In summary, Curiosity has found evidence for a fluvio-lacustrine environment characterized by circum-neutral pH fluids that were conducive to the formation of clay minerals and mixed-valence Fe-oxides, and the strata also record a protracted history of post-depositional diagenetic reactions. Together, these observations indicate that Gale Crater played host to a habitable environment that could have supported chemolithoautotrophy.

  5. Provenance of sedimentary kaolin deposits in Egypt: Evidences from the Pb, Sr and Nd isotopes

    NASA Astrophysics Data System (ADS)

    Baioumy, Hassan

    2014-12-01

    This work reports, for the first time, the Pb, Sr and Nd isotopes of the clay fractions (<2 μm) from sedimentary kaolin deposits in Egypt of different ages (Carboniferous and lower Cretaceous), localities (Sinai, Red Sea and Aswan), lithologies (flint and plastic) and clay minerals composition (pure kaolinite and mixture of kaolinite, illite and chlorite) to determine their source area compositions and examine the effect of provenance on their isotopic compositions. Measured (present day) and age-corrected Pb isotopes data (100 and 300 My for the Cretaceous and Carboniferous deposits, respectively) are more or less homogeneous in all deposits regardless of their ages, localities, and compositions. This, therefore, suggests that the Pb isotopes cannot be used as a tracer for source area compositions of these kaolin deposits. On the other hand, the studied kaolin deposits show variations in their measured and age-corrected Sr and Nd isotopes regarding to their ages and compositions. The Carboniferous illite-rich kaolin deposits in the Khaboba and Hasbar areas, Sinai have higher measured and age-corrected 87Sr/86Sr ratios (average of 0.715742 and 0.711156 for measured and age-corrected, respectively) compared to the non-illitic Carboniferous deposit at Abu Natash area (average of 0.70772 and 0.70769 for measured and age-corrected, respectively) and the lower Cretaceous deposits in all areas (average of 0.70827 and 0.70821 for measured and age-corrected, respectively). The Carboniferous kaolin deposits in the Khaboba and Hasbar areas also have lower 143Nd/144Nd ratios (average of 0.51206 and 0.51180 for measured and age-corrected, respectively) compared to the Carboniferous Abu Natash deposit (average of 0.51253 and 0.51231 for measured and age-corrected, respectively) as well as the lower Cretaceous deposits in all areas (average of 0.51248 and 0.51239 for measured and age-corrected, respectively). Initial εNd values are negative in the Carboniferous kaolin deposits

  6. Nuclear Thermal Propulsion (NTP): A Proven, Growth Technology for Fast Transit Human Missions to Mars

    NASA Technical Reports Server (NTRS)

    Borowski, Stanley K.; McCurdy, David R.; Packard, Thomas W.

    2014-01-01

    The "fast conjunction" long surface stay mission option was selected for NASA's recent Mars Design Reference Architecture (DRA) 5.0 study because it provided adequate time at Mars (approx. 540 days) for the crew to explore the planet's geological diversity while also reducing the "1-way" transit times to and from Mars to approx. 6 months. Short transit times are desirable in order to reduce the debilitating physiological effects on the human body that can result from prolonged exposure to the zero-gravity (0-gE) and radiation environments of space. Recent measurements from the RAD detector attached to the Curiosity rover indicate that astronauts would receive a radiation dose of approx. 0.66 Sv (approx. 66 rem)-the limiting value established by NASA-during their 1-year journey in deep space. Proven nuclear thermal rocket (NTR) technology, with its high thrust and high specific impulse (Isp approx. 900 s), can cut 1-way transit times by as much as 50 percent by increasing the propellant capacity of the Mars transfer vehicle (MTV). No large technology scale-ups in engine size are required for these short transit missions either since the smallest engine tested during the Rover program-the 25 klbf "Pewee" engine is sufficient when used in a clustered arrangement of three to four engines. The "Copernicus" crewed MTV developed for DRA 5.0 is a 0-gE design consisting of three basic components: (1) the NTP stage (NTPS); (2) the crewed payload element; and (3) an integrated "saddle truss" and LH2 propellant drop tank assembly that connects the two elements. With a propellant capacity of approx. 190 t, Copernicus can support 1-way transit times ranging from approx. 150 to 220 days over the 15-year synodic cycle. The paper examines the impact on vehicle design of decreasing transit times for the 2033 mission opportunity. With a fourth "upgraded" SLS/HLV launch, an "in-line" LH2 tank element can be added to Copernicus allowing 1-way transit times of 130 days. To achieve 100

  7. Geochemical proxies for weathering and provenance of Late Quaternary alluvial core-sediments from NW India

    NASA Astrophysics Data System (ADS)

    Singh, Ajit; Amir, Mohd; Paul, Debajyoti; Sinha, Rajiv

    2014-05-01

    characterized by more radiogenic Sr and less radiogenic Nd. Whereas those deposited during MIS-1 and MIS-3, warm and humid Interglacial periods, are distinctly less radiogenic in Sr and more radiogenic in Nd (Higher Himalayan signature) suggesting increased contribution from the Higher Himalayan rocks. These variations can be attributed to decreased contribution from the Higher Himalaya during Glacial periods due to increased glacial cover over the Higher Himalaya which in turn are caused by lower solar insolation and vice versa. The findings of this study, consistent with those from the Ganga-Yamuna interfluve sediments (Rahaman et al., 2009), indicate a dominant control of climate on sediment provenance and source weathering. References: Sinha et al. (2013), Quaternary International, 308-309, 66-75. Singh et al. (2011), AGU Fall Meeting 5-9 December 2011. Rahaman et al. (2009), Geology, 37, 559-526.

  8. Insight of dust provenance in Antarctic ice cores prior to M.I.S. 6 from ice magnetization

    NASA Astrophysics Data System (ADS)

    Lanci, L.; Delmonte, B.

    2014-12-01

    The identification of dust provenance and its characteristics is a key issue to understand climate, atmospheric and environmental changes, and provides key constraints to dust transport processes. Many traditional geochemical methods for dust source tracking are not relevant in Antarctic ice cores because of their extremely low dust content, spanning from a few ppb during warm interglacial periods to a few hundreds of ppb, in the case of relatively dustier glacial periods. For the same reason, the Sr-Nd-Pb radiogenic isotope composition of mineral dust in ice cores, that is the most widely-used technique for dust source fingerprint has intrinsic limitations related to dust abundance that drastically limit the temporal information one can achieve. Rock-magnetic properties of aerosol dust, instead, can be measured directly in small ice samples despite its very low concentration. Intensity of isothermal remanent magnetization and coercivity of magnetic minerals are directly related to that of insoluble dust and these magnetic properties are informative of the dust provenance areas. We investigated rock-magnetic properties of aerosol dust in Antartic ice older than M.I.S. 6 in EPiCA Dome-C and Vostok ice core to gather information on dust provenance prior to the last interglacial times. New and previously published results from rock-magnetism suggests that aerosol dust provenance has changed in time during subsequent glacial-interglacial climatic stages. Moreover parallel changes in Dome-C and Vostok sites suggest that such changes result from long-distance dust transportation implying that transportation paths and/or dust sources did not remained the same during the last few glacial-interglacial cycles.

  9. Ion Beam Analysis for the provenance attribution of lapis lazuli used in glyptic art: The case of the "Collezione Medicea"

    NASA Astrophysics Data System (ADS)

    Re, Alessandro; Angelici, Debora; Lo Giudice, Alessandro; Corsi, Jacopo; Allegretti, Silvia; Biondi, Alessia Fabiola; Gariani, Gianluca; Calusi, Silvia; Gelli, Nicla; Giuntini, Lorenzo; Massi, Mirko; Taccetti, Francesco; La Torre, Leonardo; Rigato, Valentino; Pratesi, Giovanni

    2015-04-01

    The first part of this study reports on the wide campaign for the extension of the database of both trace and minor elements concentration in diopside by means of μ-PIXE measurements and of luminescence spectra in diopside and wollastonite by means of μ-IL measurements. Diopside and wollastonite are actually two of the most common lapis lazuli-forming minerals. For this former part of the study, we analysed rocks of known provenance at the microbeam line of the LNL laboratories in Legnaro (PD) of the Istituto Nazionale di Fisica Nucleare (INFN). The latter part of the paper is dedicated to the non-invasive Ion Beam Analyses (IBA) characterisation of six pieces of the "Collezione Medicea". The collection is exhibited at the Museum of Natural History (University of Firenze) and belonged to the Medici family. It includes artworks made of lapis lazuli manufactured in the 16th and 17th centuries but there is not precise information about the provenance of the used raw material. Results on the artworks show, as expected, that the Chilean provenance of the material used for the analysed artworks has to be excluded. Lapis lazuli used for five of the analysed artworks can be ascribed to the Afghan quarry district, while one object cannot be attributed only on the base of diopside and wollastonite analysis.

  10. New markers to identify the provenance of lapis lazuli: trace elements in pyrite by means of micro-PIXE

    NASA Astrophysics Data System (ADS)

    Re, A.; Angelici, D.; Lo Giudice, A.; Maupas, E.; Giuntini, L.; Calusi, S.; Gelli, N.; Massi, M.; Borghi, A.; Gallo, L. M.; Pratesi, G.; Mandò, P. A.

    2013-04-01

    Lapis lazuli has been used for glyptics and carving since the fifth millennium BC to produce jewels, amulets, seals, inlays, etc; the identification of the origin of the stone used for carving artworks may be valuable for reconstructing old trade routes. Since ancient lapis lazuli art objects are precious, only non-destructive techniques can be used to identify their provenance, and ion beam analysis (IBA) techniques allow us to characterise this stone in a fully non-invasive way. In addition, by using an ion microprobe, we have been able to focus the analysis on single crystals, as their typical dimensions may range from a few microns to hundreds of microns. Provenance markers, identified in previous IBA studies and already presented elsewhere, were based on the presence/absence of mineral phases, on the presence/quantity of trace elements inside a phase and on characteristic features of the luminescence spectra. In this work, a systematic study on pyrite crystals, a common accessory mineral in lapis lazuli, was carried out, following a multi-technique approach: optical microscopy and SEM-EDX to select crystals for successive trace element micro-PIXE measurements at two Italian facilities, the INFN Laboratori Nazionali di Legnaro and the INFN LABEC laboratory in Firenze. The results of this work allowed us to obtain new markers for lapis lazuli provenance identification.

  11. Analysis of Provenance of Siwalik Group in Western Nepal Himalaya Using Petrography and U-Pb Geochronology

    NASA Astrophysics Data System (ADS)

    Baral, U.; Lin, D.; Chamlagain, D.

    2014-12-01

    The east-west trending southernmost litho-tectonic unit, Siwalik, is about 5 Km thick fluvial coarsening upward sequence, which was deposited during middle Miocene to early Pleistocene. This fluvial sediment is excellent archives of the Himalayan exhumation, tectonic events and mountain building processes. This paper deals with the possible provenance of the middle Miocene to early Pleistocene fluvial sediments along the Karnali River section as well as added some knowledge of the Himalayan orogeny by the means of petrography and detrital zircon U-Pb dating under LA-ICP-MS. The petrographic studies shows the detritus grain of sandstones from the Karnali River section falls on 'recycled orogeny' field on QFL plots. The detrital zircon U-Pb geochronological study shows that the sediments were mostly derived from entire three litho units ;Tethys, Higher, and Lesser Himalaya during the time of deposition of Siwalik whereas the erosion process of Lesser Himalayan sediment increased after ~10 Ma. Overall, the combined studies show the mixed type of provenance as seen in the western Himalaya of India. Key words: U-Pb geochronology, Provenance, Siwalik Group

  12. Characterization of lapis lazuli and corresponding purified pigments for a provenance study of ultramarine pigments used in works of art.

    PubMed

    Favaro, M; Guastoni, A; Marini, F; Bianchin, S; Gambirasi, A

    2012-02-01

    In this paper, we propose an analytical methodology for attributing provenance to natural lapis lazuli pigments employed in works of art, and for distinguishing whether they are of natural or synthetic origin. A multitechnique characterization of lazurite and accessory phases in lapis lazuli stones from Afghan, Siberian and Chilean quarries, on the pigments obtained by their purification, and on synthetic ultramarine pigments was performed. According to the results obtained, infrared spectroscopy is not a suitable technique for distinguishing the provenance of lapis lazuli, but a particular absorbance band makes it relatively easy to determine whether it is of natural or synthetic origin. On the other hand, EDS elemental composition and XRD patterns show the presence of specific mineral phases associated with specific lapis lazuli sources, and can be used to distinguish the provenance of the stones as well as-albeit to a lesser extent-the corresponding purified blue pigments. In contrast, FEG-SEM observations clearly show different stone textures depending on their provenance, although these distinctive features do not persist in the corresponding pigments. PCA analyses of EDS data allow Afghan lapis lazuli stone to be distinguished from Chilean and Siberian ones, and can distinguish between the pigments resulting from their purification as well as synthetic blue ones. Although this methodology was developed using a limited number of samples, it was tested on lapis lazuli pigments collected from three paintings (from the fourteenth to sixteenth centuries) in order to perform a preliminary validation of the technique, and based on the results, the provenance of the blue pigments employed in those artworks is proposed. Finally, upon analytically monitoring the process of purifying lapis lazuli to obtain the corresponding pigments, it was found that ion-exchange reactions occur between the alkali modifiers of silicate/aluminosilicate phases and free carboxylic acids

  13. Characterization of lapis lazuli and corresponding purified pigments for a provenance study of ultramarine pigments used in works of art.

