Real-time Recovery Efficiencies and Performance of the Palomar Transient Factory’s Transient Discovery Pipeline

NASA Astrophysics Data System (ADS)

Frohmaier, C.; Sullivan, M.; Nugent, P. E.; Goldstein, D. A.; DeRose, J.

2017-05-01

We present the transient source detection efficiencies of the Palomar Transient Factory (PTF), parameterizing the number of transients that PTF found versus the number of similar transients that occurred over the same period in the survey search area but were missed. PTF was an optical sky survey carried out with the Palomar 48 inch telescope over 2009-2012, observing more than 8000 square degrees of sky with cadences of between one and five days, locating around 50,000 non-moving transient sources, and spectroscopically confirming around 1900 supernovae. We assess the effectiveness with which PTF detected transient sources, by inserting ≃ 7 million artificial point sources into real PTF data. We then study the efficiency with which the PTF real-time pipeline recovered these sources as a function of the source magnitude, host galaxy surface brightness, and various observing conditions (using proxies for seeing, sky brightness, and transparency). The product of this study is a multi-dimensional recovery efficiency grid appropriate for the range of observing conditions that PTF experienced and that can then be used for studies of the rates, environments, and luminosity functions of different transient types using detailed Monte Carlo simulations. We illustrate the technique using the observationally well-understood class of type Ia supernovae.

Color Me Intrigued: the Discovery of iPTF 16fnm, a Supernova 2002cx-like Object

DOE PAGES

Miller, A. A.; Kasliwal, M. M.; Cao, Y.; ...

2017-10-12

Modern wide-field, optical time-domain surveys must solve a basic optimization problem: maximize the number of transient discoveries or minimize the follow-up needed for the new discoveries. Here, we describe the Color Me Intrigued experiment, the first from the intermediate Palomar Transient Factory (iPTF) to search for transients simultaneously in themore » $$g_\\mathrm{PTF}$$- and $$R_\\mathrm{PTF}$$-bands. During the course of this experiment we discovered iPTF$$\\,$$16fnm, a new member of the 02cx-like subclass of type Ia supernovae (SNe). iPTF$$\\,$$16fnm peaked at $$M_{g_\\mathrm{PTF}} = -15.09 \\pm 0.17 \\; \\mathrm{mag}$$, making it the second least-luminous known type Ia SN. iPTF 16fnm exhibits all the hallmarks of the 02cx-like class: (i) low luminosity at peak, (ii) low ejecta velocities, and (iii) a non-nebular spectra several months after peak. Spectroscopically, iPTF$$\\,$$16fnm exhibits a striking resemblence to 2 other low-luminosity 02cx-like SNe: SNe 2007qd and 2010ae. iPTF$$\\,$$16fnm and SN 2005hk decline at nearly the same rate, despite a 3 mag difference in brightness at peak. When considering the full subclass of 02cx-like SNe, we do not find evidence for a tight correlation between peak luminosity and decline rate in either the $g'$ or $r'$ band. We further examine the $g' - r'$ evolution of 02cx-like SNe and find that their unique color evolution can be used to separate them from 91bg-like and normal type Ia SNe. This selection function will be especially important in the spectroscopically incomplete Zwicky Transient Facility/Large Synoptic Survey Telescope era. We measure the relative rate of 02cx-like SNe to normal SNe Ia and find $$r_{N_{02cx}/N_{Ia}} = 25^{+75}_{-18.5}\\%$$. Finally, we close by recommending that LSST periodically evaluate, and possibly update, its observing cadence to maximize transient science.« less

Color Me Intrigued: the Discovery of iPTF 16fnm, a Supernova 2002cx-like Object

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, A. A.; Kasliwal, M. M.; Cao, Y.

Modern wide-field, optical time-domain surveys must solve a basic optimization problem: maximize the number of transient discoveries or minimize the follow-up needed for the new discoveries. Here, we describe the Color Me Intrigued experiment, the first from the intermediate Palomar Transient Factory (iPTF) to search for transients simultaneously in themore » $$g_\\mathrm{PTF}$$- and $$R_\\mathrm{PTF}$$-bands. During the course of this experiment we discovered iPTF$$\\,$$16fnm, a new member of the 02cx-like subclass of type Ia supernovae (SNe). iPTF$$\\,$$16fnm peaked at $$M_{g_\\mathrm{PTF}} = -15.09 \\pm 0.17 \\; \\mathrm{mag}$$, making it the second least-luminous known type Ia SN. iPTF 16fnm exhibits all the hallmarks of the 02cx-like class: (i) low luminosity at peak, (ii) low ejecta velocities, and (iii) a non-nebular spectra several months after peak. Spectroscopically, iPTF$$\\,$$16fnm exhibits a striking resemblence to 2 other low-luminosity 02cx-like SNe: SNe 2007qd and 2010ae. iPTF$$\\,$$16fnm and SN 2005hk decline at nearly the same rate, despite a 3 mag difference in brightness at peak. When considering the full subclass of 02cx-like SNe, we do not find evidence for a tight correlation between peak luminosity and decline rate in either the $g'$ or $r'$ band. We further examine the $g' - r'$ evolution of 02cx-like SNe and find that their unique color evolution can be used to separate them from 91bg-like and normal type Ia SNe. This selection function will be especially important in the spectroscopically incomplete Zwicky Transient Facility/Large Synoptic Survey Telescope era. We measure the relative rate of 02cx-like SNe to normal SNe Ia and find $$r_{N_{02cx}/N_{Ia}} = 25^{+75}_{-18.5}\\%$$. Finally, we close by recommending that LSST periodically evaluate, and possibly update, its observing cadence to maximize transient science.« less

Early Observations of the Type Ia Supernova iPTF 16abc

NASA Astrophysics Data System (ADS)

Miller, Adam; iPTF Collaboration

2018-01-01

Early observations of Type Ia supernovae (SNe) provide a unique probe of their progenitor systems and explosion physics. Here, we report the intermediate Palomar Transient Factory (iPTF) discovery of an extraordinarily young SN Ia, iPTF 16abc. By fitting a power law to our early light curve, we infer that first light for the SN only occurred 0.15 +0.15-0.07 d before our first detection. In the ~24 hr after discovery, iPTF 16abc rose by ~2 mag, following a near-linear rise in flux for ~3 d. Strong C II absorption is detected in the early spectra of iPTF 16abc, before disappearing after ~7 d. Unlike the extensively-observed Type Ia SN 2011fe, the (B-V)_0 colors of iPTF 16abc are blue and nearly constant in the days after explosion. We show that our early observations of iPTF 16abc cannot be explained by either SN shock breakout and the associated, subsequent cooling, or the SN ejecta colliding with a stellar companion. Instead, we argue that the early characteristics of iPTF 16abc, including: (i) the rapid, near-linear rise, (ii) the non-evolving blue colors, and (iii) the strong absorption from ionized carbon, are the result of either vigorous mixing of radioactive-Ni in the SN ejecta, or ejecta interaction with diffuse material, or a combination of the two. In the next few years, dozens of very young normal SNe Ia will be discovered, and observations similar to those presented here will constrain the white dwarf explosion mechanism.

SN2002es-like supernovae from different viewing angles

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cao, Yi; Kulkarni, S. R.; Gal-Yam, Avishay

2016-11-18

In this letter, we compare optical light curves of two SN2002es-like Type Ia supernovae (SNe), iPTF14atg and iPTF14dpk, from the intermediate Palomar Transient Factory. Although the two light curves resemble each other around and after maximum, they show distinct early-phase rise behavior in the r-band. On the one hand, iPTF14atg revealed a slow and steady rise that lasted for 22 days with a mean rise rate of 0.2-0.3 mag day -1 , before it reached the R-band peak (-18.05 mag). On the other hand, iPTF14dpk rose rapidly to -17 mag within a day of discovery with a rise rate ,more » and then rose slowly to its peak (-18.19 mag) with a rise rate similar to iPTF14atg. The apparent total rise time of iPTF14dpk is therefore only 16 days. We show that emission from iPTF14atg before -17 days with respect to its maximum can be entirely attributed to radiation produced by collision between the SN and its companion star. Such emission is absent from iPTF14dpk probably because of an unfavored viewing angle, provided that SN2002es-like events arise from the same progenitor channel. We further show that an SN2002es-like SN may experience a dark phase after the explosion but before its radioactively powered light curve becomes visible. This dark phase may be lit by radiation from supernova-companion interaction.« less

Tidal Disruption Events: From iPTF to ZTF

NASA Astrophysics Data System (ADS)

Hung, Tiara; Gezari, Suvi; Cenko, Bradley; Kulkarni, Shri; Blagorodnova, Nadia; Yan, Lin

2018-01-01

The biggest challenge to finding tidal disruption events (TDEs) in optical transient sky surveys is to get rid of the numerous interlopers such as AGN and Type Ia supernovae that are at least 100 times more common. We will describe our selection process that led to the prompt discoveries of two TDEs (iPTF16axa and iPTF16fnl) in a 4-month long experiment to study nuclear transients in the intermediate Palomar Transient Factory (iPTF) together with UV and X-ray imaging follow-up from our Swift Cycle 12 Key Project. Subsequent multi-wavelength follow-up observations were triggered in order to study these rare events. We found that most of the optically-bright TDEs share similar peak luminosities, light curves, and temperature evolution except iPTF16fnl, which is the nearest, faintest, and fastest optical TDE ever found. Based on our detection rate in iPTF, we expect to discover ~30 TDEs in the first year of the Zwicky Transient Factory (ZTF), doubling the current TDE sample aggregated over ~7 years of wide-field optical surveys.

The acinar differentiation determinant PTF1A inhibits initiation of pancreatic ductal adenocarcinoma

PubMed Central

Krah, Nathan M; De La O, Jean-Paul; Swift, Galvin H; Hoang, Chinh Q; Willet, Spencer G; Chen Pan, Fong; Cash, Gabriela M; Bronner, Mary P; Wright, Christopher VE; MacDonald, Raymond J; Murtaugh, L Charles

2015-01-01

Understanding the initiation and progression of pancreatic ductal adenocarcinoma (PDAC) may provide therapeutic strategies for this deadly disease. Recently, we and others made the surprising finding that PDAC and its preinvasive precursors, pancreatic intraepithelial neoplasia (PanIN), arise via reprogramming of mature acinar cells. We therefore hypothesized that the master regulator of acinar differentiation, PTF1A, could play a central role in suppressing PDAC initiation. In this study, we demonstrate that PTF1A expression is lost in both mouse and human PanINs, and that this downregulation is functionally imperative in mice for acinar reprogramming by oncogenic KRAS. Loss of Ptf1a alone is sufficient to induce acinar-to-ductal metaplasia, potentiate inflammation, and induce a KRAS-permissive, PDAC-like gene expression profile. As a result, Ptf1a-deficient acinar cells are dramatically sensitized to KRAS transformation, and reduced Ptf1a greatly accelerates development of invasive PDAC. Together, these data indicate that cell differentiation regulators constitute a new tumor suppressive mechanism in the pancreas. DOI: http://dx.doi.org/10.7554/eLife.07125.001 PMID:26151762

Informing soil models using pedotransfer functions: challenges and perspectives

NASA Astrophysics Data System (ADS)

Pachepsky, Yakov; Romano, Nunzio

2015-04-01

Pedotransfer functions (PTFs) are empirical relationships between parameters of soil models and more easily obtainable data on soil properties. PTFs have become an indispensable tool in modeling soil processes. As alternative methods to direct measurements, they bridge the data we have and data we need by using soil survey and monitoring data to enable modeling for real-world applications. Pedotransfer is extensively used in soil models addressing the most pressing environmental issues. The following is an attempt to provoke a discussion by listing current issues that are faced by PTF development. 1. As more intricate biogeochemical processes are being modeled, development of PTFs for parameters of those processes becomes essential. 2. Since the equations to express PTF relationships are essentially unknown, there has been a trend to employ highly nonlinear equations, e.g. neural networks, which in theory are flexible enough to simulate any dependence. This, however, comes with the penalty of large number of coefficients that are difficult to estimate reliably. A preliminary classification applied to PTF inputs and PTF development for each of the resulting groups may provide simple, transparent, and more reliable pedotransfer equations. 3. The multiplicity of models, i.e. presence of several models producing the same output variables, is commonly found in soil modeling, and is a typical feature in the PTF research field. However, PTF intercomparisons are lagging behind PTF development. This is aggravated by the fact that coefficients of PTF based on machine-learning methods are usually not reported. 4. The existence of PTFs is the result of some soil processes. Using models of those processes to generate PTFs, and more general, developing physics-based PTFs remains to be explored. 5. Estimating the variability of soil model parameters becomes increasingly important, as the newer modeling technologies such as data assimilation, ensemble modeling, and model abstraction, become progressively more popular. The variability PTFs rely on the spatio-temporal dynamics of soil variables, and that opens new sources of PTF inputs stemming from technology advances such as monitoring networks, remote and proximal sensing, and omics. 6. Burgeoning PTF development has not so far affected several persisting regional knowledge gaps. Remarkably little effort was put so far into PTF development for saline soils, calcareous and gypsiferous soils, peat soils, paddy soils, soils with well expressed shrink-swell behavior, and soils affected by freeze-thaw cycles. 7. Soils from tropical regions are quite often considered as a pseudo-entity for which a single PTF can be applied. This assumption will not be needed as more regional data will be accumulated and analyzed. 8. Other advances in regional PTFs will be possible due to presence of large databases on region-specific useful PTF inputs such as moisture equivalent, laser diffractometry data, or soil specific surface. 9. Most of flux models in soils, be it water, solutes, gas, or heat, involve parameters that are scale-dependent. Including scale dependencies in PTFs will be critical to improve PTF usability. 10. Another scale-related matter is pedotransfer for coarse-scale soil modeling, for example, in weather or climate models. Soil hydraulic parameters in these models cannot be measured and the efficiency of the pedotransfer can be evaluated only in terms of its utility. There is a pressing need to determine combinations of pedotransfer and upscaling procedures that can lead to the derivation of suitable coarse-scale soil model parameters. 11. The spatial coarse scale often assumes a coarse temporal support, and that may lead to including in PTFs other environmental variables such as topographic, weather, and management attributes. 12. Some PTF inputs are time- or space-dependent, and yet little is known whether the spatial or temporal structure of PTF outputs is properly predicted from such inputs 13. Further exploration is needed to use PTF as a source of hypotheses on and insights into relationships between soil processes and soil composition as well as between soil structure and soil functioning. PTFs are empirical relationships and their accuracy outside the database used for the PTF development is essentially unknown. Therefore they should never be considered as an ultimate source of parameters in soil modeling. Rather they strive to provide a balance between accuracy and availability. The primary role of PTF is to assist in modeling for screening and comparative purposes, establishing ranges and/or probability distributions of model parameters, and creating realistic synthetic soil datasets and scenarios. Developing and improving PTFs will remain the mainstream way of packaging data and knowledge for applications of soil modeling.

iPTF17cw: An Engine-driven Supernova Candidate Discovered Independent of a Gamma-Ray Trigger

NASA Astrophysics Data System (ADS)

Corsi, A.; Cenko, S. B.; Kasliwal, M. M.; Quimby, R.; Kulkarni, S. R.; Frail, D. A.; Goldstein, A. M.; Blagorodnova, N.; Connaughton, V.; Perley, D. A.; Singer, L. P.; Copperwheat, C. M.; Fremling, C.; Kupfer, T.; Piascik, A. S.; Steele, I. A.; Taddia, F.; Vedantham, H.; Kutyrev, A.; Palliyaguru, N. T.; Roberts, O.; Sollerman, J.; Troja, E.; Veilleux, S.

2017-09-01

We present the discovery, classification, and radio-to-X-ray follow-up observations of iPTF17cw, a broad-lined (BL) type Ic supernova (SN) discovered by the intermediate Palomar Transient Factory (iPTF). Although it is unrelated to the gravitational wave trigger, this SN was discovered as a happy by-product of the extensive observational campaign dedicated to the follow-up of Advanced LIGO event GW 170104. The spectroscopic properties and inferred peak bolometric luminosity of iPTF17cw are most similar to the gamma-ray-burst (GRB)-associated SN, SN 1998bw, while the shape of the r-band light curve is most similar to that of the relativistic SN, SN 2009bb. Karl G. Jansky Very Large Array (VLA) observations of the iPTF17cw field reveal a radio counterpart ≈10 times less luminous than SN 1998bw, and with a peak radio luminosity comparable to that of SN 2006aj/GRB 060218 and SN 2010bh/GRB 100316D. Our radio observations of iPTF17cw imply a relativistically expanding outflow. However, further late-time observations with the VLA in its most extended configuration are needed to confirm fading of the iPTF17cw radio counterpart at all frequencies. X-ray observations carried out with Chandra reveal the presence of an X-ray counterpart with a luminosity similar to that of SN 2010bh/GRB 100316D. Searching the Fermi catalog for possible γ-rays reveals that GRB 161228B is spatially and temporally compatible with iPTF17cw. The similarity to SN 1998bw and SN 2009bb, the radio and X-ray detections, and the potential association with GRB 161228B all point to iPTF17cw being a new candidate member of the rare sample of optically discovered engine-driven BL-Ic SNe associated with relativistic ejecta.

iPTF17cw: An Engine-driven Supernova Candidate Discovered Independent of a Gamma-Ray Trigger

DOE Office of Scientific and Technical Information (OSTI.GOV)

Corsi, A.; Palliyaguru, N. T.; Cenko, S. B.

We present the discovery, classification, and radio-to-X-ray follow-up observations of iPTF17cw, a broad-lined (BL) type Ic supernova (SN) discovered by the intermediate Palomar Transient Factory (iPTF). Although it is unrelated to the gravitational wave trigger, this SN was discovered as a happy by-product of the extensive observational campaign dedicated to the follow-up of Advanced LIGO event GW 170104. The spectroscopic properties and inferred peak bolometric luminosity of iPTF17cw are most similar to the gamma-ray-burst (GRB)-associated SN, SN 1998bw, while the shape of the r -band light curve is most similar to that of the relativistic SN, SN 2009bb. Karl G.more » Jansky Very Large Array (VLA) observations of the iPTF17cw field reveal a radio counterpart ≈10 times less luminous than SN 1998bw, and with a peak radio luminosity comparable to that of SN 2006aj/GRB 060218 and SN 2010bh/GRB 100316D. Our radio observations of iPTF17cw imply a relativistically expanding outflow. However, further late-time observations with the VLA in its most extended configuration are needed to confirm fading of the iPTF17cw radio counterpart at all frequencies. X-ray observations carried out with Chandra reveal the presence of an X-ray counterpart with a luminosity similar to that of SN 2010bh/GRB 100316D. Searching the Fermi catalog for possible γ -rays reveals that GRB 161228B is spatially and temporally compatible with iPTF17cw. The similarity to SN 1998bw and SN 2009bb, the radio and X-ray detections, and the potential association with GRB 161228B all point to iPTF17cw being a new candidate member of the rare sample of optically discovered engine-driven BL-Ic SNe associated with relativistic ejecta.« less

Real-time Recovery Efficiencies and Performance of the Palomar Transient Factory's Transient Discovery Pipeline

DOE Office of Scientific and Technical Information (OSTI.GOV)

Frohmaier, C.; Sullivan, M.; Nugent, P. E.

In this paper, we present the transient source detection efficiencies of the Palomar Transient Factory (PTF), parameterizing the number of transients that PTF found versus the number of similar transients that occurred over the same period in the survey search area but were missed. PTF was an optical sky survey carried out with the Palomar 48 inch telescope over 2009–2012, observing more than 8000 square degrees of sky with cadences of between one and five days, locating around 50,000 non-moving transient sources, and spectroscopically confirming around 1900 supernovae. We assess the effectiveness with which PTF detected transient sources, by insertingmore » $$\\simeq 7$$ million artificial point sources into real PTF data. We then study the efficiency with which the PTF real-time pipeline recovered these sources as a function of the source magnitude, host galaxy surface brightness, and various observing conditions (using proxies for seeing, sky brightness, and transparency). The product of this study is a multi-dimensional recovery efficiency grid appropriate for the range of observing conditions that PTF experienced and that can then be used for studies of the rates, environments, and luminosity functions of different transient types using detailed Monte Carlo simulations. Finally, we illustrate the technique using the observationally well-understood class of type Ia supernovae.« less

Real-time Recovery Efficiencies and Performance of the Palomar Transient Factory's Transient Discovery Pipeline

DOE PAGES

Frohmaier, C.; Sullivan, M.; Nugent, P. E.; ...

2017-05-09

In this paper, we present the transient source detection efficiencies of the Palomar Transient Factory (PTF), parameterizing the number of transients that PTF found versus the number of similar transients that occurred over the same period in the survey search area but were missed. PTF was an optical sky survey carried out with the Palomar 48 inch telescope over 2009–2012, observing more than 8000 square degrees of sky with cadences of between one and five days, locating around 50,000 non-moving transient sources, and spectroscopically confirming around 1900 supernovae. We assess the effectiveness with which PTF detected transient sources, by insertingmore » $$\\simeq 7$$ million artificial point sources into real PTF data. We then study the efficiency with which the PTF real-time pipeline recovered these sources as a function of the source magnitude, host galaxy surface brightness, and various observing conditions (using proxies for seeing, sky brightness, and transparency). The product of this study is a multi-dimensional recovery efficiency grid appropriate for the range of observing conditions that PTF experienced and that can then be used for studies of the rates, environments, and luminosity functions of different transient types using detailed Monte Carlo simulations. Finally, we illustrate the technique using the observationally well-understood class of type Ia supernovae.« less

VizieR Online Data Catalog: Panchromatic observations of PTF11qcj (Corsi+, 2014)

NASA Astrophysics Data System (ADS)

Corsi, A.; Ofek, E. O.; Gal-Yam, A.; Frail, D. A.; Kulkarni, S. R.; Fox, D. B.; Kasliwal, M. M.; Sullivan, M.; Horesh, A.; Carpenter, J.; Maguire, K.; Arcavi, I.; Cenko, S. B.; Cao, Y.; Mooley, K.; Pan, Y.-C.; Sesar, B.; Sternberg, A.; Xu, D.; Bersier, D.; James, P.; Bloom, J. S.; Nugent, P. E.

