Spatial Dependence and Heterogeneity in Bayesian Factor Analysis: A Cross-National Investigation of Schwartz Values

ERIC Educational Resources Information Center

Stakhovych, Stanislav; Bijmolt, Tammo H. A.; Wedel, Michel

2012-01-01

In this article, we present a Bayesian spatial factor analysis model. We extend previous work on confirmatory factor analysis by including geographically distributed latent variables and accounting for heterogeneity and spatial autocorrelation. The simulation study shows excellent recovery of the model parameters and demonstrates the consequences…

The Field of View is More Useful in Golfers than Regular Exercisers

PubMed Central

Murphy, Karen

2017-01-01

Superior visual attention skills are vital for excellent sports performance. This study used a cognitive skills approach to examine expert and novice differences in a visual spatial attention task. Thirty-two males aged 18 to 42 years completed this study in return for course credit or monetary incentive. Participants were expert golfers (N = 18) or exercise controls (N = 14). Spatial attention was assessed using the useful field of view task which required participants to locate a target shown 10°, 20°, and 30° of eccentricity from centre in very brief presentations. At each degree of eccentricity, golfers were more accurate at locating the target than the exercise controls. These results provide support for the broad transfer hypothesis by demonstrating a link between golf expertise and better performance on an objective measure of spatial attention skills. Therefore, it appears that sports expertise can transfer to expertise in non-sport related tasks. PMID:28450973

Plasmonics simulations including nonlocal effects using a boundary element method approach

NASA Astrophysics Data System (ADS)

Trügler, Andreas; Hohenester, Ulrich; García de Abajo, F. Javier

2017-09-01

Spatial nonlocality in the photonic response of metallic nanoparticles is actually known to produce near-field quenching and significant plasmon frequency shifts relative to local descriptions. As the control over size and morphology of fabricated nanostructures is truly reaching the nanometer scale, understanding and accounting for nonlocal phenomena is becoming increasingly important. Recent advances clearly point out the need to go beyond the local theory. We here present a general formalism for incorporating spatial dispersion effects through the hydrodynamic model and generalizations for arbitrary surface morphologies. Our method relies on the boundary element method, which we supplement with a nonlocal interaction potential. We provide numerical examples in excellent agreement with the literature for individual and paired gold nanospheres, and critically examine the accuracy of our approach. The present method involves marginal extra computational cost relative to local descriptions and facilitates the simulation of spatial dispersion effects in the photonic response of complex nanoplasmonic structures.

A Hybrid Circuit for Spoof Surface Plasmons and Spatial Waveguide Modes to Reach Controllable Band-Pass Filters

PubMed Central

Zhang, Qian; Zhang, Hao Chi; Wu, Han; Cui, Tie Jun

2015-01-01

We propose a hybrid circuit for spoof surface plasmon polaritons (SPPs) and spatial waveguide modes to develop new microwave devices. The hybrid circuit includes a spoof SPP waveguide made of two anti-symmetric corrugated metallic strips and a traditional substrate integrated waveguide (SIW). From dispersion relations, we show that the electromagnetic waves only can propagate through the hybrid circuit when the operating frequency is less than the cut-off frequency of the SPP waveguide and greater than the cut-off frequency of SIW, generating efficient band-pass filters. We demonstrate that the pass band is controllable in a large range by designing the geometrical parameters of SPP waveguide and SIW. Full-wave simulations are provided to show the large adjustability of filters, including ultra wideband and narrowband filters. We fabricate a sample of the new hybrid device in the microwave frequencies, and measurement results have excellent agreements to numerical simulations, demonstrating excellent filtering characteristics such as low loss, high efficiency, and good square ratio. The proposed hybrid circuit gives important potential to accelerate the development of plasmonic integrated functional devices and circuits in both microwave and terahertz frequencies. PMID:26552584

A Hybrid Circuit for Spoof Surface Plasmons and Spatial Waveguide Modes to Reach Controllable Band-Pass Filters.

PubMed

Zhang, Qian; Zhang, Hao Chi; Wu, Han; Cui, Tie Jun

2015-11-10

We propose a hybrid circuit for spoof surface plasmon polaritons (SPPs) and spatial waveguide modes to develop new microwave devices. The hybrid circuit includes a spoof SPP waveguide made of two anti-symmetric corrugated metallic strips and a traditional substrate integrated waveguide (SIW). From dispersion relations, we show that the electromagnetic waves only can propagate through the hybrid circuit when the operating frequency is less than the cut-off frequency of the SPP waveguide and greater than the cut-off frequency of SIW, generating efficient band-pass filters. We demonstrate that the pass band is controllable in a large range by designing the geometrical parameters of SPP waveguide and SIW. Full-wave simulations are provided to show the large adjustability of filters, including ultra wideband and narrowband filters. We fabricate a sample of the new hybrid device in the microwave frequencies, and measurement results have excellent agreements to numerical simulations, demonstrating excellent filtering characteristics such as low loss, high efficiency, and good square ratio. The proposed hybrid circuit gives important potential to accelerate the development of plasmonic integrated functional devices and circuits in both microwave and terahertz frequencies.

Observing outer planet satellites (except Titan) with JWST: Science justification and observational requirements

USGS Publications Warehouse

Kestay, Laszlo P.; Grundy, Will; Stansberry, John; Sivaramakrishnan, Anand; Thatte, Deepashri; Gudipati, Murthy; Tsang, Constantine; Greenbaum, Alexandra; McGruder, Chima

2016-01-01

The James Webb Space Telescope (JWST) will allow observations with a unique combination of spectral, spatial, and temporal resolution for the study of outer planet satellites within our Solar System. We highlight the infrared spectroscopy of icy moons and temporal changes on geologically active satellites as two particularly valuable avenues of scientific inquiry. While some care must be taken to avoid saturation issues, JWST has observation modes that should provide excellent infrared data for such studies.

GATE simulation of a new design of pinhole SPECT system for small animal brain imaging

NASA Astrophysics Data System (ADS)

Uzun Ozsahin, D.; Bläckberg, L.; El Fakhri, G.; Sabet, H.

2017-01-01

Small animal SPECT imaging has gained an increased interest over the past decade since it is an excellent tool for developing new drugs and tracers. Therefore, there is a huge effort on the development of cost-effective SPECT detectors with high capabilities. The aim of this study is to simulate the performance characteristics of new designs for a cost effective, stationary SPECT system dedicated to small animal imaging with a focus on mice brain. The conceptual design of this SPECT system platform, Stationary Small Animal SSA-SPECT, is to use many pixelated CsI:TI detector modules with 0.4 mm × 0.4 mm pixels in order to achieve excellent intrinsic detector resolution where each module is backed by a single pinhole collimator with 0.3 mm hole diameter. In this work, we present the simulation results of four variations of the SSA-SPECT platform where the number of detector modules and FOV size is varied while keeping the detector size and collimator hole size constant. Using the NEMA NU-4 protocol, we performed spatial resolution, sensitivity, image quality simulations followed by a Derenzo-like phantom evaluation. The results suggest that all four SSA-SPECT systems can provide better than 0.063% system sensitivity and < 1.5 mm FWHM spatial resolution without resolution recovery or other correction techniques. Specifically, SSA-SPECT-1 showed a system sensitivity of 0.09% in combination with 1.1 mm FWHM spatial resolution.

Visualization of spatial-temporal data based on 3D virtual scene

NASA Astrophysics Data System (ADS)

Wang, Xianghong; Liu, Jiping; Wang, Yong; Bi, Junfang

2009-10-01

The main purpose of this paper is to realize the expression of the three-dimensional dynamic visualization of spatialtemporal data based on three-dimensional virtual scene, using three-dimensional visualization technology, and combining with GIS so that the people's abilities of cognizing time and space are enhanced and improved by designing dynamic symbol and interactive expression. Using particle systems, three-dimensional simulation, virtual reality and other visual means, we can simulate the situations produced by changing the spatial location and property information of geographical entities over time, then explore and analyze its movement and transformation rules by changing the interactive manner, and also replay history and forecast of future. In this paper, the main research object is the vehicle track and the typhoon path and spatial-temporal data, through three-dimensional dynamic simulation of its track, and realize its timely monitoring its trends and historical track replaying; according to visualization techniques of spatialtemporal data in Three-dimensional virtual scene, providing us with excellent spatial-temporal information cognitive instrument not only can add clarity to show spatial-temporal information of the changes and developments in the situation, but also be used for future development and changes in the prediction and deduction.

Multi-scale approach for predicting fish species distributions across coral reef seascapes.

PubMed

Pittman, Simon J; Brown, Kerry A

2011-01-01

Two of the major limitations to effective management of coral reef ecosystems are a lack of information on the spatial distribution of marine species and a paucity of data on the interacting environmental variables that drive distributional patterns. Advances in marine remote sensing, together with the novel integration of landscape ecology and advanced niche modelling techniques provide an unprecedented opportunity to reliably model and map marine species distributions across many kilometres of coral reef ecosystems. We developed a multi-scale approach using three-dimensional seafloor morphology and across-shelf location to predict spatial distributions for five common Caribbean fish species. Seascape topography was quantified from high resolution bathymetry at five spatial scales (5-300 m radii) surrounding fish survey sites. Model performance and map accuracy was assessed for two high performing machine-learning algorithms: Boosted Regression Trees (BRT) and Maximum Entropy Species Distribution Modelling (MaxEnt). The three most important predictors were geographical location across the shelf, followed by a measure of topographic complexity. Predictor contribution differed among species, yet rarely changed across spatial scales. BRT provided 'outstanding' model predictions (AUC = >0.9) for three of five fish species. MaxEnt provided 'outstanding' model predictions for two of five species, with the remaining three models considered 'excellent' (AUC = 0.8-0.9). In contrast, MaxEnt spatial predictions were markedly more accurate (92% map accuracy) than BRT (68% map accuracy). We demonstrate that reliable spatial predictions for a range of key fish species can be achieved by modelling the interaction between the geographical location across the shelf and the topographic heterogeneity of seafloor structure. This multi-scale, analytic approach is an important new cost-effective tool to accurately delineate essential fish habitat and support conservation prioritization in marine protected area design, zoning in marine spatial planning, and ecosystem-based fisheries management.

The Oxford SWIFT Spectrograph: first commissioning and on-sky results

NASA Astrophysics Data System (ADS)

Thatte, Niranjan; Tecza, Mathias; Clarke, Fraser; Goodsall, Timothy; Fogarty, Lisa; Houghton, Ryan; Salter, Graeme; Scott, Nicholas; Davies, Roger L.; Bouchez, Antonin; Dekany, Richard

2010-07-01

The Oxford SWIFT spectrograph, an I & z band (6500-10500 A) integral field spectrograph, is designed to operate as a facility instrument at the 200 inch Hale Telescope on Palomar Mountain, in conjunction with the Palomar laser guide star adaptive optics system PALAO (and its upgrade to PALM3000). SWIFT provides spectra at R(≡λ/▵λ)~4000 of a contiguous two-dimensional field, 44 x 89 spatial pixels (spaxels) in size, at spatial scales of 0.235", 0.16", and 0.08" per spaxel. It employs two 250μm thick, fully depleted, extremely red sensitive 4k X 2k CCD detector arrays (manufactured by LBNL) that provide excellent quantum efficiency out to 1000 nm. We describe the commissioning observations and present the measured values of a number of instrument parameters. We also present some first science results that give a taste of the range of science programs where SWIFT can have a substantial impact.

Profiling of Atmospheric Water Vapor with MIR and LASE

NASA Technical Reports Server (NTRS)

Wang, J. R.; Racette, P.; Triesly, M. E.; Browell, E. V.; Ismail, S.; Chang, L. A.; Hildebrand, Peter H. (Technical Monitor)

2001-01-01

This paper presents the first and the only simultaneous measurements of water vapor by MIR (Millimeter-wave Imaging Radiometer) and LASE (Lidar Atmospheric Sounding Experiment) on board the same ER-2 aircraft. Water vapor is one of the most important constituents in the Earth's atmosphere, as its spatial and temporal variations affect a wide spectrum of meteorological phenomena ranging from the formation of clouds to the development of severe storms. Its concentration, as measured in terms of relative humidity, determines the extinction coefficient of atmospheric aerosol particles and therefore visibility. These considerations point to the need for effective and frequent measurements of the atmospheric water vapor. The MIR and LASE instruments provide measurements of water vapor profiles with two markedly different techniques. LASE can give water vapor profiles with excellent vertical resolution under clear condition, while MIR can retrieve water vapor profiles with a crude vertical resolution even under a moderate cloud cover. Additionally, millimeter-wave measurements are relatively simple and provide better spatial coverage.

GLASS: spatially resolved spectroscopy of lensed galaxies in the Frontier Fields

NASA Astrophysics Data System (ADS)

Jones, Tucker; Treu, Tommaso; Brammer, Gabriel; Borello Schmidt, Kasper; Malkan, Matthew A.

2015-08-01

The Grism Lens-Amplified Survey from Space (GLASS) has obtained slitless near-IR spectroscopy of 10 galaxy clusters selected for their strong lensing properties, including all six Hubble Frontier Fields. Slitless grism spectra are ideal for mapping emission lines such as [O II], [O III], and H alpha at z=1-3. The combination of strong gravitational lensing and HST's diffraction limit provides excellent sensitivity with spatial resolution as fine as 100 pc for highly magnified sources, and ~500 pc for less magnified sources near the edge of the field of view. The GLASS survey represents the largest spectroscopic sample with such high resolution at z>1. GLASS and Hubble Frontier Field data provide the distribution of stellar mass, star formation, gas-phase metallicity, and other aspects of the physical structure of high redshift galaxies, reaching unprecedented stellar masses as low as ~10^7 Msun at z=2. I will discuss precise measurements of these physical properties and implications for galaxy evolution.

Spatially resolved spectroscopy of lensed galaxies in the Frontier Fields

NASA Astrophysics Data System (ADS)

Jones, Tucker; Aff004

The Grism Lens-Amplified Survey from Space (GLASS) has obtained slitless near-infrared spectroscopy of 10 galaxy clusters selected for their strong lensing properties, including all six Hubble Frontier Fields. Slitless grism spectra are ideal for mapping emission lines such as [O ii], [O iii], and Hα at z=1-3. The combination of strong gravitational lensing and Hubble's diffraction limit provides excellent sensitivity with spatial resolution as fine as 100 pc for highly magnified sources, and ~500 pc for less magnified sources near the edge of the field of view. The GLASS survey represents the largest spectroscopic sample with such high resolution at z > 1. GLASS and Hubble Frontier Field data provide the distribution of stellar mass, star formation, gas-phase metallicity, and other aspects of the physical structure of high redshift galaxies, reaching stellar masses as low as ~107 M⊙ at z=2. I discuss precise measurements of these physical properties and implications for galaxy evolution.

Edge directed image interpolation with Bamberger pyramids

NASA Astrophysics Data System (ADS)

Rosiles, Jose Gerardo

2005-08-01

Image interpolation is a standard feature in digital image editing software, digital camera systems and printers. Classical methods for resizing produce blurred images with unacceptable quality. Bamberger Pyramids and filter banks have been successfully used for texture and image analysis. They provide excellent multiresolution and directional selectivity. In this paper we present an edge-directed image interpolation algorithm which takes advantage of the simultaneous spatial-directional edge localization at the subband level. The proposed algorithm outperform classical schemes like bilinear and bicubic schemes from the visual and numerical point of views.

Getting the Big Picture: Design Considerations for a ngVLA Short Spacing Array

NASA Astrophysics Data System (ADS)

Mason, Brian Scott; Cotton, William; Condon, James; Kepley, Amanda; Selina, Rob; Murphy, Eric Joseph

2018-01-01

The Next Generation VLA (ngVLA) aims to provide a revolutionary increase in cm-wavelength collecting area and sensitivity while at the same time providing excellent image fidelity for a broad spectrum of science cases. Likely ngVLA configurations currently envisioned provide sensitivity over a very wide range of spatial scales. The antenna diameter (notionally 18 meters) fundamentally limits the largest angular scales that can be reached. One simple and powerful way to image larger angular scales is to build a complementary interferometer comprising a smaller number of smaller-diameter dishes.We have investigated the requirements that such an array would need to meet in order to usefully scientifically complement the ngVLA; this poster presents the results of our investigation.

Construction of a 3-D anatomical model for teaching temporal lobectomy.

PubMed

de Ribaupierre, Sandrine; Wilson, Timothy D

2012-06-01

Although we live and work in 3 dimensional space, most of the anatomical teaching during medical school is done on 2-D (books, TV and computer screens, etc). 3-D spatial abilities are essential for a surgeon but teaching spatial skills in a non-threatening and safe educational environment is a much more difficult pedagogical task. Currently, initial anatomical knowledge formation or specific surgical anatomy techniques, are taught either in the OR itself, or in cadaveric labs; which means that the trainee has only limited exposure. 3-D computer models incorporated into virtual learning environments may provide an intermediate and key step in a blended learning approach for spatially challenging anatomical knowledge formation. Specific anatomical structures and their spatial orientation can be further clinically contextualized through demonstrations of surgical procedures in the 3-D digital environments. Recordings of digital models enable learner reviews, taking as much time as they want, stopping the demonstration, and/or exploring the model to understand the anatomical relation of each structure. We present here how a temporal lobectomy virtual model has been developed to aid residents and fellows conceptualization of the anatomical relationships between different cerebral structures during that procedure. We suggest in comparison to cadaveric dissection, such virtual models represent a cost effective pedagogical methodology providing excellent support for anatomical learning and surgical technique training. Copyright © 2012 Elsevier Ltd. All rights reserved.

Programmable DNA scaffolds for spatially-ordered protein assembly

NASA Astrophysics Data System (ADS)

Chandrasekaran, Arun Richard

2016-02-01

Ever since the notion of using DNA as a material was realized, it has been employed in the construction of complex structures that facilitate the assembly of nanoparticles or macromolecules with nanometer-scale precision. Specifically, tiles fashioned from DNA strands and DNA origami sheets have been shown to be suitable as scaffolds for immobilizing proteins with excellent control over their spatial positioning. Supramolecular assembly of proteins into periodic arrays in one or more dimensions is one of the most challenging aspects in the design of scaffolds for biomolecular investigations and macromolecular crystallization. This review provides a brief overview of how various biomolecular interactions with high degree of specificity such as streptavidin-biotin, antigen-antibody, and aptamer-protein interactions have been used to fabricate linear and multidimensional assemblies of structurally intact and functional proteins. The use of DNA-binding proteins as adaptors, polyamide recognition on DNA scaffolds and oligonucleotide linkers for protein assembly are also discussed.Ever since the notion of using DNA as a material was realized, it has been employed in the construction of complex structures that facilitate the assembly of nanoparticles or macromolecules with nanometer-scale precision. Specifically, tiles fashioned from DNA strands and DNA origami sheets have been shown to be suitable as scaffolds for immobilizing proteins with excellent control over their spatial positioning. Supramolecular assembly of proteins into periodic arrays in one or more dimensions is one of the most challenging aspects in the design of scaffolds for biomolecular investigations and macromolecular crystallization. This review provides a brief overview of how various biomolecular interactions with high degree of specificity such as streptavidin-biotin, antigen-antibody, and aptamer-protein interactions have been used to fabricate linear and multidimensional assemblies of structurally intact and functional proteins. The use of DNA-binding proteins as adaptors, polyamide recognition on DNA scaffolds and oligonucleotide linkers for protein assembly are also discussed. Dedicated to my advisor Ned Seeman on the occasion of his 70th birthday.

Short-term memory stores organized by information domain.

PubMed

Noyce, Abigail L; Cestero, Nishmar; Shinn-Cunningham, Barbara G; Somers, David C

2016-04-01

Vision and audition have complementary affinities, with vision excelling in spatial resolution and audition excelling in temporal resolution. Here, we investigated the relationships among the visual and auditory modalities and spatial and temporal short-term memory (STM) using change detection tasks. We created short sequences of visual or auditory items, such that each item within a sequence arose at a unique spatial location at a unique time. On each trial, two successive sequences were presented; subjects attended to either space (the sequence of locations) or time (the sequence of inter item intervals) and reported whether the patterns of locations or intervals were identical. Each subject completed blocks of unimodal trials (both sequences presented in the same modality) and crossmodal trials (Sequence 1 visual, Sequence 2 auditory, or vice versa) for both spatial and temporal tasks. We found a strong interaction between modality and task: Spatial performance was best on unimodal visual trials, whereas temporal performance was best on unimodal auditory trials. The order of modalities on crossmodal trials also mattered, suggesting that perceptual fidelity at encoding is critical to STM. Critically, no cost was attributable to crossmodal comparison: In both tasks, performance on crossmodal trials was as good as or better than on the weaker unimodal trials. STM representations of space and time can guide change detection in either the visual or the auditory modality, suggesting that the temporal or spatial organization of STM may supersede sensory-specific organization.

To Think Spatially and Environmentally, Put on Your Geography Sunglasses!

ERIC Educational Resources Information Center

Jones, Mark C.

2016-01-01

Educators need to teach the geographic perspective because spatial and environmental thinking are central to understanding how the earth changes. In the more narrow interest of helping students to excel in school, it is impossible to teach students every possible example that they might encounter on an exam. How to teach perspectives and skills is…

Spatial access priority mapping (SAPM) with fishers: a quantitative GIS method for participatory planning.

PubMed

Yates, Katherine L; Schoeman, David S

2013-01-01

Spatial management tools, such as marine spatial planning and marine protected areas, are playing an increasingly important role in attempts to improve marine management and accommodate conflicting needs. Robust data are needed to inform decisions among different planning options, and early inclusion of stakeholder involvement is widely regarded as vital for success. One of the biggest stakeholder groups, and the most likely to be adversely impacted by spatial restrictions, is the fishing community. In order to take their priorities into account, planners need to understand spatial variation in their perceived value of the sea. Here a readily accessible, novel method for quantitatively mapping fishers' spatial access priorities is presented. Spatial access priority mapping, or SAPM, uses only basic functions of standard spreadsheet and GIS software. Unlike the use of remote-sensing data, SAPM actively engages fishers in participatory mapping, documenting rather than inferring their priorities. By so doing, SAPM also facilitates the gathering of other useful data, such as local ecological knowledge. The method was tested and validated in Northern Ireland, where over 100 fishers participated in a semi-structured questionnaire and mapping exercise. The response rate was excellent, 97%, demonstrating fishers' willingness to be involved. The resultant maps are easily accessible and instantly informative, providing a very clear visual indication of which areas are most important for the fishers. The maps also provide quantitative data, which can be used to analyse the relative impact of different management options on the fishing industry and can be incorporated into planning software, such as MARXAN, to ensure that conservation goals can be met at minimum negative impact to the industry. This research shows how spatial access priority mapping can facilitate the early engagement of fishers and the ready incorporation of their priorities into the decision-making process in a transparent, quantitative way.

A novel tablet computer platform for advanced language mapping during awake craniotomy procedures.

PubMed

Morrison, Melanie A; Tam, Fred; Garavaglia, Marco M; Golestanirad, Laleh; Hare, Gregory M T; Cusimano, Michael D; Schweizer, Tom A; Das, Sunit; Graham, Simon J

2016-04-01

A computerized platform has been developed to enhance behavioral testing during intraoperative language mapping in awake craniotomy procedures. The system is uniquely compatible with the environmental demands of both the operating room and preoperative functional MRI (fMRI), thus providing standardized testing toward improving spatial agreement between the 2 brain mapping techniques. Details of the platform architecture, its advantages over traditional testing methods, and its use for language mapping are described. Four illustrative cases demonstrate the efficacy of using the testing platform to administer sophisticated language paradigms, and the spatial agreement between intraoperative mapping and preoperative fMRI results. The testing platform substantially improved the ability of the surgeon to detect and characterize language deficits. Use of a written word generation task to assess language production helped confirm areas of speech apraxia and speech arrest that were inadequately characterized or missed with the use of traditional paradigms, respectively. Preoperative fMRI of the analogous writing task was also assistive, displaying excellent spatial agreement with intraoperative mapping in all 4 cases. Sole use of traditional testing paradigms can be limiting during awake craniotomy procedures. Comprehensive assessment of language function will require additional use of more sophisticated and ecologically valid testing paradigms. The platform presented here provides a means to do so.

Homogeneity of the coefficient of linear thermal expansion of ZERODUR: a review of a decade of evaluations

NASA Astrophysics Data System (ADS)

Jedamzik, Ralf; Westerhoff, Thomas

2017-09-01

The coefficient of thermal expansion (CTE) and its spatial homogeneity from small to large formats is the most important property of ZERODUR. Since more than a decade SCHOTT has documented the excellent CTE homogeneity. It started with reviews of past astronomical telescope projects like the VLT, Keck and GTC mirror blanks and continued with dedicated evaluations of the production. In recent years, extensive CTE measurements on samples cut from randomly selected single ZERODUR parts in meter size and formats of arbitrary shape, large production boules and even 4 m sized blanks have demonstrated the excellent CTE homogeneity in production. The published homogeneity data shows single ppb/K peak to valley CTE variations on medium spatial scale of several cm down to small spatial scale of only a few mm mostly at the limit of the measurement reproducibility. This review paper summarizes the results also in respect to the increased CTE measurement accuracy over the last decade of ZERODUR production.

Holographic Recordings in Dye/Polymer Systems For Engineering Applications

NASA Astrophysics Data System (ADS)

Lessard, Roger A.; Couture, Jean J.

1990-04-01

Since Gabor's first demonstration of reconstructed wavefronts, many holographic techniques provided interesting tools and applications. Presently the future of holography is strongly dependent upon new holographic recording thin films. Because of their excellent responses to high spatial frequency grating recordings (up to 6800 cycles/mm), photopolymers and photocrosslinking materials seem to be good candidates to overcome some limitations. Dichromated gelatin films demons-trated excellent properties for permanent recording grating applications like HOE construction but they are humidity sensitive and they need a chemical development. Today's holographic works need real-time like recording material and law cost organic materials as DYE/POLYMER systems offer some possibilities. We present a review of research works done in our holography laboratories of COPL at Universite Laval. Using an automated spatial frequency analyzer designed at COPL, DYE/POLYMER systems are characterized for transmission holography and also for applications involving real-time holography and four-wave mixing techniques. Also, most of our characterization studies consider volume polarization holograms. The second subject is devoted to polarization hologram recordings in thin colored polyvinyl alcohol films. Those AZO/WA solid films are erasable and can be used for many thousands duty cycles for polarization volume holograms. Holographic characterization studies are conducted in order to know best experimental conditions and applications that allow to use those films. Finally, sensitized PVA films will be discussed.

3D Holographic Observatory for Long-term Monitoring of Complex Behaviors in Drosophila

NASA Astrophysics Data System (ADS)

Kumar, S. Santosh; Sun, Yaning; Zou, Sige; Hong, Jiarong

2016-09-01

Drosophila is an excellent model organism towards understanding the cognitive function, aging and neurodegeneration in humans. The effects of aging and other long-term dynamics on the behavior serve as important biomarkers in identifying such changes to the brain. In this regard, we are presenting a new imaging technique for lifetime monitoring of Drosophila in 3D at spatial and temporal resolutions capable of resolving the motion of limbs and wings using holographic principles. The developed system is capable of monitoring and extracting various behavioral parameters, such as ethograms and spatial distributions, from a group of flies simultaneously. This technique can image complicated leg and wing motions of flies at a resolution, which allows capturing specific landing responses from the same data set. Overall, this system provides a unique opportunity for high throughput screenings of behavioral changes in 3D over a long term in Drosophila.

Programmable DNA scaffolds for spatially-ordered protein assembly.

PubMed

Chandrasekaran, Arun Richard

2016-02-28

Ever since the notion of using DNA as a material was realized, it has been employed in the construction of complex structures that facilitate the assembly of nanoparticles or macromolecules with nanometer-scale precision. Specifically, tiles fashioned from DNA strands and DNA origami sheets have been shown to be suitable as scaffolds for immobilizing proteins with excellent control over their spatial positioning. Supramolecular assembly of proteins into periodic arrays in one or more dimensions is one of the most challenging aspects in the design of scaffolds for biomolecular investigations and macromolecular crystallization. This review provides a brief overview of how various biomolecular interactions with high degree of specificity such as streptavidin-biotin, antigen-antibody, and aptamer-protein interactions have been used to fabricate linear and multidimensional assemblies of structurally intact and functional proteins. The use of DNA-binding proteins as adaptors, polyamide recognition on DNA scaffolds and oligonucleotide linkers for protein assembly are also discussed.

Perspectives of cross-sectional scanning tunneling microscopy and spectroscopy for complex oxide physics

NASA Astrophysics Data System (ADS)

Wang, Aaron; Chien, TeYu

2018-03-01

Complex oxide heterostructure interfaces have shown novel physical phenomena which do not exist in bulk materials. These heterostructures can be used in the potential applications in the next generation devices and served as the playgrounds for the fundamental physics research. The direct measurements of the interfaces with excellent spatial resolution and physical property information is rather difficult to achieve with the existing tools. Recently developed cross-sectional scanning tunneling microscopy and spectroscopy (XSTM/S) for complex oxide interfaces have proven to be capable of providing local electronic density of states (LDOS) information at the interface with spatial resolution down to nanometer scale. In this perspective, we will briefly introduce the basic idea and some recent achievements in using XSTM/S to study complex oxide interfaces. We will also discuss the future of this technique and the field of the interfacial physics.

Development of TlBr detectors for PET imaging.

PubMed

Ariño-Estrada, Gerard; Du, Junwei; Kim, Hadong; Cirignano, Leonard J; Shah, Kanai S; Cherry, Simon R; Mitchell, Gregory S

2018-05-04

Thallium bromide (TlBr) is a promising semiconductor detector material for positron emission tomography (PET) because it can offer very good energy resolution and 3-D segmentation capabilities, and it also provides detection efficiency surpassing that of commonly used scintillators. Energy, timing, and spatial resolution were measured for thin (<1 mm) TlBr detectors. The energy and timing resolution were measured simultaneously for the same planar 0.87 mm-thick TlBr device. An energy resolution of (6.41.3)% at 511 keV was achieved at -400 V bias voltage and at room temperature. A timing resolution of (27.84.1) ns FWHM was achieved for the same operating conditions when appropriate energy gating was applied. The intrinsic spatial resolution was measured to be 0.9 mm FWHM for a TlBr detector with metallic strip contacts of 0.5 mm pitch. As material properties improve, higher bias voltage should improve timing performance. A stack of thin detectors with finely segmented readout can create a modular detector with excellent energy and spatial resolution for PET applications. . © 2018 Institute of Physics and Engineering in Medicine.

Maintaining Multimedia Data in a Geospatial Database

DTIC Science & Technology

2012-09-01

at PostgreSQL and MySQL as spatial databases was offered. Given their results, as each database produced result sets from zero to 100,000, it was...excelled given multiple conditions. A different look at PostgreSQL and MySQL as spatial databases was offered. Given their results, as each database... MySQL ................................................................................................14  B.  BENCHMARKING DATA RETRIEVED FROM TABLE

Maintenance of genetic diversity through plant-herbivore interactions

PubMed Central

Gloss, Andrew D.; Dittrich, Anna C. Nelson; Goldman-Huertas, Benjamin; Whiteman, Noah K.

2013-01-01

Identifying the factors governing the maintenance of genetic variation is a central challenge in evolutionary biology. New genomic data, methods and conceptual advances provide increasing evidence that balancing selection, mediated by antagonistic species interactions, maintains functionally-important genetic variation within species and natural populations. Because diverse interactions between plants and herbivorous insects dominate terrestrial communities, they provide excellent systems to address this hypothesis. Population genomic studies of Arabidopsis thaliana and its relatives suggest spatial variation in herbivory maintains adaptive genetic variation controlling defense phenotypes, both within and among populations. Conversely, inter-species variation in plant defenses promotes adaptive genetic variation in herbivores. Emerging genomic model herbivores of Arabidopsis could illuminate how genetic variation in herbivores and plants interact simultaneously. PMID:23834766

Nd:AlN polycrystalline ceramics: A candidate media for tunable, high energy, near IR lasers

NASA Astrophysics Data System (ADS)

Wieg, A. T.; Grossnickle, M. J.; Kodera, Y.; Gabor, N. M.; Garay, J. E.

2016-09-01

We present processing and characterization of Nd-doped aluminum nitride (Nd:AlN) polycrystalline ceramics. We compare ceramics with significant segregation of Nd to those exhibiting minimal segregation. Spatially resolved photoluminescence maps reveal a strong correlation between homogeneous Nd doping and spatially homogeneous light emission. The spectroscopically resolved light emission lines show excellent agreement with the expected Nd electronic transitions. Notably, the lines are significantly broadened, producing near IR emission (˜1077 nm) with a remarkable ˜100 nm bandwidth at room temperature. We attribute the broadened lines to a combination of effects: multiple Nd-sites, anisotropy of AlN and phonon broadening. These broadened, overlapping lines in a media with excellent thermal conductivity have potential for Nd-based, tunable lasers with high average power.

Use and interpretation of climate envelope models: a practical guide

USGS Publications Warehouse

Watling, James I.; Brandt, Laura A.; Mazzotti, Frank J.; Romañach, Stephanie S.

2013-01-01

This guidebook is intended to provide a practical overview of climate envelope modeling for conservation professionals and natural resource managers. The material is intended for people with little background or experience in climate envelope modeling who want to better understand and interpret models developed by others and the results generated by such models, or want to do some modeling themselves. This is not an exhaustive review of climate envelope modeling, but rather a brief introduction to some key concepts in the discipline. Readers interested in a more in-depth treatment of much of the material presented here are referred to an excellent book, Mapping Species Distributions: Spatial Inference and Prediction by Janet Franklin. Also, a recent review (Araújo & Peterson 2012) provides an excellent, though more technical, discussion of many of the issues dealt with here. Here we treat selected topics from a practical perspective, using minimal jargon to explain and illustrate some of the many issues that one has to be aware of when using climate envelope models. When we do introduce specialized terminology in the guidebook, we bold the term when it is first used; a glossary of these terms is included at the back of the guidebook.

Disappearing the asylum: Modernizing psychiatry and generating manpower in India.

PubMed

Varma, Saiba

2016-12-01

In recent years, the Movement for Global Mental Health (MGMH) and the World Health Organization have worked closely with governments across the global South to redress major treatment gaps to improve access to mental health services. In India, recent reforms include transforming public psychiatric institutions from sites of treatment to research and training institutes, known as "Centres of Excellence," to combat acute manpower shortages and modernize psychiatry. Drawing on ethnographic fieldwork at a public psychiatric hospital in Srinagar, Kashmir, one of the institutions selected to be a future "Centre of Excellence," this article focuses on how these reforms have affected psychiatric institutions themselves. Efforts at modernizing and increasing access to mental health care-that is, emphasizing shortened stays, increasing outpatient treatment, and providing care in the "community"-depend on quarantining stigmatized, chronically ill, long-term patients who reside in custodial conditions with fewer resources and limited attention from providers. Psychiatrists have a radically different vision for redressing manpower shortages than the MGMH and Indian state, revealing contradictions in the reform process. This paper demonstrates how modernizing mental health care splits mental institutions spatially, ontologically, temporally, and epistemologically, so that the process of modernizing the institution is neither seamless nor complete.

Utah FORGE Groundwater Data

DOE Data Explorer

Joe Moore

2016-07-20

This submission includes two modelled drawdown scenarios with new supply well locations, a total dissolved solids (TDS) concentration grid (raster dataset representing the spatial distribution of TDS), and an excel spreadsheet containing well data.

The Development of GIS Educational Resources Sharing among Central Taiwan Universities

NASA Astrophysics Data System (ADS)

Chou, T.-Y.; Yeh, M.-L.; Lai, Y.-C.

2011-09-01

Using GIS in the classroom enhance students' computer skills and explore the range of knowledge. The paper highlights GIS integration on e-learning platform and introduces a variety of abundant educational resources. This research project will demonstrate tools for e-learning environment and delivers some case studies for learning interaction from Central Taiwan Universities. Feng Chia University (FCU) obtained a remarkable academic project subsidized by Ministry of Education and developed e-learning platform for excellence in teaching/learning programs among Central Taiwan's universities. The aim of the project is to integrate the educational resources of 13 universities in central Taiwan. FCU is serving as the hub of Center University. To overcome the problem of distance, e-platforms have been established to create experiences with collaboration enhanced learning. The e-platforms provide coordination of web service access among the educational community and deliver GIS educational resources. Most of GIS related courses cover the development of GIS, principles of cartography, spatial data analysis and overlaying, terrain analysis, buffer analysis, 3D GIS application, Remote Sensing, GPS technology, and WebGIS, MobileGIS, ArcGIS manipulation. In each GIS case study, students have been taught to know geographic meaning, collect spatial data and then use ArcGIS software to analyze spatial data. On one of e-Learning platforms provide lesson plans and presentation slides. Students can learn Arc GIS online. As they analyze spatial data, they can connect to GIS hub to get data they need including satellite images, aerial photos, and vector data. Moreover, e-learning platforms provide solutions and resources. Different levels of image scales have been integrated into the systems. Multi-scale spatial development and analyses in Central Taiwan integrate academic research resources among CTTLRC partners. Thus, establish decision-making support mechanism in teaching and learning. Accelerate communication, cooperation and sharing among academic units

Testing approximations for non-linear gravitational clustering

NASA Technical Reports Server (NTRS)

Coles, Peter; Melott, Adrian L.; Shandarin, Sergei F.

1993-01-01

The accuracy of various analytic approximations for following the evolution of cosmological density fluctuations into the nonlinear regime is investigated. The Zel'dovich approximation is found to be consistently the best approximation scheme. It is extremely accurate for power spectra characterized by n = -1 or less; when the approximation is 'enhanced' by truncating highly nonlinear Fourier modes the approximation is excellent even for n = +1. The performance of linear theory is less spectrum-dependent, but this approximation is less accurate than the Zel'dovich one for all cases because of the failure to treat dynamics. The lognormal approximation generally provides a very poor fit to the spatial pattern.

Double-tilt in situ TEM holder with ultra-high stability.

PubMed

Xu, Mingjie; Dai, Sheng; Blum, Thomas; Li, Linze; Pan, Xiaoqing

2018-05-06

A double tilting holder with high stability is essential for acquiring atomic-scale information by transmission electron microscopy (TEM), but the availability of such holders for in situ TEM studies under various external stimuli is limited. Here, we report a unique design of seal-bearing components that provides ultra-high stability and multifunctionality (including double tilting) in an in situ TEM holder. The seal-bearing subsystem provides superior vibration damping and electrical insulation while maintaining excellent vacuum sealing and small form factor. A wide variety of in situ TEM applications including electrical measurement, STM mapping, photovoltaic studies, and CL spectroscopy can be performed on this platform with high spatial resolution imaging and electrical sensitivity at the pA scale. Copyright © 2018 Elsevier B.V. All rights reserved.

On the Character and Mitigation of Atmospheric Noise in InSAR Time Series Analysis (Invited)

NASA Astrophysics Data System (ADS)

Barnhart, W. D.; Fielding, E. J.; Fishbein, E.

2013-12-01

Time series analysis of interferometric synthetic aperture radar (InSAR) data, with its broad spatial coverage and ability to image regions that are sometimes very difficult to access, is a powerful tool for characterizing continental surface deformation and its temporal variations. With the impending launch of dedicated SAR missions such as Sentinel-1, ALOS-2, and the planned NASA L-band SAR mission, large volume data sets will allow researchers to further probe ground displacement processes with increased fidelity. Unfortunately, the precision of measurements in individual interferograms is impacted by several sources of noise, notably spatially correlated signals caused by path delays through the stratified and turbulent atmosphere and ionosphere. Spatial and temporal variations in atmospheric water vapor often introduce several to tens of centimeters of apparent deformation in the radar line-of-sight, correlated over short spatial scales (<10 km). Signals resulting from atmospheric path delays are particularly problematic because, like the subsidence and uplift signals associated with tectonic deformation, they are often spatially correlated with topography. In this talk, we provide an overview of the effects of spatially correlated tropospheric noise in individual interferograms and InSAR time series analysis, and we highlight where common assumptions of the temporal and spatial characteristics of tropospheric noise fail. Next, we discuss two classes of methods for mitigating the effects of tropospheric water vapor noise in InSAR time series analysis and single interferograms: noise estimation and characterization with independent observations from multispectral sensors such as MODIS and MERIS; and noise estimation and removal with weather models, multispectral sensor observations, and GPS. Each of these techniques can provide independent assessments of the contribution of water vapor in interferograms, but each technique also suffers from several pitfalls that we outline. The multispectral near-infrared (NIR) sensors provide high spatial resolution (~1 km) estimates of total column tropospheric water vapor by measuring the absorption of reflected solar illumination and provide may excellent estimates of wet delay. The Online Services for Correcting Atmosphere in Radar (OSCAR) project currently provides water vapor products through web services (http://oscar.jpl.nasa.gov). Unfortunately, such sensors require daytime and cloudless observations. Global and regional numerical weather models can provide an additional estimate of both the dry and atmospheric delays with spatial resolution of (3-100 km) and time scales of 1-3 hours, though these models are of lower accuracy than imaging observations and are benefited by independent observations from independent observations of atmospheric water vapor. Despite these issues, the integration of these techniques for InSAR correction and uncertainty estimation may contribute substantially to the reduction and rigorous characterization of uncertainty in InSAR time series analysis - helping to expand the range of tectonic displacements imaged with InSAR, to robustly constrain geophysical models, and to generate a-priori assessments of satellite acquisitions goals.

Characterizing groundwater quality ranks for drinking purposes in Sylhet district, Bangladesh, using entropy method, spatial autocorrelation index, and geostatistics.

PubMed

Islam, Abu Reza Md Towfiqul; Ahmed, Nasir; Bodrud-Doza, Md; Chu, Ronghao

2017-12-01

Drinking water is susceptible to the poor quality of contaminated water affecting the health of humans. Thus, it is an essential study to investigate factors affecting groundwater quality and its suitability for drinking uses. In this paper, the entropy theory, multivariate statistics, spatial autocorrelation index, and geostatistics are applied to characterize groundwater quality and its spatial variability in the Sylhet district of Bangladesh. A total of 91samples have been collected from wells (e.g., shallow, intermediate, and deep tube wells at 15-300-m depth) from the study area. The results show that NO 3 - , then SO 4 2- , and As are the most contributed parameters influencing the groundwater quality according to the entropy theory. The principal component analysis (PCA) and correlation coefficient also confirm the results of the entropy theory. However, Na + has the highest spatial autocorrelation and the most entropy, thus affecting the groundwater quality. Based on the entropy-weighted water quality index (EWQI) and groundwater quality index (GWQI) classifications, it is observed that 60.45 and 53.86% of water samples are classified as having an excellent to good qualities, while the remaining samples vary from medium to extremely poor quality domains for drinking purposes. Furthermore, the EWQI classification provides the more reasonable results than GWQIs due to its simplicity, accuracy, and ignoring of artificial weight. A Gaussian semivariogram model has been chosen to the best fit model, and groundwater quality indices have a weak spatial dependence, suggesting that both geogenic and anthropogenic factors play a pivotal role in spatial heterogeneity of groundwater quality oscillations.

Alcohol beverage control, privatization and the geographic distribution of alcohol outlets

PubMed Central

2012-01-01

Background With Pennsylvania currently considering a move away from an Alcohol Beverage Control state to a privatized alcohol distribution system, this study uses a spatial analytical approach to examine potential impacts of privatization on the number and spatial distribution of alcohol outlets in the city of Philadelphia over a long time horizon. Methods A suite of geospatial data were acquired for Philadelphia, including 1,964 alcohol outlet locations, 569,928 land parcels, and school, church, hospital, park and playground locations. These data were used as inputs for exploratory spatial analysis to estimate the expected number of outlets that would eventually operate in Philadelphia. Constraints included proximity restrictions (based on current ordinances regulating outlet distribution) of at least 200 feet between alcohol outlets and at least 300 feet between outlets and schools, churches, hospitals, parks and playgrounds. Results Findings suggest that current state policies on alcohol outlet distributions in Philadelphia are loosely enforced, with many areas exhibiting extremely high spatial densities of outlets that violate existing proximity restrictions. The spatial model indicates that an additional 1,115 outlets could open in Philadelphia if privatization was to occur and current proximity ordinances were maintained. Conclusions The study reveals that spatial analytical approaches can function as an excellent tool for contingency-based “what-if” analysis, providing an objective snapshot of potential policy outcomes prior to implementation. In this case, the likely outcome is a tremendous increase in alcohol outlets in Philadelphia, with concomitant negative health, crime and quality of life outcomes that accompany such an increase. PMID:23170899

Controlled supercontinua via spatial beam shaping

NASA Astrophysics Data System (ADS)

Zhdanova, Alexandra A.; Shen, Yujie; Thompson, Jonathan V.; Scully, Marlan O.; Yakovlev, Vladislav V.; Sokolov, Alexei V.

2018-06-01

Recently, optimization techniques have had a significant impact in a variety of fields, leading to a higher signal-to-noise and more streamlined techniques. We consider the possibility for using programmable phase-only spatial optimization of the pump beam to influence the supercontinuum generation process. Preliminary results show that significant broadening and rough control of the supercontinuum spectrum in the visible region are possible without loss of input energy. This serves as a proof-of-concept demonstration that spatial effects can controllably influence the supercontinuum spectrum, leading to possibilities for utilizing supercontinuum power more efficiently and achieving excellent spectral control.

On-chip transduction of nucleic acid hybridization using spatial profiles of immobilized quantum dots and fluorescence resonance energy transfer.

PubMed

Tavares, Anthony J; Noor, M Omair; Vannoy, Charles H; Algar, W Russ; Krull, Ulrich J

2012-01-03

The glass surface of a glass-polydimethylsiloxane (PDMS) microfluidic channel was modified to develop a solid-phase assay for quantitative determination of nucleic acids. Electroosmotic flow (EOF) within channels was used to deliver and immobilize semiconductor quantum dots (QDs), and electrophoresis was used to decorate the QDs with oligonucleotide probe sequences. These processes took only minutes to complete. The QDs served as energy donors in fluorescence resonance energy transfer (FRET) for transduction of nucleic acid hybridization. Electrokinetic injection of fluorescent dye (Cy3) labeled oligonucleotide target into a microfluidic channel and subsequent hybridization (within minutes) provided the proximity for FRET, with emission from Cy3 being the analytical signal. The quantification of target concentration was achieved by measurement of the spatial length of coverage by target along a channel. Detection of femtomole quantities of target was possible with a dynamic range spanning an order of magnitude. The assay provided excellent resistance to nonspecific interactions of DNA. Further selectivity of the assay was achieved using 20% formamide, which allowed discrimination between a fully complementary target and a 3 base pair mismatch target at a contrast ratio of 4:1. © 2011 American Chemical Society

Three-dimensional nanoscale characterisation of materials by atom probe tomography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Devaraj, Arun; Perea, Daniel E.; Liu, Jia

The development of three-dimensional (3D), characterization techniques with high spatial and mass resolution is crucial for understanding and developing advanced materials for many engineering applications as well as for understanding natural materials. In recent decades, atom probe tomography (APT) which combines a point projection microscope and time-of-flight mass spectrometer has evolved to be an excellent characterization technique capable of providing 3D nanoscale characterization of materials with sub-nanometer scale spatial resolution, with equal sensitivity for all elements. This review discusses the current state as of beginning of the year 2016 of APT instrumentation, new developments in sample preparation methods, experimental proceduresmore » for different material classes, reconstruction of APT results, the current status of correlative microscopy, and application of APT for microstructural characterization in established scientific areas like structural materials as well as new applications in semiconducting nanowires, semiconductor devices, battery materials, catalyst materials, geological materials and biological materials. Finally, a brief perspective is given regarding the future of APT.« less

Design of the 2D electron cyclotron emission imaging instrument for the J-TEXT tokamak.

PubMed

Pan, X M; Yang, Z J; Ma, X D; Zhu, Y L; Luhmann, N C; Domier, C W; Ruan, B W; Zhuang, G

2016-11-01

A new 2D Electron Cyclotron Emission Imaging (ECEI) diagnostic is being developed for the J-TEXT tokamak. It will provide the 2D electron temperature information with high spatial, temporal, and temperature resolution. The new ECEI instrument is being designed to support fundamental physics investigations on J-TEXT including MHD, disruption prediction, and energy transport. The diagnostic contains two dual dipole antenna arrays corresponding to F band (90-140 GHz) and W band (75-110 GHz), respectively, and comprises a total of 256 channels. The system can observe the same magnetic surface at both the high field side and low field side simultaneously. An advanced optical system has been designed which permits the two arrays to focus on a wide continuous region or two radially separate regions with high imaging spatial resolution. It also incorporates excellent field curvature correction with field curvature adjustment lenses. An overview of the diagnostic and the technical progress including the new remote control technique are presented.

All-atom ensemble modeling to analyze small angle X-ray scattering of glycosylated proteins

PubMed Central

Guttman, Miklos; Weinkam, Patrick; Sali, Andrej; Lee, Kelly K.

2013-01-01

Summary The flexible and heterogeneous nature of carbohydrate chains often renders glycoproteins refractory to traditional structure determination methods. Small Angle X-ray scattering (SAXS) can be a useful tool for obtaining structural information of these systems. All-atom modeling of glycoproteins with flexible glycan chains was applied to interpret the solution SAXS data for a set of glycoproteins. For simpler systems (single glycan, with a well defined protein structure), all-atom modeling generates models in excellent agreement with the scattering pattern, and reveals the approximate spatial occupancy of the glycan chain in solution. For more complex systems (several glycan chains, or unknown protein substructure), the approach can still provide insightful models, though the orientations of glycans become poorly determined. Ab initio shape reconstructions appear to capture the global morphology of glycoproteins, but in most cases offer little information about glycan spatial occupancy. The all-atom modeling methodology is available as a webserver at http://modbase.compbio.ucsf.edu/allosmod-foxs. PMID:23473666

Design of the 2D electron cyclotron emission imaging instrument for the J-TEXT tokamak

DOE Office of Scientific and Technical Information (OSTI.GOV)

Pan, X. M.; Yang, Z. J., E-mail: yangzj@hust.edu.cn; Ma, X. D.

2016-11-15

A new 2D Electron Cyclotron Emission Imaging (ECEI) diagnostic is being developed for the J-TEXT tokamak. It will provide the 2D electron temperature information with high spatial, temporal, and temperature resolution. The new ECEI instrument is being designed to support fundamental physics investigations on J-TEXT including MHD, disruption prediction, and energy transport. The diagnostic contains two dual dipole antenna arrays corresponding to F band (90-140 GHz) and W band (75-110 GHz), respectively, and comprises a total of 256 channels. The system can observe the same magnetic surface at both the high field side and low field side simultaneously. An advancedmore » optical system has been designed which permits the two arrays to focus on a wide continuous region or two radially separate regions with high imaging spatial resolution. It also incorporates excellent field curvature correction with field curvature adjustment lenses. An overview of the diagnostic and the technical progress including the new remote control technique are presented.« less

Infrared observations of Jovian aurora from Juno's first orbits: Main oval and satellite footprints

NASA Astrophysics Data System (ADS)

Mura, A.; Adriani, A.; Altieri, F.; Connerney, J. E. P.; Bolton, S. J.; Moriconi, M. L.; Gérard, J.-C.; Kurth, W. S.; Dinelli, B. M.; Fabiano, F.; Tosi, F.; Atreya, S. K.; Bagenal, F.; Gladstone, G. R.; Hansen, C.; Levin, S. M.; Mauk, B. H.; McComas, D. J.; Sindoni, G.; Filacchione, G.; Migliorini, A.; Grassi, D.; Piccioni, G.; Noschese, R.; Cicchetti, A.; Turrini, D.; Stefani, S.; Amoroso, M.; Olivieri, A.

2017-06-01

The Jovian Infrared Auroral Mapper (JIRAM) is an imager/spectrometer on board NASA/Juno mission for the study of the Jovian aurorae. The first results of JIRAM's imager channel observations of the H3+ infrared emission, collected around the first Juno perijove, provide excellent spatial and temporal distribution of the Jovian aurorae, and show the morphology of the main ovals, the polar regions, and the footprints of Io, Europa and Ganymede. The extended Io "tail" persists for 3 h after the passage of the satellite flux tube. Multi-arc structures of varied spatial extent appear in both main auroral ovals. Inside the main ovals, intense, localized emissions are observed. In the southern aurora, an evident circular region of strong depletion of H3+ emissions is partially surrounded by an intense emission arc. The southern aurora is brighter than the north one in these observations. Similar, probably conjugate emission patterns are distinguishable in both polar regions.

Development of a Bolometer Detector System for the NIST High Accuracy Infrared Spectrophotometer

PubMed Central

Zong, Y.; Datla, R. U.

1998-01-01

A bolometer detector system was developed for the high accuracy infrared spectrophotometer at the National Institute of Standards and Technology to provide maximum sensitivity, spatial uniformity, and linearity of response covering the entire infrared spectral range. The spatial response variation was measured to be within 0.1 %. The linearity of the detector output was measured over three decades of input power. After applying a simple correction procedure, the detector output was found to deviate less than 0.2 % from linear behavior over this range. The noise equivalent power (NEP) of the bolometer system was 6 × 10−12 W/Hz at the frequency of 80 Hz. The detector output 3 dB roll-off frequency was 200 Hz. The detector output was stable to within ± 0.05 % over a 15 min period. These results demonstrate that the bolometer detector system will serve as an excellent detector for the high accuracy infrared spectrophotometer. PMID:28009364

Experiment K305: Quantitative analysis of selected bone parameters. Supplement 3A: Trabecular spacing and orientation in the long bones

NASA Technical Reports Server (NTRS)

Judy, M. M.

1981-01-01

Values of mean trabecular spacing computed from optical diffraction patterns of 1:1 X-ray micrographs of tibial metaphysis and those obtained by standard image digitization techniques show excellent agreement. Upper limits on values of mean trabecular orientation deduced from diffraction patterns and the images are also in excellent agreement. Values of the ratio of mean trabecular spatial density in a region of 300 micrometers distal to the downwardly directed convexity in the cartilage growth plate to the value adjacent to the plate determined for flight animals sacrificed at recovery were significantly smaller than values for vivarium control animals. No significant differences were found in proximal regions. No significant differences in mean trabecular orientation were detected. Decreased values of trabecular spatial density and of both obsteoblastic activity and trabecular cross-sectional area noted in collateral researches suggest decreased modeling activity under weightlessness.

A nonparametric spatial scan statistic for continuous data.

PubMed

Jung, Inkyung; Cho, Ho Jin

2015-10-20

Spatial scan statistics are widely used for spatial cluster detection, and several parametric models exist. For continuous data, a normal-based scan statistic can be used. However, the performance of the model has not been fully evaluated for non-normal data. We propose a nonparametric spatial scan statistic based on the Wilcoxon rank-sum test statistic and compared the performance of the method with parametric models via a simulation study under various scenarios. The nonparametric method outperforms the normal-based scan statistic in terms of power and accuracy in almost all cases under consideration in the simulation study. The proposed nonparametric spatial scan statistic is therefore an excellent alternative to the normal model for continuous data and is especially useful for data following skewed or heavy-tailed distributions.

Abstract Spatial Reasoning as an Autistic Strength

PubMed Central

Stevenson, Jennifer L.; Gernsbacher, Morton Ann

2013-01-01

Autistic individuals typically excel on spatial tests that measure abstract reasoning, such as the Block Design subtest on intelligence test batteries and the Raven’s Progressive Matrices nonverbal test of intelligence. Such well-replicated findings suggest that abstract spatial processing is a relative and perhaps absolute strength of autistic individuals. However, previous studies have not systematically varied reasoning level – concrete vs. abstract – and test domain – spatial vs. numerical vs. verbal, which the current study did. Autistic participants (N = 72) and non-autistic participants (N = 72) completed a battery of 12 tests that varied by reasoning level (concrete vs. abstract) and domain (spatial vs. numerical vs. verbal). Autistic participants outperformed non-autistic participants on abstract spatial tests. Non-autistic participants did not outperform autistic participants on any of the three domains (spatial, numerical, and verbal) or at either of the two reasoning levels (concrete and abstract), suggesting similarity in abilities between autistic and non-autistic individuals, with abstract spatial reasoning as an autistic strength. PMID:23533615

The stochastic runoff-runon process: Extending its analysis to a finite hillslope

NASA Astrophysics Data System (ADS)

Jones, O. D.; Lane, P. N. J.; Sheridan, G. J.

2016-10-01

The stochastic runoff-runon process models the volume of infiltration excess runoff from a hillslope via the overland flow path. Spatial variability is represented in the model by the spatial distribution of rainfall and infiltration, and their ;correlation scale;, that is, the scale at which the spatial correlation of rainfall and infiltration become negligible. Notably, the process can produce runoff even when the mean rainfall rate is less than the mean infiltration rate, and it displays a gradual increase in net runoff as the rainfall rate increases. In this paper we present a number of contributions to the analysis of the stochastic runoff-runon process. Firstly we illustrate the suitability of the process by fitting it to experimental data. Next we extend previous asymptotic analyses to include the cases where the mean rainfall rate equals or exceeds the mean infiltration rate, and then use Monte Carlo simulation to explore the range of parameters for which the asymptotic limit gives a good approximation on finite hillslopes. Finally we use this to obtain an equation for the mean net runoff, consistent with our asymptotic results but providing an excellent approximation for finite hillslopes. Our function uses a single parameter to capture spatial variability, and varying this parameter gives us a family of curves which interpolate between known upper and lower bounds for the mean net runoff.

Phylogenetic congruence of lichenised fungi and algae is affected by spatial scale and taxonomic diversity.

PubMed

Buckley, Hannah L; Rafat, Arash; Ridden, Johnathon D; Cruickshank, Robert H; Ridgway, Hayley J; Paterson, Adrian M

2014-01-01

The role of species' interactions in structuring biological communities remains unclear. Mutualistic symbioses, involving close positive interactions between two distinct organismal lineages, provide an excellent means to explore the roles of both evolutionary and ecological processes in determining how positive interactions affect community structure. In this study, we investigate patterns of co-diversification between fungi and algae for a range of New Zealand lichens at the community, genus, and species levels and explore explanations for possible patterns related to spatial scale and pattern, taxonomic diversity of the lichens considered, and the level sampling replication. We assembled six independent datasets to compare patterns in phylogenetic congruence with varied spatial extent of sampling, taxonomic diversity and level of specimen replication. For each dataset, we used the DNA sequences from the ITS regions of both the fungal and algal genomes from lichen specimens to produce genetic distance matrices. Phylogenetic congruence between fungi and algae was quantified using distance-based redundancy analysis and we used geographic distance matrices in Moran's eigenvector mapping and variance partitioning to evaluate the effects of spatial variation on the quantification of phylogenetic congruence. Phylogenetic congruence was highly significant for all datasets and a large proportion of variance in both algal and fungal genetic distances was explained by partner genetic variation. Spatial variables, primarily at large and intermediate scales, were also important for explaining genetic diversity patterns in all datasets. Interestingly, spatial structuring was stronger for fungal than algal genetic variation. As the spatial extent of the samples increased, so too did the proportion of explained variation that was shared between the spatial variables and the partners' genetic variation. Different lichen taxa showed some variation in their phylogenetic congruence and spatial genetic patterns and where greater sample replication was used, the amount of variation explained by partner genetic variation increased. Our results suggest that the phylogenetic congruence pattern, at least at small spatial scales, is likely due to reciprocal co-adaptation or co-dispersal. However, the detection of these patterns varies among different lichen taxa, across spatial scales and with different levels of sample replication. This work provides insight into the complexities faced in determining how evolutionary and ecological processes may interact to generate diversity in symbiotic association patterns at the population and community levels. Further, it highlights the critical importance of considering sample replication, taxonomic diversity and spatial scale in designing studies of co-diversification.

NQR: From imaging to explosives and drugs detection

NASA Astrophysics Data System (ADS)

Osán, Tristán M.; Cerioni, Lucas M. C.; Forguez, José; Ollé, Juan M.; Pusiol, Daniel J.

2007-02-01

The main aim of this work is to present an overview of the nuclear quadrupole resonance (NQR) spectroscopy capabilities for solid state imaging and detection of illegal substances, such as explosives and drugs. We briefly discuss the evolution of different NQR imaging techniques, in particular those involving spatial encoding which permit conservation of spectroscopic information. It has been shown that plastic explosives and other forbidden substances cannot be easily detected by means of conventional inspection techniques, such as those based on conventional X-ray technology. For this kind of applications, the experimental results show that the information inferred from NQR spectroscopy provides excellent means to perform volumetric and surface detection of dangerous explosive and drug compounds.

Ground- and Space-based Observations of Horizontally-extensive Lightning Flashes

NASA Astrophysics Data System (ADS)

Zhang, D.; Cummins, K. L.; Bitzer, P. M.

2017-12-01

Horizontally-extensive lightning flashes occur frequently in association with mature and late phases of multicellular thunderstorms, both in trailing stratiform regions and horizontally-extensive anvils. The spatial relationship between these flashes and the parent cloud volume is of importance for space launch operational decision making, and is of broader scientific interest. Before this question can be accurately addressed, there is a need to understand the degree to which current lightning observation systems can depict the spatial extent of these long flashes. In this ongoing work, we will intercompare the depiction of horizontally-extensive flashes using several ground-based lightning locating systems (LLSs) located at Kennedy Space Center (KSC) with space-based observations observed by the recently-launched Geostationary Lightning Mapper (GLM) onboard the GOES-16 satellite. Ground-based datasets include the KSC Lightning Mapping Array (KSCLMA), the operational narrowband digital interferometer network MERLIN, and the combined cloud-to-ground and cloud lightning dataset produced by the U.S. National Lightning Detection Network (NLDN). The KSCLMA system is a network of VHF time-of-arrival sensors that preferentially report breakdown processes, and MERLIN is a network of VHF interferometers that point to the discharges in the horizontal plane. Observations to date indicate that MERLIN and the KSCSLMA provide similar overall descriptions of the spatial and temporal extent of these flashes, while the NLDN does not provide adequate spatial mapping of these flashes. The KSC LMA system has much better location accuracy, and provides excellent 3-dimensional representation within 100 km of KSC. It also has sufficient sensitivity to provide 2-dimensional flash mapping within 250 km of KSC. The MERLIN system provides a more-detailed representation of fast leader propagation (in 2 dimensions) with 100 km of KSC. Earlier work during the CHUVA campaign in Brazil with similar systems and the (orbital) Lightning Imaging System (LIS) has shown that the interferometric data correlated much better in space and time with the LIS optical observations. We are currently investigating this relationship at KSC, where both the LMA and interferometer perform much better than the systems used during CHUVA.

Spatial imaging of carbon reactivity centers in Pd/C catalytic systems† †Electronic supplementary information (ESI) available: Detailed experimental procedures and FE-SEM images. See DOI: 10.1039/c5sc00802f

PubMed Central

Pentsak, E. O.; Kashin, A. S.; Polynski, M. V.; Kvashnina, K. O.; Glatzel, P.

2015-01-01

Gaining insight into Pd/C catalytic systems aimed at locating reactive centers on carbon surfaces, revealing their properties and estimating the number of reactive centers presents a challenging problem. In the present study state-of-the-art experimental techniques involving ultra high resolution SEM/STEM microscopy (1 Å resolution), high brilliance X-ray absorption spectroscopy and theoretical calculations on truly nanoscale systems were utilized to reveal the role of carbon centers in the formation and nature of Pd/C catalytic materials. Generation of Pd clusters in solution from the easily available Pd2dba3 precursor and the unique reactivity of the Pd clusters opened an excellent opportunity to develop an efficient procedure for the imaging of a carbon surface. Defect sites and reactivity centers of a carbon surface were mapped in three-dimensional space with high resolution and excellent contrast using a user-friendly nanoscale imaging procedure. The proposed imaging approach takes advantage of the specific interactions of reactive carbon centers with Pd clusters, which allows spatial information about chemical reactivity across the Pd/C system to be obtained using a microscopy technique. Mapping the reactivity centers with Pd markers provided unique information about the reactivity of the graphene layers and showed that >2000 reactive centers can be located per 1 μm2 of the surface area of the carbon material. A computational study at a PBE-D3-GPW level differentiated the relative affinity of the Pd2 species to the reactive centers of graphene. These findings emphasized the spatial complexity of the carbon material at the nanoscale and indicated the importance of the surface defect nature, which exhibited substantial gradients and variations across the surface area. The findings show the crucial role of the structure of the carbon support, which governs the formation of Pd/C systems and their catalytic activity. PMID:29511504

Peripheral Vasculature: High-Temporal- and High-Spatial-Resolution Three-dimensional Contrast-enhanced MR Angiography1

PubMed Central

Haider, Clifton R.; Glockner, James F.; Stanson, Anthony W.; Riederer, Stephen J.

2009-01-01

Purpose: To prospectively evaluate the feasibility of performing high-spatial-resolution (1-mm isotropic) time-resolved three-dimensional (3D) contrast material–enhanced magnetic resonance (MR) angiography of the peripheral vasculature with Cartesian acquisition with projection-reconstruction–like sampling (CAPR) and eightfold accelerated two-dimensional (2D) sensitivity encoding (SENSE). Materials and Methods: All studies were approved by the institutional review board and were HIPAA compliant; written informed consent was obtained from all participants. There were 13 volunteers (mean age, 41.9; range, 27–53 years). The CAPR sequence was adapted to provide 1-mm isotropic spatial resolution and a 5-second frame time. Use of different receiver coil element sizes for those placed on the anterior-to-posterior versus left-to-right sides of the field of view reduced signal-to-noise ratio loss due to acceleration. Results from eight volunteers were rated independently by two radiologists according to prominence of artifact, arterial to venous separation, vessel sharpness, continuity of arterial signal intensity in major arteries (anterior and posterior tibial, peroneal), demarcation of origin of major arteries, and overall diagnostic image quality. MR angiographic results in two patients with peripheral vascular disease were compared with their results at computed tomographic angiography. Results: The sequence exhibited no image artifact adversely affecting diagnostic image quality. Temporal resolution was evaluated to be sufficient in all cases, even with known rapid arterial to venous transit. The vessels were graded to have excellent sharpness, continuity, and demarcation of the origins of the major arteries. Distal muscular branches and the communicating and perforating arteries were routinely seen. Excellent diagnostic quality rating was given for 15 (94%) of 16 evaluations. Conclusion: The feasibility of performing high-diagnostic-quality time-resolved 3D contrast-enhanced MR angiography of the peripheral vasculature by using CAPR and eightfold accelerated 2D SENSE has been demonstrated. © RSNA, 2009 Supplemental material: http://radiology.rsna.org/lookup/suppl/doi:10.1148/radiol.2533081744/-/DC1 PMID:19789238

Research on Grid Size Suitability of Gridded Population Distribution in Urban Area: A Case Study in Urban Area of Xuanzhou District, China.

PubMed

Dong, Nan; Yang, Xiaohuan; Cai, Hongyan; Xu, Fengjiao

2017-01-01

The research on the grid size suitability is important to provide improvement in accuracies of gridded population distribution. It contributes to reveal the actual spatial distribution of population. However, currently little research has been done in this area. Many well-modeled gridded population dataset are basically built at a single grid scale. If the grid cell size is not appropriate, it will result in spatial information loss or data redundancy. Therefore, in order to capture the desired spatial variation of population within the area of interest, it is necessary to conduct research on grid size suitability. This study summarized three expressed levels to analyze grid size suitability, which include location expressed level, numeric information expressed level, and spatial relationship expressed level. This study elaborated the reasons for choosing the five indexes to explore expression suitability. These five indexes are consistency measure, shape index rate, standard deviation of population density, patches diversity index, and the average local variance. The suitable grid size was determined by constructing grid size-indicator value curves and suitable grid size scheme. Results revealed that the three expressed levels on 10m grid scale are satisfying. And the population distribution raster data with 10m grid size provide excellent accuracy without loss. The 10m grid size is recommended as the appropriate scale for generating a high-quality gridded population distribution in our study area. Based on this preliminary study, it indicates the five indexes are coordinated with each other and reasonable and effective to assess grid size suitability. We also suggest choosing these five indexes in three perspectives of expressed level to carry out the research on grid size suitability of gridded population distribution.

Research on Grid Size Suitability of Gridded Population Distribution in Urban Area: A Case Study in Urban Area of Xuanzhou District, China

PubMed Central

Dong, Nan; Yang, Xiaohuan; Cai, Hongyan; Xu, Fengjiao

2017-01-01

The research on the grid size suitability is important to provide improvement in accuracies of gridded population distribution. It contributes to reveal the actual spatial distribution of population. However, currently little research has been done in this area. Many well-modeled gridded population dataset are basically built at a single grid scale. If the grid cell size is not appropriate, it will result in spatial information loss or data redundancy. Therefore, in order to capture the desired spatial variation of population within the area of interest, it is necessary to conduct research on grid size suitability. This study summarized three expressed levels to analyze grid size suitability, which include location expressed level, numeric information expressed level, and spatial relationship expressed level. This study elaborated the reasons for choosing the five indexes to explore expression suitability. These five indexes are consistency measure, shape index rate, standard deviation of population density, patches diversity index, and the average local variance. The suitable grid size was determined by constructing grid size-indicator value curves and suitable grid size scheme. Results revealed that the three expressed levels on 10m grid scale are satisfying. And the population distribution raster data with 10m grid size provide excellent accuracy without loss. The 10m grid size is recommended as the appropriate scale for generating a high-quality gridded population distribution in our study area. Based on this preliminary study, it indicates the five indexes are coordinated with each other and reasonable and effective to assess grid size suitability. We also suggest choosing these five indexes in three perspectives of expressed level to carry out the research on grid size suitability of gridded population distribution. PMID:28122050

MR imaging of iliofemoral peripheral vascular calcifications using proton density-weighted, in-phase three-dimensional stack-of-stars gradient echo.

PubMed

Ferreira Botelho, Marcos P; Koktzoglou, Ioannis; Collins, Jeremy D; Giri, Shivraman; Carr, James C; Gupta, NavYash; Edelman, Robert R

2017-06-01

The presence of vascular calcifications helps to determine percutaneous access for interventional vascular procedures and has prognostic value for future cardiovascular events. Unlike CT, standard MRI techniques are insensitive to vascular calcifications. In this prospective study, we tested a proton density-weighted, in-phase (PDIP) three-dimensional (3D) stack-of-stars gradient-echo pulse sequence with approximately 1 mm 3 isotropic spatial resolution at 1.5 Tesla (T) and 3T to detect iliofemoral peripheral vascular calcifications and correlated MR-determined lesion volumes with CT angiography (CTA). The study was approved by the Institutional Review Board. The prototype PDIP stack-of-stars pulse sequence was applied in 12 patients with iliofemoral peripheral vascular calcifications who had undergone CTA. Vascular calcifications were well visualized in all subjects, excluding segments near prostheses or stents. The location, size, and shape of the calcifications were similar to CTA. Quantitative analysis showed excellent correlation (r 2  = 0.84; P < 0.0001) between MR- and CT-based measures of calcification volume. In one subject in whom three pulse sequences were compared, PDIP stack-of-stars outperformed cartesian 3D gradient-echo and point-wise encoding time reduction with radial acquisition (PETRA). In this pilot study, a PDIP 3D stack-of-stars gradient-echo pulse sequence with high spatial resolution provided excellent image quality and accurately depicted the location and volume of iliofemoral vascular calcifications. Magn Reson Med 77:2146-2152, 2017. © 2016 International Society for Magnetic Resonance in Medicine. © 2016 International Society for Magnetic Resonance in Medicine.