    PubMed

    Favaro, M; Guastoni, A; Marini, F; Bianchin, S; Gambirasi, A

    2012-02-01

    In this paper, we propose an analytical methodology for attributing provenance to natural lapis lazuli pigments employed in works of art, and for distinguishing whether they are of natural or synthetic origin. A multitechnique characterization of lazurite and accessory phases in lapis lazuli stones from Afghan, Siberian and Chilean quarries, on the pigments obtained by their purification, and on synthetic ultramarine pigments was performed. According to the results obtained, infrared spectroscopy is not a suitable technique for distinguishing the provenance of lapis lazuli, but a particular absorbance band makes it relatively easy to determine whether it is of natural or synthetic origin. On the other hand, EDS elemental composition and XRD patterns show the presence of specific mineral phases associated with specific lapis lazuli sources, and can be used to distinguish the provenance of the stones as well as-albeit to a lesser extent-the corresponding purified blue pigments. In contrast, FEG-SEM observations clearly show different stone textures depending on their provenance, although these distinctive features do not persist in the corresponding pigments. PCA analyses of EDS data allow Afghan lapis lazuli stone to be distinguished from Chilean and Siberian ones, and can distinguish between the pigments resulting from their purification as well as synthetic blue ones. Although this methodology was developed using a limited number of samples, it was tested on lapis lazuli pigments collected from three paintings (from the fourteenth to sixteenth centuries) in order to perform a preliminary validation of the technique, and based on the results, the provenance of the blue pigments employed in those artworks is proposed. Finally, upon analytically monitoring the process of purifying lapis lazuli to obtain the corresponding pigments, it was found that ion-exchange reactions occur between the alkali modifiers of silicate/aluminosilicate phases and free carboxylic acids

  14. Climate-related Indicators and Data Provenance: Evaluating Coupled Boundary Objects for Science, Innovation, and Decision-Making

    NASA Astrophysics Data System (ADS)

    Wiggins, A.; Young, A.; Brody, C.; Gerst, M.; Kenney, M. A.; Lamoureux, A.; Rice, A.; Wolfinger, F.

    2015-12-01

    Boundary object theory focuses on the role of artifacts, such as indicator images, in translation and communication across the boundaries of social groups. We use this framework for understanding how data can communicate across contexts to answer the question: Can coupling climate-related indicators with data provenance support scientific innovation and science translation? To address this question we conducted a study to understand the features and capabilities necessary for indicators and data provenance for scientific uses, using the recently online-released U.S. Global Change Research Program (USGCRP) Indicators and Global Change Information System (GCIS) as linked boundary objects. We conducted semi-structured interviews with professional researchers in which we asked the researchers to explore and describe what they observed that was useful or frustrating for a subset of the USGCRP Indicators, related GCIS content, and other similar indicator and metadata websites. Participants found these sites' navigation and the labeling and description of their assets frustrating and confusing, but were able to clearly articulate the metadata and provenance information they needed to both understand and trust the indicators. In addition to identifying desired features that are likely to be specific to this audience (e.g., references or citations for indicators), scientists wanted clear, easier-to-access provenance information of the type usually recommended for documenting research data. Notably, they felt the information would be best presented in a fashion accessible to a broader audience, as those with more technical expertise should be able to infer additional contextual details given the provenance information that they had identified as key. Such results are useful for the improvement of indicator systems, such as the prototype released by USGCRP. We note in particular that the consistency of responses across the multi-disciplinary sample, which included scholars in

  15. Leapfrogging of tree species provenances? Interaction of microclimate and genetics on upward shifts in tree species' range limits

    NASA Astrophysics Data System (ADS)

    Reinhardt, K.; Castanha, C.; Germino, M. J.; Kueppers, L. M.

    2011-12-01

    The elevation limit of tree growth (alpine treeline) is considered to be constrained by environmental (i.e., thermal) and genetic (i.e., inability to adapt to climatic conditions) limitations to growth. Warming conditions due to climate change are predicted to cause upward shifts in the elevation of alpine treelines, through relief of cold-induced physiological limitations on seedling recruitment beyond current treeline boundaries. To determine how genetics and climate may interact to affect seedling establishment, we transplanted recently germinated seedlings from high- and low-elevation provenances (HI and LO, respectively) of Pinus flexilis in common gardens arrayed along an elevation and canopy gradient from subalpine forest into the alpine zone at Niwot Ridge, CO. We compared differences in microclimate and seedling ecophysiology among sites and between provenances. During the first summer of growth, frequently cloudy skies resulted in similar solar radiation incidence and air and soil temperatures among sites, despite nearly a 500 m-span in elevation across all sites. Preliminary findings suggest that survival of seedlings was similar between the lowest and highest elevations, with greater survival of LO (60%) compared to HI (40%) seedlings at each of these sites. Photosynthesis, carbon balance (photosynthesis/respiration), and conductance increased more than 2X with elevation for both provenances, and were 35-77% greater in LO seedlings compared to HI seedlings. There were no differences in dark-adapted chlorophyll fluorescence (Fv/Fm) among sites or between provenances. However, in a common-garden study at low elevation, we observed no differences in carbon or water relations between two naturally-germinated mitochondrial haplotypes of P. flexilis (of narrow and wide-ranging distributions). We did observe water-related thresholds on seedling carbon balance and survival that occurred when soil volumetric water content dropped below 10% and seedling water

  16. Survival, growth, and juvenile-mature correlations in a West Virginia sugar maple provenance test 25 years after establishment. Forest Service research paper (Final)

    SciTech Connect

    Schuler, T.M.

    1994-08-17

    Survival, total height, diameter at breast height (d.b.h.), and stem quality of sugar maple trees of different provenances were compared 25 years after establishment in north-central West Virginia. Provenances were from Michigan, Minnesota, West Virginia, Massachusetts, New Hampshire, Vermont, Maine, and Quebec, Canada. There were significant differences between provenances for all traits except stem quality. By provenance, total tree height ranged from about 49 to 37 feet; d.b.h. from 6.7 to 3.6 inches; and survival from 100 to 15 percent. The predictability of total tree height 25 years after establishment based on mean provenance height at age 2, 6, 10, and 15 years is discussed.

  17. Interoperability Using Lightweight Metadata Standards: Service & Data Casting, OpenSearch, OPM Provenance, and Shared SciFlo Workflows

    NASA Astrophysics Data System (ADS)

    Wilson, B. D.; Manipon, G.; Hua, H.; Fetzer, E.

    2011-12-01

    Under several NASA grants, we are generating multi-sensor merged atmospheric datasets to enable the detection of instrument biases and studies of climate trends over decades of data. For example, under a NASA MEASURES grant we are producing a water vapor climatology from the A-Train instruments, stratified by the Cloudsat cloud classification for each geophysical scene. The generation and proper use of such multi-sensor climate data records (CDR's) requires a high level of openness, transparency, and traceability. To make the datasets self-documenting and provide access to full metadata and traceability, we have implemented a set of capabilities and services using known, interoperable protocols. These protocols include OpenSearch, OPeNDAP, Open Provenance Model, service & data casting technologies using Atom feeds, and REST-callable analysis workflows implemented as SciFlo (XML) documents. We advocate that our approach can serve as a blueprint for how to openly "document and serve" complex, multi-sensor CDR's with full traceability. The capabilities and services provided include: - Discovery of the collections by keyword search, exposed using OpenSearch protocol; - Space/time query across the CDR's granules and all of the input datasets via OpenSearch; - User-level configuration of the production workflows so that scientists can select additional physical variables from the A-Train to add to the next iteration of the merged datasets; - Efficient data merging using on-the-fly OPeNDAP variable slicing & spatial subsetting of data out of input netCDF and HDF files (without moving the entire files); - Self-documenting CDR's published in a highly usable netCDF4 format with groups used to organize the variables, CF-style attributes for each variable, numeric array compression, & links to OPM provenance; - Recording of processing provenance and data lineage into a query-able provenance trail in Open Provenance Model (OPM) format, auto-captured by the workflow engine

  18. Black and red granites in the Egyptian Antiquity Museum of Turin. A minero-petrographic and provenance study.

    NASA Astrophysics Data System (ADS)

    Serra, M.; Borghi, A.; Vaggelli, G.; D'Amicone, E.; Vigna, L.

    2009-04-01

    The University of Turin, in cooperation with the Egyptian Antiquity Museum, has recently undertaken several projects aimed at developing a scientific approach to the analysis of ancient Egyptian finds. In particular, a straightforward project to investigate the stony handcrafts preserved in the statuary rooms started in 2006 to obtain their systematic petrographic classification and their possible geological sources. The main intent of the project was to understand the provenance of the materials used in Pharaonic period, setting the base for the identification of the ancient quarry sites and for a correct interpretation of the extraction and working techniques, in order to provide fundamental information about economical and social development of Egyptian civilization through historical times. The choice to focus attention on black and red granites came from the statement of the percentage relevance (40 of the 54 sculptures actually exposed) of these materials in the statuary rooms. Moreover, especially for black granites, the need of detailed minero-petrographic analysis arose from the difficulty in making a macroscopic classification of the fine-grained dark-coloured rock varieties. Therefore, five black granite statues, belonging to the Drovetti collection were sampled in a micro-invasive way: three sculptures of goddess Sekhmet (cat. 260, 251, 247), the statue of Ramses II (cat. 1380) and the statue of goddess Hathor (cat. 694). The choice to analyse even three of the twenty-one statues of goddess Sekhmet (cat. 247, cat. 251, cat. 260), originally located in the same Egyptian temple but ichnographically different, derived from the need of answering the archaeological questions about their provenance. On the other hand, the opportunity of studying the fine-grained black rocks used for the sculptures of goddess Hathor (cat. 694) and of Ramses II in Majesty (cat. 1380), symbol of the Egyptian museum of Turin, provided the opportunity to analyse and classify the

  19. Provenance analysis using Raman spectroscopy of carbonaceous material: A case study in the Southern Alps of New Zealand

    NASA Astrophysics Data System (ADS)

    Nibourel, Lukas; Herman, Frédéric; Cox, Simon; Beyssac, Olivier; Lavé, Jérôme

    2016-04-01

    Detrital provenance analyses in orogenic settings, in which sediments are collected at the outlet of a catchment, have become an important tool to estimate how erosion varies in space and time. Here we present how Raman Spectroscopy on Carbonaceous Material (RSCM) can be used for provenance analysis. RSCM provides an estimate of the peak temperature (RSCM-T) experienced during metamorphism. We show that we can infer modern erosion patterns in a catchment by combining new measurements on detrital sands with previously acquired bedrock data. We focus on the Whataroa catchment in the Southern Alps of New Zealand and exploit the metamorphic gradient that runs parallel to the main drainage direction. To account for potential sampling biases, we also quantify abrasion properties using flume experiments and measure the total organic carbon content in the bedrock that produced the collected sands. Finally, we integrate these parameters into a mass-conservative model. Our results first demonstrate that RSCM-T can be a powerful tool for detrital studies. The relative ease of data acquisition allows for a robust statistical provenance analysis with a high spatial resolution. Second, we find that spatial variations in tracer concentration and erosion intensity have a first-order control on the RSCM-T distributions, even though our flume experiments reveal that weak lithologies produce substantially more fine particles than do more durable lithologies. This result implies that sand specimens are good proxies for mapping spatial variations in erosion when the bedrock concentration of the target mineral is quantified. The modeling suggests highest present-day erosion rates (in Whataroa catchment) are not situated at the range front, as might be expected from the long-term metamorphic rock exhumation pattern, but about 10 km into the mountain belt. This closely matches the pattern of maximum rain fall and highest short-term (contemporary) inter-seismic uplift.

  20. Evaluation of leflunomide for the treatment of BK viremia and biopsy proven BK nephropathy; a single center experience

    PubMed Central

    Nesselhauf, Nicole; Strutt, Jaclyn; Bastani, Bahar

    2016-01-01

    Background: BK virus reactivation is a significant complication following renal transplantation that can result in graft failure. Reduction of immunosuppression and substitution of leflunomide for mycophenolate mofetil (MMF) has been used to treat this entity. Objectives: To evaluate the use of leflunomide in BK viremia (BKV) and biopsy proven BK nephropathy (BKN) in kidney and kidney-pancreas transplant recipients. Patients and Methods: We retrospectively reviewed 28 kidney and kidney-pancreas transplant recipients who had received leflunomide for BKV from January 2006 to November 2012. Demographics, time to BKV diagnosis, biopsy findings, rejection episodes, and laboratory data were recorded. Results: The average (mean ± SD) time to BKV from time of transplant was 316.1 ± 368.0 days (62-1708 days). At time of diagnosis, 64% of patients had their maintenance immunosuppression reduced. The indications for leflunomide administration were; BKV and biopsy proven acute rejection (BPAR) (50%), biopsy proven BKN (18%), or persistent BKV (25%). Therapeutic levels (50-100 mcg/mL) were achieved in only 54% of patients, and 60% of them had required a leflunomide dose of at least 60 mg/day. BK virus was cleared from the serum on average of 151 ± 145.2 days (17-476 days). At study commencement, 29% of patients had remained on leflunomide due to persistent BKV. Conclusions: In our study, most patients required at least a 60 mg daily dose of leflunomide to achieve therapeutic levels and to clear the virus compared to the standard 40 mg daily dose. Delaying therapy may result in progressive BKV and BKN. PMID:27047808

  1. Drought effects on hydraulic conductivity and xylem vulnerability to embolism in diverse species and provenances of Mediterranean cedars.

    PubMed

    Ladjal, Mehdi; Huc, Roland; Ducrey, Michel

    2005-09-01

    We studied hydraulic traits of young plants of the Mediterranean cedar species Cedrus atlantica (Endl.) G. Manetti ex Carrière (Luberon, France), C. brevifolia (Hook. f.) Henry (Cyprus), C. libani A. Rich (Hadeth El Jebbe, Lebanon) and C. libani (Armut Alani, Turkey). With an optimum water supply, no major differences were observed among species or provenances in either stem hydraulic conductivity (Ks) or leaf specific conductivity (Kl) measured on the main shoot. A moderate soil drought applied for 10 weeks induced marked acclimation through a reduction in Ks, particularly in the Lebanese provenance of C. libani, and a decrease in tracheid lumen size in all species. Cedrus atlantica, which had the smallest tracheids, was the species most vulnerable to embolism: a 50% loss in hydraulic conductivity (PsiPLC50) occurred at a water potential of -4.4 MPa in the well-watered treatment, and at -6.0 MPa in the moderate drought treatment. In the other species, PsiPLC50 was unaffected by moderate soil drought, and only declined sharply at water potentials between -6.4 and -7.5 MPa in both irrigation treatments. During severe drought, Ks of twigs and stomatal conductance (g(s)) were measured simultaneously as leaf water potential declined. For all species, lower vulnerability to embolism based on loss of Ks was recorded on current-year twigs. The threshold for stomatal closure (10% of maximum g(s)) was reached at a predawn water potential (Psi(pd)) of -2.5 MPa in C. atlantica (Luberon) and at -3.1 MPa in C. libani (Lebanon), whereas the other provenance and species had intermediate Psi(pd) values. Cedrus brevifolia, with a Psi(pd) (-3.0 MPa) close to that of C. libani (Lebanon), had the highest stomatal conductance of the study species. The importance of a margin of safety between water potential causing stomatal closure and that causing xylem embolism induction is discussed. PMID:15996954

  2. Adding Semantics and OPM Ontology for the Provenance of Multi-sensor Merged Climate Data Records. Now What About Reproducibility?