2016-02-01

On 2011 November 1, we discovered PTF11qcj in an R-band image from the 48 inch Samuel Oschin telescope at Palomar Observatory (P48), which is routinely used by the Palomar Transient Factory (PTF). Subsequent observations with the P48 were conducted with the Mould-R and Gunn-g filters. Photometry (Table2) was performed relative to the SDSS r-band and g-band magnitudes of stars in the field. Multi-color optical (gri) optical light curves were also obtained using the Palomar 60 inch telescope (P60) and the RATCAM optical imager on the robotic 2m Liverpool Telescope (LT) located at the Roque de Los Muchachos Observatory on La Palma. On 2011 November 15, we started a long-term monitoring campaign of PTF11qcj (along with calibrators J1327+4326 and 3C 286) with the Karl G. Jansky Very Large Array (VLA; http://public.nrao.edu/telescopes/vla) in its D, DnC, C, CnB, and A configurations, under our Target of Opportunity programs (VLA/11A-227, VLA/11B-034, VLA/11B-247, VLA/12B-195; PI: A. Corsi). The light curves of PTF11qcj at frequencies of 2.5GHz, 3.5GHz, 5GHz, 7.4GHz, 13.5GHz, 16GHz are reported in Table3. We also observed the field of PTF11qcj (together with the test calibrator J1203+480) using the Combined Array for Research in Millimeter-wave Astronomy (CARMA; http://www.mmarray.org/), at a frequency of 93GHz. The data collected on 2011 November 19 and 2011 November 26 (CARMA program no. c0857; PI: A. Horesh) both resulted in a detection of PTF11qcj (Table3). We have carried out an X-ray monitoring campaign of PTF11qcj with Chandra and Swift. All our Swift-XRT observations yielded non detections (see Table 4), while Chandra detected PTF11qcj in three epochs (DDT proposals nos. 501793, 501794, 501797; PI: A. Corsi). The results of our X-ray follow-up are reported in Table4. We observed the position of PTF11qcj with Spitzer on two epochs (on 2012 March 28.747 and 2012 June 25.643; Table5; DDT proposal no. 31731; PI: A. Corsi). On 2012 March 28 (Table5), we also observed the field of PTF11qcj in Ks-band with the Palomar 200 inch telescope (P200). (4 data files).

Towards a Deeper Understanding of Community College Part-Time Faculty: Perceptions of Roles and Expectations

ERIC Educational Resources Information Center

Washington, Kemah Eugene Paul

2011-01-01

The employment of part-time faculty (PTF) continues to ensue debate among educators, policymakers, and state officials. Recent debate has focused on the impact of employment of PTF on student outcomes, but misses a critical element--the experiences of part-time faculty. This study explores community college PTF members' perceptions of their roles…

iPTF14yb: The First Discovery of a Gamma-Ray Burst Afterglow Independent of a High-Energy Trigger

NASA Technical Reports Server (NTRS)

Cenko, S. Bradley; Urban, Alex L.; Perley, Daniel A.; Horesh, Assaf; Corsi, Alessandra; Fox, Derek B.; Cao, Yi; Kasliwal, Mansi M.; Lien, Amy; Arcavi, Iair;

Source fields reconstruction with 3D mapping by means of the virtual acoustic volume concept

NASA Astrophysics Data System (ADS)

Forget, S.; Totaro, N.; Guyader, J. L.; Schaeffer, M.

2016-10-01

This paper presents the theoretical framework of the virtual acoustic volume concept and two related inverse Patch Transfer Functions (iPTF) identification methods (called u-iPTF and m-iPTF depending on the chosen boundary conditions for the virtual volume). They are based on the application of Green's identity on an arbitrary closed virtual volume defined around the source. The reconstruction of sound source fields combines discrete acoustic measurements performed at accessible positions around the source with the modal behavior of the chosen virtual acoustic volume. The mode shapes of the virtual volume can be computed by a Finite Element solver to handle the geometrical complexity of the source. As a result, it is possible to identify all the acoustic source fields at the real surface of an irregularly shaped structure and irrespective of its acoustic environment. The m-iPTF method is introduced for the first time in this paper. Conversely to the already published u-iPTF method, the m-iPTF method needs only acoustic pressure and avoids particle velocity measurements. This paper is focused on its validation, both with numerical computations and by experiments on a baffled oil pan.

iPTF14yb: The First Discovery of a Gamma-Ray Burst Afterglow Independent of a High-energy Trigger

NASA Astrophysics Data System (ADS)

Cenko, S. Bradley; Urban, Alex L.; Perley, Daniel A.; Horesh, Assaf; Corsi, Alessandra; Fox, Derek B.; Cao, Yi; Kasliwal, Mansi M.; Lien, Amy; Arcavi, Iair; Bloom, Joshua S.; Butler, Nat R.; Cucchiara, Antonino; de Diego, José A.; Filippenko, Alexei V.; Gal-Yam, Avishay; Gehrels, Neil; Georgiev, Leonid; Jesús González, J.; Graham, John F.; Greiner, Jochen; Kann, D. Alexander; Klein, Christopher R.; Knust, Fabian; Kulkarni, S. R.; Kutyrev, Alexander; Laher, Russ; Lee, William H.; Nugent, Peter E.; Prochaska, J. Xavier; Ramirez-Ruiz, Enrico; Richer, Michael G.; Rubin, Adam; Urata, Yuji; Varela, Karla; Watson, Alan M.; Wozniak, Przemek R.

2015-04-01

We report here the discovery by the Intermediate Palomar Transient Factory (iPTF) of iPTF14yb, a luminous ({{M}r}≈ -27.8 mag), cosmological (redshift 1.9733), rapidly fading optical transient. We demonstrate, based on probabilistic arguments and a comparison with the broader population, that iPTF14yb is the optical afterglow of the long-duration gamma-ray burst GRB 140226A. This marks the first unambiguous discovery of a GRB afterglow prior to (and thus entirely independent of) an associated high-energy trigger. We estimate the rate of iPTF14yb-like sources (i.e., cosmologically distant relativistic explosions) based on iPTF observations, inferring an all-sky value of {{\\Re }rel}=610 yr-1 (68% confidence interval of 110-2000 yr-1). Our derived rate is consistent (within the large uncertainty) with the all-sky rate of on-axis GRBs derived by the Swift satellite. Finally, we briefly discuss the implications of the nondetection to date of bona fide “orphan” afterglows (i.e., those lacking detectable high-energy emission) on GRB beaming and the degree of baryon loading in these relativistic jets.

Time-domain Surveys and Data Shift: Case Study at the intermediate Palomar Transient Factory

NASA Astrophysics Data System (ADS)

Rebbapragada, Umaa; Bue, Brian; Wozniak, Przemyslaw R.

2015-01-01

Next generation time-domain surveys are susceptible to the problem of data shift that is caused by upgrades to data processing pipelines and instruments. Data shift degrades the performance of automated machine learning classifiers that vet detections and classify source types because fundamental assumptions are violated when classifiers are built in one data regime but are deployed on data from another. This issue is not currently discussed within the astronomical community, but will be increasingly pressing over the next decade with the advent of new time domain surveys.We look at the problem of data shift that was caused by a data pipeline upgrade when the intermediate Palomar Transient Factory (iPTF) succeeded the Palomar Transient Factory (PTF) in January 2013. iPTF relies upon machine-learned Real-Bogus classifiers to vet sources extracted from subtracted images on a scale of zero to one where zero indicates a bogus (image artifact) and one indicates a real astronomical transient, with the overwhelming majority of candidates are scored as bogus. An effective Real-Bogus system filters all but the most promising candidates, which are presented to human scanners who make decisions about triggering follow up assets.The Real-Bogus systems currently in operation at iPTF (RB4 and RB5) solve the data shift problem. The statistical models of RB4 and RB5 were built from the ground up using examples from iPTF alone, whereas an older system, RB2, was built using PTF data, but was deployed after iPTF launched. We discuss the machine learning assumptions that are violated when a system is trained on one domain (PTF) but deployed on another (iPTF) that experiences data shift. We provide illustrative examples of data parameters and statistics that experienced shift. Finally, we show results comparing the three systems in operation, demonstrating that systems that solve domain shift (RB4 and RB5) are superior to those that don't (RB2).Research described in this abstract was carried out at the Jet Propulsion Laboratory under contract with the National Aeronautics and Space Administration. US Government Support Acknowledged.

VizieR Online Data Catalog: Palomar Transient Factory SNe IIn photometry (Ofek+, 2014)

NASA Astrophysics Data System (ADS)

Ofek, E. O.; Arcavi, I.; Tal, D.; Sullivan, M.; Gal-Yam, A.; Kulkarni, S. R.; Nugent, P. E.; Ben-Ami, S.; Bersier, D.; Cao, Y.; Cenko, S. B.; De Cia, A.; Filippenko, A. V.; Fransson, C.; Kasliwal, M. M.; Laher, R.; Surace, J.; Quimby, R.; Yaron, O.

2017-07-01

The Palomar Transient Factory (PTF; Law et al. 2009PASP..121.1395L; Rau et al. 2009PASP..121.1334R) and its extension the intermediate PTF (iPTF) found over 2200 spectroscopically confirmed SNe. We selected 19 SNe IIn for which PTF/iPTF has good coverage of the light-curve rise and peak; they are listed in Table 1. Optical spectra were obtained with a variety of telescopes and instruments, including the Double Spectrograph (Oke & Gunn 1982PASP...94..586O) at the Palomar 5 m Hale telescope, the Kast spectrograph (Miller & Stone 1993, Lick Observatory Technical Report 66 (Santa Cruz, CA: Lick Observatory)) at the Lick 3 m Shane telescope, the Low Resolution Imaging Spectrometer (Oke et al. 1995PASP..107..375O) on the Keck-1 10 m telescope, and the Deep Extragalactic Imaging Multi-Object Spectrograph (Faber et al. 2003SPIE.4841.1657F) on the Keck-2 10 m telescope. (2 data files).

EVLA Observations of PTF10vdl

NASA Astrophysics Data System (ADS)

Kasliwal, Mansi; Kulkarni, Shri; Arcavi, Iair; Gal-Yam, Avishay; Quimby, Robert; Ofek, Eran; Frail, Dale; Yuan, Fang; Akerlof, Carl; McKay, Time

2010-09-01

We triggered our NRAO Target Of Opportunity program "Exploring Transients in the Local Universe" and used the Expanded Very Large Array (EVLA) to observe the field of view toward PTF10vdl (ATEL#2862 an ATEL#2863), discovered by the Palomar Transient Factory . The EVLA observations were made on September 18.26 UT at a center frequency of 8.46 GHz.

CARMA Observations of PTF10vdl

NASA Astrophysics Data System (ADS)

Carpenter, John M.

2010-09-01

We used the Combined Array for Research in Millimeter-wave Astronomy (CARMA) to observe the field of view toward PTF10vdl (ATEL#2862), discovered by the Palomar Transient Factory . The observations began at September 18, 2010 04:18 UT and continued for 4.9 hours. The mean frequency of the observations was 97.5 GHz with a total bandwidth of 8 GHz.

VizieR Online Data Catalog: Positions and distances of RR Lyrae stars (Sesar+, 2014)

NASA Astrophysics Data System (ADS)

Sesar, B.; Banholzer, S. R.; Cohen, J. G.; Martin, N. F.; Grillmair, C. J.; Levitan, D.; Laher, R. R.; Ofek, E. O.; Surace, J. A.; Kulkarni, S. R.; Prince, T. A.; Rix, H.-W.

2017-04-01

RRab stars used in this work were selected by an automated classification algorithm that uses imaging data provided by the Palomar Transient Factory survey (PTF). The PTF (Law et al. 2009PASP..121.1395L; Rau et al. 2009PASP..121.1334R) is a synoptic survey designed to explore the transient sky. The project utilizes the 48-inch Samuel Oschin Schmidt Telescope on Mount Palomar. Each PTF image covers 7.26 deg2 with a pixel scale of 1.01''. The typical PTF cadence consists of two 60 s exposures separated by ~1 hr and repeated every one to five days. By 2013 June, PTF observed ~11000 deg2 of sky at least 25 times in the Mould-R filter (hereafter the R-band filter), and about 2200 deg2 in the SDSS g' filter. PTF photometry is calibrated to an accuracy of about 0.02 mag (Ofek et al. 2012PASP..124...62O, 2012PASP..124..854O) and light curves have relative precision of better than 10 mmag at the bright end, and about 0.2 mag at the survey limiting magnitude of R=20.6 mag. The relative photometry algorithm is described in Ofek et al. (2011, J/ApJ/740/65, see their Appendix A). (1 data file).

Ptf1a determines horizontal and amacrine cell fates during mouse retinal development.

PubMed

Fujitani, Yoshio; Fujitani, Shuko; Luo, Huijun; Qiu, Feng; Burlison, Jared; Long, Qiaoming; Kawaguchi, Yoshiya; Edlund, Helena; MacDonald, Raymond J; Furukawa, Takahisa; Fujikado, Takashi; Magnuson, Mark A; Xiang, Mengqing; Wright, Christopher V E

2006-11-01

The vertebrate neural retina comprises six classes of neurons and one class of glial cells, all derived from a population of multipotent progenitors. There is little information on the molecular mechanisms governing the specification of cell type identity from multipotent progenitors in the developing retina. We report that Ptf1a, a basic-helix-loop-helix (bHLH) transcription factor, is transiently expressed by post-mitotic precursors in the developing mouse retina. Recombination-based lineage tracing analysis in vivo revealed that Ptf1a expression marks retinal precursors with competence to exclusively produce horizontal and amacrine neurons. Inactivation of Ptf1a leads to a fate-switch in these precursors that causes them to adopt a ganglion cell fate. This mis-specification of neurons results in a complete loss of horizontal cells, a profound decrease of amacrine cells and an increase in ganglion cells. Furthermore, we identify Ptf1a as a primary downstream target for Foxn4, a forkhead transcription factor involved in the genesis of horizontal and amacrine neurons. These data, together with the previous findings on Foxn4, provide a model in which the Foxn4-Ptf1a pathway plays a central role in directing the differentiation of retinal progenitors towards horizontal and amacrine cell fates.

The peculiar Type Ia supernova iPTF14atg: Chandrasekhar-mass explosion or violent merger?

NASA Astrophysics Data System (ADS)

Kromer, M.; Fremling, C.; Pakmor, R.; Taubenberger, S.; Amanullah, R.; Cenko, S. B.; Fransson, C.; Goobar, A.; Leloudas, G.; Taddia, F.; Röpke, F. K.; Seitenzahl, I. R.; Sim, S. A.; Sollerman, J.

2016-07-01

iPTF14atg, a subluminous peculiar Type Ia supernova (SN Ia) similar to SN 2002es, is the first SN Ia for which a strong UV flash was observed in the early-time light curves. This has been interpreted as evidence for a single-degenerate (SD) progenitor system, where such a signal is expected from interactions between the SN ejecta and the non-degenerate companion star. Here, we compare synthetic observables of multidimensional state-of-the-art explosion models for different progenitor scenarios to the light curves and spectra of iPTF14atg. From our models, we have difficulties explaining the spectral evolution of iPTF14atg within the SD progenitor channel. In contrast, we find that a violent merger of two carbon-oxygen white dwarfs with 0.9 and 0.76 M⊙, respectively, provides an excellent match to the spectral evolution of iPTF14atg from 10 d before to several weeks after maximum light. Our merger model does not naturally explain the initial UV flash of iPTF14atg. We discuss several possibilities like interactions of the SN ejecta with the circumstellar medium and surface radioactivity from an He-ignited merger that may be able to account for the early UV emission in violent merger models.

iPTF14yb: The First Discovery of a Gamma-Ray Burst Afterglow Independent of a High-Energy Trigger

DOE PAGES

Cenko, S. Bradley; Urban, Alex L.; Perley, Daniel A.; ...

2015-04-20

We report here the discovery by the Intermediate Palomar Transient Factory (iPTF) of iPTF14yb, a luminous (Msub>r ≈ ₋27.8 mag), cosmological (redshift 1.9733), rapidly fading optical transient. We demonstrate, based on probabilistic arguments and a comparison with the broader population, that iPTF14yb is the optical afterglow of the long-duration gamma-ray burst GRB140226A. This marks the rst unambiguous discovery of a GRB afterglow prior to (and thus entirely independent of) an associated high-energy trigger. We estimate the rate of iPTF14yb-like sources (i.e., cosmologically dis- tant relativistic explosions) based on iPTF observations, inferring an all-sky value ofmore » $$R_{rel}$$ = 610yr -1 (68% con dence interval of 110{2000 yr -1). Our derived rate is consistent (within the large uncer- tainty) with the all-sky rate of on-axis GRBs derived by the Swift satellite. Finally, we brie y discuss the implications of the nondetection to date of bona de \\orphan" afterglows (i.e., those lacking de- tectable high-energy emission) on GRB beaming and the degree of baryon loading in these relativistic jets.« less

A Characteristics Approach to the Evaluation of Economics Software Packages.

ERIC Educational Resources Information Center

Lumsden, Keith; Scott, Alex

1988-01-01

Utilizes Bloom's Taxonomy to identify elements of teacher and student interest. Depicts the way in which these interests are developed into characteristics for use in analytically evaluating software. Illustrates the use of this evaluating technique by appraising the much used software package "Running the British Economy." (KO)

Early Observations of the Type Ia Supernova iPTF 16abc: A Case of Interaction with Nearby, Unbound Material and/or Strong Ejecta Mixing

DOE PAGES

Miller, A. A.; Cao, Y.; Piro, A. L.; ...

2018-01-11

Early observations of Type Ia supernovae (SNe Ia) provide a unique probe of their progenitor systems and explosion physics. Here we report the intermediate Palomar Transient Factory (iPTF) discovery of an extraordinarily young SN Ia, iPTF 16abc. By fitting a power law to our early light curve, we infer that first light for the SN, that is when the SN could have first been detected by our survey, occurred onlymore » $$0.15\\pm_{0.07}^{0.15}$$ days before our first detection. In the $$\\sim$$24 hr after discovery, iPTF 16abc rose by $$\\sim$$2 mag, featuring a near-linear rise in flux for $$\\gtrsim$$3 days. Early spectra show strong C II absorption, which disappears after $$\\sim$$7 days. Unlike the extensivelyobserved SN Ia SN 2011fe, the $$(B-V)_0$$ colors of iPTF 16abc are blue and nearly constant in the days after explosion. We show that our early observations of iPTF 16abc cannot be explained by either SN shock breakout and the associated, subsequent cooling or the SN ejecta colliding with a stellar companion. Instead, we argue that the early characteristics of iPTF 16abc, including (i) the rapid, near-linear rise, (ii) the nonevolving blue colors, and (iii) the strong C II absorption, are the result of either ejecta interaction with nearby, unbound material or vigorous mixing of radioactive 56Ni in the SN ejecta, or a combination of the two. Finally, in the next few years, dozens of very young normal SNe Ia will be discovered, and observations similar to those presented here will constrain the white dwarf explosion mechanism.« less

Early Observations of the Type Ia Supernova iPTF 16abc: A Case of Interaction with Nearby, Unbound Material and/or Strong Ejecta Mixing

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, A. A.; Cao, Y.; Piro, A. L.

Early observations of Type Ia supernovae (SNe Ia) provide a unique probe of their progenitor systems and explosion physics. Here we report the intermediate Palomar Transient Factory (iPTF) discovery of an extraordinarily young SN Ia, iPTF 16abc. By fitting a power law to our early light curve, we infer that first light for the SN, that is when the SN could have first been detected by our survey, occurred onlymore » $$0.15\\pm_{0.07}^{0.15}$$ days before our first detection. In the $$\\sim$$24 hr after discovery, iPTF 16abc rose by $$\\sim$$2 mag, featuring a near-linear rise in flux for $$\\gtrsim$$3 days. Early spectra show strong C II absorption, which disappears after $$\\sim$$7 days. Unlike the extensivelyobserved SN Ia SN 2011fe, the $$(B-V)_0$$ colors of iPTF 16abc are blue and nearly constant in the days after explosion. We show that our early observations of iPTF 16abc cannot be explained by either SN shock breakout and the associated, subsequent cooling or the SN ejecta colliding with a stellar companion. Instead, we argue that the early characteristics of iPTF 16abc, including (i) the rapid, near-linear rise, (ii) the nonevolving blue colors, and (iii) the strong C II absorption, are the result of either ejecta interaction with nearby, unbound material or vigorous mixing of radioactive 56Ni in the SN ejecta, or a combination of the two. Finally, in the next few years, dozens of very young normal SNe Ia will be discovered, and observations similar to those presented here will constrain the white dwarf explosion mechanism.« less

Early Observations of the Type Ia Supernova iPTF 16abc: A Case of Interaction with Nearby, Unbound Material and/or Strong Ejecta Mixing

NASA Astrophysics Data System (ADS)

Miller, A. A.; Cao, Y.; Piro, A. L.; Blagorodnova, N.; Bue, B. D.; Cenko, S. B.; Dhawan, S.; Ferretti, R.; Fox, O. D.; Fremling, C.; Goobar, A.; Howell, D. A.; Hosseinzadeh, G.; Kasliwal, M. M.; Laher, R. R.; Lunnan, R.; Masci, F. J.; McCully, C.; Nugent, P. E.; Sollerman, J.; Taddia, F.; Kulkarni, S. R.