Assessing temporally and spatially resolved PM 2.5 exposures for epidemiological studies using satellite aerosol optical depth measurements

NASA Astrophysics Data System (ADS)

Kloog, Itai; Koutrakis, Petros; Coull, Brent A.; Lee, Hyung Joo; Schwartz, Joel

2011-11-01

Land use regression (LUR) models provide good estimates of spatially resolved long-term exposures, but are poor at capturing short term exposures. Satellite-derived Aerosol Optical Depth (AOD) measurements have the potential to provide spatio-temporally resolved predictions of both long and short term exposures, but previous studies have generally showed relatively low predictive power. Our objective was to extend our previous work on day-specific calibrations of AOD data using ground PM 2.5 measurements by incorporating commonly used LUR variables and meteorological variables, thus benefiting from both the spatial resolution from the LUR models and the spatio-temporal resolution from the satellite models. Later we use spatial smoothing to predict PM 2.5 concentrations for day/locations with missing AOD measures. We used mixed models with random slopes for day to calibrate AOD data for 2000-2008 across New-England with monitored PM 2.5 measurements. We then used a generalized additive mixed model with spatial smoothing to estimate PM 2.5 in location-day pairs with missing AOD, using regional measured PM 2.5, AOD values in neighboring cells, and land use. Finally, local (100 m) land use terms were used to model the difference between grid cell prediction and monitored value to capture very local traffic particles. Out-of-sample ten-fold cross-validation was used to quantify the accuracy of our predictions. For days with available AOD data we found high out-of-sample R2 (mean out-of-sample R2 = 0.830, year to year variation 0.725-0.904). For days without AOD values, our model performance was also excellent (mean out-of-sample R2 = 0.810, year to year variation 0.692-0.887). Importantly, these R2 are for daily, rather than monthly or yearly, values. Our model allows one to assess short term and long-term human exposures in order to investigate both the acute and chronic effects of ambient particles, respectively.

Is bigger always better? A critical appraisal of the use of volumetric analysis in the study of the hippocampus.

PubMed

Roth, Timothy C; Brodin, Anders; Smulders, Tom V; LaDage, Lara D; Pravosudov, Vladimir V

2010-03-27

A well-developed spatial memory is important for many animals, but appears especially important for scatter-hoarding species. Consequently, the scatter-hoarding system provides an excellent paradigm in which to study the integrative aspects of memory use within an ecological and evolutionary framework. One of the main tenets of this paradigm is that selection for enhanced spatial memory for cache locations should specialize the brain areas involved in memory. One such brain area is the hippocampus (Hp). Many studies have examined this adaptive specialization hypothesis, typically relating spatial memory to Hp volume. However, it is unclear how the volume of the Hp is related to its function for spatial memory. Thus, the goal of this article is to evaluate volume as a main measurement of the degree of morphological and physiological adaptation of the Hp as it relates to memory. We will briefly review the evidence for the specialization of memory in food-hoarding animals and discuss the philosophy behind volume as the main currency. We will then examine the problems associated with this approach, attempting to understand the advantages and limitations of using volume and discuss alternatives that might yield more specific hypotheses. Overall, there is strong evidence that the Hp is involved in the specialization of spatial memory in scatter-hoarding animals. However, volume may be only a coarse proxy for more relevant and subtle changes in the structure of the brain underlying changes in behaviour. To better understand the nature of this brain/memory relationship, we suggest focusing on more specific and relevant features of the Hp, such as the number or size of neurons, variation in connectivity depending on dendritic and axonal arborization and the number of synapses. These should generate more specific hypotheses derived from a solid theoretical background and should provide a better understanding of both neural mechanisms of memory and their evolution.

Sub-millimetre DOI detector based on monolithic LYSO and digital SiPM for a dedicated small-animal PET system.

PubMed

Marcinkowski, Radosław; Mollet, Pieter; Van Holen, Roel; Vandenberghe, Stefaan

2016-03-07

The mouse model is widely used in a vast range of biomedical and preclinical studies. Thanks to the ability to detect and quantify biological processes at the molecular level in vivo, PET has become a well-established tool in these investigations. However, the need to visualize and quantify radiopharmaceuticals in anatomic structures of millimetre or less requires good spatial resolution and sensitivity from small-animal PET imaging systems.In previous work we have presented a proof-of-concept of a dedicated high-resolution small-animal PET scanner based on thin monolithic scintillator crystals and Digital Photon Counter photosensor. The combination of thin monolithic crystals and MLE positioning algorithm resulted in an excellent spatial resolution of 0.7 mm uniform in the entire field of view (FOV). However, the limitation of the scanner was its low sensitivity due to small thickness of the lutetium-yttrium oxyorthosilicate (LYSO) crystals (2 mm).Here we present an improved detector design for a small-animal PET system that simultaneously achieves higher sensitivity and sustains a sub-millimetre spatial resolution. The proposed detector consists of a 5 mm thick monolithic LYSO crystal optically coupled to a Digital Photon Counter. Mean nearest neighbour (MNN) positioning combined with depth of interaction (DOI) decoding was employed to achieve sub-millimetre spatial resolution. To evaluate detector performance the intrinsic spatial resolution, energy resolution and coincidence resolving time (CRT) were measured. The average intrinsic spatial resolution of the detector was 0.60 mm full-width-at-half-maximum (FWHM). A DOI resolution of 1.66 mm was achieved. The energy resolution was 23% FWHM at 511 keV and CRT of 529 ps were measured. The improved detector design overcomes the sensitivity limitation of the previous design by increasing the nominal sensitivity of the detector block and retains an excellent intrinsic spatial resolution.

Imaging technologies for preclinical models of bone and joint disorders

PubMed Central

2011-01-01

Preclinical models for musculoskeletal disorders are critical for understanding the pathogenesis of bone and joint disorders in humans and the development of effective therapies. The assessment of these models primarily relies on morphological analysis which remains time consuming and costly, requiring large numbers of animals to be tested through different stages of the disease. The implementation of preclinical imaging represents a keystone in the refinement of animal models allowing longitudinal studies and enabling a powerful, non-invasive and clinically translatable way for monitoring disease progression in real time. Our aim is to highlight examples that demonstrate the advantages and limitations of different imaging modalities including magnetic resonance imaging (MRI), computed tomography (CT), positron emission tomography (PET), single-photon emission computed tomography (SPECT) and optical imaging. All of which are in current use in preclinical skeletal research. MRI can provide high resolution of soft tissue structures, but imaging requires comparatively long acquisition times; hence, animals require long-term anaesthesia. CT is extensively used in bone and joint disorders providing excellent spatial resolution and good contrast for bone imaging. Despite its excellent structural assessment of mineralized structures, CT does not provide in vivo functional information of ongoing biological processes. Nuclear medicine is a very promising tool for investigating functional and molecular processes in vivo with new tracers becoming available as biomarkers. The combined use of imaging modalities also holds significant potential for the assessment of disease pathogenesis in animal models of musculoskeletal disorders, minimising the use of conventional invasive methods and animal redundancy. PMID:22214535

Functional Magnetic Resonance Imaging

ERIC Educational Resources Information Center

Voos, Avery; Pelphrey, Kevin

2013-01-01

Functional magnetic resonance imaging (fMRI), with its excellent spatial resolution and ability to visualize networks of neuroanatomical structures involved in complex information processing, has become the dominant technique for the study of brain function and its development. The accessibility of in-vivo pediatric brain-imaging techniques…

Genome-wide signatures of flowering adaptation to climate temperature: Regional analyses in a highly diverse native range of Arabidopsis thaliana.

PubMed

Tabas-Madrid, Daniel; Méndez-Vigo, Belén; Arteaga, Noelia; Marcer, Arnald; Pascual-Montano, Alberto; Weigel, Detlef; Xavier Picó, F; Alonso-Blanco, Carlos

2018-03-08

Current global change is fueling an interest to understand the genetic and molecular mechanisms of plant adaptation to climate. In particular, altered flowering time is a common strategy for escape from unfavourable climate temperature. In order to determine the genomic bases underlying flowering time adaptation to this climatic factor, we have systematically analysed a collection of 174 highly diverse Arabidopsis thaliana accessions from the Iberian Peninsula. Analyses of 1.88 million single nucleotide polymorphisms provide evidence for a spatially heterogeneous contribution of demographic and adaptive processes to geographic patterns of genetic variation. Mountains appear to be allele dispersal barriers, whereas the relationship between flowering time and temperature depended on the precise temperature range. Environmental genome-wide associations supported an overall genome adaptation to temperature, with 9.4% of the genes showing significant associations. Furthermore, phenotypic genome-wide associations provided a catalogue of candidate genes underlying flowering time variation. Finally, comparison of environmental and phenotypic genome-wide associations identified known (Twin Sister of FT, FRIGIDA-like 1, and Casein Kinase II Beta chain 1) and new (Epithiospecifer Modifier 1 and Voltage-Dependent Anion Channel 5) genes as candidates for adaptation to climate temperature by altered flowering time. Thus, this regional collection provides an excellent resource to address the spatial complexity of climate adaptation in annual plants. © 2018 John Wiley & Sons Ltd.

Quantitative Susceptibility Mapping of Human Brain Reflects Spatial Variation in Tissue Composition

PubMed Central

Li, Wei; Wu, Bing; Liu, Chunlei

2011-01-01

Image phase from gradient echo MRI provides a unique contrast that reflects brain tissue composition variations, such as iron and myelin distribution. Phase imaging is emerging as a powerful tool for the investigation of functional brain anatomy and disease diagnosis. However, the quantitative value of phase is compromised by its nonlocal and orientation dependent properties. There is an increasing need for reliable quantification of magnetic susceptibility, the intrinsic property of tissue. In this study, we developed a novel and accurate susceptibility mapping method that is also phase-wrap insensitive. The proposed susceptibility mapping method utilized two complementary equations: (1) the Fourier relationship of phase and magnetic susceptibility; and (2) the first-order partial derivative of the first equation in the spatial frequency domain. In numerical simulation, this method reconstructed the susceptibility map almost free of streaking artifact. Further, the iterative implementation of this method allowed for high quality reconstruction of susceptibility maps of human brain in vivo. The reconstructed susceptibility map provided excellent contrast of iron-rich deep nuclei and white matter bundles from surrounding tissues. Further, it also revealed anisotropic magnetic susceptibility in brain white matter. Hence, the proposed susceptibility mapping method may provide a powerful tool for the study of brain physiology and pathophysiology. Further elucidation of anisotropic magnetic susceptibility in vivo may allow us to gain more insight into the white matter microarchitectures. PMID:21224002

ARS-Media for excel instruction manual

USDA-ARS?s Scientific Manuscript database

ARS-Media for Excel Instruction Manual is the instruction manual that explains how to use the Excel spreadsheet ARS-Media for Excel application. ARS-Media for Excel Instruction Manual is provided as a pdf file....

9+ Years of CALIPSO PSC Observations: An Evolving Climatology

NASA Technical Reports Server (NTRS)

Pitts, Michael C.; Poole, Lamont R.

2015-01-01

Polar stratospheric clouds (PSCs) play a crucial role in the springtime chemical depletion of ozone at high latitudes. PSC particles (primarily supercooled ternary solution, or STS droplets) provide sites for heterogeneous chemical reactions that transform stable chlorine and bromine reservoir species into highly reactive ozone-destructive forms. Furthermore, large nitric acid trihydrate (NAT) PSC particles can irreversibly redistribute odd nitrogen through gravitational sedimentation (a process commonly known as denitrification), which prolongs the ozone depletion process by slowing the reformation of the stable chlorine reservoirs. Spaceborne observations from the CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization) lidar on the CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations) satellite are providing a rich new dataset for studying PSCs. CALIPSO is an excellent platform for studying polar processes with CALIOP acquiring, on average, over 300,000 backscatter profiles daily at latitudes between 55o and 82o in both hemispheres. PSCs are detected in the CALIOP backscatter profiles using a successive horizontal averaging scheme that enables detection of strongly scattering PSCs (e.g., ice) at the finest possible spatial resolution (5 km), while enhancing the detection of very tenuous PSCs (e.g., low number density NAT) at larger spatial scales (up to 135 km). CALIOP PSCs are separated into composition classes (STS; liquid/NAT mixtures; and ice) based on the ensemble 532-nm scattering ratio (the ratio of total-to-molecular backscatter) and 532-nm particulate depolarization ratio (which is sensitive to the presence of non-spherical, i.e. NAT and ice particles). In this paper, we will provide an overview of the CALIOP PSC detection and composition classification algorithm and then examine the vertical and spatial distribution of PSCs in the Arctic and Antarctic on vortex-wide scales for entire PSC seasons over the more than nine-year data record from 2006- 2015.

CALIPSO Polar Stratospheric Cloud Observations from 2006-2015

NASA Technical Reports Server (NTRS)

Pitts, Michael C.; Poole, Lamont R.

2015-01-01

Polar stratospheric clouds (PSCs) play a crucial role in the springtime chemical depletion of ozone at high latitudes. PSC particles (primarily supercooled ternary solution, or STS droplets) provide sites for heterogeneous chemical reactions that transform stable chlorine and bromine reservoir species into highly reactive ozone-destructive forms. Furthermore, large nitric acid trihydrate (NAT) PSC particles can irreversibly redistribute odd nitrogen through gravitational sedimentation (a process commonly known as denitrification), which prolongs the ozone depletion process by slowing the reformation of the stable chlorine reservoirs. Spaceborne observations from the CALIOP (Cloud-Aerosol Lidar with Orthogonal Polarization) lidar on the CALIPSO (Cloud-Aerosol Lidar and Infrared Pathfinder Satellite Observations) satellite are providing a rich new dataset for studying PSCs. CALIPSO is an excellent platform for studying polar processes with CALIOP acquiring, on average, over 300,000 backscatter profiles daily at latitudes between 55o and 82o in both hemispheres. PSCs are detected in the CALIOP backscatter profiles using a successive horizontal averaging scheme that enables detection of strongly scattering PSCs (e.g., ice) at the finest possible spatial resolution (5 km), while enhancing the detection of very tenuous PSCs (e.g., low number density NAT) at larger spatial scales (up to 135 km). CALIOP PSCs are separated into composition classes (STS; liquid/NAT mixtures; and ice) based on the ensemble 532-nm scattering ratio (the ratio of total-to-molecular backscatter) and 532-nm particulate depolarization ratio (which is sensitive to the presence of non-spherical, i.e. NAT and ice particles). In this paper, we will provide an overview of the CALIOP PSC detection and composition classification algorithm and then examine the vertical and spatial distribution of PSCs in the Arctic and Antarctic on vortex-wide scales for entire PSC seasons over the more than nine-year data record from 2006- 2015.

Near real-time finite fault source inversion for moderate-large earthquakes in Taiwan using teleseismic P waveform

NASA Astrophysics Data System (ADS)

Wong, T. P.; Lee, S. J.; Gung, Y.

2017-12-01

Taiwan is located at one of the most active tectonic regions in the world. Rapid estimation of the spatial slip distribution of moderate-large earthquake (Mw6.0) is important for emergency response. It is necessary to have a real-time system to provide the report immediately after earthquake happen. The earthquake activities in the vicinity of Taiwan can be monitored by Real-Time Moment Tensor Monitoring System (RMT) which provides the rapid focal mechanism and source parameters. In this study, we follow up the RMT system to develop a near real-time finite fault source inversion system for the moderate-large earthquakes occurred in Taiwan. The system will be triggered by the RMT System when an Mw6.0 is detected. According to RMT report, our system automatically determines the fault dimension, record length, and rise time. We adopted one segment fault plane with variable rake angle. The generalized ray theory was applied to calculate the Green's function for each subfault. The primary objective of the system is to provide the first order image of coseismic slip pattern and identify the centroid location on the fault plane. The performance of this system had been demonstrated by 23 big earthquakes occurred in Taiwan successfully. The results show excellent data fits and consistent with the solutions from other studies. The preliminary spatial slip distribution will be provided within 25 minutes after an earthquake occurred.

Spatial variations in Titan's atmospheric temperature: ALMA and Cassini comparisons from 2012 to 2015

NASA Astrophysics Data System (ADS)

Thelen, Alexander E.; Nixon, C. A.; Chanover, N. J.; Molter, E. M.; Cordiner, M. A.; Achterberg, R. K.; Serigano, J.; Irwin, P. G. J.; Teanby, N.; Charnley, S. B.

2018-06-01

Submillimeter emission lines of carbon monoxide (CO) in Titan's atmosphere provide excellent probes of atmospheric temperature due to the molecule's long chemical lifetime and stable, well constrained volume mixing ratio. Here we present the analysis of 4 datasets obtained with the Atacama Large Millimeter/Submillimeter Array (ALMA) in 2012, 2013, 2014, and 2015 that contain strong CO rotational transitions. Utilizing ALMA's high spatial resolution in the 2012, 2014, and 2015 observations, we extract spectra from 3 separate regions on Titan's disk using datasets with beam sizes ranging from 0.35 × 0.28″ to 0.39 × 0.34″. Temperature profiles retrieved by the NEMESIS radiative transfer code are compared to Cassini Composite Infrared Spectrometer (CIRS) and radio occultation science results from similar latitude regions. Disk-averaged temperature profiles stay relatively constant from year to year, while small seasonal variations in atmospheric temperature are present from 2012 to 2015 in the stratosphere and mesosphere ( ∼ 100-500 km) of spatially resolved regions. We measure the stratopause (320 km) to increase in temperature by 5 K in northern latitudes from 2012 to 2015, while temperatures rise throughout the stratosphere at lower latitudes. We observe generally cooler temperatures in the lower stratosphere ( ∼ 100 km) than those obtained through Cassini radio occultation measurements, with the notable exception of warming in the northern latitudes and the absence of previous instabilities; both of these results are indicators that Titan's lower atmosphere responds to seasonal effects, particularly at higher latitudes. While retrieved temperature profiles cover a range of latitudes in these observations, deviations from CIRS nadir maps and radio occultation measurements convolved with the ALMA beam-footprint are not found to be statistically significant, and discrepancies are often found to be less than 5 K throughout the atmosphere. ALMA's excellent sensitivity in the lower stratosphere (60-300 km) provides a highly complementary dataset to contemporary CIRS and radio science observations, including altitude regions where both of those measurement sets contain large uncertainties. The demonstrated utility of CO emission lines in the submillimeter as a tracer of Titan's atmospheric temperature lays the groundwork for future studies of other molecular species - particularly those that exhibit strong polar abundance enhancements or are pressure-broadened in the lower atmosphere, as temperature profiles are found to consistently vary with latitude in all three years by up to 15 K.

Women's Skills Linked to Estrogen Levels.

ERIC Educational Resources Information Center

Weiss, R.

1988-01-01

Summarizes the result of research which considers the effect of women's hormone level on specific skills. Reports that low estrogen levels allow women to excel at spatial skills, but perform poorly at complex motor tasks and speech articulation. Discusses some implications and further research ideas. (YP)

Cox process representation and inference for stochastic reaction-diffusion processes

NASA Astrophysics Data System (ADS)

Schnoerr, David; Grima, Ramon; Sanguinetti, Guido

2016-05-01

Complex behaviour in many systems arises from the stochastic interactions of spatially distributed particles or agents. Stochastic reaction-diffusion processes are widely used to model such behaviour in disciplines ranging from biology to the social sciences, yet they are notoriously difficult to simulate and calibrate to observational data. Here we use ideas from statistical physics and machine learning to provide a solution to the inverse problem of learning a stochastic reaction-diffusion process from data. Our solution relies on a non-trivial connection between stochastic reaction-diffusion processes and spatio-temporal Cox processes, a well-studied class of models from computational statistics. This connection leads to an efficient and flexible algorithm for parameter inference and model selection. Our approach shows excellent accuracy on numeric and real data examples from systems biology and epidemiology. Our work provides both insights into spatio-temporal stochastic systems, and a practical solution to a long-standing problem in computational modelling.

BIOCHEMISTRY OF MOBILE ZINC AND NITRIC OXIDE REVEALED BY FLUORESCENT SENSORS

PubMed Central

Pluth, Michael D.; Tomat, Elisa; Lippard, Stephen J.

2010-01-01

Biologically mobile zinc and nitric oxide (NO) are two prominent examples of inorganic compounds involved in numerous signaling pathways in living systems. In the past decade, a synergy of regulation, signaling, and translocation of these two species has emerged in several areas of human physiology, providing additional incentive for developing adequate detection systems for Zn(II) ions and NO in biological specimens. Fluorescent probes for both of these bioinorganic analytes provide excellent tools for their detection, with high spatial and temporal resolution. We review the most widely used fluorescent sensors for biological zinc and nitric oxide, together with promising new developments and unmet needs of contemporary Zn(II) and NO biological imaging. The interplay between zinc and nitric oxide in the nervous, cardiovascular, and immune systems is highlighted to illustrate the contributions of selective fluorescent probes to the study of these two important bioinorganic analytes. PMID:21675918

Development and experimental testing of an optical micro-spectroscopic technique incorporating true line-scan excitation.

PubMed

Biener, Gabriel; Stoneman, Michael R; Acbas, Gheorghe; Holz, Jessica D; Orlova, Marianna; Komarova, Liudmila; Kuchin, Sergei; Raicu, Valerică

2013-12-27

Multiphoton micro-spectroscopy, employing diffraction optics and electron-multiplying CCD (EMCCD) cameras, is a suitable method for determining protein complex stoichiometry, quaternary structure, and spatial distribution in living cells using Förster resonance energy transfer (FRET) imaging. The method provides highly resolved spectra of molecules or molecular complexes at each image pixel, and it does so on a timescale shorter than that of molecular diffusion, which scrambles the spectral information. Acquisition of an entire spectrally resolved image, however, is slower than that of broad-bandwidth microscopes because it takes longer times to collect the same number of photons at each emission wavelength as in a broad bandwidth. Here, we demonstrate an optical micro-spectroscopic scheme that employs a laser beam shaped into a line to excite in parallel multiple sample voxels. The method presents dramatically increased sensitivity and/or acquisition speed and, at the same time, has excellent spatial and spectral resolution, similar to point-scan configurations. When applied to FRET imaging using an oligomeric FRET construct expressed in living cells and consisting of a FRET acceptor linked to three donors, the technique based on line-shaped excitation provides higher accuracy compared to the point-scan approach, and it reduces artifacts caused by photobleaching and other undesired photophysical effects.

Multiparameter spatio-thermochemical probing of flame–wall interactions advanced with coherent Raman imaging

DOE PAGES

Bohlin, Gustav Alexis; Jainski, Christopher; Patterson, Brian D.; ...

2016-08-10

Ultrabroadband coherent anti-Stokes Ra man spectroscopy (CARS) has been developed for one -dimensional imaging of temperature and major species distributions simultaneously in the near-wall region of a methane/air flame supported on a side-wall-quenching (SWQ) burner. Automatic temporal and spatial overlap of the ~7 femtosecond pump and Stokes pulses is achieved utilizing a two-beam CARS phase-matching scheme, and the crossed ~75 picosecond probe beam provide s excellent spatial sectioning of the probed location. Concurrent detection of N 2, O 2, H 2, CO, CO 2, and CH 4 is demonstrated while high-fidelity flame thermometry is assessed from the N 2 puremore » rotational S-branch in a one-dimensional -CARS imaging configuration. A methane/air premixed flame at lean, stoichiometric, and rich conditions ( Φ = 0.83, 1.0 , and 1.2) and Reynolds number = 5,000 is probed as it quenches against a cooled steel side- wall parallel to the flow providing a persistent flame-wall interaction. Here, an imaging resolution of better than 40 μm is achieved across the field -of-view, thus allowing thermochemical states (temperature and major species) of the thermal boundary layer to be resolved to within ~30 μm of the interface.« less

Multiparameter spatio-thermochemical probing of flame–wall interactions advanced with coherent Raman imaging

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bohlin, Gustav Alexis; Jainski, Christopher; Patterson, Brian D.

Ultrabroadband coherent anti-Stokes Ra man spectroscopy (CARS) has been developed for one -dimensional imaging of temperature and major species distributions simultaneously in the near-wall region of a methane/air flame supported on a side-wall-quenching (SWQ) burner. Automatic temporal and spatial overlap of the ~7 femtosecond pump and Stokes pulses is achieved utilizing a two-beam CARS phase-matching scheme, and the crossed ~75 picosecond probe beam provide s excellent spatial sectioning of the probed location. Concurrent detection of N 2, O 2, H 2, CO, CO 2, and CH 4 is demonstrated while high-fidelity flame thermometry is assessed from the N 2 puremore » rotational S-branch in a one-dimensional -CARS imaging configuration. A methane/air premixed flame at lean, stoichiometric, and rich conditions ( Φ = 0.83, 1.0 , and 1.2) and Reynolds number = 5,000 is probed as it quenches against a cooled steel side- wall parallel to the flow providing a persistent flame-wall interaction. Here, an imaging resolution of better than 40 μm is achieved across the field -of-view, thus allowing thermochemical states (temperature and major species) of the thermal boundary layer to be resolved to within ~30 μm of the interface.« less

Synchrotron-based X-ray microscopic studies for bioeffects of nanomaterials.

PubMed

Zhu, Ying; Cai, Xiaoqing; Li, Jiang; Zhong, Zengtao; Huang, Qing; Fan, Chunhai

2014-04-01

There have been increasing interests in studying biological effects of nanomaterials, which are nevertheless faced up with many challenges due to the nanoscale dimensions and unique chemical properties of nanomaterials. Synchrotron-based X-ray microscopy, an advanced imaging technology with high spatial resolution and excellent elemental specificity, provides a new platform for studying interactions between nanomaterials and living systems. In this article, we review the recent progress of X-ray microscopic studies on bioeffects of nanomaterials in several living systems including cells, model organisms, animals and plants. We aim to provide an overview of the state of the art, and the advantages of using synchrotron-based X-ray microscopy for characterizing in vitro and in vivo behaviors and biodistribution of nanomaterials. We also expect that the use of a combination of new synchrotron techniques should offer unprecedented opportunities for better understanding complex interactions at the nano-biological interface and accounting for unique bioeffects of nanomaterials. Synchrotron-based X-ray microscopy is a non-destructive imaging technique that enables high resolution spatial mapping of metals with elemental level detection methods. This review summarizes the current use and perspectives of this novel technique in studying the biology and tissue interactions of nanomaterials. Copyright © 2014 Elsevier Inc. All rights reserved.

Automatic correction of echo-planar imaging (EPI) ghosting artifacts in real-time interactive cardiac MRI using sensitivity encoding.

PubMed

Kim, Yoon-Chul; Nielsen, Jon-Fredrik; Nayak, Krishna S

2008-01-01

To develop a method that automatically corrects ghosting artifacts due to echo-misalignment in interleaved gradient-echo echo-planar imaging (EPI) in arbitrary oblique or double-oblique scan planes. An automatic ghosting correction technique was developed based on an alternating EPI acquisition and the phased-array ghost elimination (PAGE) reconstruction method. The direction of k-space traversal is alternated at every temporal frame, enabling lower temporal-resolution ghost-free coil sensitivity maps to be dynamically estimated. The proposed method was compared with conventional one-dimensional (1D) phase correction in axial, oblique, and double-oblique scan planes in phantom and cardiac in vivo studies. The proposed method was also used in conjunction with two-fold acceleration. The proposed method with nonaccelerated acquisition provided excellent suppression of ghosting artifacts in all scan planes, and was substantially more effective than conventional 1D phase correction in oblique and double-oblique scan planes. The feasibility of real-time reconstruction using the proposed technique was demonstrated in a scan protocol with 3.1-mm spatial and 60-msec temporal resolution. The proposed technique with nonaccelerated acquisition provides excellent ghost suppression in arbitrary scan orientations without a calibration scan, and can be useful for real-time interactive imaging, in which scan planes are frequently changed with arbitrary oblique orientations.

Microsphere-Based Seamless Scaffolds Containing Macroscopic Gradients of Encapsulated Factors for Tissue Engineering

PubMed Central

Singh, Milind; Morris, Casey P.; Ellis, Ryan J.; Detamore, Michael S.

2008-01-01

Spatial and temporal control of bioactive signals in three-dimensional (3D) tissue engineering scaffolds is greatly desired. Coupled together, these attributes may mimic and maintain complex signal patterns, such as those observed during axonal regeneration or neovascularization. Seamless polymer constructs may provide a route to achieve spatial control of signal distribution. In this study, a novel microparticle-based scaffold fabrication technique is introduced as a method to create 3D scaffolds with spatial control over model dyes using uniform poly(D,L-lactide-co-glycolide) microspheres. Uniform microspheres were produced using the Precision Particle Fabrication technique. Scaffolds were assembled by flowing microsphere suspensions into a cylindrical glass mold, and then microspheres were physically attached to form a continuous scaffold using ethanol treatment. An ethanol soak of 1 h was found to be optimum for improved mechanical characteristics. Morphological and physical characterization of the scaffolds revealed that microsphere matrices were porous (41.1 ± 2.1%) and well connected, and their compressive stiffness ranged from 142 to 306 kPa. Culturing chondrocytes on the scaffolds revealed the compatibility of these substrates with cell attachment and viability. In addition, bilayered, multilayered, and gradient scaffolds were fabricated, exhibiting excellent spatial control and resolution. Such novel scaffolds can serve as sustained delivery devices of heterogeneous signals in a continuous and seamless manner, and may be particularly useful in future interfacial tissue engineering investigations. PMID:18795865

On simultaneous tilt and creep observations on the San Andreas Fault

USGS Publications Warehouse

Johnston, M.J.S.; McHugh, S.; Burford, S.

1976-01-01

THE installation of an array of tiltmeters along the San Andreas Fault 1 has provided an excellent opportunity to study the amplitude and spatial scale of the tilt fields associated with fault creep. We report here preliminary results from, and some implications of, a search for interrelated surface tilts and creep event observations at four pairs of tiltmeters and creepmeters along an active 20-km stretch of the San Andreas Fault. We have observed clear creep-related tilts above the instrument resolution (10 -8 rad) only on a tiltmeter less than 0.5 km from the fault. The tilt events always preceded surface creep observations by 2-12 min, and were not purely transient in character. ?? 1975 Nature Publishing Group.

Cloud Optical Depth Measured with Ground-Based, Uncooled Infrared Imagers

NASA Technical Reports Server (NTRS)

Shaw, Joseph A.; Nugent, Paul W.; Pust, Nathan J.; Redman, Brian J.; Piazzolla, Sabino

2012-01-01

Recent advances in uncooled, low-cost, long-wave infrared imagers provide excellent opportunities for remotely deployed ground-based remote sensing systems. However, the use of these imagers in demanding atmospheric sensing applications requires that careful attention be paid to characterizing and calibrating the system. We have developed and are using several versions of the ground-based "Infrared Cloud Imager (ICI)" instrument to measure spatial and temporal statistics of clouds and cloud optical depth or attenuation for both climate research and Earth-space optical communications path characterization. In this paper we summarize the ICI instruments and calibration methodology, then show ICI-derived cloud optical depths that are validated using a dual-polarization cloud lidar system for thin clouds (optical depth of approximately 4 or less).

Imaging galectin-3 dependent endocytosis with lattice light-sheet microscopy

NASA Astrophysics Data System (ADS)

Baek, Jongho; Lou, Jieqiong; Coelho, Simao; Lim, Yean Jin; Seidlitz, Silvia; Nicovich, Philip R.; Wunder, Christian; Johannes, Ludger; Gaus, Katharina

2017-04-01

Lattice light-sheet (LLS) microscopy provides ultrathin light sheets of a two-dimensional optical lattice that allows us imaging three-dimensional (3D) objects for hundreds of time points at sub-second intervals and at or below the diffraction limit. Galectin-3 (Gal3), a carbohydrate-binding protein, triggers glycosphingolipid (GSL)-dependent biogenesis of morphologically distinct endocytic vesicles that are cargo specific and clathrin independent. In this study, we apply LLS microscopy to study the dynamics of Gal3 dependent endocytosis in live T cells. This will allow us to observe Gal3-mediated endocytosis at high temporal and excellent 3D spatial resolution, which may shed light on our understanding of the mechanism and physiological function of Gal3-induced endocytosis.

Magneto-photo-acoustic imaging

PubMed Central

Qu, Min; Mallidi, Srivalleesha; Mehrmohammadi, Mohammad; Truby, Ryan; Homan, Kimberly; Joshi, Pratixa; Chen, Yun-Sheng; Sokolov, Konstantin; Emelianov, Stanislav

2011-01-01

Magneto-photo-acoustic imaging, a technique based on the synergy of magneto-motive ultrasound, photoacoustic and ultrasound imaging, is introduced. Hybrid nanoconstructs, liposomes encapsulating gold nanorods and iron oxide nanoparticles, were used as a dual-contrast agent for magneto-photo-acoustic imaging. Tissue-mimicking phantom and macrophage cells embedded in ex vivo porcine tissue were used to demonstrate that magneto-photo-acoustic imaging is capable of visualizing the location of cells or tissues labeled with dual-contrast nanoparticles with sufficient contrast, excellent contrast resolution and high spatial resolution in the context of the anatomical structure of the surrounding tissues. Therefore, magneto-photo-acoustic imaging is capable of identifying the nanoparticle-labeled pathological regions from the normal tissue, providing a promising platform to noninvasively diagnose and characterize pathologies. PMID:21339883

Lava flow-field morphology: A case study from Mount Etna, Sicily

NASA Technical Reports Server (NTRS)

Guest, J. E.; Hughes, J. W.; Duncan, A. M.

1987-01-01

The morphology of lava flows is often taken as an indicator of the broad chemical composition of the lava, especially when interpreting extraterrestrial volcanoes using spacecraft images. The historical lavas of the active volcano Mount Etna in Sicily provide an excellent opportunity to examine the controls on flow field morphology. In this study only flow produced by flank eruptions after the middle of the 18th century are examined. The final form of a flow-field may be more indicative of the internal plumbing of the volcano, which may control such factors as the effusion, rate, duration of eruption, volume of available magma, rate of de-gassing, and lava rheology. Different flow morphologies on Etna appear to be a good indicator of differing conditions within the volcanic pile. Thus the spatial distribution of different flow types on an extraterrestrial volcano may provide useful information about the plumbing conditions of that volcano, rather than necessarily providing information on the composition of materials erupted.

The degenerative cervical spine.

PubMed

Llopis, E; Belloch, E; León, J P; Higueras, V; Piquer, J

2016-04-01

Imaging techniques provide excellent anatomical images of the cervical spine. The choice to use one technique or another will depend on the clinical scenario and on the treatment options. Plain-film X-rays continue to be fundamental, because they make it possible to evaluate the alignment and bone changes; they are also useful for follow-up after treatment. The better contrast resolution provided by magnetic resonance imaging makes it possible to evaluate the soft tissues, including the intervertebral discs, ligaments, bone marrow, and spinal cord. The role of computed tomography in the study of degenerative disease has changed in recent years owing to its great spatial resolution and its capacity to depict osseous components. In this article, we will review the anatomy and biomechanical characteristics of the cervical spine, and then we provide a more detailed discussion of the degenerative diseases that can affect the cervical spine and their clinical management. Copyright © 2015 SERAM. Published by Elsevier España, S.L.U. All rights reserved.

GIS methods for sustainable stormwater harvesting and storage using remote sensing for land cover data - location assessment.

PubMed

Mahmoud, Shereif H; Alazba, A A; Adamowski, J; El-Gindy, A M

2015-09-01

Identification of potential sites for rainwater harvesting (RWH) is an important step toward maximizing water availability and land productivity in arid semiarid regions. Characterised as a "water scarce" country, Egypt has limited fresh water supplies, and is expected to suffer from water stress by the year 2030. Therefore, it is important to develop any means available to supply water and maintain human habitability in a sustainable manner. Practiced or simply indispensable in many countries around the world, rainwater harvesting (RWH) promotes a sustainable and efficient manner of exploiting water resources. In the present study, suitable areas for sustainable stormwater harvesting and storage in Egypt were identified using remote sensing for land cover data - location assessment linked to a decision support system (DSS). The DSS took into consideration a combination of thematic layers such as rainfall surplus, slope, potential runoff coefficient (PRC), land cover/use, and soil texture. Taking into account five thematic layers, the spatial extents of RWH suitability areas were identified by an analytical hierarchy process (AHP). The model generated a RWH map with five categories of suitability: excellent, good, moderate, poor and unsuitable. The spatial distribution of these categories in the area investigated was such that 4.8% (47910 km(2)) and 14% (139739 km(2)) of the study area was classified as excellent or good in terms of RWH, respectively, while 30.1% (300439 km(2)), 47.6% (474116 km(2)) and 3.5% (34935 km(2)) of the area were classified as moderate, unsuitable and poor, respectively. Most of the areas with excellent to good suitability had slopes of between 2% and 8% and were intensively cultivated areas. The major soil type in the excellent suitability areas was loam, while rainfall ranged from 100 to 200 mm yr(-1). The use of a number of RWH sites in the excellent areas is recommended to ensure successful implementation of RWH systems.

Choroid plexus implants rescue Alzheimer's disease-like pathologies by modulating amyloid-β degradation.

PubMed

Bolos, Marta; Antequera, Desireé; Aldudo, Jesús; Kristen, Henrike; Bullido, María Jesús; Carro, Eva

2014-08-01

The choroid plexuses (CP) release numerous biologically active enzymes and neurotrophic factors, and contain a subpopulation of neural progenitor cells providing the capacity to proliferate and differentiate into other types of cells. These characteristics make CP epithelial cells (CPECs) excellent candidates for cell therapy aiming at restoring brain tissue in neurodegenerative illnesses, including Alzheimer's disease (AD). In the present study, using in vitro approaches, we demonstrated that CP were able to diminish amyloid-β (Aβ) levels in cell cultures, reducing Aβ-induced neurotoxicity. For in vivo studies, CPECs were transplanted into the brain of the APP/PS1 murine model of AD that exhibits advanced Aβ accumulation and memory impairment. Brain examination after cell implantation revealed a significant reduction in brain Aβ deposits, hyperphosphorylation of tau, and astrocytic reactivity. Remarkably, the transplantation of CPECs was accompanied by a total behavioral recovery in APP/PS1 mice, improving spatial and non-spatial memory. These findings reinforce the neuroprotective potential of CPECs and the use of cell therapies as useful tools in AD.

Photometric Repeatability of Scanned Imagery: UVIS

NASA Astrophysics Data System (ADS)

Shanahan, Clare E.; McCullough, Peter; Baggett, Sylvia

2017-08-01

We provide the preliminary results of a study on the photometric repeatability of spatial scans of bright, isolated white dwarf stars with the UVIS channel of the Wide Field Camera 3 (WFC3) on the Hubble Space Telescope (HST). We analyze straight-line scans from the first pair of identical orbits of HST program 14878 to assess if sub 0.1% repeatability can be attained with WFC3/UVIS. This study is motivated by the desire to achieve better signal-to-noise in the UVIS contamination and stability monitor, in which observations of standard stars in staring mode have been taken from the installation of WFC3 in 2009 to the present to assess temporal photometric stability. Higher signal to noise in this program would greatly benefit the sensitivity to detect contamination, and to better characterize the observed small throughput drifts over time. We find excellent repeatability between identical visits of program 14878, with sub 0.1% repeatability achieved in most filters. These! results support the initiative to transition the staring mode UVIS contamination and photometric stability monitor from staring mode images to spatial scans.

Solutions of the Taylor-Green Vortex Problem Using High-Resolution Explicit Finite Difference Methods

NASA Technical Reports Server (NTRS)

DeBonis, James R.

2013-01-01

A computational fluid dynamics code that solves the compressible Navier-Stokes equations was applied to the Taylor-Green vortex problem to examine the code s ability to accurately simulate the vortex decay and subsequent turbulence. The code, WRLES (Wave Resolving Large-Eddy Simulation), uses explicit central-differencing to compute the spatial derivatives and explicit Low Dispersion Runge-Kutta methods for the temporal discretization. The flow was first studied and characterized using Bogey & Bailley s 13-point dispersion relation preserving (DRP) scheme. The kinetic energy dissipation rate, computed both directly and from the enstrophy field, vorticity contours, and the energy spectra are examined. Results are in excellent agreement with a reference solution obtained using a spectral method and provide insight into computations of turbulent flows. In addition the following studies were performed: a comparison of 4th-, 8th-, 12th- and DRP spatial differencing schemes, the effect of the solution filtering on the results, the effect of large-eddy simulation sub-grid scale models, and the effect of high-order discretization of the viscous terms.

High refractive index immersion liquid for superresolution 3D imaging using sapphire-based aplanatic numerical aperture increasing lens optics.

PubMed

Laskar, Junaid M; Shravan Kumar, P; Herminghaus, Stephan; Daniels, Karen E; Schröter, Matthias

2016-04-20

Optically transparent immersion liquids with refractive index (n∼1.77) to match the sapphire-based aplanatic numerical aperture increasing lens (aNAIL) are necessary for achieving deep 3D imaging with high spatial resolution. We report that antimony tribromide (SbBr₃) salt dissolved in liquid diiodomethane (CH₂I₂) provides a new high refractive index immersion liquid for optics applications. The refractive index is tunable from n=1.74 (pure) to n=1.873 (saturated), by adjusting either salt concentration or temperature; this allows it to match (or even exceed) the refractive index of sapphire. Importantly, the solution gives excellent light transmittance in the ultraviolet to near-infrared range, an improvement over commercially available immersion liquids. This refractive-index-matched immersion liquid formulation has enabled us to develop a sapphire-based aNAIL objective that has both high numerical aperture (NA=1.17) and long working distance (WD=12  mm). This opens up new possibilities for deep 3D imaging with high spatial resolution.

The Belle-II Depfet Pixel Detector at the Superkekb Flavour Factory

NASA Astrophysics Data System (ADS)

Heindl, Stefan

2012-08-01

The ongoing upgrade of the asymmetric electron positron collider KEKB also requires extensive detector upgrades to cope with the new design luminosity of 8 · 1035 cm-2 · s-1 · Of critical importance is the new silicon pixel vertex tracker, which will significantly improve the decay vertex resolution, crucial for time dependent CP violation measurements. This new detector will consist of two layers of DEPFET pixel seii8ors very close to the interaction point. These sensors combine both particle detection and amplification of the signal by embedding a field effect transistor into a 75 μm thick fully depleted silicon substrate, providing very high signal to noise ratios and excellent spatial resolution. Using this technology satisfies the given requirements of extremely low material and high radiation tolerance at the new Belle II experiment. The power dissipation due to continuous readout at high rate and spatial constraints also give strict requirements for the mechanical support and cooling of the new detector. We will discuss the overall concept of the pixel vertex tracker, its expected performance and the challenging mechanical integration.

Spectral performance of DEPFET and gateable DEPFET macropixel devices

NASA Astrophysics Data System (ADS)

Bähr, A.; Aschauer, S.; Bergbauer, B.; Hermenau, K.; Lauf, T.; Lechner, P.; Lutz, G.; Majewski, P.; Meidinger, N.; Miessner, D.; Porro, M.; Richter, R.; Schaller, G.; Schopper, F.; Stefanescu, A.; Strüder, L.; Treis, J.

2014-03-01

Future x-ray observatories, such as the proposed ATHENA+ mission, will investigate bright and rapidly evolving radiation sources. To reach the scientific goals, high speed, spatial resolving sensors with excellent spectroscopic performance are mandatory. Well suited for this task are matrices of Depleted P-channel Field Effect Transistors (DEPFETs). DEPFETs provide intrinsic signal amplification, 100 percent fill factor, charge storage capability and a low read noise. Previous studies of DEPFET matrices of 256 × 256 pixels demonstrated an excellent energy resolution of 126 eV FWHM at 5.9 keV (compared to the theoretical Fano limit 120 eV). Usually these matrices are read out on demand, using e.g. the ASTEROID ASIC. Because the DEPFET is always sensitive, charge collected during the readout, causes so called misfits, which increase the background. For low frame rates this can be neglected. However, for fast timings, as suggested for ATHENA+, this effect reduces the spectral performance. We will present measurements on DEPFET macropixel structures, read out using a semi-Gaussian shaper, which demonstrate the excellent spectroscopic performance of these devices. Furthermore we will investigate the effect of misfits on the spectral background of DEPFET devices read out on demand. These measurements show the necessity to suppress misfits when the devices are operated for fast timing modes. As will be shown this can be done using so called gateable DEPFETs. The general advantage of gateable DEPFETs at fast timings, in terms of peak-to-background ratio will be demonstrated.

The NPOESS Crosstrack Infrared Sounder (CrIS) and Advanced Technology Microwave Sounder (ATMS) as a Companion to the New Generation AIRS/AMSU and IASI/AMSU Sounder Suites

NASA Astrophysics Data System (ADS)

Bingham, G. E.; Pougatchev, N. S.; Zavyalov, V.; Esplin, M.; Blackwell, W. J.; Barnet, C.

2009-12-01

The NPOESS Preparatory Project is serving the operations and research community as the bridge mission between the Earth Observing System and the National Polar-orbiting Operational Environmental Satellite System. The Cross-track Infrared Sounder (CrIS), combined with the Advanced Technology Microwave Sounder (ATMS) are the core instruments to provide the key performance temperature and humidity profiles (along with some other atmospheric constituent information). Both the high spectral resolution CrIS and the upgraded microwave sounder (ATMS) will be working in parallel with already orbiting Advanced Atmospheric Infrared Sounder (AIRS/AMSU) on EOS AQUA platform and Infrared Atmospheric Sounding Interferometer (IASI/AMSU) on METOP-A satellite. This presentation will review the CrIS/ATMS capabilities in the context of continuity with the excellent performance records established by AIRS and IASI. The CrIS sensor is in the process of its final calibration and characterization testing and the results and Sensor Data Record process are being validated against this excellent dataset. The comparison between CrIS, AIRS, and IASI will include spectral, spatial, radiometric performance and sounding capability comparisons.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kirtley, John R., E-mail: jkirtley@stanford.edu; Rosenberg, Aaron J.; Palmstrom, Johanna C.

Superconducting QUantum Interference Device (SQUID) microscopy has excellent magnetic field sensitivity, but suffers from modest spatial resolution when compared with other scanning probes. This spatial resolution is determined by both the size of the field sensitive area and the spacing between this area and the sample surface. In this paper we describe scanning SQUID susceptometers that achieve sub-micron spatial resolution while retaining a white noise floor flux sensitivity of ≈2μΦ{sub 0}/Hz{sup 1/2}. This high spatial resolution is accomplished by deep sub-micron feature sizes, well shielded pickup loops fabricated using a planarized process, and a deep etch step that minimizes themore » spacing between the sample surface and the SQUID pickup loop. We describe the design, modeling, fabrication, and testing of these sensors. Although sub-micron spatial resolution has been achieved previously in scanning SQUID sensors, our sensors not only achieve high spatial resolution but also have integrated modulation coils for flux feedback, integrated field coils for susceptibility measurements, and batch processing. They are therefore a generally applicable tool for imaging sample magnetization, currents, and susceptibilities with higher spatial resolution than previous susceptometers.« less

Automated extraction and validation of children's gait parameters with the Kinect.

PubMed

Motiian, Saeid; Pergami, Paola; Guffey, Keegan; Mancinelli, Corrie A; Doretto, Gianfranco

2015-12-02

Gait analysis for therapy regimen prescription and monitoring requires patients to physically access clinics with specialized equipment. The timely availability of such infrastructure at the right frequency is especially important for small children. Besides being very costly, this is a challenge for many children living in rural areas. This is why this work develops a low-cost, portable, and automated approach for in-home gait analysis, based on the Microsoft Kinect. A robust and efficient method for extracting gait parameters is introduced, which copes with the high variability of noisy Kinect skeleton tracking data experienced across the population of young children. This is achieved by temporally segmenting the data with an approach based on coupling a probabilistic matching of stride template models, learned offline, with the estimation of their global and local temporal scaling. A preliminary study conducted on healthy children between 2 and 4 years of age is performed to analyze the accuracy, precision, repeatability, and concurrent validity of the proposed method against the GAITRite when measuring several spatial and temporal children's gait parameters. The method has excellent accuracy and good precision, with segmenting temporal sequences of body joint locations into stride and step cycles. Also, the spatial and temporal gait parameters, estimated automatically, exhibit good concurrent validity with those provided by the GAITRite, as well as very good repeatability. In particular, on a range of nine gait parameters, the relative and absolute agreements were found to be good and excellent, and the overall agreements were found to be good and moderate. This work enables and validates the automated use of the Kinect for children's gait analysis in healthy subjects. In particular, the approach makes a step forward towards developing a low-cost, portable, parent-operated in-home tool for clinicians assisting young children.

Middle-aged human apoE4 targeted-replacement mice show retention deficits on a wide range of spatial memory tasks.

PubMed

Bour, Alexandra; Grootendorst, Jeannette; Vogel, Elise; Kelche, Christian; Dodart, Jean-Cosme; Bales, Kelly; Moreau, Pierre-Henri; Sullivan, Patrick M; Mathis, Chantal

2008-11-21

Apolipoprotein (apo) E4, one of three human apoE (h-apoE) isoforms, has been identified as a major genetic risk factor for Alzheimer's disease and for cognitive deficits associated with aging. However, the biological mechanisms involving apoE in learning and memory processes are unclear. A potential isoform-dependent role of apoE in cognitive processes was studied in human apoE targeted-replacement (TR) mice. These mice express either the human apoE3 or apoE4 gene under the control of endogenous murine apoE regulatory sequences, resulting in physiological expression of h-apoE in both a temporal and spatial pattern similar to humans. Male and female apoE3-TR, apoE4-TR, apoE-knockout and C57BL/6J mice (15-18 months) were tested with spatial memory and avoidance conditioning tasks. Compared to apoE3-TR mice, spatial memory in female apoE4-TR mice was impaired based on their poor performances in; (i) the probe test of the water-maze reference memory task, (ii) the water-maze working memory task and (iii) an active avoidance Y-maze task. Retention performance on a passive avoidance task was also impaired in apoE4-TR mice, but not in other genotypes. These deficits in both spatial and avoidance memory tasks may be related to the anatomical and functional abnormalities previously reported in the hippocampus and the amygdala of apoE4-TR mice. We conclude that the apoE4-TR mice provide an excellent model for understanding the mechanisms underlying apoE4-dependent susceptibility to cognitive decline.

Least-cost transportation networks predict spatial interaction of invasion vectors.

PubMed

Drake, D Andrew R; Mandrak, Nicholas E

2010-12-01

Human-mediated dispersal among aquatic ecosystems often results in biotic transfer between drainage basins. Such activities may circumvent biogeographic factors, with considerable ecological, evolutionary, and economic implications. However, the efficacy of predictions concerning community changes following inter-basin movements are limited, often because the dispersal mechanism is poorly understood (e.g., quantified only partially). To date, spatial-interaction models that predict the movement of humans as vectors of biotic transfer have not incorporated patterns of human movement through transportation networks. As a necessary first step to determine the role of anglers as invasion vectors across a land-lake ecosystem, we investigate their movement potential within Ontario, Canada. To determine possible model improvements resulting from inclusion of network travel, spatial-interaction models were constructed using standard Euclidean (e.g., straight-line) distance measures and also with distances derived from least-cost routing of human transportation networks. Model comparisons determined that least-cost routing both provided the most parsimonious model and also excelled at forecasting spatial interactions, with a proportion of 0.477 total movement deviance explained. The distribution of movements was characterized by many relatively short to medium travel distances (median = 292.6 km) with fewer lengthier distances (75th percentile = 484.6 km, 95th percentile = 775.2 km); however, even the shortest movements were sufficient to overcome drainage-basin boundaries. Ranking of variables in order of their contribution within the most parsimonious model determined that distance traveled, origin outflow, lake attractiveness, and sportfish richness significantly influence movement patterns. Model improvements associated with least-cost routing of human transportation networks imply that patterns of human-mediated invasion are fundamentally linked to the spatial configuration and relative impedance of human transportation networks, placing increased importance on understanding their contribution to the invasion process.

Cardiac and pericardial tumors: A potential application of positron emission tomography-magnetic resonance imaging.

PubMed

Fathala, Ahmed; Abouzied, Mohei; AlSugair, Abdul-Aziz

2017-07-26

Cardiac and pericardial masses may be neoplastic, benign and malignant, non-neoplastic such as thrombus or simple pericardial cysts, or normal variants cardiac structure can also be a diagnostic challenge. Currently, there are several imaging modalities for diagnosis of cardiac masses; each technique has its inherent advantages and disadvantages. Echocardiography, is typically the initial test utilizes in such cases, Echocardiography is considered the test of choice for evaluation and detection of cardiac mass, it is widely available, portable, with no ionizing radiation and provides comprehensive evaluation of cardiac function and valves, however, echocardiography is not very helpful in many cases such as evaluation of extracardiac extension of mass, poor tissue characterization, and it is non diagnostic in some cases. Cross sectional imaging with cardiac computed tomography provides a three dimensional data set with excellent spatial resolution but utilizes ionizing radiation, intravenous iodinated contrast and relatively limited functional evaluation of the heart. Cardiac magnetic resonance imaging (CMR) has excellent contrast resolution that allows superior soft tissue characterization. CMR offers comprehensive evaluation of morphology, function, tissue characterization. The great benefits of CMR make CMR a highly useful tool in the assessment of cardiac masses. (Fluorine 18) fluorodeoxygluocse (FDG) positron emission tomography (PET) has become a corner stone in several oncological application such as tumor staging, restaging, treatment efficiency, FDG is a very useful imaging modality in evaluation of cardiac masses. A recent advance in the imaging technology has been the development of integrated PET-MRI system that utilizes the advantages of PET and MRI in a single examination. FDG PET-MRI provides complementary information on evaluation of cardiac masses. The purpose of this review is to provide several clinical scenarios on the incremental value of PET and MRI in the evaluation of cardiac masses.

Implant positioning in TKA: comparison between conventional and patient-specific instrumentation.

PubMed

Ferrara, Ferdinando; Cipriani, Antonio; Magarelli, Nicola; Rapisarda, Santi; De Santis, Vincenzo; Burrofato, Aaron; Leone, Antonio; Bonomo, Lorenzo

2015-04-01

The number of total knee arthroplasty (TKA) procedures continuously increases, with good to excellent results. In the last few years, new surgical techniques have been developed to improve prosthesis positioning. In this context, patient-specific instrumentation is included. The goal of this study was to compare the perioperative parameters and the spatial positioning of prosthetic components in TKA procedures performed with patient-specific instrumentation vs traditional TKA. In this prospective comparative randomized study, 15 patients underwent TKA with 3-dimensional magnetic resonance imaging (MRI) preoperative planning (patient-specific instrumentation group) and 15 patients underwent traditional TKA (non-patient-specific instrumentation group). All patients underwent postoperative computed tomography (CT) examination. In the patient-specific instrumentation group, preoperative data planning regarding femoral and tibial bone resection was correlated with intraoperative measurements. Surgical time, length of hospitalization, and intraoperative and postoperative bleeding were compared between the 2 groups. Positioning of implants on postoperative CT was assessed for both groups. Data planned with 3-dimensional MRI regarding the depth of bone cuts showed good to excellent correlation with intraoperative measurements. The patient-specific instrumentation group showed better perioperative outcomes and good correlation between the spatial positioning of prosthetic components planned preoperatively and that seen on postoperative CT. Less variability was found in the patient-specific instrumentation group than in the non-patient-specific instrumentation group in spatial orientation of prosthetic components. Preoperative planning with 3-dimensional MRI in TKA has a better perioperative outcome compared with the traditional method. Use of patient-specific instrumentation can also improve the spatial positioning of both prosthetic components. Copyright 2015, SLACK Incorporated.

Coronal Heating and the Need for High-Resolution Observations

NASA Technical Reports Server (NTRS)

Klimchuk, James A.

2008-01-01

Despite excellent progress in recent years in understanding coronal heating, there remain many crucial questions that are still unanswered. Limitations in the observations are one important reason. Both theoretical and observational considerations point to the importance of small spatial scales, impulsive energy release, strong dynamics, and extreme plasma nonuniformity. As a consequence, high spatial resolution, broad temperature coverage, high temperature fidelity, and sensitivity to velocities and densities are all critical observational parameters. Current instruments lack one or more of these properties, and this has led to considerable ambiguity and confusion. In this talk, I will discuss recent ideas about coronal heating and emphasize that high spatial resolution observations, especially spectroscopic observations, are needed to make major progress on this important problem.

Spatial But Not Oculomotor Information Biases Perceptual Memory: Evidence From Face Perception and Cognitive Modeling.

PubMed

Wantz, Andrea L; Lobmaier, Janek S; Mast, Fred W; Senn, Walter

2017-08-01

Recent research put forward the hypothesis that eye movements are integrated in memory representations and are reactivated when later recalled. However, "looking back to nothing" during recall might be a consequence of spatial memory retrieval. Here, we aimed at distinguishing between the effect of spatial and oculomotor information on perceptual memory. Participants' task was to judge whether a morph looked rather like the first or second previously presented face. Crucially, faces and morphs were presented in a way that the morph reactivated oculomotor and/or spatial information associated with one of the previously encoded faces. Perceptual face memory was largely influenced by these manipulations. We considered a simple computational model with an excellent match (4.3% error) that expresses these biases as a linear combination of recency, saccade, and location. Surprisingly, saccades did not play a role. The results suggest that spatial and temporal rather than oculomotor information biases perceptual face memory. Copyright © 2016 Cognitive Science Society, Inc.

S4EI (Spectral Sampling with Slicer for Stellar and Extragalactical Instrumentation), a new-generation of 3D spectro-imager dedicated to night astronomy

NASA Astrophysics Data System (ADS)

Sayède, Frédéric; Puech, Mathieu; Mein, Pierre; Bonifacio, Piercarlo; Malherbe, Jean-Marie; Galicher, Raphaël.; Amans, Jean-Philippe; Fasola, Gilles

2014-07-01

Multichannel Subtractive Double Pass (MSDP) spectrographs have been widely used in solar spectroscopy because of their ability to provide an excellent compromise between field of view and spatial and spectral resolutions. Compared with other types of spectrographs, MSDP can deliver simultaneous monochromatic images at higher spatial and spectral resolutions without any time-scanning requirement (as with Fabry-Perot spectrographs), and with limited loss of flux. These performances are obtained thanks to a double pass through the dispersive element. Recent advances with VPH (Volume phase holographic) Grisms as well as with image slicers now make MSDP potentially sensitive to much smaller fluxes. We present S4EI (Spectral Sampling with Slicer for Stellar and Extragalactical Instrumentation), which is a new concept for extending MSDP to night-time astronomy. It is based on new generation reflecting plane image slicers working with large apertures specific to night-time telescopes. The resulting design could be potentially very attractive and innovative for different domains of astronomy, e.g., the simultaneous spatial mapping of accurately flux-calibrated emission lines between OH sky lines in extragalactic astronomy or the simultaneous imaging of stars, exoplanets and interstellar medium. We present different possible MSDP/S4EI configurations for these science cases and expected performances on telescopes such as the VLT.

Light propagation with phase discontinuities: generalized laws of reflection and refraction.

PubMed

Yu, Nanfang; Genevet, Patrice; Kats, Mikhail A; Aieta, Francesco; Tetienne, Jean-Philippe; Capasso, Federico; Gaburro, Zeno

2011-10-21

Conventional optical components rely on gradual phase shifts accumulated during light propagation to shape light beams. New degrees of freedom are attained by introducing abrupt phase changes over the scale of the wavelength. A two-dimensional array of optical resonators with spatially varying phase response and subwavelength separation can imprint such phase discontinuities on propagating light as it traverses the interface between two media. Anomalous reflection and refraction phenomena are observed in this regime in optically thin arrays of metallic antennas on silicon with a linear phase variation along the interface, which are in excellent agreement with generalized laws derived from Fermat's principle. Phase discontinuities provide great flexibility in the design of light beams, as illustrated by the generation of optical vortices through use of planar designer metallic interfaces.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guiriec, S.; Kouveliotou, C.; Hartmann, D. H.

The origin of prompt emission from gamma-ray bursts (GRBs) remains to be an open question. Correlated prompt optical and γ -ray emission observed in a handful of GRBs strongly suggests a common emission region, but failure to adequately fit the broadband GRB spectrum prompted the hypothesis of different emission mechanisms for the low- and high-energy radiations. We demonstrate that our multi-component model for GRB γ -ray prompt emission provides an excellent fit to GRB 110205A from optical to γ -ray energies. Our results show that the optical and highest γ -ray emissions have the same spatial and spectral origin, whichmore » is different from the bulk of the X- and softest γ -ray radiation. Finally, our accurate redshift estimate for GRB 110205A demonstrates promise for using GRBs as cosmological standard candles.« less

Continuous EEG monitoring in the intensive care unit.

PubMed

Scheuer, Mark L

2002-01-01

Continuous EEG (CEEG) monitoring allows uninterrupted assessment of cerebral cortical activity with good spatial resolution and excellent temporal resolution. Thus, this procedure provides a means of constantly assessing brain function in critically ill obtunded and comatose patients. Recent advances in digital EEG acquisition, storage, quantitative analysis, and transmission have made CEEG monitoring in the intensive care unit (ICU) technically feasible and useful. This article summarizes the indications and methodology of CEEG monitoring in the ICU, and discusses the role of some quantitative EEG analysis techniques in near real-time remote observation of CEEG recordings. Clinical examples of CEEG use, including monitoring of status epilepticus, assessment of ongoing therapy for treatment of seizures in critically ill patients, and monitoring for cerebral ischemia, are presented. Areas requiring further development of CEEG monitoring techniques and indications are discussed.

Simulation of spatially evolving turbulence and the applicability of Taylor's hypothesis in compressible flow

NASA Technical Reports Server (NTRS)

Lee, Sangsan; Lele, Sanjiva K.; Moin, Parviz

1992-01-01

For the numerical simulation of inhomogeneous turbulent flows, a method is developed for generating stochastic inflow boundary conditions with a prescribed power spectrum. Turbulence statistics from spatial simulations using this method with a low fluctuation Mach number are in excellent agreement with the experimental data, which validates the procedure. Turbulence statistics from spatial simulations are also compared to those from temporal simulations using Taylor's hypothesis. Statistics such as turbulence intensity, vorticity, and velocity derivative skewness compare favorably with the temporal simulation. However, the statistics of dilatation show a significant departure from those obtained in the temporal simulation. To directly check the applicability of Taylor's hypothesis, space-time correlations of fluctuations in velocity, vorticity, and dilatation are investigated. Convection velocities based on vorticity and velocity fluctuations are computed as functions of the spatial and temporal separations. The profile of the space-time correlation of dilatation fluctuations is explained via a wave propagation model.

Standing variation in spatially growing populations

NASA Astrophysics Data System (ADS)

Fusco, Diana; Gralka, Matti; Kayser, Jona; Hallatschek, Oskar

Patterns of genetic diversity not only reflect the evolutionary history of a species but they can also determine the evolutionary response to environmental change. For instance, the standing genetic diversity of a microbial population can be key to rescue in the face of an antibiotic attack. While genetic diversity is in general shaped by both demography and evolution, very little is understood when both factors matter, as e.g. for biofilms with pronounced spatial organization. Here, we quantitatively explore patterns of genetic diversity by using microbial colonies and well-mixed test tube populations as antipodal model systems with extreme and very little spatial structure, respectively. We find that Eden model simulations and KPZ theory can remarkably reproduce the genetic diversity in microbial colonies obtained via population sequencing. The excellent agreement allows to draw conclusions on the resilience of spatially-organized populations and to uncover new strategies to contain antibiotic resistance.

Spatial Characteristics of Geothermal Spring Temperatures and Discharge Rates in the Tatun Volcanic Area, Taiwan

NASA Astrophysics Data System (ADS)

Jang, C. S.; Liu, C. W.

2014-12-01

The Tatun volcanic area is the only potential volcanic geothermal region in the Taiwan island, and abundant in hot spring resources owing to stream water mixing with fumarolic gases. According to the Meinzer's classification, spring temperatures and discharge rates are the most important properties for characterizing spring classifications. This study attempted to spatially characterize spring temperatures and discharge rates in the Tatun volcanic area, Taiwanusing indicator kriging (IK). First, data on spring temperatures and discharge rates, which were collected from surveyed data of the Taipei City Government, were divided into high, moderate and low categories according to spring classification criteria, and the various categories were regarded as estimation thresholds. Then, IK was adopted to model occurrence probabilities of specified temperatures and discharge rates in springs, and to determine their classifications based on estimated probabilities. Finally, nine combinations were obtained from the classifications of temperatures and discharge rates in springs. Moreover, the combinations and features of spring water were spatially quantified according to seven sub-zones of spring utilization. A suitable and sustainable development strategy of the spring area was proposed in each sub-zone based on probability-based combinations and features of spring water.The research results reveal that the probability-based classifications using IK provide an excellent insight in exploring the uncertainty of spatial features in springs, and can provide Taiwanese government administrators with detailed information on sustainable spring utilization and conservation in the overexploited spring tourism areas. The sub-zones BT (Beitou), RXY (Rd. Xingyi), ZSL (Zhongshanlou) and LSK (Lengshuikeng) with high or moderate discharge rates are suitable to supply spring water for tourism hotels.Local natural hot springs should be planned in the sub-zones DBT (Dingbeitou), ZSL, XYK (Xiayoukeng), and MC (Macao) with low discharge rates, and low or moderate temperatures, particularly in riverbeds or valleys.Keywords: Spring; Temperature; Discharge rate; Indicator kriging; Uncertainty

Dissecting a new connection between cytokinin and jasmonic acid in control of leaf growth

USDA-ARS?s Scientific Manuscript database

Plant growth is mediated by two cellular processes: division and elongation. The maize leaf is an excellent model to study plant growth since these processes are spatially separated into discreet zones - a division zone (DZ), transition zone (TZ), and elongation zone (EZ) - at the base of the leaf. ...

The Geography of Access and Excellence: Spatial Diversity in Higher Education System Design

ERIC Educational Resources Information Center

Metcalfe, Amy Scott

2009-01-01

In a "settler society" such as Canada, inequalities in higher education have geo-political dimensions, necessitating a theoretical framework that considers the geographic distribution of material wealth and power. This paper explores both the economic and social implications of the geographical distribution of the higher education system…

Lost in Translation: Cross-Cultural Experiences in Teaching Geo-Genealogy

ERIC Educational Resources Information Center

Longley, Paul A.; Singleton, Alex D.; Yano, Keiji; Nakaya, Tomoki

2010-01-01

This paper reports on a cross-cultural outreach activity of the current UK "Spatial Literacy in Teaching" (SPLINT) Centre of Excellence in Teaching and Learning (CETL), a past UK Economic and Social Research Council (ESRC) grant, and shared interests in family names between Japanese and UK academics. It describes a pedagogic programme…

Risk assessment of groundwater level variability using variable Kriging methods

NASA Astrophysics Data System (ADS)

Spanoudaki, Katerina; Kampanis, Nikolaos A.

2015-04-01

Assessment of the water table level spatial variability in aquifers provides useful information regarding optimal groundwater management. This information becomes more important in basins where the water table level has fallen significantly. The spatial variability of the water table level in this work is estimated based on hydraulic head measured during the wet period of the hydrological year 2007-2008, in a sparsely monitored basin in Crete, Greece, which is of high socioeconomic and agricultural interest. Three Kriging-based methodologies are elaborated in Matlab environment to estimate the spatial variability of the water table level in the basin. The first methodology is based on the Ordinary Kriging approach, the second involves auxiliary information from a Digital Elevation Model in terms of Residual Kriging and the third methodology calculates the probability of the groundwater level to fall below a predefined minimum value that could cause significant problems in groundwater resources availability, by means of Indicator Kriging. The Box-Cox methodology is applied to normalize both the data and the residuals for improved prediction results. In addition, various classical variogram models are applied to determine the spatial dependence of the measurements. The Matérn model proves to be the optimal, which in combination with Kriging methodologies provides the most accurate cross validation estimations. Groundwater level and probability maps are constructed to examine the spatial variability of the groundwater level in the basin and the associated risk that certain locations exhibit regarding a predefined minimum value that has been set for the sustainability of the basin's groundwater resources. Acknowledgement The work presented in this paper has been funded by the Greek State Scholarships Foundation (IKY), Fellowships of Excellence for Postdoctoral Studies (Siemens Program), 'A simulation-optimization model for assessing the best practices for the protection of surface water and groundwater in the coastal zone', (2013 - 2015). Varouchakis, E. A. and D. T. Hristopulos (2013). "Improvement of groundwater level prediction in sparsely gauged basins using physical laws and local geographic features as auxiliary variables." Advances in Water Resources 52: 34-49. Kitanidis, P. K. (1997). Introduction to geostatistics, Cambridge: University Press.

Optimization of Decision-Making for Spatial Sampling in the North China Plain, Based on Remote-Sensing a Priori Knowledge

NASA Astrophysics Data System (ADS)

Feng, J.; Bai, L.; Liu, S.; Su, X.; Hu, H.

2012-07-01

In this paper, the MODIS remote sensing data, featured with low-cost, high-timely and moderate/low spatial resolutions, in the North China Plain (NCP) as a study region were firstly used to carry out mixed-pixel spectral decomposition to extract an useful regionalized indicator parameter (RIP) (i.e., an available ratio, that is, fraction/percentage, of winter wheat planting area in each pixel as a regionalized indicator variable (RIV) of spatial sampling) from the initial selected indicators. Then, the RIV values were spatially analyzed, and the spatial structure characteristics (i.e., spatial correlation and variation) of the NCP were achieved, which were further processed to obtain the scalefitting, valid a priori knowledge or information of spatial sampling. Subsequently, founded upon an idea of rationally integrating probability-based and model-based sampling techniques and effectively utilizing the obtained a priori knowledge or information, the spatial sampling models and design schemes and their optimization and optimal selection were developed, as is a scientific basis of improving and optimizing the existing spatial sampling schemes of large-scale cropland remote sensing monitoring. Additionally, by the adaptive analysis and decision strategy the optimal local spatial prediction and gridded system of extrapolation results were able to excellently implement an adaptive report pattern of spatial sampling in accordance with report-covering units in order to satisfy the actual needs of sampling surveys.

Wall-pressure fluctuations beneath a spatially evolving turbulent boundary layer

NASA Astrophysics Data System (ADS)

Mahesh, Krishnan; Kumar, Praveen

2016-11-01

Wall-pressure fluctuations beneath a turbulent boundary layer are important in applications dealing with structural deformation and acoustics. Simulations are performed for flat plate and axisymmetric, spatially evolving zero-pressure-gradient turbulent boundary layers at inflow Reynolds number of 1400 and 2200 based on momentum thickness. The simulations generate their own inflow using the recycle-rescale method. The results for mean velocity and second-order statistics show excellent agreement with the data available in literature. The spectral characteristics of wall-pressure fluctuations and their relation to flow structure will be discussed. This work is supported by ONR.

CO2-Tea pulse clipping using pulsed high voltage preionization for high spatial resolution I.R. Lidar systems

NASA Astrophysics Data System (ADS)

Gasmi, Taieb

2018-04-01

An extra-cavity CO2-TEA laser pulse clipper for high spatial resolution atmospheric monitoring is presented. The clipper uses pulsed high voltageto facilitate the breakdown of the gas within the clipper cell. Complete extinction of the nitrogen tail, that degrades the range resolution of LIDARS, is obtained at pressures from 375 up to 1500 Torr for nitrogen and argon gases whereas an attenuation coefficient of almost 102 is achieved for helium. Excellent energy stability and pulse width repeatability were achieved using high voltage pre-ionized gas technique.