    NASA Astrophysics Data System (ADS)

    Hua, H.; Wilson, B. D.; Manipon, G.; Pan, L.; Fetzer, E.

    2011-12-01

    Multi-decadal climate data records are critical to studying climate variability and change. These often also require merging data from multiple instruments such as those from NASA's A-Train that contain measurements covering a wide range of atmospheric conditions and phenomena. Multi-decadal climate data record of water vapor measurements from sensors on A-Train, operational weather, and other satellites are being assembled from existing data sources, or produced from well-established methods published in peer-reviewed literature. However, the immense volume and inhomogeneity of data often requires an "exploratory computing" approach to product generation where data is processed in a variety of different ways with varying algorithms, parameters, and code changes until an acceptable intermediate product is generated. This process is repeated until a desirable final merged product can be generated. Typically the production legacy is often lost due to the complexity of processing steps that were tried along the way. The data product information associated with source data, processing methods, parameters used, intermediate product outputs, and associated materials are often hidden in each of the trials and scattered throughout the processing system(s). We will discuss methods to help users better capture and explore the production legacy of the data, metadata, ancillary files, code, and computing environment changes used during the production of these merged and multi-sensor data products. By leveraging existing semantic and provenance tools, we can capture sufficient information to enable users to track, perform faceted searches, and visualize the provenance of the products and processing lineage. We will explore if sufficient provenance information can be captured to enable science reproducibility of these climate data records.

  3. Intraspecific Variation in Wood Anatomical, Hydraulic, and Foliar Traits in Ten European Beech Provenances Differing in Growth Yield.

    PubMed

    Hajek, Peter; Kurjak, Daniel; von Wühlisch, Georg; Delzon, Sylvain; Schuldt, Bernhard

    2016-01-01

    In angiosperms, many studies have described the inter-specific variability of hydraulic-related traits and little is known at the intra-specific level. This information is however mandatory to assess the adaptive capacities of tree populations in the context of increasing drought frequency and severity. Ten 20-year old European beech (Fagus sylvatica L.) provenances representing the entire distribution range throughout Europe and differing significantly in aboveground biomass increment (ABI) by a factor of up to four were investigated for branch wood anatomical, hydraulic, and foliar traits in a provenance trial located in Northern Europe. We quantified to which extend xylem hydraulic and leaf traits are under genetic control and tested whether the xylem hydraulic properties (hydraulic efficiency and safety) trades off with yield and wood anatomical and leaf traits. Our results showed that only three out of 22 investigated ecophysiological traits showed significant genetic differentiations between provenances, namely vessel density (VD), the xylem pressure causing 88% loss of hydraulic conductance and mean leaf size. Depending of the ecophysiological traits measured, genetic differentiation between populations explained 0-14% of total phenotypic variation, while intra-population variability was higher than inter-population variability. Most wood anatomical traits and some foliar traits were additionally related to the climate of provenance origin. The lumen to sapwood area ratio, vessel diameter, theoretical specific conductivity and theoretical leaf-specific conductivity as well as the C:N-ratio increased with climatic aridity at the place of origin while the carbon isotope signature (δ(13)C) decreased. Contrary to our assumption, none of the wood anatomical traits were related to embolism resistance but were strong determinants of hydraulic efficiency. Although ABI was associated with both VD and δ(13)C, both hydraulic efficiency and embolism resistance were

  4. Intraspecific Variation in Wood Anatomical, Hydraulic, and Foliar Traits in Ten European Beech Provenances Differing in Growth Yield.

    PubMed

    Hajek, Peter; Kurjak, Daniel; von Wühlisch, Georg; Delzon, Sylvain; Schuldt, Bernhard

    2016-01-01

    In angiosperms, many studies have described the inter-specific variability of hydraulic-related traits and little is known at the intra-specific level. This information is however mandatory to assess the adaptive capacities of tree populations in the context of increasing drought frequency and severity. Ten 20-year old European beech (Fagus sylvatica L.) provenances representing the entire distribution range throughout Europe and differing significantly in aboveground biomass increment (ABI) by a factor of up to four were investigated for branch wood anatomical, hydraulic, and foliar traits in a provenance trial located in Northern Europe. We quantified to which extend xylem hydraulic and leaf traits are under genetic control and tested whether the xylem hydraulic properties (hydraulic efficiency and safety) trades off with yield and wood anatomical and leaf traits. Our results showed that only three out of 22 investigated ecophysiological traits showed significant genetic differentiations between provenances, namely vessel density (VD), the xylem pressure causing 88% loss of hydraulic conductance and mean leaf size. Depending of the ecophysiological traits measured, genetic differentiation between populations explained 0-14% of total phenotypic variation, while intra-population variability was higher than inter-population variability. Most wood anatomical traits and some foliar traits were additionally related to the climate of provenance origin. The lumen to sapwood area ratio, vessel diameter, theoretical specific conductivity and theoretical leaf-specific conductivity as well as the C:N-ratio increased with climatic aridity at the place of origin while the carbon isotope signature (δ(13)C) decreased. Contrary to our assumption, none of the wood anatomical traits were related to embolism resistance but were strong determinants of hydraulic efficiency. Although ABI was associated with both VD and δ(13)C, both hydraulic efficiency and embolism resistance were

  5. Intraspecific Variation in Wood Anatomical, Hydraulic, and Foliar Traits in Ten European Beech Provenances Differing in Growth Yield

    PubMed Central

    Hajek, Peter; Kurjak, Daniel; von Wühlisch, Georg; Delzon, Sylvain; Schuldt, Bernhard

    2016-01-01

    In angiosperms, many studies have described the inter-specific variability of hydraulic-related traits and little is known at the intra-specific level. This information is however mandatory to assess the adaptive capacities of tree populations in the context of increasing drought frequency and severity. Ten 20-year old European beech (Fagus sylvatica L.) provenances representing the entire distribution range throughout Europe and differing significantly in aboveground biomass increment (ABI) by a factor of up to four were investigated for branch wood anatomical, hydraulic, and foliar traits in a provenance trial located in Northern Europe. We quantified to which extend xylem hydraulic and leaf traits are under genetic control and tested whether the xylem hydraulic properties (hydraulic efficiency and safety) trades off with yield and wood anatomical and leaf traits. Our results showed that only three out of 22 investigated ecophysiological traits showed significant genetic differentiations between provenances, namely vessel density (VD), the xylem pressure causing 88% loss of hydraulic conductance and mean leaf size. Depending of the ecophysiological traits measured, genetic differentiation between populations explained 0–14% of total phenotypic variation, while intra-population variability was higher than inter-population variability. Most wood anatomical traits and some foliar traits were additionally related to the climate of provenance origin. The lumen to sapwood area ratio, vessel diameter, theoretical specific conductivity and theoretical leaf-specific conductivity as well as the C:N-ratio increased with climatic aridity at the place of origin while the carbon isotope signature (δ13C) decreased. Contrary to our assumption, none of the wood anatomical traits were related to embolism resistance but were strong determinants of hydraulic efficiency. Although ABI was associated with both VD and δ13C, both hydraulic efficiency and embolism resistance were

  6. THE NOCHAR{reg_sign} TECHNOLOGY DEPLOYMENT PROGRAM, PROVIDING A PROVEN METHOD WORLDWIDE FOR WASTE SOLIDIFICATION AND STABILIZATION

    SciTech Connect

    Brunkow, W. G.; Govers, R.; Pietsch, C.; Kelley, D.; Krause, D.

    2002-02-25

    With the recent fall of the Soviet government and the decommissioning of defense plants in the U.S. DOE Complex, and the increasing worldwide emphasis on environmental restoration and controls, a critical need has developed for a proven ''off the shelf'' technology to deal with these enormous hazardous waste issues. While many new technologies are on the horizon and under development to handle complex waste streams, few of these offer immediate solutions. High technology polymers are an answer to present day needs that will allow immediate burial site disposal, above ground depository use for ''safe store'' applications, and stabilization and immobilization plans for safe transport or incineration at a later date.

  7. Epidemiology of biopsy proven giant cell arteritis in northwestern Spain: trend over an 18 year period

    PubMed Central

    Gonzalez-Gay, M; Garcia-Porrua, C; Rivas, M; Rodriguez-Ledo, P; Llorca, J

    2001-01-01

    OBJECTIVE—In Europe giant cell arteritis (GCA) is more common in Scandinavian countries than in southern regions. Epidemiological studies on GCA in other more distant countries have indicated a progressive increase in incidence. A regular cyclical pattern in incidence of GCA over 20 years has been reported in Olmsted County (Minnesota, USA). In contrast, no cyclical fluctuation has been recently reported in Sweden. To investigate further the epidemiology of GCA in southern Europe the trend in incidence and fluctuations of this vasculitis over 18 years in the Lugo region of northwestern Spain were examined.
METHODS—A retrospective study of biopsy proven GCA diagnosed between 1 January 1981 and 31 December 1998 at a single hospital for a well defined population of almost 250 000 people. Annual incidence was calculated for the whole group of patients and for men and women separately. Monthly variations, annual peaks of incidence, and trend in the incidence of biopsy proven GCA with and without polymyalgia rheumatica (PMR) were also examined.
RESULTS—One hundred and sixty one Lugo residents were diagnosed with biopsy proven GCA between 1981 and 1998. The average annual incidence for the population aged 50 and older was 10.24/100 000 (men 11.00/100 000, women 9.57/100 000). A progressive increase in the incidence in both men and women was seen. In men there was an annual increase of 8% (95% CI 4% to 13%; p<0.0001). In women the annual increase was 11% (95% CI 5% to 17%; p<0.0001). The overall annual increase for men and women was 10% (95% CI 6% to 14%; p<0.0001). No seasonal pattern or peaks in the incidence were seen. During the period 1981-94 GCA was more common in men than in women. In contrast, during the last years of study the increase in incidence was higher in women. In women the annual ratio of incidence of GCA with PMR/incidence of GCA without PMR was generally higher than 1. However, in men the annual ratio was initially 1

  8. Using pebble lithology and roundness to interpret gravel provenance in piedmont fluvial systems of the Rocky Mountains, USA

    USGS Publications Warehouse

    Lindsey, D.A.; Langer, W.H.; Van Gosen, B. S.

    2007-01-01

    Clast populations in piedmont fluvial systems are products of complex histories that complicate provenance interpretation. Although pebble counts of lithology are widely used, the information provided by a pebble count has been filtered by a potentially large number of processes and circumstances. Counts of pebble lithology and roundness together offer more power than lithology alone for the interpretation of provenance. In this study we analyze pebble counts of lithology and roundness in two contrasting fluvial systems of Pleistocene age to see how provenance varies with drainage size. The two systems are 1) a group of small high-gradient incised streams that formed alluvial fans and terraces and 2) a piedmont river that formed terraces in response to climate-driven cycles of aggradation and incision. We first analyze the data from these systems within their geographic and geologic context. After this is done, we employ contingency table analysis to complete the interpretation of pebble provenance. Small tributary streams that drain rugged mountains on both sides of the Santa Cruz River, southeast Arizona, deposited gravel in fan and terrace deposits of Pleistocene age. Volcanic, plutonic and, to a lesser extent, sedimentary rocks are the predominant pebble lithologies. Large contrasts in gravel lithology are evident among adjacent fans. Subangular to subrounded pebbles predominate. Contingency table analysis shows that hard volcanic rocks tend to remain angular and, even though transport distances have been short, soft tuff and sedimentary rocks tend to become rounded. The Wind River, a major piedmont stream in Wyoming, drains rugged mountains surrounding the northwest part of the Wind River basin. Under the influence of climate change and glaciation during the Pleistocene, the river deposited an extensive series of terrace gravels. In contrast to Santa Cruz tributary gravel, most of the Wind River gravel is relatively homogenous in lithology and is rounded to

  9. Magnetic properties contribution to the identification and provenance of marine sediments: distal IRD in the Galicia Interior Basin (NW Spain)

    NASA Astrophysics Data System (ADS)

    Plaza-Morlote, Maider; Rey, Daniel; Francisco Santos, Jose; Ribeiro, Sara; Bernabeu, Ana; Mohamed, Kais; Heslop, David; Rubio, Belén; Martins, Virginia

    2016-04-01

    This paper discusses the advantages of using a combined environmagnetic and geochemical approach to the provenance and characterization of distal IRDs occurring during the Last Glacial Period in core CI12PC3 from the Galicia Interior Basin (GIB). Six Heinrich layers (HL1-6) have been identified in the area in base to the detection of distinct populations of exotic magnetic mineral assemblages alien to the local/regional sedimentation environment. Their extension has been determined by Ca/Sr and Si/Sr ratios and their provenance by 143Nd/144Nd and 87Sr/86Sr isotopic ratios and FORCs. The sedimentary expression of HL is characterized by the presence of distal Ice Rafted Detritus (IRD). Distal IRD magnetic signatures in the GIB consist of (i) an increase of one order of magnitude in the peak amplitude of magnetic susceptibility from background values, (ii) a general coarsening of the magnetic grain size in a mineral assemblage dominated by titano-magnetites, (iii) FORC distributions pushing towards the coarse MD or PSD component, and (iv) thermomagnetic curves depicting the occurrence of several magnetite phases. These four features are very different from the fine-grained biogenic magnetic assemblages characterized by the combination of lower MS and higher coercivity values that dominate the predominant mixtures of the non-interacting SSD and PSD components in the non-IRD influenced background sedimentation. Our results show that the last 70.000 yr of sedimentation in the GIB were controlled by the relative contribution of local detrital material derived from the Iberian Variscan Chain and IRD alien material from the iceberg melting during the Heinrich Events. They also show two main IRD provenance fields: Europe and Canada. And that the later is more important for for HL1, HL2, HL4 and HL5. FORCs analysis complemented the isotopic information and provided a very unique information, indicating that glacial flour may not always have the same provenance as IRD and that

  10. Geochemistry of Jurassic to earliest Cretaceous deposits in the Nagato Basin, SW Japan: implication of factor analysis to sorting effects and provenance signatures

    NASA Astrophysics Data System (ADS)

    Ohta, Tohru

    2004-10-01

    One of the intractable problems in provenance analysis is the hydraulic sorting effect and resultant mineralogical heterogeneity in coarse- and fine-grained sediments which conceals provenance characteristics. The present study uses factor analysis to address geochemical responses to the sorting effect and provenance of Late Mesozoic sediments in the Nagato Basin, SW Japan. Factor analysis has proven useful for comprehending geochemical gradients between coarse- and fine-grained sediments. In the present example, compositional differences are based on varying proportions of quartz, plagioclase, chrome spinel, authigenic minerals and phyllosilicates. The contrasting behaviors of these minerals during the depositional stage resulted in the systematic fractionation of SiO 2/Al 2O 3, Na 2O/K 2O and Cr/Ba. Sandstones and mudstones exhibit an array of compositions in SiO 2/Al 2O 3-Na 2O/K 2O and SiO 2/Al 2O 3-Cr/Ba diagrams, the ranges of which reflect compositional variations due to the sorting effect. Sediments of different provenance exhibit distinctive mineral arrays and can be discriminated simply by reading the gradients of the continua. Therefore, this kind of data management concurrently quantifies the sorting effect and allows an estimation of the original source material. The SiO 2/Al 2O 3-Na 2O/K 2O diagram is particularly useful for scrutinizing igneous and mature continental provenances, while the SiO 2/Al 2O 3-Cr/Ba diagram ascertains contributions from mafic sources. This investigative approach delineates a systematic provenance transition within the Nagato Basin: a serpentinite melange provenance in the early Early Jurassic, a magmatic arc in the late Early to middle Middle Jurassic and a continental interior in the latest Jurassic to earliest Cretaceous. The provenance changed by the direct input of mature continental material into the Nagato Basin, which resulted from dissection of the volcanic arc.