2018-01-01

Early observations of Type Ia supernovae (SNe Ia) provide a unique probe of their progenitor systems and explosion physics. Here we report the intermediate Palomar Transient Factory (iPTF) discovery of an extraordinarily young SN Ia, iPTF 16abc. By fitting a power law to our early light curve, we infer that first light for the SN, that is, when the SN could have first been detected by our survey, occurred only 0.15{+/- }0.070.15 days before our first detection. In the ∼24 hr after discovery, iPTF 16abc rose by ∼2 mag, featuring a near-linear rise in flux for ≳ 3 days. Early spectra show strong C II absorption, which disappears after ∼7 days. Unlike the extensively observed Type Ia SN 2011fe, the {(B-V)}0 colors of iPTF 16abc are blue and nearly constant in the days after explosion. We show that our early observations of iPTF 16abc cannot be explained by either SN shock breakout and the associated, subsequent cooling or the SN ejecta colliding with a stellar companion. Instead, we argue that the early characteristics of iPTF 16abc, including (i) the rapid, near-linear rise, (ii) the nonevolving blue colors, and (iii) the strong C II absorption, are the result of either ejecta interaction with nearby, unbound material or vigorous mixing of radioactive 56Ni in the SN ejecta, or a combination of the two. In the next few years, dozens of very young normal SNe Ia will be discovered, and observations similar to those presented here will constrain the white dwarf explosion mechanism.

The Palomar Transient Factory and RR Lyrae: The Metallicity–Light Curve Relation Based on ab-type RR Lyrae in the Kepler Field

NASA Astrophysics Data System (ADS)

Ngeow, Chow-Choong; Yu, Po-Chieh; Bellm, Eric; Yang, Ting-Chang; Chang, Chan-Kao; Miller, Adam; Laher, Russ; Surace, Jason; Ip, Wing-Huen

2016-12-01

The wide-field synoptic sky surveys, known as the Palomar Transient Factory (PTF) and the intermediate Palomar Transient Factory (iPTF), will accumulate a large number of known and new RR Lyrae. These RR Lyrae are good tracers to study the substructure of the Galactic halo if their distance, metallicity, and galactocentric velocity can be measured. Candidates of halo RR Lyrae can be identified from their distance and metallicity before requesting spectroscopic observations for confirmation. This is because both quantities can be obtained via their photometric light curves, because the absolute V-band magnitude for RR Lyrae is correlated with metallicity, and the metallicity can be estimated using a metallicity–light curve relation. To fully utilize the PTF and iPTF light-curve data in related future work, it is necessary to derive the metallicity–light curve relation in the native PTF/iPTF R-band photometric system. In this work, we derived such a relation using the known ab-type RR Lyrae located in the Kepler field, and it is found to be {[{Fe}/{{H}}]}PTF}=-4.089{--}7.346P+1.280{φ }31 (where P is pulsational period and {φ }31 is one of the Fourier parameters describing the shape of the light curve), with a dispersion of 0.118 dex. We tested our metallicity–light curve relation with new spectroscopic observations of a few RR Lyrae in the Kepler field, as well as several data sets available in the literature. Our tests demonstrated that the derived metallicity–light curve relation could be used to estimate metallicities for the majority of the RR Lyrae, which are in agreement with the published values.

PTF 10fqs: A LUMINOUS RED NOVA IN THE SPIRAL GALAXY MESSIER 99

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kasliwal, Mansi M.; Kulkarni, Shri R.; Quimby, Robert M.

2011-04-01

The Palomar Transient Factory (PTF) is systematically charting the optical transient and variable sky. A primary science driver of PTF is building a complete inventory of transients in the local universe (distance less than 200 Mpc). Here, we report the discovery of PTF 10fqs, a transient in the luminosity 'gap' between novae and supernovae. Located on a spiral arm of Messier 99, PTF 10fqs has a peak luminosity of M{sub r} = -12.3, red color (g - r = 1.0), and is slowly evolving (decayed by 1 mag in 68 days). It has a spectrum dominated by intermediate-width H{alpha} ({approx}930more » km s{sup -1}) and narrow calcium emission lines. The explosion signature (the light curve and spectra) is overall similar to that of M85 OT2006-1, SN 2008S, and NGC 300 OT. The origin of these events is shrouded in mystery and controversy (and in some cases, in dust). PTF 10fqs shows some evidence of a broad feature (around 8600 A) that may suggest very large velocities ({approx}10,000 km s{sup -1}) in this explosion. Ongoing surveys can be expected to find a few such events per year. Sensitive spectroscopy, infrared monitoring, and statistics (e.g., disk versus bulge) will eventually make it possible for astronomers to unravel the nature of these mysterious explosions.« less

VizieR Online Data Catalog: PTF stellar rotation periods for Pleiades members (Covey+, 2016)

NASA Astrophysics Data System (ADS)

Covey, K. R.; Agueros, M. A.; Law, N. M.; Liu, J.; Ahmadi, A.; Laher, R.; Levitan, D.; Sesar, B.; Surace, J.

2018-02-01

We monitored the Pleiades using time allocated to two PTF Key Projects: the PTF/M-dwarfs survey (Law et al. 2011ASPC..448.1367L, 2012ApJ...757..133L) and the PTF Open Cluster Survey (POCS; Agueros et al. 2011ApJ...740..110A; Douglas et al. 2014, J/ApJ/795/161). PTF was a time-domain experiment using the robotic 48-inch Samuel Oschin (P48) telescope at Palomar Observatory, CA, and involved real-time data-reduction and transient-detection pipelines and a dedicated follow-up telescope. The PTF infrastructure is described in Law et al. (2009PASP..121.1395L); we focus here on the components associated with the P48, which we used to conduct our monitoring campaign. The P48 is equipped with the CFH12K mosaic camera, which was significantly modified to optimize its performance on this telescope. The camera has 11 working CCDs, which cover a 7.26 square degree field of view with 92 megapixels at 1" sampling (Rahmer et al. 2008SPIE.7014E..4YR). Under typical observing conditions (1.1" seeing), it delivers 2" full-width half-maximum images that reach a 5σ limiting R~21 mag in 60 s (Law et al. 2010SPIE.7735E..3ML). (2 data files).

VizieR Online Data Catalog: PTF obs. of a precursor to SNHunt 275 2015 May event (Ofek+, 2016)

NASA Astrophysics Data System (ADS)

Ofek, E. O.; Cenko, S. B.; Shaviv, N. J.; Duggan, G.; Strotjohann, N.-L.; Rubin, A.; Kulkarni, S. R.; Gal-Yam, A.; Sullivan, M.; Cao, Y.; Nugent, P. E.; Kasliwal, M. M.; Sollerman, J.; Fransson, C.; Filippenko, A. V.; Perley, D. A.; Yaron, O.; Laher, R.

2016-08-01

The Palomar Transient Factory (PTF and iPTF; Law et al. 2009PASP..121.1395L; Rau et al. 2009PASP..121.1334R), using the 48inch Oschin Schmidt telescope, observed the field of SNHunt 275 starting in 2009 March. On 2013 December 12, PTF detected a new source at the location of the event, and the transient was named PTF 13efv (see Figure 1). Three images obtained between 2014 January 23 and April 25 were used as a reference. The PTF R-band photometry is listed in Table1. Most of the optical spectra were obtained with the Low Resolution Imaging Spectrometer (LRIS) on the Keck I 10m telescope, although a few spectra were also taken with the DEep Imaging Multi-Object Spectrograph (DEIMOS) on the Keck II 10m telescope, the Kast spectrograph on the Shane 3m telescope at Lick Observatory, and the Gemini-North Multiobject Spectrograph (GMOS) on the 8m Gemini-N telescope. The first spectrum was obtained during the 2013 December outburst. We used the Swift/UVOT observations of SNHunt 275, since 2008, to construct the bolometric light curve of the transient. The log of Swift-XRT observations, along with the source and background X-ray counts in the individual observations, is given in Table 5. (3 data files).

Using "Big Data" in a Classroom Setting for Student-Developed Projects

NASA Astrophysics Data System (ADS)

Hayes-Gehrke, Melissa; Vogel, Stuart N.

2018-01-01

The advances in exploration of the optical transient sky anticipated with major facilities such as the Zwicky Transient Facility (ZTF) and Large Synoptic Survey Telescope (LSST) provide an opportunity to integrate large public research datasets into the undergraduate classroom. As a step in this direction, the NSF PIRE-funded GROWTH (Global Relay of Observatories Watching Transients Happen) collaboration provided funding for curriculum development using data from the precursor to ZTF, the Intermediate Palomar Transient Factory (iPTF). One of the iPTF portals, the PTF Variable Marshal, was used by 56 Astronomy majors in the fall 2016 and 2017 semesters of the required Observational Astronomy course at the University of Maryland. Student teams learned about the iPTF survey and how to use the PTF Variable Marshal and then developed their own hypotheses about variable stars to test using data they gathered from the Variable Marshal. Through this project, students gained experience in how to develop scientific questions that can be explored using large datasets and became aware of the limitations and difficulties of such projects. This work was supported in part by NSF award OISE-1545949.

Regulating the dorsal neural tube expression of Ptf1a through a distal 3' enhancer.

PubMed

Mona, Bishakha; Avila, John M; Meredith, David M; Kollipara, Rahul K; Johnson, Jane E

2016-10-01

Generating the correct balance of inhibitory and excitatory neurons in a neural network is essential for normal functioning of a nervous system. The neural network in the dorsal spinal cord functions in somatosensation where it modulates and relays sensory information from the periphery. PTF1A is a key transcriptional regulator present in a specific subset of neural progenitor cells in the dorsal spinal cord, cerebellum and retina that functions to specify an inhibitory neuronal fate while suppressing excitatory neuronal fates. Thus, the regulation of Ptf1a expression is critical for determining mechanisms controlling neuronal diversity in these regions of the nervous system. Here we identify a sequence conserved, tissue-specific enhancer located 10.8kb 3' of the Ptf1a coding region that is sufficient to direct expression to dorsal neural tube progenitors that give rise to neurons in the dorsal spinal cord in chick and mouse. DNA binding motifs for Paired homeodomain (Pd-HD) and zinc finger (ZF) transcription factors are required for enhancer activity. Mutations in these sequences implicate the Pd-HD motif for activator function and the ZF motif for repressor function. Although no repressor transcription factor was identified, both PAX6 and SOX3 can increase enhancer activity in reporter assays. Thus, Ptf1a is regulated by active and repressive inputs integrated through multiple sequence elements within a highly conserved sequence downstream of the Ptf1a gene. Copyright © 2016 Elsevier Inc. All rights reserved.

Interpreting the Strongly Lensed Supernova iPTF16geu: Time Delay Predictions, Microlensing, and Lensing Rates

DOE Office of Scientific and Technical Information (OSTI.GOV)

More, Anupreeta; Oguri, Masamune; More, Surhud

2017-02-01

We present predictions for time delays between multiple images of the gravitationally lensed supernova, iPTF16geu, which was recently discovered from the intermediate Palomar Transient Factory (iPTF). As the supernova is of Type Ia where the intrinsic luminosity is usually well known, accurately measured time delays of the multiple images could provide tight constraints on the Hubble constant. According to our lens mass models constrained by the Hubble Space Telescope F814W image, we expect the maximum relative time delay to be less than a day, which is consistent with the maximum of 100 hr reported by Goobar et al. but placesmore » a stringent upper limit. Furthermore, the fluxes of most of the supernova images depart from expected values suggesting that they are affected by microlensing. The microlensing timescales are small enough that they may pose significant problems to measure the time delays reliably. Our lensing rate calculation indicates that the occurrence of a lensed SN in iPTF is likely. However, the observed total magnification of iPTF16geu is larger than expected, given its redshift. This may be a further indication of ongoing microlensing in this system.« less

Evaluation of atrial electromechanical functions in dipper and nondipper hypertension patients using left atrial strain P-wave dispersion and P terminal force.

PubMed

Tosun, Veysel; Korucuk, Necmettin; Kılınç, Ali Yaşar; Uygun, Turgut; Altekin, Refik Emre; Güntekin, Ünal; Ermiş, Cengiz

2018-06-04

Nondippers are known to carry a high risk of cardiovascular morbidity and mortality. The aim of this study was to investigate the effects of dipper and nondipper status of hypertension on left atrial (LA) systolic and diastolic functions using two-dimensional speckle tracking echocardiography (2D-STE), P-wave dispersion (PWD), and P terminal force (PTF) in hypertensive patients. A total of 72 patients and 39 healthy individuals were included in the study. The patients were classified as nondippers if their daytime ambulatory systolic and diastolic blood pressure did not decrease by at least 10% during the night. Atrial electromechanical delay times, LA strain values were obtained by 2D-STE with automated software and compared between the groups. PWD and PTF data were calculated on the electrocardiography. Inter-atrial (dippers: 25.5 ± 3.9, nondippers: 32.2 ± 7.4, P < .001), left-atrial (dippers: 14.9 ± 3.7, nondippers: 18.2 ± 6.0, P = .016), and right atrial (dippers: 10.5 ± 2.1, nondippers: 14.2 ± 5.2, P < .001) electromechanical delay times were significantly longer in nondippers. LA strain S (dippers: 34.2 [29.7-38.7], nondippers: 27.7 [22.7-32.2], P < .001), LA strain E (dippers: 18.2 [16.6-20.1], nondippers: 14.4 [11.6-16.8], P < .001), and LA strain A (dippers: 15.8 [13.5-17.9], nondippers: 12.7 [9.9-14.5], P < .001) were significantly lower in nondippers. Nondippers also had an increased values of maximum P-wave duration (dippers: 0.117 [0.10-0.12], nondippers: 0.126 [0.12-0.14], P < .001), PWD (dippers: 0.062 [0.06-0.07], nondippers: 0.069 [0.06-0.08], P = .004), and PTF (dippers: 0.055 ± 0.02, nondippers: 0.066 ± 0.02, P = .02). Nondipping pattern in hypertensive patients had a worse cardiac remodeling, and impaired mechanical LA function compared with dipping pattern. The PWD and PTF findings support these changes. © 2018 Wiley Periodicals, Inc.

CZT drift strip detectors for high energy astrophysics

NASA Astrophysics Data System (ADS)

Kuvvetli, I.; Budtz-Jørgensen, C.; Caroli, E.; Auricchio, N.

2010-12-01

Requirements for X- and gamma ray detectors for future High Energy Astrophysics missions include high detection efficiency and good energy resolution as well as fine position sensitivity even in three dimensions. We report on experimental investigations on the CZT drift detector developed DTU Space. It is operated in the planar transverse field (PTF) mode, with the purpose of demonstrating that the good energy resolution of the CZT drift detector can be combined with the high efficiency of the PTF configuration. Furthermore, we demonstrated and characterized the 3D sensing capabilities of this detector configuration. The CZT drift strip detector (10 mm×10 mm×2.5 mm) was characterized in both standard illumination geometry, Photon Parallel Field (PPF) configuration and in PTF configuration. The detection efficiency and energy resolution are compared for both configurations . The PTF configuration provided a higher efficiency in agreement with calculations. The detector energy resolution was found to be the same (3 keV FWHM at 122 keV) in both in PPF and PTF . The depth sensing capabilities offered by drift strip detectors was investigated by illuminating the detector using a collimated photon beam of 57Co radiation in PTF configuration. The width (300μm FWHM at 122 keV) of the measured depth distributions was almost equal to the finite beam size. However, the data indicate that the best achievable depth resolution for the CZT drift detector is 90μm FWHM at 122 keV and that it is determined by the electronic noise from the setup.

Two New Calcium-rich Gap Transients in Group and Cluster Environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lunnan, R.; Kasliwal, M. M.; Cao, Y.

We present the Palomar Transient Factory discoveries and the photometric and spectroscopic observations of PTF11kmb and PTF12bho. We show that both transients have properties consistent with the class of calcium-rich gap transients, specifically lower peak luminosities and rapid evolution compared to ordinary supernovae, and a nebular spectrum dominated by [Ca ii] emission. A striking feature of both transients is their host environments: PTF12bho is an intracluster transient in the Coma Cluster, while PTF11kmb is located in a loose galaxy group, at a physical offset ~150 kpc from the most likely host galaxy. Deep Subaru imaging of PTF12bho rules out anmore » underlying host system to a limit of M R > -8.0 mag, while Hubble Space Telescope imaging of PTF11kmb reveals a marginal counterpart that, if real, could be either a background galaxy or a globular cluster. Here, we show that the offset distribution of Ca-rich gap transients is significantly more extreme than that seen for SNe Ia or even short-hard gamma-ray bursts (sGRBs). Thus, if the offsets are caused by a kick, they require higher kick velocities and/or longer merger times than sGRBs. Finally, we also show that almost all Ca-rich transients found to date are in group and cluster environments with elliptical host galaxies, indicating a very old progenitor population; the remote locations could partially be explained by these environments having the largest fraction of stars in the intragroup/intracluster light following galaxy-galaxy interactions.« less

Two New Calcium-rich Gap Transients in Group and Cluster Environments

DOE PAGES

Lunnan, R.; Kasliwal, M. M.; Cao, Y.; ...

2017-02-08

We present the Palomar Transient Factory discoveries and the photometric and spectroscopic observations of PTF11kmb and PTF12bho. We show that both transients have properties consistent with the class of calcium-rich gap transients, specifically lower peak luminosities and rapid evolution compared to ordinary supernovae, and a nebular spectrum dominated by [Ca ii] emission. A striking feature of both transients is their host environments: PTF12bho is an intracluster transient in the Coma Cluster, while PTF11kmb is located in a loose galaxy group, at a physical offset ~150 kpc from the most likely host galaxy. Deep Subaru imaging of PTF12bho rules out anmore » underlying host system to a limit of M R > -8.0 mag, while Hubble Space Telescope imaging of PTF11kmb reveals a marginal counterpart that, if real, could be either a background galaxy or a globular cluster. Here, we show that the offset distribution of Ca-rich gap transients is significantly more extreme than that seen for SNe Ia or even short-hard gamma-ray bursts (sGRBs). Thus, if the offsets are caused by a kick, they require higher kick velocities and/or longer merger times than sGRBs. Finally, we also show that almost all Ca-rich transients found to date are in group and cluster environments with elliptical host galaxies, indicating a very old progenitor population; the remote locations could partially be explained by these environments having the largest fraction of stars in the intragroup/intracluster light following galaxy-galaxy interactions.« less

Enhancement of thermal blooming effect on free space propagation of high power CW laser beam

NASA Astrophysics Data System (ADS)

Kashef, Tamer M.; Mokhtar, Ayman M.; Ghoniemy, Samy A.

2018-02-01

In this paper, we present an enhanced model to predict the effect of thermal blooming and atmospheric turbulence, on high energy laser beams free space propagation. We introduce an implementation technique for the proposed mathematical models describing the effect of thermal blooming and atmospheric turbulence including wind blowing, and how it effect high power laser beam power, far field pattern, phase change effect and beam quality . An investigated model of adaptive optics was introduced to study how to improve the wave front and phase distortion caused by thermal blooming and atmospheric turbulence, the adaptive optics model with Actuator influence spacing 3 cm the that shows observed improvement in the Strehl ratio and in wave front and phase of the beam. These models was implemented using cooperative agents relying on GLAD software package. Without taking in consideration the effect of thermal blooming It was deduced that the beam at the source takes the Gaussian shape with uniform intensity distribution, we found that the beam converge on the required distance 4 km using converging optics, comparing to the laser beam under the effect of thermal blooming the far field pattern shows characteristic secondary blip and "sugar scoop" effect which is characteristic of thermal blooming. It was found that the thermal blooming causes the beam to steer many centimeters and to diverge beyond about 1.8 km than come to a focus at 4 km where the beam assumed to be focused on the required target. We assume that this target is moving at v = (4,-4) m/sec at distance 4 km and the wind is moving at v = (-10,-10) m/sec, it was found that the effect will be strongest when wind and target movement are at the same velocity. GLAD software is used to calculate the attenuation effects of the atmosphere as well as the phase perturbations due to temperature change in the air and effects caused as the beam crosses through the air due to wind and beam steering.

iPTF Discovery of the Rapid “Turn-on” of a Luminous Quasar

DOE PAGES

Gezari, S.; Hung, T.; Cenko, S. B.; ...

2017-01-24

We present a radio-quiet quasar at z = 0.237 discovered "turning on" by the intermediate Palomar Transient Factory (iPTF). The transient, iPTF 16bco, was detected by iPTF in the nucleus of a galaxy with an archival Sloan Digital Sky Survey spectrum with weak narrow-line emission characteristic of a low-ionization nuclear emission-line region (LINER). Our follow-up spectra show the dramatic appearance of broad Balmer lines and a power-law continuum characteristic of a luminous ( L bol ≈ 10 45 erg s -1) type 1 quasar 12 yr later. Our photometric monitoring with PTF from 2009-2012 and serendipitous X-ray observations from themore » XMM-Newton Slew Survey in 2011 and 2015 constrain the change of state to have occurred less than 500 days before the iPTF detection. An enhanced broad Hα/[O iii] λ5007 line ratio in the type 1 state relative to other changing-look quasars also is suggestive of the most rapid change of state yet observed in a quasar. Here, we argue that the > 10 increase in Eddington ratio inferred from the brightening in UV and X-ray continuum flux is more likely due to an intrinsic change in the accretion rate of a preexisting accretion disk than an external mechanism such as variable obscuration, microlensing, or the tidal disruption of a star. However, further monitoring will be helpful in better constraining the mechanism driving this change of state. The rapid "turn-on" of the quasar is much shorter than the viscous infall timescale of an accretion disk and requires a disk instability that can develop around a ~ 10 8 M ⊙ black hole on timescales less than 1 yr.« less

Induced PTF1a expression in pancreatic ductal adenocarcinoma cells activates acinar gene networks, reduces tumorigenic properties, and sensitizes cells to gemcitabine treatment.