Efficient Optical Energy Harvesting in Self-Accelerating Beams

PubMed Central

Bongiovanni, Domenico; Hu, Yi; Wetzel, Benjamin; Robles, Raul A.; Mendoza González, Gregorio; Marti-Panameño, Erwin A.; Chen, Zhigang; Morandotti, Roberto

2015-01-01

We report the experimental observation of energetically confined self-accelerating optical beams propagating along various convex trajectories. We show that, under an appropriate transverse compression of their spatial spectra, these self-accelerating beams can exhibit a dramatic enhancement of their peak intensity and a significant decrease of their transverse expansion, yet retaining both the expected acceleration profile and the intrinsic self-healing properties. We found our experimental results to be in excellent agreement with the numerical simulations. We expect further applications in such contexts where power budget and optimal spatial confinement can be important limiting factors. PMID:26299360

The solar eclipse: a natural meteorological experiment

PubMed Central

2016-01-01

A solar eclipse provides a well-characterized reduction in solar radiation, of calculable amount and duration. This captivating natural astronomical phenomenon is ideally suited to science outreach activities, but the predictability of the change in solar radiation also provides unusual conditions for assessing the atmospheric response to a known stimulus. Modern automatic observing networks used for weather forecasting and atmospheric research have dense spatial coverage, so the quantitative meteorological responses to an eclipse can now be evaluated with excellent space and time resolution. Numerical models representing the atmosphere at high spatial resolution can also be used to predict eclipse-related changes and interpret the observations. Combining the models with measurements yields the elements of a controlled atmospheric experiment on a regional scale (10–1000 km), which is almost impossible to achieve by other means. This modern approach to ‘eclipse meteorology’ as identified here can ultimately improve weather prediction models and be used to plan for transient reductions in renewable electricity generation. During the 20 March 2015 eclipse, UK electrical energy demand increased by about 3 GWh (11 TJ) or about 4%, alongside reductions in the wind and photovoltaic electrical energy generation of 1.5 GWh (5.5 TJ). This article is part of the themed issue ‘Atmospheric effects of solar eclipses stimulated by the 2015 UK eclipse’. PMID:27550768

Performance evaluation of the small-animal PET scanner ClairvivoPET using NEMA NU 4-2008 Standards.

PubMed

Sato, K; Shidahara, M; Watabe, H; Watanuki, S; Ishikawa, Y; Arakawa, Y; Nai, Y H; Furumoto, S; Tashiro, M; Shoji, T; Yanai, K; Gonda, K

2016-01-21

The aim of this study was to evaluate the performance of ClairvivoPET using NEMA NU4 standards. The ClairvivoPET incorporates a LYSO dual depth-of-interaction detector system with 151 mm axial field of view (FOV). Spatial resolution, sensitivity, counting rate capabilities, and image quality were evaluated using NEMA NU4-2008 standards. Normal mouse imaging was also performed for 10 min after intravenous injection of (18)F(-)-NaF. Data were compared with 19 other preclinical PET scanners. Spatial resolution measured using full width at half maximum on FBP-ramp reconstructed images was 2.16 mm at radial offset 5 mm of the axial centre FOV. The maximum absolute sensitivity for a point source at the FOV centre was 8.72%. Peak noise equivalent counting rate (NECR) was 415 kcps at 14.6 MBq ml(-1). The uniformity with the image-quality phantom was 4.62%. Spillover ratios in the images of air and water filled chambers were 0.19 and 0.06, respectively. Our results were comparable with the 19 other preclinical PET scanners based on NEMA NU4 standards, with excellent sensitivity because of the large FOV. The ClairvivoPET with iterative reconstruction algorithm also provided sufficient visualization of the mouse spine. The high sensitivity and resolution of the ClairvivoPET scanner provided high quality images for preclinical studies.

Performance evaluation of the small-animal PET scanner ClairvivoPET using NEMA NU 4-2008 Standards

NASA Astrophysics Data System (ADS)

Sato, K.; Shidahara, M.; Watabe, H.; Watanuki, S.; Ishikawa, Y.; Arakawa, Y.; Nai, YH; Furumoto, S.; Tashiro, M.; Shoji, T.; Yanai, K.; Gonda, K.

2016-01-01

The aim of this study was to evaluate the performance of ClairvivoPET using NEMA NU4 standards. The ClairvivoPET incorporates a LYSO dual depth-of-interaction detector system with 151 mm axial field of view (FOV). Spatial resolution, sensitivity, counting rate capabilities, and image quality were evaluated using NEMA NU4-2008 standards. Normal mouse imaging was also performed for 10min after intravenous injection of 18F(-)-NaF. Data were compared with 19 other preclinical PET scanners. Spatial resolution measured using full width at half maximum on FBP-ramp reconstructed images was 2.16 mm at radial offset 5 mm of the axial centre FOV. The maximum absolute sensitivity for a point source at the FOV centre was 8.72%. Peak noise equivalent counting rate (NECR) was 415kcps at 14.6MBq ml-1. The uniformity with the image-quality phantom was 4.62%. Spillover ratios in the images of air and water filled chambers were 0.19 and 0.06, respectively. Our results were comparable with the 19 other preclinical PET scanners based on NEMA NU4 standards, with excellent sensitivity because of the large FOV. The ClairvivoPET with iterative reconstruction algorithm also provided sufficient visualization of the mouse spine. The high sensitivity and resolution of the ClairvivoPET scanner provided high quality images for preclinical studies.

Silicon detectors for combined MR-PET and MR-SPECT imaging

NASA Astrophysics Data System (ADS)

Studen, A.; Brzezinski, K.; Chesi, E.; Cindro, V.; Clinthorne, N. H.; Cochran, E.; Grošičar, B.; Grkovski, M.; Honscheid, K.; Kagan, H.; Lacasta, C.; Llosa, G.; Mikuž, M.; Stankova, V.; Weilhammer, P.; Žontar, D.

2013-02-01

Silicon based devices can extend PET-MR and SPECT-MR imaging to applications, where their advantages in performance outweigh benefits of high statistical counts. Silicon is in many ways an excellent detector material with numerous advantages, among others: excellent energy and spatial resolution, mature processing technology, large signal to noise ratio, relatively low price, availability, versatility and malleability. The signal in silicon is also immune to effects of magnetic field at the level normally used in MR devices. Tests in fields up to 7 T were performed in a study to determine effects of magnetic field on positron range in a silicon PET device. The curvature of positron tracks in direction perpendicular to the field's orientation shortens the distance between emission and annihilation point of the positron. The effect can be fully appreciated for a rotation of the sample for a fixed field direction, compressing range in all dimensions. A popular Ga-68 source was used showing a factor of 2 improvement in image noise compared to zero field operation. There was also a little increase in noise as the reconstructed resolution varied between 2.5 and 1.5 mm. A speculative applications can be recognized in both emission modalities, SPECT and PET. Compton camera is a subspecies of SPECT, where a silicon based scatter as a MR compatible part could inserted into the MR bore and the secondary detector could operate in less constrained environment away from the magnet. Introducing a Compton camera also relaxes requirements of the radiotracers used, extending the range of conceivable photon energies beyond 140.5 keV of the Tc-99m. In PET, one could exploit the compressed sub-millimeter range of positrons in the magnetic field. To exploit the advantage, detectors with spatial resolution commensurate to the effect must be used with silicon being an excellent candidate. Measurements performed outside of the MR achieving spatial resolution below 1 mm are reported.

Ultra-short pulse delivery at high average power with low-loss hollow core fibers coupled to TRUMPF's TruMicro laser platforms for industrial applications

NASA Astrophysics Data System (ADS)

Baumbach, S.; Pricking, S.; Overbuschmann, J.; Nutsch, S.; Kleinbauer, J.; Gebs, R.; Tan, C.; Scelle, R.; Kahmann, M.; Budnicki, A.; Sutter, D. H.; Killi, A.

2017-02-01

Multi-megawatt ultrafast laser systems at micrometer wavelength are commonly used for material processing applications, including ablation, cutting and drilling of various materials or cleaving of display glass with excellent quality. There is a need for flexible and efficient beam guidance, avoiding free space propagation of light between the laser head and the processing unit. Solid core step index fibers are only feasible for delivering laser pulses with peak powers in the kW-regime due to the optical damage threshold in bulk silica. In contrast, hollow core fibers are capable of guiding ultra-short laser pulses with orders of magnitude higher peak powers. This is possible since a micro-structured cladding confines the light within the hollow core and therefore minimizes the spatial overlap between silica and the electro-magnetic field. We report on recent results of single-mode ultra-short pulse delivery over several meters in a lowloss hollow core fiber packaged with industrial connectors. TRUMPF's ultrafast TruMicro laser platforms equipped with advanced temperature control and precisely engineered opto-mechanical components provide excellent position and pointing stability. They are thus perfectly suited for passive coupling of ultra-short laser pulses into hollow core fibers. Neither active beam launching components nor beam trackers are necessary for a reliable beam delivery in a space and cost saving packaging. Long term tests with weeks of stable operation, excellent beam quality and an overall transmission efficiency of above 85 percent even at high average power confirm the reliability for industrial applications.

Distribution of randomly diffusing particles in inhomogeneous media

NASA Astrophysics Data System (ADS)

Li, Yiwei; Kahraman, Osman; Haselwandter, Christoph A.

2017-09-01

Diffusion can be conceptualized, at microscopic scales, as the random hopping of particles between neighboring lattice sites. In the case of diffusion in inhomogeneous media, distinct spatial domains in the system may yield distinct particle hopping rates. Starting from the master equations (MEs) governing diffusion in inhomogeneous media we derive here, for arbitrary spatial dimensions, the deterministic lattice equations (DLEs) specifying the average particle number at each lattice site for randomly diffusing particles in inhomogeneous media. We consider the case of free (Fickian) diffusion with no steric constraints on the maximum particle number per lattice site as well as the case of diffusion under steric constraints imposing a maximum particle concentration. We find, for both transient and asymptotic regimes, excellent agreement between the DLEs and kinetic Monte Carlo simulations of the MEs. The DLEs provide a computationally efficient method for predicting the (average) distribution of randomly diffusing particles in inhomogeneous media, with the number of DLEs associated with a given system being independent of the number of particles in the system. From the DLEs we obtain general analytic expressions for the steady-state particle distributions for free diffusion and, in special cases, diffusion under steric constraints in inhomogeneous media. We find that, in the steady state of the system, the average fraction of particles in a given domain is independent of most system properties, such as the arrangement and shape of domains, and only depends on the number of lattice sites in each domain, the particle hopping rates, the number of distinct particle species in the system, and the total number of particles of each particle species in the system. Our results provide general insights into the role of spatially inhomogeneous particle hopping rates in setting the particle distributions in inhomogeneous media.

Gbm.auto: A software tool to simplify spatial modelling and Marine Protected Area planning

PubMed Central

Officer, Rick; Clarke, Maurice; Reid, David G.; Brophy, Deirdre

2017-01-01

Boosted Regression Trees. Excellent for data-poor spatial management but hard to use Marine resource managers and scientists often advocate spatial approaches to manage data-poor species. Existing spatial prediction and management techniques are either insufficiently robust, struggle with sparse input data, or make suboptimal use of multiple explanatory variables. Boosted Regression Trees feature excellent performance and are well suited to modelling the distribution of data-limited species, but are extremely complicated and time-consuming to learn and use, hindering access for a wide potential user base and therefore limiting uptake and usage. BRTs automated and simplified for accessible general use with rich feature set We have built a software suite in R which integrates pre-existing functions with new tailor-made functions to automate the processing and predictive mapping of species abundance data: by automating and greatly simplifying Boosted Regression Tree spatial modelling, the gbm.auto R package suite makes this powerful statistical modelling technique more accessible to potential users in the ecological and modelling communities. The package and its documentation allow the user to generate maps of predicted abundance, visualise the representativeness of those abundance maps and to plot the relative influence of explanatory variables and their relationship to the response variables. Databases of the processed model objects and a report explaining all the steps taken within the model are also generated. The package includes a previously unavailable Decision Support Tool which combines estimated escapement biomass (the percentage of an exploited population which must be retained each year to conserve it) with the predicted abundance maps to generate maps showing the location and size of habitat that should be protected to conserve the target stocks (candidate MPAs), based on stakeholder priorities, such as the minimisation of fishing effort displacement. Gbm.auto for management in various settings By bridging the gap between advanced statistical methods for species distribution modelling and conservation science, management and policy, these tools can allow improved spatial abundance predictions, and therefore better management, decision-making, and conservation. Although this package was built to support spatial management of a data-limited marine elasmobranch fishery, it should be equally applicable to spatial abundance modelling, area protection, and stakeholder engagement in various scenarios. PMID:29216310

[Development of a Text-Data Based Learning Tool That Integrates Image Processing and Displaying].

PubMed

Shinohara, Hiroyuki; Hashimoto, Takeyuki

2015-01-01

We developed a text-data based learning tool that integrates image processing and displaying by Excel. Knowledge required for programing this tool is limited to using absolute, relative, and composite cell references and learning approximately 20 mathematical functions available in Excel. The new tool is capable of resolution translation, geometric transformation, spatial-filter processing, Radon transform, Fourier transform, convolutions, correlations, deconvolutions, wavelet transform, mutual information, and simulation of proton density-, T1-, and T2-weighted MR images. The processed images of 128 x 128 pixels or 256 x 256 pixels are observed directly within Excel worksheets without using any particular image display software. The results of image processing using this tool were compared with those using C language and the new tool was judged to have sufficient accuracy to be practically useful. The images displayed on Excel worksheets were compared with images using binary-data display software. This comparison indicated that the image quality of the Excel worksheets was nearly equal to the latter in visual impressions. Since image processing is performed by using text-data, the process is visible and facilitates making contrasts by using mathematical equations within the program. We concluded that the newly developed tool is adequate as a computer-assisted learning tool for use in medical image processing.

Experimental evaluation and basis function optimization of the spatially variant image-space PSF on the Ingenuity PET/MR scanner

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kotasidis, Fotis A., E-mail: Fotis.Kotasidis@unige.ch; Zaidi, Habib; Geneva Neuroscience Centre, Geneva University, CH-1205 Geneva

2014-06-15

Purpose: The Ingenuity time-of-flight (TF) PET/MR is a recently developed hybrid scanner combining the molecular imaging capabilities of PET with the excellent soft tissue contrast of MRI. It is becoming common practice to characterize the system's point spread function (PSF) and understand its variation under spatial transformations to guide clinical studies and potentially use it within resolution recovery image reconstruction algorithms. Furthermore, due to the system's utilization of overlapping and spherical symmetric Kaiser-Bessel basis functions during image reconstruction, its image space PSF and reconstructed spatial resolution could be affected by the selection of the basis function parameters. Hence, a detailedmore » investigation into the multidimensional basis function parameter space is needed to evaluate the impact of these parameters on spatial resolution. Methods: Using an array of 12 × 7 printed point sources, along with a custom made phantom, and with the MR magnet on, the system's spatially variant image-based PSF was characterized in detail. Moreover, basis function parameters were systematically varied during reconstruction (list-mode TF OSEM) to evaluate their impact on the reconstructed resolution and the image space PSF. Following the spatial resolution optimization, phantom, and clinical studies were subsequently reconstructed using representative basis function parameters. Results: Based on the analysis and under standard basis function parameters, the axial and tangential components of the PSF were found to be almost invariant under spatial transformations (∼4 mm) while the radial component varied modestly from 4 to 6.7 mm. Using a systematic investigation into the basis function parameter space, the spatial resolution was found to degrade for basis functions with a large radius and small shape parameter. However, it was found that optimizing the spatial resolution in the reconstructed PET images, while having a good basis function superposition and keeping the image representation error to a minimum, is feasible, with the parameter combination range depending upon the scanner's intrinsic resolution characteristics. Conclusions: Using the printed point source array as a MR compatible methodology for experimentally measuring the scanner's PSF, the system's spatially variant resolution properties were successfully evaluated in image space. Overall the PET subsystem exhibits excellent resolution characteristics mainly due to the fact that the raw data are not under-sampled/rebinned, enabling the spatial resolution to be dictated by the scanner's intrinsic resolution and the image reconstruction parameters. Due to the impact of these parameters on the resolution properties of the reconstructed images, the image space PSF varies both under spatial transformations and due to basis function parameter selection. Nonetheless, for a range of basis function parameters, the image space PSF remains unaffected, with the range depending on the scanner's intrinsic resolution properties.« less

SPATIAL DISTRIBUTION OF PAIR PRODUCTION OVER THE PULSAR POLAR CAP

DOE Office of Scientific and Technical Information (OSTI.GOV)

Belyaev, Mikhail A.; Parfrey, Kyle, E-mail: mbelyaev@berkeley.edu

2016-10-20

Using an analytic, axisymmetric approach that includes general relativity, coupled to a condition for pair production deduced from simulations, we derive general results about the spatial distribution of pair-producing field lines over the pulsar polar cap. In particular, we show that pair production on magnetic field lines operates over only a fraction of the polar cap for an aligned rotator for general magnetic field configurations, assuming the magnetic field varies spatially on a scale that is larger than the size of the polar cap. We compare our result to force-free simulations of a pulsar with a dipole surface field andmore » find excellent agreement. Our work has implications for first-principles simulations of pulsar magnetospheres and for explaining observations of pulsed radio and high-energy emission.« less

Linking innovative measurement technologies (ConMon and Dataflow© systems) for high-resolution temporal and spatial dissolved oxygen criteria assessment.

PubMed

O'Leary, C A; Perry, E; Bayard, A; Wainger, L; Boynton, W R

2015-10-01

One consequence of nutrient-induced eutrophication in shallow estuarine waters is the occurrence of hypoxia and anoxia that has serious impacts on biota, habitats, and biogeochemical cycles of important elements. Because of the important role of dissolved oxygen (DO) on these ecosystem features, a variety of DO criteria have been established as indicators of system condition. However, DO dynamics are complex and vary on time scales ranging from diel to decadal and spatial scales from meters to multiple kilometers. Because of these complexities, determining DO criteria attainment or failure remains difficult. We propose a method for linking two common measurement technologies for shallow water DO criteria assessment using a Chesapeake Bay tributary as a test case. Dataflow© is a spatially intensive (30-60-m collection intervals) system used to map surface water conditions at the whole estuary scale, and ConMon is a high-frequency (15-min collection intervals) fixed station approach. The former technology is effective with spatial descriptions but poor regarding temporal resolution, while the latter provides excellent temporal but very limited spatial resolution. Our methodology for combining the strengths of these measurement technologies involved a sequence of steps. First, a statistical model of surface water DO dynamics, based on temporally intense ConMon data, was developed. The results of this model were used to calculate daily DO minimum concentrations. Second, this model was then inserted into Dataflow©-generated spatial maps of DO conditions and used to adjust measured DO concentrations to daily minimum concentrations. This information was used to assess DO criteria compliance at the full tributary scale. Model results indicated that it is vital to consider the short-term time scale DO criteria across both space and time concurrently. Large fluctuations in DO occurred within a 24-h time period, and DO dynamics varied across the length and width of the tributary. The overall result provided a more detailed and realistic characterization of the shallow water DO minimum conditions that have the potential to be extended to other tributaries and regions. Broader applications of this model include instantaneous DO criteria assessment, utilizing this model in combination with aerial remote sensing, and developing DO amplitude as an indicator of impaired water bodies.

78 FR 16471 - National Cybersecurity Center of Excellence (NCCoE) Secure Exchange of Electronic Health...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-03-15

...-02] National Cybersecurity Center of Excellence (NCCoE) Secure Exchange of Electronic Health...) National Cybersecurity Center of Excellence (NCCoE) invited organizations to provide products and technical.... companies to enter into ``National Cybersecurity Excellence Partnerships'' (NCEPs) in furtherance of the...

Spatial Patterns in the Distribution, Diversity and Abundance of Benthic Foraminifera around Moorea (Society Archipelago, French Polynesia)

PubMed Central

2015-01-01

Coral reefs are now subject to global threats and influences from numerous anthropogenic sources. Foraminifera, a group of unicellular shelled organisms, are excellent indicators of water quality and reef health. Thus we studied a set of samples taken in 1992 to provide a foraminiferal baseline for future studies of environmental change. Our study provides the first island-wide analysis of shallow benthic foraminifera from around Moorea (Society Archipelago). We analyzed the composition, species richness, patterns of distribution and abundance of unstained foraminiferal assemblages from bays, fringing reefs, nearshore and back- and fore-reef environments. A total of 380 taxa of foraminifera were recorded, a number that almost doubles previous species counts. Spatial patterns of foraminiferal assemblages are characterized by numerical abundances of individual taxa, cluster groups and gradients of species richness, as documented by cluster, Fisher α, ternary plot and Principal Component Analyses (PCA). The inner bay inlets are dominated by stress-tolerant, mostly thin-shelled taxa of Bolivina, Bolivinella, Nonionoides, Elongobula, and Ammonia preferring low-oxygen and/or nutrient-rich habitats influenced by coastal factors such as fresh-water runoff and overhanging mangroves. The larger symbiont-bearing foraminifera (Borelis, Amphistegina, Heterostegina, Peneroplis) generally live in the oligotrophic, well-lit back- and fore-reef environments. Amphisteginids and peneroplids were among the few taxa found in the bay environments, probably due to their preferences for phytal substrates and tolerance to moderate levels of eutrophication. The fringing reef environments along the outer bay are characterized by Borelis schlumbergeri, Heterostegina depressa, Textularia spp. and various miliolids which represent a hotspot of diversity within the complex reef-lagoon system of Moorea. The high foraminiferal Fisher α and species richness diversity in outer bay fringing reefs is consistent with the disturbance-mosaic (microhabitat heterogeneity) hypothesis. Calculations of the FORAM Index (FI), a single metric index to assess reef vitality, indicate that all fore- and most back-reef environments support active carbonate accretion and provide habitat suitability for carbonate producers dependent on algal symbiosis. Lowest suitability values were recorded within the innermost bays, an area where natural and increasing anthropogenic influences continue to impact the reefs. The presence of habitat specific assemblages and numerical abundance values of individual taxa show that benthic foraminifera are excellent recorders of environmental perturbations and good indicators useful in modern and ancient ecological and environmental studies. PMID:26710320

Spatial Patterns in the Distribution, Diversity and Abundance of Benthic Foraminifera around Moorea (Society Archipelago, French Polynesia).

PubMed

Fajemila, Olugbenga T; Langer, Martin R; Lipps, Jere H

2015-01-01

Coral reefs are now subject to global threats and influences from numerous anthropogenic sources. Foraminifera, a group of unicellular shelled organisms, are excellent indicators of water quality and reef health. Thus we studied a set of samples taken in 1992 to provide a foraminiferal baseline for future studies of environmental change. Our study provides the first island-wide analysis of shallow benthic foraminifera from around Moorea (Society Archipelago). We analyzed the composition, species richness, patterns of distribution and abundance of unstained foraminiferal assemblages from bays, fringing reefs, nearshore and back- and fore-reef environments. A total of 380 taxa of foraminifera were recorded, a number that almost doubles previous species counts. Spatial patterns of foraminiferal assemblages are characterized by numerical abundances of individual taxa, cluster groups and gradients of species richness, as documented by cluster, Fisher α, ternary plot and Principal Component Analyses (PCA). The inner bay inlets are dominated by stress-tolerant, mostly thin-shelled taxa of Bolivina, Bolivinella, Nonionoides, Elongobula, and Ammonia preferring low-oxygen and/or nutrient-rich habitats influenced by coastal factors such as fresh-water runoff and overhanging mangroves. The larger symbiont-bearing foraminifera (Borelis, Amphistegina, Heterostegina, Peneroplis) generally live in the oligotrophic, well-lit back- and fore-reef environments. Amphisteginids and peneroplids were among the few taxa found in the bay environments, probably due to their preferences for phytal substrates and tolerance to moderate levels of eutrophication. The fringing reef environments along the outer bay are characterized by Borelis schlumbergeri, Heterostegina depressa, Textularia spp. and various miliolids which represent a hotspot of diversity within the complex reef-lagoon system of Moorea. The high foraminiferal Fisher α and species richness diversity in outer bay fringing reefs is consistent with the disturbance-mosaic (microhabitat heterogeneity) hypothesis. Calculations of the FORAM Index (FI), a single metric index to assess reef vitality, indicate that all fore- and most back-reef environments support active carbonate accretion and provide habitat suitability for carbonate producers dependent on algal symbiosis. Lowest suitability values were recorded within the innermost bays, an area where natural and increasing anthropogenic influences continue to impact the reefs. The presence of habitat specific assemblages and numerical abundance values of individual taxa show that benthic foraminifera are excellent recorders of environmental perturbations and good indicators useful in modern and ancient ecological and environmental studies.

GLASS: The Grism Lens-Amplified Survey From Space. HST Grism Spectroscopy of the Frontier Fields.

NASA Astrophysics Data System (ADS)

Borello Schmidt, Kasper

2015-08-01

The Grism Lens-Amplified Survey From Space (GLASS) is a 140 orbit spectroscopic survey of 10 massive galaxy clusters, including the six Hubble Frontier Fields. GLASS has observed the cluster cores in the HST-WFC3 G102 and G141 grisms providing a wide wavelength coverage in the near-infrared from roughly 0.8 - 1.7 μm. The parallel fields were observed through the optical ACS G800L grism. Taking advantage of the lensing magnification of the clusters, GLASS reaches excellent spectroscopic limits of ˜10-18 erg/s/cm2 and improved spatial resolution for lensed sources behind the clusters. These features are particularly useful for the three main science drivers of GLASS, which are: I) Use the hundreds of spectra of galaxies at z>6 to shed light on the epoch of reionization, the role galaxies play in reionizing the universe, and the Lyα escape fraction at the cosmic dawn. II) Study gas accretion, star formation, and outflows by spatially mapping resolved star formation and determine metallicity gradients from emission lines at z˜2. III) Explore the environmental dependence of galaxy evolution using the first comprehensive census of spatially resolved star formation in dense environments, i.e., the cluster cores as well as the cluster infall regions. The former two benefit highly from the improved depth and increased resolution provided by the cluster lensing. Apart from the main science drivers, a slew of ancillary science has been enabled by the survey. One particularly interesting example is the search for supernovae in the more than 40 GLASS visits, which resulted in the detection of the first multiple imaged supernova, SN Refsdal. I will present the survey, give an update on the current science results, in particular on the GLASS galaxies at the epoch of reionization, and provide a status report on the GLASS data releases, which are continuously being made available to the community.

Recent Advances in Techniques for Hyperspectral Image Processing

NASA Technical Reports Server (NTRS)

Plaza, Antonio; Benediktsson, Jon Atli; Boardman, Joseph W.; Brazile, Jason; Bruzzone, Lorenzo; Camps-Valls, Gustavo; Chanussot, Jocelyn; Fauvel, Mathieu; Gamba, Paolo; Gualtieri, Anthony;

The Advanced Telescope for High Energy Astrophysics

NASA Astrophysics Data System (ADS)

Guainazzi, Matteo

2017-08-01

Athena (the Advanced Telescope for High Energy Astrophysics) is a next generation X-ray observatory currently under study by ESA for launch in 2028. Athena is designed to address the Hot and Energetic Universe science theme, which addresses two key questions: 1) How did ordinary matter evolve into the large scale structures we see today? 2) How do black holes grow and shape the Universe. To address these topics Athena employs an innovative X-ray telescope based on Silicon Pore Optics technology to deliver extremely light weight and high throughput, while retaining excellent angular resolution. The mirror can be adjusted to focus onto one of two focal place instruments: the X-ray Integral Field Unit (X-IFU) which provides spatially-resolved, high resolution spectroscopy, and the Wide Field Imager (WFI) which provides spectral imaging over a large field of view, as well as high time resolution and count rate tolerance. Athena is currently in Phase A and the study status will be reviewed, along with the scientific motivations behind the mission.

High-contrast X-ray micro-tomography of low attenuation samples using large area hybrid semiconductor pixel detector array of 10 × 5 Timepix chips

NASA Astrophysics Data System (ADS)

Karch, J.; Krejci, F.; Bartl, B.; Dudak, J.; Kuba, J.; Kvacek, J.; Zemlicka, J.

2016-01-01

State-of-the-art hybrid pixel semiconductor detectors provide excellent imaging properties such as unlimited dynamic range, high spatial resolution, high frame rate and energy sensitivity. Nevertheless, a limitation in the use of these devices for imaging has been the small sensitive area of a few square centimetres. In the field of microtomography we make use of a large area pixel detector assembled from 50 Timepix edgeless chips providing fully sensitive area of 14.3 × 7.15 cm2. We have successfully demonstrated that the enlargement of the sensitive area enables high-quality tomographic measurements of whole objects with high geometrical magnification without any significant degradation in resulting reconstructions related to the chip tilling and edgeless sensor technology properties. The technique of micro-tomography with the newly developed large area detector is applied for samples formed by low attenuation, low contrast materials such a seed from Phacelia tanacetifolia, a charcoalified wood sample and a beeswax seal sample.

High-Resolution Microscopy-Coil MR Imaging of Skin Tumors: Techniques and Novel Clinical Applications.

PubMed

Budak, Matthew J; Weir-McCall, Jonathan R; Yeap, Phey M; White, Richard D; Waugh, Shelley A; Sudarshan, Thiru A P; Zealley, Ian A

2015-01-01

High-resolution magnetic resonance (MR) imaging performed with a microscopy coil is a robust radiologic tool for the evaluation of skin lesions. Microscopy-coil MR imaging uses a small surface coil and a 1.5-T or higher MR imaging system. Simple T1- and T2-weighted imaging protocols can be implemented to yield high-quality, high-spatial-resolution images that provide an excellent depiction of dermal anatomy. The primary application of microscopy-coil MR imaging is to delineate the deep margins of skin tumors, thereby providing a preoperative road map for dermatologic surgeons. This information is particularly useful for surgeons who perform Mohs micrographic surgery and in cases of nasofacial neoplasms, where the underlying anatomy is complex. Basal cell carcinoma is the most common nonmelanocytic skin tumor and has a predilection to manifest on the face, where it can be challenging to achieve complete surgical excision while preserving the cosmetic dignity of the patient. Microscopy-coil MR imaging provides dermatologic surgeons with valuable preoperative anatomic information that is not available at conventional clinical examination. ©RSNA, 2015.

Review of recent advances in analytical techniques for the determination of neurotransmitters

PubMed Central

Perry, Maura; Li, Qiang; Kennedy, Robert T.

2009-01-01

Methods and advances for monitoring neurotransmitters in vivo or for tissue analysis of neurotransmitters over the last five years are reviewed. The review is organized primarily by neurotransmitter type. Transmitter and related compounds may be monitored by either in vivo sampling coupled to analytical methods or implanted sensors. Sampling is primarily performed using microdialysis, but low-flow push-pull perfusion may offer advantages of spatial resolution while minimizing the tissue disruption associated with higher flow rates. Analytical techniques coupled to these sampling methods include liquid chromatography, capillary electrophoresis, enzyme assays, sensors, and mass spectrometry. Methods for the detection of amino acid, monoamine, neuropeptide, acetylcholine, nucleoside, and soluable gas neurotransmitters have been developed and improved upon. Advances in the speed and sensitivity of these methods have enabled improvements in temporal resolution and increased the number of compounds detectable. Similar advances have enabled improved detection at tissue samples, with a substantial emphasis on single cell and other small samples. Sensors provide excellent temporal and spatial resolution for in vivo monitoring. Advances in application to catecholamines, indoleamines, and amino acids have been prominent. Improvements in stability, sensitivity, and selectivity of the sensors have been of paramount interest. PMID:19800472

A noninvasive multimodal technique to monitor brain tumor vascularization

NASA Astrophysics Data System (ADS)

Saxena, Vishal; Gonzalez-Gomez, Ignacio; Laug, Walter E.

2007-09-01

Determination of tumor oxygenation at the microvascular level will provide important insight into tumor growth, angiogenesis, necrosis and therapeutic response and will facilitate to develop protocols for studying tumor behavior. The non-ionizing near infrared spectroscopy (NIRS) technique has the potential to differentiate lesion and hemoglobin dynamics; however, it has a limited spatial resolution. On the other hand, magnetic resonance imaging (MRI) has achieved high spatial resolution with excellent tissue discrimination but is more susceptible to limited ability to monitor the hemoglobin dynamics. In the present work, the vascular status and the pathophysiological changes that occur during tumor vascularization are studied in an orthotopic brain tumor model. A noninvasive multimodal approach based on the NIRS technique, namely steady state diffuse optical spectroscopy (SSDOS) along with MRI, is applied for monitoring the concentrations of oxyhemoglobin, deoxyhemoglobin and water within tumor region. The concentrations of oxyhemoglobin, deoxyhemoglobin and water within tumor vasculature are extracted at 15 discrete wavelengths in a spectral window of 675-780 nm. We found a direct correlation between tumor size, intratumoral microvessel density and tumor oxygenation. The relative decrease in tumor oxygenation with growth indicates that though blood vessels infiltrate and proliferate the tumor region, a hypoxic trend is clearly present.

Quasi-CW diode-pumped self-starting adaptive laser with self-Q-switched output.

PubMed

Smith, G; Damzen, M J

2007-05-14

An investigation is made into a quasi-CW (QCW) diode-pumped holographic adaptive laser utilising an ultra high gain (approximately 10(4)) Nd:YVO(4) bounce amplifier. The laser produces pulses at 1064 nm with energy approximately 0.6 mJ, duration <3 ns and peak power approximately 200 kW, with high stability, via self-Q-switching effects due to the transient dynamics of the writing and replay of the gain hologram for each pump pulse. The system produces a near-diffraction-limited output with M(2)<1.3 and operates with a single longitudinal mode. In a further adaptive laser configuration, the output was amplified to obtain pulses of approximately 5.6 mJ energy, approximately 7 ns duration and approximately 1 MW peak power. The output spatial quality is also M(2)<1.3 with SLM operation. Up to 2.9 mJ pulse energy of frequency doubled green (532 nm) radiation is obtained, using an LBO crystal, representing approximately 61% conversion efficiency. This work shows that QCW diode-pumped self-adaptive holographic lasers can provide a useful source of high peak power, short duration pulses with excellent spatial quality and narrow linewidth spectrum.

Rapid assessment of nonlinear optical propagation effects in dielectrics

PubMed Central

Hoyo, J. del; de la Cruz, A. Ruiz; Grace, E.; Ferrer, A.; Siegel, J.; Pasquazi, A.; Assanto, G.; Solis, J.

2015-01-01

Ultrafast laser processing applications need fast approaches to assess the nonlinear propagation of the laser beam in order to predict the optimal range of processing parameters in a wide variety of cases. We develop here a method based on the simple monitoring of the nonlinear beam shaping against numerical prediction. The numerical code solves the nonlinear Schrödinger equation with nonlinear absorption under simplified conditions by employing a state-of-the art computationally efficient approach. By comparing with experimental results we can rapidly estimate the nonlinear refractive index and nonlinear absorption coefficients of the material. The validity of this approach has been tested in a variety of experiments where nonlinearities play a key role, like spatial soliton shaping or fs-laser waveguide writing. The approach provides excellent results for propagated power densities for which free carrier generation effects can be neglected. Above such a threshold, the peculiarities of the nonlinear propagation of elliptical beams enable acquiring an instantaneous picture of the deposition of energy inside the material realistic enough to estimate the effective nonlinear refractive index and nonlinear absorption coefficients that can be used for predicting the spatial distribution of energy deposition inside the material and controlling the beam in the writing process. PMID:25564243

Shock-Strength Determination With Seeded and Seedless Laser Methods

NASA Technical Reports Server (NTRS)

Herring, G. C.; Meyers, James F.

2008-01-01

Two nonintrusive laser diagnostics were independently used to demonstrate the measurement of time-averaged and spatially-resolved pressure change across a twodimensional (2-D) shock wave. The first method is Doppler global velocimetry (DGV) which uses water seeding and generates 2-D maps of 3-orthogonal components of velocity. A DGV-measured change in flow direction behind an oblique shock provides an indirect determination of pressure jump across the shock, when used with the known incoming Mach number and ideal shock relations (or Prandtl-Meyer flow equations for an expansion fan). This approach was demonstrated at Mach 2 on 2-D shocks and expansions generated from a flat plate at angles-of-attack approx. equals -2.4deg and +0.6deg, respectively. This technique also works for temperature jump (as well as pressure) and for normal shocks (as well as oblique). The second method, laser-induced thermal acoustics (LITA), is a seedless approach that was used to generate 1-D spatial profiles of streamwise Mach number, sound speed, pressure, and temperature across the same shock waves. Excellent agreement was obtained between the DGV and LITA methods, suggesting that either technique is viable for noninvasive shock-strength measurements.

Small animal optoacoustic tomography system for molecular imaging of contrast agents

NASA Astrophysics Data System (ADS)

Su, Richard; Liopo, Anton; Ermilov, Sergey A.; Oraevsky, Alexander A.

2016-03-01

We developed a new and improved Laser Optoacoustic Imaging System, LOIS-3D for preclinical research applications in small animal models. The advancements include (i) a new stabilized imaging module with a more homogeneous illumination of the mouse yielding a better spatial resolution (<0.2 mm) and (ii) a new low noise amplifier incorporated into the ultrasonic probe and providing the noise equivalent pressure around 2 Pa resulting in increased signal-to-noise ratio and the optical absorption sensitivity of about 0.15 cm-1. We also improved scan time and the image reconstruction times. This prototype has been commercialized for a number of biomedical research applications, such as imaging vascularization and measuring hemoglobin / oxyhemoglobin distribution in the organs as well as imaging exogenous or endogenous optoacoustic contrast agents. As examples, we present in vivo experiments using phantoms and mice with and without tumor injected with contrast agents with indocyanine green (ICG). LOIS-3D was capable of detecting ~1-2 pmole of the ICG, in tissues with relatively low blood content. With its high sensitivity and excellent spatial resolution LOIS-3D is an advanced alternative to fluorescence and bioluminescence based modalities for molecular imaging in live mice.

Four-Dimensional Ultrafast Electron Microscopy: Insights into an Emerging Technique.

PubMed

Adhikari, Aniruddha; Eliason, Jeffrey K; Sun, Jingya; Bose, Riya; Flannigan, David J; Mohammed, Omar F

2017-01-11

Four-dimensional ultrafast electron microscopy (4D-UEM) is a novel analytical technique that aims to fulfill the long-held dream of researchers to investigate materials at extremely short spatial and temporal resolutions by integrating the excellent spatial resolution of electron microscopes with the temporal resolution of ultrafast femtosecond laser-based spectroscopy. The ingenious use of pulsed photoelectrons to probe surfaces and volumes of materials enables time-resolved snapshots of the dynamics to be captured in a way hitherto impossible by other conventional techniques. The flexibility of 4D-UEM lies in the fact that it can be used in both the scanning (S-UEM) and transmission (UEM) modes depending upon the type of electron microscope involved. While UEM can be employed to monitor elementary structural changes and phase transitions in samples using real-space mapping, diffraction, electron energy-loss spectroscopy, and tomography, S-UEM is well suited to map ultrafast dynamical events on materials surfaces in space and time. This review provides an overview of the unique features that distinguish these techniques and also illustrates the applications of both S-UEM and UEM to a multitude of problems relevant to materials science and chemistry.

A photometric function of planetary surfaces for gourmets

NASA Astrophysics Data System (ADS)

Shkuratov, Yuriy; Korokhin, Viktor; Shevchenko, Vasilij; Mikhalchenko, Olga; Belskaya, Irina; Kaydash, Vadym; Videen, Gorden; Zubko, Evgenij; Velikodsky, Yuriy

2018-03-01

A new photometric model with small number of parameters is presented. The model is based on an assumption that there exist such surfaces for which spatial brightness variations caused by small topography undulations can be reproduced exactly by corresponding spatial variations of albedo. This indistinguishability results in a differential equation suggesting a new photometric function that generalizes, in particular, the Akimov disk-function. Our model provides excellent fits in a wide phase-angle range for integral observations of asteroids of different albedos. We also carried out fitting to integral observations of the Moon and Mercury, confirming difficulties in describing Mercury's phase function at large phase angles, which were also found for the Hapke model. Comparisons of global latitude and longitude trends with our model calculations have shown good coincidence for the Moon. To retrieve the lunar trends, we use the phase-ratio technique, applying it to our telescope observations. Mapping the model parameters using LROC WAC data were carried out for a region comprising the Reiner Gamma formation. This mapping allows us to calculate phase-ratio images of the region, showing at large phase angles systematically steeper phase curves of young craters and smaller steepness for the very Reiner Gamma formation.

Rapid assessment of nonlinear optical propagation effects in dielectrics.

PubMed

del Hoyo, J; de la Cruz, A Ruiz; Grace, E; Ferrer, A; Siegel, J; Pasquazi, A; Assanto, G; Solis, J

2015-01-07

Ultrafast laser processing applications need fast approaches to assess the nonlinear propagation of the laser beam in order to predict the optimal range of processing parameters in a wide variety of cases. We develop here a method based on the simple monitoring of the nonlinear beam shaping against numerical prediction. The numerical code solves the nonlinear Schrödinger equation with nonlinear absorption under simplified conditions by employing a state-of-the art computationally efficient approach. By comparing with experimental results we can rapidly estimate the nonlinear refractive index and nonlinear absorption coefficients of the material. The validity of this approach has been tested in a variety of experiments where nonlinearities play a key role, like spatial soliton shaping or fs-laser waveguide writing. The approach provides excellent results for propagated power densities for which free carrier generation effects can be neglected. Above such a threshold, the peculiarities of the nonlinear propagation of elliptical beams enable acquiring an instantaneous picture of the deposition of energy inside the material realistic enough to estimate the effective nonlinear refractive index and nonlinear absorption coefficients that can be used for predicting the spatial distribution of energy deposition inside the material and controlling the beam in the writing process.

Rapid assessment of nonlinear optical propagation effects in dielectrics

NASA Astrophysics Data System (ADS)

Hoyo, J. Del; de La Cruz, A. Ruiz; Grace, E.; Ferrer, A.; Siegel, J.; Pasquazi, A.; Assanto, G.; Solis, J.

2015-01-01

Ultrafast laser processing applications need fast approaches to assess the nonlinear propagation of the laser beam in order to predict the optimal range of processing parameters in a wide variety of cases. We develop here a method based on the simple monitoring of the nonlinear beam shaping against numerical prediction. The numerical code solves the nonlinear Schrödinger equation with nonlinear absorption under simplified conditions by employing a state-of-the art computationally efficient approach. By comparing with experimental results we can rapidly estimate the nonlinear refractive index and nonlinear absorption coefficients of the material. The validity of this approach has been tested in a variety of experiments where nonlinearities play a key role, like spatial soliton shaping or fs-laser waveguide writing. The approach provides excellent results for propagated power densities for which free carrier generation effects can be neglected. Above such a threshold, the peculiarities of the nonlinear propagation of elliptical beams enable acquiring an instantaneous picture of the deposition of energy inside the material realistic enough to estimate the effective nonlinear refractive index and nonlinear absorption coefficients that can be used for predicting the spatial distribution of energy deposition inside the material and controlling the beam in the writing process.

Large Area Coverage of a TPC Endcap with GridPix Detectors

NASA Astrophysics Data System (ADS)

Kaminski, Jochen

2018-02-01

The Large Prototype TPC at DESY, Hamburg, was built by the LCTPC collaboration as a testbed for new readout technologies of Time Projection Chambers. Up to seven modules of about 400 cm2 each can be placed in the endcap. Three of these modules were equipped with a total of 160 GridPix detectors. This is a combination of a highly pixelated readout ASIC and a Micromegas built on top. GridPix detectors have a very high efficiency of detecting primary electrons, which leads to excellent spatial and energy resolutions. For the first time a large number of GridPix detectors has been operated and long segments of tracks have been recorded with excellent precision.

Automated microdensitometer for digitizing astronomical plates

NASA Technical Reports Server (NTRS)

Angilello, J.; Chiang, W. H.; Elmegreen, D. M.; Segmueller, A.

1984-01-01

A precision microdensitometer was built under control of an IBM S/1 time-sharing computer system. The instrument's spatial resolution is better than 20 microns. A raster scan of an area of 10x10 sq mm (500x500 raster points) takes 255 minutes. The reproducibility is excellent and the stability is good over a period of 30 hours, which is significantly longer than the time required for most scans. The intrinsic accuracy of the instrument was tested using Kodak standard filters, and it was found to be better than 3%. A comparative accuracy was tested measuring astronomical plates of galaxies for which absolute photoelectric photometry data were available. The results showed an accuracy excellent for astronomical applications.

Brief Report: Eye Movements during Visual Search Tasks Indicate Enhanced Stimulus Discriminability in Subjects with PDD

ERIC Educational Resources Information Center

Kemner, Chantal; van Ewijk, Lizet; van Engeland, Herman; Hooge, Ignace

2008-01-01

Subjects with PDD excel on certain visuo-spatial tasks, amongst which visual search tasks, and this has been attributed to enhanced perceptual discrimination. However, an alternative explanation is that subjects with PDD show a different, more effective search strategy. The present study aimed to test both hypotheses, by measuring eye movements…

Potential applications of electron emission membranes in medicine

NASA Astrophysics Data System (ADS)

Bilevych, Yevgen; Brunner, Stefan E.; Chan, Hong Wah; Charbon, Edoardo; van der Graaf, Harry; Hagen, Cornelis W.; Nützel, Gert; Pinto, Serge D.; Prodanović, Violeta; Rotman, Daan; Santagata, Fabio; Sarro, Lina; Schaart, Dennis R.; Sinsheimer, John; Smedley, John; Tao, Shuxia; Theulings, Anne M. M. G.

2016-02-01

With a miniaturised stack of transmission dynodes, a noise free amplifier is being developed for the detection of single free electrons, with excellent time- and 2D spatial resolution and efficiency. With this generic technology, a new family of detectors for individual elementary particles may become possible. Potential applications of such electron emission membranes in medicine are discussed.

Centre of Excellence For Simulation Education and Innovation (CESEI).

PubMed

Qayumi, A Karim

2010-01-01

Simulation is becoming an integral part of medical education. The American College of Surgeons (ACS) was the first organization to recognize the value of simulation-based learning, and to award accreditation for educational institutions that aim to provide simulation as part of the experiential learning opportunity. Centre of Excellence for Simulation Education and Innovation (CESEI) is a multidisciplinary and interprofessional educational facility that is based at the University of British Columbia (UBC) and Vancouver Costal Health Authority (VCH). Centre of Excellence for Simulation Education and Innovation's goal is to provide excellence in education, research, and healthcare delivery by providing a technologically advanced environment and learning opportunity using simulation for various groups of learners including undergraduate, postgraduate, nursing, and allied health professionals. This article is an attempt to describe the infrastructure, services, and uniqueness of the Centre of Excellence for Simulation Education and Innovation. Copyright 2010 Association of Program Directors in Surgery. Published by Elsevier Inc. All rights reserved.

A Unified Model for GRB Prompt Emission from Optical to Gamma-Rays; Exploring GRBs as Standard Candles

NASA Technical Reports Server (NTRS)

Guiriec, S.; Kouveliotou, C.; Hartmann, D. H.; Granot, J.; Asano, K.; Meszaros, P.; Gill, R.; Gehrels, N.; McEnery, J.

2016-01-01

The origin of prompt emission from gamma-ray bursts (GRBs) remains to be an open question. Correlated prompt optical and gamma-ray emission observed in a handful of GRBs strongly suggests a common emission region, but failure to adequately fit the broadband GRB spectrum prompted the hypothesis of different emission mechanisms for the low- and high-energy radiations. We demonstrate that our multi-component model for GRB -ray prompt emission provides an excellent fit to GRB 110205A from optical to gamma-ray energies. Our results show that the optical and highest gamma-ray emissions have the same spatial and spectral origin, which is different from the bulk of the X- and softest gamma-ray radiation. Finally, our accurate redshift estimate for GRB 110205A demonstrates promise for using GRBs as cosmological standard candles.

Sea Surface Salinity Variability from Simulations and Observations: Preparing for Aquarius

NASA Technical Reports Server (NTRS)

Jacob, S. Daniel; LeVine, David M.

2010-01-01

Oceanic fresh water transport has been shown to play an important role in the global hydrological cycle. Sea surface salinity (SSS) is representative of the surface fresh water fluxes and the upcoming Aquarius mission scheduled to be launched in December 2010 will provide excellent spatial and temporal SSS coverage to better estimate the net exchange. In most ocean general circulation models, SSS is relaxed to climatology to prevent model drift. While SST remains a well observed variable, relaxing to SST reduces the range of SSS variability in the simulations (Fig.1). The main objective of the present study is to simulate surface tracers using a primitive equation ocean model for multiple forcing data sets to identify and establish a baseline SSS variability. The simulated variability scales are compared to those from near-surface argo salinity measurements.

Anticipated and zero-lag synchronization in motifs of delay-coupled systems

NASA Astrophysics Data System (ADS)

Mirasso, Claudio R.; Carelli, Pedro V.; Pereira, Tiago; Matias, Fernanda S.; Copelli, Mauro

2017-11-01

Anticipated and zero-lag synchronization have been observed in different scientific fields. In the brain, they might play a fundamental role in information processing, temporal coding and spatial attention. Recent numerical work on anticipated and zero-lag synchronization studied the role of delays. However, an analytical understanding of the conditions for these phenomena remains elusive. In this paper, we study both phenomena in systems with small delays. By performing a phase reduction and studying phase locked solutions, we uncover the functional relation between the delay, excitation and inhibition for the onset of anticipated synchronization in a sender-receiver-interneuron motif. In the case of zero-lag synchronization in a chain motif, we determine the stability conditions. These analytical solutions provide an excellent prediction of the phase-locked regimes of Hodgkin-Huxley models and Roessler oscillators.

Progress on CBET Platform at the Nike Laser

NASA Astrophysics Data System (ADS)

Weaver, J. L.; McKenty, P.; Oh, J.; Kehne, D.; Schmitt, A. J.; Obenschain, S.; Serlin, V.; Lehmberg, R.; Tsung, F.

2015-11-01

Cross-beam energy transport (CBET) studies are underway at the Nike krypton-fluoride (KrF) laser at NRL. This facility has unique characteristics that provide an excellent platform for CBET work - including short wavelength (248 nm), large bandwidth (1-3 THz), beam smoothing by induced spatial incoherence (ISI), and full aperture focal spot zooming. Nike's two beam arrays are widely separated (135° in azimuth) which facilitates CBET studies in a nearly opposing geometry, relevant to Polar Direct Drive implosions. Various target types are planned: planar slabs, cylindrical and spherical shells, and low-density targets. The solid targets will be used to examine gradient geometries and the latter will access larger volume, more uniform plasmas. The initial campaign is exploring changes observed by scattered light diagnostics for both beam arrays as the probe laser spectrum is modified. Work supported by DoE/NNSA.

Combined photoacoustic and magneto-acoustic imaging.

PubMed

Qu, Min; Mallidi, Srivalleesha; Mehrmohammadi, Mohammad; Ma, Li Leo; Johnston, Keith P; Sokolov, Konstantin; Emelianov, Stanislav

2009-01-01

Ultrasound is a widely used modality with excellent spatial resolution, low cost, portability, reliability and safety. In clinical practice and in the biomedical field, molecular ultrasound-based imaging techniques are desired to visualize tissue pathologies, such as cancer. In this paper, we present an advanced imaging technique - combined photoacoustic and magneto-acoustic imaging - capable of visualizing the anatomical, functional and biomechanical properties of tissues or organs. The experiments to test the combined imaging technique were performed using dual, nanoparticle-based contrast agents that exhibit the desired optical and magnetic properties. The results of our study demonstrate the feasibility of the combined photoacoustic and magneto-acoustic imaging that takes the advantages of each imaging techniques and provides high sensitivity, reliable contrast and good penetrating depth. Therefore, the developed imaging technique can be used in wide range of biomedical and clinical application.

Macroscopic Entangled State Generation with Optomechanical Coupling of Two Mechanical Modes

NASA Astrophysics Data System (ADS)

Weaver, Matthew; Luna, Fernando; Buters, Frank; Heeck, Kier; de Man, Sven; Bouwmeester, Dirk

Mechanical resonators with a large quantum position uncertainty are an excellent test system for proposed decoherence mechanisms in massive systems. We present a scheme to optomechanically entangle two mechanical resonators with large frequency separation via two tone driving and single photon projection measurements. The quantum position uncertainty can be tuned with a variable optical pulse displacement operation, and independent single photon readout of the two resonators provides robust verification of the quantum states of the system. This scheme is currently experimentally feasible in a number of high mass opto- and electro-mechanical systems. We demonstrate one such system with two spatially and frequency separated Si3N4 trampoline resonators. We also show how the resonators can be coupled with two tone driving and the single photon optomechanical coupling rates can be tuned.

Monte Carlo modeling of spatial coherence: free-space diffraction

PubMed Central

Fischer, David G.; Prahl, Scott A.; Duncan, Donald D.

2008-01-01

We present a Monte Carlo method for propagating partially coherent fields through complex deterministic optical systems. A Gaussian copula is used to synthesize a random source with an arbitrary spatial coherence function. Physical optics and Monte Carlo predictions of the first- and second-order statistics of the field are shown for coherent and partially coherent sources for free-space propagation, imaging using a binary Fresnel zone plate, and propagation through a limiting aperture. Excellent agreement between the physical optics and Monte Carlo predictions is demonstrated in all cases. Convergence criteria are presented for judging the quality of the Monte Carlo predictions. PMID:18830335

Statistical analysis of atmospheric turbulence about a simulated block building

NASA Technical Reports Server (NTRS)

Steely, S. L., Jr.

1981-01-01

An array of towers instrumented to measure the three components of wind speed was used to study atmospheric flow about a simulated block building. Two-point spacetime correlations of the longitudinal velocity component were computed along with two-point spatial correlations. These correlations are in good agreement with fundamental concepts of fluid mechanics. The two-point spatial correlations computed directly were compared with correlations predicted by Taylor's hypothesis and excellent agreement was obtained at the higher levels which were out of the building influence. The correlations fall off significantly in the building wake but recover beyond the wake to essentially the same values in the undisturbed, higher regions.

Pd-Metalated Conjugated Nanoporous Polycarbazoles for Additive-Free Cyanation of Aryl Halides: Boosting Catalytic Efficiency through Spatial Modulation

DOE PAGES

Ding, Shunmin; Tian, Chengcheng; Zhu, Xiang; ...

2017-03-23

Transition-metal-catalyzed cyanation of aryl halides is a common route to benzonitriles, which are integral to many industrial procedures. However, traditional homogeneous catalysts for such processes are expensive and suffer poor recyclability, so a heterogeneous analogue is highly desired. A novel spatial modulation approach has been developed in this paper to fabricate a heterogeneous Pd-metalated nanoporous polymer, which catalyzes the cyanation of aryl halides without need for ligands. Finally, the catalyst displays high activity in the synthesis of benzonitriles, including high product yields, excellent stability and recycling, and broad functional-group tolerance.

Incorporation of a spatial source distribution and a spatial sensor sensitivity in a laser ultrasound propagation model using a streamlined Huygens' principle.

PubMed

Laloš, Jernej; Babnik, Aleš; Možina, Janez; Požar, Tomaž

2016-03-01

The near-field, surface-displacement waveforms in plates are modeled using interwoven concepts of Green's function formalism and streamlined Huygens' principle. Green's functions resemble the building blocks of the sought displacement waveform, superimposed and weighted according to the simplified distribution. The approach incorporates an arbitrary circular spatial source distribution and an arbitrary circular spatial sensitivity in the area probed by the sensor. The displacement histories for uniform, Gaussian and annular normal-force source distributions and the uniform spatial sensor sensitivity are calculated, and the corresponding weight distributions are compared. To demonstrate the applicability of the developed scheme, measurements of laser ultrasound induced solely by the radiation pressure are compared with the calculated waveforms. The ultrasound is induced by laser pulse reflection from the mirror-surface of a glass plate. The measurements show excellent agreement not only with respect to various wave-arrivals but also in the shape of each arrival. Their shape depends on the beam profile of the excitation laser pulse and its corresponding spatial normal-force distribution. Copyright © 2015 Elsevier B.V. All rights reserved.

High-resolution matrix-assisted laser desorption ionization–imaging mass spectrometry of lipids in rodent optic nerve tissue

PubMed Central

Anderson, David M. G.; Mills, Daniel; Spraggins, Jeffrey; Lambert, Wendi S.; Calkins, David J.

2013-01-01

Purpose To develop a method for generating high spatial resolution (10 µm) matrix-assisted laser desorption ionization (MALDI) images of lipids in rodent optic nerve tissue. Methods Ice-embedded optic nerve tissue from rats and mice were cryosectioned across the coronal and sagittal axes of the nerve fiber. Sections were thaw mounted on gold-coated MALDI plates and were washed with ammonium acetate to remove biologic salts before being coated in 2,5-dihydroxybenzoic acid by sublimation. MALDI images were generated in positive and negative ion modes at 10 µm spatial resolution. Lipid identification was performed with a high mass resolution Fourier transform ion cyclotron resonance mass spectrometer. Results Several lipid species were observed with high signal intensity in MALDI images of optic nerve tissue. Several lipids were localized to specific structures including in the meninges surrounding the optic nerve and in the central neuronal tissue. Specifically, phosphatidylcholine species were observed throughout the nerve tissue in positive ion mode while sulfatide species were observed in high abundance in the meninges surrounding the optic nerve in negative ion mode. Accurate mass measurements and fragmentation using sustained off-resonance irradiation with a high mass resolution Fourier transform ion cyclotron resonance mass spectrometer instrument allowed for identification of lipid species present in the small structure of the optic nerve directly from tissue sections. Conclusions An optimized sample preparation method provides excellent sensitivity for lipid species present within optic nerve tissue. This allowed the laser spot size and fluence to be reduced to obtain a high spatial resolution of 10 µm. This new imaging modality can now be applied to determine spatial and molecular changes in optic nerve tissue with disease. PMID:23559852

SAPHIRE (scintillator avalanche photoconductor with high resolution emitter readout) for low dose x-ray imaging: Spatial resolution

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li Dan; Zhao Wei

2008-07-15

An indirect flat panel imager (FPI) with programmable avalanche gain and field emitter array (FEA) readout is being investigated for low-dose and high resolution x-ray imaging. It is made by optically coupling a structured x-ray scintillator, e.g., thallium (Tl) doped cesium iodide (CsI), to an amorphous selenium (a-Se) avalanche photoconductor called high-gain avalanche rushing amorphous photoconductor (HARP). The charge image created by the scintillator/HARP (SHARP) combination is read out by the electron beams emitted from the FEA. The proposed detector is called scintillator avalanche photoconductor with high resolution emitter readout (SAPHIRE). The programmable avalanche gain of HARP can improve themore » low dose performance of indirect FPI while the FEA can be made with pixel sizes down to 50 {mu}m. Because of the avalanche gain, a high resolution type of CsI (Tl), which has not been widely used in indirect FPI due to its lower light output, can be used to improve the high spatial frequency performance. The purpose of the present article is to investigate the factors affecting the spatial resolution of SAPHIRE. Since the resolution performance of the SHARP combination has been well studied, the focus of the present work is on the inherent resolution of the FEA readout method. The lateral spread of the electron beam emitted from a 50 {mu}mx50 {mu}m pixel FEA was investigated with two different electron-optical designs: mesh-electrode-only and electrostatic focusing. Our results showed that electrostatic focusing can limit the lateral spread of electron beams to within the pixel size of down to 50 {mu}m. Since electrostatic focusing is essentially independent of signal intensity, it will provide excellent spatial uniformity.« less

Changes in the extreme wave heights over the Baltic Sea

NASA Astrophysics Data System (ADS)

Kudryavtseva, Nadia; Soomere, Tarmo

2017-04-01

Storms over the Baltic Sea and northwestern Europe have a large impact on the population, offshore industry, and shipping. The understanding of extreme events in sea wave heights and their change due to the climate change and variability is critical for assessment of flooding risks and coastal protection. The BACCII Assessment of Climate Change for the Baltic Sea Basin showed that the extreme events analysis of wind waves is currently not very well addressed, as well as satellite observations of the wave heights. Here we discuss the analysis of all existing satellite altimetry data over the Baltic Sea Basin regarding extremes in the wave heights. In this talk for the first time, we present an analysis of 100-yr return periods, fitted generalized Pareto and Weibull distributions, number, and frequency of extreme events in wave heights in the Baltic Sea measured by the multi-mission satellite altimetry. The data span more than 23 years and provide an excellent spatial coverage over the Baltic Sea, allowing to study in details spatial variations and changes in extreme wave heights. The analysis is based on an application of the Initial Distribution Method, Annual Maxima method and Peak-Over-Threshold approach to satellite altimetry data, all validated in comparison with in-situ wave height measurements. Here we show that the 100-yr return periods of wave heights show significant spatial changes over the Baltic Sea indicating a decrease in the southern part of the Baltic Sea and an increase in adjacent areas, which can significantly affect coast vulnerability. Here we compare the observed shift with storm track database data and discuss a spatial correlation and possible connection between the changes in the storm tracks over the Baltic Sea and the change in the extreme wave heights.

HARDI denoising using nonlocal means on S2

NASA Astrophysics Data System (ADS)

Kuurstra, Alan; Dolui, Sudipto; Michailovich, Oleg

2012-02-01

Diffusion MRI (dMRI) is a unique imaging modality for in vivo delineation of the anatomical structure of white matter in the brain. In particular, high angular resolution diffusion imaging (HARDI) is a specific instance of dMRI which is known to excel in detection of multiple neural fibers within a single voxel. Unfortunately, the angular resolution of HARDI is known to be inversely proportional to SNR, which makes the problem of denoising of HARDI data be of particular practical importance. Since HARDI signals are effectively band-limited, denoising can be accomplished by means of linear filtering. However, the spatial dependency of diffusivity in brain tissue makes it impossible to find a single set of linear filter parameters which is optimal for all types of diffusion signals. Hence, adaptive filtering is required. In this paper, we propose a new type of non-local means (NLM) filtering which possesses the required adaptivity property. As opposed to similar methods in the field, however, the proposed NLM filtering is applied in the spherical domain of spatial orientations. Moreover, the filter uses an original definition of adaptive weights, which are designed to be invariant to both spatial rotations as well as to a particular sampling scheme in use. As well, we provide a detailed description of the proposed filtering procedure, its efficient implementation, as well as experimental results with synthetic data. We demonstrate that our filter has substantially better adaptivity as compared to a number of alternative methods.

Nano-Scale Spatial Assessment of Calcium Distribution in Coccolithophores Using Synchrotron-Based Nano-CT and STXM-NEXAFS

PubMed Central

Sun, Shiyong; Yao, Yanchen; Zou, Xiang; Fan, Shenglan; Zhou, Qing; Dai, Qunwei; Dong, Faqin; Liu, Mingxue; Nie, Xiaoqin; Tan, Daoyong; Li, Shuai

2014-01-01

Calcified coccolithophores generate calcium carbonate scales around their cell surface. In light of predicted climate change and the global carbon cycle, the biomineralization ability of coccoliths has received growing interest. However, the underlying biomineralization mechanism is not yet well understood; the lack of non-invasive characterizing tools to obtain molecular level information involving biogenic processes and biomineral components remain significant challenges. In the present study, synchrotron-based Nano-computed Tomography (Nano-CT) and Scanning Transmission X-ray Microscopy-Near-edge X-ray Absorption Fine Structure Spectromicroscopy (STXM-NEXAFS) techniques were employed to identify Ca spatial distribution and investigate the compositional chemistry and distinctive features of the association between biomacromolecules and mineral components of calcite present in coccoliths. The Nano-CT results show that the coccolith scale vesicle is similar as a continuous single channel. The mature coccoliths were intracellularly distributed and immediately ejected and located at the exterior surface to form a coccoshpere. The NEXAFS spectromicroscopy results of the Ca L edge clearly demonstrate the existence of two levels of gradients spatially, indicating two distinctive forms of Ca in coccoliths: a crystalline-poor layer surrounded by a relatively crystalline-rich layer. The results show that Sr is absorbed by the coccoliths and that Sr/Ca substitution is rather homogeneous within the coccoliths. Our findings indicate that synchrotron-based STXM-NEXAFS and Nano-CT are excellent tools for the study of biominerals and provide information to clarify biomineralization mechanism. PMID:25530614

The BEVPS: A new test battery to assess visual perceptual and spatial processing abilities in 5-14 year-old children.

PubMed

Schmetz, Emilie; Rousselle, Laurence; Ballaz, Cécile; Detraux, Jean-Jacques; Barisnikov, Koviljka

2017-06-20

This study aims to examine the different levels of visual perceptual object recognition (early, intermediate, and late) defined in Humphreys and Riddoch's model as well as basic visual spatial processing in children using a new test battery (BEVPS). It focuses on the age sensitivity, internal coherence, theoretical validity, and convergent validity of this battery. French-speaking, typically developing children (n = 179; 5 to 14 years) were assessed using 15 new computerized subtests. After selecting the most age-sensitive tasks though ceiling effect and correlation analyses, an exploratory factorial analysis was run with the 12 remaining subtests to examine the BEVPS' theoretical validity. Three separate factors were identified for the assessment of the stimuli's basic features (F1, four subtests), view-dependent and -independent object representations (F2, six subtests), and basic visual spatial processing (F3, two subtests). Convergent validity analyses revealed positive correlations between F1 and F2 and the Beery-VMI visual perception subtest, while no such correlations were found for F3. Children's performances progressed until the age of 9-10 years in F1 and in view-independent representations (F2), and until 11-12 years in view-dependent representations (F2). However, no progression with age was observed in F3. Moreover, the selected subtests, present good-to-excellent internal consistency, which indicates that they provide reliable measures for the assessment of visual perceptual processing abilities in children.

Enhancing Teaching using MATLAB Add-Ins for Excel

ERIC Educational Resources Information Center

Hamilton, Paul V.

2004-01-01

In this paper I will illustrate how to extend the capabilities of Microsoft Excel spreadsheets with add-ins created by MATLAB. Excel provides a broad array of fundamental tools but often comes up short when more sophisticated scenarios are involved. To overcome this short-coming of Excel while retaining its ease of use, I will describe how…

Depth-time interpolation of feature trends extracted from mobile microelectrode data with kernel functions.

PubMed

Wong, Stephen; Hargreaves, Eric L; Baltuch, Gordon H; Jaggi, Jurg L; Danish, Shabbar F

2012-01-01

Microelectrode recording (MER) is necessary for precision localization of target structures such as the subthalamic nucleus during deep brain stimulation (DBS) surgery. Attempts to automate this process have produced quantitative temporal trends (feature activity vs. time) extracted from mobile MER data. Our goal was to evaluate computational methods of generating spatial profiles (feature activity vs. depth) from temporal trends that would decouple automated MER localization from the clinical procedure and enhance functional localization in DBS surgery. We evaluated two methods of interpolation (standard vs. kernel) that generated spatial profiles from temporal trends. We compared interpolated spatial profiles to true spatial profiles that were calculated with depth windows, using correlation coefficient analysis. Excellent approximation of true spatial profiles is achieved by interpolation. Kernel-interpolated spatial profiles produced superior correlation coefficient values at optimal kernel widths (r = 0.932-0.940) compared to standard interpolation (r = 0.891). The choice of kernel function and kernel width resulted in trade-offs in smoothing and resolution. Interpolation of feature activity to create spatial profiles from temporal trends is accurate and can standardize and facilitate MER functional localization of subcortical structures. The methods are computationally efficient, enhancing localization without imposing additional constraints on the MER clinical procedure during DBS surgery. Copyright © 2012 S. Karger AG, Basel.

Satellite Snow-Cover Mapping: A Brief Review

NASA Technical Reports Server (NTRS)

Hall, Dorothy K.

1995-01-01

Satellite snow mapping has been accomplished since 1966, initially using data from the reflective part of the electromagnetic spectrum, and now also employing data from the microwave part of the spectrum. Visible and near-infrared sensors can provide excellent spatial resolution from space enabling detailed snow mapping. When digital elevation models are also used, snow mapping can provide realistic measurements of snow extent even in mountainous areas. Passive-microwave satellite data permit global snow cover to be mapped on a near-daily basis and estimates of snow depth to be made, but with relatively poor spatial resolution (approximately 25 km). Dense forest cover limits both techniques and optical remote sensing is limited further by cloudcover conditions. Satellite remote sensing of snow cover with imaging radars is still in the early stages of research, but shows promise at least for mapping wet or melting snow using C-band (5.3 GHz) synthetic aperture radar (SAR) data. Observing System (EOS) Moderate Resolution Imaging Spectroradiometer (MODIS) data beginning with the launch of the first EOS platform in 1998. Digital maps will be produced that will provide daily, and maximum weekly global snow, sea ice and lake ice cover at 1-km spatial resolution. Statistics will be generated on the extent and persistence of snow or ice cover in each pixel for each weekly map, cloudcover permitting. It will also be possible to generate snow- and ice-cover maps using MODIS data at 250- and 500-m resolution, and to study and map snow and ice characteristics such as albedo. been under development. Passive-microwave data offer the potential for determining not only snow cover, but snow water equivalent, depth and wetness under all sky conditions. A number of algorithms have been developed to utilize passive-microwave brightness temperatures to provide information on snow cover and water equivalent. The variability of vegetative Algorithms are being developed to map global snow and ice cover using Earth Algorithms to map global snow cover using passive-microwave data have also cover and of snow grain size, globally, limits the utility of a single algorithm to map global snow cover.

An evaluation of the potential of Sentinel 1 for improving flash flood predictions via soil moisture-data assimilation

NASA Astrophysics Data System (ADS)

Cenci, Luca; Pulvirenti, Luca; Boni, Giorgio; Chini, Marco; Matgen, Patrick; Gabellani, Simone; Squicciarino, Giuseppe; Pierdicca, Nazzareno

2017-11-01

The assimilation of satellite-derived soil moisture estimates (soil moisture-data assimilation, SM-DA) into hydrological models has the potential to reduce the uncertainty of streamflow simulations. The improved capacity to monitor the closeness to saturation of small catchments, such as those characterizing the Mediterranean region, can be exploited to enhance flash flood predictions. When compared to other microwave sensors that have been exploited for SM-DA in recent years (e.g. the Advanced SCATterometer - ASCAT), characterized by low spatial/high temporal resolution, the Sentinel 1 (S1) mission provides an excellent opportunity to monitor systematically soil moisture (SM) at high spatial resolution and moderate temporal resolution. The aim of this research was thus to evaluate the impact of S1-based SM-DA for enhancing flash flood predictions of a hydrological model (Continuum) that is currently exploited for civil protection applications in Italy. The analysis was carried out in a representative Mediterranean catchment prone to flash floods, located in north-western Italy, during the time period October 2014-February 2015. It provided some important findings: (i) revealing the potential provided by S1-based SM-DA for improving discharge predictions, especially for higher flows; (ii) suggesting a more appropriate pre-processing technique to be applied to S1 data before the assimilation; and (iii) highlighting that even though high spatial resolution does provide an important contribution in a SM-DA system, the temporal resolution has the most crucial role. S1-derived SM maps are still a relatively new product and, to our knowledge, this is the first work published in an international journal dealing with their assimilation within a hydrological model to improve continuous streamflow simulations and flash flood predictions. Even though the reported results were obtained by analysing a relatively short time period, and thus should be supported by further research activities, we believe this research is timely in order to enhance our understanding of the potential contribution of the S1 data within the SM-DA framework for flash flood risk mitigation.