  11. Preliminary results on time-resolved ion beam induced luminescence applied to the provenance study of lapis lazuli

    NASA Astrophysics Data System (ADS)

    Czelusniak, C.; Palla, L.; Massi, M.; Carraresi, L.; Giuntini, L.; Re, A.; Lo Giudice, A.; Pratesi, G.; Mazzinghi, A.; Ruberto, C.; Castelli, L.; Fedi, M. E.; Liccioli, L.; Gueli, A.; Mandò, P. A.; Taccetti, F.

    2016-03-01

    This work will present preliminary results concerning the use of time-resolved ion beam induced luminescence applied to provenance studies of lapis lazuli. Measurements were performed at the pulsed beam facility at LABEC laboratory in Florence. Lapis lazuli is a semi-precious gemstone, used as ornament since the early civilizations that can be found in few places on Earth. The importance of this work lies in understanding the origin of various samples of lapis lazuli, from which it may be possible to gain insight into trade routes from ancient times. The samples studied in this work originated from Chile, Afghanistan, Tajikistan, Myanmar, and Siberia. The stones were irradiated with 3 MeV protons and the resulting luminescence was detected by a photomultiplier tube, whose output was acquired using a sampling digitizer VME module (CAEN/V1720). Wavelength discrimination was performed at 430 nm utilizing a range of beam currents. The results showed that, by changing the beam current intensity, one can study different features of lapis lazuli, and this may aid in distinguishing lapis lazuli from different provenances.

  12. Petrography and chemistry of the bed sediments of the Red River in China and Vietnam: Provenance and chemical weathering

    NASA Astrophysics Data System (ADS)

    Borges, Joniell; Huh, Youngsook

    2007-02-01

    The Red (Hong) River straddles southwestern China and northern Vietnam and drains the eastern Indo-Asian collision zone. We collected bed sediments from its tributaries and main channel and report the petrographic point counts of framework grains and major oxide compositions as well as organic and inorganic carbon contents. The Q:F:Rf ratios and Q:F:(L-L c) ratios of the bed-load indicate quartz-poor, mineralogically immature sediments of recycled orogen provenance. The weathering indices based on major oxides — the chemical index of alteration (CIA) and the weathering index of Parker — are also consistent with the recycled sedimentary nature of the bed sediments. Using geographic information system (GIS) we calculated for each sample basin such parameters as temperature, precipitation, potential evapotranspiration, runoff, basin length, area, relief, and areal exposure of igneous, metamorphic and sedimentary rocks. Statistically meaningful correlations are obtained between the two weathering indices, between CIA and sedimentary to metamorphic rock fragments ratio, S / (S + M), and between CIA and sedimentary rock cover, but otherwise correlations are poor. The bed sediments preserve signatures of their provenance, but the effect of weathering is not clearly seen. Subtle differences in the bed sediments are observed between the Red and the Himalayan rivers (Indus, Ganges, and Brahmaputra) as well as between sub-basins within the Red River system and are attributed mainly to differences in lithology.

  13. Detrital zircon records of Late Cretaceous syn-rift sedimentary sequences of New Caledonia: An Australian provenance questioned

    NASA Astrophysics Data System (ADS)

    Cluzel, Dominique; Adams, Christopher J.; Maurizot, Pierre; Meffre, Sébastien

    2011-03-01

    The Late Cretaceous clastic coastal sediments of New Caledonia are contemporaneous with the latest stages of the eastern Australian marginal rifting. As such, they record the erosion of basement terranes located on uplifted and tilted blocks and a contemporaneous volcanic activity. Detrital zircon populations contain two major components, the younger of which is Early Cretaceous, and the older Early Paleozoic and Precambrian. Following recent advances in the knowledge of detrital zircon content of basement terranes, and at variance with previous interpretations, that hypothesised a possible direct Australian provenance for Precambrian zircons, the detrital zircon record of these syn-rift sediments allows a local recycled provenance to be established. In consequence, this new evidence confirms that New Caledonia was already isolated from Australia as early as Coniacian time (ca. 89-85 Ma) a fact consistent with the development of faunal and floral endemism at that period. The prominent abundance of Early Cretaceous detrital zircons also establishes the importance of a previously unrecorded Early Cretaceous magmatism in the area.

  14. Geochemistry of Neogene sedimentary rocks from Borneo Basin, Malaysia: implications on paleo-weathering, provenance and tectonic setting

    NASA Astrophysics Data System (ADS)

    Ramasmay, N.; Roy, P.; MP, J.; Rufino, L.; Franz, L. K.; Viswanathan, P. M.

    2013-05-01

    Multi-element geochemistry and mineralogy are used to characterize the chemical composition, degree of paleo-weathering, provenance and tectonic settingsof the Neogene sedimentary rocks of Borneo Basin from east Malaysia. The sedimentary rocks are classified as extremely weathered sandstones (i.e. wacke, arkose, litharenite, Fe-sandstone and quartz arenite). Higher values of both weathering indices of alteration (i.e. CIA>83 and PIA>89) suggest that the sandstones have undergone extreme chemical weathering. Absence of any feldspar in the mineralogical analysis indicates its degradation during the weathering. Except for the quartz arenite, all other sandstones are characterized by post-depositional K-metasomatism and zircon enrichment through sediment recycling. The geochemical characteristics suggest a mixed-nature provenance for the sandstones with contribution coming from both felsic and mafic igneous rocks. Enriched Cr in quartz arenite and Fe-sandstone are related to contribution from ophiolite or fractionation of Cr-bearing minerals. The inferred tectonic settings are variable and suggest a complex nature of tectonic environment in the basin.

  15. Detrital zircon provenance analysis in the Zagros Orogen, SW Iran: implications for the amalgamation history of the Neo-Tethys

    NASA Astrophysics Data System (ADS)

    Zhang, Zhiyong; Xiao, Wenjiao; Majidifard, Mahmoud Reza; Zhu, Rixiang; Wan, Bo; Ao, Songjian; Chen, Ling; Rezaeian, Mahnaz; Esmaeili, Rasoul

    2016-03-01

    The Zagros Orogen developed as a result of Arabia-Eurasia collision. New in situ detrital zircon U-Pb and Hf isotopic analyses from a Cenozoic sedimentary sequence in SW Iran are used to unravel the amalgamation history of Neo-Tethys. Data indicate that: (1) Paleocene and Eocene strata (58 and 45 Ma, respectively) were sourced from obducted ophiolite and Triassic volcanics, (2) Lower Miocene (~18 Ma) strata indicate mixed provenance from obducted ophiolite and Iranian magmatic rocks, (3) Mid to Upper Miocene sediments (~14 to 11.2 Ma) were mainly sourced from Sanandaj-Sirjan zone granitoids to the north, and (4) Lower Pliocene (~5 Ma) sediments mainly show Arabian age characteristics, with a minor Eurasian affinity component. Two hypotheses are outlined to highlight the key events: Hypothesis A, previously published by several workers, suggests that the sequence studied lay on the Arabia passive margin and that initial collision occurred prior to 18 Ma; Hypothesis B, modified from the Makran model, which is here preferred, suggests that Paleogene to Upper Miocene sediments were sourced from the northern Neo-Tethyan accretionary complex or Eurasia, and carry no input from Arabia, whereas the Lower Pliocene sample shows a mixed provenance from both Arabia and Eurasia, suggesting that collision occurred between ~11.2 and 5 Ma.

  16. Magnetic Susceptibility and Mineral Zonations Controlled by Provenance in Loess along the Illinois and Central Mississippi River Valleys

    USGS Publications Warehouse

    Grimley, D.A.; Follmer, L.R.; McKay, E.D.

    1998-01-01

    Magnetic susceptibility (MS) patterns have proven useful for regional stratigraphic correlations of zones within thick, oxidized Peoria and Roxana Silts along the Illinois and Central Mississippi River valleys for more than 350 km. Variations in MS of C horizon loess are controlled by silt-sized magnetite content and are interpreted to reflect changes in sediment provenance due to fluctuations of the Superior and Lake Michigan glacier lobes and the diversion of the Mississippi River to its present course. Grain size distributions and scanning electron microscopic observations indicate that stratigraphic changes in MS are not significantly influenced by eolian sorting or diagenetic dissolution, respectively. Three compositional zones (lower, middle, and upper) are delineated within Peoria Silt which usually can be traced in the field by MS, the occurrence of clay beds, interstadial soils, and/or subtle color changes. These zones can be correlated with, but are generally of more practical use than, previously studied dolomite zones (McKay, 1977) or clay mineral zones (Frye et al., 1968). However, mineralogical analyses can help to substantiate zone boundaries when in question. MS and compositional zones may indirectly record a climatic signal, primarily through the effect that global cooling has had on ice lobe fluctuations in the Upper Mississippi drainage basin. ?? 1998 University of Washington.

  17. The importance of XRD analysis in provenance and palaeoenvironmental studies of the Piedras de Afilar Formation, Neoproterozoic of Uruguay

    NASA Astrophysics Data System (ADS)

    Pamoukaghlian, K.; Poiré, D. G.; Gaucher, C.; Uriz, N.; Cingolani, C.; Frigeiro, P.

    2009-04-01

    The Piedras de Afilar Formation crops out in the southeast part of Uruguay, forming part of the Tandilia Terrane (sensu Bossi et al. 2005). Pamoukaghlian et al. (2006) and Gaucher et al. (2008) have published δ13C, δ18O and U/Pb SHRIMP results, which indicate a Neoproterozoic age for this formation. The palaeoenvironment has been defined as a shallow marine platform based on the presence of interference ripples, hummocky and mega-hummocky cross-stratification. X-ray diffraction (XRD) analyses help to better constrain the palaeoenvironment: the presence of chlorite/smectite found in black shales, suggest a reducing environment, and abundant illite indicates a cold to temperate climate. Provenance studies have been undertaken that utilise a combination of detailed palaeocurrent measurements, petrographic descriptions, XRD analyses, and geochemical isotopic analyses, including U/Pb SHRIMP determinations. Mineral compositional diagrams for sandstones suggest a stable cratonic provenance. Palaeocurrents are mainly from the NNE, indicating a provenance from the cratonic areas of the Tandilia Terrane. The illite crystal index indicates diagenetic to low-metamorphic conditions for the sequence; this is important to confirm that the identified minerals are authigenic. Clay minerals identified by XRD analysis of sandstones from the siliciclastic member are illite (80 - 90%), kaolinite (5 - 10%), and chlorite (5 - 10%). This is consistent with a provenance from the cratonic areas (quartz-feldspar dominated rock types). Isotopic analyses have been undertaken to provide better constraints on the tectonic setting. U/Pb SHRIMP ages for the youngest zircons are 990 Ma (Gaucher et al. 2008), and the basal granite (Granito de la Paz) is 2056 ± 11 Ma (Hartmann et al. 2001), suggesting a provenance from the Archaean basement for the Piedras de Afilar Formation, like its counterparts in the Rio de la Plata Craton. References Bossi, J., Piñeyro, D., Cingolani, C. (2005). El l

  18. Black and red granites in the Egyptian Antiquity Museum of Turin. A minero-petrographic and provenance study.

    NASA Astrophysics Data System (ADS)

    Serra, M.; Borghi, A.; Vaggelli, G.; D'Amicone, E.; Vigna, L.

    2009-04-01

    The University of Turin, in cooperation with the Egyptian Antiquity Museum, has recently undertaken several projects aimed at developing a scientific approach to the analysis of ancient Egyptian finds. In particular, a straightforward project to investigate the stony handcrafts preserved in the statuary rooms started in 2006 to obtain their systematic petrographic classification and their possible geological sources. The main intent of the project was to understand the provenance of the materials used in Pharaonic period, setting the base for the identification of the ancient quarry sites and for a correct interpretation of the extraction and working techniques, in order to provide fundamental information about economical and social development of Egyptian civilization through historical times. The choice to focus attention on black and red granites came from the statement of the percentage relevance (40 of the 54 sculptures actually exposed) of these materials in the statuary rooms. Moreover, especially for black granites, the need of detailed minero-petrographic analysis arose from the difficulty in making a macroscopic classification of the fine-grained dark-coloured rock varieties. Therefore, five black granite statues, belonging to the Drovetti collection were sampled in a micro-invasive way: three sculptures of goddess Sekhmet (cat. 260, 251, 247), the statue of Ramses II (cat. 1380) and the statue of goddess Hathor (cat. 694). The choice to analyse even three of the twenty-one statues of goddess Sekhmet (cat. 247, cat. 251, cat. 260), originally located in the same Egyptian temple but ichnographically different, derived from the need of answering the archaeological questions about their provenance. On the other hand, the opportunity of studying the fine-grained black rocks used for the sculptures of goddess Hathor (cat. 694) and of Ramses II in Majesty (cat. 1380), symbol of the Egyptian museum of Turin, provided the opportunity to analyse and classify the

  19. Standardization and program effect analysis (Study 2.4). Volume 2: Equipment commonality analysis. [cost savings of using flight-proven components in designing spacecraft

    NASA Technical Reports Server (NTRS)

    Shiokari, T.