PubMed

Jakubison, Brad L; Schweickert, Patrick G; Moser, Sarah E; Yang, Yi; Gao, Hongyu; Scully, Kathleen; Itkin-Ansari, Pamela; Liu, Yunlong; Konieczny, Stephen F

2018-05-02

Pancreatic acinar cells synthesize, package, and secrete digestive enzymes into the duodenum to aid in nutrient absorption and meet metabolic demands. When exposed to cellular stresses and insults, acinar cells undergo a dedifferentiation process termed acinar-ductal metaplasia (ADM). ADM lesions with oncogenic mutations eventually give rise to pancreatic ductal adenocarcinoma (PDAC). In healthy pancreata, the basic helix-loop-helix (bHLH) factors MIST1 and PTF1a coordinate an acinar-specific transcription network that maintains the highly developed differentiation status of the cells, protecting the pancreas from undergoing a transformative process. However, when MIST1 and PTF1a gene expression is silenced, cells are more prone to progress to PDAC. In this study, we tested whether induced MIST1 or PTF1a expression in PDAC cells could (i) re-establish the transcriptional program of differentiated acinar cells and (ii) simultaneously reduce tumor cell properties. As predicted, PTF1a induced gene expression of digestive enzymes and acinar-specific transcription factors, while MIST1 induced gene expression of vesicle trafficking molecules as well as activation of unfolded protein response components, all of which are essential to handle the high protein production load that is characteristic of acinar cells. Importantly, induction of PTF1a in PDAC also influenced cancer-associated properties, leading to a decrease in cell proliferation, cancer stem cell numbers, and repression of key ATP-binding cassette efflux transporters resulting in heightened sensitivity to gemcitabine. Thus, activation of pancreatic bHLH transcription factors rescues the acinar gene program and decreases tumorigenic properties in pancreatic cancer cells, offering unique opportunities to develop novel therapeutic intervention strategies for this deadly disease. © 2018 The Authors. Published by FEBS Press and John Wiley & Sons Ltd.

The Volumetric Rate of Calcium-rich Transients in the Local Universe

NASA Astrophysics Data System (ADS)

Frohmaier, Chris; Sullivan, Mark; Maguire, Kate; Nugent, Peter

2018-05-01

We present a measurement of the volumetric rate of “calcium-rich” optical transients in the local universe, using a sample of three events from the Palomar Transient Factory (PTF). This measurement builds on a detailed study of the PTF transient detection efficiencies and uses a Monte Carlo simulation of the PTF survey. We measure the volumetric rate of calcium-rich transients to be higher than previous estimates: {1.21}-0.39+1.13 × {10}-5 events yr‑1 Mpc‑3. This is equivalent to 33%–94% of the local volumetric Type Ia supernova rate. This calcium-rich transient rate is sufficient to reproduce the observed calcium abundances in galaxy clusters, assuming an asymptotic calcium yield per calcium-rich event of ∼0.05 {M}ȯ . We also study the PTF detection efficiency of these transients as a function of position within their candidate host galaxies. We confirm as a real physical effect previous results that suggest that calcium-rich transients prefer large physical offsets from their host galaxies.

VizieR Online Data Catalog: Rotation periods of asteroids using iPTF (Chang+, 2016)

NASA Astrophysics Data System (ADS)

Chang, C.-K.; Lin, H.-W.; Ip, W.-H.; Prince, T. A.; Kulkarni, S. R.; Levitan, D.; Laher, R.; Surace, J.

2017-01-01

To explore the transient and variable sky synoptically, the PTF/iPTF employs the Palomar 48-inch Oschin Schmidt Telescope to create a field of view of ~7.26deg2 and a pixel scale of 1.01". The available filters include the Mould-R band, with which most exposures were taken, Gunn-g', and two different Hα-bands. The exposure time is fixed at 60 seconds, which can reach a median limiting magnitude of R~21mag at the 5σ level. In order to look for large super-fast rotators, we conducted five asteroid rotation-period surveys during 2014 October 29-31 and November 10-13, and 2015 January 18-19, February 20-21 and 25-26. Each survey continuously scanned six consecutive PTF fields over the ecliptic plane in the R-band, with a cadence of 10min. We ended up with a total sky coverage of ~188deg2. (3 data files).

P-wave indices in patients with pulmonary emphysema: do P-terminal force and interatrial block have confounding effects?

PubMed

Chhabra, Lovely; Chaubey, Vinod K; Kothagundla, Chandrasekhar; Bajaj, Rishi; Kaul, Sudesh; Spodick, David H

2013-01-01

Pulmonary emphysema causes several electrocardiogram changes, and one of the most common and well known is on the frontal P-wave axis. P-axis verticalization (P-axis > 60°) serves as a quasidiagnostic indicator of emphysema. The correlation of P-axis verticalization with the radiological severity of emphysema and severity of chronic obstructive lung function have been previously investigated and well described in the literature. However, the correlation of P-axis verticalization in emphysema with other P-indices like P-terminal force in V1 (Ptf), amplitude of initial positive component of P-waves in V1 (i-PV1), and interatrial block (IAB) have not been well studied. Our current study was undertaken to investigate the effects of emphysema on these P-wave indices in correlation with the verticalization of the P-vector. Unselected, routinely recorded electrocardiograms of 170 hospitalized emphysema patients were studied. Significant Ptf (s-Ptf) was considered ≥40 mm.ms and was divided into two types based on the morphology of P-waves in V1: either a totally negative (-) P wave in V1 or a biphasic (+/-) P wave in V1. s-Ptf correlated better with vertical P-vectors than nonvertical P-vectors (P = 0.03). s-Ptf also significantly correlated with IAB (P = 0.001); however, IAB and P-vector verticalization did not appear to have any significant correlation (P = 0.23). There was a very weak correlation between i-PV1 and frontal P-vector (r = 0.15; P = 0.047); however, no significant correlation was found between i-PV1 and P-amplitude in lead III (r = 0.07; P = 0.36). We conclude that increased P-tf in emphysema may be due to downward right atrial position caused by right atrial displacement, and thus the common assumption that increased P-tf implies left atrial enlargement should be made with caution in patients with emphysema. Also, the lack of strong correlation between i-PV1 and P-amplitude in lead III or vertical P-vector may suggest the predominant role of downward right atrial distortion rather than right atrial enlargement in causing vertical P-vector in emphysema.

Simulation of herbicide degradation in different soils by use of Pedo-transfer functions (PTF) and non-linear kinetics.

PubMed

von Götz, N; Richter, O

1999-03-01

The degradation behaviour of bentazone in 14 different soils was examined at constant temperature and moisture conditions. Two soils were examined at different temperatures. On the basis of these data the influence of soil properties and temperature on degradation was assessed and modelled. Pedo-transfer functions (PTF) in combination with a linear and a non-linear model were found suitable to describe the bentazone degradation in the laboratory as related to soil properties. The linear PTF can be combined with a rate related to the temperature to account for both soil property and temperature influence at the same time.

Multimodeling with Pedotransfer functions. Documentation and user Manual for PTF Calculator (CalcPTF)

USDA-ARS?s Scientific Manuscript database

Simulations of soil water flow are often carried out with parameters estimated using pedotransfer functions (PTFs), which are empirical relationships between the soil hydraulic properties and more easily obtainable basic soil properties available, for example, from soil surveys. The use of pedotrans...

iPTF 16asu: A Luminous, Rapidly Evolving, and High-velocity Supernova

DOE PAGES

Whitesides, L.; Lunnan, R.; Kasliwal, M. M.; ...

2017-12-18

Wide-field surveys are discovering a growing number of rare transients whose physical origin is not yet well understood. We present optical and UV data and analysis of intermediate Palomar Transient Factory (iPTF) 16asu, a luminous, rapidly evolving, high-velocity, stripped-envelope supernova (SN). With a rest-frame rise time of just four days and a peak absolute magnitude of M g = -20.4 mag, the light curve of iPTF 16asu is faster and more luminous than that of previous rapid transients. The spectra of iPTF 16asu show a featureless blue continuum near peak that develops into an SN Ic-BL spectrum on the decline.more » We show that while the late-time light curve could plausibly be powered by 56Ni decay, the early emission requires a different energy source. Nondetections in the X-ray and radio strongly constrain the energy coupled to relativistic ejecta to be at most comparable to the class of low-luminosity gamma-ray bursts (GRBs). We suggest that the early emission may have been powered by either a rapidly spinning-down magnetar or by shock breakout in an extended envelope of a very energetic explosion. In either scenario a central engine is required, making iPTF 16asu an intriguing transition object between superluminous SNe, SNe Ic-BL, and low-luminosity GRBs.« less

iPTF 16asu: A Luminous, Rapidly Evolving, and High-velocity Supernova

NASA Astrophysics Data System (ADS)

Whitesides, L.; Lunnan, R.; Kasliwal, M. M.; Perley, D. A.; Corsi, A.; Cenko, S. B.; Blagorodnova, N.; Cao, Y.; Cook, D. O.; Doran, G. B.; Frederiks, D. D.; Fremling, C.; Hurley, K.; Karamehmetoglu, E.; Kulkarni, S. R.; Leloudas, G.; Masci, F.; Nugent, P. E.; Ritter, A.; Rubin, A.; Savchenko, V.; Sollerman, J.; Svinkin, D. S.; Taddia, F.; Vreeswijk, P.; Wozniak, P.

2017-12-01

Wide-field surveys are discovering a growing number of rare transients whose physical origin is not yet well understood. Here we present optical and UV data and analysis of intermediate Palomar Transient Factory (iPTF) 16asu, a luminous, rapidly evolving, high-velocity, stripped-envelope supernova (SN). With a rest-frame rise time of just four days and a peak absolute magnitude of {M}{{g}}=-20.4 mag, the light curve of iPTF 16asu is faster and more luminous than that of previous rapid transients. The spectra of iPTF 16asu show a featureless blue continuum near peak that develops into an SN Ic-BL spectrum on the decline. We show that while the late-time light curve could plausibly be powered by 56Ni decay, the early emission requires a different energy source. Nondetections in the X-ray and radio strongly constrain the energy coupled to relativistic ejecta to be at most comparable to the class of low-luminosity gamma-ray bursts (GRBs). We suggest that the early emission may have been powered by either a rapidly spinning-down magnetar or by shock breakout in an extended envelope of a very energetic explosion. In either scenario a central engine is required, making iPTF 16asu an intriguing transition object between superluminous SNe, SNe Ic-BL, and low-luminosity GRBs.

PTF discovers and follows-up nearby, young, Type II supernova

NASA Astrophysics Data System (ADS)

Kasliwal, M. M.; Quimby, R. M.; Ofek, E. O.; Kulkarni, S. R.; Gal-Yam, A.; Arcavi, I.; Green, Y.; Walker, E.; Mazzali, P.; Nugent, P. E.; Poznanski, D.; Howell, D. A.; Dilday, B.; Fox, D. B.

2010-09-01

On UT 2010 Sep 15.243, the Palomar Transient Factory discovered an optical transient, PTF10vdl at RA(J2000) = 23:05:49.001 and DEC(J2000)=03:31:20.50 near NGC 7483. We obtained Target Of Opportunity spectra with Gemini-S/GMOS (PI Kasliwal) on Sep 16.29. The spectrum was extremely blue (f_nu proportional to nu^4.5) and nearly featureless. We further obtained a spectrum with the TNG/DOLORES (PI Walker) on Sep 17.40 and P-Cygni profiles of four Balmer lines were clearly visible, consistent with the redshift of NGC 7483, suggesting this is a Type II supernova.

Monitoring Cyanobacteria with Satellites Webinar

EPA Pesticide Factsheets

real-world satellite applications can quantify cyanobacterial harmful algal blooms and related water quality parameters. Provisional satellite derived cyanobacteria data and different software tools are available to state environmental and health agencies.

The Volumetric Rate of Calcium-rich Transients in the Local Universe

DOE PAGES

Frohmaier, Chris; Sullivan, Mark; Maguire, Kate; ...

2018-05-04

Here, we present a measurement of the volumetric rate of "calcium-rich" optical transients in the local universe, using a sample of three events from the Palomar Transient Factory (PTF). This measurement builds on a detailed study of the PTF transient detection efficiencies and uses a Monte Carlo simulation of the PTF survey. We measure the volumetric rate of calcium-rich transients to be higher than previous estimates: 1.21 -0.39 +1.13 10 -5 events yr -1Mpc -3. This is equivalent to 33%-94% of the local volumetric Type Ia supernova rate. This calcium-rich transient rate is sufficient to reproduce the observed calcium abundancesmore » in galaxy clusters, assuming an asymptotic calcium yield per calcium-rich event of ~0.05 M ⊙. As a result, we also study the PTF detection efficiency of these transients as a function of position within their candidate host galaxies. We confirm as a real physical effect previous results that suggest that calcium-rich transients prefer large physical offsets from their host galaxies.« less

Effect of salinity medium on antioxidant and antidiabetic activity marine endophytic fungus of asperegillus elegans ptf 9

NASA Astrophysics Data System (ADS)

Mulyani, Hani; Artanti, Nina; Fitria, Irni; Filailla, Euis; Kandace, Yoice Sri; Udin, Linar Zalinar

2017-11-01

Our previous studies on screening of antioxidant activities from various endophytic fungi isolated from marine bioata showed that A. elegans PTF9 isolated from sea weed is one of the fungus that has good antioxidant activity. In current study we reported the effect of medium salinity (0, 3 and 10% salt in PDB medium) on antioxidant and antidiabetes activity of mycelium and filtrate ethyl acetate extracts of A. elegans Ptf 9. The antioxidant assay was conducted using DPPH free radical scavenging activity method. The antidiabetes assay was conducted using a-glucosidase inhibitory activity method. The results showed that the best antioxidant activity was obtained from filtrate extract of fungus cultures with 0% salt (IC50=1.56 ppm), whereas the best antidiabetes activity was obtained from filtrate extract of fungus culture with 10% salt (IC50= 3.64 ppm). Addition of salt reduced the antioxidant activity, but not the antidiabetes activity. The results suggest that A. elegans PTF9 showed potential for further studies on isolation of antioxidant and antidiabetes lead compounds that could be use for further development of new drugs.

The Volumetric Rate of Calcium-rich Transients in the Local Universe

DOE Office of Scientific and Technical Information (OSTI.GOV)

Frohmaier, Chris; Sullivan, Mark; Maguire, Kate

Here, we present a measurement of the volumetric rate of "calcium-rich" optical transients in the local universe, using a sample of three events from the Palomar Transient Factory (PTF). This measurement builds on a detailed study of the PTF transient detection efficiencies and uses a Monte Carlo simulation of the PTF survey. We measure the volumetric rate of calcium-rich transients to be higher than previous estimates: 1.21 -0.39 +1.13 10 -5 events yr -1Mpc -3. This is equivalent to 33%-94% of the local volumetric Type Ia supernova rate. This calcium-rich transient rate is sufficient to reproduce the observed calcium abundancesmore » in galaxy clusters, assuming an asymptotic calcium yield per calcium-rich event of ~0.05 M ⊙. As a result, we also study the PTF detection efficiency of these transients as a function of position within their candidate host galaxies. We confirm as a real physical effect previous results that suggest that calcium-rich transients prefer large physical offsets from their host galaxies.« less

Hydrogen-poor Superluminous Supernovae with Late-time H α Emission: Three Events From the Intermediate Palomar Transient Factory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yan, Lin; Lunnan, R.; Perley, D. A.

We present observations of two new hydrogen-poor superluminous supernovae (SLSN-I), iPTF15esb and iPTF16bad, showing late-time Hα emission with line luminosities ofmore » $$(1\\mbox{-}3)\\times {10}^{41}$$ erg s -1 and velocity widths of (4000-6000) km s -. Including the previously published iPTF13ehe, this makes up a total of three such events to date. iPTF13ehe is one of the most luminous and the slowest evolving SLSNe-I, whereas the other two are less luminous and fast decliners. We interpret this as a result of the ejecta running into a neutral H-shell located at a radius of ~10 16 cm. This implies that violent mass loss must have occurred several decades before the supernova explosion. Such a short time interval suggests that eruptive mass loss could be common shortly before core collapse, and more importantly helium is unlikely to be completely stripped off the progenitor and could be present in the ejecta. It is a mystery why helium features are not detected, even though nonthermal energy sources, capable of ionizing He, may exist as suggested by the O ii absorption series in the early-time spectra. Our late-time spectra (+240 days) appear to have intrinsically lower [O i] 6300 Å luminosities than that of SN2015bn and SN2007bi, which is possibly an indication of less oxygen (<10 M ⊙). The blueshifted Hα emission relative to the hosts for all three events may be in tension with the binary model proposed for iPTF13ehe. Lastly, iPTF15esb has a peculiar light curve (LC) with three peaks separated from one another by ~22 days. The LC undulation is stronger in bluer bands. One possible explanation is ejecta-circumstellar medium interaction.« less

Hydrogen-poor Superluminous Supernovae with Late-time Hα Emission: Three Events From the Intermediate Palomar Transient Factory

NASA Astrophysics Data System (ADS)

Yan, Lin; Lunnan, R.; Perley, D. A.; Gal-Yam, A.; Yaron, O.; Roy, R.; Quimby, R.; Sollerman, J.; Fremling, C.; Leloudas, G.; Cenko, S. B.; Vreeswijk, P.; Graham, M. L.; Howell, D. A.; De Cia, A.; Ofek, E. O.; Nugent, P.; Kulkarni, S. R.; Hosseinzadeh, G.; Masci, F.; McCully, C.; Rebbapragada, U. D.; Woźniak, P.

2017-10-01

We present observations of two new hydrogen-poor superluminous supernovae (SLSN-I), iPTF15esb and iPTF16bad, showing late-time Hα emission with line luminosities of (1{--}3)× {10}41 erg s-1 and velocity widths of (4000-6000) km s-1. Including the previously published iPTF13ehe, this makes up a total of three such events to date. iPTF13ehe is one of the most luminous and the slowest evolving SLSNe-I, whereas the other two are less luminous and fast decliners. We interpret this as a result of the ejecta running into a neutral H-shell located at a radius of ˜1016 cm. This implies that violent mass loss must have occurred several decades before the supernova explosion. Such a short time interval suggests that eruptive mass loss could be common shortly before core collapse, and more importantly helium is unlikely to be completely stripped off the progenitor and could be present in the ejecta. It is a mystery why helium features are not detected, even though nonthermal energy sources, capable of ionizing He, may exist as suggested by the O II absorption series in the early-time spectra. Our late-time spectra (+240 days) appear to have intrinsically lower [O I] 6300 Å luminosities than that of SN2015bn and SN2007bi, which is possibly an indication of less oxygen (<10 M ⊙). The blueshifted Hα emission relative to the hosts for all three events may be in tension with the binary model proposed for iPTF13ehe. Finally, iPTF15esb has a peculiar light curve (LC) with three peaks separated from one another by ˜22 days. The LC undulation is stronger in bluer bands. One possible explanation is ejecta-circumstellar medium interaction.

Hydrogen-poor Superluminous Supernovae with Late-time H α Emission: Three Events From the Intermediate Palomar Transient Factory

DOE PAGES

Yan, Lin; Lunnan, R.; Perley, D. A.; ...

2017-10-05

We present observations of two new hydrogen-poor superluminous supernovae (SLSN-I), iPTF15esb and iPTF16bad, showing late-time Hα emission with line luminosities ofmore » $$(1\\mbox{-}3)\\times {10}^{41}$$ erg s -1 and velocity widths of (4000-6000) km s -. Including the previously published iPTF13ehe, this makes up a total of three such events to date. iPTF13ehe is one of the most luminous and the slowest evolving SLSNe-I, whereas the other two are less luminous and fast decliners. We interpret this as a result of the ejecta running into a neutral H-shell located at a radius of ~10 16 cm. This implies that violent mass loss must have occurred several decades before the supernova explosion. Such a short time interval suggests that eruptive mass loss could be common shortly before core collapse, and more importantly helium is unlikely to be completely stripped off the progenitor and could be present in the ejecta. It is a mystery why helium features are not detected, even though nonthermal energy sources, capable of ionizing He, may exist as suggested by the O ii absorption series in the early-time spectra. Our late-time spectra (+240 days) appear to have intrinsically lower [O i] 6300 Å luminosities than that of SN2015bn and SN2007bi, which is possibly an indication of less oxygen (<10 M ⊙). The blueshifted Hα emission relative to the hosts for all three events may be in tension with the binary model proposed for iPTF13ehe. Lastly, iPTF15esb has a peculiar light curve (LC) with three peaks separated from one another by ~22 days. The LC undulation is stronger in bluer bands. One possible explanation is ejecta-circumstellar medium interaction.« less

Development of a numerical pump testing framework.

PubMed

Kaufmann, Tim A S; Gregory, Shaun D; Büsen, Martin R; Tansley, Geoff D; Steinseifer, Ulrich

2014-09-01

It has been shown that left ventricular assist devices (LVADs) increase the survival rate in end-stage heart failure patients. However, there is an ongoing demand for an increased quality of life, fewer adverse events, and more physiological devices. These challenges necessitate new approaches during the design process. In this study, computational fluid dynamics (CFD), lumped parameter (LP) modeling, mock circulatory loops (MCLs), and particle image velocimetry (PIV) are combined to develop a numerical Pump Testing Framework (nPTF) capable of analyzing local flow patterns and the systemic response of LVADs. The nPTF was created by connecting a CFD model of the aortic arch, including an LVAD outflow graft to an LP model of the circulatory system. Based on the same geometry, a three-dimensional silicone model was crafted using rapid prototyping and connected to an MCL. PIV studies of this setup were performed to validate the local flow fields (PIV) and the systemic response (MCL) of the nPTF. After validation, different outflow graft positions were compared using the nPTF. Both the numerical and the experimental setup were able to generate physiological responses by adjusting resistances and systemic compliance, with mean aortic pressures of 72.2-132.6 mm Hg for rotational speeds of 2200-3050 rpm. During LVAD support, an average flow to the distal branches (cerebral and subclavian) of 24% was found in the experiments and the nPTF. The flow fields from PIV and CFD were in good agreement. Numerical and experimental tools were combined to develop and validate the nPTF, which can be used to analyze local flow fields and the systemic response of LVADs during the design process. This allows analysis of physiological control parameters at early development stages and may, therefore, help to improve patient outcomes. Copyright © 2014 International Center for Artificial Organs and Transplantation and Wiley Periodicals, Inc.

P-wave indices in patients with pulmonary emphysema: do P-terminal force and interatrial block have confounding effects?