Vertical variations of coral reef drag forces

NASA Astrophysics Data System (ADS)

Asher, Shai; Niewerth, Stephan; Koll, Katinka; Shavit, Uri; LWI Collaboration; Technion Collaboration

2017-11-01

Corals rely on water flow for the supply of nutrients, particles and energy. Therefore, modeling of processes that take place inside the reef, such as respiration and photosynthesis, relies on models that describe the flow and concentration fields. Due to the high spatial heterogeneity of branched coral reefs, depth average models are usually applied. Such an average approach is insufficient when the flow spatial variation inside the reef is of interest. We report on measurements of vertical variations of drag force that are needed for developing 3D flow models. Coral skeletons were densely arranged along a laboratory flume. Two corals were CT-scanned and replaced with horizontally sliced 3D printed replicates. Drag profiles were measured by connecting the slices to costume drag sensors and velocity profiles were measured using a LDV. The measured drag of whole colonies was in excellent agreement with previous studies; however, these studies never showed how drag varies inside the reef. In addition, these distributions of drag force showed an excellent agreement with momentum balance calculations. Based on the results, we propose a new drag model that includes the dispersive stresses, and consequently displays reduced vertical variations of the drag coefficient.

Crop Surveillance Demonstration Using a Near-Daily MODIS Derived Vegetation Index Time Series

NASA Technical Reports Server (NTRS)

McKellip, Rodney; Ryan, Robert E.; Blonski, Slawomir; Prados, Don

2005-01-01

Effective response to crop disease outbreaks requires rapid identification and diagnosis of an event. A near-daily vegetation index product, such as a Normalized Difference Vegetation Index (NDVI), at moderate spatial resolution may serve as a good method for monitoring quick-acting diseases. NASA s Moderate Resolution Imaging Spectroradiometer (MODIS) instrument flown on the Terra and Aqua satellites has the temporal, spatial, and spectral properties to make it an excellent coarse-resolution data source for rapid, comprehensive surveillance of agricultural areas. A proof-of-concept wide area crop surveillance system using daily MODIS imagery was developed and tested on a set of San Joaquin cotton fields over a growing season. This area was chosen in part because excellent ground truth data were readily available. Preliminary results indicate that, at least in the southwestern part of the United States, near-daily NDVI products can be generated that show the natural variations in the crops as well as specific crop practices. Various filtering methods were evaluated and compared with standard MOD13 NDVI MODIS products. We observed that specific chemical applications that produce defoliation, which would have been missed using the standard 16-day product, were easily detectable with the filtered daily NDVI products.

One-Pot Solvothermal Synthesis of Bi4V2O11 as A New Solar Water Oxidation Photocatalyst

PubMed Central

Jiang, Zaiyong; Liu, Yuanyuan; Li, Mengmeng; Jing, Tao; Huang, Baibiao; Zhang, Xiaoyang; Qin, Xiaoyan; Dai, Ying

2016-01-01

Bi4V2O11 was prepared via a one-pot solvothermal method and characterized via XRD, Raman, XPS, Electrochemical impedance spectroscopy. The as-prepared Bi4V2O11 sample displays excellent photocatalytic activity towards oxygen evolution under light irradiation. The hierarchical structure is in favour of the spatial separation of photogenerated electrons and holes. Furthermore, the internal polar field also plays a role in improving the charge separation. Both of the two results are responsible for excellent activity of O2 evolution. The resulting hierarchical Bi4V2O11 sample should be very promising photocatalyst for the application of photocatalytic O2 evolution in the future. PMID:26947126

Improving Geoscience Students' Spatial Thinking Skills: Applying Cognitive Science Research in the Classroom

NASA Astrophysics Data System (ADS)

Ormand, C. J.; Shipley, T. F.; Manduca, C. A.; Tikoff, B.

2011-12-01

Spatial thinking skills are critical to success in many subdisciplines of the geosciences (and beyond). There are many components of spatial thinking, such as mental rotation, penetrative visualization, disembedding, perspective taking, and navigation. Undergraduate students in introductory and upper-level geoscience courses bring a wide variety of spatial skill levels to the classroom, as measured by psychometric tests of many of these components of spatial thinking. Furthermore, it is not unusual for individual students to excel in some of these areas while struggling in others. Although pre- and post-test comparisons show that student skill levels typically improve over the course of an academic term, average gains are quite modest. This suggests that it may be valuable to develop interventions to help undergraduate students develop a range of spatial skills that can be used to solve geoscience problems. Cognitive science research suggests a number of strong strategies for building students' spatial skills. Practice is essential, and time on task is correlated to improvement. Progressive alignment may be used to scaffold students' successes on simpler problems, allowing them to see how more complex problems are related to those they can solve. Gesturing has proven effective in moving younger students from incorrect problem-solving strategies to correct strategies in other disciplines. These principles can be used to design instructional materials to improve undergraduate geoscience students' spatial skills; we will present some examples of such materials.

ExcelAutomat: a tool for systematic processing of files as applied to quantum chemical calculations

NASA Astrophysics Data System (ADS)

Laloo, Jalal Z. A.; Laloo, Nassirah; Rhyman, Lydia; Ramasami, Ponnadurai

2017-07-01

The processing of the input and output files of quantum chemical calculations often necessitates a spreadsheet as a key component of the workflow. Spreadsheet packages with a built-in programming language editor can automate the steps involved and thus provide a direct link between processing files and the spreadsheet. This helps to reduce user-interventions as well as the need to switch between different programs to carry out each step. The ExcelAutomat tool is the implementation of this method in Microsoft Excel (MS Excel) using the default Visual Basic for Application (VBA) programming language. The code in ExcelAutomat was adapted to work with the platform-independent open-source LibreOffice Calc, which also supports VBA. ExcelAutomat provides an interface through the spreadsheet to automate repetitive tasks such as merging input files, splitting, parsing and compiling data from output files, and generation of unique filenames. Selected extracted parameters can be retrieved as variables which can be included in custom codes for a tailored approach. ExcelAutomat works with Gaussian files and is adapted for use with other computational packages including the non-commercial GAMESS. ExcelAutomat is available as a downloadable MS Excel workbook or as a LibreOffice workbook.

ExcelAutomat: a tool for systematic processing of files as applied to quantum chemical calculations.

PubMed

Laloo, Jalal Z A; Laloo, Nassirah; Rhyman, Lydia; Ramasami, Ponnadurai

2017-07-01

The processing of the input and output files of quantum chemical calculations often necessitates a spreadsheet as a key component of the workflow. Spreadsheet packages with a built-in programming language editor can automate the steps involved and thus provide a direct link between processing files and the spreadsheet. This helps to reduce user-interventions as well as the need to switch between different programs to carry out each step. The ExcelAutomat tool is the implementation of this method in Microsoft Excel (MS Excel) using the default Visual Basic for Application (VBA) programming language. The code in ExcelAutomat was adapted to work with the platform-independent open-source LibreOffice Calc, which also supports VBA. ExcelAutomat provides an interface through the spreadsheet to automate repetitive tasks such as merging input files, splitting, parsing and compiling data from output files, and generation of unique filenames. Selected extracted parameters can be retrieved as variables which can be included in custom codes for a tailored approach. ExcelAutomat works with Gaussian files and is adapted for use with other computational packages including the non-commercial GAMESS. ExcelAutomat is available as a downloadable MS Excel workbook or as a LibreOffice workbook.

Storm Surge Measurement with an Airborne Scanning Radar Altimeter

NASA Technical Reports Server (NTRS)

Wright, C. W.; Walsh, E. J.; Krabill, W. B.; Shaffer, W. A.; Baig, S. R.; Peng, M.; Pietrafesa, L. J.; Garcia, A. W.; Marks, F. D., Jr.; Black, P. G.;

A generalized LSTM-like training algorithm for second-order recurrent neural networks

PubMed Central

Monner, Derek; Reggia, James A.

2011-01-01

The Long Short Term Memory (LSTM) is a second-order recurrent neural network architecture that excels at storing sequential short-term memories and retrieving them many time-steps later. LSTM’s original training algorithm provides the important properties of spatial and temporal locality, which are missing from other training approaches, at the cost of limiting it’s applicability to a small set of network architectures. Here we introduce the Generalized Long Short-Term Memory (LSTM-g) training algorithm, which provides LSTM-like locality while being applicable without modification to a much wider range of second-order network architectures. With LSTM-g, all units have an identical set of operating instructions for both activation and learning, subject only to the configuration of their local environment in the network; this is in contrast to the original LSTM training algorithm, where each type of unit has its own activation and training instructions. When applied to LSTM architectures with peephole connections, LSTM-g takes advantage of an additional source of back-propagated error which can enable better performance than the original algorithm. Enabled by the broad architectural applicability of LSTM-g, we demonstrate that training recurrent networks engineered for specific tasks can produce better results than single-layer networks. We conclude that LSTM-g has the potential to both improve the performance and broaden the applicability of spatially and temporally local gradient-based training algorithms for recurrent neural networks. PMID:21803542

Integrating ecology, psychology and neurobiology within a food-hoarding paradigm

PubMed Central

Pravosudov, Vladimir V.; Smulders, Tom V.

2010-01-01

Many animals regularly hoard food for future use, which appears to be an important adaptation to a seasonally and/or unpredictably changing environment. This food-hoarding paradigm is an excellent example of a natural system that has broadly influenced both theoretical and empirical work in the field of biology. The food-hoarding paradigm has played a major role in the conceptual framework of numerous fields from ecology (e.g. plant–animal interactions) and evolution (e.g. the coevolution of caching, spatial memory and the hippocampus) to psychology (e.g. memory and cognition) and neurobiology (e.g. neurogenesis and the neurobiology of learning and memory). Many food-hoarding animals retrieve caches by using spatial memory. This memory-based behavioural system has the inherent advantage of being tractable for study in both the field and laboratory and has been shaped by natural selection, which produces variation with strong fitness consequences in a variety of taxa. Thus, food hoarding is an excellent model for a highly integrative approach to understanding numerous questions across a variety of disciplines. Recently, there has been a surge of interest in the complexity of animal cognition such as future planning and episodic-like-memory as well as in the relationship between memory, the environment and the brain. In addition, new breakthroughs in neurobiology have enhanced our ability to address the mechanisms underlying these behaviours. Consequently, the field is necessarily becoming more integrative by assessing behavioural questions in the context of natural ecological systems and by addressing mechanisms through neurobiology and psychology, but, importantly, within an evolutionary and ecological framework. In this issue, we aim to bring together a series of papers providing a modern synthesis of ecology, psychology, physiology and neurobiology and identifying new directions and developments in the use of food-hoarding animals as a model system. PMID:20156812

Proceedings of the Conferences on Excellence. Regents Advisory Committee on Graduate Study Conference on Excellence (Salt Fork State Park, Ohio, November 3-4, 1983) and Conference on Selective Excellence (Salt Fork State Park, Ohio, November 1-2, 1984).

ERIC Educational Resources Information Center

Ohio Board of Regents, Columbus.

The conferences reported in this document represent two phases of a process that has resulted in an array of programs to strengthen publicly assisted higher education in the state of Ohio. The following conference papers are provided: "A State Perspective on Excellence (and What Is Excellence?)" (Paul J. Olscamp); "The Role of the…

National Electrical Manufacturers Association NU-4 performance evaluation of the PET component of the NanoPET/CT preclinical PET/CT scanner.

PubMed

Szanda, Istvan; Mackewn, Jane; Patay, Gergely; Major, Peter; Sunassee, Kavitha; Mullen, Gregory E; Nemeth, Gabor; Haemisch, York; Blower, Philip J; Marsden, Paul K

2011-11-01

The NanoPET/CT represents the latest generation of commercial preclinical PET/CT systems. This article presents a performance evaluation of the PET component of the system according to the National Electrical Manufacturers Association (NEMA) NU-4 2008 standard. The NanoPET/CT consists of 12 lutetium yttrium orthosilicate:cerium modular detectors forming 1 ring, with 9.5-cm axial coverage and a 16-cm animal port. Each detector crystal is 1.12 × 1.12 × 13 mm, and 1 module contains 81 × 39 of these crystals. An optical light guide transmits the scintillation light to the flat-panel multianode position-sensitive photomultiplier tubes. Analog-to-digital converter cards and a field-programmable gate array-based data-collecting card provide the readout. Spatial resolution, sensitivity, counting rate capabilities, and image quality were evaluated in accordance with the NEMA NU-4 standard. Energy and temporal resolution measurements and a mouse imaging study were performed in addition to the standard. Energy resolution was 19% at 511 keV. The spatial resolution, measured as full width at half maximum on single-slice rebinning/filtered backprojection-reconstructed images, approached 1 mm on the axis and remained below 2.5 mm in the central 5-cm transaxial region both in the axial center and at one-quarter field of view. The maximum absolute sensitivity for a point source at the center of the field of view was 7.7%. The maximum noise equivalent counting rates were 430 kcps at 36 MBq and 130 kcps at 27 MBq for the mouse- and rat-sized phantoms, respectively. The uniformity and recovery coefficients were measured with the image-quality phantom, giving good-quality images. In a mouse study with an (18)F-labeled thyroid-specific tracer, the 2 lobes of the thyroid were clearly distinguishable, despite the small size of this organ. The flexible readout system allowed experiments to be performed in an efficient manner, and the system remained stable throughout. The large number of detector crystals, arranged with a fine pitch, results in excellent spatial resolution, which is the best reported for currently available commercial systems. The absolute sensitivity is high over the field of view. Combined with the excellent image quality, these features make the NanoPET/CT a powerful tool for preclinical research.

A Tutorial on the Use of Excel 2010 and Excel for Mac 2011 for Conducting Delay-Discounting Analyses

ERIC Educational Resources Information Center

Reed, Derek D.; Kaplan, Brent A.; Brewer, Adam T.

2012-01-01

In recent years, researchers and practitioners in the behavioral sciences have profited from a growing literature on delay discounting. The purpose of this article is to provide readers with a brief tutorial on how to use Microsoft Office Excel 2010 and Excel for Mac 2011 to analyze discounting data to yield parameters for both the hyperbolic…

Forest Canopy Heights in Amazon River Basin Forests as Estimated with the Geoscience Laser Altimeter System (GLAS)

Treesearch

E. H. Helmer; M. A. Lefsky

2006-01-01

Land-use change, mainly forest burning, harvest, or clearing for agriculture, may compose 15 to 40 percent of annual human-caused emissions of carbon (C) to the atmosphere. Spatially extensive data on forest C pools can validate and parameterize atmospheric and ecosystem models of those fluxes and quantify fluxes from forest change. Excellent evidence exists that light...

Natural Models for Autonomous Control of Spatial Navigation, Sensing, and Guidance

DTIC Science & Technology

2013-05-28

the opsins of deep-sea fishes , including their ability to withstand pressure, a significant study of how sensing proteins function in difficult...polarization sensing, we will gain insight concerning functional differences among materials which could have application for fabrication or design...have made excellent progress towards understanding how polarized-light receptors in animals function as well, including their function at the

Experimental demonstration of Klyshko's advanced-wave picture using a coincidence-count based, camera-enabled imaging system

NASA Astrophysics Data System (ADS)

Aspden, Reuben S.; Tasca, Daniel S.; Forbes, Andrew; Boyd, Robert W.; Padgett, Miles J.

2014-04-01

The Klyshko advanced-wave picture is a well-known tool useful in the conceptualisation of parametric down-conversion (SPDC) experiments. Despite being well-known and understood, there have been few experimental demonstrations illustrating its validity. Here, we present an experimental demonstration of this picture using a time-gated camera in an image-based coincidence measurement. We show an excellent agreement between the spatial distributions as predicted by the Klyshko picture and those obtained using the SPDC photon pairs. An interesting speckle feature is present in the Klyshko predictive images due to the spatial coherence of the back-propagated beam in the multi-mode fibre. This effect can be removed by mechanically twisting the fibre, thus degrading the spatial coherence of the beam and time-averaging the speckle pattern, giving an accurate correspondence between the predictive and SPDC images.

Generation of laser-induced periodic surface structures on transparent material-fused silica

NASA Astrophysics Data System (ADS)

Schwarz, Simon; Rung, Stefan; Hellmann, Ralf

2016-05-01

We report on a comparison between simulated and experimental results for the generation of laser-induced periodic surface structures with low spatial frequency on dielectrics. Using the established efficacy factor theory extended by a Drude model, we determine the required carrier density for the generation of low spatial frequency LIPSS (LSFL) and forecast their periodicity and orientation. In a subsequent calculative step, we determine the fluence of ultrashort laser pulses necessary to excite this required carrier density in due consideration of the pulse number dependent ablation threshold. The later calculation is based on a rate equation including photo- and avalanche ionization and derives appropriate process parameters for a selective generation of LSFL. Exemplarily, we apply this approach to the generation of LSFL on fused silica using a 1030 nm femtosecond laser. The experimental results for the orientation and spatial periodicity of LSFL reveal excellent agreement with the simulation.

Generation of laser-induced periodic surface structures on transparent material-fused silica

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schwarz, Simon; Rung, Stefan; Hellmann, Ralf

2016-05-02

We report on a comparison between simulated and experimental results for the generation of laser-induced periodic surface structures with low spatial frequency on dielectrics. Using the established efficacy factor theory extended by a Drude model, we determine the required carrier density for the generation of low spatial frequency LIPSS (LSFL) and forecast their periodicity and orientation. In a subsequent calculative step, we determine the fluence of ultrashort laser pulses necessary to excite this required carrier density in due consideration of the pulse number dependent ablation threshold. The later calculation is based on a rate equation including photo- and avalanche ionizationmore » and derives appropriate process parameters for a selective generation of LSFL. Exemplarily, we apply this approach to the generation of LSFL on fused silica using a 1030 nm femtosecond laser. The experimental results for the orientation and spatial periodicity of LSFL reveal excellent agreement with the simulation.« less

Hot and dense plasma probing by soft X-ray lasers

NASA Astrophysics Data System (ADS)

Krůs, M.; Kozlová, M.; Nejdl, J.; Rus, B.

2018-01-01

Soft X-ray lasers, due to their short wavelength, its brightness, and good spatial coherence, are excellent sources for the diagnostics of dense plasmas (up to 1025 cm-3) which are relevant to e.g. inertial fusion. Several techniques and experimental results, which are obtained at the quasi-steady state scheme being collisionally pumped 21.2 nm neon-like zinc laser installed at PALS Research Center, are presented here; among them the plasma density measurement by a double Lloyd mirror interferometer, deflectometer based on Talbot effect measuring plasma density gradients itself, with a following ray tracing postprocessing. Moreover, the high spatial resolution (nm scale) plasma images can be obtained when soft X-ray lasers are used.

Analytic solution of the Spencer-Lewis angular-spatial moments equations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Filippone, W.L.

A closed-form solution for the angular-spatial moments of the Spencer-Lewis equation is presented that is valid for infinite homogeneous media. From the moments, the electron density distribution as a function of position and path length (energy) is reconstructed for several sample problems involving plane isotropic sources of electrons in aluminium. The results are in excellent agreement with those determined numerically using the streaming ray method. The primary use of the closed form solution will most likely be to generate accurate electron transport benchmark solutions. In principle, the electron density as a function of space, path length, and direction can bemore » determined for planar sources of arbitrary angular distribution.« less

Recent Global Warming as Observed by AIRS and Depicted in GISSTEMP and MERRA-2

NASA Technical Reports Server (NTRS)

Susskind, Joel; Lee, Jae; Iredell, Lena

2017-01-01

AIRS Version-6 monthly mean level-3 surface temperature products confirm the result, depicted in the GISSTEMP dataset, that the earth's surface temperature has been warming since early 2015, though not before that. AIRS is at a higher spatial resolution than GISSTEMP, and produces sharper spatial features which are otherwise in excellent agreement with those of GISSTEMP. Version-6 AO Ts anomalies are consistent with those of Version-6 AIRS/AMSU. Version-7 AO anomalies should be even more accurate, especially at high latitudes. ARCs of MERRA-2 Ts anomalies are spurious as a result of a discontinuity which occurred somewhere between 2007 and 2008. This decreases global mean trends.

Local thermodynamic mapping for effective liquid density-functional theory

NASA Technical Reports Server (NTRS)

Kyrlidis, Agathagelos; Brown, Robert A.

1992-01-01

The structural-mapping approximation introduced by Lutsko and Baus (1990) in the generalized effective-liquid approximation is extended to include a local thermodynamic mapping based on a spatially dependent effective density for approximating the solid phase in terms of the uniform liquid. This latter approximation, called the local generalized effective-liquid approximation (LGELA) yields excellent predictions for the free energy of hard-sphere solids and for the conditions of coexistence of a hard-sphere fcc solid with a liquid. Moreover, the predicted free energy remains single valued for calculations with more loosely packed crystalline structures, such as the diamond lattice. The spatial dependence of the weighted density makes the LGELA useful in the study of inhomogeneous solids.

Thermal-to-visible transducer (TVT) for thermal-IR imaging

NASA Astrophysics Data System (ADS)

Flusberg, Allen; Swartz, Stephen; Huff, Michael; Gross, Steven

2008-04-01

We have been developing a novel thermal-to-visible transducer (TVT), an uncooled thermal-IR imager that is based on a Fabry-Perot Interferometer (FPI). The FPI-based IR imager can convert a thermal-IR image to a video electronic image. IR radiation that is emitted by an object in the scene is imaged onto an IR-absorbing material that is located within an FPI. Temperature variations generated by the spatial variations in the IR image intensity cause variations in optical thickness, modulating the reflectivity seen by a probe laser beam. The reflected probe is imaged onto a visible array, producing a visible image of the IR scene. This technology can provide low-cost IR cameras with excellent sensitivity, low power consumption, and the potential for self-registered fusion of thermal-IR and visible images. We will describe characteristics of requisite pixelated arrays that we have fabricated.

Local-order metric for condensed-phase environments

NASA Astrophysics Data System (ADS)

Martelli, Fausto; Ko, Hsin-Yu; Oǧuz, Erdal C.; Car, Roberto

2018-02-01

We introduce a local order metric (LOM) that measures the degree of order in the neighborhood of an atomic or molecular site in a condensed medium. The LOM maximizes the overlap between the spatial distribution of sites belonging to that neighborhood and the corresponding distribution in a suitable reference system. The LOM takes a value tending to zero for completely disordered environments and tending to one for environments that perfectly match the reference. The site-averaged LOM and its standard deviation define two scalar order parameters, S and δ S , that characterize with excellent resolution crystals, liquids, and amorphous materials. We show with molecular dynamics simulations that S , δ S , and the LOM provide very insightful information in the study of structural transformations, such as those occurring when ice spontaneously nucleates from supercooled water or when a supercooled water sample becomes amorphous upon progressive cooling.

Atomic force microscopy of adsorbed proteoglycan mimetic nanoparticles: Toward new glycocalyx-mimetic model surfaces.

PubMed

Hedayati, Mohammadhasan; Kipper, Matt J

2018-06-15

Blood vessels present a dense, non-uniform, polysaccharide-rich layer, called the endothelial glycocalyx. The polysaccharides in the glycocalyx include polyanionic glycosaminoglycans (GAGs). This polysaccharide-rich surface has excellent and unique blood compatibility. We report new methods for preparing and characterizing dense GAG surfaces that can serve as models of the vascular endothelial glycocalyx. The GAG-rich surfaces are prepared by adsorbing heparin or chondroitin sulfate-containing polyelectrolyte complex nanoparticles (PCNs) to chitosan-hyaluronan polyelectrolyte multilayers (PEMs). The surfaces are characterized by PeakForce tapping atomic force microscopy, both in air and in aqueous pH 7.4 buffer, and by PeakForce quantitative nanomechanics (PF-QNM) mode with high spatial resolution. These new surfaces provide access to heparin-rich or chondroitin sulfate-rich coatings that mimic both composition and nanoscale structural features of the vascular endothelial glycocalyx. Copyright © 2018. Published by Elsevier Ltd.

Developmental effects of the protein kinase inhibitor kenpaullone on the sea urchin embryo.

PubMed

Anello, Letizia; Cavalieri, Vincenzo; Di Bernardo, Maria

2018-01-01

The selection and validation of bioactive compounds require multiple approaches, including in-depth analyses of their biological activity in a whole-animal context. We exploited the sea urchin embryo in a rapid, medium-scale range screening to test the effects of the small synthetic kinase inhibitor kenpaullone. We show that sea urchin embryos specifically respond to this molecule depending on both dose and timing of administration. Phenotypic effects of kenpaullone are not immediately visible, since this molecule affects neither the fertilization nor the spatial arrangement of blastomeres at early developmental stages. Nevertheless, kenpaullone exposure from the beginning of embryogenesis profoundly perturbs specification, detachment from the epithelium, and migration of the primary mesenchyme cells, thus affecting the whole embryonic epithelial mesenchymal transition process. Our results reaffirm the sea urchin embryo as an excellent and sensitive in vivo system, which provides straightforward and rapid response to external stimuli. Copyright © 2017 Elsevier Inc. All rights reserved.

A Brief Account of Nanoparticle Contrast Agents for Photoacoustic Imaging

PubMed Central

Pan, Dipanjan; Kim, Benjamin; Wang, Lihong V.; Lanza, Gregory M

2014-01-01

Photoacoustic imaging (PAI) is a hybrid, nonionizing modality offering excellent spatial resolution, deep penetration, and high soft tissue contrast. In PAI, signal is generated based on the absorption of laser-generated optical energy by endogenous tissues or exogenous contrast agents leading to acoustic emissions detected by an ultrasound transducer. Research in this area over the years has shown that PAI has the ability to provide both physiological and molecular imaging, which can be viewed alone or used in a hybrid modality fashion to extend the anatomic and hemodynamic sensitivities of clinical ultrasound. PAI may be performed using inherent contrast afforded by light absorbing molecules such as hemoglobin, myoglobin, and melanin or exogenous small molecule contrast agent such as near infrared dyes and porphyrins. However, this review summarizes the potential of exogenous nanoparticle-based agents for PAI applications including contrast based on gold particles, carbon nanotubes, and encapsulated copper compounds. PMID:23983210

Pharmacokinetics of topically applied pilocarpine in the albino rabbit eye.

PubMed

Makoid, M C; Robinson, J R

1979-04-01

The temporal and spatial pattern of [3H]-pilocarpine nitrate distribution in the albino rabbit eye following topical administration was determined. A four-compartment caternary chain model describing this disposition corresponds to the precorneal area, the cornea, the aqueous humor, and the lens and vitreous. Simultaneous computer fitting of data from tissue corresponding to some compartments in the model supported the proposed model. Additional support was provided by the excellent correlation between predicted and observed values in multiple-dosing studies. Several important aspects of ocular drug disposition are evident from the model. The extensive parallel elimination at the absorption site gives rise to an apparent absorption rate constant that is one to two orders of magnitude larger than the true absorption rate constant. In addition, aqueous flow accounts for most of the drug removal. Thus, major effects on absorption and elimination, independent of the drug structure, suggest the possibility of similar pharmacokinetics for vastly different drugs.

Characterization of Nightside Mid-latitude Irregularities Observed with the Blackstone SuperDARN Radar

NASA Astrophysics Data System (ADS)

Ruohoniemi, J. M.; Ribeiro, A. J.; Baker, J. B.; Greenwald, R. A.; Newell, P. T.

2009-12-01

The new mid-latitude SuperDARN radars at Wallops Island and Blackstone observe strong coherent backscattering on an almost nightly basis from latitudes that appear to be subauroral. One study has demonstrated an excellent correlation with the occurrence of density and temperature gradients within the ionospheric projection of the plasmapause (Greenwald et al., Geophys. Res. Lett. [2006]). We have processed all the data collected with the Blackstone radar since its inception in February 2008 for a characterization of the occurrence and properties of ‘plasmapause’ scatter. We have determined the local time and Kp dependencies of the activity and the relation of the spatial distribution of the irregularities to magnetospheric boundaries and ionospheric density gradients. We establish that the irregularities are a feature of the quiet-time subauroral ionosphere and provide a valuable diagnostic of the electric fields in the inner magnetosphere.

Article title misstates the role of pavement sealers.

PubMed

O'Reilly, Kirk

2014-08-01

The claim made in the title of Witter et al. (2014) "Coal-tar-based sealcoated pavement: A major PAH source to urban stream sediments" is not supported by the data presented. The author's use of Pearson correlation coefficients is insufficient to indicate causation. The application of spatial analysis and principle component analysis did not include sealer specific inputs, so provides no basis for the claim. To test the hypothesis that sealers are a source of PAHs in the stream studied, EPA's Chemical Mass Balance (CMB) source evaluation model was applied to Witter's sediment data. CMB found an excellent fit (R(2) > 0.999) between measured and modeled PAH concentrations when sealers were not included as a potential source. This finding does not support Witter et al. (2014) claim that sealers are a major source of PAHs. Copyright © 2013 Elsevier Ltd. All rights reserved.

0.125 mm(3) spatial resolution steady-state MR angiography of the thighs with a blood pool contrast agent using the quadrature body coil only at 1.5 Tesla.

PubMed

Boschewitz, Jack M; Hadizadeh, Dariusch R; Kukuk, Guido M; Meyer, Carsten; Wilhelm, Kai; Koscielny, Arne; Verrel, Frauke; Gieseke, Jürgen; Schild, Hans H; Willinek, Winfried A

2014-10-01

To implement and evaluate high spatial resolution three-dimensional MR contrast-enhanced angiography (3D-CEMRA) of the thighs using a blood pool contrast agent (BPCA) using the quadrature body coil only in patients with peripheral arterial occlusive disease (PAOD) in cases receiver coils cannot be used at 1.5 Tesla (T). Nineteen patients (mean age: 68.7 ± 11.2 years; range, 38-83 years) with known PAOD (Fontaine stages; III: 16, IV: 3) prospectively underwent 3D-CEMRA at 1.5T with a noninterpolated voxel size of 0.49 × 0.49 × 0.48 mm(3) . Digital subtraction angiography (DSA) was available for comparison in all patients. Two readers independently evaluated movement artifacts, overall image quality of 3D-CEMRA, and grade of stenosis as compared to DSA. SNR and CNR levels were quantified. The 3D-CEMRA was successfully completed in all patients. Patient movement artifacts that affected stenosis grading occurred in 3/38 thighs. Overall image quality was rated excellent in 15/38, good in 12/38, and diagnostic in 8/38 thighs. Stenosis grading matched with that in DSA in 35/38 thighs. High SNR and CNR were measured in all vessels. The 0.125 mm(3) spatial resolution 3D-CEMRA of the thighs with a BPCA is feasible using a quadrature body coil exclusively with excellent image quality despite long acquisition times. J. Magn. Reson. Imaging 2014;40:996-1001. © 2014 Wiley Periodicals, Inc. © 2014 Wiley Periodicals, Inc.

1/f noise: diffusive systems and music

DOE Office of Scientific and Technical Information (OSTI.GOV)

Voss, R.F.

1975-11-01

Measurements of the 1/f voltage noise in continuous metal films are reported. At room temperature, samples of pure metals and bismuth (with a carrier density smaller by 10/sup 5/) of similar volume had comparable noise. The results suggest that the noise arises from equilibrium temperature fluctuations modulating the resistance. Spatial correlation of the noise implied that the fluctuations obey a diffusion equation. The empirical inclusion of an explicit 1/f region and appropriate normalization lead to excellent agreement with the measured noise. If the fluctuations are assumed to be spatially correlated, the diffusion equation can yield an extended 1/f region inmore » the power spectrum. The temperature response of a sample to delta and step function power inputs is shown to have the same shape as the autocorrelation function for uncorrelated and correlated temperature fluctuations, respectively. The spectrum obtained from the cosine transform of the measured step function response is in excellent agreement with the measured 1/f voltage noise spectrum. Spatially correlated equilibrium temperature fluctuations are not the dominant source of 1/f noise in semiconductors and metal films. However, the agreement between the low-frequency spectrum of fluctuations in the mean-square Johnson noise voltage and the resistance fluctuation spectrum measured in the presence of a current demonstrates that in these systems the 1/f noise is also due to equilibrium resistance fluctuations. Loudness fluctuations in music and speech and pitch fluctuations in music also show the 1/f behavior. 1/f noise sources, consequently, are demonstrated to be the natural choice for stochastic composition. 26 figures, 1 table. (auth)« less

Spatial properties of odd and even low order harmonics generated in gas.

PubMed

Lambert, G; Andreev, A; Gautier, J; Giannessi, L; Malka, V; Petralia, A; Sebban, S; Stremoukhov, S; Tissandier, F; Vodungbo, B; Zeitoun, Ph

2015-01-14

High harmonic generation in gases is developing rapidly as a soft X-ray femtosecond light-source for applications. This requires control over all the harmonics characteristics and in particular, spatial properties have to be kept very good. In previous literature, measurements have always included several harmonics contrary to applications, especially spectroscopic applications, which usually require a single harmonic. To fill this gap, we present here for the first time a detailed study of completely isolated harmonics. The contribution of the surrounding harmonics has been totally suppressed using interferential filtering which is available for low harmonic orders. In addition, this allows to clearly identify behaviors of standard odd orders from even orders obtained by frequency-mixing of a fundamental laser and of its second harmonic. Comparisons of the spatial intensity profiles, of the spatial coherence and of the wavefront aberration level of 5ω at 160 nm and 6ω at 135 nm have then been performed. We have established that the fundamental laser beam aberrations can cause the appearance of a non-homogenous donut-shape in the 6ω spatial intensity distribution. This undesirable effect can be easily controlled. We finally conclude that the spatial quality of an even harmonic can be as excellent as in standard generation.

Landslide-susceptibility analysis using light detection and ranging-derived digital elevation models and logistic regression models: a case study in Mizunami City, Japan

NASA Astrophysics Data System (ADS)

Wang, Liang-Jie; Sawada, Kazuhide; Moriguchi, Shuji

2013-01-01

To mitigate the damage caused by landslide disasters, different mathematical models have been applied to predict landslide spatial distribution characteristics. Although some researchers have achieved excellent results around the world, few studies take the spatial resolution of the database into account. Four types of digital elevation model (DEM) ranging from 2 to 20 m derived from light detection and ranging technology to analyze landslide susceptibility in Mizunami City, Gifu Prefecture, Japan, are presented. Fifteen landslide-causative factors are considered using a logistic-regression approach to create models for landslide potential analysis. Pre-existing landslide bodies are used to evaluate the performance of the four models. The results revealed that the 20-m model had the highest classification accuracy (71.9%), whereas the 2-m model had the lowest value (68.7%). In the 2-m model, 89.4% of the landslide bodies fit in the medium to very high categories. For the 20-m model, only 83.3% of the landslide bodies were concentrated in the medium to very high classes. When the cell size decreases from 20 to 2 m, the area under the relative operative characteristic increases from 0.68 to 0.77. Therefore, higher-resolution DEMs would provide better results for landslide-susceptibility mapping.

Intraoperative laser speckle contrast imaging for monitoring cerebral blood flow: results from a 10-patient pilot study

NASA Astrophysics Data System (ADS)

Richards, Lisa M.; Weber, Erica L.; Parthasarathy, Ashwin B.; Kappeler, Kaelyn L.; Fox, Douglas J.; Dunn, Andrew K.

2012-02-01

Monitoring cerebral blood flow (CBF) during neurosurgery can provide important physiological information for a variety of surgical procedures. Although multiple intraoperative vascular monitoring technologies are currently available, a quantitative method that allows for continuous monitoring is still needed. Laser speckle contrast imaging (LSCI) is an optical imaging method with high spatial and temporal resolution that has been widely used to image CBF in animal models in vivo. In this pilot clinical study, we adapted a Zeiss OPMI Pentero neurosurgical microscope to obtain LSCI images by attaching a camera and a laser diode. This LSCI adapted instrument has been used to acquire full field flow images from 10 patients during tumor resection procedures. The patient's ECG was recorded during acquisition and image registration was performed in post-processing to account for pulsatile motion artifacts. Digital photographs confirmed alignment of vasculature and flow images in four cases, and a relative change in blood flow was observed in two patients after bipolar cautery. The LSCI adapted instrument has the capability to produce real-time, full field CBF image maps with excellent spatial resolution and minimal intervention to the surgical procedure. Results from this study demonstrate the feasibility of using LSCI to monitor blood flow during neurosurgery.

Impaired performance on a rhesus monkey neuropsychological testing battery following simian immunodeficiency virus infection.

PubMed

Weed, Michael R; Gold, Lisa H; Polis, Ilham; Koob, George F; Fox, Howard S; Taffe, Michael A

2004-01-01

Infection with simian immunodeficiency virus (SIV) in macaques provides an excellent model of AIDS including HIV-induced central nervous system (CNS) pathology and cognitive/behavioral impairment. Recently a behavioral test battery has been developed for macaques based on the CANTAB human neuropsychological testing battery. As with human neuropsychological batteries, different tasks are thought to involve different neural substrates, and therefore performance profiles may assess function in particular brain regions. Ten rhesus monkeys were infected with SIV after being trained on two or more of the battery tasks addressing memory (delayed nonmatching to sample, DNMS), spatial working memory (using a self-ordered spatial search task, SOSS), motivation (progressive-ratio, PR), reaction time (RT), and/or fine motor skills (bimanual motor skill, BMS). Performance was compared to that of 9 uninfected monkeys. Overall, some aspect of performance was impaired in all 10 monkeys following infection. Consistent with results in human AIDS patients, individual performance was impaired most often on battery tasks thought to be sensitive to frontostriatal dopaminergic functioning such as SOSS, RT, and BMS. These results further demonstrate the similarity of behavioral impairment produced by SIV and HIV on homologous behavioral tests, and establish the utility of the testing battery for further investigations into the CNS mechanisms of the reported behavioral changes.

Mapping The Temporal and Spatial Variability of Soil Moisture Content Using Proximal Soil Sensing

NASA Astrophysics Data System (ADS)

Virgawati, S.; Mawardi, M.; Sutiarso, L.; Shibusawa, S.; Segah, H.; Kodaira, M.

2018-05-01

In studies related to soil optical properties, it has been proven that visual and NIR soil spectral response can predict soil moisture content (SMC) using proper data analysis techniques. SMC is one of the most important soil properties influencing most physical, chemical, and biological soil processes. The problem is how to provide reliable, fast and inexpensive information of SMC in the subsurface from numerous soil samples and repeated measurement. The use of spectroscopy technology has emerged as a rapid and low-cost tool for extensive investigation of soil properties. The objective of this research was to develop calibration models based on laboratory Vis-NIR spectroscopy to estimate the SMC at four different growth stages of the soybean crop in Yogyakarta Province. An ASD Field-spectrophotoradiometer was used to measure the reflectance of soil samples. The partial least square regression (PLSR) was performed to establish the relationship between the SMC with Vis-NIR soil reflectance spectra. The selected calibration model was used to predict the new samples of SMC. The temporal and spatial variability of SMC was performed in digital maps. The results revealed that the calibration model was excellent for SMC prediction. Vis-NIR spectroscopy was a reliable tool for the prediction of SMC.

Multiscale information modelling for heart morphogenesis

NASA Astrophysics Data System (ADS)

Abdulla, T.; Imms, R.; Schleich, J. M.; Summers, R.

2010-07-01

Science is made feasible by the adoption of common systems of units. As research has become more data intensive, especially in the biomedical domain, it requires the adoption of a common system of information models, to make explicit the relationship between one set of data and another, regardless of format. This is being realised through the OBO Foundry to develop a suite of reference ontologies, and NCBO Bioportal to provide services to integrate biomedical resources and functionality to visualise and create mappings between ontology terms. Biomedical experts tend to be focused at one level of spatial scale, be it biochemistry, cell biology, or anatomy. Likewise, the ontologies they use tend to be focused at a particular level of scale. There is increasing interest in a multiscale systems approach, which attempts to integrate between different levels of scale to gain understanding of emergent effects. This is a return to physiological medicine with a computational emphasis, exemplified by the worldwide Physiome initiative, and the European Union funded Network of Excellence in the Virtual Physiological Human. However, little work has been done on how information modelling itself may be tailored to a multiscale systems approach. We demonstrate how this can be done for the complex process of heart morphogenesis, which requires multiscale understanding in both time and spatial domains. Such an effort enables the integration of multiscale metrology.

On the simulation and mitigation of anisoplanatic optical turbulence for long range imaging

NASA Astrophysics Data System (ADS)

Hardie, Russell C.; LeMaster, Daniel A.

2017-05-01

We describe a numerical wave propagation method for simulating long range imaging of an extended scene under anisoplanatic conditions. Our approach computes an array of point spread functions (PSFs) for a 2D grid on the object plane. The PSFs are then used in a spatially varying weighted sum operation, with an ideal image, to produce a simulated image with realistic optical turbulence degradation. To validate the simulation we compare simulated outputs with the theoretical anisoplanatic tilt correlation and differential tilt variance. This is in addition to comparing the long- and short-exposure PSFs, and isoplanatic angle. Our validation analysis shows an excellent match between the simulation statistics and the theoretical predictions. The simulation tool is also used here to quantitatively evaluate a recently proposed block- matching and Wiener filtering (BMWF) method for turbulence mitigation. In this method block-matching registration algorithm is used to provide geometric correction for each of the individual input frames. The registered frames are then averaged and processed with a Wiener filter for restoration. A novel aspect of the proposed BMWF method is that the PSF model used for restoration takes into account the level of geometric correction achieved during image registration. This way, the Wiener filter is able fully exploit the reduced blurring achieved by registration. The BMWF method is relatively simple computationally, and yet, has excellent performance in comparison to state-of-the-art benchmark methods.

Imaging Ca2+ with a Fluorescent Rhodol.

PubMed

Contractor, Alisha A; Miller, Evan W

2018-01-16

Ca 2+ mediates a host of biochemical and biophysical signaling processes in cells. The development of synthetic, Ca 2+ -sensitive fluorophores has played an instrumental role in our understanding of the temporal and spatial dynamics of Ca 2+ . Coupling Ca 2+ -selective ligands to fluorescent reporters has provided a wealth of excellent indicators that span the visible excitation and emission spectrum and possess Ca 2+ affinities suited to a variety of cellular contexts. One underdeveloped area is the use of hybrid rhodamine/fluorescein fluorophores, or rhodols, in the context of Ca 2+ sensing. Rhodols are bright and photostable and have good two-photon absorption cross sections (σ TPA ), making them excellent candidates for incorporation into Ca 2+ -sensing scaffolds. Here, we present the design, synthesis, and application of rhodol Ca 2+ sensor 1 (RCS-1), a chlorinated pyrrolidine-based rhodol. RCS-1 possesses a Ca 2+ binding constant of 240 nM and a 10-fold turn response to Ca 2+ . RCS-1 effectively absorbs infrared light and has a σ TPA of 76 GM at 840 nm, 3-fold greater than that of its fluorescein-based counterpart. The acetoxy-methyl ester of RCS-1 stains the cytosol of live cells, enabling observation of Ca 2+ fluctuations and cultured neurons using both one- and two-photon illumination. Together, these results demonstrate the utility of rhodol-based scaffolds for Ca 2+ sensing using two-photon illumination in neurons.

Evaluation of fast highly undersampled contrast-enhanced MR angiography (sparse CE-MRA) in intracranial applications - initial study.

PubMed

Gratz, Marcel; Schlamann, Marc; Goericke, Sophia; Maderwald, Stefan; Quick, Harald H

2017-03-01

To assess the image quality of sparsely sampled contrast-enhanced MR angiography (sparse CE-MRA) providing high spatial resolution and whole-head coverage. Twenty-three patients scheduled for contrast-enhanced MR imaging of the head, (N = 19 with intracranial pathologies, N = 9 with vascular diseases), were included. Sparse CE-MRA at 3 Tesla was conducted using a single dose of contrast agent. Two neuroradiologists independently evaluated the data regarding vascular visibility and diagnostic value of overall 24 parameters and vascular segments on a 5-point ordinary scale (5 = very good, 1 = insufficient vascular visibility). Contrast bolus timing and the resulting arterio-venous overlap was also evaluated. Where available (N = 9), sparse CE-MRA was compared to intracranial Time-of-Flight MRA. The overall rating across all patients for sparse CE-MRA was 3.50 ± 1.07. Direct influence of the contrast bolus timing on the resulting image quality was observed. Overall mean vascular visibility and image quality across different features was rated good to intermediate (3.56 ± 0.95). The average performance of intracranial Time-of-Flight was rated 3.84 ± 0.87 across all patients and 3.54 ± 0.62 across all features. Sparse CE-MRA provides high-quality 3D MRA with high spatial resolution and whole-head coverage within short acquisition time. Accurate contrast bolus timing is mandatory. • Sparse CE-MRA enables fast vascular imaging with full brain coverage. • Volumes with sub-millimetre resolution can be acquired within 10 seconds. • Reader's ratings are good to intermediate and dependent on contrast bolus timing. • The method provides an excellent overview and allows screening for vascular pathologies.

EO-1 Prototyping for Environmental Applications

NASA Astrophysics Data System (ADS)

Campbell, P. K.; Middleton, E.; Ungar, S.; Zhang, Q.; Ong, L.; Huemmrich, K. F.

2009-12-01

The Earth Observing One (EO-1) Mission, launched in November, 2000 as part of NASA’s New Millennium Program, is in it’s eight year of operation. From the start it was recognized that a key criteria for evaluating the EO-1 technology and outlining future Earth science mission needs is the ability of the technology to characterize terrestrial surface state and processes. EO-1 is participating in a broad range of investigations, demonstrating the utility of imaging spectroscopy in applications relating to forestry, agriculture, species discrimination, invasive species, desertification, land-use, vulcanization, fire management, homeland security, natural and anthropogenic hazards and disaster assessments and has provided characterization for a variety of instruments on EOS platforms. By generating a high spectral and spatial resolution data set for the corral reefs and islands, it is contributing for realizing the goals of the National Decadal survey and providing an excellent platform for testing strategies to be employed in the HyspIRI mission. The EO1 Mission Science Office (MSO) is developing tools and prototypes for new science products, addressing the HyspIRI goals to assess vegetation status and health and provide vegetation spectral bio-indicators and biophysical parameters such as LAI and fAPAR at <100 m spatial resolution. These are being used to resolve variability in heterogeneous areas (e.g. agriculture, narrow shapes, urban and developed lands) and for managed ecosystems less than 10 km2. A set of invariable reference targets (e.g. sun, moon, deserts, Antarctica) are being characterised to allow cross-calibration of current and future EO sensors, comparison of land products generated by multiple sensors and retroactive processing of time series data. Such products are needed to develop Science Requirements for the next generation of hyperspectral satellite sensors and to address global societal needs.

GISpark: A Geospatial Distributed Computing Platform for Spatiotemporal Big Data

NASA Astrophysics Data System (ADS)

Wang, S.; Zhong, E.; Wang, E.; Zhong, Y.; Cai, W.; Li, S.; Gao, S.

2016-12-01

Geospatial data are growing exponentially because of the proliferation of cost effective and ubiquitous positioning technologies such as global remote-sensing satellites and location-based devices. Analyzing large amounts of geospatial data can provide great value for both industrial and scientific applications. Data- and compute- intensive characteristics inherent in geospatial big data increasingly pose great challenges to technologies of data storing, computing and analyzing. Such challenges require a scalable and efficient architecture that can store, query, analyze, and visualize large-scale spatiotemporal data. Therefore, we developed GISpark - a geospatial distributed computing platform for processing large-scale vector, raster and stream data. GISpark is constructed based on the latest virtualized computing infrastructures and distributed computing architecture. OpenStack and Docker are used to build multi-user hosting cloud computing infrastructure for GISpark. The virtual storage systems such as HDFS, Ceph, MongoDB are combined and adopted for spatiotemporal data storage management. Spark-based algorithm framework is developed for efficient parallel computing. Within this framework, SuperMap GIScript and various open-source GIS libraries can be integrated into GISpark. GISpark can also integrated with scientific computing environment (e.g., Anaconda), interactive computing web applications (e.g., Jupyter notebook), and machine learning tools (e.g., TensorFlow/Orange). The associated geospatial facilities of GISpark in conjunction with the scientific computing environment, exploratory spatial data analysis tools, temporal data management and analysis systems make up a powerful geospatial computing tool. GISpark not only provides spatiotemporal big data processing capacity in the geospatial field, but also provides spatiotemporal computational model and advanced geospatial visualization tools that deals with other domains related with spatial property. We tested the performance of the platform based on taxi trajectory analysis. Results suggested that GISpark achieves excellent run time performance in spatiotemporal big data applications.

Late Holocene spatio-temporal variability of the south Greenland Ice Sheet and adjacent mountain glaciers

NASA Astrophysics Data System (ADS)

Sinclair, G.; Carlson, A. E.; Rood, D. H.; Axford, Y.

2017-12-01

The late Holocene, with its spatially complex pattern of centennial-scale climate variation, is an ideal time period to test the response of the cryosphere to atmospheric and oceanic temperature changes. The south Greenland Ice Sheet (sGrIS), with its proximity to areas of North Atlantic Deep Water formation and a large spectrum of glaciological regimes over a relatively small area, provides an excellent location to examine the spatial heterogeneity of ice-sheet and glacier responses to climate change. Here, we will present 50 Be-10 surface exposure ages from eight moraines in six locations around the margin of the sGrIS. These moraines are located just outboard of historical moraines, and will therefore allow us to constrain the timing of the most extensive prehistoric late-Holocene advance and retreat of ice margins draining the sGrIS and independent valley glaciers. The dataset includes both marine- and land-terminating glaciers draining the sGrIS, the low-altitude Qassimiut lobe, the high-altitude alpine Julianhåb ice cap and isolated valley glaciers. This diverse dataset will allow us to determine to what extent late-Holocene centennial-scale behavior of the ice-sheet and glacier margins were synchronous, perhaps in response to an external climate forcing, or more stochastic, governed instead by local factors such as basal thermal regime, bedrock topography, or microclimates. This has implications for understanding the forcings and responses of cryospheric changes at timescales relevant to human society. In addition to providing context for paleoclimatic and glacial geologic investigations, this work will inform future sea-level projections by providing targets for validating high-resolution ice-sheet and glacier models.

Potential for Imaging Engineered Tissues with X-Ray Phase Contrast

PubMed Central

Appel, Alyssa; Anastasio, Mark A.

2011-01-01

As the field of tissue engineering advances, it is crucial to develop imaging methods capable of providing detailed three-dimensional information on tissue structure. X-ray imaging techniques based on phase-contrast (PC) have great potential for a number of biomedical applications due to their ability to provide information about soft tissue structure without exogenous contrast agents. X-ray PC techniques retain the excellent spatial resolution, tissue penetration, and calcified tissue contrast of conventional X-ray techniques while providing drastically improved imaging of soft tissue and biomaterials. This suggests that X-ray PC techniques are very promising for evaluation of engineered tissues. In this review, four different implementations of X-ray PC imaging are described and applications to tissues of relevance to tissue engineering reviewed. In addition, recent applications of X-ray PC to the evaluation of biomaterial scaffolds and engineered tissues are presented and areas for further development and application of these techniques are discussed. Imaging techniques based on X-ray PC have significant potential for improving our ability to image and characterize engineered tissues, and their continued development and optimization could have significant impact on the field of tissue engineering. PMID:21682604

Adjoint assimilation of altimetric, surface drifter, and hydrographic data in a quasi-geostrophic model of the Azores Current

NASA Astrophysics Data System (ADS)

Morrow, Rosemary; de Mey, Pierre

1995-12-01

The flow characteristics in the region of the Azores Current are investigated by assimilating TOPEX/POSEIDON and ERS 1 altimeter data into the multilevel Harvard quasigeostrophic (QG) model with open boundaries (Miller et al., 1983) using an adjoint variational scheme (Moore, 1991). The study site lies in the path of the Azores Current, where a branch retroflects to the south in the vicinity of the Madeira Rise. The region was the site of an intensive field program in 1993, SEMAPHORE. We had two main aims in this adjoint assimilation project. The first was to see whether the adjoint method could be applied locally to optimize an initial guess field, derived from the continous assimilation of altimetry data using optimal interpolation (OI). The second aim was to assimilate a variety of different data sets and evaluate their importance in constraining our QG model. The adjoint assimilation of surface data was effective in optimizing the initial conditions from OI. After 20 iterations the cost function was generally reduced by 50-80%, depending on the chosen data constraints. The primary adjustment process was via the barotropic mode. Altimetry proved to be a good constraint on the variable flow field, in particular, for constraining the barotropic field. The excellent data quality of the TOPEX/POSEIDON (T/P) altimeter data provided smooth and reliable forcing; but for our mesoscale study in a region of long decorrelation times O(30 days), the spatial coverage from the combined T/P and ERS 1 data sets was more important for constraining the solution and providing stable flow at all levels. Surface drifters provided an excellent constraint on both the barotropic and baroclinic model fields. More importantly, the drifters provided a reliable measure of the mean field. Hydrographic data were also applied as a constraint; in general, hydrography provided a weak but effective constraint on the vertical Rossby modes in the model. Finally, forecasts run over a 2-month period indicate that the initial conditions optimized by the 20-day adjoint assimilation provide more stable, longer-term forecasts.

Grading of cervical intraepithelial neoplasia using spatial frequency for optical histology

NASA Astrophysics Data System (ADS)

Pu, Yang; Jagtap, Jaidip; Pradhan, Asima; Alfano, Robert R.

2014-03-01

It is important to detect cervical dysplasia, Cervical Intraepithelial Neoplasia (CIN). CIN is the potentially premalignant and abnormal squamous cells on surface of cervix. In this study, the spatial frequency spectra of pre-cancer cervical tissues are used to detect differences among different grades of human cervical tissues. Seven sets of thick tissue sections of human cervix of normal, CIN 1, CIN 2, and CIN 3 tissues are studied. The confocal microscope images of the stromal region of normal and CIN human tissues were analyzed using Fast Fourier Transform (FFT) to generate the spatial spectra. It is observed that higher frequency components exist in CIN tissues than those in normal tissue, as well as those in higher grade CIN tissue than those in lower grade CIN tissue. The width of the spatial frequency of different types of tissues is used to create a criterion for CIN grading by training a support vector machine (SVM) classifier. The results show that the randomness of tissue structures from normal to different stages of precancer in cervical tissue can be recognized by fingerprints of the spatial frequency. The efficacy of spatial frequency analysis for CIN grading is evaluated as excellent since high AUC (area under the ROC curve), sensitivity and specificity are obtained by the statistics study. This works lays the foundation of using spatial frequency spectra for a histology evaluation.

Computation of the spectrum of spatial Lyapunov exponents for the spatially extended beam-plasma systems and electron-wave devices

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hramov, Alexander E.; Saratov State Technical University, Politechnicheskaja str., 77, Saratov 410054; Koronovskii, Alexey A.

2012-08-15

The spectrum of Lyapunov exponents is powerful tool for the analysis of the complex system dynamics. In the general framework of nonlinear dynamics, a number of the numerical techniques have been developed to obtain the spectrum of Lyapunov exponents for the complex temporal behavior of the systems with a few degree of freedom. Unfortunately, these methods cannot be applied directly to analysis of complex spatio-temporal dynamics of plasma devices which are characterized by the infinite phase space, since they are the spatially extended active media. In the present paper, we propose the method for the calculation of the spectrum ofmore » the spatial Lyapunov exponents (SLEs) for the spatially extended beam-plasma systems. The calculation technique is applied to the analysis of chaotic spatio-temporal oscillations in three different beam-plasma model: (1) simple plasma Pierce diode, (2) coupled Pierce diodes, and (3) electron-wave system with backward electromagnetic wave. We find an excellent agreement between the system dynamics and the behavior of the spectrum of the spatial Lyapunov exponents. Along with the proposed method, the possible problems of SLEs calculation are also discussed. It is shown that for the wide class of the spatially extended systems, the set of quantities included in the system state for SLEs calculation can be reduced using the appropriate feature of the plasma systems.« less

Equality of opportunities in geosciences: The EGU Awards Committee experience

NASA Astrophysics Data System (ADS)

Karatekin, Özgür

2017-04-01

Scientists are evaluated on the basis of creativity and productivity, and their scientific excellence are rewarded by scientific associations. Providing equal opportunities and ensuring balance is a strict necessity when recognizing scientific excellence. The processes and procedures that lead to the recognition of excellence has to be transparent and free of gender biases. However, establishment of clear and transparent evaluation criteria and performance metrics in order to provide equal opportunities to researchers across gender, continents and ethnic groups can be challenging since the definition of scientific excellence is elusive. This talk aims to present the experience and the efforts of the European Geosciences Union to ensure balance, with a particular focus on gender balance. Data and statistics will be presented in the attempt to provide constructive indications to get to the target of giving equal opportunities to researchers across gender, continents and ethnic groups.

Improving the Pedagogy of Capital Structure Theory: An Excel Application

ERIC Educational Resources Information Center

Baltazar, Ramon; Maybee, Bryan; Santos, Michael R.

2012-01-01

This paper uses Excel to enhance the pedagogy of capital structure theory for corporate finance instructors and students. We provide a lesson plan that utilizes Excel spreadsheets and graphs to develop understanding of the theory. The theory is introduced in three scenarios that utilize Modigliani & Miller's Propositions and…

A Program Aimed toward Inclusive Excellence for Underrepresented Undergraduate Women in the Sciences

ERIC Educational Resources Information Center

Katz, Laura A.; Aloisio, Kathryn M.; Horton, Nicholas J.; Ly, Minh; Pruss, Sara; Queeney, Kate; Rowen, Cate; DiBartolo, Patricia Marten

2017-01-01

Created to foster inclusive excellence, Smith College's Achieving Excellence in Mathematics, Engineering, and Science (AEMES) Scholars program provides early faculty-mentored research opportunities and other programming as a way to foster success in academic outcomes for underrepresented women in science. Using academic record data, we compared…

Insights into a microwave susceptible agent for minimally invasive microwave tumor thermal therapy.

PubMed

Shi, Haitang; Liu, Tianlong; Fu, Changhui; Li, Linlin; Tan, Longfei; Wang, Jingzhuo; Ren, Xiangling; Ren, Jun; Wang, Jianxin; Meng, Xianwei

2015-03-01

This work develops a kind of sodium alginate (SA) microcapsules as microwave susceptible agents for in vivo tumor microwave thermal therapy for the first time. Due to the excellent microwave susceptible properties and low bio-toxicity, excellent therapy efficiency can be achieved with the tumor inhibiting ratio of 97.85% after one-time microwave thermal therapy with ultralow power (1.8 W, 450 MHz). Meanwhile, the mechanism of high microwave heating efficiency was confirmed via computer-simulated model in theory, demonstrating that the spatial confinement efficiency of microcapsule walls endows the inside ions with high microwave susceptible properties. This strategy offers tremendous potential applications in clinical tumor treatment with the benefits of safety, reliability, effectiveness and minimally invasiveness. Copyright © 2014 Elsevier Ltd. All rights reserved.

Philanthropic Donor Perspectives on Supporting Nursing Excellence in a Community Hospital.

PubMed

Fickley, Sharon K; Mishler, Ray R; Black, Amelia S; DeGuzman, Pam B

2016-11-01

The purpose of this research is to explore donors' perspectives on support of nursing excellence in a community hospital. Philanthropic support is rapidly becoming critical to support nursing excellence in hospitals, including continuing education, nursing research, and professional development. However, no research has examined the experience of private donors who support nursing programs in community hospitals. Structured interviews were conducted with individuals with a history of providing significant financial support (gifts >$50 000) targeted specifically for nursing in a 176- bed community hospital in the southeastern United States. Analysis was performed using descriptive content analysis. Four themes emerged that centered around making a difference, helping nurses meet new challenges, an existing foundation of service, and valuing excellent nursing care received. This research provides specific information that nursing administrators can use when seeking philanthropic gifts to support nursing excellence programs in US community hospitals.

Plasmon-emitter interaction using integrated ring grating-nanoantenna structures.

PubMed

Rahbany, Nancy; Geng, Wei; Bachelot, Renaud; Couteau, Christophe

2017-05-05

Overcoming the diffraction limit to achieve high optical resolution is one of the main challenges in the fields of plasmonics, nanooptics and nanophotonics. In this work, we introduce novel plasmonic structures consisting of nanoantennas (nanoprisms, single bowtie nanoantennas and double bowtie nanoantennas) integrated in the center of ring diffraction gratings. Propagating surface plasmon polaritons (SPPs) are generated by the ring grating and coupled with localized surface plasmons (LSPs) at the nanoantennas exciting emitters placed in their gap. SPPs are widely used for optical waveguiding but provide low resolution due to their weak spatial confinement. In contrast, LSPs provide excellent sub-wavelength confinement but induce large losses. The phenomenon of SPP-LSP coupling witnessed in our structures allows for achieving more precise focusing at the nanoscale, causing an increase in the fluorescence emission of the emitters. Finite-difference time-domain simulations as well as experimental fabrication and optical characterization results are presented to study plasmon-emitter coupling between an ensemble of dye molecules and our integrated plasmonic structures. A comparison is given to highlight the importance of each structure on the photoluminescence and radiative decay enhancement of the molecules.

Feasibility Study For A Spaceborne Ozone/Aerosol Lidar System

NASA Technical Reports Server (NTRS)

Campbell, Richard E.; Browell, Edward V.; Ismail, Syed; Dudelzak, Alexander E.; Carswell, Allan I.; Ulitsky, Arkady

1997-01-01

Because ozone provides a shield against harmful ultraviolet radiation, determines the temperature profile in the stratosphere, plays important roles in tropospheric chemistry and climate, and is a health risk near the surface, changes in natural ozone layers at different altitudes and their global impact are being intensively researched. Global ozone coverage is currently provided by passive optical and microwave satellite sensors that cannot deliver high spatial resolution measurements and have particular limitations in the troposphere. Vertical profiling DIfferential Absorption Lidars (DIAL) have shown excellent range-resolved capabilities, but these systems have been large, inefficient, and have required continuous technical attention for long term operations. Recently, successful, autonomous DIAL measurements have been performed from a high-altitude aircraft (LASE - Lidar Atmospheric Sensing Experiment), and a space-qualified aerosol lidar system (LITE - Laser In-space Technology Experiment) has performed well on Shuttle. Based on the above successes, NASA and the Canadian Space Agency are jointly studying the feasibility of developing ORACLE (Ozone Research with Advanced Cooperative Lidar Experiments), an autonomously operated, compact DIAL instrument to be placed in orbit using a Pegasus class launch vehicle.

Utilizing Skylab data in on-going resources management programs in the state of Ohio

NASA Technical Reports Server (NTRS)

Baldridge, P. E. (Principal Investigator); Goesling, P. H.; Martin, T. A.; Wukelic, G. E.; Stephan, J. G.; Smail, H. E.; Ebbert, T. F.

1975-01-01

The author has identified the following significant results. The use of Skylab imagery for total area woodland surveys was found to be more accurate and cheaper than conventional surveys using aerial photo-plot techniques. Machine-aided (primarily density slicing) analyses of Skylab 190A and 190B color and infrared color photography demonstrated the feasibility of using such data for differentiating major timber classes including pines, hardwoods, mixed, cut, and brushland providing such analyses are made at scales of 1:24,000 and larger. Manual and machine-assisted image analysis indicated that spectral and spatial capabilities of Skylab EREP photography are adequate to distinguish most parameters of current, coal surface mining concern associated with: (1) active mining, (2) orphan lands, (3) reclaimed lands, and (4) active reclamation. Excellent results were achieved when comparing Skylab and aerial photographic interpretations of detailed surface mining features. Skylab photographs when combined with other data bases (e.g., census, agricultural land productivity, and transportation networks), provide a comprehensive, meaningful, and integrated view of major elements involved in the urbanization/encroachment process.

Plasmon-emitter interaction using integrated ring grating-nanoantenna structures

NASA Astrophysics Data System (ADS)

Rahbany, Nancy; Geng, Wei; Bachelot, Renaud; Couteau, Christophe

2017-05-01

Overcoming the diffraction limit to achieve high optical resolution is one of the main challenges in the fields of plasmonics, nanooptics and nanophotonics. In this work, we introduce novel plasmonic structures consisting of nanoantennas (nanoprisms, single bowtie nanoantennas and double bowtie nanoantennas) integrated in the center of ring diffraction gratings. Propagating surface plasmon polaritons (SPPs) are generated by the ring grating and coupled with localized surface plasmons (LSPs) at the nanoantennas exciting emitters placed in their gap. SPPs are widely used for optical waveguiding but provide low resolution due to their weak spatial confinement. In contrast, LSPs provide excellent sub-wavelength confinement but induce large losses. The phenomenon of SPP-LSP coupling witnessed in our structures allows for achieving more precise focusing at the nanoscale, causing an increase in the fluorescence emission of the emitters. Finite-difference time-domain simulations as well as experimental fabrication and optical characterization results are presented to study plasmon-emitter coupling between an ensemble of dye molecules and our integrated plasmonic structures. A comparison is given to highlight the importance of each structure on the photoluminescence and radiative decay enhancement of the molecules.

Combination microwave ovens: an innovative design strategy.

PubMed

Tinga, Wayne R; Eke, Ken

2012-01-01

Reducing the sensitivity of microwave oven heating and cooking performance to load volume, load placement and load properties has been a long-standing challenge for microwave and microwave-convection oven designers. Conventional design problem and solution methods are reviewed to provide greater insight into the challenge and optimum operation of a microwave oven after which a new strategy is introduced. In this methodology, a special load isolating and energy modulating device called a transducer-exciter is used containing an iris, a launch box, a phase, amplitude and frequency modulator and a coupling plate designed to provide spatially distributed coupling to the oven. This system, when applied to a combined microwave-convection oven, gives astounding performance improvements to all kinds of baked and roasted foods including sensitive items such as cakes and pastries, with the only compromise being a reasonable reduction in the maximum available microwave power. Large and small metal utensils can be used in the oven with minimal or no performance penalty on energy uniformity and cooking results. Cooking times are greatly reduced from those in conventional ovens while maintaining excellent cooking performance.

Probing condensed matter physics with magnetometry based on nitrogen-vacancy centres in diamond

NASA Astrophysics Data System (ADS)

Casola, Francesco; van der Sar, Toeno; Yacoby, Amir

2018-01-01

The magnetic fields generated by spins and currents provide a unique window into the physics of correlated-electron materials and devices. First proposed only a decade ago, magnetometry based on the electron spin of nitrogen-vacancy (NV) defects in diamond is emerging as a platform that is excellently suited for probing condensed matter systems; it can be operated from cryogenic temperatures to above room temperature, has a dynamic range spanning from direct current to gigahertz and allows sensor-sample distances as small as a few nanometres. As such, NV magnetometry provides access to static and dynamic magnetic and electronic phenomena with nanoscale spatial resolution. Pioneering work has focused on proof-of-principle demonstrations of its nanoscale imaging resolution and magnetic field sensitivity. Now, experiments are starting to probe the correlated-electron physics of magnets and superconductors and to explore the current distributions in low-dimensional materials. In this Review, we discuss the application of NV magnetometry to the exploration of condensed matter physics, focusing on its use to study static and dynamic magnetic textures and static and dynamic current distributions.

Technical Excellence: A Requirement for Good Engineering

NASA Technical Reports Server (NTRS)

Gill, Paul S.; Vaughan, William W.

2008-01-01

Technical excellence is a requirement for good engineering. Technical excellence has many different ways of expressing itself within engineering. NASA has initiatives that address the enhancement of the Agency's technical excellence and thrust to maintain the associated high level of performance by the Agency on current programs/projects and as it moves into the Constellation Program and the return to the Moon with plans to visit Mars. This paper addresses some of the key initiatives associated with NASA's technical excellence thrust. Examples are provided to illustrate some results being achieved and plans to enhance these initiatives.

An Excel macro for generating trilinear plots.

PubMed

Shikaze, Steven G; Crowe, Allan S

2007-01-01

This computer note describes a method for creating trilinear plots in Microsoft Excel. Macros have been created in MS Excel's internal language: Visual Basic for Applications (VBA). A simple form has been set up to allow the user to input data from an Excel worksheet. The VBA macro is used to convert the triangular data (which consist of three columns of percentage data) into X-Y data. The macro then generates the axes, labels, and grid for the trilinear plot. The X-Y data are plotted as scatter data in Excel. By providing this macro in Excel, users can create trilinear plots in a quick, inexpensive manner.

Side readout of long scintillation crystal elements with digital SiPM for TOF-DOI PET.

PubMed

Yeom, Jung Yeol; Vinke, Ruud; Levin, Craig S

2014-12-01

Side readout of scintillation light from crystal elements in positron emission tomography (PET) is an alternative to conventional end-readout configurations, with the benefit of being able to provide accurate depth-of-interaction (DOI) information and good energy resolution while achieving excellent timing resolution required for time-of-flight PET. This paper explores different readout geometries of scintillation crystal elements with the goal of achieving a detector that simultaneously achieves excellent timing resolution, energy resolution, spatial resolution, and photon sensitivity. The performance of discrete LYSO scintillation elements of different lengths read out from the end/side with digital silicon photomultipliers (dSiPMs) has been assessed. Compared to 3 × 3 × 20 mm(3) LYSO crystals read out from their ends with a coincidence resolving time (CRT) of 162 ± 6 ps FWHM and saturated energy spectra, a side-readout configuration achieved an excellent CRT of 144 ± 2 ps FWHM after correcting for timing skews within the dSiPM and an energy resolution of 11.8% ± 0.2% without requiring energy saturation correction. Using a maximum likelihood estimation method on individual dSiPM pixel response that corresponds to different 511 keV photon interaction positions, the DOI resolution of this 3 × 3 × 20 mm(3) crystal side-readout configuration was computed to be 0.8 mm FWHM with negligible artifacts at the crystal ends. On the other hand, with smaller 3 × 3 × 5 mm(3) LYSO crystals that can also be tiled/stacked to provide DOI information, a timing resolution of 134 ± 6 ps was attained but produced highly saturated energy spectra. The energy, timing, and DOI resolution information extracted from the side of long scintillation crystal elements coupled to dSiPM have been acquired for the first time. The authors conclude in this proof of concept study that such detector configuration has the potential to enable outstanding detector performance in terms of timing, energy, and DOI resolution.

Side readout of long scintillation crystal elements with digital SiPM for TOF-DOI PET

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yeom, Jung Yeol, E-mail: yeomjy@kumoh.ac.kr, E-mail: cslevin@stanford.edu; Vinke, Ruud; Levin, Craig S., E-mail: yeomjy@kumoh.ac.kr, E-mail: cslevin@stanford.edu

Purpose: Side readout of scintillation light from crystal elements in positron emission tomography (PET) is an alternative to conventional end-readout configurations, with the benefit of being able to provide accurate depth-of-interaction (DOI) information and good energy resolution while achieving excellent timing resolution required for time-of-flight PET. This paper explores different readout geometries of scintillation crystal elements with the goal of achieving a detector that simultaneously achieves excellent timing resolution, energy resolution, spatial resolution, and photon sensitivity. Methods: The performance of discrete LYSO scintillation elements of different lengths read out from the end/side with digital silicon photomultipliers (dSiPMs) has been assessed.more » Results: Compared to 3 × 3 × 20 mm{sup 3} LYSO crystals read out from their ends with a coincidence resolving time (CRT) of 162 ± 6 ps FWHM and saturated energy spectra, a side-readout configuration achieved an excellent CRT of 144 ± 2 ps FWHM after correcting for timing skews within the dSiPM and an energy resolution of 11.8% ± 0.2% without requiring energy saturation correction. Using a maximum likelihood estimation method on individual dSiPM pixel response that corresponds to different 511 keV photon interaction positions, the DOI resolution of this 3 × 3 × 20 mm{sup 3} crystal side-readout configuration was computed to be 0.8 mm FWHM with negligible artifacts at the crystal ends. On the other hand, with smaller 3 × 3 × 5 mm{sup 3} LYSO crystals that can also be tiled/stacked to provide DOI information, a timing resolution of 134 ± 6 ps was attained but produced highly saturated energy spectra. Conclusions: The energy, timing, and DOI resolution information extracted from the side of long scintillation crystal elements coupled to dSiPM have been acquired for the first time. The authors conclude in this proof of concept study that such detector configuration has the potential to enable outstanding detector performance in terms of timing, energy, and DOI resolution.« less

Three-dimensional structural imaging of starch granules by second-harmonic generation circular dichroism.