    1975-01-01

    The feasibility and cost savings of using flight-proven components in designing spacecraft were investigated. The components analyzed were (1) large space telescope, (2) stratospheric aerosol and gas equipment, (3) mapping mission, (4) solar maximum mission, and (5) Tiros-N. It is concluded that flight-proven hardware can be used with not-too-extensive modification, and significant savings can be realized. The cost savings for each component are presented.

  20. Paleocene Turbidite Deposition in the Central American Seaway (NW Costa Rica): Geochemical Analysis and Provenance of Detrital Spinel and Clinopyroxene

    NASA Astrophysics Data System (ADS)

    Giblin, A. C.

    2015-12-01

    The Central American Land Bridge is the crucial connection between North and South America, and the Miocene closure of the Panama seaway led to a change in global oceanic circulation patterns. Modern Costa Rica is part of the island arc that formed over the western Caribbean subduction zone, and the Santa Elena peninsula is on the northwest coast of Costa Rica next to the Sandino forearc basin. This study focuses on the origin and provenance of the Paleocene deep-water Rivas and Descartes turbidites that crop out on the northern part of the Santa Elena peninsula in northwestern Costa Rica. Understanding the sedimentary fill of the Sandino Basin that contributed to the closing of the seaway may lead to a better understanding of the Late Cretaceous-Paleogene arcs. Provenance studies of the Santa Elena Peninsula turbidite sandstone bodies constrain the history of the paleogeography and tectonics of the region. Petrographic analyses of rock thin sections constrain source areas; geochemical analysis of individual detrital heavy minerals from rock samples give indications of sediment sources and tectonic setting during deposition. This study is a provenance analysis based on (i) semi-quantitative energy-dispersive spectrometry analysis of heavy minerals, (ii) quantitative wavelength-dispersive spectrometry for major elements of detrital clinopyroxene and spinel grains, (iii) trace element analysis through laser ablation of single detrital clinopyroxene grains, and (iv) comparative analysis of the different potential source rocks to clearly identify the most likely sediment sources. The detrital spinel and clinopyroxene are possibly sourced from: mantle ophiolites, mid-ocean ridge gabbros, or volcanic arc tholeiitic basalts or calc-alkaline andesites. Spinel and clinopyroxne geochemistry suggests a possible peridotitic source, linked to mantle rocks that are now covered by Tertiary volcanics or have completely eroded. The character of the crustal minerals indicates

  1. Tracking Monsoon Related Provenance Changes in Continental Margin Sediments of the East China Sea: Preliminary Results from IODP Expedition 346.

    NASA Astrophysics Data System (ADS)

    Anderson, C. H.; Dunlea, A. G.; Murray, R. W.; Kinsley, C. W.; McGee, D.; Giosan, L.; Zheng, H.; Tada, R.; Alvarez Zarikian, C. A.

    2014-12-01

    Sedimentation in the East China Sea (ECS) is driven largely by fluvial and eolian fluxes that are likely influenced by the East Asian Monsoon (EAM). Terrigenous matter from the Yangtze River is transported into the ECS and is also carried by winds of the Westerly Jet. Seasonal and long term shifts in the atmospheric and precipitation regimes over Asia are recorded in the inorganic chemistry of the sediment of the ECS and other Asian coastal seas. For example, changes in intensity and timing of the EAM over short and long term time scales likely impact the relative proportion of fluvial and eolian inputs to the region, and perhaps their individual sources. Bulk sediment was recovered from IODP Sites U1428 and U1429 in the ECS during Expedition 346. T these sites are separated by 7.4 km, located in the northernmost portion of the ECS in the Danjo Basin, and are generally characterized by two sedimentary units. Unit A is largely nannofossil-rich calcareous ooze and calcareous-rich clays, punctuated with smaller tephra layers throughout. Unit B is composed of fine- to medium-grained, rounded sands. Here we present major, trace and rare earth element (REE) data for 54 bulk sediment samples analyzed via ICP-ES and ICP-MS. We trace downhole fluctuations in the geochemical data in order to investigate the provenance of terrigenous material during the Pleistocene. Preliminary major element concentration data indicate the presence of distinct continental sediment and carbonates at both sites. Average downhole major element ratios exhibit limited variation at both sites. For example, Ti/Al (g/g) is tightly constrained with values of 0.05 /- 0.003, Fe/Al 0.5 /- 0.05, and Si/Al 3.3 /- 0.3. In addition to standard geochemical techniques to assess provenance, we are using multivariate statistics (e.g., Q-Mode Factor Analyses, Multiple Linear Regressions) to examine this large dataset. We focus on a smaller suite of elements that are exclusively associated with the terrigenous

  2. Subalpine Conifer Seedling Demographics Across an Elevational Gradient at Niwot ridge, Colorado: Comparison of Site, Species, and Provenance

    NASA Astrophysics Data System (ADS)

    Castanha, C.; Weibel, B.; Torn, M. S.; Kueppers, L. M.

    2009-12-01

    The effect of climate change on future ranges of treeline species is poorly understood. For example, it is not known whether trees will recruit into the alpine, above the current treeline, and whether population-level differences in trees will mediate range shifts. At Niwot Ridge, Colorado, we used a series of common garden experiments to compare the survival of seedlings from two species (limber pine vs. englemann spruce) and from two elevations (krummholz vs. subalpine forest) planted along an elevation gradient spanning subalpine forest (10,000’), krummholz (11,000’), and alpine tundra (11,300’). In 2009, we measured (1) germination success and seedling longevity for seeds sown in fall 2008 (“outplants”) and (2) longevity of seedlings that were germinated indoors and transplanted as soon as possible after germination and snowmelt in 2009 (“transplants”). All seeds were locally harvested in fall 2008. Site exerted a strong effect on snowmelt date, period between snowmelt and germination, germination rates, and seedling longevity. For all species and populations, germination rates were highest at the subalpine forest site and lowest at the alpine site. For any given species and provenance, the seedlings transplanted into the subalpine forest site survived for the longest periods and those transplanted into the krummholz site survived for the shortest periods. Species and provenance also affected seedling germination and longevity: (1) For fall outplants, germination rates were higher for pine than for spruce, and the period between snowmelt and germination was shortest for low elevation spruce and longest for high elevation pine. Spruce germinants from low elevation seed had the highest longevity at the subalpine forest site whereas spruce germinants from high elevation seed fared marginally better at the krummholz site. (2) For summer transplants, the effect of species and provenance on survival was the same at each site; limber pine survived longer

  3. Temporal and spatial variations in provenance of Eastern Mediterranean Sea sediments: Implications for Aegean and Aeolian arc volcanism

    NASA Astrophysics Data System (ADS)

    Klaver, Martijn; Djuly, Thomas; de Graaf, Stefan; Sakes, Alex; Wijbrans, Jan; Davies, Gareth; Vroon, Pieter

    2015-03-01

    The Eastern Mediterranean Sea (EMS) is the last remnant of the Tethys Ocean that has been subducted to the north since the Jurassic. Subduction has led to the formation of multiple island arcs in the EMS region where the Aeolian and Aegean arcs are currently active. The EMS is surrounded by continents and receives a large sediment input, part of which is transported down with the subducting slab into the mantle and potentially contributes a major flux to the arc volcanism. An along-arc gradient in the composition of subducting sediment has been evoked to explain the distinct geochemical signature of the easternmost volcanic centre of the Aegean arc, but direct evidence for this proposal is lacking. We present a detailed study of the mineralogical, major-, trace elements and Sr-Nd-Hf-Pb isotope composition of 45 Neogene EMS sediment samples obtained from Deep Sea Drilling Project (DSDP) and Ocean Drilling Program (ODP) drill sites and box cores to characterise their geochemical composition, distinguish provenance components and investigate the temporal and spatial variation in provenance to evaluate the potential changing contribution of subducted EMS sediment to Aegean and Aeolian arc volcanism. Based on trace element characteristics of EMS sediments, we can distinguish four provenance components. Nile sediment and Sahara dust are the main components, but contributions from the Tethyan ophiolite belt and arc volcanic rocks in the north are also recognised. Pliocene and Quaternary EMS sediment records a strong geochemical gradient where Nile River sediment entering the EMS in the east is progressively diluted by Sahara Desert dust towards the west. Pre-Messinian samples, however, have a remarkably homogeneous composition with Nile sediment characteristics. We relate this rapid increase in Sahara dust contribution to a late Miocene climate shift leading to decreased Nile runoff and aridification of the Sahara region. EMS sediment has a restricted range in Pb isotopes

  4. The ethical leadership challenge for effective resolution of patient and family complaints and grievances: proven methods and models.

    PubMed

    Piper, Llewellyn E; Tallman, Erin

    2015-01-01

    Health care leaders and managers face the ethical leadership challenge in ensuring effective resolution of patient and family complaints and grievances. In today's society of increasing discontent about safety, quality, cost, and satisfaction, patient complaints and grievances are becoming more prevalent. Under the mandates of the Patient Protection and Affordable Care Act for transparency of quality and patient satisfaction scores and to be compliant with the standards from the Centers for Medicare & Medicaid Services and The Joint Commission, it is imperative that leadership ensure an ethical culture for effective resolution of patient and family complaints and grievances. This article addresses this ethical leadership challenge by providing a systematic approach with proven methods and models for effective resolution of complaints and grievances and thereby improving satisfaction, quality, safety, and cost.

  5. [Multifocal histoplasmosis due to Histoplasma capsulatum var. duboisii in a 22 year-old Senegalese patient without proven immunodepression].

    PubMed

    Diadie, S; Diatta, B; Ndiaye, M; Gaye, M; Sow, D; Ndiaye, M T; Seck, B; Diallo, S; Diop, A; Diallo, M; Ly, F; Niang, S O; Kane, A; Dieng, M T

    2016-09-01

    The authors report a case of multifocal African histoplasmosis with polymorphic skin involvement occuring in a patient without proven immunosuppression. He was a young 22-year-old patient from eastern Senegal - but born in Ouganda - who presented with polymorphic skin lesions: ombilicated papulo-nodules, gums and ulcerative and budding lesions. He showed lymphadenopathies without clinical inflammation and with a cheesy appearance of the biopsy but without tuberculosis and also hepatosplenic and bone involvement. Mycological samples of the skin and lymph nodes biopsies revealed yeasts of Histoplasma capsulatum var. duboisii with a positive culture on Sabouraud medium. HIV serology, HTLV1et 2, the serum proteins electrophoresis were unremarkable. Treatment with amphotericin B was irregular because of its inaccessibility in the national territory and its cost. The patient died of sepsis together with the aggravation of his disease. PMID:27158080

  6. Using stable isotopes and functional wood anatomy to identify underlying mechanisms of drought tolerance in different provenances of lodgepole pine

    NASA Astrophysics Data System (ADS)

    Isaac-Renton, Miriam; Montwé, David; Hamann, Andreas; Spiecker, Heinrich; Cherubini, Paolo; Treydte, Kerstin

    2016-04-01

    Choosing drought-tolerant seed sources for reforestation may help adapt forests to climate change. By combining dendroecological growth analysis with a long-term provenance trial, we assessed growth and drought tolerance of different populations of a wide-ranging conifer, lodgepole pine (Pinus contorta). This experimental design simulated a climate warming scenario through southward seed transfer, and an exceptional drought also occurred in 2002. We felled over 500 trees, representing 23 seed sources, which were grown for 32 years at three warm, dry sites in southern British Columbia, Canada. Northern populations showed poor growth and drought tolerance. These seed sources therefore appear to be especially at risk under climate change. Before recommending assisted migration of southern seeds towards the north, however, it is important to understand the physiological mechanisms underlying these responses. We combine functional wood anatomy with a dual-isotope approach to evaluate these mechanisms to drought response.

  7. Uplifting of the Jiamusi Block in the eastern Central Asian Orogenic Belt, NE China: evidence from basin provenance and geochronology

    NASA Astrophysics Data System (ADS)

    Liu, Yongjiang; Wen, Quanbo; Han, Guoqing; Li, Wei

    2010-05-01

    The main part of Jiamusi Block, named as Huanan-Uplift, is located in the northeastern Heilongjiang, China. The Huanan-Uplift is surrounded by many relatively small Mesozoic-Cenozoic basins, e.g. Sanjiang Basin, Hulin Basin, Boli Basin, Jixi Basin, Shuangyashan Basin and Shuanghua Basin. However previous research works were mainly focused on stratigraphy and palaeontology of the basins, therefore, the coupling relation between the uplift and the surrounding basins have not been clear. Based on the field investigations, conglomerate provenance studies of the Houshigou Formation in Boli Basin, geochronology of the Huanan-Uplift basement, we have been studied the relationships between Huanan-Uplift and the surrounding basins. The regional stratigraphic correlations indicates that the isolated basins in the area experienced the same evolution during the period of the Chengzihe and the Muling Formations (the Early Cretaceous). The paleogeography reconstructions suggest that the area had been a large-scale basin as a whole during the Early Cretaceous. The Huanan-Uplift did not exist. The paleocurrent directions, sandstone and conglomerate provenance analyses show that the Huanan-Uplift started to be the source area of the surrounding basins during the period of Houshigou Formation (early Late Cretaceous), therefore, it suggests that the Jiamusi Block commenced uplift in the early Late Cretaceous. The granitic gneisses in Huanan-Uplift give 494-415 Ma monazite U-Th-total Pb ages, 262-259 Ma biotite and 246-241 Ma K-feldspar 40Ar/39Ar ages. The cooling rates of 1-2 ℃/Ma from 500-260 Ma and 10-11 ℃/Ma from 260-240 Ma have been calculated based on the ages. This suggests that the Jiamusi Block had a rapid exhumation during late Permian, which should be related to the closure of the Paleo-Asian Ocean between the Siberian and North China continents. It is concluded that during the late Paleozoic the Jiamusi Block was stable with a very slow uplifting. With the closure of

  8. [The application of trace element analysis to the study of provenance of copper minerals in ancient bronzes].

    PubMed

    Li, Qing-lin; Zhu, Jun-xiao; Qin, Ying; Mao, Zhen-wei; Wang, Chang-sui; Chen, Jian-li

    2005-10-01

    The simulated smelting and founding experiment of bronze showed that the copper minerals from different regions could be distinguished clearly by using the multi-statistical analysis based on choosing the chalcophile elements determined by ICP-AES. In the present paper, the data of trace elements in bronzes from Panlongcheng Site and Ezhou, which were determined by NAA, were tried to be processed. The analytical result showed that the bronzes from Panlongcheng and Ezhou could be divided clearly, just like the results of the former simulated smelting and founding experiment of bronze. So, the feasibility of trace element analysis for the study of provenance of copper minerals in ancient bronzes was proved again.