PubMed Central

Chhabra, Lovely; Chaubey, Vinod K; Kothagundla, Chandrasekhar; Bajaj, Rishi; Kaul, Sudesh; Spodick, David H

2013-01-01

Introduction Pulmonary emphysema causes several electrocardiogram changes, and one of the most common and well known is on the frontal P-wave axis. P-axis verticalization (P-axis > 60°) serves as a quasidiagnostic indicator of emphysema. The correlation of P-axis verticalization with the radiological severity of emphysema and severity of chronic obstructive lung function have been previously investigated and well described in the literature. However, the correlation of P-axis verticalization in emphysema with other P-indices like P-terminal force in V1 (Ptf), amplitude of initial positive component of P-waves in V1 (i-PV1), and interatrial block (IAB) have not been well studied. Our current study was undertaken to investigate the effects of emphysema on these P-wave indices in correlation with the verticalization of the P-vector. Materials and methods Unselected, routinely recorded electrocardiograms of 170 hospitalized emphysema patients were studied. Significant Ptf (s-Ptf) was considered ≥40 mm.ms and was divided into two types based on the morphology of P-waves in V1: either a totally negative (−) P wave in V1 or a biphasic (+/−) P wave in V1. Results s-Ptf correlated better with vertical P-vectors than nonvertical P-vectors (P = 0.03). s-Ptf also significantly correlated with IAB (P = 0.001); however, IAB and P-vector verticalization did not appear to have any significant correlation (P = 0.23). There was a very weak correlation between i-PV1 and frontal P-vector (r = 0.15; P = 0.047); however, no significant correlation was found between i-PV1 and P-amplitude in lead III (r = 0.07; P = 0.36). Conclusion We conclude that increased P-tf in emphysema may be due to downward right atrial position caused by right atrial displacement, and thus the common assumption that increased P-tf implies left atrial enlargement should be made with caution in patients with emphysema. Also, the lack of strong correlation between i-PV1 and P-amplitude in lead III or vertical P-vector may suggest the predominant role of downward right atrial distortion rather than right atrial enlargement in causing vertical P-vector in emphysema. PMID:23690680

Application of the Trend Filtering Algorithm for Photometric Time Series Data

NASA Astrophysics Data System (ADS)

Gopalan, Giri; Plavchan, Peter; van Eyken, Julian; Ciardi, David; von Braun, Kaspar; Kane, Stephen R.

2016-08-01

Detecting transient light curves (e.g., transiting planets) requires high-precision data, and thus it is important to effectively filter systematic trends affecting ground-based wide-field surveys. We apply an implementation of the Trend Filtering Algorithm (TFA) to the 2MASS calibration catalog and select Palomar Transient Factory (PTF) photometric time series data. TFA is successful at reducing the overall dispersion of light curves, however, it may over-filter intrinsic variables and increase “instantaneous” dispersion when a template set is not judiciously chosen. In an attempt to rectify these issues we modify the original TFA from the literature by including measurement uncertainties in its computation, including ancillary data correlated with noise, and algorithmically selecting a template set using clustering algorithms as suggested by various authors. This approach may be particularly useful for appropriately accounting for variable photometric precision surveys and/or combined data sets. In summary, our contributions are to provide a MATLAB software implementation of TFA and a number of modifications tested on synthetics and real data, summarize the performance of TFA and various modifications on real ground-based data sets (2MASS and PTF), and assess the efficacy of TFA and modifications using synthetic light curve tests consisting of transiting and sinusoidal variables. While the transiting variables test indicates that these modifications confer no advantage to transit detection, the sinusoidal variables test indicates potential improvements in detection accuracy.

Nutritional Profile and Chemical Stability of Pasta Fortified with Tilapia (Oreochromis niloticus) Flour

PubMed Central

Monteiro, Maria Lúcia G.; Mársico, Eliane T.; Soares, Manoel S.; Magalhães, Amanda O.; Canto, Anna Carolina V. C. S.; Costa-Lima, Bruno R. C.; Alvares, Thiago S.; Conte, Carlos A.

2016-01-01

Physicochemical parameters of pasta enriched with tilapia (Oreochromis niloticus) flour were investigated. Five formulations were prepared with different concentrations of tilapia flour as partial substitute of wheat flour: pasta without tilapia flour (PTF0%), pasta with 6% (PTF6%), 12% (PTF12%), 17% (PTF17%), and 23% (PTF23%) of tilapia flour. The formulations were assessed for proximate composition, fatty acid and amino acid profile on day 1 whereas, instrumental color parameters (L*, a* and b* values), pH, water activity (aw), and lipid and protein oxidation were evaluated on days 1, 7, 14, and 21 of storage at 25°C. Fortification with tilapia flour increased (p < 0.05) protein, lipid, ash, total essential amino acids, and total polyunsaturated fatty acids contents. In addition, supplementation of pasta with tilapia flour decreased (p < 0.05) lightness and water activity while redness, yellowness, pH values, and lipid oxidation were increased (p < 0.05) in a level-dependent manner. Nevertheless, all formulations were exhibited storage stability at 25°C. In general, protein oxidation was greater (p < 0.05) in the pasta containing 12%, 17%, and 23% of tilapia flour than their counterparts, and the storage promoted an increase (p < 0.05) on the carbonyl content in all formulations. Thus, pasta with 6% of tilapia flour has the potential to be a technological alternative to food industry for the nutritional enrichment of traditional pasta with negligible negative effects on the chemical stability of the final product during 21 days at 25°C. PMID:27973565

Nutritional Profile and Chemical Stability of Pasta Fortified with Tilapia (Oreochromis niloticus) Flour.

PubMed

Monteiro, Maria Lúcia G; Mársico, Eliane T; Soares, Manoel S; Magalhães, Amanda O; Canto, Anna Carolina V C S; Costa-Lima, Bruno R C; Alvares, Thiago S; Conte, Carlos A

2016-01-01

Physicochemical parameters of pasta enriched with tilapia (Oreochromis niloticus) flour were investigated. Five formulations were prepared with different concentrations of tilapia flour as partial substitute of wheat flour: pasta without tilapia flour (PTF0%), pasta with 6% (PTF6%), 12% (PTF12%), 17% (PTF17%), and 23% (PTF23%) of tilapia flour. The formulations were assessed for proximate composition, fatty acid and amino acid profile on day 1 whereas, instrumental color parameters (L*, a* and b* values), pH, water activity (aw), and lipid and protein oxidation were evaluated on days 1, 7, 14, and 21 of storage at 25°C. Fortification with tilapia flour increased (p < 0.05) protein, lipid, ash, total essential amino acids, and total polyunsaturated fatty acids contents. In addition, supplementation of pasta with tilapia flour decreased (p < 0.05) lightness and water activity while redness, yellowness, pH values, and lipid oxidation were increased (p < 0.05) in a level-dependent manner. Nevertheless, all formulations were exhibited storage stability at 25°C. In general, protein oxidation was greater (p < 0.05) in the pasta containing 12%, 17%, and 23% of tilapia flour than their counterparts, and the storage promoted an increase (p < 0.05) on the carbonyl content in all formulations. Thus, pasta with 6% of tilapia flour has the potential to be a technological alternative to food industry for the nutritional enrichment of traditional pasta with negligible negative effects on the chemical stability of the final product during 21 days at 25°C.

Pancreatic Agenesis due to Compound Heterozygosity for a Novel Enhancer and Truncating Mutation in the PTF1A Gene.

PubMed

Gabbay, Monica; Ellard, Sian; De Franco, Elisa; Moisés, Regina S

2017-09-01

Neonatal diabetes, defined as the onset of diabetes within the first six months of life, is very rarely caused by pancreatic agenesis. Homozygous truncating mutations in the PTF1A gene, which encodes a transcriptional factor, have been reported in patients with pancreatic and cerebellar agenesis, whilst mutations located in a distal pancreatic-specific enhancer cause isolated pancreatic agenesis. We report an infant, born to healthy non-consanguineous parents, with neonatal diabetes due to pancreatic agenesis. Initial genetic investigation included sequencing of KCNJ11, ABCC8 and INS genes, but no mutations were found. Following this, 22 neonatal diabetes associated genes were analyzed by a next generation sequencing assay. We found compound heterozygous mutations in the PTF1A gene: A frameshift mutation in exon 1 (c.437_462 del, p.Ala146Glyfs*116) and a mutation affecting a highly conserved nucleotide within the distal pancreatic enhancer (g.23508442A>G). Both mutations were confirmed by Sanger sequencing. Isolated pancreatic agenesis resulting from compound heterozygosity for truncating and enhancer mutations in the PTF1A gene has not been previously reported. This report broadens the spectrum of mutations causing pancreatic agenesis.

Pancreatic Agenesis due to Compound Heterozygosity for a Novel Enhancer and Truncating Mutation in the PTF1A Gene

PubMed Central

Gabbay, Monica; Ellard, Sian; De Franco, Elisa; Moisés, Regina S.

2017-01-01

Neonatal diabetes, defined as the onset of diabetes within the first six months of life, is very rarely caused by pancreatic agenesis. Homozygous truncating mutations in the PTF1A gene, which encodes a transcriptional factor, have been reported in patients with pancreatic and cerebellar agenesis, whilst mutations located in a distal pancreatic-specific enhancer cause isolated pancreatic agenesis. We report an infant, born to healthy non-consanguineous parents, with neonatal diabetes due to pancreatic agenesis. Initial genetic investigation included sequencing of KCNJ11, ABCC8 and INS genes, but no mutations were found. Following this, 22 neonatal diabetes associated genes were analyzed by a next generation sequencing assay. We found compound heterozygous mutations in the PTF1A gene: A frameshift mutation in exon 1 (c.437_462 del, p.Ala146Glyfs*116) and a mutation affecting a highly conserved nucleotide within the distal pancreatic enhancer (g.23508442A>G). Both mutations were confirmed by Sanger sequencing. Isolated pancreatic agenesis resulting from compound heterozygosity for truncating and enhancer mutations in the PTF1A gene has not been previously reported. This report broadens the spectrum of mutations causing pancreatic agenesis. PMID:28663161

PTF11mnb: First analog of supernova 2005bf: Long-rising, double-peaked supernova Ic from a massive progenitor*

DOE Office of Scientific and Technical Information (OSTI.GOV)

Taddia, F.; Sollerman, J.; Fremling, C.

The aim is to study PTF11mnb, a He-poor supernova (SN) whose light curves resemble those of SN 2005bf, a peculiar double-peaked stripped-envelope (SE) SN, until the declining phase after the main peak. We investigate the mechanism powering its light curve and the nature of its progenitor star. Methods. Optical photometry and spectroscopy of PTF11mnb are presented. We compared light curves, colors and spectral properties to those of SN 2005bf and normal SE SNe. We built a bolometric light curve and modeled this light curve with the SuperNova Explosion Code (SNEC) hydrodynamical code explosion of a MESA progenitor star and semi-analyticmore » models. Results. The light curve of PTF11mnb turns out to be similar to that of SN 2005bf until ~50 d when the main (secondary) peaks occur at -18.5 mag. The early peak occurs at ~20 d and is about 1.0 mag fainter. After the main peak, the decline rate of PTF11mnb is remarkably slower than what was observed in SN 2005bf, and it traces well the 56Co decay rate. The spectra of PTF11mnb reveal a SN Ic and have no traces of He unlike in the case of SN Ib 2005bf, although they have velocities comparable to those of SN 2005bf. The whole evolution of the bolometric light curve is well reproduced by the explosion of a massive (M ej = 7.8 M ⊙ ), He-poor star characterized by a double-peaked 56 Ni distribution, a total 56 Ni mass of 0.59 M ⊙ , and an explosion energy of 2.2 × 10 51 erg. Alternatively, a normal SN Ib/c explosion (M( 56Ni) = 0.11 M ⊙ , E K = 0.2 × 10 51 erg, M ej = 1 M ⊙ ) can power the first peak while a magnetar, with a magnetic field characterized by B = 5.0 × 10 14 G, and a rotation period of P = 18.1 ms, provides energy for the main peak. The early g-band light curve can be fit with a shock-breakout cooling tail or an extended envelope model from which a radius of at least 30 R ⊙ is obtained. Conclusions. We presented a scenario where PTF11mnb was the explosion of a massive, He-poor star, characterized by a double-peaked 56Ni distribution. In this case, the ejecta mass and the absence of He imply a large ZAMS mass (~85 M ⊙) for the progenitor, which most likely was a Wolf-Rayet star, surrounded by an extended envelope formed either by a pre-SN eruption or due to a binary configuration. Alternatively, PTF11mnb could be powered by a SE SN with a less massive progenitor during the first peak and by a magnetar afterward.« less

iPTF report of bright transients

NASA Astrophysics Data System (ADS)

Cannella, Chris; Kuesters, Daniel; Ferretti, Raphael; Blagorodnova, Nadejda; Adams, Scott; Kupfer, Thomas; Neill, James D.; Walters, Richard; Yan, Lin; Kulkarni, Shri

2017-02-01

The intermediate Palomar Transient Factory (iPTF; ATel #4807) reports the following bright ( Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R), and RB5 (Wozniak et al. 2013AAS...22143105W).

Tissue-specific deletion of c-Jun in the pancreas has limited effects on pancreas formation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yamamoto, Kaoru; Miyatsuka, Takeshi; Tanaka, Ayako

2007-11-30

It is well known that activating protein-1 (AP-1) is involved in a variety of cellular functions such as proliferation, differentiation, apoptosis, and oncogenesis. AP-1 is a dimer complex consisting of different subunits, and c-Jun is known to be one of its major components. In addition, it has been shown that mice lacking c-Jun are embryonic lethal and that c-Jun is essential for liver and heart development. However, the role of c-Jun in the pancreas is not well known. The aim of this study was to examine the possible role of c-Jun in the pancreas. First, c-Jun was strongly expressed inmore » pancreatic duct-like structures at an embryonic stage, while a lower level of expression was observed in some part of the adult pancreas, implying that c-Jun might play a role during pancreas development. Second, to address this point, we generated pancreas-specific c-Jun knock-out mice (Ptf1a-Cre; c-Jun{sup flox/flox} mice) by crossing Ptf1a-Cre knock-in mice with c-Jun floxed mice. Ptf1a is a pancreatic transcription factor and its expression is confined to pancreatic stem/progenitor cells, which give rise to all three types of pancreatic tissue: endocrine, exocrine, and duct. Contrary to our expectation, however, there was no morphological difference in the pancreas between Ptf1a-Cre; c-Jun{sup flox/flox} and control mice. In addition, there was no difference in body weight, pancreas weight, and the expression of various pancreas-related factors (insulin, glucagon, cytokeratin, and amylase) between the two groups. Furthermore, there was no difference in glucose tolerance between Ptf1a-Cre; c-Jun{sup flox/flox} and control mice. Taken together, although we cannot exclude the possibility that c-Jun ablation is compensated by some unknown factors, c-Jun appears to be dispensable for pancreas development at least after ptf1a gene promoter is activated.« less

Posterior Temporary Fixation Versus Nonoperative Treatment for Anderson-D'Alonzo Type III Odontoid Fractures: Functional Computed Tomography Evaluation of C1-C2 Rotation.

PubMed

Guo, Qunfeng; Wang, Liang; Lu, Xuhua; Guo, Xiang; Ni, Bin

2017-04-01

To evaluate differences in radiologic and functional outcomes between C1-C2 posterior temporary fixation (PTF) and cephalocervicothoracic cast fixation for type III odontoid fractures. Data from 13 patients who underwent PTF and 13 cases who underwent cephalocervicothoracic cast fixation due to fresh type III odontoid fractures were reviewed retrospectively. All patients with fracture healing underwent a functional computed tomography scan at the final follow-up to evaluate the range of motion in C1-C2 rotation. Functional outcomes were evaluated in the form of visual analog scale for neck pain, neck stiffness, patient satisfaction, and Neck Disability Index. The outcomes were compared between the 2 groups. At the final follow up, all 26 patients achieved healing of their fractures. There were no complications associated with either treatment. The left-to-right ranges of motion of C1-C2 rotation were 41.9° ± 11.9° in the PTF group and 43.5° ± 12.0° in the cephalocervicothoracic cast fixation group. There was no statistical difference between the 2 groups regarding the C1-C2 rotation angle (P > 0.05). There also were no significant differences between 2 groups in functional outcomes evaluated by visual analog scale for neck pain, neck stiffness, Neck Disability Index, and patient satisfaction (all P > 0.05). The outcomes of PTF and cephalocervicothoracic cast fixation were comparable in the treatment of type III odontoid fractures. For type III odontoid fractures that cannot be managed by nonoperative fixation or anterior screw fixation, PTF may be the treatment of choice, because it spares the motion of the C1-C2 complex. Copyright © 2016 Elsevier Inc. All rights reserved.

Type Ibn Supernovae Show Photometric Homogeneity and Spectral Diversity at Maximum Light

DOE PAGES

Hosseinzadeh, Griffin; Arcavi, Iair; Valenti, Stefano; ...

2017-02-16

Type Ibn supernovae (SNe) are a small yet intriguing class of explosions whose spectra are characterized by low-velocity helium emission lines with little to no evidence for hydrogen. The prevailing theory has been that these are the core-collapse explosions of very massive stars embedded in helium-rich circumstellar material (CSM). We report optical observations of six new SNe Ibn: PTF11rfh, PTF12ldy, iPTF14aki, iPTF15ul, SN 2015G, and iPTF15akq. This brings the sample size of such objects in the literature to 22. We also report new data, including a near-infrared spectrum, on the Type Ibn SN 2015U. In order to characterize the classmore » as a whole, we analyze the photometric and spectroscopic properties of the full Type Ibn sample. Here, we find that, despite the expectation that CSM interaction would generate a heterogeneous set of light curves, as seen in SNe IIn, most Type Ibn light curves are quite similar in shape, declining at rates around 0.1 mag day -1 during the first month after maximum light, with a few significant exceptions. Early spectra of SNe Ibn come in at least two varieties, one that shows narrow P Cygni lines and another dominated by broader emission lines, both around maximum light, which may be an indication of differences in the state of the progenitor system at the time of explosion. Alternatively, the spectral diversity could arise from viewing-angle effects or merely from a lack of early spectroscopic coverage. Finally, together, the relative light curve homogeneity and narrow spectral features suggest that the CSM consists of a spatially confined shell of helium surrounded by a less dense extended wind.« less

Human Milk Fortifiers Do Not Meet the Current Recommendation for Nutrients in Very Low Birth Weight Infants.

PubMed

Koo, Winston; Tice, Hilary

2017-06-01

Use of multinutrient fortifiers is standard of care for small preterm infants fed exclusively human milk. However, adequacy of human milk fortifiers (HMFs) to meet the recommended intake for macronutrients and micronutrients is now known. Nutrient content of human milk fortified according to manufacturer's recommendations was compared at isocaloric levels for 1 human milk-based (HMF-A), 2 bovine milk protein-based (HMF-B, HMF-C), and 2 preterm infant formulas (PTF-B, PTF-C). In addition, 4 multivitamin supplements were compared. At 130 kcal/kg, intake of macronutrients was similar to the recommendation, although deficient and excess intake of micronutrient occurred with all fortifiers. Four to 9 micronutrients were absent in HMF or PTF (biotin, choline, inositol, carnitine, taurine, molybdenum, iodine, selenium, or chromium). For the remainder, HMF resulted in deficient intake for 1-13 micronutrients, occurring most frequently with HMF-A. Excess micronutrients (3-15 at <50% and 1-3 at 109%-437%) occurred with all HMF and most frequently with HMF-B and HMF-C. At 150 kcal/kg, deficient intake improved but generally remained below recommendation, while excess intake became exaggerated. PTF and multivitamin formulations do not fully compensate for the deficiencies and can result in extremely high micronutrient intake. At the recommended energy intake for very low birth weight infants, many micronutrients are absent or are present in grossly inadequate amounts, and several micronutrients are in excess. Reformulation of HMF is urgently needed since PTF or multivitamin supplement only partially corrects some deficiencies while providing some nutrients in excess. ( JPEN J Parenter Enteral Nutr. XXXX;xx:xx-xx).

A simple hand-held magnet array for efficient and reproducible SABRE hyperpolarisation using manual sample shaking.

PubMed

Richardson, Peter M; Jackson, Scott; Parrott, Andrew J; Nordon, Alison; Duckett, Simon B; Halse, Meghan E

2018-07-01

Signal amplification by reversible exchange (SABRE) is a hyperpolarisation technique that catalytically transfers nuclear polarisation from parahydrogen, the singlet nuclear isomer of H 2 , to a substrate in solution. The SABRE exchange reaction is carried out in a polarisation transfer field (PTF) of tens of gauss before transfer to a stronger magnetic field for nuclear magnetic resonance (NMR) detection. In the simplest implementation, polarisation transfer is achieved by shaking the sample in the stray field of a superconducting NMR magnet. Although convenient, this method suffers from limited reproducibility and cannot be used with NMR spectrometers that do not have appreciable stray fields, such as benchtop instruments. Here, we use a simple hand-held permanent magnet array to provide the necessary PTF during sample shaking. We find that the use of this array provides a 25% increase in SABRE enhancement over the stray field approach, while also providing improved reproducibility. Arrays with a range of PTFs were tested, and the PTF-dependent SABRE enhancements were found to be in excellent agreement with comparable experiments carried out using an automated flow system where an electromagnet is used to generate the PTF. We anticipate that this approach will improve the efficiency and reproducibility of SABRE experiments carried out using manual shaking and will be particularly useful for benchtop NMR, where a suitable stray field is not readily accessible. The ability to construct arrays with a range of PTFs will also enable the rapid optimisation of SABRE enhancement as function of PTF for new substrate and catalyst systems. © 2017 The Authors Magnetic Resonance in Chemistry Published by John Wiley & Sons Ltd.