PubMed

Zhuo, G-Y; Lee, H; Hsu, K-J; Huttunen, M J; Kauranen, M; Lin, Y-Y; Chu, S-W

2014-03-01

Chirality is one of the most fundamental and essential structural properties of biological molecules. Many important biological molecules including amino acids and polysaccharides are intrinsically chiral. Conventionally, chiral species can be distinguished by interaction with circularly polarized light, and circular dichroism is one of the best-known approaches for chirality detection. As a linear optical process, circular dichroism suffers from very low signal contrast and lack of spatial resolution in the axial direction. It has been demonstrated that by incorporating nonlinear interaction with circularly polarized excitation, second-harmonic generation circular dichroism can provide much higher signal contrast. However, previous circular dichroism and second-harmonic generation circular dichroism studies are mostly limited to probe chiralities at surfaces and interfaces. It is known that second-harmonic generation, as a second-order nonlinear optical effect, provides excellent optical sectioning capability when combined with a laser-scanning microscope. In this work, we combine the axial resolving power of second-harmonic generation and chiral sensitivity of second-harmonic generation circular dichroism to realize three-dimensional chiral detection in biological tissues. Within the point spread function of a tight focus, second-harmonic generation circular dichroism could arise from the macroscopic supramolecular packing as well as the microscopic intramolecular chirality, so our aim is to clarify the origins of second-harmonic generation circular dichroism response in complicated three-dimensional biological systems. The sample we use is starch granules whose second-harmonic generation-active molecules are amylopectin with both microscopic chirality due to its helical structure and macroscopic chirality due to its crystallized packing. We found that in a starch granule, the second-harmonic generation for right-handed circularly polarized excitation is significantly different from second-harmonic generation for left-handed one, offering excellent second-harmonic generation circular dichroism contrast that approaches 100%. In addition, three-dimensional visualization of second-harmonic generation circular dichroism distribution with sub-micrometer spatial resolution is realized. We observed second-harmonic generation circular dichroism sign change across the starch granules, and the result suggests that in thick biological tissue, second-harmonic generation circular dichroism arises from macroscopic molecular packing. Our result provides a new method to visualize the organization of three-dimensional structures of starch granules. The second-harmonic generation circular dichroism imaging method expands the horizon of nonlinear chiroptical studies from simplified surface/solution environments to complicated biological tissues. © 2014 The Authors Journal of Microscopy © 2014 Royal Microscopical Society.

Volcanic geomorphology using TanDEM-X

NASA Astrophysics Data System (ADS)

Poland, Michael; Kubanek, Julia

2016-04-01

Topography is perhaps the most fundamental dataset for any volcano, yet is surprisingly difficult to collect, especially during the course of an eruption. For example, photogrammetry and lidar are time-intensive and often expensive, and they cannot be employed when the surface is obscured by clouds. Ground-based surveys can operate in poor weather but have poor spatial resolution and may expose personnel to hazardous conditions. Repeat passes of synthetic aperture radar (SAR) data provide excellent spatial resolution, but topography in areas of surface change (from vegetation swaying in the wind to physical changes in the landscape) between radar passes cannot be imaged. The German Space Agency's TanDEM-X satellite system, however, solves this issue by simultaneously acquiring SAR data of the surface using a pair of orbiting satellites, thereby removing temporal change as a complicating factor in SAR-based topographic mapping. TanDEM-X measurements have demonstrated exceptional value in mapping the topography of volcanic environments in as-yet limited applications. The data provide excellent resolution (down to ~3-m pixel size) and are useful for updating topographic data at volcanoes where surface change has occurred since the most recent topographic dataset was collected. Such data can be used for applications ranging from correcting radar interferograms for topography, to modeling flow pathways in support of hazards mitigation. The most valuable contributions, however, relate to calculating volume changes related to eruptive activity. For example, limited datasets have provided critical measurements of lava dome growth and collapse at volcanoes including Merapi (Indonesia), Colima (Mexico), and Soufriere Hills (Montserrat), and of basaltic lava flow emplacement at Tolbachik (Kamchatka), Etna (Italy), and Kīlauea (Hawai`i). With topographic data spanning an eruption, it is possible to calculate eruption rates - information that might not otherwise be available, as was the case at Tolbachik and Kīlauea. With a dense time series of TanDEM-X imagery over an erupting volcano, lava discharge over time can be determined. At Kīlauea, such results revealed relatively low rates of lava discharge during 2011-2014, which suggests a decrease in magma supply to the entire volcano, and which has important implications for lava flow hazards assessment. Some problems remain in using TanDEM-X data for volcano monitoring, like variations in satellite imaging geometry over time and distinguishing vegetation from the ground surface. Nonetheless, we are convinced of the high value of TanDEM-X data that, if utilized to its full potential, offer a unique opportunity for elucidating a range of volcanic processes around the world.

Blood Pressure Directed Booster Trainings Improve Intensive Care Unit Provider Retention of Excellent Cardiopulmonary Resuscitation Skills.

PubMed

Wolfe, Heather; Maltese, Matthew R; Niles, Dana E; Fischman, Elizabeth; Legkobitova, Veronika; Leffelman, Jessica; Berg, Robert A; Nadkarni, Vinay M; Sutton, Robert M

2015-11-01

Brief, intermittent cardiopulmonary resuscitation (CPR) training sessions, "Booster Trainings," improve CPR skill acquisition and short-term retention. The objective of this study was to incorporate arterial blood pressure (ABP) tracings into Booster Trainings to improve CPR skill retention. We hypothesized that ABP-directed CPR "Booster Trainings" would improve intensive care unit (ICU) provider 3-month retention of excellent CPR skills without need for interval retraining. A CPR manikin creating a realistic relationship between chest compression depth and ABP was used for training/testing. Thirty-six ICU providers were randomized to brief, bedside ABP-directed CPR manikin skill retrainings: (1) Booster Plus (ABP visible during training and testing) versus (2) Booster Alone (ABP visible only during training, not testing) versus (3) control (testing, no intervention). Subjects completed skill tests pretraining (baseline), immediately after training (acquisition), and then retention was assessed at 12 hours, 3 and 6 months. The primary outcome was retention of excellent CPR skills at 3 months. Excellent CPR was defined as systolic blood pressure of 100 mm Hg or higher and compression rate 100 to 120 per minute. Overall, 14 of 24 (58%) participants acquired excellent CPR skills after their initial training (Booster Plus 75% vs 50% Booster Alone, P = 0.21). Adjusted for age, ABP-trained providers were 5.2× more likely to perform excellent CPR after the initial training (95% confidence interval [95% CI], 1.3-21.2; P = 0.02), and to retain these skills at 12 hours (adjusted odds ratio, 4.4; 95% CI, 1.3-14.9; P = 0.018) and 3 months (adjusted odds ratio, 4.1; 95% CI, 1.2-13.9; P = 0.023) when compared to baseline performance. The ABP-directed CPR booster trainings improved ICU provider 3-month retention of excellent CPR skills without the need for interval retraining.

Abstract ID: 242 Simulation of a Fast Timing Micro-Pattern Gaseous Detector for TOF-PET.

PubMed

Radogna, Raffaella; Verwilligen, Piet

2018-01-01

Micro-Pattern Gas Detectors (MPGDs) are a new generation of gaseous detectors that have been developed thanks to advances in micro-structure technology. The main features of the MPGDs are: high rate capability (>50 MHz/cm 2 ); excellent spatial resolution (down to 50 μm); good time resolution (down to 3 ns); reduced radiation length, affordable costs, and possible flexible geometries. A new detector layout has been recently proposed that aims at combining both the high spatial resolution and high rate capability (100 MHz/cm 2 ) of the current state-of-the-art MPGDs with a high time resolution. This new type of MPGD is named the Fast Timing MPGD (FTM) detector [1,2]. The FTM developed for detecting charged particles can potentially reach sub-millimeter spatial resolution and 100 ps time resolution. This contribution introduces a Fast Timing MPGD technology optimized to detect photons, as an innovative PET imaging detector concept and emphases the importance of full detector simulation to guide the design of the detector geometry. The design and development of a new FTM, combining excellent time and spatial resolution, while exploiting the advantages of a reasonable energy resolution, will be a boost for the design of affordable TOF-PET scanner with improved image contrast. The use of such an affordable gas detector allows to instrument large areas in a cost-effective way, and to increase in image contrast for shorter scanning times (lowering the risk for the patient) and better diagnosis of the disease. In this report a dedicated simulation study is performed to optimize the detector design in the contest of the INFN project MPGD-Fatima. Results are obtained with ANSYS, COMSOL, GARFIELD++ and GEANT4 simulation tools. The final detector layout will be trade-off between fast time and good energy resolution. Copyright © 2017.

imDEV: a graphical user interface to R multivariate analysis tools in Microsoft Excel

USDA-ARS?s Scientific Manuscript database

Interactive modules for data exploration and visualization (imDEV) is a Microsoft Excel spreadsheet embedded application providing an integrated environment for the analysis of omics data sets with a user-friendly interface. Individual modules were designed to provide toolsets to enable interactive ...

cBathy: A robust algorithm for estimating nearshore bathymetry

USGS Publications Warehouse

Plant, Nathaniel G.; Holman, Rob; Holland, K. Todd

2013-01-01

A three-part algorithm is described and tested to provide robust bathymetry maps based solely on long time series observations of surface wave motions. The first phase consists of frequency-dependent characterization of the wave field in which dominant frequencies are estimated by Fourier transform while corresponding wave numbers are derived from spatial gradients in cross-spectral phase over analysis tiles that can be small, allowing high-spatial resolution. Coherent spatial structures at each frequency are extracted by frequency-dependent empirical orthogonal function (EOF). In phase two, depths are found that best fit weighted sets of frequency-wave number pairs. These are subsequently smoothed in time in phase 3 using a Kalman filter that fills gaps in coverage and objectively averages new estimates of variable quality with prior estimates. Objective confidence intervals are returned. Tests at Duck, NC, using 16 surveys collected over 2 years showed a bias and root-mean-square (RMS) error of 0.19 and 0.51 m, respectively but were largest near the offshore limits of analysis (roughly 500 m from the camera) and near the steep shoreline where analysis tiles mix information from waves, swash and static dry sand. Performance was excellent for small waves but degraded somewhat with increasing wave height. Sand bars and their small-scale alongshore variability were well resolved. A single ground truth survey from a dissipative, low-sloping beach (Agate Beach, OR) showed similar errors over a region that extended several kilometers from the camera and reached depths of 14 m. Vector wave number estimates can also be incorporated into data assimilation models of nearshore dynamics.

Retrieval of volcanic ash composition and particle size using high spatial resolution satellite data

NASA Astrophysics Data System (ADS)

Williams, D.; Ramsey, M. S.

2017-12-01

Volcanic ash plumes are a complex mixture of glass, mineral and lithic fragments in suspension with multiple gas species. These plumes are rapidly injected into the atmosphere, traveling thousands of kilometers from their source and affecting lives and property. One important use of satellite-based data has been to monitor volcanic plumes and their associated hazards. For distal plumes, the transmissive properties of volcanic ash in the thermal infrared (TIR) region allows the effective radii, composition, and density to be determined using approaches such as radiative transfer modelling. Proximal to the vent, however, the plume remains opaque, rendering this method invalid. We take a new approach to proximal plume analysis by assuming the plume's upper layer behaves spectrally as a solid surface in the TIR, due to the temperature and density of the plume soon after ejection from the vent. If this hypothesis is true, linear mixing models can be employed together with an accurate spectral library to compute both the particle size and petrology of every plume pixel. This method is being applied to high spatial resolution TIR data from the ASTER sensor using the newly developed ASTER Volcanic Ash Library (AVAL). AVAL serves as the spectral end-member suite from which to model plume data of 4 volcanoes: Chaitén, Puyehue-Cordón Caulle, Sakurajima and Soufrière Hills Volcano (SHV). Preliminary results indicate that this approach may be valid. The Sakurajima and SHV AVAL spectra provide an excellent fit to the ASTER data, whereas crushed high silica glass served as an appropriate end-member for both Chaitén and Puyehue-Cordón Caulle. In all cases, the best-fit size fractions are < 45 µm. Analysis of the proximal plume is essential in understanding the volcanic processes occurring within the vent. This study provides unprecedented detail of this region of the plume, further demonstrating the need for the continuation of high spatial resolution TIR satellite missions.

Local Competition and Metapopulation Processes Drive Long-Term Seagrass-Epiphyte Population Dynamics

PubMed Central

Lobelle, Delphine; Kenyon, Emma J.; Cook, Kevan J.; Bull, James C.

2013-01-01

It is well known that ecological processes such as population regulation and natural enemy interactions potentially occur over a range of spatial scales, and there is a substantial body of literature developing theoretical understanding of the interplay between these processes. However, there are comparatively few studies quantifying the long-term effects of spatial scaling in natural ecosystems. A key challenge is that trophic complexity in real-world biological communities quickly obscures the signal from a focal process. Seagrass meadows provide an excellent opportunity in this respect: in many instances, seagrasses effectively form extensive natural monocultures, in which hypotheses about endogenous dynamics can be formulated and tested. We present amongst the longest unbroken, spatially explict time series of seagrass abundance published to date. Data include annual measures of shoot density, total above-ground abundance, and associated epiphyte cover from five Zostera marina meadows distributed around the Isles of Scilly, UK, from 1996 to 2011. We explore empirical patterns at the local and metapopulation scale using standard time series analysis and develop a simple population dynamic model, testing the hypothesis that both local and metapopulation scale feedback processes are important. We find little evidence of an interaction between scales in seagrass dynamics but that both scales contribute approximately equally to observed local epiphyte abundance. By quantifying the long-term dynamics of seagrass-epiphyte interactions we show how measures of density and extent are both important in establishing baseline information relevant to predicting responses to environmental change and developing management plans. We hope that this study complements existing mechanistic studies of physiology, genetics and productivity in seagrass, whilst highlighting the potential of seagrass as a model ecosystem. More generally, this study provides a rare opportunity to test some of the predictions of ecological theory in a natural ecosystem of global conservation and economic value. PMID:23437313

Local competition and metapopulation processes drive long-term seagrass-epiphyte population dynamics.

PubMed

Lobelle, Delphine; Kenyon, Emma J; Cook, Kevan J; Bull, James C

2013-01-01

It is well known that ecological processes such as population regulation and natural enemy interactions potentially occur over a range of spatial scales, and there is a substantial body of literature developing theoretical understanding of the interplay between these processes. However, there are comparatively few studies quantifying the long-term effects of spatial scaling in natural ecosystems. A key challenge is that trophic complexity in real-world biological communities quickly obscures the signal from a focal process. Seagrass meadows provide an excellent opportunity in this respect: in many instances, seagrasses effectively form extensive natural monocultures, in which hypotheses about endogenous dynamics can be formulated and tested. We present amongst the longest unbroken, spatially explict time series of seagrass abundance published to date. Data include annual measures of shoot density, total above-ground abundance, and associated epiphyte cover from five Zostera marina meadows distributed around the Isles of Scilly, UK, from 1996 to 2011. We explore empirical patterns at the local and metapopulation scale using standard time series analysis and develop a simple population dynamic model, testing the hypothesis that both local and metapopulation scale feedback processes are important. We find little evidence of an interaction between scales in seagrass dynamics but that both scales contribute approximately equally to observed local epiphyte abundance. By quantifying the long-term dynamics of seagrass-epiphyte interactions we show how measures of density and extent are both important in establishing baseline information relevant to predicting responses to environmental change and developing management plans. We hope that this study complements existing mechanistic studies of physiology, genetics and productivity in seagrass, whilst highlighting the potential of seagrass as a model ecosystem. More generally, this study provides a rare opportunity to test some of the predictions of ecological theory in a natural ecosystem of global conservation and economic value.

Power spectra comparison between GOLF and spatially masked MDI velocity signals

NASA Astrophysics Data System (ADS)

Henney, C. J.; Ulrich, R. K.; Bertello, L.; Bogart, R. S.; Bush, R. I.; Scherrer, P. H.; Cortés, T. Roca; Turck-Chièze, S.

1999-08-01

The Global Oscillations at Low Frequency (GOLF) and the Michelson Doppler Imager (MDI) instruments aboard the Solar and Heliospheric Observatory (SOHO) give an excellent opportunity to search for solar low frequency oscillation modes previously undetected from ground based experiments. Presented here is a comparison of the velocity power spectra between the two instruments. In addition, this paper outlines work towards creating a GOLF-simulated signal utilizing MDI velocity images. The simulation of the GOLF signal is achieved by integrating spatially weighted masks with MDI full-disk Doppler images. The GOLF-simulated signal and a selection of additional spatially masked MDI velocity signals are compared with the observed GOLF signal for a 759 day period from May 25, 1996 through June 22, 1998. Ultimately, a cross-analysis process between GOLF and MDI signals could lead to an enhancement of our ability to detect low frequency solar oscillations. For low degree (l<= 3) and low frequency acoustic modes, the signal-to-background ratio between GOLF and the spatially masked MDI velocity data is compared here.

Centers of excellence in healthcare institutions: what they are and how to assemble them.

PubMed

Elrod, James K; Fortenberry, John L

2017-07-11

Centers of excellence-specialized programs within healthcare institutions which supply exceptionally high concentrations of expertise and related resources centered on particular medical areas and delivered in a comprehensive, interdisciplinary fashion-afford many advantages for healthcare providers and the populations they serve. To achieve full value from centers of excellence, proper assembly is an absolute necessity, but guidance is somewhat limited. This effectively forces healthcare providers to pursue establishment largely via trial-and-error, diminishing opportunities for success. Successful development of a center of excellence first requires the acquisition of a detailed understanding of the delivery model and its benefits. Then, concerted actions must be taken on a particular series of administrative and clinical fronts, treating them in prescribed manners to afford synergies which yield an exceptionally high level of care. To reduce hardships associated with acquiring this rather elusive knowledge, remedy shortcomings in the literature, and potentially bolster community health broadly, this article presents information and insights gleaned from Willis-Knighton Health System's extensive experience assembling and operating centers of excellence. This work is intended to educate and enlighten, but most importantly, supply guidance which will permit healthcare establishments to replicate noted processes to realize their own centers of excellence. Centers of excellence have the ability to dramatically enhance the depth and breadth of healthcare services available in communities. Given the numerous mutual benefits afforded by this delivery model, it is hoped that the light shed by this article will help healthcare providers better understand centers of excellence and be more capable and confident in associated development initiatives, affording greater opportunities for themselves and their patient populations.

WASP (Write a Scientific Paper) using Excel - 7: The t-distribution.

PubMed

Grech, Victor

2018-03-01

The calculation of descriptive statistics after data collection provides researchers with an overview of the shape and nature of their datasets, along with basic descriptors, and may help identify true or incorrect outlier values. This exercise should always precede inferential statistics, when possible. This paper provides some pointers for doing so in Microsoft Excel, both statically and dynamically, with Excel's functions, including the calculation of standard deviation and variance and the relevance of the t-distribution. Copyright © 2018 Elsevier B.V. All rights reserved.

Electrical Resistivity Imaging of Saltwater and Freshwater Along the Coast of Monterey Bay

NASA Astrophysics Data System (ADS)

Knight, R. J.; Pidlisecky, A.; Moran, T.; Goebel, M.

2014-12-01

A coastal region represents a dynamic interface where the processes of saltwater intrusion and freshwater flow create complex spatial and temporal changes in water chemistry. These changes in water chemistry affect both human use of coastal groundwater aquifers and the functioning of coastal ecosystems. Mapping out the subsurface distribution of saltwater and freshwater is a critical step in predicting, and managing, changes in water chemistry in coastal regions. Our research is focused on California's Monterey Bay region where agriculturally-intensive land meets the sensitive marine environment of the Monterey Bay National Marine Sanctuary. Along the coast of Monterey Bay extensive groundwater extraction (groundwater provides more than 80% of the area's water supply) has led to saltwater intrusion into aquifers at various locations. To date, the mapping of saltwater intrusion has relied on measurements of changing water chemistry in monitoring wells. But it is challenging with wells to capture the spatially complex hydrostratigraphy resulting from changing depositional environments and numerous faulting events. We suggest that geophysical methods be used to map and monitor the distribution of saltwater and freshwater by acquiring non-invasive, high-resolution continuous images of the subsurface. In a pilot study conducted over the past four years, we used electrical resistivity imaging to successfully identify regions of saltwater and freshwater 150 m below sea level along a 7 km stretch of the southern Monterey Bay coast. We employed large-offset electrical resistance tomography using a 96-electrode system with an overall array length of 860 m. The results showed excellent agreement with measurements in nearby monitoring wells. The large-scale image provided by the geophysical measurements revealed the hydrostratigraphic controls on the spatial distribution of the saltwater/freshwater interface. In October 2014 we will expand this study, using large-offset electrical resistance tomography to image to a depth of 300 m along a 40 km stretch of the Monterey Bay coast. The acquisition of this continuous dataset will provide an improved understanding of the biophysical and human factors controlling the processes of saltwater intrusion and freshwater flow in this coastal region.

A Vision of Excellence. The National Search for Excellence Awards in Rehabilitation

ERIC Educational Resources Information Center

J.M. Foundation, New York, NY.

This publication provides information on 1989 winners of the Search for Excellence award for outstanding vocational service programs for people with disabilities. A history and description of the search appears first. A winner and two finalists are described in each of four categories. An introduction to each category discusses typical applicant…

Improving the Teaching of Microsoft Excel: Traditional Book versus Online Platform

ERIC Educational Resources Information Center

Brooks, Stoney; Taylor, Joseph

2016-01-01

The authors explore the differences between traditional, book-based methods of teaching Excel and online, platform-supported methods by comparing teaching students in different locations, with and without online support. As Excel is a critical skill for business majors, the authors investigate which methods and locations provide the highest…

Using Microsoft Excel to Generate Usage Statistics

ERIC Educational Resources Information Center

Spellman, Rosemary

2011-01-01

At the Libraries Service Center, statistics are generated on a monthly, quarterly, and yearly basis by using four Microsoft Excel workbooks. These statistics provide information about what materials are being requested and by whom. They also give details about why certain requests may not have been filled. Utilizing Excel allows for a shallower…

Excellence in Television for Young Children--Entertainment, Engagement and Empowerment

ERIC Educational Resources Information Center

Harrison, Cathie

2004-01-01

The notion of excellence in early childhood education is increasingly recognised as both subjective and problematic. The search for excellence can be, however, a motivating force for those committed to providing experiences that enrich and enhance the lives of young children within diverse Australian communities. This commitment is shared by the…

Landsat image data quality studies

NASA Technical Reports Server (NTRS)

Schueler, C. F.; Salomonson, V. V.

1985-01-01

Preliminary results of the Landsat-4 Image Data Quality Analysis (LIDQA) program to characterize the data obtained using the Thematic Mapper (TM) instrument on board the Landsat-4 and Landsat-5 satellites are reported. TM design specifications were compared to the obtained data with respect to four criteria, including spatial resolution; geometric fidelity; information content; and image relativity to Multispectral Scanner (MSS) data. The overall performance of the TM was rated excellent despite minor instabilities and radiometric anomalies in the data. Spatial performance of the TM exceeded design specifications in terms of both image sharpness and geometric accuracy, and the image utility of the TM data was at least twice as high as MSS data. The separability of alfalfa and sugar beet fields in a TM image is demonstrated.

Millimeter and hard x ray/gamma ray observations of solar flares during the June 1991 GRO campaign

NASA Technical Reports Server (NTRS)

Kundu, M. R.; White, S. M.; Gopalswamy, N.; Lim, J.

1992-01-01

We have carried out high-spatial-resolution millimeter observations of solar flares using the Berkeley-Illinois-Maryland Array (BIMA). At the present time, BIMA consists of only three elements, which is not adequate for mapping highly variable solar phenomena, but is excellent for studies of the temporal structure of flares at millimeter wavelengths at several different spatial scales. We present BIMA observations made during the Gamma Ray Observatories (GRO)/Solar Max 1991 campaign in Jun. 1991 when solar activity was unusually high. Our observations covered the period 8-9 Jun. 1991; this period overlapped the period 4-15 Jun. when the Compton Telescope made the Sun a target of opportunity because of the high level of solar activity.

High quality single shot ultrafast MeV electron diffraction from a photocathode radio-frequency gun

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fu, Feichao; Liu, Shengguang; Zhu, Pengfei

2014-08-15

A compact ultrafast electron diffractometer, consisting of an s-band 1.6 cell photocathode radio-frequency gun, a multi-function changeable sample chamber, and a sensitive relativistic electron detector, was built at Shanghai Jiao Tong University. High-quality single-shot transmission electron diffraction patterns have been recorded by scattering 2.5 MeV electrons off single crystalline gold and polycrystalline aluminum samples. The high quality diffraction pattern indicates an excellent spatial resolution, with the ratio of the diffraction ring radius over the ring rms width beyond 10. The electron pulse width is estimated to be about 300 fs. The high temporal and spatial resolution may open new opportunities inmore » various areas of sciences.« less

[Discussion on theory and indes system of Chinese material medical regionalization].

PubMed

Zhang, Xiaobo; Guo, Lanping; Zhou, Tao; Huang, Luqi

2010-09-01

The paper discusses the theory regarding to the Chinese material medical (CMM) regionalization. It is based on the studying of papers and practical experience in the field of CMM regionalization. The basic theories of CMM regionalization are laws of territorial differentiation and location theory. The basic principles are excellent quality of CMM, difference, similarity and practicability. The study objects are CMM resources, natural environment and social environment. The definition of CMM regionalization is that study on the laws of spatial pattern of resources and regional system in the field of CMM,then regionalize it based on this kind of spatial pattern and law. The index system is built based on the study of the theory,principle,object and index of CMM regionalization.

High quality single shot ultrafast MeV electron diffraction from a photocathode radio-frequency gun.

PubMed

Fu, Feichao; Liu, Shengguang; Zhu, Pengfei; Xiang, Dao; Zhang, Jie; Cao, Jianming

2014-08-01

A compact ultrafast electron diffractometer, consisting of an s-band 1.6 cell photocathode radio-frequency gun, a multi-function changeable sample chamber, and a sensitive relativistic electron detector, was built at Shanghai Jiao Tong University. High-quality single-shot transmission electron diffraction patterns have been recorded by scattering 2.5 MeV electrons off single crystalline gold and polycrystalline aluminum samples. The high quality diffraction pattern indicates an excellent spatial resolution, with the ratio of the diffraction ring radius over the ring rms width beyond 10. The electron pulse width is estimated to be about 300 fs. The high temporal and spatial resolution may open new opportunities in various areas of sciences.

An integrated assessment of climate change impacts for Athens- relevance to stakeholders and policy makers

NASA Astrophysics Data System (ADS)

Giannakopoulos, C.; Hatzaki, M.; Kostopoulou, E.; Varotsos, K.

2010-09-01

Analysing climate change and its impact needs a production of relevant elements for policy making that can be very different from the parameters considered by climate experts. In the framework of EU project CIRCE, a more realistic approach to match stakeholders and policy-makers demands is attempted. For this reason, within CIRCE selected case studies have been chosen that will provide assessments that can be integrated in practical decision making. In this work, an integrated assessment of climate change impacts on several sectors for the urban site of Athens in Greece is presented. The Athens urban case study has been chosen since it provides excellent opportunities for using an integrated approach across multiple temporal and spatial scales and sectors. In the spatial dimension, work extends from the inner city boundaries to the surrounding mountains and forests. In the temporal dimension, research ranges from the current observed time period (using available meteorological and sector data) to future time periods using data from several climate change projections. In addition, a multi-sector approach to climate change impacts is adopted. Impacts sectors covered range from direct climate impacts on natural ecosystems (such as flash floods, air pollution and forest fire risk) to indirect impacts resulting from combined climate-social-economic linkages (such as energy demand, tourism and health). Discussion of impact sector risks and adaptation measures are also exploited. Case-study work on impact sector risk to climate change is of particular interest to relevant policy makers and stakeholders, communication with who is ensured through a series of briefing notes and information sheets and through regional workshops.

Thermal hyperspectral chemical imaging

NASA Astrophysics Data System (ADS)

Holma, Hannu; Hyvärinen, Timo; Mattila, Antti-Jussi; Kormano, Ilkka

2012-06-01

Several chemical compounds have their strongest spectral signatures in the thermal region. This paper presents three push-broom thermal hyperspectral imagers. The first operates in MWIR (2.8-5 μm) with 35 nm spectral resolution. It consists of uncooled imaging spectrograph and cryogenically cooled InSb camera, with spatial resolution of 320/640 pixels and image rate to 400 Hz. The second imager covers LWIR in 7.6-12 μm with 32 spectral bands. It employs an uncooled microbolometer array and spectrograph. These imagers have been designed for chemical mapping in reflection mode in industry and laboratory. An efficient line-illumination source has been developed, and it makes possible thermal hyperspectral imaging in reflection with much higher signal and SNR than is obtained from room temperature emission. Application demonstrations including sorting of dark plastics and mineralogical mapping of drill cores are presented. The third imager utilizes a cryo-cooled MCT array with precisely temperature stabilized optics. The optics is not cooled, but instrument radiation is suppressed by special filtering and corrected by BMC (Background-Monitoring-on-Chip) method. The approach provides excellent sensitivity in an instrument which is portable and compact enough for installation in UAVs. The imager has been verified in 7.6 to 12.3 μm to provide NESR of 18 mW/(m2 sr μm) at 10 μm for 300 K target with 100 spectral bands and 384 spatial samples. It results in SNR of higher than 500. The performance makes possible various applications from gas detection to mineral exploration and vegetation surveys. Results from outdoor and airborne experiments are shown.

Q-3D: Imaging Spectroscopy of Quasar Hosts with JWST Analyzed with a Powerful New PSF Decomposition and Spectral Analysis Package

NASA Astrophysics Data System (ADS)

Wylezalek, Dominika; Veilleux, Sylvain; Zakamska, Nadia; Barrera-Ballesteros, J.; Luetzgendorf, N.; Nesvadba, N.; Rupke, D.; Sun, A.

2017-11-01

In the last few years, optical and near-IR IFU observations from the ground have revolutionized extragalactic astronomy. The unprecedented infrared sensitivity, spatial resolution, and spectral coverage of the JWST IFUs will ensure high demand from the community. For a wide range of extragalactic phenomena (e.g. quasars, starbursts, supernovae, gamma ray bursts, tidal disruption events) and beyond (e.g. nebulae, debris disks around bright stars), PSF contamination will be an issue when studying the underlying extended emission. We propose to provide the community with a PSF decomposition and spectral analysis package for high dynamic range JWST IFU observations allowing the user to create science-ready maps of relevant spectral features. Luminous quasars, with their bright central source (quasar) and extended emission (host galaxy), are excellent test cases for this software. Quasars are also of high scientific interest in their own right as they are widely considered to be the main driver in regulating massive galaxy growth. JWST will revolutionize our understanding of black hole-galaxy co-evolution by allowing us to probe the stellar, gas, and dust components of nearby and distant galaxies, spatially and spectrally. We propose to use the IFU capabilities of NIRSpec and MIRI to study the impact of three carefully selected luminous quasars on their hosts. Our program will provide (1) a scientific dataset of broad interest that will serve as a pathfinder for JWST science investigations in IFU mode and (2) a powerful new data analysis tool that will enable frontier science for a wide swath of astrophysical research.

Pansharpening in coastal ecosystems using Worldview-2 imagery

NASA Astrophysics Data System (ADS)

Ibarrola-Ulzurrun, Edurne; Marcello-Ruiz, Javier; Gonzalo-Martin, Consuelo

2016-10-01

Both climate change and anthropogenic pressure impacts are producing a declining in ecosystem natural resources. In this work, a vulnerable coastal ecosystem, Maspalomas Natural Reserve (Canary Islands, Spain), is analyzed. The development of advanced image processing techniques, applied to new satellites with very high resolution sensors (VHR), are essential to obtain accurate and systematic information about such natural areas. Thus, remote sensing offers a practical and cost-effective means for a good environmental management although some improvements are needed by the application of pansharpening techniques. A preliminary assessment was performed selecting classical and new algorithms that could achieve good performance with WorldView-2 imagery. Moreover, different quality indices were used in order to asses which pansharpening technique gives a better fused image. A total of 7 pansharpening algorithms were analyzed using 6 spectral and spatial quality indices. The quality assessment was implemented for the whole set of multispectral bands and for those bands covered by the wavelength range of the panchromatic image and outside of it. After an extensive evaluation, the most suitable algorithm was the Weighted Wavelet `à trous' through Fractal Dimension Maps technique which provided the best compromise between the spectral and spatial quality for the image. Finally, Quality Map Analysis was performed in order to study the fusion in each band at local level. As conclusion, novel analysis has been conducted covering the evaluation of fusion methods in shallow water areas. Hence, the excellent results provided by this study have been applied to the generation of challenging thematic maps of coastal and dunes protected areas.

Experimental investigation of the transverse modal instabilities onset in high power fully-aperiodic-large-pitch fiber lasers

NASA Astrophysics Data System (ADS)

Malleville, Marie-Alicia; Benoît, Aurélien; Dauliat, Romain; Leconte, Baptiste; Darwich, Dia; du Jeu, Rémi; Jamier, Raphaël.; Schwuchow, Anka; Schuster, Kay; Roy, Philippe

2018-02-01

Over the last decade, significant work has been carried out in order to increase the energy/peak power provided by fiber lasers. Indeed, new microstructured fibers with large (or very large) mode area cores (LMA) such as Distributed Mode Filtering (DMF) fibers and Large-Pitch Fibers (LPF) have been developed to address this concern. These technologies have allowed diffraction-limited emission with core diameters higher than 80 μm, and have state-of-the-art performances in terms of pulse energy or peak power while keeping an excellent spatial beam quality. Although these fibers were designed to reach high power levels while maintaining a single transverse mode propagation, power scaling becomes quickly limited by the onset of transverse modal instabilities (TMI). This effect suddenly arises when a certain average power threshold is exceeded, drastically degrading the emitted beam quality. In this work, we investigate the influence of the core dimensions and the refractive index mismatch between the active core and the background cladding material, on the TMI power threshold in rod-type Fully-Aperiodic-LPF. This fiber structure was specifically designed to enhance the higher-order modes (HOMs) delocalization out of the gain region and thus push further the onset of modal instabilities. Using a 400W pump diode at 976 nm, the power scaling, as well as the spatial beam quality and its temporal behavior were investigated in laser configuration, which theoretically provides a lower TMI power threshold than the amplifier one due to the lack of selective excitation of the fundamental mode.

Accuracy and Reliability of the Kinect Version 2 for Clinical Measurement of Motor Function

PubMed Central

Kayser, Bastian; Mansow-Model, Sebastian; Verrel, Julius; Paul, Friedemann; Brandt, Alexander U.; Schmitz-Hübsch, Tanja

2016-01-01

Background The introduction of low cost optical 3D motion tracking sensors provides new options for effective quantification of motor dysfunction. Objective The present study aimed to evaluate the Kinect V2 sensor against a gold standard motion capture system with respect to accuracy of tracked landmark movements and accuracy and repeatability of derived clinical parameters. Methods Nineteen healthy subjects were concurrently recorded with a Kinect V2 sensor and an optical motion tracking system (Vicon). Six different movement tasks were recorded with 3D full-body kinematics from both systems. Tasks included walking in different conditions, balance and adaptive postural control. After temporal and spatial alignment, agreement of movements signals was described by Pearson’s correlation coefficient and signal to noise ratios per dimension. From these movement signals, 45 clinical parameters were calculated, including ranges of motions, torso sway, movement velocities and cadence. Accuracy of parameters was described as absolute agreement, consistency agreement and limits of agreement. Intra-session reliability of 3 to 5 measurement repetitions was described as repeatability coefficient and standard error of measurement for each system. Results Accuracy of Kinect V2 landmark movements was moderate to excellent and depended on movement dimension, landmark location and performed task. Signal to noise ratio provided information about Kinect V2 landmark stability and indicated larger noise behaviour in feet and ankles. Most of the derived clinical parameters showed good to excellent absolute agreement (30 parameters showed ICC(3,1) > 0.7) and consistency (38 parameters showed r > 0.7) between both systems. Conclusion Given that this system is low-cost, portable and does not require any sensors to be attached to the body, it could provide numerous advantages when compared to established marker- or wearable sensor based system. The Kinect V2 has the potential to be used as a reliable and valid clinical measurement tool. PMID:27861541

Using Academy Standards of Excellence in Nutrition and Dietetics for organization self-assessment and quality improvement.

PubMed

Price, Joyce A; Kent, Sue; Cox, Sharon A; McCauley, Sharon M; Parekh, Janki; Klein, Catherine J

2014-08-01

Standards of Excellence in Nutrition and Dietetics for an Organization is a self-assessment tool to measure and evaluate an organization's program, services, and initiatives that identify and distinguish the Registered Dietitian Nutritionist (RDN) brand as the professional expert in food and nutrition. The Standards of Excellence will serve as a road map to recognize RDNs as leaders and collaborators. Standards of Excellence criteria apply to all practice segments of nutrition and dietetics: health care, education and research, business and industry, and community nutrition and public health. Given the membership's call to action to be recognized for their professional expertise, the Academy of Nutrition and Dietetics Quality Management Committee developed four Standards of Excellence in Nutrition and Dietetics for Organizations: Quality of Leadership, Quality of Organization, Quality of Practice, and Quality of Outcomes. Within each standard, specific indicators provide strategies for an organization to demonstrate excellence. The Academy will develop a self-evaluation scoring tool to assist the organization in applying and implementing one or more of the strategies in the Standards of Excellence indicators. The organization can use the self-assessment tool to establish itself as a Center of Excellence in Nutrition and Dietetics. The role examples illustrate initiatives RDNs and organizations can take to identify themselves as a Center of Excellence in Nutrition and Dietetics. Achieving the Excellence level is an important collaborative initiative between nutrition and dietetics organizations and the Academy to provide increased autonomy, supportive management, respect within peers and community, opportunities for professional development, support for further education, and compensation for the RDN. For purposes of the Standards, "organization" means workplace or practice setting. Copyright © 2014 Academy of Nutrition and Dietetics. Published by Elsevier Inc. All rights reserved.

Neutron and gamma-ray energy reconstruction for characterization of special nuclear material

DOE PAGES

Clarke, Shaun D.; Hamel, Michael C.; Di fulvio, Angela; ...

2017-06-30

Characterization of special nuclear material may be performed using energy spectroscopy of either the neutron or gamma-ray emissions from the sample. Gamma-ray spectroscopy can be performed relatively easily using high-resolution semiconductors such as high-purity germanium. Neutron spectroscopy, by contrast, is a complex inverse problem. Here, results are presented for 252Cf and PuBe energy spectra unfolded using a single EJ309 organic scintillator; excellent agreement is observed with the reference spectra. Neutron energy spectroscopy is also possible using a two-plane detector array, whereby time-offlight kinematics can be used. With this system, energy spectra can also be obtained as a function of position.more » Finally, spatial-dependent energy spectra are presented for neutron and gamma-ray sources that are in excellent agreement with expectations.« less

Neutron and gamma-ray energy reconstruction for characterization of special nuclear material

DOE Office of Scientific and Technical Information (OSTI.GOV)

Clarke, Shaun D.; Hamel, Michael C.; Di fulvio, Angela

Characterization of special nuclear material may be performed using energy spectroscopy of either the neutron or gamma-ray emissions from the sample. Gamma-ray spectroscopy can be performed relatively easily using high-resolution semiconductors such as high-purity germanium. Neutron spectroscopy, by contrast, is a complex inverse problem. Here, results are presented for 252Cf and PuBe energy spectra unfolded using a single EJ309 organic scintillator; excellent agreement is observed with the reference spectra. Neutron energy spectroscopy is also possible using a two-plane detector array, whereby time-offlight kinematics can be used. With this system, energy spectra can also be obtained as a function of position.more » Finally, spatial-dependent energy spectra are presented for neutron and gamma-ray sources that are in excellent agreement with expectations.« less

Environmental statistics with S-Plus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Millard, S.P.; Neerchal, N.K.

1999-12-01

The combination of easy-to-use software with easy access to a description of the statistical methods (definitions, concepts, etc.) makes this book an excellent resource. One of the major features of this book is the inclusion of general information on environmental statistical methods and examples of how to implement these methods using the statistical software package S-Plus and the add-in modules Environmental-Stats for S-Plus, S+SpatialStats, and S-Plus for ArcView.

76 FR 72452 - International Mail Contract

Federal Register 2010, 2011, 2012, 2013, 2014

2011-11-23

... Excel file. In Order No. 549, the Commission approved the Inbound Market Dominant Multi-Service... 2012 Agreement is provided in the Excel file included with its filing. It contends that improvements...

A Microsoft Excel® 2010 Based Tool for Calculating Interobserver Agreement

PubMed Central

Azulay, Richard L

2011-01-01

This technical report provides detailed information on the rationale for using a common computer spreadsheet program (Microsoft Excel®) to calculate various forms of interobserver agreement for both continuous and discontinuous data sets. In addition, we provide a brief tutorial on how to use an Excel spreadsheet to automatically compute traditional total count, partial agreement-within-intervals, exact agreement, trial-by-trial, interval-by-interval, scored-interval, unscored-interval, total duration, and mean duration-per-interval interobserver agreement algorithms. We conclude with a discussion of how practitioners may integrate this tool into their clinical work. PMID:22649578

A microsoft excel(®) 2010 based tool for calculating interobserver agreement.

PubMed

Reed, Derek D; Azulay, Richard L

2011-01-01

This technical report provides detailed information on the rationale for using a common computer spreadsheet program (Microsoft Excel(®)) to calculate various forms of interobserver agreement for both continuous and discontinuous data sets. In addition, we provide a brief tutorial on how to use an Excel spreadsheet to automatically compute traditional total count, partial agreement-within-intervals, exact agreement, trial-by-trial, interval-by-interval, scored-interval, unscored-interval, total duration, and mean duration-per-interval interobserver agreement algorithms. We conclude with a discussion of how practitioners may integrate this tool into their clinical work.

The pivotal role of nurse managers, leaders and educators in enabling excellence in nursing care.

PubMed

McSherry, Robert; Pearce, Paddy; Grimwood, Karen; McSherry, Wilfred

2012-01-01

The aims of this paper are to present the findings from a discursive analysis of key issues associated with providing excellence in nursing care; and to provide an exemplar framework to support excellence in nursing care and describe the potential benefits when excellence in nursing care occurs. The challenge facing the nursing profession is in ensuring that the core principles of dignity, respect, compassion and person (people) centered care become central to all aspects of nursing practice. To regain the public and professional confidence in nursing, nurse leaders, managers and educators play a pivotal role in improving the image of nursing. Excellence in nursing care will only happen by ensuring that nurse managers, leaders and educators are able to respond to the complexity of reform and change by leading, managing, enabling, empowering, encouraging and resourcing staff to be innovative and entrepreneurial in practice. Creating healthcare environments that enable excellence in nursing care will not occur without the development of genuine shared working partnerships and collaborations between nurse managers, leaders and educators and their associated organizations. The importance of adopting an authentic sustainable leadership approach to facilitating and supporting frontline staff to innovate and change is imperative in restoring and evidencing that nurses do care and are excellent at what they do. By focusing attention on what resources are required to create a healthcare environment that enables compassion, safety and excellence in nursing care and what this means would be a reasonable start on the journey to excellence in nursing. © 2012 Blackwell Publishing Ltd.

Best Practices in Digital Object Development for Education: Promoting Excellence and Innovation in Instructional Quality and Assessment

ERIC Educational Resources Information Center

Reece, Amanda A.

2016-01-01

A program of development of online learning resources should provide content, resources, support and activities to promote excellence and innovation in instructional quality and assessment. This article provides details on five best practices in digital object development for teaching and learning. In addition, an evaluation of the learning object…

Teaching excellence in nursing education: a caring framework.

PubMed

Sawatzky, Jo-Ann V; Enns, Carol L; Ashcroft, Terri J; Davis, Penny L; Harder, B Nicole

2009-01-01

Nursing education plays a central role in the ability to practice effectively. It follows that an optimally educated nursing workforce begets optimal patient care. A framework for excellence in nursing education could guide the development of novice educators, establish the basis for evaluating teaching excellence, and provide the impetus for research in this area. However, a review of the social sciences and nursing literature as well as a search for existing models for teaching excellence revealed an apparent dearth of evidence specific to excellence in nursing education. Therefore, we developed the Caring Framework for Excellence in Nursing Education. This framework evolved from a review of the generic constructs that exemplify teaching excellence: excellence in teaching practice, teaching scholarship, and teaching leadership. Nursing is grounded in the ethic of caring. Hence, caring establishes the foundation for this uniquely nursing framework. Because a teaching philosophy is intimately intertwined with one's nursing philosophy and the ethic of caring, it is also fundamental to the caring framework. Ideally, this framework will contribute to excellence in nursing education and as a consequence excellence in nursing practice and optimal patient care.

Jackson State University's Center for Spatial Data Research and Applications: New facilities and new paradigms

NASA Technical Reports Server (NTRS)

Davis, Bruce E.; Elliot, Gregory

1989-01-01

Jackson State University recently established the Center for Spatial Data Research and Applications, a Geographical Information System (GIS) and remote sensing laboratory. Taking advantage of new technologies and new directions in the spatial (geographic) sciences, JSU is building a Center of Excellence in Spatial Data Management. New opportunities for research, applications, and employment are emerging. GIS requires fundamental shifts and new demands in traditional computer science and geographic training. The Center is not merely another computer lab but is one setting the pace in a new applied frontier. GIS and its associated technologies are discussed. The Center's facilities are described. An ARC/INFO GIS runs on a Vax mainframe, with numerous workstations. Image processing packages include ELAS, LIPS, VICAR, and ERDAS. A host of hardware and software peripheral are used in support. Numerous projects are underway, such as the construction of a Gulf of Mexico environmental data base, development of AI in image processing, a land use dynamics study of metropolitan Jackson, and others. A new academic interdisciplinary program in Spatial Data Management is under development, combining courses in Geography and Computer Science. The broad range of JSU's GIS and remote sensing activities is addressed. The impacts on changing paradigms in the university and in the professional world conclude the discussion.

Systems and methods for knowledge discovery in spatial data

DOEpatents

Obradovic, Zoran; Fiez, Timothy E.; Vucetic, Slobodan; Lazarevic, Aleksandar; Pokrajac, Dragoljub; Hoskinson, Reed L.

2005-03-08

Systems and methods are provided for knowledge discovery in spatial data as well as to systems and methods for optimizing recipes used in spatial environments such as may be found in precision agriculture. A spatial data analysis and modeling module is provided which allows users to interactively and flexibly analyze and mine spatial data. The spatial data analysis and modeling module applies spatial data mining algorithms through a number of steps. The data loading and generation module obtains or generates spatial data and allows for basic partitioning. The inspection module provides basic statistical analysis. The preprocessing module smoothes and cleans the data and allows for basic manipulation of the data. The partitioning module provides for more advanced data partitioning. The prediction module applies regression and classification algorithms on the spatial data. The integration module enhances prediction methods by combining and integrating models. The recommendation module provides the user with site-specific recommendations as to how to optimize a recipe for a spatial environment such as a fertilizer recipe for an agricultural field.

Influence of Pre-Training Predator Stress on the Expression of c-fos mRNA in the Hippocampus, Amygdala, and Striatum Following Long-Term Spatial Memory Retrieval

PubMed Central

VanElzakker, Michael B.; Zoladz, Phillip R.; Thompson, Vanessa M.; Park, Collin R.; Halonen, Joshua D.; Spencer, Robert L.; Diamond, David M.

2011-01-01

We have studied the influence of pre-training psychological stress on the expression of c-fos mRNA following long-term spatial memory retrieval. Rats were trained to learn the location of a hidden escape platform in the radial-arm water maze, and then their memory for the platform location was assessed 24 h later. Rat brains were extracted 30 min after the 24-h memory test trial for analysis of c-fos mRNA. Four groups were tested: (1) Rats given standard training (Standard); (2) Rats given cat exposure (Predator Stress) 30 min prior to training (Pre-Training Stress); (3) Rats given water exposure only (Water Yoked); and (4) Rats given no water exposure (Home Cage). The Standard trained group exhibited excellent 24 h memory which was accompanied by increased c-fos mRNA in the dorsal hippocampus and basolateral amygdala (BLA). The Water Yoked group exhibited no increase in c-fos mRNA in any brain region. Rats in the Pre-Training Stress group were classified into two subgroups: good and bad memory performers. Neither of the two Pre-Training Stress subgroups exhibited a significant change in c-fos mRNA expression in the dorsal hippocampus or BLA. Instead, stressed rats with good memory exhibited significantly greater c-fos mRNA expression in the dorsolateral striatum (DLS) compared to stressed rats with bad memory. This finding suggests that stressed rats with good memory used their DLS to generate a non-spatial (cue-based) strategy to learn and subsequently retrieve the memory of the platform location. Collectively, these findings provide evidence at a molecular level for the involvement of the hippocampus and BLA in the retrieval of spatial memory and contribute novel observations on the influence of pre-training stress in activating the DLS in response to long-term memory retrieval. PMID:21738501

The spatial and seasonal variability of the groundwater chemistry and quality in the exploited aquifer in the Daxing District, Beijing, China.

PubMed

Zhai, Yuanzheng; Lei, Yan; Zhou, Jun; Li, Muzi; Wang, Jinsheng; Teng, Yanguo

2015-02-01

The aquifer in the Beijing Plain is intensively used as a primary source to meet the growing needs of the various sectors (drinking, agricultural, and industrial purposes). The analysis of groundwater chemical characteristics provides much important information useful in water resources management. To characterize the groundwater chemistry, reveal its spatial and seasonal variability, and determine its quality suitability for domestic and agricultural uses, a total of 200 groundwater samples were collected in June and October 2012 from 100 exploited wells in Daxing District, Beijing, China. All of the indices (39 items) listed in the Quality Standard for Groundwater of China (QSGC) as well as eight additional common parameters were tested and analyzed for all samples, based on which research target was achieved. The seasonal effect on the groundwater chemistry and quality was very slight, whereas the spatial changes were very obvious. The aquifer is mainly dominated by HCO3-Ca·Mg-type water. Of the 39 quality indices listed in QSGC, 28 indices of all of the samples for the 2 months can be classified into the excellent level, whereas the remaining 11 indices can be classified into different levels with the total hardness, NO3, NO2, and Fe being the worst, mainly distributed in the residential and industrial land. According to the general quality index, the groundwater can be classified from good to a relatively poor level, mainly from southeast to northwest. Furthermore, the relatively poor-level area in the northwest expands to the southeast more than in the past years, to which people should pay attention because this reverse spatial distribution relative to the natural law indicates an obvious, anthropogenic impact on the groundwater. In addition, the groundwater in this area is generally very suitable for irrigation year-round. Nevertheless, we recommend performing agricultural water-saving measures for the sustainable development of water and urbanization, groundwater recovery, and ecological safety.

Rare-earth Nanoparticle-induced Cytotoxicity on Spatial Cognition Memory of Mouse Brain.

PubMed

Lin, Cai-Hou; Liu, Gui-Fen; Chen, Jing; Chen, Yan; Lin, Ru-Hui; He, Hong-Xing; Chen, Jian-Ping

2017-11-20

Luminescent rare-earth-based nanoparticles have been increasingly used in nanomedicine due to their excellent physicochemical properties, such as biomedical imaging agents, drug carriers, and biomarkers. However, biological safety of the rare-earth-based nanomedicine is of great significance for future development in practical applications. In particular, biological effects of rare-earth nanoparticles on human's central nervous system are still unclear. This study aimed to investigate the potential toxicity of rare-earth nanoparticles in nervous system function in the case of continuous exposure. Adult ICR mice were randomly divided into seven groups, including control group (receiving 0.9% normal saline) and six experimental groups (10 mice in each group). Luminescent rare-earth-based nanoparticles were synthesized by a reported co-precipitation method. Two different sizes of the nanoparticles were obtained, and then exposed to ICR mice through caudal vein injection at 0.5, 1.0, and 1.5 mg/kg body weight in each day for 7 days. Next, a Morris water maze test was employed to evaluate impaired behaviors of their spatial recognition memory. Finally, histopathological examination was implemented to study how the nanoparticles can affect the brain tissue of the ICR mice. Two different sizes of rare-earth nanoparticles have been successfully obtained, and their physical properties including luminescence spectra and nanoparticle sizes have been characterized. In these experiments, the rare-earth nanoparticles were taken up in the mouse liver using the magnetic resonance imaging characterization. Most importantly, the experimental results of the Morris water maze tests and histopathological analysis clearly showed that rare-earth nanoparticles could induce toxicity on mouse brain and impair the behaviors of spatial recognition memory. Finally, the mechanism of adenosine triphosphate quenching by the rare-earth nanoparticles was provided to illustrate the toxicity on the mouse brain. This study suggested that long-term exposure of high-dose bare rare-earth nanoparticles caused an obvious damage on the spatial recognition memory in the mice.

Zipf's law from scale-free geometry.

PubMed

Lin, Henry W; Loeb, Abraham

2016-03-01

The spatial distribution of people exhibits clustering across a wide range of scales, from household (∼10(-2) km) to continental (∼10(4) km) scales. Empirical data indicate simple power-law scalings for the size distribution of cities (known as Zipf's law) and the population density fluctuations as a function of scale. Using techniques from random field theory and statistical physics, we show that these power laws are fundamentally a consequence of the scale-free spatial clustering of human populations and the fact that humans inhabit a two-dimensional surface. In this sense, the symmetries of scale invariance in two spatial dimensions are intimately connected to urban sociology. We test our theory by empirically measuring the power spectrum of population density fluctuations and show that the logarithmic slope α=2.04 ± 0.09, in excellent agreement with our theoretical prediction α=2. The model enables the analytic computation of many new predictions by importing the mathematical formalism of random fields.

76 FR 66766 - New Postal Product

Federal Register 2010, 2011, 2012, 2013, 2014

2011-10-27

... supporting financial documentation as a separate Excel file. Australia Post Agreement. The Postal Service... of the Australia Post Agreement is provided in the Excel file included with the filing. Notice at 1-2...

How Statistics "Excel" Online.

ERIC Educational Resources Information Center

Chao, Faith; Davis, James

2000-01-01

Discusses the use of Microsoft Excel software and provides examples of its use in an online statistics course at Golden Gate University in the areas of randomness and probability, sampling distributions, confidence intervals, and regression analysis. (LRW)

Conjugated polymer and drug co-encapsulated nanoparticles for Chemo- and Photo-thermal Combination Therapy with two-photon regulated fast drug release

NASA Astrophysics Data System (ADS)

Yuan, Youyong; Wang, Zuyong; Cai, Pingqiang; Liu, Jie; Liao, Lun-De; Hong, Minghui; Chen, Xiaodong; Thakor, Nitish; Liu, Bin

2015-02-01

The spatial-temporal synchronization of photothermal therapy and chemotherapy is highly desirable for an efficient cancer treatment with synergistic effect. Herein, we developed a chemotherapeutic drug doxorubicin (DOX) and photothermal conjugated polymer (CP) co-loaded nanoplatform using a near-infrared (NIR) laser responsive amphiphilic brush copolymer as the encapsulation matrix. The obtained nanoparticles (NPs) exhibit good monodispersity and excellent stability, which can efficiently convert laser energy into thermal energy for photothermal therapy. Moreover, the hydrophobic polymer matrix bearing a number of 2-diazo-1,2-naphthoquinones (DNQ) moieties could be transformed to a hydrophilic one upon NIR two-photon laser irradiation, which leads to fast drug release. Furthermore, the surface modification of the NPs with cyclic arginine-glycine-aspartic acid (cRGD) tripeptide significantly enhances the accumulation of the NPs within integrin αvβ3 overexpressed cancer cells. The half-maximal inhibitory concentration (IC50) of the combination therapy is 13.7 μg mL-1, while the IC50 for chemotherapy and photothermal therapy alone is 147.8 μg mL-1 and 36.2 μg mL-1, respectively. The combination index (C.I.) is 0.48 (<1), which indicates the synergistic effect for chemotherapy and PTT. These findings provide an excellent NIR laser regulated nanoplatform for combined cancer treatment with synergistic effect due to the synchronous chemo- and photo-thermal therapy.

Development of the Fund for Excellence in the Teaching of Psychology

ERIC Educational Resources Information Center

Korn, James H.

2009-01-01

I review the development of the Fund for Excellence, which provides financial support for the Society for the Teaching of Psychology teaching awards. James McConnell provided funds in the early years of the awards before the Fund was established in 1987. I review the growth of the Fund and its administration by a Board of Directors, then make…

Anomalous origin of the right coronary artery evaluated with multidetector computed tomography and its clinical relevance.

PubMed

Hirono, Keiichi; Hata, Yukiko; Miyao, Naruaki; Nakaoka, Hideyuki; Saito, Kazuyoshi; Ibuki, Keijiro; Watanabe, Kazuhiro; Ozawa, Sayaka; Higuma, Tomonori; Yoshimura, Naoki; Nishida, Naoki; Ichida, Fukiko

2016-09-01

Anomalous origin of the right coronary artery (AORCA) is a rare congenital anomaly that may cause myocardial ischemia and sudden death. We reviewed the clinicopathological records of three cases of AORCA, and compared these with two cases of sudden cardiac death with AORCA revealed by autopsy. We report three juvenile cases with an AORCA originating above the commissural junction between the left and right aortic sinuses, with interarterial and intramural compression. They presented with exertional symptoms and were diagnosed with an AORCA by multidetector computed tomography (MDCT), which successfully delineated the spatial resolution of the anomalous origin and course of the right coronary artery (RCA), in the operating room. All three underwent successful surgical unroofing of the RCA. Two cases of sudden cardiac death with AORCA revealed by autopsy showed a slit-like orifice, acute-angled take-off, and long intramural course of the RCA, resembling the RCAs of three juvenile cases. It is crucial to be alert to the presentation of exertional symptoms, as sudden death may be the first manifestation of an anomalous coronary artery, such as those observed in these three cases. MDCT provided an excellent definition and spatial resolution of the unusual origin and intramural course of the RCA, facilitating the correct surgical remedy and resulting in a good outcome for the patients. Copyright © 2016 Japanese College of Cardiology. Published by Elsevier Ltd. All rights reserved.

Benthic Habitat Mapping Using Multispectral High-Resolution Imagery: Evaluation of Shallow Water Atmospheric Correction Techniques.

PubMed

Eugenio, Francisco; Marcello, Javier; Martin, Javier; Rodríguez-Esparragón, Dionisio

2017-11-16

Remote multispectral data can provide valuable information for monitoring coastal water ecosystems. Specifically, high-resolution satellite-based imaging systems, as WorldView-2 (WV-2), can generate information at spatial scales needed to implement conservation actions for protected littoral zones. However, coastal water-leaving radiance arriving at the space-based sensor is often small as compared to reflected radiance. In this work, complex approaches, which usually use an accurate radiative transfer code to correct the atmospheric effects, such as FLAASH, ATCOR and 6S, have been implemented for high-resolution imagery. They have been assessed in real scenarios using field spectroradiometer data. In this context, the three approaches have achieved excellent results and a slightly superior performance of 6S model-based algorithm has been observed. Finally, for the mapping of benthic habitats in shallow-waters marine protected environments, a relevant application of the proposed atmospheric correction combined with an automatic deglinting procedure is presented. This approach is based on the integration of a linear mixing model of benthic classes within the radiative transfer model of the water. The complete methodology has been applied to selected ecosystems in the Canary Islands (Spain) but the obtained results allow the robust mapping of the spatial distribution and density of seagrass in coastal waters and the analysis of multitemporal variations related to the human activity and climate change in littoral zones.

Influence of aeolian activities on the distribution of microbial abundance in glacier ice

NASA Astrophysics Data System (ADS)

Chen, Y.; Li, X.-K.; Si, J.; Wu, G.-J.; Tian, L.-D.; Xiang, S.-R.

2014-10-01

Microorganisms are continuously blown onto the glacier snow, and thus the glacial depth profiles provide excellent archives of microbial communities and climatic and environmental changes. However, it is uncertain about how aeolian processes that cause climatic changes control the distribution of microorganisms in the glacier ice. In the present study, microbial density, stable isotopic ratios, 18O / 16O in the precipitation, and mineral particle concentrations along the glacial depth profiles were collected from ice cores from the Muztag Ata glacier and the Dunde ice cap. The ice core data showed that microbial abundance was often, but not always associated with high concentrations of particles. Results also revealed clear seasonal patterning with high microbial abundance occurring in both the cooling autumn and warming spring-summer seasons. Microbial comparisons among the neighbouring glaciers display a heterogeneous spatial pattern, with the highest microbial cell density in the glaciers lying adjacent to the central Asian deserts and lowest microbial density in the southwestern margin of the Tibetan Plateau. In conclusion, microbial data of the glaciers indicates the aeolian deposits of microorganisms in the glacier ice and that the spatial patterns of microorgansisms are related to differences in sources of microbial flux and intensity of aeolian activities in the current regions. The results strongly support our hypothesis of aeolian activities being the main agents controlling microbial load in the glacier ice.

Investigation of water imbibition in porous stone by thermal neutron radiography

NASA Astrophysics Data System (ADS)

Hassanein, R.; Meyer, H. O.; Carminati, A.; Estermann, M.; Lehmann, E.; Vontobel, P.

2006-10-01

The understanding and modelling of the process of water imbibition is important for various applications of physics (e.g. building or soil physics). To measure the spatial distribution of the water content at arbitrary times is not trivial. Neutron radiography provides an appropriate tool for such investigations with excellent time and spatial resolution. Because of the high sensitivity to hydrogen, even small amounts of water in a porous structure can be detected in samples with dimensions up to 40 cm. Three different porous stones found in Indiana, USA, have been investigated (Mansfield sandstone, Salem limestone and Hindustan whetstone). The imbibition of deionized water and a NaCl solution in up- and downwards directions has been tracked during several hours and radiographed at regular intervals. A correction method to reduce the disturbing effects due to neutron scattering is applied. This allows a quantitative evaluation of the water content in addition to the visualization of the water distribution. The results agree well with theoretical models describing water infiltration and reproduce the water content with a pixel resolution of 272 µm in time steps of 1 min. The comparison with the radiographed structure of the dry stone explains variations in the conduction or retention of the water, respectively. The experimental and correction procedures described here can be applied to other porous media and their uptake and loss of fluids.

Multiscale 2D Inversions of Active-source First-arrival Times in Taiwan

NASA Astrophysics Data System (ADS)

Lin, Y. P.; Zhao, L.; Hung, S. H.

2015-12-01

In this study, we make use of the active-source records collected by the TAIGER (TAiwan Integrated GEodynamics Research) project in 2008 at nearly 1400 locations on the island of Taiwan and the surrounding ocean bottom. We manually picked the first-arrival times from the waveform records to obtain a set of highly accurate P-wave traveltimes. Among the 1400 receivers, more than 1000 were deployed along four almost linear cross-island profiles with inter-seismometer spacing down to 200 m. This ground-truth dataset provides strong constrains on the structure between the exactly known active sources and densely distributed receivers, which can be used to calibrate the seismic structure in the upper crust in Taiwan. In this study, we use this dataset to image the two-dimensional P-wave structure along the four linear profiles. A wavelet parameterization of the model is adopted to achieve an objective and data-adaptive multiscale resolution to the 2D structures. Rigorous estimations of resolution lengths were also conducted to quantify the spatial resolutions of the tomography inversions. The resulting 2D models yield first-arrival time predictions that are in excellent agreement with the observations. The seismic structures along the 2D profiles display strong lateral variations (up to 80% relative to regional average) with more realistic amplitudes of velocity perturbations and spatial patterns consistent with geological zonations of Taiwan

Benthic Habitat Mapping Using Multispectral High-Resolution Imagery: Evaluation of Shallow Water Atmospheric Correction Techniques

PubMed Central

Eugenio, Francisco; Marcello, Javier; Martin, Javier

2017-01-01

Remote multispectral data can provide valuable information for monitoring coastal water ecosystems. Specifically, high-resolution satellite-based imaging systems, as WorldView-2 (WV-2), can generate information at spatial scales needed to implement conservation actions for protected littoral zones. However, coastal water-leaving radiance arriving at the space-based sensor is often small as compared to reflected radiance. In this work, complex approaches, which usually use an accurate radiative transfer code to correct the atmospheric effects, such as FLAASH, ATCOR and 6S, have been implemented for high-resolution imagery. They have been assessed in real scenarios using field spectroradiometer data. In this context, the three approaches have achieved excellent results and a slightly superior performance of 6S model-based algorithm has been observed. Finally, for the mapping of benthic habitats in shallow-waters marine protected environments, a relevant application of the proposed atmospheric correction combined with an automatic deglinting procedure is presented. This approach is based on the integration of a linear mixing model of benthic classes within the radiative transfer model of the water. The complete methodology has been applied to selected ecosystems in the Canary Islands (Spain) but the obtained results allow the robust mapping of the spatial distribution and density of seagrass in coastal waters and the analysis of multitemporal variations related to the human activity and climate change in littoral zones. PMID:29144444

Characterization and identification of microorganisms by FT-IR microspectrometry

NASA Astrophysics Data System (ADS)

Ngo-Thi, N. A.; Kirschner, C.; Naumann, D.

2003-12-01

We report on a novel FT-IR approach for microbial characterization/identification based on a light microscope coupled to an infrared spectrometer which offers the possibility to acquire IR-spectra of microcolonies containing only few hundred cells. Microcolony samples suitable for FT-IR microspectroscopic measurements were obtained by a replica technique with a stamping device that transfers spatially accurate cells of microcolonies growing on solid culture plates to a special, IR-transparent or reflecting stamping plate. High quality spectra could be recorded either by applying the transmission/absorbance or the reflectance/absorbance mode of the infrared microscope. Signal to noise ratios higher than 1000 were obtained for microcolonies as small as 40 μm in diameter. Reproducibility levels were established that allowed species and strain identification. The differentiation and classification capacity of the FT-IR microscopic technique was tested for different selected microorganisms. Cluster and factor analysis methods were used to evaluate the complex spectral data. Excellent discrimination between bacteria and yeasts, and at the same time Gram-negative and Gram-positive bacterial strains was obtained. Twenty-two selected strains of different species within the genus Staphylococcus were repetitively measured and could be grouped into correct species cluster. Moreover, the results indicated that the method allows also identifications at the subspecies level. Additionally, the new approach allowed spectral mapping analysis of single colonies which provided spatially resolved characterization of growth heterogeneity within complex microbial populations such as colonies.

Steady incision of Grand Canyon at the million year timeframe: a case for mantle-driven differential uplift

USGS Publications Warehouse

Crow, Ryan S.; Karl Karlstrom,; Laura Crossey,; Richard Young,; Michael Ort,; Yemane Asmerom,; Victor Polyak,; Andrew Darling,

2014-01-01

The Grand Canyon region provides an excellent laboratory to examine the interplay between river incision, magmatism, and the geomorphic and tectonic processes that shape landscapes. Here we apply U-series, Ar–Ar, and cosmogenic burial dating of river terraces to examine spatial variations in incision rates along the 445 km length of the Colorado River through Grand Canyon. We also analyze strath terrace sequences that extend to heights of several hundred meters above the river, and integrate these with speleothem constrained maximum incision rates in several reaches to examine any temporal incision variations at the million-year time frame. This new high-resolution geochronology shows temporally steady long-term incision in any given reach of Grand Canyon but significant variations along its length from 160 m/Ma in the east to 101 m/Ma in the west. Spatial and temporal patterns of incision, and the long timescale of steady incision rule out models where geomorphic controls such as climate oscillations, bedrock strength, sediment load effects, or isostatic response to differential denudation are the first order drivers of canyon incision. The incision pattern is best explained by a model of Neogene and ongoing epeirogenic uplift due to an eastward propagating zone of increased upper mantle buoyancy that we infer from propagation of Neogene basaltic volcanism and a strong lateral gradient in modern upper mantle seismic structure.

Co-Registered In Situ Secondary Electron and Mass Spectral Imaging on the Helium Ion Microscope Demonstrated Using Lithium Titanate and Magnesium Oxide Nanoparticles.

PubMed

Dowsett, D; Wirtz, T

2017-09-05

The development of a high resolution elemental imaging platform combining coregistered secondary ion mass spectrometry and high resolution secondary electron imaging is reported. The basic instrument setup and operation are discussed and in situ image correlation is demonstrated on a lithium titanate and magnesium oxide nanoparticle mixture. The instrument uses both helium and neon ion beams generated by a gas field ion source to irradiate the sample. Both secondary electrons and secondary ions may be detected. Secondary ion mass spectrometry (SIMS) is performed using an in-house developed double focusing magnetic sector spectrometer with parallel detection. Spatial resolutions of 10 nm have been obtained in SIMS mode. Both the secondary electron and SIMS image data are very surface sensitive and have approximately the same information depth. While the spatial resolutions are approximately a factor of 10 different, switching between the different images modes may be done in situ and extremely rapidly, allowing for simple imaging of the same region of interest and excellent coregistration of data sets. The ability to correlate mass spectral images on the 10 nm scale with secondary electron images on the nanometer scale in situ has the potential to provide a step change in our understanding of nanoscale phenomena in fields from materials science to life science.

The 1.5 meter solar telescope GREGOR

NASA Astrophysics Data System (ADS)

Schmidt, W.; von der Lühe, O.; Volkmer, R.; Denker, C.; Solanki, S. K.; Balthasar, H.; Bello Gonzalez, N.; Berkefeld, Th.; Collados, M.; Fischer, A.; Halbgewachs, C.; Heidecke, F.; Hofmann, A.; Kneer, F.; Lagg, A.; Nicklas, H.; Popow, E.; Puschmann, K. G.; Schmidt, D.; Sigwarth, M.; Sobotka, M.; Soltau, D.; Staude, J.; Strassmeier, K. G.; Waldmann , T. A.

2012-11-01

The 1.5 m telescope GREGOR opens a new window to the understanding of solar small-scale magnetism. The first light instrumentation includes the Gregor Fabry Pérot Interferometer (GFPI), a filter spectro-polarimeter for the visible wavelength range, the GRating Infrared Spectro-polarimeter (GRIS) and the Broad-Band Imager (BBI). The excellent performance of the first two instruments has already been demonstrated at the Vacuum Tower Telescope. GREGOR is Europe's largest solar telescope and number 3 in the world. Its all-reflective Gregory design provides a large wavelength coverage from the near UV up to at least 5 microns. The field of view has a diameter of 150 arcsec. GREGOR is equipped with a high-order adaptive optics system, with a subaperture size of 10 cm, and a deformable mirror with 256 actuators. The science goals are focused on, but not limited to, solar magnetism. GREGOR allows us to measure the emergence and disappearance of magnetic flux at the solar surface at spatial scales well below 100 km. Thanks to its spectro-polarimetric capabilities, GREGOR will measure the interaction between the plasma flows, different kinds of waves, and the magnetic field. This will foster our understanding of the processes that heat the chromosphere and the outer layers of the solar atmosphere. Observations of the surface magnetic field at very small spatial scales will shed light on the variability of the solar brightness.

Application of water quality index to evaluate groundwater quality (temporal and spatial variation) of an intensively exploited aquifer (Puebla valley, Mexico).