  9. Protein and DNA modifications: evolutionary imprints of bacterial biochemical diversification and geochemistry on the provenance of eukaryotic epigenetics.

    PubMed

    Aravind, L; Burroughs, A Maxwell; Zhang, Dapeng; Iyer, Lakshminarayan M

    2014-07-01

    Epigenetic information, which plays a major role in eukaryotic biology, is transmitted by covalent modifications of nuclear proteins (e.g., histones) and DNA, along with poorly understood processes involving cytoplasmic/secreted proteins and RNAs. The origin of eukaryotes was accompanied by emergence of a highly developed biochemical apparatus for encoding, resetting, and reading covalent epigenetic marks in proteins such as histones and tubulins. The provenance of this apparatus remained unclear until recently. Developments in comparative genomics show that key components of eukaryotic epigenetics emerged as part of the extensive biochemical innovation of secondary metabolism and intergenomic/interorganismal conflict systems in prokaryotes, particularly bacteria. These supplied not only enzymatic components for encoding and removing epigenetic modifications, but also readers of some of these marks. Diversification of these prokaryotic systems and subsequently eukaryotic epigenetics appear to have been considerably influenced by the great oxygenation event in the Earth's history. PMID:24984775

  10. Romanian ancient gold objects provenance studies using micro-beam methods: the case of “Pietroasa” hoard

    NASA Astrophysics Data System (ADS)

    Constantinescu, B.; Bugoi, R.; Cojocaru, V.; Voiculescu, D.; Grambole, D.; Herrmann, F.; Ceccato, D.

    2005-04-01

    Five fragments of ancient gold objects belonging to Pietroasa "Cloşca cu Puii de Aur" ("The Golden Brood Hen with Its Chickens") Romanian hoard were analysed using the micro-PIXE (particle induced X-ray emission) technique. The purpose of the study was to gain some more knowledge regarding the metal provenance by determining the presence of PGE (Platinum Group Elements) and other high-temperature melting point trace elements (Ta, Nb, Cr) at a micrometric scale. Ta and Nb inclusions (micrometric areas of composition different from the surroundings) on three samples and Pd inclusions on one sample were found. The measurements led to some conclusions for the possible gold ore sources of Pietroasa treasury: the South-Ural Mountains, Nubia (Sudan) and/or Anatolian deposits and Roman imperial coins.

  11. Protein and DNA Modifications: Evolutionary Imprints of Bacterial Biochemical Diversification and Geochemistry on the Provenance of Eukaryotic Epigenetics

    PubMed Central

    Aravind, L.; Burroughs, A. Maxwell; Zhang, Dapeng; Iyer, Lakshminarayan M.

    2014-01-01

    Epigenetic information, which plays a major role in eukaryotic biology, is transmitted by covalent modifications of nuclear proteins (e.g., histones) and DNA, along with poorly understood processes involving cytoplasmic/secreted proteins and RNAs. The origin of eukaryotes was accompanied by emergence of a highly developed biochemical apparatus for encoding, resetting, and reading covalent epigenetic marks in proteins such as histones and tubulins. The provenance of this apparatus remained unclear until recently. Developments in comparative genomics show that key components of eukaryotic epigenetics emerged as part of the extensive biochemical innovation of secondary metabolism and intergenomic/interorganismal conflict systems in prokaryotes, particularly bacteria. These supplied not only enzymatic components for encoding and removing epigenetic modifications, but also readers of some of these marks. Diversification of these prokaryotic systems and subsequently eukaryotic epigenetics appear to have been considerably influenced by the great oxygenation event in the Earth’s history. PMID:24984775

  12. Provenance of the Lapland Granulite Belt: evidence for silicic crustal acretion at 2.1-1.97 Ga

    NASA Astrophysics Data System (ADS)

    Tuisku, Pekka; Huhma, Hannu

    2003-04-01

    SIMS was used to reveal the provenance of Lapland Granulite Belt metasediments, now appearing as migmatitic granulites. Majority of the detrital grains in two outcrops studied fall in the age group 1.97-2.0 Ga, the medians are at 2015 and 2039Ma. The detrital grains are similar to those found in silicic plutonic and volcanic rocks. Because the LGB has great area extend, about 400 times 90 km, and because other studies (Sorjonen-Ward et. al., 1994, Claesson et. al, 1993) give similar results, it is concluded that there must have been a relatively large acid igneous province active between 1.97-2.1 Ga, which has eroded and then fed the sedimentary material for the LGB sediments and other comparable metasediments in the Fennoscandian shield. The Sm-Nd DM model age of the LGB metasediments is between 2300-2380 Ma. This also a common model age elsewhere in the shield. This kind of model age may be obtained by mixing of Svecofennian (1.9Ga) and Archaean material, as has been proposed earlier. However, considering the provenance of zircons, it is also possible to construct the model age by mixing Archaean and Palaeoproterozoic 2.0-2.1 Ga material; and possibly also Svecofennian ~1.9 Ga material as some, apparently relatively young detrital grains around 1.93-1.95 were found in the LGB metasediments. The major problem arises from the fact that there is no major outcropped acid igneous province of that age in the Fennoscandian Shield, and neither are such rocks common elsewhere in the world.

  13. The Northern Extent of the Southern Hemisphere Westerly Wind Belt since the Last Glacial Maximum Tracked via Sediment Provenance

    NASA Astrophysics Data System (ADS)

    Franzese, A. M.; Goldstein, S. L.; Hemming, S. R.

    2015-12-01

    The Southern Hemisphere Westerlies are known to be important for climate due to their effects on the global carbon cycle and on the global thermohaline circulation. Many proxy records suggest that the strength and position of the Southern Hemisphere westerly winds have changed significantly since the Last Glacial Maximum (LGM) at ~21,000 years BP. However, a recent compilation of all available evidence for Southern Hemisphere westerly wind changes during the Last Glacial Maximum (LGM) led to the conclusion that "their strength and position in colder and warmer climates relative to today remain a wide open question" (Kohfeld et al. (2013) Quaternary Science Reviews, 68). This paper finds that an equatorward displacement of the glacial winds is consistent with observations, but cannot rule out other, competing hypotheses. Using the geochemical characteristics of deep-sea sediments deposited along the Mid-Atlantic Ridge, I test the hypothesis that the LGM Southern Hemisphere Westerlies were displaced northward. In the central South Atlantic, dust can be delivered from South America via the Westerlies, or from Africa via the Trade Winds. The continental sources of South America and Africa have very different geochemical signatures, making it possible to distinguish between eolian transport via the Westerlies vs. the Trade Winds. Any northward shift in the Southern Hemisphere Westerlies would increase the northward extent of a South American provenance in sediments dominated by eolian sources. I will present geochemical provenance data (radiogenic isotope ratios; major and trace element concentrations) in a latitudinal transect of cores along the Mid-Atlantic Ridge that document whether, in fact, such a shift occurred, and put an important constraint on how far north the wind belts shifted during the LGM.

  14. Provenance of north Gondwana Cambrian-Ordovician sandstone: U-Pb SHRIMP dating of detrital zircons from Israel and Jordan

    USGS Publications Warehouse

    Kolodner, K.; Avigad, D.; McWilliams, M.; Wooden, J.L.; Weissbrod, T.; Feinstein, S.

    2006-01-01

    A vast sequence of quartz-rich sandstone was deposited over North Africa and Arabia during Early Palaeozoic times, in the aftermath of Neoproterozoic Pan-African orogeny and the amalgamation of Gondwana. This rock sequence forms a relatively thin sheet (1-3 km thick) that was transported over a very gentle slope and deposited over a huge area. The sense of transport indicates unroofing of Gondwana terranes but the exact provenance of the siliciclastic deposit remains unclear. Detrital zircons from Cambrian arkoses that immediately overlie the Neoproterozoic Arabian-Nubian Shield in Israel and Jordan yielded Neoproterozoic U-Pb ages (900-530 Ma), suggesting derivation from a proximal source such as the Arabian-Nubian Shield. A minor fraction of earliest Neoproterozoic and older age zircons was also detected. Upward in the section, the proportion of old zircons increases and reaches a maximum (40%) in the Ordovician strata of Jordan. The major earliest Neoproterozoic and older age groups detected are 0.95-1.1, 1.8-1.9 and 2.65-2.7 Ga, among which the 0.95-1.1 Ga group is ubiquitous and makes up as much as 27% in the Ordovician of Jordan, indicating it is a prominent component of the detrital zircon age spectra of northeast Gondwana. The pattern of zircon ages obtained in the present work reflects progressive blanketing of the northern Arabian-Nubian Shield by Cambrian-Ordovician sediments and an increasing contribution from a more distal source, possibly south of the Arabian-Nubian Shield. The significant changes in the zircon age signal reflect many hundreds of kilometres of southward migration of the provenance. ?? 2006 Cambridge University Press.

  15. The record of Miocene climatic events in AND-2A drill core (Antarctica): Insights from provenance analyses of basement clasts

    NASA Astrophysics Data System (ADS)

    Sandroni, Sonia; Talarico, Franco M.

    2011-01-01

    This paper includes the results of a detailed quantitative provenance investigation on gravel-size clasts occurring within the late Early to Late Miocene sedimentary glacimarine section recovered for the first time by the AND-2A core in the SW sector of the Ross Sea (southern McMurdo Sound, Antarctica). This period of time is of crucial interest, as it includes two of the major Cenozoic events in the global climatic evolution: the mid-Miocene climatic optimum and the middle Miocene climate transition. Petrographical and mineral chemistry data on basement clasts allow to individuate two different diagnostic clast assemblages, which clearly suggest two specific sectors of southern Victoria Land as the most likely sources: the Mulock-Skelton glacier and the Koettlitz-Blue glacier regions. Distribution patterns reveal high fluctuations of the detritus source areas throughout the investigated core interval, variations which can be interpreted as the direct result of an evolving McMurdo Sound paleogeography during the late Early to Late Miocene. Consistently with sedimentological studies, gravel-fraction clast distribution patterns clearly testify that the Antarctic ice sheet experienced a dramatic contraction at ca. 17.35 ± 0.14 Ma (likely correlated to the onset of the climatic optimum), and in a < ca. 100 ka time window passing from a glacial scenario comparable to the last glacial maximum (Phase 1) to a very dynamic glacial environment (Phase 2). Phase 2 conditions persisted through the early Middle Miocene (to ca. 14.2 Ma), when a major expansion of the Antarctic ice sheet is hypothesized, likely contemporaneously to the onset of the middle Miocene climate transition. Therefore, provenance and distribution studies of gravel-fraction clasts show that the variations of paleoenvironmental drivers characterising this period were able to exert deep transformation of the Antarctic ice sheet and reveal the methodology to be a powerful tool for the reconstruction of paleo

  16. New insights into the provenance of Saudi Arabian Palaeozoic sandstones from heavy mineral analysis and single-grain geochemistry

    NASA Astrophysics Data System (ADS)

    Bassis, Alexander; Hinderer, Matthias; Meinhold, Guido

    2016-03-01

    Saudi Arabian Palaeozoic siliciclastics cover a stratigraphic range from the Cambrian to the Permian. They crop out along the eastern margin of the Arabian Shield and are comprised of highly mature sandstones. Their heavy mineral assemblage reflects their mineralogical maturity and is dominated by the ultra-stable phases zircon, tourmaline and rutile. Less stable accessories are apatite, staurolite and garnet. Standard heavy mineral analysis of samples from two study areas in central/northern (Tabuk area) and southern (Wajid area) Saudi Arabia reveals distinct changes in provenance. Cambrian-Ordovician sandstones are first-cycle sediments, probably sourced from the 'Pan-African' basement. The overlying Hirnantian glaciogenic deposits consist of recycled Cambrian-Ordovician material. Devonian-Permian sandstones show a significant influx of fresh basement material, as attested by an increase of meta-stable heavy minerals. Single-grain geochemical analysis of rutile and garnet has proven to be a powerful supplementary technique. Rutile varietal studies reveal distinct differences in host rock lithologies between the two study areas: the Tabuk area contains predominantly felsic rutiles, whereas the Wajid area has more mafic input. Zr-in-rutile thermometry identified granulite-facies detritus in the lower Palaeozoic of the Tabuk area and has the potential to further define source areas. The distribution patterns of garnet host rock lithologies are remarkably similar in both study areas. They are dominated by amphibolite-facies metasediments and intermediate to felsic igneous rocks. Garnets derived from granulite-facies metasediments, which are scarce in the Arabian-Nubian Shield, also occur. Possible source rocks for high-grade garnets can be found in Yemen or farther south in the Mozambique Belt.

  17. Missing Rings, Synchronous Growth, and Ecological Disturbance in a 36-Year Pitch Pine (Pinus rigida) Provenance Study.

    PubMed

    Leland, Caroline; Hom, John; Skowronski, Nicholas; Ledig, F Thomas; Krusic, Paul J; Cook, Edward R; Martin-Benito, Dario; Martin-Fernandez, Javier; Pederson, Neil

    2016-01-01

    Provenance studies are an increasingly important analog for understanding how trees adapted to particular climatic conditions might respond to climate change. Dendrochronological analysis can illuminate differences among trees from different seed sources in terms of absolute annual growth and sensitivity to external growth factors. We analyzed annual radial growth of 567 36-year-old pitch pine (Pinus rigida Mill.) trees from 27 seed sources to evaluate their performance in a New Jersey Pine Barrens provenance experiment. Unexpectedly, missing rings were prevalent in most trees, and some years-1992, 1999, and 2006-had a particularly high frequency of missing rings across the plantation. Trees from local seed sources (<55 km away from the plantation) had a significantly smaller percentage of missing rings from 1980-2009 (mean: 5.0%), relative to northernmost and southernmost sources (mean: 9.3% and 7.9%, respectively). Some years with a high frequency of missing rings coincide with outbreaks of defoliating insects or dry growing season conditions. The propensity for missing rings synchronized annual variations in growth across all trees and might have complicated the detection of potential differences in interannual variability among seed sources. Average ring width was significantly larger in seed sources from both the southernmost and warmest origins compared to the northernmost and coldest seed sources in most years. Local seed sources had the highest average radial growth. Adaptation to local environmental conditions and disturbances might have influenced the higher growth rate found in local seed sources. These findings underscore the need to understand the integrative impact of multiple environmental drivers, such as disturbance agents and climate change, on tree growth, forest dynamics, and the carbon cycle.

  18. Missing Rings, Synchronous Growth, and Ecological Disturbance in a 36-Year Pitch Pine (Pinus rigida) Provenance Study.