Type Ibn Supernovae Show Photometric Homogeneity and Spectral Diversity at Maximum Light

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hosseinzadeh, Griffin; Arcavi, Iair; McCully, Curtis

2017-02-20

Type Ibn supernovae (SNe) are a small yet intriguing class of explosions whose spectra are characterized by low-velocity helium emission lines with little to no evidence for hydrogen. The prevailing theory has been that these are the core-collapse explosions of very massive stars embedded in helium-rich circumstellar material (CSM). We report optical observations of six new SNe Ibn: PTF11rfh, PTF12ldy, iPTF14aki, iPTF15ul, SN 2015G, and iPTF15akq. This brings the sample size of such objects in the literature to 22. We also report new data, including a near-infrared spectrum, on the Type Ibn SN 2015U. In order to characterize the classmore » as a whole, we analyze the photometric and spectroscopic properties of the full Type Ibn sample. We find that, despite the expectation that CSM interaction would generate a heterogeneous set of light curves, as seen in SNe IIn, most Type Ibn light curves are quite similar in shape, declining at rates around 0.1 mag day{sup −1} during the first month after maximum light, with a few significant exceptions. Early spectra of SNe Ibn come in at least two varieties, one that shows narrow P Cygni lines and another dominated by broader emission lines, both around maximum light, which may be an indication of differences in the state of the progenitor system at the time of explosion. Alternatively, the spectral diversity could arise from viewing-angle effects or merely from a lack of early spectroscopic coverage. Together, the relative light curve homogeneity and narrow spectral features suggest that the CSM consists of a spatially confined shell of helium surrounded by a less dense extended wind.« less

VizieR Online Data Catalog: Photometry of the transient event iPTF16fnl (Blagorodnova+, 2017)

NASA Astrophysics Data System (ADS)

Blagorodnova, N.; Gezari, S.; Hung, T.; Kulkarni, S. R.; Cenko, S. B.; Pasham, D. R.; Yan, L.; Arcavi, I.; Ben-Ami, S.; Bue, B. D.; Cantwell, T.; Cao, Y.; Castro-Tirado, A. J.; Fender, R.; Fremling, C.; Gal-Yam, A.; Ho, A. Y. Q.; Horesh, A.; Hosseinzadeh, G.; Kasliwal, M. M.; Kong, A. K. H.; Laher, R. R.; Leloudas, G.; Lunnan, R.; Masci, F. J.; Mooley, K.; Neill, J. D.; Nugent, P.; Powell, M.; Valeev, A. F.; Vreeswijk, P. M.; Walters, R.; Wozniak, P.

2018-03-01

On the night after discovery (2016 August 29th), we observed the source with the FLOYDS spectrograph on the Las Cumbres Observatory (LCO) 2m telescope and the Spectral Energy Distribution Machine (SEDM) on the Palomar 60 inch (P60) telescope. The SEDM is a ultra-low resolution (R~100) integral-field-unit (IFU) spectrograph. Following spectroscopic identification of iPTF16fnl as a tidal disruption event (TDE) candidate, the source was monitored at Palomar and by the Ultraviolet and Optical Telescope (UVOT) on board the Swift observatory. The UVOT observations were taken in UVW2, UVM2, UVW1, U, B, and V. At Palomar, photometry in the g and Mould-R bands were obtained with the iPTF mosaic wide-field camera on the Palomar 48-inch telescope (P48). Table 3 reports the measured Swift aperture photometry magnitudes and the difference-imaging photometry for the Palomar data spanning 2016 Aug to 2016 Dec. Radio follow-up observations of iPTF16fnl were taken with the Jansky Very Large Array (VLA; PI A. Horesh), the Arcminute Microkelvin Imager (AMI; PI K. Mooley) and the James Clerk Maxwell Telescope and the Submillimetre Common-User Bolometer Array 2 (JCMT/SCUBA-2; PI A. K. H. Kong). We also observed the location of iPTF16fnl with the X-Ray Telescope (XRT) on board the Swift satellite beginning at 19:32 UT on 30 August 2016. Regular monitoring of the field in photon counting mode continued over the course of the next four months (PIs T. Holoien and B. Cenko). (1 data file).

Reflector-based phase calibration of ultrasound transducers.

PubMed

van Neer, Paul L M J; Vos, Hendrik J; de Jong, Nico

2011-01-01

Recently, the measurement of phase transfer functions (PTFs) of piezoelectric transducers has received more attention. These PTFs are useful for e.g. coding and interference based imaging methods, and ultrasound contrast microbubble research. Several optical and acoustic methods to measure a transducer's PTF have been reported in literature. The optical methods require a setup to which not all ultrasound laboratories have access to. The acoustic methods require accurate distance and acoustic wave speed measurements. A small error in these leads to a large error in phase, e.g. an accuracy of 0.1% on an axial distance of 10cm leads to an uncertainty in the PTF measurement of ±97° at 4MHz. In this paper we present an acoustic pulse-echo method to measure the PTF of a transducer, which is based on linear wave propagation and only requires an estimate of the wave travel distance and the acoustic wave speed. In our method the transducer is excited by a monofrequency sine burst with a rectangular envelope. The transducer initially vibrates at resonance (transient regime) prior to the forcing frequency response (steady state regime). The PTF value of the system is the difference between the phases deduced from the transient and the steady state regimes. Good agreement, to within 7°, was obtained between KLM simulations and measurements on two transducers in a 1-8MHz frequency range. The reproducibility of the method was ±10°, with a systematic error of 2° at 1MHz increasing to 16° at 8MHz. This work demonstrates that the PTF of a transducer can be measured in a simple laboratory setting. Copyright © 2010 Elsevier B.V. All rights reserved.

VizieR Online Data Catalog: PTF11mnb Bgri light curves (Taddia+, 2018)

NASA Astrophysics Data System (ADS)

Taddia, F.; Sollerman, J.; Fremling, C.; Karamehmetoglu, E.; Quimby, R. M.; Gal-Yam, A.; Yaron, O.; Kasliwal, M. M.; Kulkarni, S. R.; Nugent, P. E.; Smadja, G.; Tao, C.

2018-01-01

The Palomar Transient Factory first detected PTF11mnb at RA=00:34:13.25 and DE=+02:48:31.4 (J2000.0) on JD 2455804.857 (Aug. 31 2011) (g = 21:07+/-0.31mag ) using the 48-inch Samuel Oschin telescope (P48) at Palomar Observatory, equipped with the 96 Mpixel mosaic camera CFH12K. PTF11mnb was observed with P48 in the g band until ~60d and until ~50-days in the r band. We also made use of the Palomar 60-inch telescope (P60), with which we observed the SN in Bgri bands, starting at ~20d with the r band (Bgi band coverage started from ~40d). The SN was detected for the last time at ~140-days with P60. (1 data file).

PTF13efv—AN OUTBURST 500 DAYS PRIOR TO THE SNHUNT 275 EXPLOSION AND ITS RADIATIVE EFFICIENCY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ofek, E. O.; Strotjohann, N.-L.; Rubin, A.

The progenitors of some supernovae (SNe) exhibit outbursts with super-Eddington luminosities prior to their final explosions. This behavior is common among SNe IIn, but the driving mechanisms of these precursors are not yet well-understood. SNHunt 275 was announced as a possible new SN during 2015 May. Here we report on pre-explosion observations of the location of this event by the Palomar Transient Factory (PTF) and report the detection of a precursor about 500 days prior to the 2015 May activity (PTF 13efv). The observed velocities in the 2015 transient and its 2013 precursor absorption spectra are low (1000–2000 km s{supmore » −1}), so it is not clear yet if the recent activity indeed marks the final disruption of the progenitor. Regardless of the nature of this event, we use the PTF photometric and spectral observations, as well as Swift -UVOT observations, to constrain the efficiency of the radiated energy relative to the total kinetic energy of the precursor. We find that, using an order-of-magnitude estimate and under the assumption of spherical symmetry, the ratio of the radiated energy to the kinetic energy is in the range of 4 × 10{sup −2} to 3.4 × 10{sup 3}.« less

PTF11mnb: First analog of supernova 2005bf. Long-rising, double-peaked supernova Ic from a massive progenitor

NASA Astrophysics Data System (ADS)

Taddia, F.; Sollerman, J.; Fremling, C.; Karamehmetoglu, E.; Quimby, R. M.; Gal-Yam, A.; Yaron, O.; Kasliwal, M. M.; Kulkarni, S. R.; Nugent, P. E.; Smadja, G.; Tao, C.

2018-01-01

Aims: We study PTF11mnb, a He-poor supernova (SN) whose light curves resemble those of SN 2005bf, a peculiar double-peaked stripped-envelope (SE) SN, until the declining phase after the main peak. We investigate the mechanism powering its light curve and the nature of its progenitor star. Methods: Optical photometry and spectroscopy of PTF11mnb are presented. We compared light curves, colors and spectral properties to those of SN 2005bf and normal SE SNe. We built a bolometric light curve and modeled this light curve with the SuperNova Explosion Code (SNEC) hydrodynamical code explosion of a MESA progenitor star and semi-analytic models. Results: The light curve of PTF11mnb turns out to be similar to that of SN 2005bf until 50 d when the main (secondary) peaks occur at -18.5 mag. The early peak occurs at 20 d and is about 1.0 mag fainter. After the main peak, the decline rate of PTF11mnb is remarkably slower than what was observed in SN 2005bf, and it traces well the 56Co decay rate. The spectra of PTF11mnb reveal a SN Ic and have no traces of He unlike in the case of SN Ib 2005bf, although they have velocities comparable to those of SN 2005bf. The whole evolution of the bolometric light curve is well reproduced by the explosion of a massive (Mej = 7.8 M⊙), He-poor star characterized by a double-peaked 56Ni distribution, a total 56Ni mass of 0.59 M⊙, and an explosion energy of 2.2 × 1051 erg. Alternatively, a normal SN Ib/c explosion (M(56Ni) = 0.11 M⊙, EK = 0.2 × 1051 erg, Mej = 1 M⊙) can power the first peak while a magnetar, with a magnetic field characterized by B = 5.0 × 1014 G, and a rotation period of P = 18.1 ms, provides energy for the main peak. The early g-band light curve can be fit with a shock-breakout cooling tail or an extended envelope model from which a radius of at least 30 R⊙ is obtained. Conclusions: We presented a scenario where PTF11mnb was the explosion of a massive, He-poor star, characterized by a double-peaked 56Ni distribution. In this case, the ejecta mass and the absence of He imply a large ZAMS mass ( 85 M⊙) for the progenitor, which most likely was a Wolf-Rayet star, surrounded by an extended envelope formed either by a pre-SN eruption or due to a binary configuration. Alternatively, PTF11mnb could be powered by a SE SN with a less massive progenitor during the first peak and by a magnetar afterward. Photometric tables are only available at the CDS via anonymous ftp to cdsarc.u-strasbg.fr (130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/609/A106

Time Transfer With the Galileo Precise Timing Facility

DTIC Science & Technology

2007-11-01

being designed on the basis of three techniques: TWSTFT , CV, and use of OSPF products. The last technique implies interfacing an external facility...hydrogen masers (AHM) manufactured by T4S (Switzerland) and the 4 cesiums by Symmetricom. • Time Transfer Subsystem This includes the TWSTFT Station...PTF GACF MUCF TSP GMS UTC(k) BIPM OSPF GSS GalileoSat TWSTFT links Slave PTF CV links 442 39th Annual Precise Time and Time Interval

Developing Predictive Models for Algal Bloom Occurrence and Identifying Factors Controlling their Occurrence in the Charlotte County and Surroundings

NASA Astrophysics Data System (ADS)

Karki, S.; Sultan, M.; Elkadiri, R.; Chouinard, K.

2017-12-01

Numerous occurrences of harmful algal blooms (Karenia Brevis) were reported from Southwest Florida along the coast of Charlotte County, Florida. We are developing data-driven (remote sensing, field, and meteorological data) models to accomplish the following: (1) identify the factors controlling bloom development, (2) forecast bloom occurrences, and (3) make recommendations for monitoring variables that are found to be most indicative of algal bloom occurrences and for identifying optimum locations for monitoring stations. To accomplish these three tasks we completed/are working on the following steps. Firstly, we developed an automatic system for downloading and processing of ocean color data acquired through MODIS Terra and MODIS Aqua products using SeaDAS ocean color processing software. Examples of extracted variables include: chlorophyll a (OC3M), chlorophyll a Generalized Inherent Optical Property (GIOP), chlorophyll a Garver-Siegel- Maritorena (GSM), sea surface temperature (SST), Secchi disk depth, euphotic depth, turbidity index, wind direction and speed, colored dissolved organic material (CDOM). Secondly we are developing a GIS database and a web-based GIS to host the generated remote sensing-based products in addition to relevant meteorological and field data. Examples of the meteorological and field inputs include: precipitation amount and rates, concentrations of nitrogen, phosphorous, fecal coliform and Dissolved Oxygen (DO). Thirdly, we are constructing and validating a multivariate regression model and an artificial neural network model to simulate past algal bloom occurrences using the compiled archival remote sensing, meteorological, and field data. The validated model will then be used to predict the timing and location of algal bloom occurrences. The developed system, upon completion, could enhance the decision making process, improve the citizen's quality of life, and strengthen the local economy.

Carbohydrates and activity of natural and recombinant tissue factor.

PubMed

Krudysz-Amblo, Jolanta; Jennings, Mark E; Mann, Kenneth G; Butenas, Saulius

2010-01-29

The effect of glycosylation on tissue factor (TF) activity was evaluated, and site-specific glycosylation of full-length recombinant TF (rTF) and that of natural TF from human placenta (pTF) were studied by liquid chromatography-tandem mass spectrometry. The amidolytic activity of the TF.factor VIIa (FVIIa) complex toward a fluorogenic substrate showed that the catalytic efficiency (V(max)) of the complex increased in the order rTF(1-243) (Escherichia coli) < rTF(1-263) (Sf9 insect cells) < pTF for the glycosylated and deglycosylated forms. Substrate hydrolysis was unaltered by deglycosylation. In FXase, the K(m) of FX for rTF(1-263)-FVIIa remained unchanged after deglycosylation, whereas the k(cat) decreased slightly. A pronounced decrease, 4-fold, in k(cat) was observed for pTF.FVIIa upon deglycosylation, whereas the K(m) was minimally altered. The parameters of FX activation by both rTF(1-263D)-FVIIa and pTF(D)-FVIIa were identical and similar to those for rTF(1-243)-FVIIa. In conclusion, carbohydrates significantly influence the activity of TF proteins. Carbohydrate analysis revealed glycosylation on asparagines 11, 124, and 137 in both rTF(1-263) and pTF. The carbohydrates of rTF(1-263) contain high mannose, hybrid, and fucosylated glycans. Natural pTF contains no high mannose glycans but is modified with hybrid, highly fucosylated, and sialylated sugars.

Early Radio and X-Ray Observations of the Youngest Nearby Type Ia Supernova PTF 11kly (SN 2011fe)

NASA Technical Reports Server (NTRS)

Horesh, Assaf; Kulkarni, S. R.; Fox, Derek B.; Carpenter, John; Kasliwal, Mansi M.; Ofek, Eran O.; Quimby, Robert; Gal-Yam, Avishay; Cenko, S. Bradley; deBruyn, A. G.;

Optical and near-infrared study of the Ca-rich transient iPTF15eqv in the early phase

NASA Astrophysics Data System (ADS)

Kawahara, Naoki; Yamanaka, Masayuki; Kawabata, Koji; Nakaoka, Tatsuya; Kawabata, Miho; Maeda, Keiichi; Takaki, Katsutoshi; Akitaya, Hiroshi; Itoh, Ryosuke; Moritani, Yuki; Uemura, Makoto; Yoshida, Michitoshi

2018-01-01

Supernovae (SNe) exhibiting strong calcium features in their spectra are called Ca-rich transients. Frequently their early-phase spectra also exhibit helium absorption lines. They are mostly discovered in elliptical galaxies or at a remote location far from the host galaxy center. Well-observed samples are still too limited to clarify the explosion and progenitor properties. We present optical and near-infrared observations of a Ca-rich transient iPTF15eqv in the spiral galaxy NGC 3430. The data are obtained using 1.5-m Kanata telescope since Sep 28, 2015. While the discovery was at a post-maximum-phase, we infer the maximum date to be 30 days before the discovery date, by comparing its light curve and spectroscopic evolution to those of well-observed samples. The spectra exhibit absorption lines of He I and prominent emission lines of Ca II IR and [Ca II] from +31 to 69 d after the maximum date. We find that iPTF15eqv is more luminous than other Ca-rich transients by 1.5 to 2 mag on +31 d, and we estimate that the peak absolute magnitude in the R band is approximately -18 to -16.5 mag. The decline rate of the light curve between 30 and 60 d is similar to those of SNe Ib/c. The line velocity of the helium is similar to those of Ca-rich transients but also to SNe Ib. The ejecta properties inferred from our observations indicate that iPTF15eqv has a larger nickel mass than typical Ca-rich transients. While these properties show similarity to SNe Ib, we show that most of these properties are indeed shared by other Ca-rich transients. The properties of iPTF15eqv may thus still be regarded to be within the diversities among the Ca-rich transients.

HyspIRI Intelligent Payload Module(IPM) and Benchmarking Algorithms for Upload

NASA Technical Reports Server (NTRS)

Mandl, Daniel

2010-01-01

Features: Hardware: a) Xilinx Virtex-5 (GSFC Space Cube 2); b) 2 x 400MHz PPC; c) 100MHz Bus; d) 2 x 512MB SDRAM; e) Dual Gigabit Ethernet. Support Linux kernel 2.6.31 (gcc version 4.2.2). Support software running in stand alone mode for better performance. Can stream raw data up to 800 Mbps. Ready for operations. Software Application Examples: Band-stripping Algiotrhmsl:cloud, sulfur, flood, thermal, SWIL, NDVI, NDWI, SIWI, oil spills, algae blooms, etc. Corrections: geometric, radiometric, atmospheric. Core Flight System/dynamic software bus. CCSDS File Delivery Protocol. Delay Tolerant Network. CASPER /onboard planning. Fault monitoring/recovery software. S/C command and telemetry software. Data compression. Sensor Web for Autonomous Mission Operations.

Kinetics, Energetics and Infrared Lasing in High Energy Rocket Propellant Ingredients at Cryogenic Temperatures

DTIC Science & Technology

1977-03-01

below 183 K and it can be transferred through glassware in vacuum rack manipulations, a white polymer is al- ways left behind where the ketone had been...produced a white solid, stable at room temperature, from red gaseous PtF6 and colorless Xe. It was XePtf6 -_ the first confirmed noble gas compound. As...compound phase of our synthesis research was reluctantly discontinued.. It is interesting however to note thot exciplexes formed from noble .gas atoms are

Advection of Karenia brevis blooms from the Florida Panhandle towards Mississippi coastal waters.

PubMed

Soto, Inia M; Cambazoglu, Mustafa Kemal; Boyette, Adam D; Broussard, Kristina; Sheehan, Drew; Howden, Stephan D; Shiller, Alan M; Dzwonkowski, Brian; Hode, Laura; Fitzpatrick, Patrick J; Arnone, Robert A; Mickle, Paul F; Cressman, Kimberly

2018-02-01

Harmful Algal Blooms (HABs) of Karenia brevis have been documented along coastal waters of every state bordering the Gulf of Mexico (GoM). Some Gulf Coast locations, such as Florida and Texas, suffer from recurrent intense and spatially large blooms, while others such as Mississippi seem to rarely observe them. The main objective of this work is to understand the dynamics that led to the K. brevis bloom in Mississippi coastal waters in fall 2015. Blooms of K. brevis from the Florida Panhandle region are often advected westward towards the Mississippi-Alabama coast; however there is interannual variability in their presence and intensity in Mississippi coastal waters. The 2015 K. brevis bloom was compared to the 2007 Florida Panhandle K. brevis bloom, which showed a westward advection pattern, but did not intensify along the Mississippi coast. Cell counts and flow cytometry were obtained from the Mississippi Department of Marine Resources, Alabama Department of Public Health, Florida Fish and Wildlife Conservation Commission and The University of Southern Mississippi. Ocean color satellite imagery from the Moderate Resolution Imaging Spectroradiometer onboard the Aqua satellite was used to detect and delineate the blooms in 2007 and 2015. Two different regional applications of NCOM-Navy Coastal Ocean Model (1-km resolution NCOM-GoM/Gulf of Mexico and 6-km resolution NCOM-IASNFS/Intra Americas Sea Nowcast Forecast System) were used to understand the circulation and transport pathways. A Lagrangian particle tracking software was used to track the passive movement of particles released at different locations for both bloom events. Ancillary data (e.g., nutrients, wind, salinity, river discharge) from local buoys, monitoring stations and coincident oceanographic cruises were also included in the analysis. The blooms of K. brevis reached the Mississippi coast both years; however, the bloom in 2007 lasted only a few days and there is no evidence that it entered the Mississippi Sound. Two major differences were observed between both years. First, circulation patterns in 2015 resulting from an intense westward-northwestward that persisted until December allowed for continuous advection, whereas this pattern was not evident in 2007. Second, local river discharge was elevated throughout late fall 2015 while 2007 was below the average. Thus, elevated discharge may have provided sufficient nutrients for bloom intensification. These results illustrate the complex, but important interactions in coastal zones. Further, they emphasize the importance in establishing comprehensive HAB monitoring programs, which facilitate our understanding of nutrient and phytoplankton dynamics, and stress the importance for multi-agency cooperation across state boundaries. Copyright © 2017 Elsevier B.V. All rights reserved.

iPTF16fnl: A Faint and Fast Tidal Disruption Event in an E+A Galaxy

DOE PAGES

Blagorodnova, N.; Gezari, S.; Hung, T.; ...

2017-07-20

Here, we present ground-based and Swift observations of iPTF16fnl, a likely tidal disruption event (TDE) discovered by the intermediate Palomar Transient Factory (iPTF) survey at 66.6 Mpc. The light curve of the object peaked at an absolute magmore » $${M}_{g}=-17.2$$. The maximum bolometric luminosity (from optical and UV) was $${L}_{p}\\simeq (1.0\\pm 0.15)\\times {10}^{43}$$ erg s -1, an order of magnitude fainter than any other optical TDE discovered so far. The luminosity in the first 60 days is consistent with an exponential decay, with $$L\\propto {e}^{-(t-{t}_{0})/\\tau }$$, where t 0 = 57631.0 (MJD) and $$\\tau \\simeq 15$$ days. The X-ray shows a marginal detection at $${L}_{X}={2.4}_{-1.1}^{1.9}\\times {10}^{39}$$ erg s -1 (Swift X-ray Telescope). No radio counterpart was detected down to 3σ, providing upper limits for monochromatic radio luminosities of $${\

iPTF16fnl: A Faint and Fast Tidal Disruption Event in an E+A Galaxy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Blagorodnova, N.; Gezari, S.; Hung, T.