PubMed

Salcedo-Sánchez, Edith R; Garrido Hoyos, Sofía E; Esteller Alberich, Ma Vicenta; Martínez Morales, Manuel

2016-10-01

The spatial and temporal variation of water quality in the urban area of the Puebla Valley aquifer was evaluated using historical and present data obtained during this investigation. The current study assessed water quality based on the Water Quality Index developed by the Canadian Council of Ministers of the Environment (CCME-WQI), which provides a mathematical framework to evaluate the quality of water in combination with a set of conditions representing quality criteria, or limits. This index is flexible regarding the type and number of variables used by the evaluation given that the variables of interest are selected according to the characteristics and objectives of development, conservation and compliance with regulations. The CCME-WQI was calculated using several variables that assess the main use of the wells in the urban area that is public supply, according to criteria for human use and consumption established by Mexican law and international standards proposed by the World Health Organization. The assessment of the index shows a gradual deterioration in the quality of the aquifer over time, as the amount of wells with excellent quality have decreased and those with lower index values (poor quality) have increased throughout the urban area of the Puebla Valley aquifer. The parameters affecting groundwater quality are: total dissolved solids, sulfate, calcium, magnesium and total hardness.

How restructuring river connectivity changes freshwater fish biodiversity and biogeography

USGS Publications Warehouse

Lynch, Heather L.; Grant, Evan H. Campbell; Muneepeerakul, Rachata; Arunachalam, Muthukumarasamy; Rodriguez-Iturbe, Ignacio; Fagan, William F.

2011-01-01

Interbasin water transfer projects, in which river connectivity is restructured via man-made canals, are an increasingly popular solution to address the spatial mismatch between supply and demand of fresh water. However, the ecological consequences of such restructuring remain largely unexplored, and there are no general theoretical guidelines from which to derive these expectations. River systems provide excellent opportunities to explore how network connectivity shapes habitat occupancy, community dynamics, and biogeographic patterns. We apply a neutral model (which assumes competitive equivalence among species within a stochastic framework) to an empirically derived river network to explore how proposed changes in network connectivity may impact patterns of freshwater fish biodiversity. Without predicting the responses of individual extant species, we find the addition of canals connecting hydrologically isolated river basins facilitates the spread of common species and increases average local species richness without changing the total species richness of the system. These impacts are sensitive to the parameters controlling the spatial scale of fish dispersal, with increased dispersal affording more opportunities for biotic restructuring at the community and landscape scales. Connections between isolated basins have a much larger effect on local species richness than those connecting reaches within a river basin, even when those within-basin reaches are far apart. As a result, interbasin canal projects have the potential for long-term impacts to continental-scale riverine communities.

Enhancing the revision of the static geological model of the Stuttgart Formation at the Ketzin pilot site by integration of reservoir simulations and 3D seismics

NASA Astrophysics Data System (ADS)

Kempka, Thomas; Norden, Ben; Ivanova, Alexandra; Lüth, Stefan

2017-04-01

Pilot-scale carbon dioxide storage has been performed at the Ketzin pilot site in Germany from June 2007 to August 2013 with about 67 kt of CO2 injected into the Upper Triassic Stuttgart Formation. In this context, the main aims focussed on verification of the technical feasibility of CO2 storage in saline aquifers and development of efficient strategies for CO2 behaviour monitoring and prediction. A static geological model has been already developed at an early stage of this undertaking, and continuously revised with the availability of additional geological and operational data as well as by means of reservoir simulations, allowing for revisions in line with the efforts to achieve a solid history match in view of well bottomhole pressures and CO2 arrival times at the observation wells. Three 3D seismic campaigns followed the 2005 3D seismic baseline in 2009, 2012 and 2015. Consequently, the interpreted seismic data on spatial CO2 thickness distributions in the storage reservoir as well as seismic CO2 detection limits from recent conformity studies enabled us to enhance the previous history-matching results by adding a spatial component to the previous observations, limited to points only. For that purpose, we employed the latest version of the history-matched static geological reservoir model and revised the gridding scheme of the reservoir simulation model by coarsening and introducing local grid refinements at the areas of interest. Further measures to ensure computational efficiency included the application of the MUFITS reservoir simulator (BLACKOIL module) with PVT data derived from the MUFITS GASSTORE module. Observations considered in the inverse model calibration for a simulation time of about 5 years included well bottomhole pressures, CO2 arrival times and seismically determined CO2 thickness maps for 2009 and 2012. Pilot points were employed by means of the PEST++ inverse simulation framework to apply permeability multipliers, interpolated by kriging to the reservoir simulation model grid. Our results exhibit an excellent well bottomhole pressure match, good agreement with the observed CO2 arrival times at the observation wells, a reasonable agreement of the spatial CO2 distribution with the CO2 thickness maps derived from the 2009, 2012 and 2015 3D seismic campaigns as well as a good agreement with hydraulic tests conducted before CO2 injection. Hence, the inversely determined permeability multipliers provide an excellent basis for further revision of the static geological model of the Stuttgart Formation.

Validation of TES ammonia observations at the single pixel scale in the San Joaquin Valley during DISCOVER-AQ

NASA Astrophysics Data System (ADS)

Sun, Kang; Cady-Pereira, Karen; Miller, David J.; Tao, Lei; Zondlo, Mark A.; Nowak, John B.; Neuman, J. A.; Mikoviny, Tomas; Müller, Markus; Wisthaler, Armin; Scarino, Amy J.; Hostetler, Chris A.

2015-05-01

Ammonia measurements from a vehicle-based, mobile open-path sensor and those from aircraft were compared with Tropospheric Emission Spectrometer (TES) NH3 columns at the pixel scale during the NASA Deriving Information on Surface conditions from Column and Vertically Resolved Observations Relevant to Air Quality field experiment. Spatial and temporal mismatches were reduced by having the mobile laboratory sample in the same areas as the TES footprints. To examine how large heterogeneities in the NH3 surface mixing ratios may affect validation, a detailed spatial survey was performed within a single TES footprint around the overpass time. The TES total NH3 column above a single footprint showed excellent agreement with the in situ total column constructed from surface measurements with a difference of 2% (within the combined measurement uncertainties). The comparison was then extended to a TES transect of nine footprints where aircraft data (5-80 ppbv) were available in a narrow spatiotemporal window (<10 km, <1 h). The TES total NH3 columns above the nine footprints agreed to within 6% of the in situ total columns derived from the aircraft-based measurements. Finally, to examine how TES captures surface spatial gradients at the interpixel scale, ground-based, mobile measurements were performed directly underneath a TES transect, covering nine footprints within ±1.5 h of the overpass. The TES total columns were strongly correlated (R2 = 0.82) with the median NH3 mixing ratios measured at the surface. These results provide the first in situ validation of the TES total NH3 column product, and the methodology is applicable to other satellite observations of short-lived species at the pixel scale.

Thinking about the thoughts of others; temporal and spatial neural activation during false belief reasoning.

PubMed

Mossad, Sarah I; AuCoin-Power, Michelle; Urbain, Charline; Smith, Mary Lou; Pang, Elizabeth W; Taylor, Margot J

2016-07-01

Theory of Mind (ToM) is the ability to understand the perspectives, mental states and beliefs of others in order to anticipate their behaviour and is therefore crucial to social interactions. Although fMRI has been widely used to establish the neural networks implicated in ToM, little is known about the timing of ToM-related brain activity. We used magnetoencephalography (MEG) to measure the neural processes underlying ToM, as MEG provides very accurate timing and excellent spatial localization of brain processes. We recorded MEG activity during a false belief task, a reliable measure of ToM, in twenty young adults (10 females). MEG data were recorded in a 151 sensor CTF system (MISL, Coquitlam, BC) and data were co-registered to each participant's MRI (Siemens 3T) for source reconstruction. We found stronger right temporoparietal junction (rTPJ) activations in the false belief condition from 150ms to 225ms, in the right precuneus from 275ms to 375ms, in the right inferior frontal gyrus from 200ms to 300ms and the superior frontal gyrus from 300ms to 400ms. Our findings extend the literature by demonstrating the timing and duration of neural activity in the main regions involved in the "mentalizing" network, showing that activations related to false belief in adults are predominantly right lateralized and onset around 100ms. The sensitivity of MEG will allow us to determine spatial and temporal differences in the brain processes in ToM in younger populations or those who demonstrate deficits in this ability. Copyright © 2016 Elsevier Inc. All rights reserved.

Three-dimensional modeling of the Ca II H and K lines in the solar atmosphere

NASA Astrophysics Data System (ADS)

Bjørgen, Johan P.; Sukhorukov, Andrii V.; Leenaarts, Jorrit; Carlsson, Mats; de la Cruz Rodríguez, Jaime; Scharmer, Göran B.; Hansteen, Viggo H.

2018-03-01

Context. CHROMIS, a new imaging spectrometer at the Swedish 1-m Solar Telescope (SST), can observe the chromosphere in the H and K lines of Ca II at high spatial and spectral resolution. Accurate modeling as well as an understanding of the formation of these lines are needed to interpret the SST/CHROMIS observations. Such modeling is computationally challenging because these lines are influenced by strong departures from local thermodynamic equilibrium, three-dimensional radiative transfer, and partially coherent resonance scattering of photons. Aim. We aim to model the Ca II H and K lines in 3D model atmospheres to understand their formation and to investigate their diagnostic potential for probing the chromosphere. Methods: We model the synthetic spectrum of Ca II using the radiative transfer code Multi3D in three different radiation-magnetohydrodynamic model atmospheres computed with the Bifrost code. We classify synthetic intensity profiles according to their shapes and study how their features are related to the physical properties in the model atmospheres. We investigate whether the synthetic data reproduce the observed spatially-averaged line shapes, center-to-limb variation and compare this data with SST/CHROMIS images. Results: The spatially-averaged synthetic line profiles show too low central emission peaks, and too small separation between the peaks. The trends of the observed center-to-limb variation of the profiles properties are reproduced by the models. The Ca II H and K line profiles provide a temperature diagnostic of the temperature minimum and the temperature at the formation height of the emission peaks. The Doppler shift of the central depression is an excellent probe of the velocity in the upper chromosphere.

A pastoral landscape for millennia: Investigating pastoral mobility in northeastern Jordan using quantitative spatial analyses

NASA Astrophysics Data System (ADS)

Meister, Julia; Knitter, Daniel; Krause, Jan; Müller-Neuhof, Bernd; Schütt, Brigitta

2017-04-01

Northeastern Jordan is one of the few remaining regions in the Middle East where pastoral nomadism is still practiced. In this desert region, pastoral mobility is an adapted land use—able to cope with low rainfall rates, great seasonal and annual rainfall variations and thus heterogeneous vegetation and water availability. During winter, herders and their livestock move into the desert; in summer they move to the desert margins to places with perennial water supply. The system of mobile pastoralism was introduced during the Early Late Neolithic. Within the basaltic region of northeastern Jordan, there is a dense distribution of archeological remains; some of them can be linked to pastoral groups due to the herders' ancient practice of building agglomerations of sub-circular enclosures ('clustered enclosures') made of basalt boulders for corralling their flocks and domestic activities. The resulting features provide an excellent opportunity to investigate a pastoral landscape that has been frequently used by herders during the last eight to nine millennia. In this study, 9118 clustered enclosures in the northeastern Jordanian basalt desert have been systematically recorded using satellite imagery. In order to investigate potential migration or communication routes, grazing lands and social interactions of former pastoralists, we examine their first- and second-order characteristics using distance and density based approaches of point pattern analyses by integrating geomorphometric and geomorphological site properties. The results of this spatial analysis are combined with available archaeological data and a review on traditional herding practices in northeastern Jordan. Overall, the results demonstrate that the observed spatial distribution of clustered enclosures is influenced locally by natural characteristics but regionally by cultural practices.

Excellent approach to modeling urban expansion by fuzzy cellular automata: agent base model

NASA Astrophysics Data System (ADS)

Khajavigodellou, Yousef; Alesheikh, Ali A.; Mohammed, Abdulrazak A. S.; Chapi, Kamran

2014-09-01

Recently, the interaction between humans and their environment is the one of important challenges in the world. Landuse/ cover change (LUCC) is a complex process that includes actors and factors at different social and spatial levels. The complexity and dynamics of urban systems make the applicable practice of urban modeling very difficult. With the increased computational power and the greater availability of spatial data, micro-simulation such as the agent based and cellular automata simulation methods, has been developed by geographers, planners, and scholars, and it has shown great potential for representing and simulating the complexity of the dynamic processes involved in urban growth and land use change. This paper presents Fuzzy Cellular Automata in Geospatial Information System and remote Sensing to simulated and predicted urban expansion pattern. These FCA-based dynamic spatial urban models provide an improved ability to forecast and assess future urban growth and to create planning scenarios, allowing us to explore the potential impacts of simulations that correspond to urban planning and management policies. A fuzzy inference guided cellular automata approach. Semantic or linguistic knowledge on Land use change is expressed as fuzzy rules, based on which fuzzy inference is applied to determine the urban development potential for each pixel. The model integrates an ABM (agent-based model) and FCA (Fuzzy Cellular Automata) to investigate a complex decision-making process and future urban dynamic processes. Based on this model rapid development and green land protection under the influences of the behaviors and decision modes of regional authority agents, real estate developer agents, resident agents and non- resident agents and their interactions have been applied to predict the future development patterns of the Erbil metropolitan region.

Universal Spatial Correlation Functions for Describing and Reconstructing Soil Microstructure

PubMed Central

Skvortsova, Elena B.; Mallants, Dirk

2015-01-01

Structural features of porous materials such as soil define the majority of its physical properties, including water infiltration and redistribution, multi-phase flow (e.g. simultaneous water/air flow, or gas exchange between biologically active soil root zone and atmosphere) and solute transport. To characterize soil microstructure, conventional soil science uses such metrics as pore size and pore-size distributions and thin section-derived morphological indicators. However, these descriptors provide only limited amount of information about the complex arrangement of soil structure and have limited capability to reconstruct structural features or predict physical properties. We introduce three different spatial correlation functions as a comprehensive tool to characterize soil microstructure: 1) two-point probability functions, 2) linear functions, and 3) two-point cluster functions. This novel approach was tested on thin-sections (2.21×2.21 cm2) representing eight soils with different pore space configurations. The two-point probability and linear correlation functions were subsequently used as a part of simulated annealing optimization procedures to reconstruct soil structure. Comparison of original and reconstructed images was based on morphological characteristics, cluster correlation functions, total number of pores and pore-size distribution. Results showed excellent agreement for soils with isolated pores, but relatively poor correspondence for soils exhibiting dual-porosity features (i.e. superposition of pores and micro-cracks). Insufficient information content in the correlation function sets used for reconstruction may have contributed to the observed discrepancies. Improved reconstructions may be obtained by adding cluster and other correlation functions into reconstruction sets. Correlation functions and the associated stochastic reconstruction algorithms introduced here are universally applicable in soil science, such as for soil classification, pore-scale modelling of soil properties, soil degradation monitoring, and description of spatial dynamics of soil microbial activity. PMID:26010779

Universal spatial correlation functions for describing and reconstructing soil microstructure.

PubMed

Karsanina, Marina V; Gerke, Kirill M; Skvortsova, Elena B; Mallants, Dirk

2015-01-01

Structural features of porous materials such as soil define the majority of its physical properties, including water infiltration and redistribution, multi-phase flow (e.g. simultaneous water/air flow, or gas exchange between biologically active soil root zone and atmosphere) and solute transport. To characterize soil microstructure, conventional soil science uses such metrics as pore size and pore-size distributions and thin section-derived morphological indicators. However, these descriptors provide only limited amount of information about the complex arrangement of soil structure and have limited capability to reconstruct structural features or predict physical properties. We introduce three different spatial correlation functions as a comprehensive tool to characterize soil microstructure: 1) two-point probability functions, 2) linear functions, and 3) two-point cluster functions. This novel approach was tested on thin-sections (2.21×2.21 cm2) representing eight soils with different pore space configurations. The two-point probability and linear correlation functions were subsequently used as a part of simulated annealing optimization procedures to reconstruct soil structure. Comparison of original and reconstructed images was based on morphological characteristics, cluster correlation functions, total number of pores and pore-size distribution. Results showed excellent agreement for soils with isolated pores, but relatively poor correspondence for soils exhibiting dual-porosity features (i.e. superposition of pores and micro-cracks). Insufficient information content in the correlation function sets used for reconstruction may have contributed to the observed discrepancies. Improved reconstructions may be obtained by adding cluster and other correlation functions into reconstruction sets. Correlation functions and the associated stochastic reconstruction algorithms introduced here are universally applicable in soil science, such as for soil classification, pore-scale modelling of soil properties, soil degradation monitoring, and description of spatial dynamics of soil microbial activity.

Toward a RPC-based muon tomography system for cargo containers.

NASA Astrophysics Data System (ADS)

Baesso, P.; Cussans, D.; Thomay, C.; Velthuis, J.

2014-10-01

A large area scanner for cosmic muon tomography is currently being developed at University of Bristol. Thanks to their abundance and penetrating power, cosmic muons have been suggested as ideal candidates to scan large containers in search of special nuclear materials, which are characterized by high-Z and high density. The feasibility of such a scanner heavily depends on the detectors used to track the muons: for a typical container, the minimum required sensitive area is of the order of 100 2. The spatial resolution required depends on the geometrical configuration of the detectors. For practical purposes, a resolution of the order of 1 mm or better is desirable. A good time resolution can be exploited to provide momentum information: a resolution of the order of nanoseconds can be used to separate sub-GeV muons from muons with higher energies. Resistive plate chambers have a low cost per unit area and good spatial and time resolution; these features make them an excellent choice as detectors for muon tomography. In order to instrument a large area demonstrator we have produced 25 new readout boards and 30 glass RPCs. The RPCs measure 1800 mm× 600 mm and are read out using 1.68 mm pitch copper strips. The chambers were tested with a standardized procedure, i.e. without optimizing the working parameters to take into account differences in the manufacturing process, and the results show that the RPCs have an efficiency between 87% and 95%. The readout electronics show a signal to noise ratio greater than 20 for minimum ionizing particles. Spatial resolution better than 500 μm can easily be achieved using commercial read out ASICs. These results are better than the original minimum requirements to pass the tests and we are now ready to install the detectors.

Multilocus sequence analysis of Thermoanaerobacter isolates reveals recombining, but differentiated, populations from geothermal springs of the Uzon Caldera, Kamchatka, Russia

PubMed Central

Wagner, Isaac D.; Varghese, Litty B.; Hemme, Christopher L.; Wiegel, Juergen

2013-01-01

Thermal environments have island-like characteristics and provide a unique opportunity to study population structure and diversity patterns of microbial taxa inhabiting these sites. Strains having ≥98% 16S rRNA gene sequence similarity to the obligately anaerobic Firmicutes Thermoanaerobacter uzonensis were isolated from seven geothermal springs, separated by up to 1600 m, within the Uzon Caldera (Kamchatka, Russian Far East). The intraspecies variation and spatial patterns of diversity for this taxon were assessed by multilocus sequence analysis (MLSA) of 106 strains. Analysis of eight protein-coding loci (gyrB, lepA, leuS, pyrG, recA, recG, rplB, and rpoB) revealed that all loci were polymorphic and that nucleotide substitutions were mostly synonymous. There were 148 variable nucleotide sites across 8003 bp concatenates of the protein-coding loci. While pairwise FST values indicated a small but significant level of genetic differentiation between most subpopulations, there was a negligible relationship between genetic divergence and spatial separation. Strains with the same allelic profile were only isolated from the same hot spring, occasionally from consecutive years, and single locus variant (SLV) sequence types were usually derived from the same spring. While recombination occurred, there was an “epidemic” population structure in which a particular T. uzonensis sequence type rose in frequency relative to the rest of the population. These results demonstrate spatial diversity patterns for an anaerobic bacterial species in a relative small geographic location and reinforce the view that terrestrial geothermal springs are excellent places to look for biogeographic diversity patterns regardless of the involved distances. PMID:23801987

Entanglement growth after a global quench in free scalar field theory

DOE PAGES

Cotler, Jordan S.; Hertzberg, Mark P.; Mezei, Márk; ...

2016-11-28

We compute the entanglement and Rényi entropy growth after a global quench in various dimensions in free scalar field theory. We study two types of quenches: a boundary state quench and a global mass quench. Both of these quenches are investigated for a strip geometry in 1, 2, and 3 spatial dimensions, and for a spherical geometry in 2 and 3 spatial dimensions. We compare the numerical results for massless free scalars in these geometries with the predictions of the analytical quasiparticle model based on EPR pairs, and find excellent agreement in the limit of large region sizes. As amore » result, at subleading order in the region size, we observe an anomalous logarithmic growth of entanglement coming from the zero mode of the scalar.« less

Entanglement growth after a global quench in free scalar field theory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cotler, Jordan S.; Hertzberg, Mark P.; Mezei, Márk

We compute the entanglement and Rényi entropy growth after a global quench in various dimensions in free scalar field theory. We study two types of quenches: a boundary state quench and a global mass quench. Both of these quenches are investigated for a strip geometry in 1, 2, and 3 spatial dimensions, and for a spherical geometry in 2 and 3 spatial dimensions. We compare the numerical results for massless free scalars in these geometries with the predictions of the analytical quasiparticle model based on EPR pairs, and find excellent agreement in the limit of large region sizes. As amore » result, at subleading order in the region size, we observe an anomalous logarithmic growth of entanglement coming from the zero mode of the scalar.« less

Bypass transition and spot nucleation in boundary layers

NASA Astrophysics Data System (ADS)

Kreilos, Tobias; Khapko, Taras; Schlatter, Philipp; Duguet, Yohann; Henningson, Dan S.; Eckhardt, Bruno

2016-08-01

The spatiotemporal aspects of the transition to turbulence are considered in the case of a boundary-layer flow developing above a flat plate exposed to free-stream turbulence. Combining results on the receptivity to free-stream turbulence with the nonlinear concept of a transition threshold, a physically motivated model suggests a spatial distribution of spot nucleation events. To describe the evolution of turbulent spots a probabilistic cellular automaton is introduced, with all parameters directly obtained from numerical simulations of the boundary layer. The nucleation rates are then combined with the cellular automaton model, yielding excellent quantitative agreement with the statistical characteristics for different free-stream turbulence levels. We thus show how the recent theoretical progress on transitional wall-bounded flows can be extended to the much wider class of spatially developing boundary-layer flows.

Temporal and spatial variability of rainfall pH

Treesearch

Richard G. Semonin

1977-01-01

The distribution of average rainwater pH over an area of 1,800 km² containing 81 collectors was determined from 25 storm events. The areal average of the data was pH 4.9, with a range of values from 4.3 to 6.8. A single storm event was studied to determine the change of pH as a function of time. The initial rain was pH 7.1, decreasing to 4.1. An excellent...

Temporal and spatial characterization of zenith total delay (ZTD) in North Europe

NASA Astrophysics Data System (ADS)

Stoew, B.; Elgered, G.

2003-04-01

The estimates of ZTD are often treated as realizations of random walk stochastic processes. We derive the corresponding process parameters for 34 different locations in North Europe using two measurement techniques - Global Positioning System (GPS) and Water Vapor Radiometer (WVR). GPS-estimated ZTD is an excellent candidate for data assimilation in numerical weather prediction (NWP) models in terms of both spatial and temporal resolution. We characterize the long term behavior of the ZTD as a function of site latitude and height. The spatial characteristics of the ZTD are studied as a function of site separation and season. We investigate the influence of the time-interpolated atmospheric pressure data used for the estimation of zenith wet delay (ZWD) from ZTD. Characterization of extreme atmospheric events can aid the development of an early warning system. We consider two types of extreme meteorological phenomena with regard to their spatial scales. The first type concerns larger regions (including several GPS sites); the extreme weather is characterized by intense precipitation which may result in a flood. The second type is related to local variations in the ZWD/ZTD and can be used for detection/monitoring of passing atmospheric fronts.

Nightlights along the Eastern Alpine river network in Austria and Italy as a proxy of human presence

NASA Astrophysics Data System (ADS)

Ceola, Serena; Montanari, Alberto; Parajka, Juraj; Viglione, Alberto; Bloeschl, Guenter

2016-04-01

Understanding the spatial and temporal distribution of human settlements and economic activities in relation to the geographical location of streams and rivers is of fundamental concern for several hydrologic issues such as flood risk and drought management, water pollution and exploitation, as well as stream ecological purposes. Indeed, the human presence close to streams and rivers is known to have consistently increased worldwide, therefore introducing dramatic anthropogenic and environmental changes. This research study analyses the spatial and temporal evolution of human settlements and associated economic activity, derived from nighttime lights, in the Eastern Alpine region. Nightlights, available at a 1 km spatial resolution and for a 22-year period, constitute an excellent data base, which allows to explore in details human signatures. In this experiment, nightlights are associated to five distinct distance-from-river classes, by using the CCM river network data base. From the temporal perspective, nightlights in correspondence of each distance-from-river class within each study region show an overall increasing trend, whereas the spatial trends differs among the study regions. More information about the analysis and project are available at: http://www.water-switch-on.eu/.

Global long-term ozone trends derived from different observed and modelled data sets

NASA Astrophysics Data System (ADS)

Coldewey-Egbers, M.; Loyola, D.; Zimmer, W.; van Roozendael, M.; Lerot, C.; Dameris, M.; Garny, H.; Braesicke, P.; Koukouli, M.; Balis, D.

2012-04-01

The long-term behaviour of stratospheric ozone amounts during the past three decades is investigated on a global scale using different observed and modelled data sets. Three European satellite sensors GOME/ERS-2, SCIAMACHY/ENVISAT, and GOME-2/METOP are combined and a merged global monthly mean total ozone product has been prepared using an inter-satellite calibration approach. The data set covers the 16-years period from June 1995 to June 2011 and it exhibits an excellent long-term stability, which is required for such trend studies. A multiple linear least-squares regression algorithm using different explanatory variables is applied to the time series and statistically significant positive trends are detected in the northern mid latitudes and subtropics. Global trends are also estimated using a second satellite-based Merged Ozone Data set (MOD) provided by NASA. For few selected geographical regions ozone trends are additionally calculated using well-maintained measurements of individual Dobson/Brewer ground-based instruments. A reasonable agreement in the spatial patterns of the trends is found amongst the European satellite, the NASA satellite, and the ground-based observations. Furthermore, two long-term simulations obtained with the Chemistry-Climate Models E39C-A provided by German Aerospace Center and UMUKCA-UCAM provided by University of Cambridge are analysed.

The Spectropolarimeter for Planetary Exploration: SPEX

NASA Astrophysics Data System (ADS)

Laan, Erik; Stam, Daphne; Snik, Frans; Karalidi, Theodora; Keller, Christoph; ter Horst, Rik; Navarro, Ramon; Oomen, Gijsbert; de Vries, Johan; Hoogeveen, Ruud

2017-11-01

SPEX (Spectropolarimeter for Planetary EXploration) is an innovative, compact remotesensing instrument for measuring and characterizing aerosols in the atmosphere. The shoebox size instrument is capable of accurate full linear spectropolarimetry without moving parts or liquid crystals. High precision polarimetry is performed through encoding the degree and angle of linear polarization of the incoming light in a sinusoidal modulation of the spectrum. Measuring this intensity spectrum thus provides the spectral dependence of the degree and angle of linear polarization. Polarimetry has proven to be an excellent tool to study microphysical properties of atmospheric particles. Such information is essential to better understand the weather and climate of a planet. Although SPEX can be used to study any planetary atmosphere, including the Earth's, the current design of SPEX is tailored to study Martian dust and clouds from an orbiting platform. SPEX' 9 entrance pupils can simultaneously measure intensity spectra from 0.4 to 0.8 microns, in different directions along the flight direction (including two limb viewing directions). This way, the scattering phase functions of dust and cloud particles within a ground pixel are sampled while flying over it. SPEX can provide synergy with instruments on rovers and landers, as it provides an overview of spatial and temporal variations of the Martian atmosphere.

A 32 mm  ×  32 mm  ×  22 mm monolithic LYSO:Ce detector with dual-sided digital photon counter readout for ultrahigh-performance TOF-PET and TOF-PET/MRI

NASA Astrophysics Data System (ADS)

Borghi, Giacomo; Peet, Bart Jan; Tabacchini, Valerio; Schaart, Dennis R.

2016-07-01

New applications for positron emission tomography (PET) and combined PET/magnetic resonance imaging (MRI) are currently emerging, for example in the fields of neurological, breast, and pediatric imaging. Such applications require improved image quality, reduced dose, shorter scanning times, and more precise quantification. This can be achieved by means of dedicated scanners based on ultrahigh-performance detectors, which should provide excellent spatial resolution, precise depth-of-interaction (DOI) estimation, outstanding time-of-flight (TOF) capability, and high detection efficiency. Here, we introduce such an ultrahigh-performance TOF/DOI PET detector, based on a 32 mm  ×  32 mm  ×  22 mm monolithic LYSO:Ce crystal. The 32 mm  ×  32 mm front and back faces of the crystal are coupled to a digital photon counter (DPC) array, in so-called dual-sided readout (DSR) configuration. The fully digital detector offers a spatial resolution of ~1.1 mm full width at half maximum (FWHM)/~1.2 mm mean absolute error, together with a DOI resolution of ~2.4 mm FWHM, an energy resolution of 10.2% FWHM, and a coincidence resolving time of 147 ps FWHM. The time resolution closely approaches the best results (135 ps FWHM) obtained to date with small crystals made from the same material coupled to the same DPC arrays, illustrating the excellent correction for optical and electronic transit time spreads that can be achieved in monolithic scintillators using maximum-likelihood techniques for estimating the time of interaction. The performance barely degrades for events with missing data (up to 6 out of 32 DPC dies missing), permitting the use of almost all events registered under realistic acquisition conditions. Moreover, the calibration procedures and computational methods used for position and time estimation follow recently made improvements that make them fast and practical, opening up realistic perspectives for using DSR monolithic scintillator detectors in TOF-PET and TOF-PET/MRI systems.

Equality and Excellence in Higher Education--Is It Possible?

ERIC Educational Resources Information Center

Guri, Sarah

1986-01-01

The underlying philosophy of Everyman's University, Israel's open university, is to maintain educational excellence while providing equal educational opportunity to large segments of the population through free access and a flexible program of distance education. (MSE)

Transparent ceramic scintillators for gamma spectroscopy and MeV imaging

NASA Astrophysics Data System (ADS)

Cherepy, N. J.; Seeley, Z. M.; Payne, S. A.; Swanberg, E. L.; Beck, P. R.; Schneberk, D. J.; Stone, G.; Perry, R.; Wihl, B.; Fisher, S. E.; Hunter, S. L.; Thelin, P. A.; Thompson, R. R.; Harvey, N. M.; Stefanik, T.; Kindem, J.

2015-09-01

We report on the development of two new mechanically rugged, high light yield transparent ceramic scintillators: (1) Ce-doped Gd-garnet for gamma spectroscopy, and (2) Eu-doped Gd-Lu-bixbyite for radiography. GYGAG(Ce) garnet transparent ceramics offer ρ = 5.8g/cm3, Zeff = 48, principal decay of <100 ns, and light yield of 50,000 Ph/MeV. Gdgarnet ceramic scintillators offer the best energy resolution of any oxide scintillator, as good as R(662 keV) = 3% (Si-PD readout) for small sizes and typically R(662 keV) < 5% for cubic inch sizes. For radiography, the bixbyite transparent ceramic scintillator, (Gd,Lu,Eu)2O3, or "GLO," offers excellent x-ray stopping, with ρ = 9.1 g/cm3 and Zeff = 68. Several 10" diameter by 0.1" thickness GLO scintillators have been fabricated. GLO outperforms scintillator glass for high energy radiography, due to higher light yield (55,000 Ph/MeV) and better stopping, while providing spatial resolution of >8 lp/mm.

Parallel Adaptive High-Order CFD Simulations Characterizing Cavity Acoustics for the Complete SOFIA Aircraft

NASA Technical Reports Server (NTRS)

Barad, Michael F.; Brehm, Christoph; Kiris, Cetin C.; Biswas, Rupak

2014-01-01

This paper presents one-of-a-kind MPI-parallel computational fluid dynamics simulations for the Stratospheric Observatory for Infrared Astronomy (SOFIA). SOFIA is an airborne, 2.5-meter infrared telescope mounted in an open cavity in the aft of a Boeing 747SP. These simulations focus on how the unsteady flow field inside and over the cavity interferes with the optical path and mounting of the telescope. A temporally fourth-order Runge-Kutta, and spatially fifth-order WENO-5Z scheme was used to perform implicit large eddy simulations. An immersed boundary method provides automated gridding for complex geometries and natural coupling to a block-structured Cartesian adaptive mesh refinement framework. Strong scaling studies using NASA's Pleiades supercomputer with up to 32,000 cores and 4 billion cells shows excellent scaling. Dynamic load balancing based on execution time on individual AMR blocks addresses irregularities caused by the highly complex geometry. Limits to scaling beyond 32K cores are identified, and targeted code optimizations are discussed.

Intraoperative computed tomography.

PubMed

Tonn, J C; Schichor, C; Schnell, O; Zausinger, S; Uhl, E; Morhard, D; Reiser, M

2011-01-01

Intraoperative computed tomography (iCT) has gained increasing impact among modern neurosurgical techniques. Multislice CT with a sliding gantry in the OR provides excellent diagnostic image quality in the visualization of vascular lesions as well as bony structures including skull base and spine. Due to short acquisition times and a high spatial and temporal resolution, various modalities such as iCT-angiography, iCT-cerebral perfusion and the integration of intraoperative navigation with automatic re-registration after scanning can be performed. This allows a variety of applications, e.g. intraoperative angiography, intraoperative cerebral perfusion studies, update of cerebral and spinal navigation, stereotactic procedures as well as resection control in tumour surgery. Its versatility promotes its use in a multidisciplinary setting. Radiation exposure is comparable to standard CT systems outside the OR. For neurosurgical purposes, however, new hardware components (e.g. a radiolucent headholder system) had to be developed. Having a different range of applications compared to intraoperative MRI, it is an attractive modality for intraoperative imaging being comparatively easy to install and cost efficient.

[Prenatal diagnosis of isolated otocefalia. Usefulness of three-dimensional ultrasound].

PubMed

Escribano Abad, David; Arbués Gabarre, Juan; Gómez Montes, Enery; Puente Agueda, José Manuel; Herraiz García, Ignacio; Galindo Izquierdo, Alberto

2011-08-01

Otocephaly is a rare and lethal congenital malformation characterized by the presence of agnathia, microstomia, aglossia and synotia. Despite its frequent association with severe malformations, diagnosis in the few published cases is usually made at III trimester. In this case, three-dimensional ultrasound scan was performed in a Chinese primigravida with no remarkable personal nor familiar history since mandible was difficulty visualized with two-dimensional sonography at 21 weeks of gestation. Multiplanar and rendering mode showed the typical cervicofacial features of otocephaly without associated malformations. After parental counselling, they opted for termination of pregnancy and necropsy confirmed our prenatal findings. Our case shows the usefulness of three-dimensional ultrasound in assessing fetal cervicofacial pathology. Volumetric capture allows a delayed study of fetal anatomy and multiplanar mode offers the reconstruction of views whose achivement is difficult with conventional 2D ultrasound. Surface rendering provides excellent spatial vision and enables parents to understand the severity of the malformation thus helping with their decisions.

In vivo Expression of a Light-activatable Potassium Channel Using Unnatural Amino Acids

PubMed Central

Kang, Ji-Yong; Kawaguchi, Daichi; Coin, Irene; Xiang, Zheng; O’Leary, Dennis D. M.; Slesinger, Paul A.; Wang, Lei

2013-01-01

SUMMARY Optical control of protein function provides excellent spatial-temporal resolution for studying proteins in situ. Although light-sensitive exogenous proteins and ligands have been employed to manipulate neuronal activity, a method for optical control of neuronal proteins using unnatural amino acids (Uaa) in vivo is lacking. Here, we describe the genetic incorporation of a photoreactive Uaa into the pore of an inwardly-rectifying potassium channel Kir2.1. The Uaa occluded the pore, rendering the channel non-conducting, and upon brief light illumination, was released to permit outward K+ current. Expression of this photo-inducible inwardly rectifying potassium (PIRK) channel in rat hippocampal neurons created a light-activatable PIRK switch for suppressing neuronal firing. We also expressed PIRK channels in embryonic mouse neocortex in vivo and demonstrated a light-activated PIRK current in cortical neurons. The principles applied here to a potassium channel could be generally expanded to other proteins expressed in the brain to enable optical regulation. PMID:24139041

Water vapor profiling using microwave radiometry

NASA Technical Reports Server (NTRS)

Wang, J. R.; Wilheit, T. T.

1988-01-01

Water vapor is one of the most important constituents in the Earth's atmosphere. Its spatial and temporal variations affect a wide spectrum of meteorological phenomena ranging from the formation of clouds to the development of severe storms. The passive microwave technique offers an excellent means for water vapor measurements. It can provide both day and night coverage under most cloud conditions. Two water vapor absorption features, at 22 and 183 GHz, were explored in the past years. The line strengths of these features differ by nearly two orders of magnitude. As a consequence, the techniques and the final products of water vapor measurements are also quite different. The research effort in the past few years was to improve and extend the retrieval algorithm to the measurements of water vapor profiles under cloudy conditions. In addition, the retrieval of total precipitable water using 183 GHz measurements, but in a manner analogous to the use of 22 GHz measurements, to increase measurement sensitivity for atmospheres of very low moisture content was also explored.

Dynamic longitudinal investigation of individual nerve endings in the skin of anesthetized mice using in vivo two-photon microscopy

NASA Astrophysics Data System (ADS)

Yuryev, Mikhail; Khiroug, Leonard

2012-04-01

Visualization of individual cutaneous nerve endings has previously relied on laborious procedures of tissue excision, fixation, sectioning and staining for light or electron microscopy. We present a method for non-invasive, longitudinal two-photon microscopy of single nerve endings within the skin of anesthetized transgenic mice. Besides excellent signal-to-background ratio and nanometer-scale spatial resolution, this method offers time-lapse ``movies'' of pathophysiological changes in nerve fine structure over minutes, hours, days or weeks. Structure of keratinocytes and dermal matrix is visualized simultaneously with nerve endings, providing clear landmarks for longitudinal analysis. We further demonstrate feasibility of dissecting individual nerve fibers with infra-red laser and monitoring their degradation and regeneration. In summary, our excision-free optical biopsy technique is ideal for longitudinal microscopic analysis of animal skin and skin innervations in vivo and can be applied widely in preclinical models of chronic pain, allergies, skin cancers and a variety of dermatological disorders.

Automated Spatiotemporal Analysis of Fibrils and Coronal Rain Using the Rolling Hough Transform

NASA Astrophysics Data System (ADS)

Schad, Thomas

2017-09-01

A technique is presented that automates the direction characterization of curvilinear features in multidimensional solar imaging datasets. It is an extension of the Rolling Hough Transform (RHT) technique presented by Clark, Peek, and Putman ( Astrophys. J. 789, 82, 2014), and it excels at rapid quantification of spatial and spatiotemporal feature orientation even for applications with a low signal-to-noise ratio. It operates on a pixel-by-pixel basis within a dataset and reliably quantifies orientation even for locations not centered on a feature ridge, which is used here to derive a quasi-continuous map of the chromospheric fine-structure projection angle. For time-series analysis, a procedure is developed that uses a hierarchical application of the RHT to automatically derive the apparent motion of coronal rain observed off-limb. Essential to the success of this technique is the formulation presented in this article for the RHT error analysis as it provides a means to properly filter results.

Evaluation of fluorophores for optimal performance in localization-based super-resolution imaging

PubMed Central

Dempsey, Graham T.; Vaughan, Joshua C.; Chen, Kok Hao; Bates, Mark; Zhuang, Xiaowei

2011-01-01

One approach to super-resolution fluorescence imaging uses sequential activation and localization of individual fluorophores to achieve high spatial resolution. Essential to this technique is the choice of fluorescent probes — the properties of the probes, including photons per switching event, on/off duty cycle, photostability, and number of switching cycles, largely dictate the quality of super-resolution images. While many probes have been reported, a systematic characterization of the properties of these probes and their impact on super-resolution image quality has been described in only a few cases. Here, we quantitatively characterized the switching properties of 26 organic dyes and directly related these properties to the quality of super-resolution images. This analysis provides a set of guidelines for characterization of super-resolution probes and a resource for selecting probes based on performance. Our evaluation identified several photoswitchable dyes with good to excellent performance in four independent spectral ranges, with which we demonstrated low crosstalk, four-color super-resolution imaging. PMID:22056676

Digital Mammography with a Mosaic of CCD-Arrays

NASA Technical Reports Server (NTRS)

Jalink, Antony, Jr. (Inventor); McAdoo, James A. (Inventor)

1996-01-01

The present invention relates generally to a mammography device and method and more particularly to a novel digital mammography device and method to detect microcalcifications of precancerous tissue. A digital mammography device uses a mosaic of electronic digital imaging arrays to scan an x-ray image. The mosaic of arrays is repositioned several times to expose different portions of the image, until the entire image is scanned. The data generated by the arrays during each exposure is stored in a computer. After the final exposure, the computer combines data of the several partial images to produce a composite of the original x-ray image. An aperture plate is used to reduce scatter and the overall exposure of the patient to x-rays. The novelty of this invention is that it provides a digital mammography device with large field coverage, high spatial resolution, scatter rejection, excellent contrast characteristics and lesion detectability under clinical conditions. This device also shields the patient from excessive radiation, can detect extremely small calcifications and allows manipulation and storage of the image.

Advances in quantum cascade lasers for security and crime-fighting

NASA Astrophysics Data System (ADS)

Normand, Erwan L.; Stokes, Robert J.; Hay, Kenneth; Foulger, Brian; Lewis, Colin

2010-10-01

Advances in the application of Quantum Cascade Lasers (QCL) to trace gas detection will be presented. The solution is real time (~1 μsec per scan), is insensitive to turbulence and vibration, and performs multiple measurements in one sweep. The QCL provides a large dynamic range, which is a linear response from ppt to % level. The concentration can be derived with excellent immunity from cross interference. Point sensing sensors developed by Cascade for home made and commercial explosives operate by monitoring key constituents in real time and matching this to a spatial event (i.e. sniffer device placed close to an object or person walking through portal (overt or covert). Programmable signature detection capability allows for detection of multiple chemical compounds along the most likely array of explosive chemical formulation. The advantages of configuration as "point sensing" or "stand off" will be discussed. In addition to explosives this method is highly applicable to the detection of mobile drugs labs through volatile chemical release.

Energy Transfer Highway in Nd3+-Sensitized Nanoparticles for Efficient near-Infrared Bioimaging.

PubMed

Cao, Cong; Xue, Meng; Zhu, Xingjun; Yang, Pengyuan; Feng, Wei; Li, Fuyou

2017-06-07

Despite the large absorption cross-section of Nd 3+ dopant as a sensitizer in lanthanide doped luminescence system, the strong cross-relaxation effect of it impedes the promotion of doping concentration and thus reduces the utilization of excitation light. In this work, we introduce a highly efficient acceptor, Yb 3+ ion, which can quickly receive energy from Nd 3+ ions, to construct an energy transfer highway for the enhancement of near-infrared emission. By using the energy transfer highway, the doping amount of Nd 3+ ions in our NaYF 4 :Yb,Nd@CaF 2 core/shell nanoparticles (CSNPs) can be markedly elevated to 60%. The quantum yield of CSNPs was determined to be 20.7%, which provides strong near-infrared luminescence for further bioimaging application. Remarkably, deep tissue penetration depth (∼10 mm) in in vitro imaging and high spatial resolution of blood vessel (∼0.19 mm) in in vivo imaging were detected clearly with weak autofluorescence, demonstrating that probes can be used as excellent NIR biosensors.

Breast MRI radiogenomics: Current status and research implications.

PubMed

Grimm, Lars J

2016-06-01

Breast magnetic resonance imaging (MRI) radiogenomics is an emerging area of research that has the potential to directly influence clinical practice. Clinical MRI scanners today are capable of providing excellent temporal and spatial resolution, which allows extraction of numerous imaging features via human extraction approaches or complex computer vision algorithms. Meanwhile, advances in breast cancer genetics research has resulted in the identification of promising genes associated with cancer outcomes. In addition, validated genomic signatures have been developed that allow categorization of breast cancers into distinct molecular subtypes as well as predict the risk of cancer recurrence and response to therapy. Current radiogenomics research has been directed towards exploratory analysis of individual genes, understanding tumor biology, and developing imaging surrogates to genetic analysis with the long-term goal of developing a meaningful tool for clinical care. The background of breast MRI radiogenomics research, image feature extraction techniques, approaches to radiogenomics research, and promising areas of investigation are reviewed. J. Magn. Reson. Imaging 2016;43:1269-1278. © 2015 Wiley Periodicals, Inc.

GADOLINIUM(Gd)-BASED and Ion Oxide Nanoparticle Contrast Agents for Pre-Clinical and Clinical Magnetic Resonance Imaging (mri) Research

NASA Astrophysics Data System (ADS)

Ng, Thian C.

2012-06-01

It is known that one strength of MRI is its excellent soft tissue discrimination. It naturally provides sufficient contrast between the structural differences of normal and pathological tissues, their spatial extent and progression. However, to further extend its applications and enhance even more contrast for clinical studies, various Gadolinium (Gd)-based contrast agents have been developed for different organs (brain strokes, cancer, cardio-MRI, etc). These Gd-based contrast agents are paramagnetic compounds that have strong T1-effect for enhancing the contrast between tissue types. Gd-contrast can also enhance magnetic resonance angiography (CE-MRA) for studying stenosis and for measuring perfusion, vascular susceptibility, interstitial space, etc. Another class of contrast agents makes use of ferrite iron oxide nanoparticles (including Superparamagnetic Ion Oxide (SPIO) and Ultrasmall Superparamagnetic Iron Oxide (USPIO)). These nanoparticles have superior magnetic susceptibility effect and produce a drop in signal, namely in T2*-weighted images, useful for the determination of lymph nodes metastases, angiogenesis and arteriosclerosis plaques.

Statistical Forecasting of Current and Future Circum-Arctic Ground Temperatures and Active Layer Thickness

NASA Astrophysics Data System (ADS)

Aalto, J.; Karjalainen, O.; Hjort, J.; Luoto, M.

2018-05-01

Mean annual ground temperature (MAGT) and active layer thickness (ALT) are key to understanding the evolution of the ground thermal state across the Arctic under climate change. Here a statistical modeling approach is presented to forecast current and future circum-Arctic MAGT and ALT in relation to climatic and local environmental factors, at spatial scales unreachable with contemporary transient modeling. After deploying an ensemble of multiple statistical techniques, distance-blocked cross validation between observations and predictions suggested excellent and reasonable transferability of the MAGT and ALT models, respectively. The MAGT forecasts indicated currently suitable conditions for permafrost to prevail over an area of 15.1 ± 2.8 × 106 km2. This extent is likely to dramatically contract in the future, as the results showed consistent, but region-specific, changes in ground thermal regime due to climate change. The forecasts provide new opportunities to assess future Arctic changes in ground thermal state and biogeochemical feedback.

Free-electron-laser coherent diffraction images of individual drug-carrying liposome particles in solution.

PubMed

Huang, Chi-Feng; Liang, Keng S; Hsu, Tsui-Ling; Lee, Tsung-Tse; Chen, Yi-Yun; Yang, Shun-Min; Chen, Hsiang-Hsin; Huang, Shih-Hsin; Chang, Wei-Hau; Lee, Ting-Kuo; Chen, Peilin; Peng, Kuei-En; Chen, Chien-Chun; Shi, Cheng-Zhi; Hu, Yu-Fang; Margaritondo, Giorgio; Ishikawa, Tetsuya; Wong, Chi-Huey; Hwu, Y

2018-02-08

Using the excellent performances of a SACLA (RIKEN/HARIMA, Japan) X-ray free electron laser (X-FEL), coherent diffraction imaging (CDI) was used to detect individual liposome particles in water, with or without inserted doxorubicin nanorods. This was possible because of the electron density differences between the carrier, the liposome, and the drug. The result is important since liposome nanocarriers at present dominate drug delivery systems. In spite of the low cross-section of the original ingredients, the diffracted intensity of drug-free liposomes was sufficient for spatial reconstruction yielding quantitative structural information. For particles containing doxorubicin, the structural parameters of the nanorods could be extracted from CDI. Furthermore, the measurement of the electron density of the solution enclosed in each liposome provides direct evidence of the incorporation of ammonium sulphate into the nanorods. Overall, ours is an important test for extending the X-FEL analysis of individual nanoparticles to low cross-sectional systems in solution, and also for its potential use to optimize the manufacturing of drug nanocarriers.

MEMS-based tunable gratings and their applications

NASA Astrophysics Data System (ADS)

Yu, Yiting; Yuan, Weizheng; Qiao, Dayong

2015-03-01

The marriage of optics and MEMS has resulted in a new category of optical devices and systems that have unprecedented advantages compared with their traditional counterparts. As an important spatial light modulating technology, diffractive optical MEMS obtains a wide variety of successful commercial applications, e.g. projection displays, optical communication and spectral analysis, due to its features of highly compact, low-cost, IC-compatible, excellent performance, and providing possibilities for developing totally new, yet smart devices and systems. Three most successful MEMS diffraction gratings (GLVs, Polychromator and DMDs) are briefly introduced and their potential applications are analyzed. Then, three different MEMS tunable gratings developed by our group, named as micro programmable blazed gratings (μPBGs) and micro pitch-tunable gratings (μPTGs) working in either digital or analog mode, are demonstrated. The strategies to largely enhance the maximum blazed angle and grating period are described. Some preliminary application explorations based on the developed grating devices are also shown. For our ongoing research focus, we will further improve the device performance to meet the engineering application requirements.

Controlling photophysical properties of ultrasmall conjugated polymer nanoparticles through polymer chain packing

PubMed Central

Piwoński, Hubert; Michinobu, Tsuyoshi; Habuchi, Satoshi

2017-01-01

Applications of conjugated polymer nanoparticles (Pdots) for imaging and sensing depend on their size, fluorescence brightness and intraparticle energy transfer. The molecular design of conjugated polymers (CPs) has been the main focus of the development of Pdots. Here we demonstrate that proper control of the physical interactions between the chains is as critical as the molecular design. The unique design of twisted CPs and fine-tuning of the reprecipitation conditions allow us to fabricate ultrasmall (3.0–4.5 nm) Pdots with excellent photostability. Extensive photophysical and structural characterization reveals the essential role played by the packing of the polymer chains in the particles in the intraparticle spatial alignment of the emitting sites, which regulate the fluorescence brightness and the intraparticle energy migration efficiency. Our findings enhance understanding of the relationship between chain interactions and the photophysical properties of CP nanomaterials, providing a framework for designing and fabricating functional Pdots for imaging applications. PMID:28508857

An Initial Analysis and Reflection of the Metrics Used in the Teaching Excellence Framework in the UK

ERIC Educational Resources Information Center

Gillard, J. W.

2018-01-01

In this paper, we look at the results from the recent Teaching Excellence Framework (2017), which were made publicly available in June 2017. We offer some initial analysis and commentary, look at the primary reasons for providers being awarded Bronze, Silver and Gold, and look at some providers close to the borderline for their award. We…

Pitch dependence of the tolerance of CMOS monolithic active pixel sensors to non-ionizing radiation

NASA Astrophysics Data System (ADS)

Doering, D.; Deveaux, M.; Domachowski, M.; Fröhlich, I.; Koziel, M.; Müntz, C.; Scharrer, P.; Stroth, J.

2013-12-01

CMOS monolithic active pixel sensors (MAPS) have demonstrated excellent performance as tracking detectors for charged particles. They provide an outstanding spatial resolution (a few μm), a detection efficiency of ≳ 99.9 %, very low material budget (0.05 %X0) and good radiation tolerance (≳ 1 Mrad, ≳1013neq /cm2) (Deveaux et al. [1]). This makes them an interesting technology for various applications in heavy ion and particle physics. Their tolerance to bulk damage was recently improved by using high-resistivity (∼ 1 kΩ cm) epitaxial layers as sensitive volume (Deveaux et al. [1], Dorokhov et al. [2]). The radiation tolerance of conventional MAPS is known to depend on the pixel pitch. This is as a higher pitch extends the distance, which signal electrons have to travel by thermal diffusion before being collected. Increased diffusion paths turn into a higher probability of loosing signal charge due to recombination. Provided that a similar effect exists in MAPS with high-resistivity epitaxial layer, it could be used to extend their radiation tolerance further. We addressed this question with MIMOSA-18AHR prototypes, which were provided by the IPHC Strasbourg and irradiated with reactor neutrons. We report about the results of this study and provide evidences that MAPS with 10 μm pixel pitch tolerate doses of ≳ 3 ×1014neq /cm2.

Local structure controls the nonaffine shear and bulk moduli of disordered solids

NASA Astrophysics Data System (ADS)

Schlegel, M.; Brujic, J.; Terentjev, E. M.; Zaccone, A.

2016-01-01

Paradigmatic model systems, which are used to study the mechanical response of matter, are random networks of point-atoms, random sphere packings, or simple crystal lattices; all of these models assume central-force interactions between particles/atoms. Each of these models differs in the spatial arrangement and the correlations among particles. In turn, this is reflected in the widely different behaviours of the shear (G) and compression (K) elastic moduli. The relation between the macroscopic elasticity as encoded in G, K and their ratio, and the microscopic lattice structure/order, is not understood. We provide a quantitative analytical connection between the local orientational order and the elasticity in model amorphous solids with different internal microstructure, focusing on the two opposite limits of packings (strong excluded-volume) and networks (no excluded-volume). The theory predicts that, in packings, the local orientational order due to excluded-volume causes less nonaffinity (less softness or larger stiffness) under compression than under shear. This leads to lower values of G/K, a well-documented phenomenon which was lacking a microscopic explanation. The theory also provides an excellent one-parameter description of the elasticity of compressed emulsions in comparison with experimental data over a broad range of packing fractions.

Passive IR polarization sensors: a new technology for mine detection

NASA Astrophysics Data System (ADS)

Barbour, Blair A.; Jones, Michael W.; Barnes, Howard B.; Lewis, Charles P.

1998-09-01

The problem of mine and minefield detection continues to provide a significant challenge to sensor systems. Although the various sensor technologies (infrared, ground penetrating radar, etc.) may excel in certain situations there does not exist a single sensor technology that can adequately detect mines in all conditions such as time of day, weather, buried or surface laid, etc. A truly robust mine detection system will likely require the fusion of data from multiple sensor technologies. The performance of these systems, however, will ultimately depend on the performance of the individual sensors. Infrared (IR) polarimetry is a new and innovative sensor technology that adds substantial capabilities to the detection of mines. IR polarimetry improves on basic IR imaging by providing improved spatial resolution of the target, an inherent ability to suppress clutter, and the capability for zero (Delta) T imaging. Nichols Research Corporation (Nichols) is currently evaluating the effectiveness of IR polarization for mine detection. This study is partially funded by the U.S. Army Night Vision & Electronic Sensors Directorate (NVESD). The goal of the study is to demonstrate, through phenomenology studies and limited field trials, that IR polarizaton outperforms conventional IR imaging in the mine detection arena.

A high-resolution, confocal laser-scanning microscope and flash photolysis system for physiological studies.

PubMed

Parker, I; Callamaras, N; Wier, W G

1997-06-01

We describe the construction of a high-resolution confocal laser-scanning microscope, and illustrate its use for studying elementary Ca2+ signalling events in cells. An avalanche photodiode module and simple optical path provide a high efficiency system for detection of fluorescence signals, allowing use of a small confocal aperture giving near diffraction-limited spatial resolution (< 300 nm lateral and < 400 nm axial). When operated in line-scan mode, the maximum temporal resolution is 1 ms, and the associated computer software allows complete flexibility to record line-scans continuously for long (minutes) periods or to obtain any desired pixel resolution in x-y scans. An independent UV irradiation system permits simultaneous photolysis of caged compounds over either a uniform, wide field (arc lamp source) or at a tightly focussed spot (frequency-tripled Nd:YAG laser). The microscope thus provides a versatile tool for optical studies of dynamic cellular processes, as well as excellent resolution for morphological studies. The confocal scanner can be added to virtually any inverted microscope for a component cost that is only a small fraction of that of comparable commercial instruments, yet offers better performance and greater versatility.

Incorporating Spatial Data into Enterprise Applications

NASA Astrophysics Data System (ADS)

Akiki, Pierre; Maalouf, Hoda

The main goal of this chapter is to discuss the usage of spatial data within enterprise as well as smaller line-of-business applications. In particular, this chapter proposes new methodologies for storing and manipulating vague spatial data and provides methods for visualizing both crisp and vague spatial data. It also provides a comparison between different types of spatial data, mainly 2D crisp and vague spatial data, and their respective fields of application. Additionally, it compares existing commercial relational database management systems, which are the most widely used with enterprise applications, and discusses their deficiencies in terms of spatial data support. A new spatial extension package called Spatial Extensions (SPEX) is provided in this chapter and is tested on a software prototype.

Spatial epidemiological techniques in cholera mapping and analysis towards a local scale predictive modelling

NASA Astrophysics Data System (ADS)

Rasam, A. R. A.; Ghazali, R.; Noor, A. M. M.; Mohd, W. M. N. W.; Hamid, J. R. A.; Bazlan, M. J.; Ahmad, N.

2014-02-01

Cholera spatial epidemiology is the study of the spread and control of the disease spatial pattern and epidemics. Previous studies have shown that multi-factorial causation such as human behaviour, ecology and other infectious risk factors influence the disease outbreaks. Thus, understanding spatial pattern and possible interrelationship factors of the outbreaks are crucial to be explored an in-depth study. This study focuses on the integration of geographical information system (GIS) and epidemiological techniques in exploratory analyzing the cholera spatial pattern and distribution in the selected district of Sabah. Spatial Statistic and Pattern tools in ArcGIS and Microsoft Excel software were utilized to map and analyze the reported cholera cases and other data used. Meanwhile, cohort study in epidemiological technique was applied to investigate multiple outcomes of the disease exposure. The general spatial pattern of cholera was highly clustered showed the disease spread easily at a place or person to others especially 1500 meters from the infected person and locations. Although the cholera outbreaks in the districts are not critical, it could be endemic at the crowded areas, unhygienic environment, and close to contaminated water. It was also strongly believed that the coastal water of the study areas has possible relationship with the cholera transmission and phytoplankton bloom since the areas recorded higher cases. GIS demonstrates a vital spatial epidemiological technique in determining the distribution pattern and elucidating the hypotheses generating of the disease. The next research would be applying some advanced geo-analysis methods and other disease risk factors for producing a significant a local scale predictive risk model of the disease in Malaysia.

Temporal and spatial evolution characteristics of water environment quality in Heze

NASA Astrophysics Data System (ADS)

Gao, Qian; Zhao, Qiang; Li, Xiumei

2018-06-01

The evolution of water environment is relatively complicated. The study of its characteristics is helpful to grasp the general direction of spatial and temporal evolution of water environment in Heze city, and to carry out water resources development and water environment protection more rationally. The comprehensive pollution index method for calculation, and the observed data are handled by Excel. In order to facilitate the analysis of the basin, Arcgis is utilized to map the watershed map. In addition, for the spatial evolution, surfer12 is used to analyze the spatial evolution characteristics the spatial evolution, and to draw the pictures of spatial evolution of chemical oxygen demand and water quality evolution. The study shows that: (1) In Heze, the quality of water environment has been improved year by year from 2006 to 2013. In 2014, the water environment has deteriorated. The content of volatile phenol has increased greatly, and the evolution trend of COD is close to the trend of the comprehensive pollution index. (2) In terms of Spatial state of water environment, the water quality of Zhuzhao New River and Wanfu River is poor, and Dongyu River water quality is better. Zhuzhao New River and Wanfu River water qualityis often worse than grade V or V, and Dongyu River water quality is mostly maintained in the grade Ⅳ. Through the analysis on the spatial revolution characteristics of water quality and chemical oxygen demand(COD),as a result, water quality is poor in the northern region,and the water quality in the southern region is better in Heze. Although the water quality has changed in recent years, the overall pattern is relatively stable.

Ultra low concentration deltamethrin loaded patch development and evaluation of its repellency against dengue vector Aedes (S) albopictus

PubMed Central

2013-01-01

Background Mosquito repellents and emanators confer protection against mosquito bites through spatial action of emanated vapours which are released into the adjoining environment. Synthetic insecticides released into the environment in ultra low volume vapour phase deter the mosquitoes from biting humans in a protected space. Methods Formulation patches were prepared using the solvent evaporation method over a backing membrane and using Dibutylphthalate (DBT) as a plasticizer. The effect of formulation variables on the deltamethrin release from the patch matrices were studied under accelerated conditions, whereas, HPLC was used for quantitative estimation of deltamethrin. The prepared patch formulations were subjected to physicochemical studies, such as, deltamethrin content, thickness, weight variation, percent moisture content, moisture uptake, surface area and surface pH determination. Deltamethrin-polymer interaction and compatibility was ascertained using DSC and FT-IR, while surface morphology and deltamethrin distribution in the patch were studied using SEM technique. Repellent activity of the patch formulations was evaluated against Ae. albopictus mosquitoes. Results Blends of polymeric combinations of polyvinylpyrrolidone (PVP) and ethyl-cellulose (EC) with admixture of deltamethrin provided prolonged repellent activity against Ae. albopictus mosquitoes. Physicochemical characterisation indicated the suitability of deltamethrin patch formulation with the polymeric combinations of PVP and EC. Patches were very effective against laboratory reared Ae. albopictus mosquitoes. No significant difference was observed between the performance of test patches and commercially available repellent cream Mosqshield®. Conclusion Deltamethrin loaded patches provided effective repellency against Ae. albopictus mosquitoes. The study emphasised that deltamethrin released to the environment in low concentration could be an excellent spatial repellent against hematophagous mosquitoes. PMID:24289656

Two randomized trials provide no consistent evidence for nonmusical cognitive benefits of brief preschool music enrichment.

PubMed

Mehr, Samuel A; Schachner, Adena; Katz, Rachel C; Spelke, Elizabeth S

2013-01-01

Young children regularly engage in musical activities, but the effects of early music education on children's cognitive development are unknown. While some studies have found associations between musical training in childhood and later nonmusical cognitive outcomes, few randomized controlled trials (RCTs) have been employed to assess causal effects of music lessons on child cognition and no clear pattern of results has emerged. We conducted two RCTs with preschool children investigating the cognitive effects of a brief series of music classes, as compared to a similar but non-musical form of arts instruction (visual arts classes, Experiment 1) or to a no-treatment control (Experiment 2). Consistent with typical preschool arts enrichment programs, parents attended classes with their children, participating in a variety of developmentally appropriate arts activities. After six weeks of class, we assessed children's skills in four distinct cognitive areas in which older arts-trained students have been reported to excel: spatial-navigational reasoning, visual form analysis, numerical discrimination, and receptive vocabulary. We initially found that children from the music class showed greater spatial-navigational ability than did children from the visual arts class, while children from the visual arts class showed greater visual form analysis ability than children from the music class (Experiment 1). However, a partial replication attempt comparing music training to a no-treatment control failed to confirm these findings (Experiment 2), and the combined results of the two experiments were negative: overall, children provided with music classes performed no better than those with visual arts or no classes on any assessment. Our findings underscore the need for replication in RCTs, and suggest caution in interpreting the positive findings from past studies of cognitive effects of music instruction.

Spatial distribution and deployment of community-based distributors implementing integrated community case management (iCCM): Geographic information system (GIS) mapping study in three South Sudan states.

PubMed

Pratt, Abigail; Dale, Martin; Olivi, Elena; Miller, Jane

2014-12-01

In late 2012 and in conjunction with South Sudan's Ministry of Health - National Malaria Control Program, PSI (Population Services International) conducted a comprehensive mapping exercise to assess geographical coverage of its integrated community case management (iCCM) program and consider scope for expansion. The operational research was designed to provide evidence and support for low-cost mapping and monitoring systems, demonstrating the use of technology to enhance the quality of programming and to allow for the improved allocation of resources through appropriate and need-based deployment of community-based distributors (CBDs). The survey took place over the course of three months and program staff gathered GPS (global positioning system) data, along with demographic data, for over 1200 CBDs and 111 CBD supervisors operating in six counties in South Sudan. Data was collated, cleaned and quality assured, input into an Excel database, and subsequently uploaded to geographic information system (GIS) for spatial analysis and map production. The mapping results showed that over three-quarters of CBDs were deployed within a five kilometer radius of a health facility or another CBD, contrary to program planning and design. Other characteristics of the CBD and CBD supervisor profiles (age, gender, literacy) were more closely matched with other regional programs. The results of this mapping exercise provided a valuable insight into the contradictions found between a program "deployment plan" and the realities observed during field implementation. It also highlighted an important need for program implementers and national-level strategy makers to consider the natural and community-driven diffusion of CBDs, and take into consideration the strength of the local health facilities when developing a deployment plan.

The Gamma-Ray Imager/Polarimeter for Solar Flares (GRIPS)

NASA Technical Reports Server (NTRS)

Shih, Albert Y.; Lin, Robert P.; Hurford, Gordon J.; Duncan, Nicole A.; Saint-Hilaire, Pascal; Bain, Hazel M.; Boggs, Steven E.; Zoglauer, Andreas C.; Smith, David M.; Tajima, Hiroyasu;

Dedicated Cone-Beam CT System for Extremity Imaging

PubMed Central

Al Muhit, Abdullah; Zbijewski, Wojciech; Thawait, Gaurav K.; Stayman, J. Webster; Packard, Nathan; Senn, Robert; Yang, Dong; Foos, David H.; Yorkston, John; Siewerdsen, Jeffrey H.

2014-01-01

Purpose To provide initial assessment of image quality and dose for a cone-beam computed tomographic (CT) scanner dedicated to extremity imaging. Materials and Methods A prototype cone-beam CT scanner has been developed for imaging the extremities, including the weight-bearing lower extremities. Initial technical assessment included evaluation of radiation dose measured as a function of kilovolt peak and tube output (in milliampere seconds), contrast resolution assessed in terms of the signal difference–to-noise ratio (SDNR), spatial resolution semiquantitatively assessed by using a line-pair module from a phantom, and qualitative evaluation of cadaver images for potential diagnostic value and image artifacts by an expert CT observer (musculoskeletal radiologist). Results The dose for a nominal scan protocol (80 kVp, 108 mAs) was 9 mGy (absolute dose measured at the center of a CT dose index phantom). SDNR was maximized with the 80-kVp scan technique, and contrast resolution was sufficient for visualization of muscle, fat, ligaments and/or tendons, cartilage joint space, and bone. Spatial resolution in the axial plane exceeded 15 line pairs per centimeter. Streaks associated with x-ray scatter (in thicker regions of the patient—eg, the knee), beam hardening (about cortical bone—eg, the femoral shaft), and cone-beam artifacts (at joint space surfaces oriented along the scanning plane—eg, the interphalangeal joints) presented a slight impediment to visualization. Cadaver images (elbow, hand, knee, and foot) demonstrated excellent visibility of bone detail and good soft-tissue visibility suitable to a broad spectrum of musculoskeletal indications. Conclusion A dedicated extremity cone-beam CT scanner capable of imaging upper and lower extremities (including weight-bearing examinations) provides sufficient image quality and favorable dose characteristics to warrant further evaluation for clinical use. © RSNA, 2013 Online supplemental material is available for this article. PMID:24475803

Two Randomized Trials Provide No Consistent Evidence for Nonmusical Cognitive Benefits of Brief Preschool Music Enrichment

PubMed Central

Mehr, Samuel A.; Schachner, Adena; Katz, Rachel C.; Spelke, Elizabeth S.

2013-01-01

Young children regularly engage in musical activities, but the effects of early music education on children's cognitive development are unknown. While some studies have found associations between musical training in childhood and later nonmusical cognitive outcomes, few randomized controlled trials (RCTs) have been employed to assess causal effects of music lessons on child cognition and no clear pattern of results has emerged. We conducted two RCTs with preschool children investigating the cognitive effects of a brief series of music classes, as compared to a similar but non-musical form of arts instruction (visual arts classes, Experiment 1) or to a no-treatment control (Experiment 2). Consistent with typical preschool arts enrichment programs, parents attended classes with their children, participating in a variety of developmentally appropriate arts activities. After six weeks of class, we assessed children's skills in four distinct cognitive areas in which older arts-trained students have been reported to excel: spatial-navigational reasoning, visual form analysis, numerical discrimination, and receptive vocabulary. We initially found that children from the music class showed greater spatial-navigational ability than did children from the visual arts class, while children from the visual arts class showed greater visual form analysis ability than children from the music class (Experiment 1). However, a partial replication attempt comparing music training to a no-treatment control failed to confirm these findings (Experiment 2), and the combined results of the two experiments were negative: overall, children provided with music classes performed no better than those with visual arts or no classes on any assessment. Our findings underscore the need for replication in RCTs, and suggest caution in interpreting the positive findings from past studies of cognitive effects of music instruction. PMID:24349171

Publications - GMC 359 | Alaska Division of Geological & Geophysical

Science.gov Websites

of Geological & Geophysical Surveys Comments: Raw data provided in excel table. Chromatograms gmc359.pdf (294.0 K) Excel Data Table(s) gmc359.xls (332.0 K) Keywords Geochemical Data Top of Page

A tutorial on the use of Excel 2010 and Excel for Mac 2011 for conducting delay-discounting analyses.

PubMed

Reed, Derek D; Kaplan, Brent A; Brewer, Adam T

2012-01-01

In recent years, researchers and practitioners in the behavioral sciences have profited from a growing literature on delay discounting. The purpose of this article is to provide readers with a brief tutorial on how to use Microsoft Office Excel 2010 and Excel for Mac 2011 to analyze discounting data to yield parameters for both the hyperbolic discounting model and area under the curve. This tutorial is intended to encourage the quantitative analysis of behavior in both research and applied settings by readers with relatively little formal training in nonlinear regression.

A TUTORIAL ON THE USE OF EXCEL 2010 AND EXCEL FOR MAC 2011 FOR CONDUCTING DELAY-DISCOUNTING ANALYSES

PubMed Central

Reed, Derek D; Kaplan, Brent A; Brewer, Adam T

2012-01-01

In recent years, researchers and practitioners in the behavioral sciences have profited from a growing literature on delay discounting. The purpose of this article is to provide readers with a brief tutorial on how to use Microsoft Office Excel 2010 and Excel for Mac 2011 to analyze discounting data to yield parameters for both the hyperbolic discounting model and area under the curve. This tutorial is intended to encourage the quantitative analysis of behavior in both research and applied settings by readers with relatively little formal training in nonlinear regression. PMID:22844143

Topography-based analysis of Hurricane Katrina inundation of New Orleans: Chapter 3G in Science and the storms-the USGS response to the hurricanes of 2005

USGS Publications Warehouse

Gesch, Dean

2007-01-01

The ready availability of high-resolution, high-accuracy elevation data proved valuable for development of topographybased products to determine rough estimates of the inundation of New Orleans, La., from Hurricane Katrina. Because of its high level of spatial detail and vertical accuracy of elevation measurements, light detection and ranging (lidar) remote sensing is an excellent mapping technology for use in low-relief hurricane-prone coastal areas.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ding, Shunmin; Tian, Chengcheng; Zhu, Xiang

Transition-metal-catalyzed cyanation of aryl halides is a common route to benzonitriles, which are integral to many industrial procedures. However, traditional homogeneous catalysts for such processes are expensive and suffer poor recyclability, so a heterogeneous analogue is highly desired. A novel spatial modulation approach has been developed in this paper to fabricate a heterogeneous Pd-metalated nanoporous polymer, which catalyzes the cyanation of aryl halides without need for ligands. Finally, the catalyst displays high activity in the synthesis of benzonitriles, including high product yields, excellent stability and recycling, and broad functional-group tolerance.

Dynamic load balancing algorithm for molecular dynamics based on Voronoi cells domain decompositions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fattebert, J.-L.; Richards, D.F.; Glosli, J.N.