    PubMed

    Leland, Caroline; Hom, John; Skowronski, Nicholas; Ledig, F Thomas; Krusic, Paul J; Cook, Edward R; Martin-Benito, Dario; Martin-Fernandez, Javier; Pederson, Neil

    2016-01-01

    Provenance studies are an increasingly important analog for understanding how trees adapted to particular climatic conditions might respond to climate change. Dendrochronological analysis can illuminate differences among trees from different seed sources in terms of absolute annual growth and sensitivity to external growth factors. We analyzed annual radial growth of 567 36-year-old pitch pine (Pinus rigida Mill.) trees from 27 seed sources to evaluate their performance in a New Jersey Pine Barrens provenance experiment. Unexpectedly, missing rings were prevalent in most trees, and some years-1992, 1999, and 2006-had a particularly high frequency of missing rings across the plantation. Trees from local seed sources (<55 km away from the plantation) had a significantly smaller percentage of missing rings from 1980-2009 (mean: 5.0%), relative to northernmost and southernmost sources (mean: 9.3% and 7.9%, respectively). Some years with a high frequency of missing rings coincide with outbreaks of defoliating insects or dry growing season conditions. The propensity for missing rings synchronized annual variations in growth across all trees and might have complicated the detection of potential differences in interannual variability among seed sources. Average ring width was significantly larger in seed sources from both the southernmost and warmest origins compared to the northernmost and coldest seed sources in most years. Local seed sources had the highest average radial growth. Adaptation to local environmental conditions and disturbances might have influenced the higher growth rate found in local seed sources. These findings underscore the need to understand the integrative impact of multiple environmental drivers, such as disturbance agents and climate change, on tree growth, forest dynamics, and the carbon cycle. PMID:27182599

  19. U-Pb Detrital Zircon Ages from Sarawak: Changes in Provenance Reflecting the Tectonic Evolution of Southeast Asia

    NASA Astrophysics Data System (ADS)

    Breitfeld, H. T.; Galin, T.; Hall, R.

    2014-12-01

    Sarawak is located on the northern edge of Sundaland in NW Borneo. Five sedimentary basins are distinguished with ages from Triassic to Cenozoic. New light mineral, heavy mineral and U-Pb detrital zircon ages show differences in provenance reflecting the tectonic evolution of the region. The oldest clastic sediments are Triassic of the Sadong-Kuching Basin and were sourced by a Carnian to Norian volcanic arc and erosion of Cathaysian rocks containing zircons of Paleoproterozoic age. Sandstones of the Upper Jurassic to Cretaceous Bau-Pedawan Basin have distinctive zircon populations indicating a major change of tectonic setting, including initiation of subduction below present-day West Sarawak in the Late Jurassic. A wide range of inherited zircon ages indicates various Cathaysian fragments as major source areas and the arrival of the SW Borneo Block following subduction beneath the Schwaner Mountains in the early Late Cretaceous. After collision of the SW Borneo Block and the microcontinental fragments with Sundaland in the early Late Cretaceous, deep marine sedimentation (Pedawan Formation) ceased, and there was uplift forming the regional Pedawan-Kayan unconformity. Two episodes of extension were responsible for basin development on land from the latest Cretaceous onwards, probably in a strike-slip setting. The first episode formed the Kayan Basin in the Latest Cretaceous (Maastrichtian) to Early Paleocene, and the second formed the Ketungau Basin and the Penrissen Sandstone in the Middle to Late Eocene. Zircons indicate nearby volcanic activity throughout the Early Cenozoic in NW Borneo. Inherited zircon ages indicate an alternation between Borneo and Tin Belt source rocks. A large deep marine basin, the Rajang Basin, formed north of the Lupar Line fault. Zircons from sediments of the Rajang Basin indicate they are of similar age and provenance as the contemporaneous terrestrial sediments to the south suggesting a narrow steep continental Sundaland margin at the

  20. Missing Rings, Synchronous Growth, and Ecological Disturbance in a 36-Year Pitch Pine (Pinus rigida) Provenance Study

    PubMed Central

    Leland, Caroline; Hom, John; Skowronski, Nicholas; Krusic, Paul J.; Cook, Edward R.; Martin-Benito, Dario; Martin-Fernandez, Javier; Pederson, Neil

    2016-01-01

    Provenance studies are an increasingly important analog for understanding how trees adapted to particular climatic conditions might respond to climate change. Dendrochronological analysis can illuminate differences among trees from different seed sources in terms of absolute annual growth and sensitivity to external growth factors. We analyzed annual radial growth of 567 36-year-old pitch pine (Pinus rigida Mill.) trees from 27 seed sources to evaluate their performance in a New Jersey Pine Barrens provenance experiment. Unexpectedly, missing rings were prevalent in most trees, and some years—1992, 1999, and 2006—had a particularly high frequency of missing rings across the plantation. Trees from local seed sources (<55 km away from the plantation) had a significantly smaller percentage of missing rings from 1980–2009 (mean: 5.0%), relative to northernmost and southernmost sources (mean: 9.3% and 7.9%, respectively). Some years with a high frequency of missing rings coincide with outbreaks of defoliating insects or dry growing season conditions. The propensity for missing rings synchronized annual variations in growth across all trees and might have complicated the detection of potential differences in interannual variability among seed sources. Average ring width was significantly larger in seed sources from both the southernmost and warmest origins compared to the northernmost and coldest seed sources in most years. Local seed sources had the highest average radial growth. Adaptation to local environmental conditions and disturbances might have influenced the higher growth rate found in local seed sources. These findings underscore the need to understand the integrative impact of multiple environmental drivers, such as disturbance agents and climate change, on tree growth, forest dynamics, and the carbon cycle. PMID:27182599

  1. Conifer seedling recruitment across a gradient from forest to alpine tundra: effects of species, provenance, and site

    USGS Publications Warehouse

    Castanha, C.; Torn, M.S.; Germino, M.J.; Weibel, B.; Kueppers, L.M.

    2013-01-01

    Background: Seedling germination and survival is a critical control on forest ecosystem boundaries, such as at the alpine–treeline ecotone. In addition, while it is known that species respond individualistically to the same suite of environmental drivers, the potential additional effect of local adaptation on seedling success has not been evaluated. Aims: To determine whether local adaptation may influence the position and movement of forest ecosystem boundaries, we quantified conifer seedling recruitment in common gardens across a subalpine forest to alpine tundra gradient at Niwot Ridge, Colorado, USA. Methods: We studied Pinus flexilis and Picea engelmannii grown from seed collected locally at High (3400 m a.s.l.) and Low (3060 m a.s.l.) elevations. We monitored emergence and survival of seeds sown directly into plots and survival of seedlings germinated indoors and transplanted after snowmelt. Results: Emergence and survival through the first growing season was greater for P. flexilis than P. engelmannii and for Low compared with High provenances. Yet survival through the second growing season was similar for both species and provenances. Seedling emergence and survival tended to be greatest in the subalpine forest and lowest in the alpine tundra. Survival was greater for transplants than for field-germinated seedlings. Conclusions: These results suggest that survival through the first few weeks is critical to the establishment of natural germinants. In addition, even small distances between seed sources can have a significant effect on early demographic performance – a factor that has rarely been considered in previous studies of tree recruitment and species range shifts.

  2. Systemic Lupus Erythematosus and Antineutrophil Cytoplasmic Antibody-Associated Vasculitis Overlap Syndrome in Patients With Biopsy-Proven Glomerulonephritis

    PubMed Central

    Jarrot, Pierre-Andre; Chiche, Laurent; Hervier, Baptiste; Daniel, Laurent; Vuiblet, Vincent; Bardin, Nathalie; Bertin, Daniel; Terrier, Benjamin; Amoura, Zahir; Andrés, Emmanuel; Rondeau, Eric; Hamidou, Mohamed; Pennaforte, Jean-Loup; Halfon, Philippe; Daugas, Eric; Dussol, Bertrand; Puéchal, Xavier; Kaplanski, Gilles; Jourde-Chiche, Noemie

    2016-01-01

    Abstract The aim of the study was to report the clinical, biological, and pathological characteristics of patients with glomerulonephritis (GN) secondary to systemic lupus erythematosus (SLE)/antineutrophil cytoplasmic antibodies (ANCA)-associated vasculitis (AAV) overlap syndrome. A nationwide survey was conducted to identify cases of SLE/AAV overlap syndrome. Data were collected from SLE and AAV French research groups. Inclusion criteria were diagnosis of both SLE and AAV according to international classification criteria and biopsy-proven GN between 1995 and 2014. Additional cases were identified through a systematic literature review. A cohort of consecutive biopsy-proven GN was used to study the prevalence of overlapping antibodies and/or overlap syndrome. The national survey identified 8 cases of SLE/AAV overlap syndrome. All patients were female; median age was 40 years. AAV occurred before SLE (n = 3), after (n = 3), or concomitantly (n = 2). Six patients had rapidly progressive GN and 3/8 had alveolar hemorrhage. All patients had antinuclear antibodies (ANA); 7/8 had p-ANCA antimyeloperoxidase (MPO) antibodies. Renal biopsies showed lupus nephritis (LN) or pauci-immune GN. Remission was obtained in 4/8 patients. A literature review identified 31 additional cases with a similarly severe presentation. In the GN cohort, ANCA positivity was found in 30% of LN, ANA positivity in 52% of pauci-immune GN, with no correlation with pathological findings. The estimated prevalence for SLE/AAV overlap syndrome was 2/101 (2%). In patients with GN, SLE/AAV overlap syndrome may occur but with a low prevalence. Most patients have an aggressive renal presentation, with usually both ANA and anti-MPO antibodies. Further studies are needed to assess shared pathogenesis and therapeutic options. PMID:27258503

  3. Thermostatistics: Proven Energy Savings.

    ERIC Educational Resources Information Center

    Kwasnoski, John

    1983-01-01

    An apparatus simulating residential thermostat control was developed to test claim that lowering house thermostats saves energy and to give students a better understanding of how thermostats work. The apparatus (includes diagram of same) and student activity are described. (JN)

  4. Major and trace elements documented paleoenvironmental and provenance signatures as inferred from the lacustrine sequence of Orog Nuur, southern Mongolia

    NASA Astrophysics Data System (ADS)

    Yu, Kaifeng; Lehmkuhl, Frank; Diekmann, Bernhard; Nottebaum, Veit; Stauch, Georg

    2016-04-01

    In arid realm, due to scarce of continuous terrestrial archives, lacustrine sequences were more often employed as the paleoenvironmental repository. However, there exist numerous spatial and temporal heterogeneities concerning existing studied sites. In the Gobi Desert of southern Mongolia, only two records i.e., Bayan Tohomin Nuur and Ulaan Nuur, were previously reported, neither of them, however, provided records older than ~15 ka. A record that spans longer time period is therefore indispensable to better understand the thermal and hydrologic pattern and their driving mechanisms. Among the suite of the multidisciplinary studies on lacustrine archive, geochemistry appears most likely the promising tool to decipher the interplay between the environmental change, source lithotype and sediment bulk-composition. Considering the late Quaternary lacustrine sediments, the bulk-geochemistry may be controlled by source terranes, authigenic or allothigenic input, which can be altered by the past environment conditions. Knowledge of the bulk-geochemistry downcore variance along with the field investigation and carefully examined geologic mapping will thereby allow us to gain a better understanding of the climate-induced provenance changes throughout the deposition process. On the other hand, surveys considering the bulk-geochemistry and corresponding environmental interpretations in the pelagic realm have been systematically conducted and reviewed, while their counterpart explanations in the lacustrine sediments still need more investigations. Two parallel cores (ONW I, 6.00 m; ONW II, 13.36 m) was retrieved from Orog Nuur, Gobi Desert of southern Mongolia. A suite of high resolution element abundances were examined based on core ONW II in an attempt to gain a better understanding of the paleoenvironment and provenance history of the catchment system over the last ~50 ka. Due to the predominant clay or silty-clay fractions in the lacustrine sediments, Al and Si display

  5. Detrital zircon U-Pb ages of Paleozoic sedimentary rocks from the eastern Hexi Corridor Belt (NW China): Provenance and geodynamic implications

    NASA Astrophysics Data System (ADS)

    Zhao, Xiaochen; Liu, Chiyang; Wang, Jianqiang; Zhao, Yan; Wang, Lei; Zhang, Qihang

    2016-06-01

    The Paleozoic tectonic framework of the eastern Hexi Corridor Belt is ambiguous. However, thick Paleozoic sediments from the eastern Hexi Corridor Belt can provide clues to this problem. In this paper, we deal with the detrital zircon provenance of Middle Ordovician to Late Devonian strata using LA-ICP-MS U-Pb dating, documenting the temporal and spatial changes of provenance. Detrital zircon U-Pb ages indicate that the primary provenance was the Qilian Orogenic Belt and the Alxa Block. However, two samples from Late Devonian strata show different provenance characteristics, from the North Qilian Orogenic Belt, and the Alxa Block and the North China Block, respectively. Different age distributions through time reflect provenance changes due to continuous convergence of the Central Qilian Block and the Alxa Block from the Middle Ordovician to Late Devonian. A significant age cluster ranging from 2000 to 1800 Ma, which is a detrital zircon signature of the North China Block, appeared in the Late Devonian Zhongning Formation. Our preferred interpretation is that the amalgamation of the Alxa Block and the North China Block likely occurred at that time. Moreover, similar Paleozoic fossils, paleolatitudes and detrital zircon distribution indicate that the Hexi Corridor Belt has an affinity to eastern Gondwana.