Here, we present ground-based and Swift observations of iPTF16fnl, a likely tidal disruption event (TDE) discovered by the intermediate Palomar Transient Factory (iPTF) survey at 66.6 Mpc. The light curve of the object peaked at an absolute magmore » $${M}_{g}=-17.2$$. The maximum bolometric luminosity (from optical and UV) was $${L}_{p}\\simeq (1.0\\pm 0.15)\\times {10}^{43}$$ erg s -1, an order of magnitude fainter than any other optical TDE discovered so far. The luminosity in the first 60 days is consistent with an exponential decay, with $$L\\propto {e}^{-(t-{t}_{0})/\\tau }$$, where t 0 = 57631.0 (MJD) and $$\\tau \\simeq 15$$ days. The X-ray shows a marginal detection at $${L}_{X}={2.4}_{-1.1}^{1.9}\\times {10}^{39}$$ erg s -1 (Swift X-ray Telescope). No radio counterpart was detected down to 3σ, providing upper limits for monochromatic radio luminosities of $${\

VizieR Online Data Catalog: Imaging observations of iPTF 13ajg (Vreeswijk+, 2014)

NASA Astrophysics Data System (ADS)

Vreeswijk, P. M.; Savaglio, S.; Gal-Yam, A.; De Cia, A.; Quimby, R. M.; Sullivan, M.; Cenko, S. B.; Perley, D. A.; Filippenko, A. V.; Clubb, K. I.; Taddia, F.; Sollerman, J.; Leloudas, G.; Arcavi, I.; Rubin, A.; Kasliwal, M. M.; Cao, Y.; Yaron, O.; Tal, D.; Ofek, E. O.; Capone, J.; Kutyrev, A. S.; Toy, V.; Nugent, P. E.; Laher, R.; Surace, J.; Kulkarni, S. R.

2017-08-01

iPTF 13ajg was imaged with the Palomar 48 inch (P48) Oschin iPTF survey telescope equipped with a 12kx8k CCD mosaic camera (Rahmer et al. 2008SPIE.7014E..4YR) in the Mould R filter, the Palomar 60 inch and CCD camera (Cenko et al. 2006PASP..118.1396C) in Johnson B and Sloan Digital Sky Survey (SDSS) gri, the 2.56 m Nordic Optical Telescope (on La Palma, Canary Islands) with the Andalucia Faint Object Spectrograph and Camera (ALFOSC) in SDSS ugriz, the 4.3 m Discovery Channel Telescope (at Lowell Observatory, Arizona) with the Large Monolithic Imager (LMI) in SDSS r, and with LRIS (Oke et al. 1995PASP..107..375O) and the Multi-Object Spectrometer for Infrared Exploration (MOSFIRE; McLean et al. 2012SPIE.8446E..0JM), both mounted on the 10 m Keck-I telescope (on Mauna Kea, Hawaii), in g and Rs with LRIS and J and Ks with MOSFIRE. (1 data file).

EVIDENCE FOR A COMPACT WOLF-RAYET PROGENITOR FOR THE TYPE Ic SUPERNOVA PTF 10vgv

DOE Office of Scientific and Technical Information (OSTI.GOV)

Corsi, A.; Ofek, E. O.; Gal-Yam, A.

We present the discovery of PTF 10vgv, a Type Ic supernova (SN) detected by the Palomar Transient Factory, using the Palomar 48 inch telescope (P48). R-band observations of the PTF 10vgv field with P48 probe the SN emission from its very early phases (about two weeks before R-band maximum) and set limits on its flux in the week prior to the discovery. Our sensitive upper limits and early detections constrain the post-shock-breakout luminosity of this event. Via comparison to numerical (analytical) models, we derive an upper-limit of R {approx}< 4.5 R{sub Sun} (R {approx}< 1 R{sub Sun }) on themore » radius of the progenitor star, a direct indication in favor of a compact Wolf-Rayet star. Applying a similar analysis to the historical observations of SN 1994I yields R {approx}< 1/4 R{sub Sun} for the progenitor radius of this SN.« less

Pulsational Pair-instability Model for Superluminous Supernova PTF12dam: Interaction and Radioactive Decay

NASA Astrophysics Data System (ADS)

Tolstov, Alexey; Nomoto, Ken'ichi; Blinnikov, Sergei; Sorokina, Elena; Quimby, Robert; Baklanov, Petr

2017-02-01

Being a superluminous supernova, PTF12dam can be explained by a 56Ni-powered model, a magnetar-powered model, or an interaction model. We propose that PTF12dam is a pulsational pair-instability supernova, where the outer envelope of a progenitor is ejected during the pulsations. Thus, it is powered by a double energy source: radioactive decay of 56Ni and a radiative shock in a dense circumstellar medium. To describe multicolor light curves and spectra, we use radiation-hydrodynamics calculations of the STELLA code. We found that light curves are well described in the model with 40 M⊙ ejecta and 20-40 M⊙ circumstellar medium. The ejected 56Ni mass is about 6 M⊙, which results from explosive nucleosynthesis with large explosion energy (2-3) × 1052 erg. In comparison with alternative scenarios of pair-instability supernova and magnetar-powered supernova, in the interaction model, all the observed main photometric characteristics are well reproduced: multicolor light curves, color temperatures, and photospheric velocities.

Strong late-time circumstellar interaction in the peculiar supernova iPTF14hls

NASA Astrophysics Data System (ADS)

Andrews, Jennifer E.; Smith, Nathan

2018-06-01

We present a moderate-resolution spectrum of the peculiar Type II supernova (SN) iPTF14hls taken on day 1153 after discovery. This spectrum reveals the clear signature of shock interaction with dense circumstellar material (CSM). We suggest that this CSM interaction may be an important clue for understanding the extremely unusual photometric and spectroscopic evolution seen over the first 600 d of iPTF14hls. The late-time spectrum shows a double-peaked intermediate-width H α line indicative of expansion speeds around 1000 km s-1, with the double-peaked shape hinting at a disc-like geometry in the CSM. If the CSM were highly asymmetric, perhaps in a disc or torus that was ejected from the star 3-6 yr prior to explosion, the CSM interaction could have been overrun and hidden below the SN ejecta photosphere from a wide range of viewing angles. In that case, CSM interaction luminosity would have been thermalized well below the photosphere, potentially sustaining the high luminosity without exhibiting the traditional observational signatures of strong CSM interaction (narrow H α emission and X-rays). Variations in density structure of the CSM could account for the multiple rebrightenings of the light curve. We propose that a canonical 1 × 1051 erg explosion energy with enveloped CSM interaction as seen in some recent SNe, rather than an entirely new explosion mechanism, may be adequate to explain the peculiar evolution of iPTF14hls.

Identifying Microlensing Events in Large, Non-Uniformly Sampled Surveys: The Case of the Palomar Transient Factory

NASA Astrophysics Data System (ADS)

Price-Whelan, Adrian M.; Agueros, M. A.; Fournier, A.; Street, R.; Ofek, E.; Levitan, D. B.; PTF Collaboration

2013-01-01

Many current photometric, time-domain surveys are driven by specific goals such as searches for supernovae or transiting exoplanets, or studies of stellar variability. These goals in turn set the cadence with which individual fields are re-imaged. In the case of the Palomar Transient Factory (PTF), several such sub-surveys are being conducted in parallel, leading to extremely non-uniform sampling over the survey's nearly 20,000 sq. deg. footprint. While the typical 7.26 sq. deg. PTF field has been imaged 20 times in R-band, ~2300 sq. deg. have been observed more than 100 times. We use the existing PTF data 6.4x107 light curves) to study the trade-off that occurs when searching for microlensing events when one has access to a large survey footprint with irregular sampling. To examine the probability that microlensing events can be recovered in these data, we also test previous statistics used on uniformly sampled data to identify variables and transients. We find that one such statistic, the von Neumann ratio, performs best for identifying simulated microlensing events. We develop a selection method using this statistic and apply it to data from all PTF fields with >100 observations to uncover a number of interesting candidate events. This work can help constrain all-sky event rate predictions and tests microlensing signal recovery in large datasets, both of which will be useful to future wide-field, time-domain surveys such as the LSST.

Discovery, Progenitor and Early Evolution of a Stripped Envelope Supernova iPTF13bvn

NASA Astrophysics Data System (ADS)

Cao, Yi; Kasliwal, Mansi M.; Arcavi, Iair; Horesh, Assaf; Hancock, Paul; Valenti, Stefano; Cenko, S. Bradley; Kulkarni, S. R.; Gal-Yam, Avishay; Gorbikov, Evgeny; Ofek, Eran O.; Sand, David; Yaron, Ofer; Graham, Melissa; Silverman, Jeffrey M.; Wheeler, J. Craig; Marion, G. H.; Walker, Emma S.; Mazzali, Paolo; Howell, D. Andrew; Li, K. L.; Kong, A. K. H.; Bloom, Joshua S.; Nugent, Peter E.; Surace, Jason; Masci, Frank; Carpenter, John; Degenaar, Nathalie; Gelino, Christopher R.

2013-09-01

The intermediate Palomar Transient Factory reports our discovery of a young supernova, iPTF13bvn, in the nearby galaxy, NGC 5806 (22.5 Mpc). Our spectral sequence in the optical and infrared suggests a Type Ib classification. We identify a blue progenitor candidate in deep pre-explosion imaging within a 2σ error circle of 80 mas (8.7 pc). The candidate has an MB luminosity of -5.52 ± 0.39 mag and a B - I color of 0.25 ± 0.25 mag. If confirmed by future observations, this would be the first direct detection for a progenitor of a Type Ib. Fitting a power law to the early light curve, we find an extrapolated explosion date around 0.6 days before our first detection. We see no evidence of shock cooling. The pre-explosion detection limits constrain the radius of the progenitor to be smaller than a few solar radii. iPTF13bvn is also detected in centimeter and millimeter wavelengths. Fitting a synchrotron self-absorption model to our radio data, we find a mass-loading parameter of 1.3×1012 g cm-1. Assuming a wind velocity of 103 km s-1, we derive a progenitor mass-loss rate of 3 × 10-5 M ⊙ yr-1. Our observations, taken as a whole, are consistent with a Wolf-Rayet progenitor of the supernova iPTF13bvn.

The Rise and Fall of the Type Ib Supernova iPTF13bvn Not a Massive Wolf-Rayet Star

NASA Technical Reports Server (NTRS)

Fremling, C.; Sollerman, J.; Taddia, F.; Ergon, M.; Valenti, S.; Arcavi, I.; Ben-Ami, S.; Cao, Y.; Cenko, S. B.; Filippenko, A. V.;

The bumpy light curve of Type IIn supernova iPTF13z over 3 years

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nyholm, A.; Sollerman, J.; Taddia, F.

A core-collapse (CC) supernova (SN) of Type IIn is dominated by the interaction of SN ejecta with the circumstellar medium (CSM). Some SNe IIn (e.g. SN 2006jd) have episodes of re-brightening ("bumps") in their light curves. We present iPTF13z, a Type IIn SN discovered on 2013 February 1 by the intermediate Palomar Transient Factory (iPTF). This SN showed at least five bumps in its declining light curve between 130 and 750 days after discovery. We analyse this peculiar behaviour and try to infer the properties of the CSM, of the SN explosion, and the nature of the progenitor star. Wemore » obtained multi-band optical photometry for over 1000 days after discovery with the P48 and P60 telescopes at Palomar Observatory. We obtained low-resolution optical spectra during the same period. We did an archival search for progenitor outbursts. We analyse the photometry and the spectra, and compare iPTF13z to other SNe IIn. In particular we derive absolute magnitudes, colours, a pseudo-bolometric light curve, and the velocities of the different components of the spectral lines. A simple analytical model is used to estimate the properties of the CSM. iPTF13z had a light curve peaking at M r ≤ 18.3 mag. The five bumps during its decline phase had amplitudes ranging from 0.4 to 0.9 mag and durations between 20 and 120 days. The most prominent bumps appeared in all the different optical bands, when covered. The spectra of this SN showed typical SN IIn characteristics, with emission lines of Hα (with broad component FWHM ~ 10 3 - 10 4 km s -1 and narrow component FWHM ~ 10 2 km s -1 ) and He i, but also with Fe ii, Ca ii, Na i D and Hβ P Cygni profiles (with velocities of ~ 10 3 km s -1). A pre-explosion outburst was identified lasting ≳ 50 days, with M r ≤ 15 mag around 210 days before discovery. Large, variable progenitor mass-loss rates (≳ 0.01M ⊙ yr -1) and CSM densities (10 -16 g cm -3) are derived. The SN was hosted by a metal-poor dwarf galaxy at redshift z = 0.0328. We suggest that the light curve bumps of iPTF13z arose from SN ejecta interacting with denser regions in the CSM, possibly produced by the eruptions of a luminous blue variable progenitor star.« less

Language Classification using N-grams Accelerated by FPGA-based Bloom Filters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jacob, A; Gokhale, M

N-Gram (n-character sequences in text documents) counting is a well-established technique used in classifying the language of text in a document. In this paper, n-gram processing is accelerated through the use of reconfigurable hardware on the XtremeData XD1000 system. Our design employs parallelism at multiple levels, with parallel Bloom Filters accessing on-chip RAM, parallel language classifiers, and parallel document processing. In contrast to another hardware implementation (HAIL algorithm) that uses off-chip SRAM for lookup, our highly scalable implementation uses only on-chip memory blocks. Our implementation of end-to-end language classification runs at 85x comparable software and 1.45x the competing hardware design.

Acoustic charge transport technology investigation for advanced development transponder

NASA Technical Reports Server (NTRS)

Kayalar, S.

1993-01-01

Acoustic charge transport (ACT) technology has provided a basis for a new family of analog signal processors, including a programmable transversal filter (PTF). Through monolithic integration of ACT delay lines with GaAs metal semiconductor field effect transistor (MESFET) digital memory and controllers, these devices significantly extend the performance of PTF's. This article introduces the basic operation of these devices and summarizes their present and future specifications. The production and testing of these devices indicate that this new technology is a promising one for future space applications.

A Quasar Turns On

NASA Astrophysics Data System (ADS)

Kohler, Susanna

2017-02-01

The intermediate Palomar Transient Factory (iPTF) has discovered a quasar the brightly-shining, active nucleus of a galaxy abruptly turning on in what appears to be the fastest such transition ever seen in such an object.A Rapid TransitionQuasars are expected to show variations in brightness on timescales of hours to millions of years, but its not often that we get to study their major variability in real time! So far, weve discovered only a dozen changing-look quasars active galactic nuclei that exhibit major changes in their spectral class and brightness between observations. Roughly half of these were quasars that turned on and half were quasars that turned off, generally on timescales of maybe 5 or 10 years.The dramatic change in spectrum of iPTF 16bco between the archival SDSS data from 2004 (bottom) and the follow-up spectroscopy from Keck 2+DEIMOS in 2016 (top). [Adapted from Gezari et al. 2017]In June 2016, however, a team of scientists led by Suvi Gezari (University of Maryland) discovered iPTF 16bco, a nuclear transient that wasnt there the last time Palomar checked in 2012. A search through archival Sloan Digital Sky Survey and GALEX data in addition to some follow-up X-ray imaging and spectroscopic observations told the team what they needed to know: iPTF 16bco is a quasar that only just turned on within the 500 days preceding the iPTF observations.This source, in fact, is a 100-million-solar-mass black hole located at the center of a galaxy at a redshift of z= 0.237. In just over a year, the source changed classification from a galaxy with weak narrow-line emission to a quasar with characteristic strong, broad emission lines and a ten-fold increase in continuum brightness! What caused this sudden transition?Instabilities at Fault?iPTF 16bco and the other known changing-look quasars with disappearing (red circles) and appearing (blue circles) broad-line emission. [Adapted from Gezari et al. 2017]Gezari and collaborators used the large number of recent and archival observations of the galaxy to explore several scenarios that might be responsible for the rapid change in its brightness and spectral appearance. They found that the data disfavor variable obscuration by an absorber between us and the galaxy, microlensing of a background object, and tidal disruption of a star.Instead, the authors conclude that the best-fitting explanation is one in which thegalaxys nucleus already had a preexisting accretion disk, but the disk recently developed an instability. That instability caused more gas to rapidly feed onto the black hole, bumping the accretion rate up a notch and resulting in the quasar suddenlybrightening.Continued observations ofiPTF 16bcowill certainly help us to better understand whats happening in this unusual source. In the meantime, itsrapid change of state pushes the limits of accretion disk theory and presents us with an intriguing challenge to our understanding of quasars.CitationS. Gezari et al 2017 ApJ 835 144. doi:10.3847/1538-4357/835/2/144

iPTF15dtg: a double-peaked Type Ic supernova from a massive progenitor

DOE PAGES

Taddia, Francesco; Fremling, C.; Sollerman, J.; ...

2016-08-04

Type Ic supernovae (SNe Ic) arise from the core-collapse of H- (and He-) poor stars, which could either be single Wolf-Rayet (WR) stars or lower-mass stars stripped of their envelope by a companion. Their light curves are radioactively powered and usually show a fast rise to peak (~10-15 d), without any early (in the first few days) emission bumps (with the exception of broad-lined SNe Ic) as sometimes seen for other types of stripped-envelope SNe (e.g., Type IIb SN 1993J and Type Ib SN 2008D). Here, we have studied iPTF15dtg, a spectroscopically normal SN Ic with an early excess inmore » the optical light curves followed by a long (~30 d) rise to the main peak. It is the first spectroscopically-normal double-peaked SN Ic to be observed. Our aim is to determine the properties of this explosion and of its progenitor star. Methods. Optical photometry and spectroscopy of iPTF15dtg was obtained with multiple telescopes. The resulting light curves and spectral sequence are analyzed and modeled with hydrodynamical and analytical models, with particular focus on the early emission. iPTF15dtg is a slow rising SN Ic, similar to SN 2011bm. Hydrodynamical modeling of the bolometric properties reveals a large ejecta mass (~10 M ⊙) and strong 56Ni mixing. The luminous early emission can be reproduced if we account for the presence of an extended (≳500 R ⊙), low-mass (≳0.045 M ⊙) envelope around the progenitor star. Alternative scenarios for the early peak, such as the interaction with a companion, a shock-breakout (SBO) cooling tail from the progenitor surface, or a magnetar-driven SBO are not favored. In conclusion, the large ejecta mass and the presence of H- and He-free extended material around the star suggest that the progenitor of iPTF15dtg was a massive (≳35 M ⊙) WR star that experienced strong mass loss.« less

Absence of Fast-Moving Iron in an Intermediate Type Ia Supernova Between Normal and Super-Chandrasekhar

DOE PAGES

Cao, Yi; Johansson, J.; Nugent, Peter E.; ...

2016-06-01

In this study, we report observations of a peculiar SN Ia iPTF13asv (a.k.a., SN2013cv) from the onset of the explosion to months after its peak. The early-phase spectra of iPTF13asv show an absence of iron absorption, indicating that synthesized iron elements are confined to low-velocity regions of the ejecta, which, in turn, implies a stratified ejecta structure along the line of sight. Our analysis of iPTF13asv's light curves and spectra shows that it is an intermediate case between normal and super-Chandrasekhar events. On the one hand, its light curve shape (B-bandmore » $${\\rm{\\Delta }}{m}_{15}=1.03\\pm 0.01$$) and overall spectral features resemble those of normal SNe Ia. On the other hand, its large peak optical and UV luminosity ($${M}_{B}=-19.84\\;{\\rm{mag}}$$, $${M}_{{uvm}2}=-15.5\\;{\\rm{mag}}$$) and its low but almost constant Si ii velocities of about 10,000 km s -1 are similar to those in super-Chandrasekhar events, and its persistent carbon signatures in the spectra are weaker than those seen commonly in super-Chandrasekhar events. We estimate a 56Ni mass of $${0.81}_{-0.18}^{+0.10}{M}_{\\odot }$$ and a total ejecta mass of $${1.59}_{-0.12}^{+0.45}{M}_{\\odot }$$. Finally, the large ejecta mass of iPTF13asv and its stratified ejecta structure together seemingly favor a double-degenerate origin.« less

A simple hand‐held magnet array for efficient and reproducible SABRE hyperpolarisation using manual sample shaking

PubMed Central

Richardson, Peter M.; Jackson, Scott; Parrott, Andrew J.; Nordon, Alison; Duckett, Simon B.