2012-12-01

We present a new algorithm for automatic parallel load balancing in classical molecular dynamics. It assumes a spatial domain decomposition of particles into Voronoi cells. It is a gradient method which attempts to minimize a cost function by displacing Voronoi sites associated with each processor/sub-domain along steepest descent directions. Excellent load balance has been obtained for quasi-2D and 3D practical applications, with up to 440·10 6 particles on 65,536 MPI tasks.

ROLES OF REMOTE SENSING AND CARTOGRAPHY IN THE USGS NATIONAL MAPPING DIVISION.

USGS Publications Warehouse

Southard, Rupert B.; Salisbury, John W.

1983-01-01

The inseparable roles of remote sensing and photogrammetry have been recognized to be consistent with the aims and interests of the American Society of Photogrammetry. In particular, spatial data storage, data merging and manipulation methods and other techniques originally developed for remote sensing applications also have applications for digital cartography. Also, with the introduction of much improved digital processing techniques, even relatively low resolution (80 m) traditional Landsat images can now be digitally mosaicked into excellent quality 1:250,000-scale image maps.

Dynamic microscale temperature gradient in a gold nanorod solution measured by diffraction-limited nanothermometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Li, Chengmingyue; Gan, Xiaosong; Li, Xiangping

2015-09-21

We quantify the dynamic microscale temperature gradient in a gold nanorod solution using quantum-dot-based microscopic fluorescence nanothermometry. By incorporating CdSe quantum dots into the solution as a nanothermometer, precise temperature mapping with diffraction-limited spatial resolution and sub-degree temperature resolution is achieved. The acquired data on heat generation and dissipation show an excellent agreement with theoretical simulations. This work reveals an effective approach for noninvasive temperature regulation with localized nanoheaters in microfluidic environment.

Remote sensing fusion based on guided image filtering

NASA Astrophysics Data System (ADS)

Zhao, Wenfei; Dai, Qinling; Wang, Leiguang

2015-12-01

In this paper, we propose a novel remote sensing fusion approach based on guided image filtering. The fused images can well preserve the spectral features of the original multispectral (MS) images, meanwhile, enhance the spatial details information. Four quality assessment indexes are also introduced to evaluate the fusion effect when compared with other fusion methods. Experiments carried out on Gaofen-2, QuickBird, WorldView-2 and Landsat-8 images. And the results show an excellent performance of the proposed method.

FINAL REPORT

DOE Office of Scientific and Technical Information (OSTI.GOV)

PETER, GARY F.

2014-07-16

Excellent progress was made in standardizing three complementary methods: Magnetic resonance imaging, x-ray micro CT, and MALDI imaging linear ion trap mass spectroscopy to image biomass and chemical, anatomical and functional changes that occur during pretreatment and hydrolysis. Magnetic resonance microscopy provides excellent images with as low as 5 uM resolution with hydrated biomass samples. We visualized dramatic changes in signal associated with the hydrolysis of the carbohydrates by strong acids. Quantitative diffusion approaches were used to probe more subtle structural changes in biomass. Diffusion tensor calculations reflect diffusion anisotropy and fractional anisotropy maps clearly show the longer range diffusionmore » within the vessels compared to within the fiber cells. The diffusion is increased along the cell walls of the vessels. Suggesting that further research with NMR imaging should be pursued. X-ray CT provides excellent images at as low as 3.5 uM resolution from dried biomass. Small increases in surface area, and decreases in local density have been quantified in with wood after mild pretreatments; these changes are expected to be underestimates of the hydrated wood, due to the ~12% shrinkage that occurs upon drying untreated wood. MALDI-MS spectra show high ion intensities at most mass to charge ratios in untreated and pretreated woody material. MALDI-MSn is required to improve specificity and reduce background for imaging. MALDI-TOF is not specific enough for carbohydrate identification. Using MALDI-LIT/MSn we can readily identify oligomeric glucans and xylans and their fragmentation patterns as well as those of the glucuronic acid side chains of birch 4-O-methyl glucuronxylan. Imaging of glucan and xylan oligomers show that many contain isobaric ions with different distributions, indicating again that MSn is needed for accurate imaging of lignocellulosic materials. We are now starting to integrate the three imaging methods by using the same set of biomass samples imaged with all three methods, and using common analytical software to quantify parameters from the three dimensional images. In addition to the proposed experiments, we conducted imaging studies with a novel TOF-SIMS instrument available through collaborations with the AMOLF goup led by Ron Heeren at the FOM Institute in Amersterdam, Netherlands. ToF-SIMS was used to image intact cross sections of Populus stems with high spatial resolution, chemically selectivity. ToF-SIMS images were correlated with fluorescence microscopy which allowed for more positive ion identification.« less

Fiber transport of spatially entangled photons

NASA Astrophysics Data System (ADS)

Löffler, W.; Eliel, E. R.; Woerdman, J. P.; Euser, T. G.; Scharrer, M.; Russell, P.

2012-03-01

High-dimensional entangled photons pairs are interesting for quantum information and cryptography: Compared to the well-known 2D polarization case, the stronger non-local quantum correlations could improve noise resistance or security, and the larger amount of information per photon increases the available bandwidth. One implementation is to use entanglement in the spatial degree of freedom of twin photons created by spontaneous parametric down-conversion, which is equivalent to orbital angular momentum entanglement, this has been proven to be an excellent model system. The use of optical fiber technology for distribution of such photons has only very recently been practically demonstrated and is of fundamental and applied interest. It poses a big challenge compared to the established time and frequency domain methods: For spatially entangled photons, fiber transport requires the use of multimode fibers, and mode coupling and intermodal dispersion therein must be minimized not to destroy the spatial quantum correlations. We demonstrate that these shortcomings of conventional multimode fibers can be overcome by using a hollow-core photonic crystal fiber, which follows the paradigm to mimic free-space transport as good as possible, and are able to confirm entanglement of the fiber-transported photons. Fiber transport of spatially entangled photons is largely unexplored yet, therefore we discuss the main complications, the interplay of intermodal dispersion and mode mixing, the influence of external stress and core deformations, and consider the pros and cons of various fiber types.

Quantum image median filtering in the spatial domain

NASA Astrophysics Data System (ADS)

Li, Panchi; Liu, Xiande; Xiao, Hong

2018-03-01

Spatial filtering is one principal tool used in image processing for a broad spectrum of applications. Median filtering has become a prominent representation of spatial filtering because its performance in noise reduction is excellent. Although filtering of quantum images in the frequency domain has been described in the literature, and there is a one-to-one correspondence between linear spatial filters and filters in the frequency domain, median filtering is a nonlinear process that cannot be achieved in the frequency domain. We therefore investigated the spatial filtering of quantum image, focusing on the design method of the quantum median filter and applications in image de-noising. To this end, first, we presented the quantum circuits for three basic modules (i.e., Cycle Shift, Comparator, and Swap), and then, we design two composite modules (i.e., Sort and Median Calculation). We next constructed a complete quantum circuit that implements the median filtering task and present the results of several simulation experiments on some grayscale images with different noise patterns. Although experimental results show that the proposed scheme has almost the same noise suppression capacity as its classical counterpart, the complexity analysis shows that the proposed scheme can reduce the computational complexity of the classical median filter from the exponential function of image size n to the second-order polynomial function of image size n, so that the classical method can be speeded up.

Leading Others Toward Excellence.

PubMed

Hupp, James R

2015-12-01

This essay puts forth the proposition that academic program excellence does not arise by accident. Effective leadership is required. To support this proposition, the essay discusses the characteristics common to effective leaders. It then proceeds to use the example of a successful academic oral-maxillofacial surgery department and characteristics of its leader to provide evidence that excellence derives from effective leadership. Copyright © 2015 American Association of Oral and Maxillofacial Surgeons. Published by Elsevier Inc. All rights reserved.

Climate variability and human impact in South America during the last 2000 years: synthesis and perspectives from pollen records

NASA Astrophysics Data System (ADS)

Flantua, S. G. A.; Hooghiemstra, H.; Vuille, M.; Behling, H.; Carson, J. F.; Gosling, W. D.; Hoyos, I.; Ledru, M. P.; Montoya, E.; Mayle, F.; Maldonado, A.; Rull, V.; Tonello, M. S.; Whitney, B. S.; González-Arango, C.

2016-02-01

An improved understanding of present-day climate variability and change relies on high-quality data sets from the past 2 millennia. Global efforts to model regional climate modes are in the process of being validated against, and integrated with, records of past vegetation change. For South America, however, the full potential of vegetation records for evaluating and improving climate models has hitherto not been sufficiently acknowledged due to an absence of information on the spatial and temporal coverage of study sites. This paper therefore serves as a guide to high-quality pollen records that capture environmental variability during the last 2 millennia. We identify 60 vegetation (pollen) records from across South America which satisfy geochronological requirements set out for climate modelling, and we discuss their sensitivity to the spatial signature of climate modes throughout the continent. Diverse patterns of vegetation response to climate change are observed, with more similar patterns of change in the lowlands and varying intensity and direction of responses in the highlands. Pollen records display local-scale responses to climate modes; thus, it is necessary to understand how vegetation-climate interactions might diverge under variable settings. We provide a qualitative translation from pollen metrics to climate variables. Additionally, pollen is an excellent indicator of human impact through time. We discuss evidence for human land use in pollen records and provide an overview considered useful for archaeological hypothesis testing and important in distinguishing natural from anthropogenically driven vegetation change. We stress the need for the palynological community to be more familiar with climate variability patterns to correctly attribute the potential causes of observed vegetation dynamics. This manuscript forms part of the wider LOng-Term multi-proxy climate REconstructions and Dynamics in South America - 2k initiative that provides the ideal framework for the integration of the various palaeoclimatic subdisciplines and palaeo-science, thereby jump-starting and fostering multidisciplinary research into environmental change on centennial and millennial timescales.

Optimization of air gap for two-dimensional imaging system using synchrotron radiation

NASA Astrophysics Data System (ADS)

Zeniya, Tsutomu; Takeda, Tohoru; Yu, Quanwen; Hyodo, Kazuyuki; Yuasa, Tetsuya; Aiyoshi, Yuji; Hiranaka, Yukio; Itai, Yuji; Akatsuka, Takao

2000-11-01

Since synchrotron radiation (SR) has several excellent properties such as high brilliance, broad continuous energy spectrum and small divergence, we can obtain x-ray images with high contrast and high spatial resolution by using of SR. In 2D imaging using SR, air gap method is very effective to reduce the scatter contamination. However, to use air gap method, the geometrical effect of finite source size of SR must be considered because spatial resolution of image is degraded by air gap. For 2D x-ray imaging with SR, x-ray mammography was chosen to examine the effect of air gap method. We theoretically discussed the optimization of air gap distance suing effective scatter point source model proposed by Muntz, and executed experiment with a newly manufactured monochromator with asymmetrical reflection and an imaging plate.

Optimization of an ultralow-dose high-resolution pediatric PET scanner design based on monolithic scintillators with dual-sided digital SiPM readout: a simulation study

NASA Astrophysics Data System (ADS)

Mikhaylova, Ekaterina; Tabacchini, Valerio; Borghi, Giacomo; Mollet, Pieter; D'Hoe, Ester; Schaart, Dennis R.; Vandenberghe, Stefaan

2017-11-01

The goal of this simulation study is the performance evaluation and comparison of six potential designs for a time-of-flight PET scanner for pediatric patients of up to about 12 years of age. It is designed to have a high sensitivity and provide high-contrast and high-resolution images. The simulated pediatric PET is a full ring scanner, consisting of 32  ×  32 mm2 monolithic LYSO:Ce crystals coupled to digital silicon photomultiplier arrays. The six considered designs differ in axial lengths (27.2 cm, 54.4 cm and 102 cm) and crystal thicknesses (22 mm and 11 mm). The simulations are based on measured detector response data. We study two possible detector arrangements: 22 mm-thick crystals with dual-sided readout and 11 mm-thick crystals with back-sided readout. The six designs are simulated by means of the GEANT4 application for tomographic emission software, using the measured spatial, energy and time response of the monolithic scintillator detectors as input. The performance of the six designs is compared on the basis of four studies: (1) spatial resolution; (2) NEMA NU2-2012 sensitivity and scatter fraction (SF) tests; (3) non-prewhitening signal-to-noise ratio observer study; and (4) receiver operating characteristics analysis. Based on the results, two designs are identified as cost-effective solutions for fast and efficient imaging of children: one with 54.4 cm axial field-of-view (FOV) and 22 mm-thick crystals, and another one with 102 cm axial FOV and 11 cm-thick crystals. The first one has a higher center point sensitivity than the second one, but requires dual-sided readout. The second design has the advantage of allowing a whole-body scan in a single bed position acquisition. Both designs have the potential to provide an excellent spatial resolution (˜2 mm) and an ultra-high sensitivity (>100 cps kBq-1 ).

Spatial Thinking and Visualisation of Real-World Concepts using GeoMapApp

NASA Astrophysics Data System (ADS)

Goodwillie, A. M.

2015-12-01

Commonly, geoscience data is presented to students in the lab and classroom in the form of data tables, maps and graphs. Successful data interpretation requires learners to become proficient with spatial thinking skills, allowing them to gain insight and understanding of the underlying real-world 3-D processes and concepts. Yet, educators at both the school and university level often witness students having difficulty in performing that translation. As a result, tools and resources that help to bridge that spatial capability gap can have useful application in the educational realm. A free, map-based data discovery and visualisation tool developed with NSF funding at Lamont-Doherty Earth Observatory caters to students and teachers alike by providing a variety of data display and manipulation techniques that enhance geospatial awareness. Called GeoMapApp (http://www.geomapapp.org), the tool provides access to hundreds of built-in authentic geoscience data sets. Examples include earthquake and volcano data, geological maps, lithospheric plate boundary information, geochemical, oceanographic, and environmental data. Barriers to entry are lowered through easy installation, seamless integration of research-grade data sets, intuitive menus, and project-saving continuity. The default base map is a cutting-edge elevation model covering the oceans and land. Dynamic contouring, artificial illumination, 3-D visualisations, data point manipulations, cross-sectional profiles, and other display techniques help students grasp the content and geospatial context of data. Data sets can also be layered for easier comparison. Students may import their own data sets in Excel, ASCII, shapefile, and gridded format, and they can gain a sense of ownership by being able to tailor their data explorations and save their own projects. GeoMapApp is adaptable to a range of learning environments from lab sessions, group projects, and homework assignments to in-class pop-ups. A new Save Session function allows educators to preserve a pre-loaded state of GeoMapApp. When shared with a class, the saved file allows every student to open GeoMapApp at exactly the same starting point from which to begin their data explorations. A wide range of enquiry-driven education modules for GeoMapApp is already available at SERC.

Laboratory and semi-field evaluations of two (transfluthrin) spatial repellent devices against Aedes aegypti (L.) (Diptera: Culicidae).

PubMed

McPhatter, Lee P; Mischler, Paula D; Webb, Meiling Z; Chauhan, Kamal; Lindroth, Erica J; Richardson, Alec G; Debboun, Mustapha

2017-01-01

Two transfluthrin-based spatial repellent products (Raid Dual Action Insect Repellent and Home Freshener and Raid Shield (currently not commercially available), SC Johnson, Racine WI) were evaluated for spatial repellent effects against female Aedes aegypti (L.) mosquitoes under laboratory (wind tunnel) and semi-field (outdoor enclosure) conditions. The placement of either product in the wind tunnel significantly reduced host-seeking behaviors. The mean baseline (control) landing counts for the Raid Dual Action and Raid Shield were reduced by 95% and 74% respectively. Mean probing counts for the Raid Dual Action were reduced by 95%, while the probing counts for the Raid Shield were decreased by 69%. Baseline blood-feeding success was significantly reduced for both treatments: Raid Dual Action (100%) and Raid Shield (96%). Semi-field evaluations were conducted in outdoor enclosures at the Navy Entomology Center of Excellence, Jacksonville, Florida. A moderate reduction in mosquito entry into military style tents resulted when either product was placed near the tent opening. The Raid Shield reduced mosquito entry into tents by 88%, while the Dual Action decreased entry by 66%.

Validity and reliability of an online visual-spatial working memory task for self-reliant administration in school-aged children.

PubMed

Van de Weijer-Bergsma, Eva; Kroesbergen, Evelyn H; Prast, Emilie J; Van Luit, Johannes E H

2015-09-01

Working memory is an important predictor of academic performance, and of math performance in particular. Most working memory tasks depend on one-to-one administration by a testing assistant, which makes the use of such tasks in large-scale studies time-consuming and costly. Therefore, an online, self-reliant visual-spatial working memory task (the Lion game) was developed for primary school children (6-12 years of age). In two studies, the validity and reliability of the Lion game were investigated. The results from Study 1 (n = 442) indicated satisfactory six-week test-retest reliability, excellent internal consistency, and good concurrent and predictive validity. The results from Study 2 (n = 5,059) confirmed the results on the internal consistency and predictive validity of the Lion game. In addition, multilevel analysis revealed that classroom membership influenced Lion game scores. We concluded that the Lion game is a valid and reliable instrument for the online computerized and self-reliant measurement of visual-spatial working memory (i.e., updating).

EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation

PubMed Central

Amidi, Afshine; Megalooikonomou, Vasileios; Paragios, Nikos

2018-01-01

During the past decade, with the significant progress of computational power as well as ever-rising data availability, deep learning techniques became increasingly popular due to their excellent performance on computer vision problems. The size of the Protein Data Bank (PDB) has increased more than 15-fold since 1999, which enabled the expansion of models that aim at predicting enzymatic function via their amino acid composition. Amino acid sequence, however, is less conserved in nature than protein structure and therefore considered a less reliable predictor of protein function. This paper presents EnzyNet, a novel 3D convolutional neural networks classifier that predicts the Enzyme Commission number of enzymes based only on their voxel-based spatial structure. The spatial distribution of biochemical properties was also examined as complementary information. The two-layer architecture was investigated on a large dataset of 63,558 enzymes from the PDB and achieved an accuracy of 78.4% by exploiting only the binary representation of the protein shape. Code and datasets are available at https://github.com/shervinea/enzynet. PMID:29740518

EnzyNet: enzyme classification using 3D convolutional neural networks on spatial representation.

PubMed

Amidi, Afshine; Amidi, Shervine; Vlachakis, Dimitrios; Megalooikonomou, Vasileios; Paragios, Nikos; Zacharaki, Evangelia I

2018-01-01

During the past decade, with the significant progress of computational power as well as ever-rising data availability, deep learning techniques became increasingly popular due to their excellent performance on computer vision problems. The size of the Protein Data Bank (PDB) has increased more than 15-fold since 1999, which enabled the expansion of models that aim at predicting enzymatic function via their amino acid composition. Amino acid sequence, however, is less conserved in nature than protein structure and therefore considered a less reliable predictor of protein function. This paper presents EnzyNet, a novel 3D convolutional neural networks classifier that predicts the Enzyme Commission number of enzymes based only on their voxel-based spatial structure. The spatial distribution of biochemical properties was also examined as complementary information. The two-layer architecture was investigated on a large dataset of 63,558 enzymes from the PDB and achieved an accuracy of 78.4% by exploiting only the binary representation of the protein shape. Code and datasets are available at https://github.com/shervinea/enzynet.

LANL Multiyear Strategy Performance Improvement (MYSPI), Fiscal Years 2018-2022

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leasure, Craig Scott

Los Alamos National Laboratory (LANL) protects the nation and the world using innovative science, technology, and engineering through an integrated approach that harnesses the strength of our people, capabilities, and operations. The Laboratory’s Strategic Plan and Purpose statement provide the framework for scientific excellence and operational excellence now and in the future. Our Strategic Plan and Purpose help position Los Alamos for continuing mission success that ensures the safety, security, and effectiveness of the nation’s deterrent; protects the nation from nuclear and emerging threats through our larger global security missions; provides energy security to the nation; and ensures that themore » nation’s scientific reputation and capabilities remain robust enough to assure our allies and deter our adversaries. Moreover, we use these principles and guidance to ensure that Los Alamos is successful in attracting, recruiting, and retaining the next generation of excellent talent, while creating an efficient, environmentally responsible workplace that provides our employees with access to modern scientific tools and resources. Using this guidance and its underlying principles, we are continuing to restore credibility and operational effectiveness to the Laboratory, deliver mission success and continuing scientific excellence, and protect our employees and the nation’s secrets.« less

REAL-PANLAR Project for the Implementation and Accreditation of Centers of Excellence in Rheumatoid Arthritis Throughout Latin America: A Consensus Position Paper From REAL-PANLAR Group on Improvement of Rheumatoid Arthritis Care in Latin America Establishing Centers of Excellence.

PubMed

Santos-Moreno, Pedro; Galarza-Maldonado, Claudio; Caballero-Uribe, Carlo V; Cardiel, Mario H; Massardo, Loreto; Soriano, Enrique R; Olano, José Aguilar; Díaz Coto, José F; Durán Pozo, Gabriel R; da Silveira, Inês Guimarães; de Castrejón, Vianna J Khoury; Pérez, Leticia Lino; Méndez Justo, Carlos A; Montufar Guardado, Rubén A; Muños, Rafael; Elvir, Sergio Murillo; Paredes Domínguez, Ernesto R; Pons-Estel, Bernardo; Ríos Acosta, Carlos R; Sandino, Sayonara; Toro Gutiérrez, Carlos E; Villegas de Morales, Sol María; Pineda, Carlos

2015-06-01

A consensus meeting of representatives of 16 Latin American and Caribbean countries and the REAL-PANLAR group met in the city of Bogota to provide recommendations for improving quality of care of patients with rheumatoid arthritis (RA) in Latin America, defining a minimum standards of care and the concept of center of excellence in RA. Twenty-two rheumatologists from 16 Latin American countries with a special interest in quality of care in RA participated in the consensus meeting. Two RA Colombian patients and 2 health care excellence advisors were also invited to the meeting. A RAND-modified Delphi procedure of 5 steps was applied to define categories of centers of excellence. During a 1-day meeting, working groups were created in order to discuss and validate the minimum quality-of-care standards for the 3 proposed types of centers of excellence in RA. Positive votes from at least 60% of the attending leaders were required for the approval of each standard. Twenty-two opinion leaders from the PANLAR countries and the REAL-PANLAR group participated in the discussion and definition of the standards. One hundred percent of the participants agreed with setting up centers of excellence in RA throughout Latin America. Three types of centers of excellence and its criteria were defined, according to indicators of structure, processes, and outcomes: standard, optimal, and model. The standard level should have basic structure and process indicators, the intermediate or optimal level should accomplish more structure and process indicators, and model level should also fulfill outcome indicators and patient experience. This is the first Latin American effort to standardize and harmonize the treatment provided to RA patients and to establish centers of excellence that would offer to RA patients acceptable clinical results and high levels of safety.

Creating single-subject design graphs in Microsoft Excel 2007.

PubMed

Dixon, Mark R; Jackson, James W; Small, Stacey L; Horner-King, Mollie J; Lik, Nicholas Mui Ker; Garcia, Yors; Rosales, Rocio

2009-01-01

Over 10 years have passed since the publication of Carr and Burkholder's (1998) technical article on how to construct single-subject graphs using Microsoft Excel. Over the course of the past decade, the Excel program has undergone a series of revisions that make the Carr and Burkholder paper somewhat difficult to follow with newer versions. The present article provides task analyses for constructing various types of commonly used single-subject design graphs in Microsoft Excel 2007. The task analyses were evaluated using a between-subjects design that compared the graphing skills of 22 behavior-analytic graduate students using Excel 2007 and either the Carr and Burkholder or newly developed task analyses. Results indicate that the new task analyses yielded more accurate and faster graph construction than the Carr and Burkholder instructions.

Phase-change lines, scale breaks, and trend lines using Excel 2013.

PubMed

Deochand, Neil; Costello, Mack S; Fuqua, R Wayne

2015-01-01

The development of graphing skills for behavior analysts is an ongoing process. Specialized graphing software is often expensive, is not widely disseminated, and may require specific training. Dixon et al. (2009) provided an updated task analysis for graph making in the widely used platform Excel 2007. Vanselow and Bourret (2012) provided online tutorials that outline some alternate methods also using Office 2007. This article serves as an update to those task analyses and includes some alternative and underutilized methods in Excel 2013. To examine the utility of our recommendations, 12 psychology graduate students were presented with the task analyses, and the experimenters evaluated their performance and noted feedback. The task analyses were rated favorably. © Society for the Experimental Analysis of Behavior.

Modeling and Compensating Temperature-Dependent Non-Uniformity Noise in IR Microbolometer Cameras

PubMed Central

Wolf, Alejandro; Pezoa, Jorge E.; Figueroa, Miguel

2016-01-01

Images rendered by uncooled microbolometer-based infrared (IR) cameras are severely degraded by the spatial non-uniformity (NU) noise. The NU noise imposes a fixed-pattern over the true images, and the intensity of the pattern changes with time due to the temperature instability of such cameras. In this paper, we present a novel model and a compensation algorithm for the spatial NU noise and its temperature-dependent variations. The model separates the NU noise into two components: a constant term, which corresponds to a set of NU parameters determining the spatial structure of the noise, and a dynamic term, which scales linearly with the fluctuations of the temperature surrounding the array of microbolometers. We use a black-body radiator and samples of the temperature surrounding the IR array to offline characterize both the constant and the temperature-dependent NU noise parameters. Next, the temperature-dependent variations are estimated online using both a spatially uniform Hammerstein-Wiener estimator and a pixelwise least mean squares (LMS) estimator. We compensate for the NU noise in IR images from two long-wave IR cameras. Results show an excellent NU correction performance and a root mean square error of less than 0.25 ∘C, when the array’s temperature varies by approximately 15 ∘C. PMID:27447637

Spatial averaging of oceanic rainfall variability using underwater sound: Ionian Sea rainfall experiment 2004.

PubMed

Nystuen, Jeffrey A; Amitai, Eyal; Anagnostou, Emmanuel N; Anagnostou, Marios N

2008-04-01

An experiment to evaluate the inherent spatial averaging of the underwater acoustic signal from rainfall was conducted in the winter of 2004 in the Ionian Sea southwest of Greece. A mooring with four passive aquatic listeners (PALs) at 60, 200, 1000, and 2000 m was deployed at 36.85 degrees N, 21.52 degrees E, 17 km west of a dual-polarization X-band coastal radar at Methoni, Greece. The acoustic signal is classified into wind, rain, shipping, and whale categories. It is similar at all depths and rainfall is detected at all depths. A signal that is consistent with the clicking of deep-diving beaked whales is present 2% of the time, although there was no visual confirmation of whale presence. Co-detection of rainfall with the radar verifies that the acoustic detection of rainfall is excellent. Once detection is made, the correlation between acoustic and radar rainfall rates is high. Spatial averaging of the radar rainfall rates in concentric circles over the mooring verifies the larger inherent spatial averaging of the rainfall signal with recording depth. For the PAL at 2000 m, the maximum correlation was at 3-4 km, suggesting a listening area for the acoustic rainfall measurement of roughly 30-50 km(2).

Variation of Accumulation Rates Over the Last Eight Centuries on the East Antarctic Plateau Derived from Volcanic Signals in Ice Cores

NASA Technical Reports Server (NTRS)

Anschuetz, H.; Sinisalo, A.; Isaksson, E.; McConnell, J. R.; Hamran, S.-E.; Bisiaux, M. M.; Pasteris, D.; Neumann, T. A.; Winther, J.-G.

2011-01-01

Volcanic signatures in ice-core records provide an excellent means to date the cores and obtain information about accumulation rates. From several ice cores it is thus possible to extract a spatio-temporal accumulation pattern. We show records of electrical conductivity and sulfur from firn cores from the Norwegian-USA scientific traverse during the International Polar Year 2007-2009 (IPY) through East Antarctica. Major volcanic eruptions are identified and used to assess century-scale accumulation changes. The largest changes seem to occur in the most recent decades with accumulation over the period 1963- 2007/08 being up to 25 % different from the long-term record. There is no clear overall trend, some sites show an increase in accumulation over the period 1963 to present while others show a decrease. Almost all of the sites above 3200 m above sea level (asl) suggest a decrease. These sites also show a significantly lower accumulation value than large-scale assessments both for the period 1963 to present and for the long-term mean at the respective drill sites. The spatial accumulation distribution is influenced mainly by elevation and distance to the ocean (continentality), as expected. Ground-penetrating radar data around the drill sites show a spatial variability within 10-20 % over several tens of kilometers, indicating that our drill sites are well representative for the area around them. Our results are important for large-scale assessments of Antarctic mass balance and model validation.

Hyperspectral laser-induced autofluorescence imaging of dental caries

NASA Astrophysics Data System (ADS)

Bürmen, Miran; Fidler, Aleš; Pernuš, Franjo; Likar, Boštjan

2012-01-01

Dental caries is a disease characterized by demineralization of enamel crystals leading to the penetration of bacteria into the dentine and pulp. Early detection of enamel demineralization resulting in increased enamel porosity, commonly known as white spots, is a difficult diagnostic task. Laser induced autofluorescence was shown to be a useful method for early detection of demineralization. The existing studies involved either a single point spectroscopic measurements or imaging at a single spectral band. In the case of spectroscopic measurements, very little or no spatial information is acquired and the measured autofluorescence signal strongly depends on the position and orientation of the probe. On the other hand, single-band spectral imaging can be substantially affected by local spectral artefacts. Such effects can significantly interfere with automated methods for detection of early caries lesions. In contrast, hyperspectral imaging effectively combines the spatial information of imaging methods with the spectral information of spectroscopic methods providing excellent basis for development of robust and reliable algorithms for automated classification and analysis of hard dental tissues. In this paper, we employ 405 nm laser excitation of natural caries lesions. The fluorescence signal is acquired by a state-of-the-art hyperspectral imaging system consisting of a high-resolution acousto-optic tunable filter (AOTF) and a highly sensitive Scientific CMOS camera in the spectral range from 550 nm to 800 nm. The results are compared to the contrast obtained by near-infrared hyperspectral imaging technique employed in the existing studies on early detection of dental caries.

Functional Magnetic Resonance Imaging and Functional Near-Infrared Spectroscopy: Insights from Combined Recording Studies

PubMed Central

Scarapicchia, Vanessa; Brown, Cassandra; Mayo, Chantel; Gawryluk, Jodie R.

2017-01-01

Although blood oxygen level dependent (BOLD) functional magnetic resonance imaging (fMRI) is a widely available, non-invasive technique that offers excellent spatial resolution, it remains limited by practical constraints imposed by the scanner environment. More recently, functional near infrared spectroscopy (fNIRS) has emerged as an alternative hemodynamic-based approach that possesses a number of strengths where fMRI is limited, most notably in portability and higher tolerance for motion. To date, fNIRS has shown promise in its ability to shed light on the functioning of the human brain in populations and contexts previously inaccessible to fMRI. Notable contributions include infant neuroimaging studies and studies examining full-body behaviors, such as exercise. However, much like fMRI, fNIRS has technical constraints that have limited its application to clinical settings, including a lower spatial resolution and limited depth of recording. Thus, by combining fMRI and fNIRS in such a way that the two methods complement each other, a multimodal imaging approach may allow for more complex research paradigms than is feasible with either technique alone. In light of these issues, the purpose of the current review is to: (1) provide an overview of fMRI and fNIRS and their associated strengths and limitations; (2) review existing combined fMRI-fNIRS recording studies; and (3) discuss how their combined use in future research practices may aid in advancing modern investigations of human brain function. PMID:28867998

Combining remote sensing and water-balance evapotranspiration estimates for the conterminous United States

USGS Publications Warehouse

Reitz, Meredith; Senay, Gabriel; Sanford, Ward E.

2017-01-01

Evapotranspiration (ET) is a key component of the hydrologic cycle, accounting for ~70% of precipitation in the conterminous U.S. (CONUS), but it has been a challenge to predict accurately across different spatio-temporal scales. The increasing availability of remotely sensed data has led to significant advances in the frequency and spatial resolution of ET estimates, derived from energy balance principles with variables such as temperature used to estimate surface latent heat flux. Although remote sensing methods excel at depicting spatial and temporal variability, estimation of ET independently of other water budget components can lead to inconsistency with other budget terms. Methods that rely on ground-based data better constrain long-term ET, but are unable to provide the same temporal resolution. Here we combine long-term ET estimates from a water-balance approach with the SSEBop (operational Simplified Surface Energy Balance) remote sensing-based ET product for 2000–2015. We test the new combined method, the original SSEBop product, and another remote sensing ET product (MOD16) against monthly measurements from 119 flux towers. The new product showed advantages especially in non-irrigated areas where the new method showed a coefficient of determination R2 of 0.44, compared to 0.41 for SSEBop or 0.35 for MOD16. The resulting monthly data set will be a useful, unique contribution to ET estimation, due to its combination of remote sensing-based variability and ground-based long-term water balance constraints.

Quantification of microscopic surface features of single point diamond turned optics with subsequent chemical polishing

NASA Astrophysics Data System (ADS)

Cardenas, Nelson; Kyrish, Matthew; Taylor, Daniel; Fraelich, Margaret; Lechuga, Oscar; Claytor, Richard; Claytor, Nelson

2015-03-01

Electro-Chemical Polishing is routinely used in the anodizing industry to achieve specular surface finishes of various metals products prior to anodizing. Electro-Chemical polishing functions by leveling the microscopic peaks and valleys of the substrate, thereby increasing specularity and reducing light scattering. The rate of attack is dependent of the physical characteristics (height, depth, and width) of the microscopic structures that constitute the surface finish. To prepare the sample, mechanical polishing such as buffing or grinding is typically required before etching. This type of mechanical polishing produces random microscopic structures at varying depths and widths, thus the electropolishing parameters are determined in an ad hoc basis. Alternatively, single point diamond turning offers excellent repeatability and highly specific control of substrate polishing parameters. While polishing, the diamond tool leaves behind an associated tool mark, which is related to the diamond tool geometry and machining parameters. Machine parameters such as tool cutting depth, speed and step over can be changed in situ, thus providing control of the spatial frequency of the microscopic structures characteristic of the surface topography of the substrate. By combining single point diamond turning with subsequent electro-chemical etching, ultra smooth polishing of both rotationally symmetric and free form mirrors and molds is possible. Additionally, machining parameters can be set to optimize post polishing for increased surface quality and reduced processing times. In this work, we present a study of substrate surface finish based on diamond turning tool mark spatial frequency with subsequent electro-chemical polishing.

Profiling of differentially expressed genes critical to storage root development in hydroponically and in-vitro grown sweetpotato for space farming

NASA Astrophysics Data System (ADS)

Egnin, M.; Gao, H.; He, G.; Woullard, F.; Mortley, D.; Scoffield, J.; Bey, B.; Quain, M.; Prakash, C. S.; Bonsi, C.

Environment is known to have significant effects on the nutrient content and quality of crop plants especially through its impact on the temporal and spatial expression of genes Little is known about the molecular changes and harvest index in plants in response to microgravity Sweetpotato underline Ipomoea underline batatas L Lam is one of the most important root crops and an excellent NASA crop for space farming to provide essential nutrients to sustain human life on long-term space missions The initiation and development of storage root formation is one of the most critical processes determining yield of sweetpotato The molecular mechanism of storage root initiation and development in sweetpotato is poorly understood To this end knowledge of gravity perception the genetic and molecular nature of the induction process of storage root will tremendously help improve on sweetpotato harvest index for space farming cDNA-AFLP techniques were employed to investigate temporal and spatial expressions to gain molecular insights and identify transcripts differentially expressed during early stages of sweetpotato storage root development Two hydroponically grown cultivars using Nutrient Film Technology NFT and microstorage roots were evaluated TU-82-155 an early maturing 90 DAP with orange flesh and tinge red skin and PI318846-3 a late maturing 135 DAP with white flesh and off-yellow skin were compared for differential genes expression during storage root development at 14 21 28 35 and 45 DAP Total RNA was isolated from

Lacustrine turbidites as a tool for quantitative earthquake reconstruction: New evidence for a variable rupture mode in south central Chile

NASA Astrophysics Data System (ADS)

Moernaut, Jasper; Daele, Maarten Van; Heirman, Katrien; Fontijn, Karen; Strasser, Michael; Pino, Mario; Urrutia, Roberto; De Batist, Marc

2014-03-01

Understanding the long-term earthquake recurrence pattern at subduction zones requires continuous paleoseismic records with excellent temporal and spatial resolution and stable threshold conditions. South central Chilean lakes are typically characterized by laminated sediments providing a quasi-annual resolution. Our sedimentary data show that lacustrine turbidite sequences accurately reflect the historical record of large interplate earthquakes (among others the 2010 and 1960 events). Furthermore, we found that a turbidite's spatial extent and thickness are a function of the local seismic intensity and can be used for reconstructing paleo-intensities. Consequently, our multilake turbidite record aids in pinpointing magnitudes, rupture locations, and extent of past subduction earthquakes in south central Chile. Comparison of the lacustrine turbidite records with historical reports, a paleotsunami/subsidence record, and a marine megaturbidite record demonstrates that the Valdivia Segment is characterized by a variable rupture mode over the last 900 years including (i) full ruptures (Mw ~9.5: 1960, 1575, 1319 ± 9, 1127 ± 44), (ii) ruptures covering half of the Valdivia Segment (Mw ~9: 1837), and (iii) partial ruptures of much smaller coseismic slip and extent (Mw ~7.5-8: 1737, 1466 ± 4). Also, distant or smaller local earthquakes can leave a specific sedimentary imprint which may resolve subtle differences in seismic intensity values. For instance, the 2010 event at the Maule Segment produced higher seismic intensities toward southeastern localities compared to previous megathrust ruptures of similar size and extent near Concepción.

Postharvest monitoring of organic potato (cv. Anuschka) during hot-air drying using visible-NIR hyperspectral imaging.

PubMed

Moscetti, Roberto; Sturm, Barbara; Crichton, Stuart Oj; Amjad, Waseem; Massantini, Riccardo

2018-05-01

The potential of hyperspectral imaging (500-1010 nm) was evaluated for monitoring of the quality of potato slices (var. Anuschka) of 5, 7 and 9 mm thickness subjected to air drying at 50 °C. The study investigated three different feature selection methods for the prediction of dry basis moisture content and colour of potato slices using partial least squares regression (PLS). The feature selection strategies tested include interval PLS regression (iPLS), and differences and ratios between raw reflectance values for each possible pair of wavelengths (R[λ 1 ]-R[λ 2 ] and R[λ 1 ]:R[λ 2 ], respectively). Moreover, the combination of spectral and spatial domains was tested. Excellent results were obtained using the iPLS algorithm. However, features from both datasets of raw reflectance differences and ratios represent suitable alternatives for development of low-complex prediction models. Finally, the dry basis moisture content was high accurately predicted by combining spectral data (i.e. R[511 nm]-R[994 nm]) and spatial domain (i.e. relative area shrinkage of slice). Modelling the data acquired during drying through hyperspectral imaging can provide useful information concerning the chemical and physicochemical changes of the product. With all this information, the proposed approach lays the foundations for a more efficient smart dryer that can be designed and its process optimized for drying of potato slices. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

Improving Photometry and Stellar Signal Preservation with Pixel-Level Systematic Error Correction

NASA Technical Reports Server (NTRS)

Kolodzijczak, Jeffrey J.; Smith, Jeffrey C.; Jenkins, Jon M.

2013-01-01

The Kepler Mission has demonstrated that excellent stellar photometric performance can be achieved using apertures constructed from optimally selected CCD pixels. The clever methods used to correct for systematic errors, while very successful, still have some limitations in their ability to extract long-term trends in stellar flux. They also leave poorly correlated bias sources, such as drifting moiré pattern, uncorrected. We will illustrate several approaches where applying systematic error correction algorithms to the pixel time series, rather than the co-added raw flux time series, provide significant advantages. Examples include, spatially localized determination of time varying moiré pattern biases, greater sensitivity to radiation-induced pixel sensitivity drops (SPSDs), improved precision of co-trending basis vectors (CBV), and a means of distinguishing the stellar variability from co-trending terms even when they are correlated. For the last item, the approach enables physical interpretation of appropriately scaled coefficients derived in the fit of pixel time series to the CBV as linear combinations of various spatial derivatives of the pixel response function (PRF). We demonstrate that the residuals of a fit of soderived pixel coefficients to various PRF-related components can be deterministically interpreted in terms of physically meaningful quantities, such as the component of the stellar flux time series which is correlated with the CBV, as well as, relative pixel gain, proper motion and parallax. The approach also enables us to parameterize and assess the limiting factors in the uncertainties in these quantities.

Organizing for Excellence.

ERIC Educational Resources Information Center

Duttweiler, Patricia Cloud

Factors that contribute to excellence in education, as well as those that have contributed to the failure of change efforts, are the subject of this document. It provides a summary of the literature on reform efforts; effective schools; new organizational perspectives derived from the business sector; organizational restructuring being tested in…

Fan Cart: The Next Generation

ERIC Educational Resources Information Center

Lamore, Brian

2016-01-01

For years the fan cart has provided physics students with an excellent resource for exploring fundamental mechanics concepts such as acceleration, Newton's laws, impulse, momentum, work-energy, and energy conversions. "The Physics Teacher" has even seen some excellent do-it-yourself (DIY) fan carts and activities. If you are interested…

National Study of Excellence and Innovation in Physical Therapist Education: Part 2-A Call to Reform.

PubMed

Jensen, Gail M; Hack, Laurita M; Nordstrom, Terrence; Gwyer, Janet; Mostrom, Elizabeth

2017-09-01

This perspective shares recommendations that draw from (1) the National Study of Excellence and Innovation in Physical Therapist Education research findings and a conceptual model of excellence in physical therapist education, (2) the Carnegie Foundation's Preparation for the Professions Program (PPP), and (3) research in the learning sciences. The 30 recommendations are linked to the dimensions described in the conceptual model for excellence in physical therapist education: Culture of Excellence, Praxis of Learning, and Organizational Structures and Resources. This perspective proposes a transformative call for reform framed across 3 core categories: (1) creating a culture of excellence, leadership, and partnership, (2) advancing the learning sciences and understanding and enacting the social contract, and (3) implementing organizational imperatives. Similar to the Carnegie studies, this perspective identifies action items (9) that should be initiated immediately in a strategic and systematic way by the major organizational stakeholders in physical therapist education. These recommendations and action items provide a transformative agenda for physical therapist education, and thus the profession, in meeting the changing needs of society through higher levels of excellence. © 2017 American Physical Therapy Association.

High-resolution fluence verification for treatment plan specific QA in ion beam radiotherapy

NASA Astrophysics Data System (ADS)

Martišíková, Mária; Brons, Stephan; Hesse, Bernd M.; Jäkel, Oliver

2013-03-01

Ion beam radiotherapy exploits the finite range of ion beams and the increased dose deposition of ions toward the end of their range in material. This results in high dose conformation to the target region, which can be further increased using scanning ion beams. The standard method for patient-plan verification in ion beam therapy is ionization chamber dosimetry. The spatial resolution of this method is given by the distance between the chambers (typically 1 cm). However, steep dose gradients created by scanning ion beams call for more information and improved spatial resolution. Here we propose a clinically applicable method, supplementary to standard patient-plan verification. It is based on ion fluence measurements in the entrance region with high spatial resolution in the plane perpendicular to the beam, separately for each energy slice. In this paper the usability of the RID256 L amorphous silicon flat-panel detector for the measurements proposed is demonstrated for carbon ion beams. The detector provides sufficient spatial resolution for this kind of measurement (pixel pitch 0.8 mm). The experiments were performed at the Heidelberg Ion-Beam Therapy Center in Germany. This facility is equipped with a synchrotron capable of accelerating ions from protons up to oxygen to energies between 48 and 430 MeV u-1. Beam application is based on beam scanning technology. The measured signal corresponding to single energy slices was translated to ion fluence on a pixel-by-pixel basis, using calibration, which is dependent on energy and ion type. To quantify the agreement of the fluence distributions measured with those planned, a gamma-index criterion was used. In the patient field investigated excellent agreement was found between the two distributions. At least 95% of the slices contained more than 96% of points agreeing with our criteria. Due to the high spatial resolution, this method is especially valuable for measurements of strongly inhomogeneous fluence distributions like those in intensity-modulated treatment plans or plans including dose painting. Since no water phantom is needed to perform measurements, the flat-panel detector investigated has high potential for use with gantries. Before the method can be used in the clinical routine, it has to be sufficiently tested for each detector-facility combination.

Modeling Spectral Turnovers in Interplanetary Shocks Observed by ULYSSES

NASA Astrophysics Data System (ADS)

Summerlin, E. J.; Baring, M. G.

2009-12-01

Interplanetary shocks in the heliosphere provide excellent test cases for the simulation and theory of particle acceleration at shocks thanks to the presence of in-situ measurements and a relatively well understood initial particle distribution. The Monte-Carlo test particle simulation employed in this work has been previously used to study injection and acceleration from thermal energies into the high energy power-law tail at co-rotating interaction regions (CIRs) in the heliosphere presuming a steady state planar shock (Summerlin & Baring, 2006, Baring and Summerlin, 2008). These simulated power-spectra compare favorably with in-situ measurements from the ULYSSES spacecraft below 60 keV. However, to effectively model the high energy exponential cutoff at energies above 60 keV observed in these distributions, simulations must apply spatial or temporal constraints to the acceleration process. This work studies the effects of a variety of temporal and spatial co! nstraints (including spatial constraints on the turbulent region around the shock as determined by magnetometer data, spatial constraints related to the scale size of the shock and constraints on the acceleration time based on the known limits for the shock's lifetime) on the high energy cut-off and compares simulated particle spectra to those observed by the ULYSSES HI-SCALE instrument in an effort to determine which constraint is creating the cut-off and using that constraining parameter to determine additional information about the shock that can not, normally, be determined by a single data point, such as the spatial extent of the shock or how long the shock has been propagating through the heliosphere before it encounters the spacecraft. Shocks observed by multiple spacecraft will be of particular interest as their parameters will be better constrained than shocks observed by only one spacecraft. To achieve these goals, the simulation will be modified to include the re! trodictive approach of Jones (1978) to accurately track time spent dow nstream while maintaining, to large degree, the large dynamic range and short run times that make this type of simulation so attractive. This work is inspired by examinations of acceleration cutoffs in SEP events performed by various authors (see Li et al., 2009, and references therein), and it is hoped that this work will pave the way for a multi-species analysis similar to theirs that should greatly enhance the information one can derive about shocks based on individual observations.

OT1_tvelusam_2: HIFI studies of the small-scale structures in the Galactic diffuse clouds with [CII] and [CI

NASA Astrophysics Data System (ADS)

Velusamy, T.

2010-07-01

The 1.9 THz [CII] observations provide a powerful probe of warm diffuse clouds, because they can observe them in emission and are useful as a tracer of their molecular H2 not directly traced by CO or other means. HIFI observations of [CII] provide a high resolution of 12 arcsec, better than that for single dish CO (> 30 arcsec) maps, and much better than HI (>30 arcsec). Thus with HIFI we have an opportunity probe the small scale structures in diffuse clouds in the inner Galaxy at distances > 3 kpc. To study the structure of diffuse ISM gas at small scales we propose HIFI maps of 1.9 THz (158 micron) [CII] line emission in a selection of 16 lines of sight (LOSs) towards the inner Galaxy, which are also being observed as part of the GOT C+ survey of [CII] in the Galactic plane. GOT C+ provides mainly single point spectra without any spatial data. Maps of [CII] will constrain better the cloud properties and models when combining [CII] and HI data. The proposed OTF X map will be along the longitude and latitude centered on 18 selected GOT C+ LOS over a length of 3 arcmin in each direction, which is adequate enough to provide sufficient spatial information on the small scale structures at larger distances (>3 kpc) and to characterize the CII filling factor in the larger beams of the ancillary (HI, CO, and CI data). The [CI] 609 & 370micron and the 12CO(7-6) (which lies within the CI band) are excellent diagnostics of the physical conditions of transition clouds and PDRs. We will use the ratio of the [CI] lines to constrain the kinetic temperature and volume density of the CII/CI/CO transition zones in molecular clouds using radiative transfer codes. We also propose OTF X maps in both the [CI] lines for all CII target LOSs. We anticipate fully resolved structural data in [CII] on at least 300 velocity resolved clouds along with their [CI] emissions. We request a total of 33.2 hrs of HIFI observing time.

Implementing Service Excellence in Higher Education

ERIC Educational Resources Information Center

Khan, Hina; Matlay, Harry

2009-01-01

Purpose: The purpose of this paper is to provide a critical analysis of the importance of service excellence in higher education. Design/methodology/approach: The research upon which this paper is based employed a phenomenological approach. This method was selected for its focus on respondent perceptions and experiences. Both structured and…

Physical Education for Health and Wellbeing: A Discourse Analysis of Scottish Physical Education Curricular Documentation

ERIC Educational Resources Information Center

McEvilly, Nollaig; Verheul, Martine; Atencio, Matthew; Jess, Mike

2014-01-01

This paper provides an analysis of the discourses associated with physical education in Scotland's "Curriculum for Excellence". We implement a poststructural perspective in order to identify the discourses that underpin the physical education sections of the "Curriculum for Excellence" "health and well-being"…

Experiences and Outcomes of Preschool Physical Education: An Analysis of Developmental Discourses in Scottish Curricular Documentation

ERIC Educational Resources Information Center

McEvilly, Nollaig

2014-01-01

This article provides an analysis of developmental discourses underpinning preschool physical education in Scotland's Curriculum for Excellence. Implementing a post-structural perspective, the article examines the preschool experiences and outcomes related to physical education as presented in the Curriculum for Excellence "health and…

WASP (Write a Scientific Paper) using Excel - 10: Contingency tables.

PubMed

Grech, Victor

2018-06-01

Contingency tables may be required to perform chi-test analyses. This provides pointers as to how to do this in Microsoft Excel and explains how to set up methods to calculate confidence intervals for proportions, including proportions with zero numerators. Copyright © 2018 Elsevier B.V. All rights reserved.

Seizing Opportunity at the Top: Reaching Every Student with Excellent Teachers--Policymakers' Checklist

ERIC Educational Resources Information Center

Public Impact, 2012

2012-01-01

Research continues to confirm that without "excellent" teachers consistently, most students who start behind stay behind, and too few middling and advanced students leap ahead. Even solid teachers who achieve one year of learning progress leave achievement gaps intact. Schools that "consistently" provide all students with…

The 2013 Aspen Prize for Community College Excellence

ERIC Educational Resources Information Center

Perlstein, Linda

2013-01-01

For millions of Americans, community colleges provide an essential pathway to well-paying jobs and continuing higher education. The Aspen Prize for Community College Excellence honors those institutions that strive for and achieve exceptional levels of success for all students, while they are in college and after they graduate. Community colleges…

Why Excel?

ERIC Educational Resources Information Center

Barreto, Humberto

2015-01-01

This article is not the usual Excel pedagogy fare in that it does not provide an application or example taught via a spreadsheet. Instead, it briefly reviews the history of spreadsheets in the economics classroom and explores the current environment, with an emphasis on modern learning theory. The conclusion is not surprising: spreadsheets improve…

Chemistry. Focus on Excellence, Volume 3, Number 2.

ERIC Educational Resources Information Center

Penick, John E., Ed.; Krajcik, Joseph, Ed.

Eight examples of innovative and outstanding chemistry programs are described. These programs were selected using state criteria and at least four independent reviewers. While Project Synthesis offered a desired state, these examples of excellence provided views of what is already a reality. Included are the goals of an exemplary science program…

Breaking Boundaries and Sparking Enthusiasm with TSA

ERIC Educational Resources Information Center

Hess, Timothy R.

2010-01-01

The Technology Student Association (TSA) provides opportunities for all students who excel in technology education classes. It is really an excellent way to enrich one's classroom--utilizing the resources of an organization that promotes the importance of technological literacy. In this article, the author presents the benefits for initiating a…

Homework Variety: A Way To Educational Excellence.

ERIC Educational Resources Information Center

Foyle, Harvey C.

Variety in homework is one way to achieve educational excellence in social studies. The twin social studies goals of teaching basic knowledge and teaching reasoning/critical thinking skills are accomplished by providing variety. In accordance with Lee and Pratt's homework taxonomy, homework can be placed under one of the following: preparation,…

Missing Aircraft Crash Sites and Spatial Relationships to the Last Radar Fix.

PubMed

Koester, Robert J; Greatbatch, Ian

2016-02-01

Few studies have examined the spatial characteristics of missing aircraft in actual distress. No previous studies have looked at the distance from the last radar plot to the crash site. The purpose of this study was to characterize this distance and then identify environmental and flight characteristics that might be used to predict the spatial relationship and, therefore, aid search and rescue planners. Detailed records were obtained from the U.S. Air Force Rescue Coordination Center for missing aircraft in distress from 2002 to 2008. The data was combined with information from the National Transportation Safety Board (NTSB) Accident Database. The spatial relationship between the last radar plot and crash site was then determined using GIS analysis. A total of 260 missing aircraft incidents involving 509 people were examined, of which 216 (83%) contained radar information. Among the missing aircraft the mortality rate was 89%; most occurred in mountainous terrain (57%); Part 91 flight accounted for 95% of the incidents; and 50% of the aircraft were found within 0.8 nmi from the last radar plot. Flight characteristics, descent rate, icing conditions, and instrument flight rule vs. visual flight rule flight could be used to predict spatial characteristics. In most circumstances, the last radar position is an excellent predictor of the crash site. However, 5% of aircraft are found further than 45.4 nmi. The flight and environmental conditions were identified and placed into an algorithm to aid search planners in determining how factors should be prioritized.

Spatial and temporal air quality pattern recognition using environmetric techniques: a case study in Malaysia.

PubMed

Syed Abdul Mutalib, Sharifah Norsukhairin; Juahir, Hafizan; Azid, Azman; Mohd Sharif, Sharifah; Latif, Mohd Talib; Aris, Ahmad Zaharin; Zain, Sharifuddin M; Dominick, Doreena

2013-09-01

The objective of this study is to identify spatial and temporal patterns in the air quality at three selected Malaysian air monitoring stations based on an eleven-year database (January 2000-December 2010). Four statistical methods, Discriminant Analysis (DA), Hierarchical Agglomerative Cluster Analysis (HACA), Principal Component Analysis (PCA) and Artificial Neural Networks (ANNs), were selected to analyze the datasets of five air quality parameters, namely: SO2, NO2, O3, CO and particulate matter with a diameter size of below 10 μm (PM10). The three selected air monitoring stations share the characteristic of being located in highly urbanized areas and are surrounded by a number of industries. The DA results show that spatial characterizations allow successful discrimination between the three stations, while HACA shows the temporal pattern from the monthly and yearly factor analysis which correlates with severe haze episodes that have happened in this country at certain periods of time. The PCA results show that the major source of air pollution is mostly due to the combustion of fossil fuel in motor vehicles and industrial activities. The spatial pattern recognition (S-ANN) results show a better prediction performance in discriminating between the regions, with an excellent percentage of correct classification compared to DA. This study presents the necessity and usefulness of environmetric techniques for the interpretation of large datasets aiming to obtain better information about air quality patterns based on spatial and temporal characterizations at the selected air monitoring stations.

Integrating landscape analysis and planning: a multi-scale approach for oriented management of tourist recreation.

PubMed

de Aranzabal, Itziar; Schmitz, María F; Pineda, Francisco D

2009-11-01

Tourism and landscape are interdependent concepts. Nature- and culture-based tourism are now quite well developed activities and can constitute an excellent way of exploiting the natural resources of certain areas, and should therefore be considered as key objectives in landscape planning and management in a growing number of countries. All of this calls for careful evaluation of the effects of tourism on the territory. This article focuses on an integrated spatial method for landscape analysis aimed at quantifying the relationship between preferences of visitors and landscape features. The spatial expression of the model relating types of leisure and recreational preferences to the potential capacity of the landscape to meet them involves a set of maps showing degrees of potential visitor satisfaction. The method constitutes a useful tool for the design of tourism planning and management strategies, with landscape conservation as a reference.

Characterization of LANDSAT-4 TM and MSS Image Quality for Interpretation of Agricultural and Forest Resources

NASA Technical Reports Server (NTRS)

Degloria, S. D.; Colwell, R. N.

1984-01-01

Systematic analysis of both image and numeric data shows that the overall spectral, spatial, and radiometric quality of the TM data are excellent. Spectral variations in fallow fields are due to the vaiability in soil moisture and surface roughness resulting from the various stages of field preparation for small grains production. Spectrally, the addition of the first TM short wave infrared band (Band 5) significantly enhanced ability to discriminate different crop types. Bands 1, 5, and 6 contain saturated pixels due to high albedo effects, low moisture conditions, and high radiant temperatures of granite and dry, bare soil on south facing slopes, respectively. Spatially, the two fold decrease in interpixel distance and four fold decrease in area per pixel between the TM and MSS allow for improved discrimination of small fields, boundary conditions, road and stream networks in rough terrain, and small forest clearings resulting from various forest management practices.

Raman Imaging in Cell Membranes, Lipid-Rich Organelles, and Lipid Bilayers.

PubMed

Syed, Aleem; Smith, Emily A

2017-06-12

Raman-based optical imaging is a promising analytical tool for noninvasive, label-free chemical imaging of lipid bilayers and cellular membranes. Imaging using spontaneous Raman scattering suffers from a low intensity that hinders its use in some cellular applications. However, developments in coherent Raman imaging, surface-enhanced Raman imaging, and tip-enhanced Raman imaging have enabled video-rate imaging, excellent detection limits, and nanometer spatial resolution, respectively. After a brief introduction to these commonly used Raman imaging techniques for cell membrane studies, this review discusses selected applications of these modalities for chemical imaging of membrane proteins and lipids. Finally, recent developments in chemical tags for Raman imaging and their applications in the analysis of selected cell membrane components are summarized. Ongoing developments toward improving the temporal and spatial resolution of Raman imaging and small-molecule tags with strong Raman scattering cross sections continue to expand the utility of Raman imaging for diverse cell membrane studies.

Plant-Pathogen Effectors: Cellular Probes Interfering with Plant Defenses in Spatial and Temporal Manners

PubMed Central

Toruño, Tania Y.; Stergiopoulos, Ioannis; Coaker, Gitta

2017-01-01

Plants possess large arsenals of immune receptors capable of recognizing all pathogen classes. To cause disease, pathogenic organisms must be able to overcome physical barriers, suppress or evade immune perception, and derive nutrients from host tissues. Consequently, to facilitate some of these processes, pathogens secrete effector proteins that promote colonization. This review covers recent advances in the field of effector biology, focusing on conserved cellular processes targeted by effectors from diverse pathogens. The ability of effectors to facilitate pathogen entry into the host interior, suppress plant immune perception, and alter host physiology for pathogen benefit is discussed. Pathogens also deploy effectors in a spatial and temporal manner, depending on infection stage. Recent advances have also enhanced our understanding of effectors acting in specific plant organs and tissues. Effectors are excellent cellular probes that facilitate insight into biological processes as well as key points of vulnerability in plant immune signaling networks. PMID:27359369

Entanglement hamiltonian and entanglement contour in inhomogeneous 1D critical systems

NASA Astrophysics Data System (ADS)

Tonni, Erik; Rodríguez-Laguna, Javier; Sierra, Germán

2018-04-01

Inhomogeneous quantum critical systems in one spatial dimension have been studied by using conformal field theory in static curved backgrounds. Two interesting examples are the free fermion gas in the harmonic trap and the inhomogeneous XX spin chain called rainbow chain. For conformal field theories defined on static curved spacetimes characterised by a metric which is Weyl equivalent to the flat metric, with the Weyl factor depending only on the spatial coordinate, we study the entanglement hamiltonian and the entanglement spectrum of an interval adjacent to the boundary of a segment where the same boundary condition is imposed at the endpoints. A contour function for the entanglement entropies corresponding to this configuration is also considered, being closely related to the entanglement hamiltonian. The analytic expressions obtained by considering the curved spacetime which characterises the rainbow model have been checked against numerical data for the rainbow chain, finding an excellent agreement.

Diverse Region-Based CNN for Hyperspectral Image Classification.

PubMed

Zhang, Mengmeng; Li, Wei; Du, Qian

2018-06-01

Convolutional neural network (CNN) is of great interest in machine learning and has demonstrated excellent performance in hyperspectral image classification. In this paper, we propose a classification framework, called diverse region-based CNN, which can encode semantic context-aware representation to obtain promising features. With merging a diverse set of discriminative appearance factors, the resulting CNN-based representation exhibits spatial-spectral context sensitivity that is essential for accurate pixel classification. The proposed method exploiting diverse region-based inputs to learn contextual interactional features is expected to have more discriminative power. The joint representation containing rich spectral and spatial information is then fed to a fully connected network and the label of each pixel vector is predicted by a softmax layer. Experimental results with widely used hyperspectral image data sets demonstrate that the proposed method can surpass any other conventional deep learning-based classifiers and other state-of-the-art classifiers.

Novel Handheld Magnetometer Probe Based on Magnetic Tunnelling Junction Sensors for Intraoperative Sentinel Lymph Node Identification

PubMed Central

Cousins, A.; Balalis, G. L.; Thompson, S. K.; Forero Morales, D.; Mohtar, A.; Wedding, A. B.; Thierry, B.

2015-01-01

Using magnetic tunnelling junction sensors, a novel magnetometer probe for the identification of the sentinel lymph node using magnetic tracers was developed. Probe performance was characterised in vitro and validated in a preclinical swine model. Compared to conventional gamma probes, the magnetometer probe showed excellent spatial resolution of 4.0 mm, and the potential to detect as few as 5 μg of magnetic tracer. Due to the high sensitivity of the magnetometer, all first-tier nodes were identified in the preclinical experiments, and there were no instances of false positive or false negative detection. Furthermore, these preliminary data encourage the application of the magnetometer probe for use in more complex lymphatic environments, such as in gastrointestinal cancers, where the sentinel node is often in close proximity to other non-sentinel nodes, and high spatial resolution detection is required. PMID:26038833

Chandra/ACIS Observations of the 30 Doradus Star-Forming Complex

NASA Astrophysics Data System (ADS)

Townsley, Leisa; Broos, Patrick; Feigelson, Eric; Burrows, David; Chu, You-Hua; Garmire, Gordon; Griffiths, Richard; Maeda, Yoshitomo; Pavlov, George; Tsuboi, Yohko

2002-04-01

30 Doradus is the archetype giant extragalactic H II region, a massive star-forming complex in the Large Magellanic Cloud. We examine high-spatial-resolution X-ray images and spectra of the essential parts of 30 Doradus, obtained with the Advanced CCD Imaging Spectrometer (ACIS) aboard the Chandra X-ray Observatory. The central cluster of young high-mass stars, R136, is resolved at the arcsecond level, allowing spectral analysis of bright constituents; other OB/Wolf-Rayet binaries and multiple systems (e.g. R139, R140) are also detected. Spatially-resolved spectra are presented for N157B, the composite SNR containing a 16-msec pulsar. The spectrally soft superbubble structures seen by ROSAT are dramatically imaged by Chandra; we explore the spectral differences they exhibit. Taken together, the components of 30 Doradus give us an excellent microscopic view of high-energy phenomena seen on larger scales in more distant galaxies as starbursts and galactic winds.

Underwater wireless optical MIMO system with spatial modulation and adaptive power allocation

NASA Astrophysics Data System (ADS)

Huang, Aiping; Tao, Linwei; Niu, Yilong

2018-04-01

In this paper, we investigate the performance of underwater wireless optical multiple-input multiple-output communication system combining spatial modulation (SM-UOMIMO) with flag dual amplitude pulse position modulation (FDAPPM). Channel impulse response for coastal and harbor ocean water links are obtained by Monte Carlo (MC) simulation. Moreover, we obtain the closed-form and upper bound average bit error rate (BER) expressions for receiver diversity including optical combining, equal gain combining and selected combining. And a novel adaptive power allocation algorithm (PAA) is proposed to minimize the average BER of SM-UOMIMO system. Our numeric results indicate an excellent match between the analytical results and numerical simulations, which confirms the accuracy of our derived expressions. Furthermore, the results show that adaptive PAA outperforms conventional fixed factor PAA and equal PAA obviously. Multiple-input single-output system with adaptive PAA obtains even better BER performance than MIMO one, at the same time reducing receiver complexity effectively.

Enhanced dual-frequency pattern scheme based on spatial-temporal fringes method

NASA Astrophysics Data System (ADS)

Wang, Minmin; Zhou, Canlin; Si, Shuchun; Lei, Zhenkun; Li, Xiaolei; Li, Hui; Li, YanJie

2018-07-01

One of the major challenges of employing a dual-frequency phase-shifting algorithm for phase retrieval is its sensitivity to noise. Yun et al proposed a dual-frequency method based on the Fourier transform profilometry, yet the low-frequency lobes are close to each other for accurate band-pass filtering. In the light of this problem, a novel dual-frequency pattern based on the spatial-temporal fringes (STF) method is developed in this paper. Three fringe patterns with two different frequencies are required. The low-frequency phase is obtained from two low-frequency fringe patterns by the STF method, so the signal lobes can be extracted accurately as they are far away from each other. The high-frequency phase is retrieved from another fringe pattern without the impact of the DC component. Simulations and experiments are conducted to demonstrate the excellent precision of the proposed method.

Fibre-coupled red diode-pumped Alexandrite TEM00 laser with single and double-pass end-pumping

NASA Astrophysics Data System (ADS)

Arbabzadah, E. A.; Damzen, M. J.

2016-06-01

We report the investigation of an Alexandrite laser end-pumped by a fibre-coupled red diode laser module. Power, efficiency, spatial, spectral, and wavelength tuning performance are studied as a function of pump and laser cavity parameters. It is the first demonstration, to our knowledge, of greater than 1 W power and also highest laser slope efficiency (44.2%) in a diode-pumped Alexandrite laser with diffraction-limited TEM00 mode operation. Spatial quality was excellent with beam propagation parameter M 2 ~ 1.05. Wavelength tuning from 737-796 nm was demonstrated using an intracavity birefringent tuning filter. Using a novel double pass end-pumping scheme to get efficient absorption of both polarisation states of the scrambled fibre-delivered diode pump, a total output coupled power of 1.66 W is produced in TEM00 mode with 40% slope efficiency.

Magnetohydrodynamic modelling of exploding foil initiators

NASA Astrophysics Data System (ADS)

Neal, William

2015-06-01

Magnetohydrodynamic (MHD) codes are currently being developed, and used, to predict the behaviour of electrically-driven flyer-plates. These codes are of particular interest to the design of exploding foil initiator (EFI) detonators but there is a distinct lack of comparison with high-fidelity experimental data. This study aims to compare a MHD code with a collection of temporally and spatially resolved diagnostics including PDV, dual-axis imaging and streak imaging. The results show the code's excellent representation of the flyer-plate launch and highlight features within the experiment that the model fails to capture.

Coherence measurement with digital micromirror device.

PubMed

Partanen, Henri; Turunen, Jari; Tervo, Jani

2014-02-15

We measure the complex-valued spatial coherence function of a multimode broad-area laser diode using Young's classical double slit experiment realized with a digital micromirror device. We use this data to construct the coherent modes of the beam and to simulate its propagation before and after the measurement plane. When comparing the results to directly measured intensity profiles, we find excellent correspondence to the extent that even small details of the beam can be predicted. We also consider the number of measurement points required to model the beam with sufficient accuracy.

All Carbon-Based Photodetectors: An eminent integration of graphite quantum dots and two dimensional graphene

PubMed Central

Cheng, Shih-Hao; Weng, Tong-Min; Lu, Meng-Lin; Tan, Wei-Chun; Chen, Ju-Ying; Chen, Yang-Fang

2013-01-01

Photodetectors with ultrahigh sensitivity based on the composite made with all carbon-based materials consisting of graphite quantum dots (QDs), and two dimensional graphene crystal have been demonstrated. Under light illumination, remarkably, a photocurrent responsivity up to 4 × 107 AW−1 can be obtained. The underlying mechanism is attributed to the spatial separation of photogenerated electrons and holes due to the charge transfer caused by the appropriate band alignment across the interface between graphite QDs and graphene. Besides, the large absorptivity of graphite QDs and the excellent conductivity of the graphene sheet also play significant roles. Our result therefore demonstrates an outstanding illustration for the integration of the distinct properties of nanostructured carbon materials with different dimensionalities to achieve highly efficient devices. Together with the associated mechanism, it paves a valuable step for the further development of all carbon-based, cheap, and non-toxic optoelectronics devices with excellent performance. PMID:24045846

Runge-Kutta Methods for Linear Ordinary Differential Equations

NASA Technical Reports Server (NTRS)

Zingg, David W.; Chisholm, Todd T.

1997-01-01

Three new Runge-Kutta methods are presented for numerical integration of systems of linear inhomogeneous ordinary differential equations (ODES) with constant coefficients. Such ODEs arise in the numerical solution of the partial differential equations governing linear wave phenomena. The restriction to linear ODEs with constant coefficients reduces the number of conditions which the coefficients of the Runge-Kutta method must satisfy. This freedom is used to develop methods which are more efficient than conventional Runge-Kutta methods. A fourth-order method is presented which uses only two memory locations per dependent variable, while the classical fourth-order Runge-Kutta method uses three. This method is an excellent choice for simulations of linear wave phenomena if memory is a primary concern. In addition, fifth- and sixth-order methods are presented which require five and six stages, respectively, one fewer than their conventional counterparts, and are therefore more efficient. These methods are an excellent option for use with high-order spatial discretizations.

Distribution of oxygen-18 and deuteriun in river waters across the United States

USGS Publications Warehouse

Kendall, Carol; Coplen, Tyler B.

2001-01-01

Reconstruction of continental palaeoclimate and palaeohydrology is currently hampered by limited information about isotopic patterns in the modern hydrologic cycle. To remedy this situation and to provide baseline data for other isotope hydrology studies, more than 4800, depth- and width-integrated, stream samples from 391 selected sites within the USGS National Stream Quality Accounting Network (NASQAN) and Hydrologic Benchmark Network (HBN) were analysed for δ18O and δ2H (http://water.usgs.gov/pubs/ofr/ofr00-160/pdf/ofr00-160.pdf). Each site was sampled bimonthly or quarterly for 2·5 to 3 years between 1984 and 1987. The ability of this dataset to serve as a proxy for the isotopic composition of modern precipitation in the USA is supported by the excellent agreement between the river dataset and the isotopic compositions of adjacent precipitation monitoring sites, the strong spatial coherence of the distributions of δ18O and δ2H, the good correlations of the isotopic compositions with climatic parameters, and the good agreement between the ‘national’ meteoric water line (MWL) generated from unweighted analyses of samples from the 48 contiguous states of δ2H=8·11δ18O+8·99 (r2=0·98) and the unweighted global MWL of sites from the Global Network for Isotopes in Precipitation (GNIP) of the International Atomic Energy Agency and the World Meteorological Organization (WMO) of δ2H=8·17δ18O+10·35. The national MWL is composed of water samples that arise in diverse local conditions where the local meteoric water lines (LMWLs) usually have much lower slopes. Adjacent sites often have similar LMWLs, allowing the datasets to be combined into regional MWLs. The slopes of regional MWLs probably reflect the humidity of the local air mass, which imparts a distinctive evaporative isotopic signature to rainfall and hence to stream samples. Deuterium excess values range from 6 to 15‰ in the eastern half of the USA, along the northwest coast and on the Colorado Plateau. In the rest of the USA, these values range from −2 to 6‰, with strong spatial correlations with regional aridity. The river samples have successfully integrated the spatial variability in the meteorological cycle and provide the best available dataset on the spatial distributions of δ18O and δ2H values of meteoric waters in the USA.

The nature of excellent clinicians at an academic health science center: a qualitative study.