  6. Simple Modification of the Bladder Outlet Obstruction Index for Better Prediction of Endoscopically-Proven Prostatic Obstruction: A Preliminary Study

    PubMed Central

    Han, Jang Hee; Yu, Ho Song; Lee, Joo Yong; Kim, Joohan; Kang, Dong Hyuk; Kwon, Jong Kyu; Choi, Young Deuk; Cho, Kang Su

    2015-01-01

    Purpose The bladder outlet obstruction index (BOOI), also known as the Abrams-Griffiths (AG) number, is the most widely used index for predicting BOO. However, the obstructed prostatic urethra determined by the BOOI is often inconsistent with endoscopically-proven obstruction. We assessed abdominal straining pattern as a novel parameter for improving the prediction of BOO. Materials and Methods We retrospectively reviewed the pressure-flow studies (PFS) and cystourethroscopy in 176 BPH/LUTS patients who were unresponsive to medical therapy. During PFS, some groups of patients tried to urinate with abdominal straining, which can increases intravesical pressure and underestimate BOOI theoretically. Accordingly, the modified BOOI was defined as (PdetQmax+ΔPabd)-2Qmax. Results Ultimately, 130 patients were eligible for the analysis. In PFS, ΔPabd (PabdQmax-initial Pabd) was 11.81±13.04 cmH2O, and it was 0–9 cmH2O in 75 (57.7%), 10–19 cmH2O in 23 (17.7%) and ≥20 cmH2O in 32 (24.6%) patients. An endoscopically obstructed prostatic urethra in 92 patients was correctly determined in 47 patients (51.1%) by the original BOOI versus 72 patients (78.3%) based on the modified BOOI. Meanwhile, an “unobstructed” urethra according to the original BOOI was present in 11 patients (12.0%), whereas according to the modified BOOI, only 2 (2.1%) would be labeled as “unobstructed”. In receiver operating characteristic curves, the area under the curve was 0.906 using the modified BOOI number versus 0.849 in the original BOOI (p<0.05). Conclusions The change in abdominal pressure was correlated with endoscopically-proven obstruction. Our simple modification of the BOOI on the basis of this finding better predicted bladder outlet obstruction and, therefore, should be considered when evaluating BOO in patients with LUTS/BPH. PMID:26505196

  7. Towards quantitative flux and provenance assessments of riverine suspended sediments: a geochemical investigation of the Fraser River, Canada

    NASA Astrophysics Data System (ADS)

    Voss, B.; Peucker-Ehrenbrink, B.; Venditti, J. G.

    2013-12-01

    Riverine sediments carry a wealth of information about terrestrial processes of erosion and weathering, primary production, and climate in their geochemical composition. Modern riverine sediments and sedimentary deposits in continental shelves, deltas, and lake beds are thus frequently interpreted as records of present and past terrestrial conditions. However, few modern systems have been adequately characterized such that a terrestrial 'end member' composition can be assigned to a given setting, leading to uncertainty in the causes for observed changes in sediment composition. Furthermore, the geochemical signal of a single river's sediment load is a complex product of source contributions from across its basin, as well as transport processes. In order to generate accurate budgets of the quantity (flux) and provenance of basin-integrated riverine suspended sediments, careful sampling across a river channel is required. Studies on a small number of large rivers across the globe have amply demonstrated that hydrodynamic sorting leads to bias in the geochemical composition of particles transported near the river surface versus near the bed. However, appropriate samples characterizing the basin-integrated riverine sediment signal do not exist for most rivers. We present results from the Fraser River in southwestern Canada, which illustrate the variability in modern sediment composition in a system with minimal anthropogenic modification of sediment dispersal (channelization, dam reservoirs). During the 2013 spring freshet on the Fraser River, we collected vertical profiles of point-integrated suspended sediment samples across a 550 m-wide transect of the river ~186 km upstream of the mouth. Sampling was done roughly 1 month after the peak flow (~11,500 m3/s) during a period of sustained high flow (8450 m3/s), when suspended sediment concentrations ranged from 80 - 400 mg/L. These samples, along with simultaneous discharge measurements, allow us to characterize the

  8. Erosion patterns in the Changjiang (Yangtze River) catchment revealed by bulk-sample versus single-mineral provenance budgets

    NASA Astrophysics Data System (ADS)

    Vezzoli, Giovanni; Garzanti, Eduardo; Limonta, Mara; Andò, Sergio; Yang, Shouye

    2016-05-01

    The Changjiang, the fourth longest river on Earth and the largest in Eurasia, has a complex sediment-routing system presently interrupted by the Three Gorges Dam, the world's largest hydroelectric engineering project. To study sediment-generation processes in the huge catchment and compare the different erosion patterns obtained by different methodological approaches, high-resolution petrographic and heavy-mineral analyses were performed on sands from the trunk river and its major tributaries. The frequency distributions of diverse groups of detrital amphiboles were also investigated. Rigorous statistical methods were used to define end-members, evaluate mineralogical variability, assess similarities among samples, and eventually calculate the relative contributions from each major tributary to the trunk river by forward end-member modelling of integrated compositional data. The litho-quartzose sand with few heavy minerals generated in Tibetan headwaters evolves downstream to feldspatho-litho-quartzose with medium-rank metamorphic rock fragments and moderately rich amphibole-epidote suites. Sand across the Sichuan basin and as far as the Three Gorges Dam is enriched in mafic volcanic, clinopyroxene, and carbonate grains eroded from Permian basalts and Paleozoic strata of the South China Block. The final (Yangtze) tract is characterized by litho-feldspatho-quartzose sand with moderately poor, amphibole-dominated suites with epidote, clinopyroxene, and garnet. The orogenic compositional signature acquired in the upper part of the basin is thus carried all the way to the Chinese passive margin, as observed also for the Yellow River in the north. Even after long-distance transport across wide continental areas, detrital modes thus reveal the tectonic character of the source rather than the geodynamic environment of the sink. Quantitative provenance analysis indicates that left-bank tributaries draining the Longmen and Qinlin mountains supply most of the sand reaching

  9. Provenance of Modern Soils and Limestone and Chert Bedrock of Middle Tennessee Assessed Using Detrital Zircon U-Pb Geochronology

    NASA Astrophysics Data System (ADS)

    Ayers, J. C.; Katsiaficas, N. J.; Wang, X.

    2014-12-01

    Relatively thick soils mantle limestone bedrock throughout much of middle TN. Detrital zircon U-Pb geochronology was used to test two hypotheses: 1) That soil formed by accumulation of insoluble residue during chemical weathering of "dirty" limestone bedrock. 2) That an exotic component, perhaps wind-blown loess, was deposited and weathered to form soil. Samples of soil and underlying bedrock were collected from flat surfaces at the tops of cliffs. At Site 1 the Mississippian cherty limestone of the Fort Payne Formation was collected along with the B1 and B2 horizons of the overlying ultisol. At Site 2 a composite sample of A and B horizons of an alfisol and a sample of the underlying Ordovician limestone of the Hermitage Formation were collected. Zircon was recovered from soil and limestone samples, imaged using cathodoluminescence, and analyzed for trace elements and U-Pb isotopes using a 193 nm laser and quadrupole ICP-MS. Discordant analyses were discarded and 206Pb/238U ages are reported. Trace element concentrations and ratios in zircon seem to not be useful as provenance indicators. However, comparison of U-Pb age spectra showed that soils at both sites predominantly formed by weathering of limestone, with a small exotic component. The Hermitage has significant age peaks at ~1330, 1043, 955 and 439 Ma, and its overlying soil has age peaks at 1410, 1235, 1036 and 442 Ma. The age spectra are significantly different (Kolmogorov-Smirnov probability P = 0.01 < 0.05 significance). The Fort Payne has age peaks at ~1253, 967 and 417 Ma, while the B1 has age peaks at 1440, 1182, 1012 and 450 Ma (K-S P = 0.051) and the B2 at 1240, 941, 362, 81 and 33 Ma (K-S P = 0.073). The young ages in B2 require an exotic component that may account for ~25% of the measured ages. The source of the exotic material has not yet been identified, but its zircon age spectrum does not match previously published age spectra for the regional Pleistocene Peoria loess. Bedrock age peaks

  10. Impact of sedimentary provenance and weathering on arsenic distribution in aquifers of the Datong basin, China: Constraints from elemental geochemistry

    SciTech Connect

    Xie, Xianjun; Wang, Yanxin; Ellis, Andre; Liu, Chongxuan; Duan, Mengyu; Li, Junxia

    2014-11-01

    Arsenic (As)-contaminated aquifer sediments from Datong basin, China have been analyzed to infer the provenance and depositional environment related to As distribution in the aquifer sediments. The As content in the sediments ranged from 2.45 to 27.38 mg/kg with an average value of 9.54 mg/kg, which is comparable to the average value in modern unconsolidated sediments. However, minor variation in As concentration with depth has been observed in the core. There was a significant correlation between Fe, and Al and As, which was attributed to the adsorption or co-precipitation of As onto/with Fe oxides/hydroxides and/or Fe-coated clay minerals. Post-Archean Australian Shale (PAAS)-normalized REEs patterns of sediment samples along the borehole were constant, and the sediments had a notably restricted range of La-N/Yb-N ratios from 0.7 to 1.0. These results suggested that the provenance of the Datong basin remained similar throughout the whole depositional period. The analysis of major geochemical compositions confirmed that all core sediments were from the same sedimentary source and experienced significant sedimentary recycling. The co-variation of As, V/Al, Ni/Al and chemical index of alteration (CIA) values in the sediments along the borehole suggested that As distribution in the sediments was primarily controlled by weathering processes. The calculated CIA values of the sediments along the borehole indicate that a relative strong chemical weathering occurred during the deposition of sediments at depths of similar to 35 to 88 m, which was corresponding to the depth at which high As groundwater was observed at the site. Strong chemical weathering favored the deposition of Fe-bearing minerals including poorly crystalline and crystalline Fe oxide mineral phases and concomitant co-precipitation of As with these minerals in the sediments. Subsequent reductive dissolution of As-bearing poorly crystalline and crystalline Fe oxides would result in the enrichment of As in

  11. Multielement composition of wines and their precursors including provenance soil and their potentialities as fingerprints of wine origin.

    PubMed

    Almeida, C Marisa R; Vasconcelos, M Teresa S D

    2003-07-30

    The influence of the provenance soil and vinification process on the wine multielemental composition was investigated. For this purpose, two different vineyards from the Douro wine district, Portugal, were selected. Monovarietal grapes from a 10 year old vineyard were used to produce a red table wine, in a very modern winery. Polyvarietal grapes from a 60-70 year old vineyard were used to produce a red fortified wine, similar to Port, through a traditional vinification process. The multielement compositions (Al, As, B, Ba, Be, Ca, Cd, Co, Cr, Cs, Cu, Fe, Ga, Hf, Li, Mn, Mo, Nb, Ni, Pb, Rb, Sb, Sc, Sr, Ti, Th, Tl, U, V, W, Y, Zn, Zr, La, Ce, Pr, Nd, Sm, Eu, Gd, Tb, Dy, Ho, Er, Tm, Yb, and Lu) of soil, grape juices (prepared in the laboratory), and samples collected in the different steps of each winemaking process were measured. Inductively coupled plasma mass spectrometry was used, after suitable pretreatment of the samples (by UV irradiation for liquid samples and high-pressure microwave digestion for soil). Both vinification processes influenced the multielement composition of the wines. Most of the elements presented similar or even lower concentrations in the wine as compared to that observed in the respective grape juice, probably as a result of precipitation or coprecipitation with suspended particles during fermentation and/or wine aging. Evidence of effective contamination during grape pressing, fermentation, and/or fining of wines (depending on the element) was observed for Cd, Cr, Cu, Fe, Ni, Pb, V, and Zn in the fortified wine and Al, Cr, Fe, Ni, Pb, and V in the table wine. Nevertheless, significant correlations were obtained between the multielement composition of the wine and the respective grape juice (R = 0.997 and 0.979 for the fortified and table wines, respectively, n = 31, P < 0.01), as well as between that in the wine (median of the two studied wines) and the provenance soil (R = 0.994, n = 19, P < 0.01), for the set of elements determined in

  12. Using Detrital Geochronologic and Thermochronologic "Double-Dating" to Constrain Depositional Age, Provenance, and Exhumation Signals in Ancient Forearc Basins

    NASA Astrophysics Data System (ADS)

    Orme, D. A.

    2014-12-01

    The application of coupled detrital zircon U-Pb geochronology and (U-Th)/He thermochronology to sedimentary basins has the potential for unprecedented details about grain provenance, depositional age and source and basin exhumation signals. Although several studies have implored this technique, it is underutilized and may prove useful in geologic settings that are traditionally difficult to explore. For example, constraining the depositional age of strata in ancient forearc basins is challenging as many horizons are devoid of fossils and post-burial diagenesis of limestone beds limits biostratigraphic age control. This study applies U-Pb detrital zircon geochronology to clastic rocks from the Cretaceous-Eocene Xigaze forearc basin in southern Tibet to (1) to determine the provenance of forearc basin strata and (2) to constrain a maximum depositional age of stratigraphic horizons using the youngest distinct age group from a sample. In addition, (U-Th)/He thermochronology was applied to a subset of the detrital zircons on which U-Pb ages were previously determined in order to determine the timing of exhumation of Xigaze forearc strata and its source region. The use of young populations of zircons is a good method for age control in the Xigaze forearc basin because magmatism in the source area was more-or-less continuous and the lag time between the youngest zircons in a sample and the time of that samples deposition is likely relatively small. A total of 2,330 zircon grains yielded ages with acceptable precision and concordance for geochronologic interpretation. Together with sandstone petrography, the detrital zircons indicate that the primary source of detritus in the basin from ~113 to 54 Ma was the Gangdese magmatic arc. Analysis of the youngest age component of individual samples reveals a decrease in the youngest ages upsection, consistent with maximum depositional ages that are close to the likely true depositional age based on intervening tuff layers. Double

  13. Impact of sedimentary provenance and weathering on arsenic distribution in aquifers of the Datong basin, China: Constraints from elemental geochemistry

    NASA Astrophysics Data System (ADS)

    Xie, Xianjun; Wang, Yanxin; Ellis, Andre; Liu, Chongxuan; Duan, Mengyu; Li, Junxia

    2014-11-01

    Arsenic (As)-contaminated aquifer sediments from Datong basin, China have been analyzed to infer the provenance and depositional environment related to As distribution in the aquifer sediments. The As content in the sediments ranged from 2.45 to 27.38 mg/kg with an average value of 9.54 mg/kg, which is comparable to the average value in modern unconsolidated sediments. However, minor variation in As concentration with depth has been observed in the core. There was a significant correlation between Fe, and Al and As, which was attributed to the adsorption or co-precipitation of As onto/with Fe oxides/hydroxides and/or Fe-coated clay minerals. Post-Archean Australian Shale (PAAS)-normalized REEs patterns of sediment samples along the borehole were constant, and the sediments had a notably restricted range of LaN/YbN ratios from 0.7 to 1.0. These results suggested that the provenance of the Datong basin remained similar throughout the whole depositional period. The analysis of major geochemical compositions confirmed that all core sediments were from the same sedimentary source and experienced significant sedimentary recycling. The co-variation of As, V/Al, Ni/Al and chemical index of alteration (CIA) values in the sediments along the borehole suggested that As distribution in the sediments was primarily controlled by weathering processes. The calculated CIA values of the