PubMed

Mahant, Sanjay; Jovcevska, Vesna; Wadhwa, Anupma

2012-12-01

To understand the nature of excellent clinicians at an academic health science center by exploring how and why excellent clinicians achieve high performance. From 2008 to 2010, the authors conducted a qualitative study using a grounded theory approach. Members of the Clinical Advisory Committee in the Department of Pediatrics at the University of Toronto nominated peers whom they saw as excellent clinicians. The authors then conducted in-depth interviews with the most frequently nominated clinicians. They audio-recorded and transcribed the interviews and coded the transcripts to identify emergent themes. From interviews with 13 peer-nominated, excellent clinicians, a model emerged. Dominant themes fell into three categories: (1) core philosophy, (2) deliberate activities, and (3) everyday practice. Excellent clinicians are driven by a core philosophy defined by high intrinsic motivation and passion for patient care and humility. They refine their clinical skills through two deliberate activities-reflective clinical practice and scholarship. Their high performance in everyday practice is characterized by clinical skills and cognitive ability, people skills, engagement, and adaptability. A rich theory emerged explaining how excellent clinicians, driven by a core philosophy and engaged in deliberate activities, achieve high performance in everyday practice. This theory of the nature of excellent clinicians provides a holistic perspective of individual performance, informs medical education, supports faculty career development, and promotes clinical excellence in the culture of academic medicine.

Use of a spread sheet to calculate the current-density distribution produced in human and rat models by low-frequency electric fields.

PubMed

Hart, F X

1990-01-01

The current-density distribution produced inside irregularly shaped, homogeneous human and rat models by low-frequency electric fields is obtained by a two-stage finite-difference procedure. In the first stage the model is assumed to be equipotential. Laplace's equation is solved by iteration in the external region to obtain the capacitive-current densities at the model's surface elements. These values then provide the boundary conditions for the second-stage relaxation solution, which yields the internal current-density distribution. Calculations were performed with the Excel spread-sheet program on a Macintosh-II microcomputer. A spread sheet is a two-dimensional array of cells. Each cell of the sheet can represent a square element of space. Equations relating the values of the cells can represent the relationships between the potentials in the corresponding spatial elements. Extension to three dimensions is readily made. Good agreement was obtained with current densities measured on human models with both, one, or no legs grounded and on rat models in four different grounding configurations. The results also compared well with predictions of more sophisticated numerical analyses. Spread sheets can provide an inexpensive and relatively simple means to perform good, approximate dosimetric calculations on irregularly shaped objects.

Layout and results from the initial operation of the high-resolution x-ray imaging crystal spectrometer on the Large Helical Device.

PubMed

Pablant, N A; Bitter, M; Delgado-Aparicio, L; Goto, M; Hill, K W; Lazerson, S; Morita, S; Roquemore, A L; Gates, D; Monticello, D; Nielson, H; Reiman, A; Reinke, M; Rice, J E; Yamada, H

2012-08-01

First results of ion and electron temperature profile measurements from the x-ray imaging crystal spectrometer (XICS) diagnostic on the Large Helical Device (LHD) are presented. This diagnostic system has been operational since the beginning of the 2011 LHD experimental campaign and is the first application of the XICS diagnostic technique to helical plasma geometry. The XICS diagnostic provides measurements of ion and electron temperature profiles in LHD with a spatial resolution of 2 cm and a maximum time resolution of 5 ms (typically 20 ms). Ion temperature profiles from the XICS diagnostic are possible under conditions where charge exchange recombination spectroscopy (CXRS) is not possible (high density) or is perturbative to the plasma (low density or radio frequency heated plasmas). Measurements are made by using a spherically bent crystal to provide a spectrally resolved 1D image of the plasma from line integrated emission of helium-like Ar(16 +). The final hardware design and configuration are detailed along with the calibration procedures. Line-integrated ion and electron temperature measurements are presented, and the measurement accuracy is discussed. Finally central temperature measurements from the XICS system are compared to measurements from the Thomson scattering and CXRS systems, showing excellent agreement.

Intermittent fluctuations in the Alcator C-Mod scrape-off layer for ohmic and high confinement mode plasmas

NASA Astrophysics Data System (ADS)

Garcia, O. E.; Kube, R.; Theodorsen, A.; LaBombard, B.; Terry, J. L.

2018-05-01

Plasma fluctuations in the scrape-off layer of the Alcator C-Mod tokamak in ohmic and high confinement modes have been analyzed using gas puff imaging data. In all cases investigated, the time series of emission from a single spatially resolved view into the gas puff are dominated by large-amplitude bursts, attributed to blob-like filament structures moving radially outwards and poloidally. There is a remarkable similarity of the fluctuation statistics in ohmic plasmas and in edge localized mode-free and enhanced D-alpha high confinement mode plasmas. Conditionally averaged waveforms have a two-sided exponential shape with comparable temporal scales and asymmetry, while the burst amplitudes and the waiting times between them are exponentially distributed. The probability density functions and the frequency power spectral densities are similar for all these confinement modes. These results provide strong evidence in support of a stochastic model describing the plasma fluctuations in the scrape-off layer as a super-position of uncorrelated exponential pulses. Predictions of this model are in excellent agreement with experimental measurements in both ohmic and high confinement mode plasmas. The stochastic model thus provides a valuable tool for predicting fluctuation-induced plasma-wall interactions in magnetically confined fusion plasmas.

To be seen or to hide: visual characteristics of body patterns for camouflage and communication in the Australian giant cuttlefish Sepia apama.

PubMed

Zylinski, S; How, M J; Osorio, D; Hanlon, R T; Marshall, N J

2011-05-01

It might seem obvious that a camouflaged animal must generally match its background whereas to be conspicuous an organism must differ from the background. However, the image parameters (or statistics) that evaluate the conspicuousness of patterns and textures are seldom well defined, and animal coloration patterns are rarely compared quantitatively with their respective backgrounds. Here we examine this issue in the Australian giant cuttlefish Sepia apama. We confine our analysis to the best-known and simplest image statistic, the correlation in intensity between neighboring pixels. Sepia apama can rapidly change their body patterns from assumed conspicuous signaling to assumed camouflage, thus providing an excellent and unique opportunity to investigate how such patterns differ in a single visual habitat. We describe the intensity variance and spatial frequency power spectra of these differing body patterns and compare these patterns with the backgrounds against which they are viewed. The measured image statistics of camouflaged animals closely resemble their backgrounds, while signaling animals differ significantly from their backgrounds. Our findings may provide the basis for a set of general rules for crypsis and signals. Furthermore, our methods may be widely applicable to the quantitative study of animal coloration.

Genome-Scale Transcriptomic Insights into Early-Stage Fruit Development in Woodland Strawberry Fragaria vesca[C][W

PubMed Central

Kang, Chunying; Darwish, Omar; Geretz, Aviva; Shahan, Rachel; Alkharouf, Nadim; Liu, Zhongchi

2013-01-01

Fragaria vesca, a diploid woodland strawberry with a small and sequenced genome, is an excellent model for studying fruit development. The strawberry fruit is unique in that the edible flesh is actually enlarged receptacle tissue. The true fruit are the numerous dry achenes dotting the receptacle’s surface. Auxin produced from the achene is essential for the receptacle fruit set, a paradigm for studying crosstalk between hormone signaling and development. To investigate the molecular mechanism underlying strawberry fruit set, next-generation sequencing was employed to profile early-stage fruit development with five fruit tissue types and five developmental stages from floral anthesis to enlarged fruits. This two-dimensional data set provides a systems-level view of molecular events with precise spatial and temporal resolution. The data suggest that the endosperm and seed coat may play a more prominent role than the embryo in auxin and gibberellin biosynthesis for fruit set. A model is proposed to illustrate how hormonal signals produced in the endosperm and seed coat coordinate seed, ovary wall, and receptacle fruit development. The comprehensive fruit transcriptome data set provides a wealth of genomic resources for the strawberry and Rosaceae communities as well as unprecedented molecular insight into fruit set and early stage fruit development. PMID:23898027

Analytical and experimental studies of an optimum multisegment phased liner noise suppression concept

NASA Technical Reports Server (NTRS)

Sawdy, D. T.; Beckemeyer, R. J.; Patterson, J. D.

1976-01-01

Results are presented from detailed analytical studies made to define methods for obtaining improved multisegment lining performance by taking advantage of relative placement of each lining segment. Properly phased liner segments reflect and spatially redistribute the incident acoustic energy and thus provide additional attenuation. A mathematical model was developed for rectangular ducts with uniform mean flow. Segmented acoustic fields were represented by duct eigenfunction expansions, and mode-matching was used to ensure continuity of the total field. Parametric studies were performed to identify attenuation mechanisms and define preliminary liner configurations. An optimization procedure was used to determine optimum liner impedance values for a given total lining length, Mach number, and incident modal distribution. Optimal segmented liners are presented and it is shown that, provided the sound source is well-defined and flow environment is known, conventional infinite duct optimum attenuation rates can be improved. To confirm these results, an experimental program was conducted in a laboratory test facility. The measured data are presented in the form of analytical-experimental correlations. Excellent agreement between theory and experiment verifies and substantiates the analytical prediction techniques. The results indicate that phased liners may be of immediate benefit in the development of improved aircraft exhaust duct noise suppressors.

MRI-guided therapeutic ultrasound: Temperature feedback control for extracorporeal and endoluminal applicators

NASA Astrophysics Data System (ADS)

Salomir, Rares

2005-09-01

Therapeutic ultrasound is a mini-invasive and promising tool for in situ ablation of non-resectable tumors in uterus, breast, esophagus, kidney, liver, etc. Extracorporeal, endoluminal, and interstitial applicators have been successfully tested to date. Magnetic resonance imaging (MRI) is the only available technique providing non-invasive temperature mapping, together with excellent contrast of soft tissue. Coupling of these two technologies offers the advantage of both: (1) on line spatial guidance to the target region, and (2) thermal dose control during the treatment. This talk will provide an overview of the author's experience with automatic, active feedback control of the temperature evolution in tissues, which has been demonstrated with MRI compatible extracorporeal transducers (focused beam) or endoluminal applicators (plane waves). The feedback loop is based on fast switching capabilities of the driving electronics and real time data transfer out of the MR scanner. Precision of temperature control was typically better than 1°C. This approach is expected to improve the efficacy of the treatment (complete tumor ablation) and the thermal security of the critical regions crossed by the acoustic beam. It also permits one to reach an under-lethal heating regime for local drug delivery using thermosensitive liposomes or gene expression control based on hsp promoters.

Spectroscopic imaging of limiter heat and particle fluxes and the resulting impurity sources during Wendelstein 7-X startup plasmas.

PubMed

Stephey, L; Wurden, G A; Schmitz, O; Frerichs, H; Effenberg, F; Biedermann, C; Harris, J; König, R; Kornejew, P; Krychowiak, M; Unterberg, E A

2016-11-01

A combined IR and visible camera system [G. A. Wurden et al., "A high resolution IR/visible imaging system for the W7-X limiter," Rev. Sci. Instrum. (these proceedings)] and a filterscope system [R. J. Colchin et al., Rev. Sci. Instrum. 74, 2068 (2003)] were implemented together to obtain spectroscopic data of limiter and first wall recycling and impurity sources during Wendelstein 7-X startup plasmas. Both systems together provided excellent temporal and spatial spectroscopic resolution of limiter 3. Narrowband interference filters in front of the camera yielded C-III and H α photon flux, and the filterscope system provided H α , H β , He-I, He-II, C-II, and visible bremsstrahlung data. The filterscopes made additional measurements of several points on the W7-X vacuum vessel to yield wall recycling fluxes. The resulting photon flux from both the visible camera and filterscopes can then be compared to an EMC3-EIRENE synthetic diagnostic [H. Frerichs et al., "Synthetic plasma edge diagnostics for EMC3-EIRENE, highlighted for Wendelstein 7-X," Rev. Sci. Instrum. (these proceedings)] to infer both a limiter particle flux and wall particle flux, both of which will ultimately be used to infer the complete particle balance and particle confinement time τ P .

A Novel Optical Model for Remote Sensing of Near-Surface Soil Moisture

NASA Astrophysics Data System (ADS)

Babaeian, E.; Sadeghi, M.; Jones, S. B.; Tuller, M.

2016-12-01

Common triangle and trapezoid methods that are based on both optical and thermal remote sensing (RS) information have been widely applied in the past to estimate near-surface soil moisture from the soil temperature - vegetation index space (e.g., LST-NDVI). For most cases, this approach assumes a linear relationship between soil moisture and temperature. Though this linearity assumption yields reasonable moisture estimates, it is not always justified as evidenced by laboratory and field measurements. Furthermore, this approach requires optical as well as thermal RS data for definition of the land surface temperature (LST) - vegetation index space, therefore, it is not applicable to satellites that do not provide thermal output such as the ESA Sentinel-2. To overcome these limitations, we propose a novel trapezoid model that only relies on optical NIR and SWIR data. The new model was validated using Sentinel-2 and Landsat-8 data for the semiarid Walnut Gulch (AZ) and sub humid Little Washita (OK) watersheds that vastly differ in land use and surface cover and provide excellent ground-truth moisture information from extensive sensor networks. Preliminary results for 2015-2016 indicate significant potential of the new model with a RMSE smaller than 4% volumetric near-surface moisture content and also confirm the enhanced utility of the high spatially and temporally resolved Sentinel-2 data.

Spaceborne imaging spectrometer for environmental assessment of the coastal ocean

NASA Astrophysics Data System (ADS)

Davis, Curtiss O.

1996-10-01

With half of the world's population living within 50 km of the coastal ocean the coast and adjacent land areas are heavily used for recreation, and for frequently conflicting uses, such as, fisheries, oil and gas production, disposal of wastes, transportation and naval operations. Coastal ecosystems are sensitive, highly productive systems which are being heavily impacted by human activities, but which are not adequately sampled by any present or planned spaceborne remote sensing system. To remedy that situation we propose building a coastal ocean imaging spectrometer (COIS) with adequate spectral and spatial resolution and high signal to noise to provide long term monitoring and real-time characterization of the coastal environment. COIS would provide a snapshot of the effects of human activities and natural processes, including runoff, tides, currents and storms, on the distributions of phytoplankton, suspended sediments, colored dissolved organic matter, including sediment resuspension and changes in bathymetry. COIS will also be an excellent tool to assess changing land use practices and the health of corps and natural vegetation on the adjacent land areas. This paper reviews the scientific rationale for such an instrument, and the recent scientific and engineering innovations that make it possible to build a small inexpensive spaceborne instrument to meet these requirements.

Coronal Holes and Magnetic Flux Ropes Interweaving Solar Cycles

NASA Astrophysics Data System (ADS)

Lowder, Chris; Yeates, Anthony; Leamon, Robert; Qiu, Jiong

2016-10-01

Coronal holes, dark patches observed in solar observations in extreme ultraviolet and x-ray wavelengths, provide an excellent proxy for regions of open magnetic field rooted near the photosphere. Through a multi-instrument approach, including SDO data, we are able to stitch together high resolution maps of coronal hole boundaries spanning the past two solar activity cycles. These observational results are used in conjunction with models of open magnetic field to probe physical solar parameters. Magnetic flux ropes are commonly defined as bundles of solar magnetic field lines, twisting around a common axis. Photospheric surface flows and magnetic reconnection work in conjunction to form these ropes, storing magnetic stresses until eruption. With an automated methodology to identify flux ropes within observationally driven magnetofrictional simulations, we can study their properties in detail. Of particular interest is a solar-cycle length statistical description of eruption rates, spatial distribution, magnetic orientation, flux, and helicity. Coronal hole observations can provide useful data about the distribution of the fast solar wind, with magnetic flux ropes yielding clues as to ejected magnetic field and the resulting space weather geo-effectiveness. With both of these cycle-spanning datasets, we can begin to form a more detailed picture of the evolution and consequences of both sets of solar magnetic features.

Lung function imaging methods in Cystic Fibrosis pulmonary disease.

PubMed

Kołodziej, Magdalena; de Veer, Michael J; Cholewa, Marian; Egan, Gary F; Thompson, Bruce R

2017-05-17

Monitoring of pulmonary physiology is fundamental to the clinical management of patients with Cystic Fibrosis. The current standard clinical practise uses spirometry to assess lung function which delivers a clinically relevant functional readout of total lung function, however does not supply any visible or localised information. High Resolution Computed Tomography (HRCT) is a well-established current 'gold standard' method for monitoring lung anatomical changes in Cystic Fibrosis patients. HRCT provides excellent morphological information, however, the X-ray radiation dose can become significant if multiple scans are required to monitor chronic diseases such as cystic fibrosis. X-ray phase-contrast imaging is another emerging X-ray based methodology for Cystic Fibrosis lung assessment which provides dynamic morphological and functional information, albeit with even higher X-ray doses than HRCT. Magnetic Resonance Imaging (MRI) is a non-ionising radiation imaging method that is garnering growing interest among researchers and clinicians working with Cystic Fibrosis patients. Recent advances in MRI have opened up the possibilities to observe lung function in real time to potentially allow sensitive and accurate assessment of disease progression. The use of hyperpolarized gas or non-contrast enhanced MRI can be tailored to clinical needs. While MRI offers significant promise it still suffers from poor spatial resolution and the development of an objective scoring system especially for ventilation assessment.

REAL-PANLAR Project for the Implementation and Accreditation of Centers of Excellence in Rheumatoid Arthritis Throughout Latin America

PubMed Central

Santos-Moreno, Pedro; Galarza-Maldonado, Claudio; Caballero-Uribe, Carlo V.; Cardiel, Mario H.; Massardo, Loreto; Soriano, Enrique R.; Olano, José Aguilar; Díaz Coto, José F.; Durán Pozo, Gabriel R.; da Silveira, Inês Guimarães; de Castrejón, Vianna J. Khoury; Pérez, Leticia Lino; Méndez Justo, Carlos A.; Montufar Guardado, Rubén A.; Muños, Rafael; Elvir, Sergio Murillo; Paredes Domínguez, Ernesto R.; Pons-Estel, Bernardo; Ríos Acosta, Carlos R.; Sandino, Sayonara; Toro Gutiérrez, Carlos E.; Villegas de Morales, Sol María; Pineda, Carlos

2015-01-01

Objective A consensus meeting of representatives of 16 Latin American and Caribbean countries and the REAL-PANLAR group met in the city of Bogota to provide recommendations for improving quality of care of patients with rheumatoid arthritis (RA) in Latin America, defining a minimum standards of care and the concept of center of excellence in RA. Methods Twenty-two rheumatologists from 16 Latin American countries with a special interest in quality of care in RA participated in the consensus meeting. Two RA Colombian patients and 2 health care excellence advisors were also invited to the meeting. A RAND-modified Delphi procedure of 5 steps was applied to define categories of centers of excellence. During a 1-day meeting, working groups were created in order to discuss and validate the minimum quality-of-care standards for the 3 proposed types of centers of excellence in RA. Positive votes from at least 60% of the attending leaders were required for the approval of each standard. Results Twenty-two opinion leaders from the PANLAR countries and the REAL-PANLAR group participated in the discussion and definition of the standards. One hundred percent of the participants agreed with setting up centers of excellence in RA throughout Latin America. Three types of centers of excellence and its criteria were defined, according to indicators of structure, processes, and outcomes: standard, optimal, and model. The standard level should have basic structure and process indicators, the intermediate or optimal level should accomplish more structure and process indicators, and model level should also fulfill outcome indicators and patient experience. Conclusions This is the first Latin American effort to standardize and harmonize the treatment provided to RA patients and to establish centers of excellence that would offer to RA patients acceptable clinical results and high levels of safety. PMID:26010179

Geostatistics: a new tool for describing spatially-varied surface conditions from timber harvested and burned hillslopes

Treesearch

Peter R. Robichaud

1997-01-01

Geostatistics provides a method to describe the spatial continuity of many natural phenomena. Spatial models are based upon the concept of scaling, kriging and conditional simulation. These techniques were used to describe the spatially-varied surface conditions on timber harvest and burned hillslopes. Geostatistical techniques provided estimates of the ground cover (...

Spatial Thinking Assists Geographic Thinking: Evidence from a Study Exploring the Effects of Geospatial Technology

ERIC Educational Resources Information Center

Metoyer, Sandra; Bednarz, Robert

2017-01-01

This article provides a description and discussion of an exploratory research study that examined the effects of using geospatial technology (GST) on high school students' spatial skills and spatial-relations content knowledge. It presents results that support the use of GST to teach spatially dependent content. It also provides indication of an…

V-378A: A modified bismaleimide for advanced composites

NASA Technical Reports Server (NTRS)

Street, S. W.

1985-01-01

Addition polyimides cure with no evolution of gaseous by-products at relatively low temperatures and may be cured at low pressures to yield composites with excellent hot-wet strength retention. These properaties have made them excellent candidates as matrix resins for advanced composites. However, commercially available bismaleimides are solids and difficult to handle in preimpregnated form. V-378A is an addition polyimide composed of a mixture of bismaleimides and other reactive ingredients formulated to provide good prepreg properties and handling, facile cure and excellent composite mechanical properties. Several curing mechanisms are utilized to provide the characteristics exhibited by V-378A. Part of the mechanism is free radial and takes place at ambient temperature and above. Other mechanisms are principally Diels-Alder in nature. V-378A prepregs are tacky at ambient temperature, but do not have long tacky outlife similar to some epoxies. V-378A yields composites which exhibit hot-wet strength retention which is superior to that provided by epoxy resin systems.

Evaluation of Patient Satisfaction Surveys in Pediatric Orthopaedics.

PubMed

Segal, Lee S; Plantikow, Carla; Hall, Randon; Wilson, Kristina; Shrader, M Wade

2015-01-01

Patient satisfaction survey scores are increasingly being tied to incentive compensation, impact how we practice medicine, influence decisions on where patients seek care, and in the future may be required for accreditation. The goal of this study is to compare the results of an internal distribution of patient satisfaction surveys at the point of care to responses received by mail in a hospital-based, high-volume pediatric orthopaedic practice. A pediatric outpatient survey is used at our institution to evaluate patient satisfaction. Surveys are randomly mailed out to families seen in our clinic by the survey vendor, and the results are determined on a quarterly basis. We distributed the same survey in a similar manner in our clinic. The results of the surveys, external/mailed (EXM) versus internal/point of care (INP) over the same 3-month time period (second quarter 2013) were compared. The survey questions are dichotomized from an ordinal scale into either excellent (9 to 10) or not excellent (0 to 8) commonly used in patient satisfaction methodology. We evaluated the raw data from the INP surveys for the question on provider rating by evaluating the mean score, the standard excellent response (9 to 10), and an expanded excellent response (8 to 10). Response rate was 72/469 (15.4%) for EXM, and 231/333 (69.4%) for INP. An excellent response for the "rating your provider" question was 72.2% (EXM) versus 84.8% (INP) (P=0.015). Our analysis of the raw data (INP) has a mean rating of 9.42. The expanded scale (8 to 10) for an excellent response increased the provider rating to 94.4% (P=0.001). Waiting time response within 15 minutes was the only item that correlated with rating of provider (P=0.02). For the majority of the items, the INP responses were consistently higher than the EXM responses, including 6/7 responses that were statistically significant (P<0.05). As mandated by the Centers for Medicare and Medicaid Services, patient satisfaction surveys will be important in determining health care outcomes. Properly designed and administered surveys provide robust measures of quality. Our study reinforces methodological concerns about patient satisfaction surveys distributed in a high-volume pediatric subspecialty practice. Further research is needed to evaluate the patients' health care experience and true quality of care in pediatric subspecialty ambulatory settings.

An Opportunity Culture for Teaching and Learning: Introduction

ERIC Educational Resources Information Center

Public Impact, 2015

2015-01-01

For excellent teachers and those aspiring to excellence, and for administrative or education policy leaders, this brief provides an overview of how an Opportunity Culture can help teachers have the well-paid, empowered profession they deserve--while helping many more students succeed. [For the full report, see ED560179; for the summary, see…

Project Excel: A Model for an Individually Focused Staff Development Program.

ERIC Educational Resources Information Center

Minix, Nancy A.; Pearce, Winston Thomas

A description is given of the development and implementation of an inservice program, "Project Excel," which was designed in accordance with andragogical theory. This theory is based upon four major assumptions: (1) as people grow, they become increasingly self-directed; (2) as people grow, a reservoir of experiences which provide a…

Knowledge Wisdom and Networks: A Project Management Centre of Excellence Example

ERIC Educational Resources Information Center

Walker, Derek H. T.; Christenson, Dale

2005-01-01

Purpose: This conceptual paper aims to explain how "project management centres of excellence (CoEs)", a particular class of knowledge network, can be viewed as providing great potential for assisting project management (PM) teams to make wise decisions. Design/methodology/approach: The paper presents a range of knowledge network types and…

Production and Injection data for NV Binary facilities

DOE Data Explorer

Mines, Greg

2013-12-24

Excel files are provided with well production and injection data for binary facilities in Nevada. The files contain the data that reported montly to the Nevada Bureau of Mines and Geology (NBMG) by the facility operators. this data has been complied into Excel spreadsheets for each of the facilities given on the NBMG web site.

Academic Work and Educational Excellence. Raising Student Productivity.

ERIC Educational Resources Information Center

Tomlinson, Tommy M., Ed.; Walberg, Herbert J., Ed.

The papers presented in this book were selected from some 40 papers commissioned by the National Commission on Excellence in Education. The papers provided the commission with background information for its deliberations prior to the preparation of its report entitled "A Nation at Risk: The Imperative for Educational Reform." The following papers…

Science/Technology/Society. Focus on Excellence, Volume 1, Number 5.

ERIC Educational Resources Information Center

Penick, John E., Ed.; Meinhard-Pellens, Richard, Ed.

This document describes 10 examples of innovative and outstanding science/technology/society (STS) programs. These programs were selected using state criteria and at least four independent reviewers. While Project Synthesis offered a desired state, these examples of excellence provided views of what is already a reality. The goals of an exemplary…

Teaching Excellence Awards: An Apple for the Teacher?

ERIC Educational Resources Information Center

Mackenzie, Noella

2007-01-01

In this article the status of teaching as a profession and the morale of teachers in Australian schools in the current era provide a framework for the examination of the intent and outcomes of teaching excellence awards. The research study applied an interpretive research paradigm and used both qualitative and quantitative data collection methods.…

Excellence within Student Affairs: Understanding the Practice of Integrating Academic and Student Affairs

ERIC Educational Resources Information Center

Ozaki, C. Casey; Hornak, Anne M.

2014-01-01

In this final chapter, the authors synthesize and draw from chapters across this volume to provide concluding remarks and recommendations. The authors suggest that core to the discussion of excellence of student affairs in community colleges are the concepts of integration and collaboration. As professionals tasked with supporting the student…

Striving for Excellence. Final Report to SPD1 Motorola.

ERIC Educational Resources Information Center

Merex Corp., Tempe, AZ.

In 1988 SPD1, a division of Motorola, began an extensive 4-year endeavor to transform itself into an organization built on excellence and customer satisfaction. SPD1 contracted with Merex Corporation to provide three services that would enable employees to take on their new responsibilities more effectively. Merex conducted Skills Enhancement…

Continuing Education and the Pursuit of Excellence. NCCSCE Working Paper Series.

ERIC Educational Resources Information Center

Mitchell, Helen Buss

Adapting the principles outlined in "In Search of Excellence: Lessons from America's Best Run Companies" (Thomas J. Peters and Robert H. Waterman, Jr.) to the operations of continuing education departments, this paper discusses eight rules for success and provides examples of their application. Rule One, "Bias for Action," emphasizes the…

Excellence in University Academic Staff Evaluation: A Problematic Reality?

ERIC Educational Resources Information Center

O'Connor, Pat; O'Hagan, Clare

2016-01-01

This article is concerned with the macro-cultural ideal or institutional myth of excellence as defined and used in the evaluation of academic staff as part of an institutional logic. Such logics "prescribe what constitutes legitimate behaviour and provide taken-for-granted conceptions of what goals are appropriate and what means are…

The Complete Picture: "Standards for Technological Literacy" and "Advancing Excellence in Technological Literacy."

ERIC Educational Resources Information Center

Technology Teacher, 2003

2003-01-01

Provides an overview of the "Standards for Technological Literacy: Content for the Study of Technology" (STL) and "Advancing Excellence in Technological Literacy: Student Assessment, Professional Development, and Program Standards" (AETL). Shows how the documents work together to advance the technological literacy of technology educators and K-12…

Illustrating Consumer Theory with the CES Utility Function

ERIC Educational Resources Information Center

Tohamy, Soumaya M.; Mixon, J. Wilson, Jr.

2004-01-01

The authors use Microsoft Excel to derive compensated and uncompensated demand curves. They use a constant elasticity of substitution (CES) utility function to show how changes in a good's price or income affect the quantities demanded of that good and of the other composite good, using Excel's Solver. They provide three contributions. First, they…

Excel Yourself with Personalised Email Messages

ERIC Educational Resources Information Center

McClean, Stephen

2008-01-01

Combining the Excel spreadsheet with an email program provides a very powerful tool for sending students personalised emails. Most email clients now support a Mail Merge facility whereby a generic template is created and information unique to each student record in the spreadsheet is filled into that template, generating tens if not hundreds of…

Leveraging geotagged Twitter data to examine neighborhood happiness, diet, and physical activity

PubMed Central

Nguyen, Quynh C; Kath, Suraj; Meng, Hsien-Wen; Li, Dapeng; Smith, Ken Robert; VanDerslice, James A.; Wen, Ming; Li, Feifei

2016-01-01

Objectives Using publicly available, geotagged Twitter data, we created neighborhood indicators for happiness, food and physical activity for three large counties: Salt Lake, San Francisco and New York. Methods We utilize 2.8 million tweets collected between February-August 2015 in our analysis. Geo-coordinates of where tweets were sent allow us to spatially join them to 2010 census tract locations. We implemented quality control checks and tested associations between Twitter-derived variables and sociodemographic characteristics. Results For a random subset of tweets, manually labeled tweets and algorithm labeled tweets had excellent levels of agreement: 73% for happiness; 83% for food, and 85% for physical activity. Happy tweets, healthy food references, and physical activity references were less frequent in census tracts with greater economic disadvantage and higher proportions of racial/ethnic minorities and youths. Conclusions Social media can be leveraged to provide greater understanding of the well-being and health behaviors of communities—information that has been previously difficult and expensive to obtain consistently across geographies. More open access neighborhood data can enable better design of programs and policies addressing social determinants of health. PMID:28533568

Data regarding hydraulic fracturing distributions and treatment fluids, additives, proppants, and water volumes applied to wells drilled in the United States from 1947 through 2010

USGS Publications Warehouse

Gallegos, Tanya J.; Varela, Brian A.

2015-01-01

Comprehensive, published, and publicly available data regarding the extent, location, and character of hydraulic fracturing in the United States are scarce. The objective of this data series is to publish data related to hydraulic fracturing in the public domain. The spreadsheets released with this data series contain derivative datasets aggregated temporally and spatially from the commercial and proprietary IHS database of U.S. oil and gas production and well data (IHS Energy, 2011). These datasets, served in 21 spreadsheets in Microsoft Excel (.xlsx) format, outline the geographical distributions of hydraulic fracturing treatments and associated wells (including well drill-hole directions) as well as water volumes, proppants, treatment fluids, and additives used in hydraulic fracturing treatments in the United States from 1947 through 2010. This report also describes the data—extraction/aggregation processing steps, field names and descriptions, field types and sources. An associated scientific investigation report (Gallegos and Varela, 2014) provides a detailed analysis of the data presented in this data series and comparisons of the data and trends to the literature.

Silk protein nanowires patterned using electron beam lithography.

PubMed

Pal, Ramendra K; Yadavalli, Vamsi K

2018-08-17

Nanofabrication approaches to pattern proteins at the nanoscale are useful in applications ranging from organic bioelectronics to cellular engineering. Specifically, functional materials based on natural polymers offer sustainable and environment-friendly substitutes to synthetic polymers. Silk proteins (fibroin and sericin) have emerged as an important class of biomaterials for next generation applications owing to excellent optical and mechanical properties, inherent biocompatibility, and biodegradability. However, the ability to precisely control their spatial positioning at the nanoscale via high throughput tools continues to remain a challenge. In this study electron beam lithography (EBL) is used to provide nanoscale patterning using methacrylate conjugated silk proteins that are photoreactive 'photoresists' materials. Very low energy electron beam radiation can be used to pattern silk proteins at the nanoscale and over large areas, whereby such nanostructure fabrication can be performed without specialized EBL tools. Significantly, using conducting polymers in conjunction with these silk proteins, the formation of protein nanowires down to 100 nm is shown. These wires can be easily degraded using enzymatic degradation. Thus, proteins can be precisely and scalably patterned and doped with conducting polymers and enzymes to form degradable, organic bioelectronic devices.

Temporal complexity in emission from Anderson localized lasers

NASA Astrophysics Data System (ADS)

Kumar, Randhir; Balasubrahmaniyam, M.; Alee, K. Shadak; Mujumdar, Sushil

2017-12-01

Anderson localization lasers exploit resonant cavities formed due to structural disorder. The inherent randomness in the structure of these cavities realizes a probability distribution in all cavity parameters such as quality factors, mode volumes, mode structures, and so on, implying resultant statistical fluctuations in the temporal behavior. Here we provide direct experimental measurements of temporal width distributions of Anderson localization lasing pulses in intrinsically and extrinsically disordered coupled-microresonator arrays. We first illustrate signature exponential decays in the spatial intensity distributions of the lasing modes that quantify their localized character, and then measure the temporal width distributions of the pulsed emission over several configurations. We observe a dependence of temporal widths on the disorder strength, wherein the widths show a single-peaked, left-skewed distribution in extrinsic disorder and a dual-peaked distribution in intrinsic disorder. We propose a model based on coupled rate equations for an emitter and an Anderson cavity with a random mode structure, which gives excellent quantitative and qualitative agreement with the experimental observations. The experimental and theoretical analyses bring to the fore the temporal complexity in Anderson-localization-based lasing systems.

Thermodynamic properties of water solvating biomolecular surfaces

NASA Astrophysics Data System (ADS)

Heyden, Matthias

Changes in the potential energy and entropy of water molecules hydrating biomolecular interfaces play a significant role for biomolecular solubility and association. Free energy perturbation and thermodynamic integration methods allow calculations of free energy differences between two states from simulations. However, these methods are computationally demanding and do not provide insights into individual thermodynamic contributions, i.e. changes in the solvent energy or entropy. Here, we employ methods to spatially resolve distributions of hydration water thermodynamic properties in the vicinity of biomolecular surfaces. This allows direct insights into thermodynamic signatures of the hydration of hydrophobic and hydrophilic solvent accessible sites of proteins and small molecules and comparisons to ideal model surfaces. We correlate dynamic properties of hydration water molecules, i.e. translational and rotational mobility, to their thermodynamics. The latter can be used as a guide to extract thermodynamic information from experimental measurements of site-resolved water dynamics. Further, we study energy-entropy compensations of water at different hydration sites of biomolecular surfaces. This work is supported by the Cluster of Excellence RESOLV (EXC 1069) funded by the Deutsche Forschungsgemeinschaft.

Towards excimer-laser-based stereolithography: a rapid process to fabricate rigid biodegradable photopolymer scaffolds

PubMed Central

Beke, S.; Anjum, F.; Tsushima, H.; Ceseracciu, L.; Chieregatti, E.; Diaspro, A.; Athanassiou, A.; Brandi, F.

2012-01-01

We demonstrate high-resolution photocross-linking of biodegradable poly(propylene fumarate) (PPF) and diethyl fumarate (DEF) using UV excimer laser photocuring at 308 nm. The curing depth can be tuned in a micrometre range by adjusting the total energy dose (total fluence). Young's moduli of the scaffolds are found to be a few gigapascal, high enough to support bone formation. The results presented here demonstrate that the proposed technique is an excellent tool for the fabrication of stiff and biocompatible structures on a micrometre scale with defined patterns of high resolution in all three spatial dimensions. Using UV laser photocuring at 308 nm will significantly improve the speed of rapid prototyping of biocompatible and biodegradable polymer scaffolds and enables its production in a few seconds, providing high lateral and horizontal resolution. This short timescale is indeed a tremendous asset that will enable a more efficient translation of technology to clinical applications. Preliminary cell tests proved that PPF : DEF scaffolds produced by excimer laser photocuring are biocompatible and, therefore, are promising candidates to be applied in tissue engineering and regenerative medicine. PMID:22696484

Design of Single-Site Photocatalyst using Metal-Organic Framework as Matrix.

PubMed

Wen, Meicheng; Mori, Kohsuke; Kuwahara, Yasutaka; An, Taicheng; Yamashita, Hiromi

2018-05-14

Single-site photocatalyst generally displays excellent photocatalytic activtiy and considerable high stability as compared to homogeneous catalytic system. A rational structural design of single-site photocatalyst with isolated, uniform and spatially separated active sites in a given solid is of prime importance to achieve high photocatalytic activity. Intense attentions have been focused on the engineering and fabrication of single-site photocatalys by using porous materials as platform. Metal-organic frameworks (MOFs) hold great potential for the design and fabrication of single-site photocatalysts due to their remarkable porosity, ultrahigh surface area, extraordinary tailorability and significant diversity. MOFs can provide abundant number of binding sites for anchoring active sites, result in significant enhancement of photocatalytic performance. In this focus review, the development of single-site MOF photocatalysts that perform in important and challenging chemical redox reaction such as photocatalytic water splitting, photocatalytic CO₂ conversion and organic transformations is summarized thoroughly. The successful strategies applied for the construction of single-site MOF photocatalysts and major challenge toward practical application was summarized and pointed out, respectively. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Listening to light scattering in turbid media: quantitative optical scattering imaging using photoacoustic measurements with one-wavelength illumination

NASA Astrophysics Data System (ADS)

Yuan, Zhen; Li, Xiaoqi; Xi, Lei

2014-06-01

Biomedical photoacoustic tomography (PAT), as a potential imaging modality, can visualize tissue structure and function with high spatial resolution and excellent optical contrast. It is widely recognized that the ability of quantitatively imaging optical absorption and scattering coefficients from photoacoustic measurements is essential before PAT can become a powerful imaging modality. Existing quantitative PAT (qPAT), while successful, has been focused on recovering absorption coefficient only by assuming scattering coefficient a constant. An effective method for photoacoustically recovering optical scattering coefficient is presently not available. Here we propose and experimentally validate such a method for quantitative scattering coefficient imaging using photoacoustic data from one-wavelength illumination. The reconstruction method developed combines conventional PAT with the photon diffusion equation in a novel way to realize the recovery of scattering coefficient. We demonstrate the method using various objects having scattering contrast only or both absorption and scattering contrasts embedded in turbid media. The listening-to-light-scattering method described will be able to provide high resolution scattering imaging for various biomedical applications ranging from breast to brain imaging.

Nowcasting and forecasting of lightning activity: the Talos project.

NASA Astrophysics Data System (ADS)

Lagouvardos, Kostas; Kotroni, Vassiliki; Kazadzis, Stelios; Giannaros, Theodore; Karagiannidis, Athanassios; Galanaki, Elissavet; Proestakis, Emmanouil

2015-04-01

Thunder And Lightning Observing System (TALOS) is a research program funded by the Greek Ministry of Education with the aim to promote excellence in the field of lightning meteorology. The study focuses on exploring the real-time observations provided by the ZEUS lightning detection system, operated by the National Observatory of Athens since 2005, as well as the 10-year long database of the same system. More precisely the main research issues explored are: - lightning climatology over the Mediterranean focusing on lightning spatial and temporal distribution, on the relation of lightning with topographical features and instability and on the importance of aerosols in lightning initiation and enhancement. - nowcasting of lightning activity over Greece, with emphasis on the operational aspects of this endeavour. The nowcasting tool is based on the use of lightning data complemented by high-time resolution METEOSAT imagery. - forecasting of lightning activity over Greece based on the use of WRF numerical weather prediction model. - assimilation of lightning with the aim to improve the model precipitation forecast skill. In the frame of this presentation the main findings of each of the aforementioned issues are highlighted.

Sound Emission of Rotor Induced Deformations of Generator Casings

NASA Technical Reports Server (NTRS)

Polifke, W.; Mueller, B.; Yee, H. C.; Mansour, Nagi (Technical Monitor)

2001-01-01

The casing of large electrical generators can be deformed slightly by the rotor's magnetic field. The sound emission produced by these periodic deformations, which could possibly exceed guaranteed noise emission limits, is analysed analytically and numerically. From the deformation of the casing, the normal velocity of the generator's surface is computed. Taking into account the corresponding symmetry, an analytical solution for the acoustic pressure outside the generator is round in terms of the Hankel function of second order. The normal velocity or the generator surface provides the required boundary condition for the acoustic pressure and determines the magnitude of pressure oscillations. For the numerical simulation, the nonlinear 2D Euler equations are formulated In a perturbation form for low Mach number Computational Aeroacoustics (CAA). The spatial derivatives are discretized by the classical sixth-order central interior scheme and a third-order boundary scheme. Spurious high frequency oscillations are damped by a characteristic-based artificial compression method (ACM) filter. The time derivatives are approximated by the classical 4th-order Runge-Kutta method. The numerical results are In excellent agreement with the analytical solution.

Spiking computation and stochastic amplification in a neuron-like semiconductor microstructure

DOE Office of Scientific and Technical Information (OSTI.GOV)

Samardak, A. S.; Laboratory of Thin Film Technologies, Far Eastern Federal University, Vladivostok 690950; Nogaret, A.

2011-05-15

We have demonstrated the proof of principle of a semiconductor neuron, which has dendrites, axon, and a soma and computes information encoded in electrical pulses in the same way as biological neurons. Electrical impulses applied to dendrites diffuse along microwires to the soma. The soma is the active part of the neuron, which regenerates input pulses above a voltage threshold and transmits them into the axon. Our concept of neuron is a major step forward because its spatial structure controls the timing of pulses, which arrive at the soma. Dendrites and axon act as transmission delay lines, which modify themore » information, coded in the timing of pulses. We have finally shown that noise enhances the detection sensitivity of the neuron by helping the transmission of weak periodic signals. A maximum enhancement of signal transmission was observed at an optimum noise level known as stochastic resonance. The experimental results are in excellent agreement with simulations of the FitzHugh-Nagumo model. Our neuron is therefore extremely well suited to providing feedback on the various mathematical approximations of neurons and building functional networks.« less

Parallel Adjective High-Order CFD Simulations Characterizing SOFIA Cavity Acoustics

NASA Technical Reports Server (NTRS)

Barad, Michael F.; Brehm, Christoph; Kiris, Cetin C.; Biswas, Rupak

2016-01-01

This paper presents large-scale MPI-parallel computational uid dynamics simulations for the Stratospheric Observatory for Infrared Astronomy (SOFIA). SOFIA is an airborne, 2.5-meter infrared telescope mounted in an open cavity in the aft fuselage of a Boeing 747SP. These simulations focus on how the unsteady ow eld inside and over the cavity interferes with the optical path and mounting structure of the telescope. A temporally fourth-order accurate Runge-Kutta, and spatially fth-order accurate WENO- 5Z scheme was used to perform implicit large eddy simulations. An immersed boundary method provides automated gridding for complex geometries and natural coupling to a block-structured Cartesian adaptive mesh re nement framework. Strong scaling studies using NASA's Pleiades supercomputer with up to 32k CPU cores and 4 billion compu- tational cells shows excellent scaling. Dynamic load balancing based on execution time on individual AMR blocks addresses irregular numerical cost associated with blocks con- taining boundaries. Limits to scaling beyond 32k cores are identi ed, and targeted code optimizations are discussed.

Parallel Adaptive High-Order CFD Simulations Characterizing SOFIA Cavitiy Acoustics

NASA Technical Reports Server (NTRS)

Barad, Michael F.; Brehm, Christoph; Kiris, Cetin C.; Biswas, Rupak

2015-01-01

This paper presents large-scale MPI-parallel computational uid dynamics simulations for the Stratospheric Observatory for Infrared Astronomy (SOFIA). SOFIA is an airborne, 2.5-meter infrared telescope mounted in an open cavity in the aft fuselage of a Boeing 747SP. These simulations focus on how the unsteady ow eld inside and over the cavity interferes with the optical path and mounting structure of the telescope. A tempo- rally fourth-order accurate Runge-Kutta, and a spatially fth-order accurate WENO-5Z scheme were used to perform implicit large eddy simulations. An immersed boundary method provides automated gridding for complex geometries and natural coupling to a block-structured Cartesian adaptive mesh re nement framework. Strong scaling studies using NASA's Pleiades supercomputer with up to 32k CPU cores and 4 billion compu- tational cells shows excellent scaling. Dynamic load balancing based on execution time on individual AMR blocks addresses irregular numerical cost associated with blocks con- taining boundaries. Limits to scaling beyond 32k cores are identi ed, and targeted code optimizations are discussed.

Cell Biology of the Caenorhabditis elegans Nucleus

PubMed Central

Cohen-Fix, Orna; Askjaer, Peter

2017-01-01

Studies on the Caenorhabditis elegans nucleus have provided fascinating insight to the organization and activities of eukaryotic cells. Being the organelle that holds the genetic blueprint of the cell, the nucleus is critical for basically every aspect of cell biology. The stereotypical development of C. elegans from a one cell-stage embryo to a fertile hermaphrodite with 959 somatic nuclei has allowed the identification of mutants with specific alterations in gene expression programs, nuclear morphology, or nuclear positioning. Moreover, the early C. elegans embryo is an excellent model to dissect the mitotic processes of nuclear disassembly and reformation with high spatiotemporal resolution. We review here several features of the C. elegans nucleus, including its composition, structure, and dynamics. We also discuss the spatial organization of chromatin and regulation of gene expression and how this depends on tight control of nucleocytoplasmic transport. Finally, the extensive connections of the nucleus with the cytoskeleton and their implications during development are described. Most processes of the C. elegans nucleus are evolutionarily conserved, highlighting the relevance of this powerful and versatile model organism to human biology. PMID:28049702

Biological safety of fish (tilapia) collagen.

PubMed

Yamamoto, Kohei; Igawa, Kazunari; Sugimoto, Kouji; Yoshizawa, Yuu; Yanagiguchi, Kajiro; Ikeda, Takeshi; Yamada, Shizuka; Hayashi, Yoshihiko

2014-01-01

Marine collagen derived from fish scales, skin, and bone has been widely investigated for application as a scaffold and carrier due to its bioactive properties, including excellent biocompatibility, low antigenicity, and high biodegradability and cell growth potential. Fish type I collagen is an effective material as a biodegradable scaffold or spacer replicating the natural extracellular matrix, which serves to spatially organize cells, providing them with environmental signals and directing site-specific cellular regulation. This study was conducted to confirm the safety of fish (tilapia) atelocollagen for use in clinical application. We performed in vitro and in vivo biological studies of medical materials to investigate the safety of fish collagen. The extract of fish collagen gel was examined to clarify its sterility. All present sterility tests concerning bacteria and viruses (including endotoxin) yielded negative results, and all evaluations of cell toxicity, sensitization, chromosomal aberrations, intracutaneous reactions, acute systemic toxicity, pyrogenic reactions, and hemolysis were negative according to the criteria of the ISO and the Ministry of Health, Labour and Welfare of Japan. The present study demonstrated that atelocollagen prepared from tilapia is a promising biomaterial for use as a scaffold in regenerative medicine.

A nudging data assimilation algorithm for the identification of groundwater pumping

NASA Astrophysics Data System (ADS)

Cheng, Wei-Chen; Kendall, Donald R.; Putti, Mario; Yeh, William W.-G.

2009-08-01

This study develops a nudging data assimilation algorithm for estimating unknown pumping from private wells in an aquifer system using measured data of hydraulic head. The proposed algorithm treats the unknown pumping as an additional sink term in the governing equation of groundwater flow and provides a consistent physical interpretation for pumping rate identification. The algorithm identifies the unknown pumping and, at the same time, reduces the forecast error in hydraulic heads. We apply the proposed algorithm to the Las Posas Groundwater Basin in southern California. We consider the following three pumping scenarios: constant pumping rates, spatially varying pumping rates, and temporally varying pumping rates. We also study the impact of head measurement errors on the proposed algorithm. In the case study we seek to estimate the six unknown pumping rates from private wells using head measurements from four observation wells. The results show an excellent rate of convergence for pumping estimation. The case study demonstrates the applicability, accuracy, and efficiency of the proposed data assimilation algorithm for the identification of unknown pumping in an aquifer system.

A nudging data assimilation algorithm for the identification of groundwater pumping

NASA Astrophysics Data System (ADS)

Cheng, W.; Kendall, D. R.; Putti, M.; Yeh, W. W.

2008-12-01

This study develops a nudging data assimilation algorithm for estimating unknown pumping from private wells in an aquifer system using measurement data of hydraulic head. The proposed algorithm treats the unknown pumping as an additional sink term in the governing equation of groundwater flow and provides a consistently physical interpretation for pumping rate identification. The algorithm identifies unknown pumping and, at the same time, reduces the forecast error in hydraulic heads. We apply the proposed algorithm to the Las Posas Groundwater Basin in southern California. We consider the following three pumping scenarios: constant pumping rate, spatially varying pumping rates, and temporally varying pumping rates. We also study the impact of head measurement errors on the proposed algorithm. In the case study, we seek to estimate the six unknown pumping rates from private wells using head measurements from four observation wells. The results show excellent rate of convergence for pumping estimation. The case study demonstrates the applicability, accuracy, and efficiency of the proposed data assimilation algorithm for the identification of unknown pumping in an aquifer system.

Using an Extended Kalman Filter Learning Algorithm for Feed-Forward Neural Networks to Describe Tracer Correlations

NASA Technical Reports Server (NTRS)

Lary, David J.; Mussa, Yussuf

2004-01-01

In this study a new extended Kalman filter (EKF) learning algorithm for feed-forward neural networks (FFN) is used. With the EKF approach, the training of the FFN can be seen as state estimation for a non-linear stationary process. The EKF method gives excellent convergence performances provided that there is enough computer core memory and that the machine precision is high. Neural networks are ideally suited to describe the spatial and temporal dependence of tracer-tracer correlations. The neural network performs well even in regions where the correlations are less compact and normally a family of correlation curves would be required. For example, the CH4-N2O correlation can be well described using a neural network trained with the latitude, pressure, time of year, and CH4 volume mixing ratio (v.m.r.). The neural network was able to reproduce the CH4-N2O correlation with a correlation coefficient between simulated and training values of 0.9997. The neural network Fortran code used is available for download.

GLASS: detailed structure of high redshift galaxies from HST grism spectroscopy

NASA Astrophysics Data System (ADS)

Jones, Tucker; Treu, Tommaso; Schmidt, Kasper B.; Wang, Xin; Brammer, Gabriel; Glass

2015-01-01

The Grism Lens-Amplified Survey from Space (GLASS) is obtaining slitless near-IR spectroscopy of 10 galaxy clusters selected for their strong lensing properties, including all six Hubble Frontier Fields. The GLASS survey will have gathered more than ten thousand spectra upon completion in early 2015. Slitless grism spectra are ideal for mapping emission lines such as [O II], [O III], and Hα at z=1-3 as well as Lyα at z>6. The combination of strong gravitational lensing and HST's diffraction limit provides excellent sensitivity (~1e-18 erg/s/cm2 RMS) with spatial resolution as fine as 100 pc for highly magnified sources, and ~500 pc for less magnified sources near the edge of the field of view. This enables precise measurements of metallicity gradients, the distribution of star formation, and other details of the physical structure of high redshift galaxies with masses as low as ~107 M⊙ at z=2. I will discuss measurements of these physical properties and implications for galaxy evolution based on the largest sample available to date with such high resolution at z>1.

Development of an Excel-based laboratory information management system for improving workflow efficiencies in early ADME screening.

PubMed

Lu, Xinyan

2016-01-01

There is a clear requirement for enhancing laboratory information management during early absorption, distribution, metabolism and excretion (ADME) screening. The application of a commercial laboratory information management system (LIMS) is limited by complexity, insufficient flexibility, high costs and extended timelines. An improved custom in-house LIMS for ADME screening was developed using Excel. All Excel templates were generated through macros and formulae, and information flow was streamlined as much as possible. This system has been successfully applied in task generation, process control and data management, with a reduction in both labor time and human error rates. An Excel-based LIMS can provide a simple, flexible and cost/time-saving solution for improving workflow efficiencies in early ADME screening.

Learning what children know about space from looking at their hands: The added value of gesture in spatial communication

PubMed Central

Sauter, Megan; Uttal, David H.; Alman, Amanda Schaal; Goldin-Meadow, Susan; Levine, Susan C.

2013-01-01

This article examines two issues: the role of gesture in the communication of spatial information and the relation between communication and mental representation. Children (8–10 years) and adults walked through a space to learn the locations of six hidden toy animals and then explained the space to another person. In Study 1, older children and adults typically gestured when describing the space and rarely provided spatial information in speech without also providing the information in gesture. However, few 8-year-olds communicated spatial information in speech or gesture. Studies 2 and 3 showed that 8-year-olds did understand the spatial arrangement of the animals and could communicate spatial information if prompted to use their hands. Taken together, these results indicate that gesture is important for conveying spatial relations at all ages and, as such, provides us with a more complete picture of what children do and do not know about communicating spatial relations. PMID:22209401

Measuring functional connectivity using MEG: Methodology and comparison with fcMRI

PubMed Central

Brookes, Matthew J.; Hale, Joanne R.; Zumer, Johanna M.; Stevenson, Claire M.; Francis, Susan T.; Barnes, Gareth R.; Owen, Julia P.; Morris, Peter G.; Nagarajan, Srikantan S.

2011-01-01

Functional connectivity (FC) between brain regions is thought to be central to the way in which the brain processes information. Abnormal connectivity is thought to be implicated in a number of diseases. The ability to study FC is therefore a key goal for neuroimaging. Functional connectivity (fc) MRI has become a popular tool to make connectivity measurements but the technique is limited by its indirect nature. A multimodal approach is therefore an attractive means to investigate the electrodynamic mechanisms underlying hemodynamic connectivity. In this paper, we investigate resting state FC using fcMRI and magnetoencephalography (MEG). In fcMRI, we exploit the advantages afforded by ultra high magnetic field. In MEG we apply envelope correlation and coherence techniques to source space projected MEG signals. We show that beamforming provides an excellent means to measure FC in source space using MEG data. However, care must be taken when interpreting these measurements since cross talk between voxels in source space can potentially lead to spurious connectivity and this must be taken into account in all studies of this type. We show good spatial agreement between FC measured independently using MEG and fcMRI; FC between sensorimotor cortices was observed using both modalities, with the best spatial agreement when MEG data are filtered into the β band. This finding helps to reduce the potential confounds associated with each modality alone: while it helps reduce the uncertainties in spatial patterns generated by MEG (brought about by the ill posed inverse problem), addition of electrodynamic metric confirms the neural basis of fcMRI measurements. Finally, we show that multiple MEG based FC metrics allow the potential to move beyond what is possible using fcMRI, and investigate the nature of electrodynamic connectivity. Our results extend those from previous studies and add weight to the argument that neural oscillations are intimately related to functional connectivity and the BOLD response. PMID:21352925

Properties and Frequency Conversion of High-Brightness Diode-Laser Systems

NASA Astrophysics Data System (ADS)

Boller, Klaus-Jochen; Beier, Bernard; Wallenstein, Richard

An overview of recent developments in the field of high-power, high-brightness diode-lasers, and the optically nonlinear conversion of their output into other wavelength ranges, is given. We describe the generation of continuous-wave (CW) laser beams at power levels of several hundreds of milliwatts to several watts with near-perfect spatial and spectral properties using Master-Oscillator Power-Amplifier (MOPA) systems. With single- or double-stage systems, using amplifiers of tapered or rectangular geometry, up to 2.85 W high-brightness radiation is generated at wavelengths around 810nm with AlGaAs diodes. Even higher powers, up to 5.2W of single-frequency and high spatial quality beams at 925nm, are obtained with InGaAs diodes. We describe the basic properties of the oscillators and amplifiers used. A strict proof-of-quality for the diode radiation is provided by direct and efficient nonlinear optical conversion of the diode MOPA output into other wavelength ranges. We review recent experiments with the highest power levels obtained so far by direct frequency doubling of diode radiation. In these experiments, 100mW single-frequency ultraviolet light at 403nm was generated, as well as 1W of single-frequency blue radiation at 465nm. Nonlinear conversion of diode radiation into widely tunable infrared radiation has recently yielded record values. We review the efficient generation of widely tunable single-frequency radiation in the infrared with diode-pumped Optical Parametric Oscillators (OPOs). With this system, single-frequency output radiation with powers of more than 0.5W was generated, widely tunable around wavelengths of 2.1,m and 1.65,m and with excellent spectral and spatial quality. These developments are clear indicators of recent advances in the field of high-brightness diode-MOPA systems, and may emphasize their future central importance for applications within a vast range of optical wavelengths.

Role of highway traffic on spatial and temporal distributions of air pollutants in a Swiss Alpine valley.

PubMed

Ducret-Stich, Regina E; Tsai, Ming-Yi; Ragettli, Martina S; Ineichen, Alex; Kuenzli, Nino; Phuleria, Harish C

2013-07-01

Traffic-related air pollutants show high spatial variability near roads, posing a challenge to adequately assess exposures. Recent modeling approaches (e.g. dispersion models, land-use regression (LUR) models) have addressed this but mostly in urban areas where traffic is abundant. In contrast, our study area was located in a rural Swiss Alpine valley crossed by the main North-south transit highway of Switzerland. We conducted an extensive measurement campaign collecting continuous nitrogen dioxide (NO₂), particulate number concentrations (PN), daily respirable particulate matter (PM10), elemental carbon (EC) and organic carbon (OC) at one background, one highway and seven mobile stations from November 2007 to June 2009. Using these measurements, we built a hybrid model to predict daily outdoor NO₂ concentrations at residences of children participating in an asthma panel study. With the exception of OC, daily variations of the pollutants followed the temporal trends of heavy-duty traffic counts on the highway. In contrast, variations of weekly/seasonal means were strongly determined by meteorological conditions, e.g., winter inversion episodes. For pollutants related to primary exhaust emissions (i.e. NO₂, EC and PN) local spatial variation strongly depended on proximity to the highway. Pollutant concentrations decayed to background levels within 150 to 200 m from the highway. Two separate daily NO₂ prediction models were built using LUR approaches with (a) short-term traffic and weather data (model 1) and (b) subsequent addition of daily background NO₂ to previous model (model 2). Models 1 and 2 explained 70% and 91% of the variability in outdoor NO₂ concentrations, respectively. The biweekly averaged predictions from the final model 2 agreed very well with the independent biweekly integrated passive measurements taken at thirteen homes and nine community sites (validation R(2)=0.74). The excellent spatio-temporal performance of our model provides a very promising basis for the health effect assessment of the panel study. Copyright © 2013 Elsevier B.V. All rights reserved.

Key clinical benefits of neuroimaging at 7T.

PubMed

Trattnig, Siegfried; Springer, Elisabeth; Bogner, Wolfgang; Hangel, Gilbert; Strasser, Bernhard; Dymerska, Barbara; Cardoso, Pedro Lima; Robinson, Simon Daniel

2018-03-01

The growing interest in ultra-high field MRI, with more than 35.000 MR examinations already performed at 7T, is related to improved clinical results with regard to morphological as well as functional and metabolic capabilities. Since the signal-to-noise ratio increases with the field strength of the MR scanner, the most evident application at 7T is to gain higher spatial resolution in the brain compared to 3T. Of specific clinical interest for neuro applications is the cerebral cortex at 7T, for the detection of changes in cortical structure, like the visualization of cortical microinfarcts and cortical plaques in Multiple Sclerosis. In imaging of the hippocampus, even subfields of the internal hippocampal anatomy and pathology may be visualized with excellent spatial resolution. Using Susceptibility Weighted Imaging, the plaque-vessel relationship and iron accumulations in Multiple Sclerosis can be visualized, which may provide a prognostic factor of disease. Vascular imaging is a highly promising field for 7T which is dealt with in a separate dedicated article in this special issue. The static and dynamic blood oxygenation level-dependent contrast also increases with the field strength, which significantly improves the accuracy of pre-surgical evaluation of vital brain areas before tumor removal. Improvement in acquisition and hardware technology have also resulted in an increasing number of MR spectroscopic imaging studies in patients at 7T. More recent parallel imaging and short-TR acquisition approaches have overcome the limitations of scan time and spatial resolution, thereby allowing imaging matrix sizes of up to 128×128. The benefits of these acquisition approaches for investigation of brain tumors and Multiple Sclerosis have been shown recently. Together, these possibilities demonstrate the feasibility and advantages of conducting routine diagnostic imaging and clinical research at 7T. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

Contributions to Climate Research Using the AIRS Science Team Version-5 Products

NASA Technical Reports Server (NTRS)

Susskind, Joel; Molnar, Gyula; Iredell, Lena

2011-01-01

This paper compares recent spatial anomaly time series of OLR (Outgoing Longwave Radiation) and OLRCLR (Clear Sky OLR) as determined using CERES and AIRS observations over the time period September 2002 through June 2010. We find excellent agreement in OLR anomaly time series of both data sets in almost every detail, down to the 1 x 1 spatial grid point level. This extremely close agreement of OLR anomaly time series derived from observations by two different instruments implies that both sets of results must be highly stable. This agreement also validates to some extent the anomaly time series of the AIRS derived products used in the computation of the AIRS OLR product. The paper then examines anomaly time series of AIRS derived products over the extended time period September 2002 through April 2011. We show that OLR anomalies during this period are closely in phase with those of an El Nino index, and that recent global and tropical mean decreases in OLR and OLR(sub CLR) are a result of a transition from an El Nino condition at the beginning of the data record to La Nina conditions toward the end of the data period. This relationship can be explained by temporal changes of the distribution of mid-tropospheric water vapor and cloud cover in two spatial regions that are in direct response to El Nino/La Nina activity which occurs outside these spatial regions

Design and performance of a high spatial resolution, time-of-flight PET detector

PubMed Central

Krishnamoorthy, Srilalan; LeGeyt, Benjamin; Werner, Matthew E.; Kaul, Madhuri; Newcomer, F. M.; Karp, Joel S.; Surti, Suleman

2014-01-01

This paper describes the design and performance of a high spatial resolution PET detector with time-of-flight capabilities. With an emphasis on high spatial resolution and sensitivity, we initially evaluated the performance of several 1.5 × 1.5 and 2.0 × 2.0 mm2 and 12–15 mm long LYSO crystals read out by several appropriately sized PMTs. Experiments to evaluate the impact of reflector on detector performance were performed and the final detector consisted of a 32 × 32 array of 1.5 × 1.5 × 15 mm3 LYSO crystals packed with a diffuse reflector and read out by a single Hamamatsu 64 channel multi-anode PMT. Such a design made it compact, modular and offered a cost-effective solution to obtaining excellent energy and timing resolution. To minimize the number of readout signals, a compact front-end readout electronics that summed anode signals along each of the orthogonal directions was also developed. Experimental evaluation of detector performance demonstrates clear discrimination of the crystals within the detector. An average energy resolution (FWHM) of 12.7 ± 2.6% and average coincidence timing resolution (FWHM) of 348 ps was measured, demonstrating suitability for use in the development of a high spatial resolution time-of-flight scanner for dedicated breast PET imaging. PMID:25246711

Taylor spatial frame fixation in patients with multiple traumatic injuries: study of 57 long-bone fractures.

PubMed

Sala, Francesco; Elbatrawy, Yasser; Thabet, Ahmed M; Zayed, Mahmoud; Capitani, Dario

2013-08-01

To evaluate the Taylor spatial frame (TSF) for primary and definitive fixation of lower limb long-bone fractures in patients with multiple traumatic injuries. Retrospective. Level I trauma center. Consecutive series of 52 patients, 57 fractures (25 femoral and 32 tibial), treated between 2005 and 2009. Forty-nine fractures (86%) were open. Injury Severity Score ≥16 for all patients. Fifty-four fractures (95%) underwent definitive fixation with the TSF and 3 were treated primarily within 48 hours of injury. In 22 cases (39%), fractures were acutely reduced with the TSF, fixed to bone and the struts in sliding mode without further adjustment, and in 35 cases (61%), the total residual deformity correction program was undertaken. Clinical and radiological. Complete union was obtained in 52 fractures (91%) without additional surgery at an average of 29 weeks. Four nonunions and 1 delayed union occurred. Results based on Association for the Study and Application of the Method of Ilizarov criteria: 74% excellent, 16% good, 4% fair, and 7% poor for bone outcomes and 35% excellent, 47% good, and 18% fair for functional outcomes. Eighty-eight percent of patients returned to preinjury work activities. Primary and definitive fixation with the TSF is effective. Advantages include continuity of device until union, reduced risk of infection, early mobilization, restoration of primary defect caused by bone loss, easy and accurate application, convertibility and versatility compared with a monolateral fixator, and improved union rate and range of motion for lower extremity long-bone fractures in patients with multiple traumatic injuries.

Computer-aided diagnosis of mammographic masses using geometric verification-based image retrieval

NASA Astrophysics Data System (ADS)

Li, Qingliang; Shi, Weili; Yang, Huamin; Zhang, Huimao; Li, Guoxin; Chen, Tao; Mori, Kensaku; Jiang, Zhengang

2017-03-01

Computer-Aided Diagnosis of masses in mammograms is an important indicator of breast cancer. The use of retrieval systems in breast examination is increasing gradually. In this respect, the method of exploiting the vocabulary tree framework and the inverted file in the mammographic masse retrieval have been proved high accuracy and excellent scalability. However it just considered the features in each image as a visual word and had ignored the spatial configurations of features. It greatly affect the retrieval performance. To overcome this drawback, we introduce the geometric verification method to retrieval in mammographic masses. First of all, we obtain corresponding match features based on the vocabulary tree framework and the inverted file. After that, we grasps the main point of local similarity characteristic of deformations in the local regions by constructing the circle regions of corresponding pairs. Meanwhile we segment the circle to express the geometric relationship of local matches in the area and generate the spatial encoding strictly. Finally we judge whether the matched features are correct or not, based on verifying the all spatial encoding are whether satisfied the geometric consistency. Experiments show the promising results of our approach.

Higher Resolution and Faster MRI of 31Phosphorus in Bone

NASA Astrophysics Data System (ADS)

Frey, Merideth; Barrett, Sean; Sethna, Zachary; Insogna, Karl; Vanhouten, Joshua

2013-03-01

Probing the internal composition of bone on the sub-100 μm length scale is important to study normal features and to look for signs of disease. However, few useful non-destructive techniques are available to evaluate changes in the bone mineral chemical structure and functional micro-architecture on the interior of bones. MRI would be an excellent candidate, but bone is a particularly challenging tissue to study given the relatively low water density, wider linewidths of its solid components leading to low spatial resolution, and the long imaging time compared to conventional 1H MRI. Our lab has recently made advances in obtaining high spatial resolution (sub-400 μm)3 three-dimensional 31Phosphorus MRI of bone through use of the quadratic echo line-narrowing sequence (1). In this talk, we describe our current results using proton decoupling to push this technique even further towards the factor of 1000 increase in spatial resolution imposed by fundamental limits. We also discuss our work to speed up imaging through novel, faster reconstruction algorithms that can reconstruct the desired image from very sparse data sets. (1) M. Frey, et al. PNAS 109: 5190 (2012).

Study of a high-resolution, 3D positioning cadmium zinc telluride detector for PET.

PubMed

Gu, Y; Matteson, J L; Skelton, R T; Deal, A C; Stephan, E A; Duttweiler, F; Gasaway, T M; Levin, C S

2011-03-21

This paper investigates the performance of 1 mm resolution cadmium zinc telluride (CZT) detectors for positron emission tomography (PET) capable of positioning the 3D coordinates of individual 511 keV photon interactions. The detectors comprise 40 mm × 40 mm × 5 mm monolithic CZT crystals that employ a novel cross-strip readout with interspersed steering electrodes to obtain high spatial and energy resolution. The study found a single anode FWHM energy resolution of 3.06 ± 0.39% at 511 keV throughout most of the detector volume. Improved resolution is expected with properly shielded front-end electronics. Measurements made using a collimated beam established the efficacy of the steering electrodes in facilitating enhanced charge collection across anodes, as well as a spatial resolution of 0.44 ± 0.07 mm in the direction orthogonal to the electrode planes. Finally, measurements based on coincidence electronic collimation yielded a point spread function with 0.78 ± 0.10 mm FWHM, demonstrating 1 mm spatial resolution capability transverse to the anodes-as expected from the 1 mm anode pitch. These findings indicate that the CZT-based detector concept has excellent performance and shows great promise for a high-resolution PET system.

Arc_Mat: a Matlab-based spatial data analysis toolbox

NASA Astrophysics Data System (ADS)

Liu, Xingjian; Lesage, James

2010-03-01

This article presents an overview of Arc_Mat, a Matlab-based spatial data analysis software package whose source code has been placed in the public domain. An earlier version of the Arc_Mat toolbox was developed to extract map polygon and database information from ESRI shapefiles and provide high quality mapping in the Matlab software environment. We discuss revisions to the toolbox that: utilize enhanced computing and graphing capabilities of more recent versions of Matlab, restructure the toolbox with object-oriented programming features, and provide more comprehensive functions for spatial data analysis. The Arc_Mat toolbox functionality includes basic choropleth mapping; exploratory spatial data analysis that provides exploratory views of spatial data through various graphs, for example, histogram, Moran scatterplot, three-dimensional scatterplot, density distribution plot, and parallel coordinate plots; and more formal spatial data modeling that draws on the extensive Spatial Econometrics Toolbox functions. A brief review of the design aspects of the revised Arc_Mat is described, and we provide some illustrative examples that highlight representative uses of the toolbox. Finally, we discuss programming with and customizing the Arc_Mat toolbox functionalities.

I. SPATIAL SKILLS, THEIR DEVELOPMENT, AND THEIR LINKS TO MATHEMATICS.

PubMed

Verdine, Brian N; Golinkoff, Roberta Michnick; Hirsh-Pasek, Kathy; Newcombe, Nora S

2017-03-01

Understanding the development of spatial skills is important for promoting school readiness and improving overall success in STEM (science, technology, engineering, and mathematics) fields (e.g., Wai, Lubinski, Benbow, & Steiger, 2010). Children use their spatial skills to understand the world, including visualizing how objects fit together, and can practice them via spatial assembly activities (e.g., puzzles or blocks). These skills are incorporated into measures of overall intelligence and have been linked to success in subjects like mathematics (Mix & Cheng, 2012) and science (Pallrand & Seeber, 1984; Pribyl & Bodner, 1987). This monograph sought to answer four questions about early spatial skill development: 1) Can we reliably measure spatial skills in 3- and 4-year-olds?; 2) Do spatial skills measured at 3 predict spatial skills at age 5?; 3) Do preschool spatial skills predict mathematics skills at age 5?; and 4) What factors contribute to individual differences in preschool spatial skills (e.g., SES, gender, fine-motor skills, vocabulary, and executive function)? Longitudinal data generated from a new spatial skill test for 3-year-old children, called the TOSA (Test of Spatial Assembly), show that it is a reliable and valid measure of early spatial skills that provides strong prediction to spatial skills measured with established tests at age 5. New data using this measure finds links between early spatial skill and mathematics, language, and executive function skills. Analyses suggest that preschool spatial experiences may play a central role in children's mathematical skills around the time of school entry. Executive function skills provide an additional unique contribution to predicting mathematical performance. In addition, individual differences, specifically socioeconomic status, are related to spatial and mathematical skill. We conclude by exploring ways of providing rich early spatial experiences to children. © 2017 The Society for Research in Child Development, Inc.