2018-01-01

Signal amplification by reversible exchange (SABRE) is a hyperpolarisation technique that catalytically transfers nuclear polarisation from parahydrogen, the singlet nuclear isomer of H2, to a substrate in solution. The SABRE exchange reaction is carried out in a polarisation transfer field (PTF) of tens of gauss before transfer to a stronger magnetic field for nuclear magnetic resonance (NMR) detection. In the simplest implementation, polarisation transfer is achieved by shaking the sample in the stray field of a superconducting NMR magnet. Although convenient, this method suffers from limited reproducibility and cannot be used with NMR spectrometers that do not have appreciable stray fields, such as benchtop instruments. Here, we use a simple hand‐held permanent magnet array to provide the necessary PTF during sample shaking. We find that the use of this array provides a 25% increase in SABRE enhancement over the stray field approach, while also providing improved reproducibility. Arrays with a range of PTFs were tested, and the PTF‐dependent SABRE enhancements were found to be in excellent agreement with comparable experiments carried out using an automated flow system where an electromagnet is used to generate the PTF. We anticipate that this approach will improve the efficiency and reproducibility of SABRE experiments carried out using manual shaking and will be particularly useful for benchtop NMR, where a suitable stray field is not readily accessible. The ability to construct arrays with a range of PTFs will also enable the rapid optimisation of SABRE enhancement as function of PTF for new substrate and catalyst systems. PMID:29193324

Quality Assurance Model for Digital Adult Education Materials

ERIC Educational Resources Information Center

Dimou, Helen; Kameas, Achilles

2016-01-01

Purpose: This paper aims to present a model for the quality assurance of digital educational material that is appropriate for adult education. The proposed model adopts the software quality standard ISO/IEC 9126 and takes into account adult learning theories, Bloom's taxonomy of learning objectives and two instructional design models: Kolb's model…

Pulsational Pair-instability Model for Superluminous Supernova PTF12dam:Interaction and Radioactive Decay

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tolstov, Alexey; Nomoto, Ken’ichi; Blinnikov, Sergei

2017-02-01

Being a superluminous supernova, PTF12dam can be explained by a {sup 56}Ni-powered model, a magnetar-powered model, or an interaction model. We propose that PTF12dam is a pulsational pair-instability supernova, where the outer envelope of a progenitor is ejected during the pulsations. Thus, it is powered by a double energy source: radioactive decay of {sup 56}Ni and a radiative shock in a dense circumstellar medium. To describe multicolor light curves and spectra, we use radiation-hydrodynamics calculations of the STELLA code. We found that light curves are well described in the model with 40 M {sub ⊙} ejecta and 20–40 M {submore » ⊙} circumstellar medium. The ejected {sup 56}Ni mass is about 6 M {sub ⊙}, which results from explosive nucleosynthesis with large explosion energy (2–3)×10{sup 52} erg. In comparison with alternative scenarios of pair-instability supernova and magnetar-powered supernova, in the interaction model, all the observed main photometric characteristics are well reproduced: multicolor light curves, color temperatures, and photospheric velocities.« less

Krüppel-like Factor 5, Increased in Pancreatic Ductal Adenocarcinoma, Promotes Proliferation, Acinar-to-Ductal Metaplasia, Pancreatic Intraepithelial Neoplasia, and Tumor Growth in Mice.

PubMed

He, Ping; Yang, Jong Won; Yang, Vincent W; Bialkowska, Agnieszka B

2018-04-01

Activating mutations in KRAS are detected in most pancreatic ductal adenocarcinomas (PDACs). Expression of an activated form of KRAS (KrasG12D) in pancreata of mice is sufficient to induce formation of pancreatic intraepithelial neoplasia (PanINs)-a precursor of PDAC. Pancreatitis increases formation of PanINs in mice that express KrasG12D by promoting acinar-to-ductal metaplasia (ADM). We investigated the role of the transcription factor Krüppel-like factor 5 (KLF5) in ADM and KRAS-mediated formation of PanINs. We performed studies in adult mice with conditional disruption of Klf5 (Klf5 fl/fl ) and/or expression of Kras G12D (LSL-Kras G12D ) via Cre ERTM recombinase regulated by an acinar cell-specific promoter (Ptf1a). Activation of Kras G12D and loss of KLF5 was achieved by administration of tamoxifen. Pancreatitis was induced in mice by administration of cerulein; pancreatic tissues were collected, analyzed by histology and immunohistochemistry, and transcriptomes were compared between mice that did or did not express KLF5. We performed immunohistochemical analyses of human tissue microarrays, comparing levels of KLF5 among 96 human samples of PDAC. UN-KC-6141 cells (pancreatic cancer cells derived from Pdx1-Cre;LSL-Kras G12D mice) were incubated with inhibitors of different kinases and analyzed in proliferation assays and by immunoblots. Expression of KLF5 was knocked down with small hairpin RNAs or CRISPR/Cas9 strategies; cells were analyzed in proliferation and gene expression assays, and compared with cells expressing control vectors. Cells were subcutaneously injected into flanks of syngeneic mice and tumor growth was assessed. Of the 96 PDAC samples analyzed, 73% were positive for KLF5 (defined as nuclear staining in more than 5% of tumor cells). Pancreata from Ptf1a-Cre ERTM ;LSL-Kras G12D mice contained ADM and PanIN lesions, which contained high levels of nuclear KLF5 within these structures. In contrast, Ptf1a-Cre ERTM ;LSL-Kras G12D ;Klf5 fl/fl mice formed fewer PanINs. After cerulein administration, Ptf1a-Cre ERTM ;LSL-Kras G12D mice formed more extensive ADM than Ptf1a-Cre ERTM ;LSL-Kras G12D ;Klf5 fl/fl mice. Pancreata from Ptf1a-Cre ERTM ;LSL-Kras G12D ;Klf5 fl/fl mice had increased expression of the tumor suppressor NDRG2 and reduced phosphorylation (activation) of STAT3, compared with Ptf1a-Cre ERTM ;LSL-Kras G12D mice. In UN-KC-6141 cells, PI3K and MEK signaling increased expression of KLF5; a high level of KLF5 increased proliferation. Cells with knockdown of Klf5 had reduced proliferation, compared with control cells, had reduced expression of ductal markers, and formed smaller tumors (71.61 ± 30.79 mm 3 vs 121.44 ± 34.90 mm 3 from control cells) in flanks of mice. Levels of KLF5 are increased in human PDAC samples and in PanINs of Ptf1a-Cre ERTM ;LSL-Kras G12D mice, compared with controls. KLF5 disruption increases expression of NDRG2 and reduces activation of STAT3 and reduces ADM and PanINs formation in mice. Strategies to reduce KLF5 activity might reduce progression of acinar cells from ADM to PanIN and pancreatic tumorigenesis. Copyright © 2018 AGA Institute. Published by Elsevier Inc. All rights reserved.

The bumpy light curve of Type IIn supernova iPTF13z over 3 years

NASA Astrophysics Data System (ADS)

Nyholm, A.; Sollerman, J.; Taddia, F.; Fremling, C.; Moriya, T. J.; Ofek, E. O.; Gal-Yam, A.; De Cia, A.; Roy, R.; Kasliwal, M. M.; Cao, Y.; Nugent, P. E.; Masci, F. J.

2017-08-01

A core-collapse (CC) supernova (SN) of Type IIn is dominated by the interaction of SN ejecta with the circumstellar medium (CSM). Some SNe IIn (e.g. SN 2006jd) have episodes of re-brightening ("bumps") in their light curves. We present iPTF13z, a Type IIn SN discovered on 2013 February 1 by the intermediate Palomar Transient Factory (iPTF). This SN showed at least five bumps in its declining light curve between 130 and 750 days after discovery. We analyse this peculiar behaviour and try to infer the properties of the CSM, of the SN explosion, and the nature of the progenitor star. We obtained multi-band optical photometry for over 1000 days after discovery with the P48 and P60 telescopes at Palomar Observatory. We obtained low-resolution optical spectra during the same period. We did an archival search for progenitor outbursts. We analyse the photometry and the spectra, and compare iPTF13z to other SNe IIn. In particular we derive absolute magnitudes, colours, a pseudo-bolometric light curve, and the velocities of the different components of the spectral lines. A simple analytical model is used to estimate the properties of the CSM. iPTF13z had a light curve peaking at Mr ≲ - 18.3 mag. The five bumps during its decline phase had amplitudes ranging from 0.4 to 0.9 mag and durations between 20 and 120 days. The most prominent bumps appeared in all the different optical bands, when covered. The spectra of this SN showed typical SN IIn characteristics, with emission lines of Hα (with broad component FWHM 103 - 104 km s-1 and narrow component FWHM 102 km s-1) and He I, but also with Fe II, Ca II, Na I D and Hβ P Cygni profiles (with velocities of 103km s-1). A pre-explosion outburst was identified lasting ≳ 50 days, with Mr ≈ - 15 mag around 210 days before discovery. Large, variable progenitor mass-loss rates (≳0.01M⊙ yr-1) and CSM densities (≳10-16 g cm-3) are derived. The SN was hosted by a metal-poor dwarf galaxy at redshift z = 0.0328. We suggest that the light curve bumps of iPTF13z arose from SN ejecta interacting with denser regions in the CSM, possibly produced by the eruptions of a luminous blue variable progenitor star. Full Tables A.2, A.3 are only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/605/A6

Implementations of the CC'01 Human-Computer Interaction Guidelines Using Bloom's Taxonomy

ERIC Educational Resources Information Center

Manaris, Bill; Wainer, Michael; Kirkpatrick, Arthur E.; Stalvey, RoxAnn H.; Shannon, Christine; Leventhal, Laura; Barnes, Julie; Wright, John; Schafer, J. Ben; Sanders, Dean

2007-01-01

In today's technology-laden society human-computer interaction (HCI) is an important knowledge area for computer scientists and software engineers. This paper surveys existing approaches to incorporate HCI into computer science (CS) and such related issues as the perceived gap between the interests of the HCI community and the needs of CS…

iPTF Archival Search for Fast Optical Transients

NASA Astrophysics Data System (ADS)

Ho, Anna Y. Q.; Kulkarni, S. R.; Nugent, Peter E.; Zhao, Weijie; Rusu, Florin; Cenko, S. Bradley; Ravi, Vikram; Kasliwal, Mansi M.; Perley, Daniel A.; Adams, Scott M.; Bellm, Eric C.; Brady, Patrick; Fremling, Christoffer; Gal-Yam, Avishay; Kann, David Alexander; Kaplan, David; Laher, Russ R.; Masci, Frank; Ofek, Eran O.; Sollerman, Jesper; Urban, Alex

2018-02-01

There has been speculation about a class of relativistic explosions with an initial Lorentz factor Γinit smaller than that of classical gamma-ray bursts (GRBs). These “dirty fireballs” would lack prompt GRB emission but could be pursued via their optical afterglow, appearing as transients that fade overnight. Here we report a search for such transients (that fade by 5-σ in magnitude overnight) in four years of archival photometric data from the intermediate Palomar Transient Factory (iPTF). Our search criteria yielded 50 candidates. Of these, two were afterglows to GRBs that had been found in dedicated follow-up observations to triggers from the Fermi GRB Monitor. Another (iPTF14yb) was a GRB afterglow discovered serendipitously. Eight were spurious artifacts of reference image subtraction, and one was an asteroid. The remaining 38 candidates have red stellar counterparts in external catalogs. The photometric and spectroscopic properties of the counterparts identify these transients as strong flares from M dwarfs of spectral type M3–M7 at distances of d ≈ 0.15–2.1 kpc; three counterparts were already spectroscopically classified as late-type M stars. With iPTF14yb as the only confirmed relativistic outflow discovered independently of a high-energy trigger, we constrain the all-sky rate of transients that peak at m = 18 and fade by Δm = 2 mag in Δt = 3 hr to be 680 {{yr}}-1, with a 68% confidence interval of 119{--}2236 {{yr}}-1. This implies that the rate of visible dirty fireballs is at most comparable to that of the known population of long-duration GRBs.

PTF11kx: A Type Ia Supernova with Hydrogen Emission Persisting after 3.5 Years

DOE PAGES

Graham, M. L.; Harris, C. E.; Fox, O. D.; ...

2017-07-11

The optical transient PTF11kx exhibited both the characteristic spectral features of Type Ia supernovae (SNe Ia) and the signature of ejecta interacting with circumstellar material (CSM) containing hydrogen, indicating the presence of a nondegenerate companion. In this paper, we present an optical spectrum at 1342 days after peak from Keck Observatory, in which the broad component of Hα emission persists with a similar profile as in early-time observations. We also present Spitzer IRAC detections obtained 1237 and 1818 days after peak, and an upper limit from Hubble Space Telescope ultraviolet imaging at 2133 days. We interpret our late-time observations inmore » the context of published results—and reinterpret the early-time observations—in order to constrain the CSM's physical parameters and to compare to theoretical predictions for recurrent-nova systems. We find that the CSM's radial extent may be several times the distance between the star and the CSM's inner edge, and that the CSM column density may be two orders of magnitude lower than previous estimates. We show that the Hα luminosity decline is similar to other SNe with CSM interaction and demonstrate how our infrared photometry is evidence for newly formed, collisionally heated dust. We create a model for PTF11kx's late-time CSM interaction and find that X-ray reprocessing by photoionization and recombination cannot reproduce the observed Hα luminosity, suggesting that the X-rays are thermalized and that Hα radiates from collisional excitation. In conclusion, we discuss the implications of our results regarding the progenitor scenario and the geometric properties of the CSM for the PTF11kx system.« less

iPTF Archival Search for Fast Optical Transients

DOE PAGES

Ho, Anna Y. Q.; Kulkarni, S. R.; Nugent, Peter E.; ...

2018-02-09

There has been speculation about a class of relativistic explosions with an initial Lorentz factor Γ init smaller than that of classical gamma-ray bursts (GRBs). These "dirty fireballs" would lack prompt GRB emission but could be pursued via their optical afterglow, appearing as transients that fade overnight. We report a search for such transients (that fade by 5-σ in magnitude overnight) in four years of archival photometric data from the intermediate Palomar Transient Factory (iPTF). Our search criteria yielded 50 candidates. Of these, two were afterglows to GRBs that had been found in dedicated follow-up observations to triggers from themore » Fermi GRB Monitor. Another (iPTF14yb) was a GRB afterglow discovered serendipitously. Eight were spurious artifacts of reference image subtraction, and one was an asteroid. The remaining 38 candidates have red stellar counterparts in external catalogs. The photometric and spectroscopic properties of the counterparts identify these transients as strong flares from M dwarfs of spectral type M3-M7 at distances of d ≈ 0.15-2.1 kpc; three counterparts were already spectroscopically classified as late-type M stars. With iPTF14yb as the only confirmed relativistic outflow discovered independently of a high-energy trigger, we constrain the all-sky rate of transients that peak at m = 18 and fade by Δm = 2 mag in Δt = 3 hr to be 680 yr -1, with a 68% confidence interval of 1119-2236 yr -1. This implies that the rate of visible dirty fireballs is at most comparable to that of the known population of long-duration GRBs.« less

The Detection Rate of Early UV Emission from Supernovae: A Dedicated Galex/PTF Survey and Calibrated Theoretical Estimates

NASA Astrophysics Data System (ADS)

Ganot, Noam; Gal-Yam, Avishay; Ofek, Eran. O.; Sagiv, Ilan; Waxman, Eli; Lapid, Ofer; Kulkarni, Shrinivas R.; Ben-Ami, Sagi; Kasliwal, Mansi M.; The ULTRASAT Science Team; Chelouche, Doron; Rafter, Stephen; Behar, Ehud; Laor, Ari; Poznanski, Dovi; Nakar, Ehud; Maoz, Dan; Trakhtenbrot, Benny; WTTH Consortium, The; Neill, James D.; Barlow, Thomas A.; Martin, Christofer D.; Gezari, Suvi; the GALEX Science Team; Arcavi, Iair; Bloom, Joshua S.; Nugent, Peter E.; Sullivan, Mark; Palomar Transient Factory, The

2016-03-01

The radius and surface composition of an exploding massive star, as well as the explosion energy per unit mass, can be measured using early UV observations of core-collapse supernovae (SNe). We present the first results from a simultaneous GALEX/PTF search for early ultraviolet (UV) emission from SNe. Six SNe II and one Type II superluminous SN (SLSN-II) are clearly detected in the GALEX near-UV (NUV) data. We compare our detection rate with theoretical estimates based on early, shock-cooling UV light curves calculated from models that fit existing Swift and GALEX observations well, combined with volumetric SN rates. We find that our observations are in good agreement with calculated rates assuming that red supergiants (RSGs) explode with fiducial radii of 500 R ⊙, explosion energies of 1051 erg, and ejecta masses of 10 M ⊙. Exploding blue supergiants and Wolf-Rayet stars are poorly constrained. We describe how such observations can be used to derive the progenitor radius, surface composition, and explosion energy per unit mass of such SN events, and we demonstrate why UV observations are critical for such measurements. We use the fiducial RSG parameters to estimate the detection rate of SNe during the shock-cooling phase (<1 day after explosion) for several ground-based surveys (PTF, ZTF, and LSST). We show that the proposed wide-field UV explorer ULTRASAT mission is expected to find >85 SNe per year (˜0.5 SN per deg2), independent of host galaxy extinction, down to an NUV detection limit of 21.5 mag AB. Our pilot GALEX/PTF project thus convincingly demonstrates that a dedicated, systematic SN survey at the NUV band is a compelling method to study how massive stars end their life.

Uncertainty in predicting soil hydraulic properties at the hillslope scale with indirect methods

NASA Astrophysics Data System (ADS)

Chirico, G. B.; Medina, H.; Romano, N.

2007-02-01

SummarySeveral hydrological applications require the characterisation of the soil hydraulic properties at large spatial scales. Pedotransfer functions (PTFs) are being developed as simplified methods to estimate soil hydraulic properties as an alternative to direct measurements, which are unfeasible for most practical circumstances. The objective of this study is to quantify the uncertainty in PTFs spatial predictions at the hillslope scale as related to the sampling density, due to: (i) the error in estimated soil physico-chemical properties and (ii) PTF model error. The analysis is carried out on a 2-km-long experimental hillslope in South Italy. The method adopted is based on a stochastic generation of patterns of soil variables using sequential Gaussian simulation, conditioned to the observed sample data. The following PTFs are applied: Vereecken's PTF [Vereecken, H., Diels, J., van Orshoven, J., Feyen, J., Bouma, J., 1992. Functional evaluation of pedotransfer functions for the estimation of soil hydraulic properties. Soil Sci. Soc. Am. J. 56, 1371-1378] and HYPRES PTF [Wösten, J.H.M., Lilly, A., Nemes, A., Le Bas, C., 1999. Development and use of a database of hydraulic properties of European soils. Geoderma 90, 169-185]. The two PTFs estimate reliably the soil water retention characteristic even for a relatively coarse sampling resolution, with prediction uncertainties comparable to the uncertainties in direct laboratory or field measurements. The uncertainty of soil water retention prediction due to the model error is as much as or more significant than the uncertainty associated with the estimated input, even for a relatively coarse sampling resolution. Prediction uncertainties are much more important when PTF are applied to estimate the saturated hydraulic conductivity. In this case model error dominates the overall prediction uncertainties, making negligible the effect of the input error.

Statistical Searches for Microlensing Events in Large, Non-uniformly Sampled Time-Domain Surveys: A Test Using Palomar Transient Factory Data

NASA Astrophysics Data System (ADS)

Price-Whelan, Adrian M.; Agüeros, Marcel A.; Fournier, Amanda P.; Street, Rachel; Ofek, Eran O.; Covey, Kevin R.; Levitan, David; Laher, Russ R.; Sesar, Branimir; Surace, Jason

2014-01-01

Many photometric time-domain surveys are driven by specific goals, such as searches for supernovae or transiting exoplanets, which set the cadence with which fields are re-imaged. In the case of the Palomar Transient Factory (PTF), several sub-surveys are conducted in parallel, leading to non-uniform sampling over its ~20,000 deg2 footprint. While the median 7.26 deg2 PTF field has been imaged ~40 times in the R band, ~2300 deg2 have been observed >100 times. We use PTF data to study the trade off between searching for microlensing events in a survey whose footprint is much larger than that of typical microlensing searches, but with far-from-optimal time sampling. To examine the probability that microlensing events can be recovered in these data, we test statistics used on uniformly sampled data to identify variables and transients. We find that the von Neumann ratio performs best for identifying simulated microlensing events in our data. We develop a selection method using this statistic and apply it to data from fields with >10 R-band observations, 1.1 × 109 light curves, uncovering three candidate microlensing events. We lack simultaneous, multi-color photometry to confirm these as microlensing events. However, their number is consistent with predictions for the event rate in the PTF footprint over the survey's three years of operations, as estimated from near-field microlensing models. This work can help constrain all-sky event rate predictions and tests microlensing signal recovery in large data sets, which will be useful to future time-domain surveys, such as that planned with the Large Synoptic Survey Telescope.

PTF11kx: A Type Ia Supernova with Hydrogen Emission Persisting after 3.5 Years

DOE Office of Scientific and Technical Information (OSTI.GOV)

Graham, M. L.; Harris, C. E.; Fox, O. D.

The optical transient PTF11kx exhibited both the characteristic spectral features of Type Ia supernovae (SNe Ia) and the signature of ejecta interacting with circumstellar material (CSM) containing hydrogen, indicating the presence of a nondegenerate companion. In this paper, we present an optical spectrum at 1342 days after peak from Keck Observatory, in which the broad component of Hα emission persists with a similar profile as in early-time observations. We also present Spitzer IRAC detections obtained 1237 and 1818 days after peak, and an upper limit from Hubble Space Telescope ultraviolet imaging at 2133 days. We interpret our late-time observations inmore » the context of published results—and reinterpret the early-time observations—in order to constrain the CSM's physical parameters and to compare to theoretical predictions for recurrent-nova systems. We find that the CSM's radial extent may be several times the distance between the star and the CSM's inner edge, and that the CSM column density may be two orders of magnitude lower than previous estimates. We show that the Hα luminosity decline is similar to other SNe with CSM interaction and demonstrate how our infrared photometry is evidence for newly formed, collisionally heated dust. We create a model for PTF11kx's late-time CSM interaction and find that X-ray reprocessing by photoionization and recombination cannot reproduce the observed Hα luminosity, suggesting that the X-rays are thermalized and that Hα radiates from collisional excitation. In conclusion, we discuss the implications of our results regarding the progenitor scenario and the geometric properties of the CSM for the PTF11kx system.« less

Optical Follow-Up Observations of PTF10qts, a Luminous Broad-Lined Type Ic Supernova Found by the Palomar Transient Factory

NASA Technical Reports Server (NTRS)

Walker, E. S.; Mazzali, P. A.; Pian, E.; Hurley, K.; Arcavi, I.; Cenko, S. B.; Gal-Yam, A.; Horesh, A.; Kasliwal, M.; Poznanski, D.;

Modeling The Atmosphere In The Era Of Big Data From Extremely Wide Field-Of-View Telescopes

NASA Astrophysics Data System (ADS)

Gonzalez Quiles, Junellie; Nordin, Jakob

2018-01-01

Surveys like the Sloan Digital Sky Survey (SDSS), Pan-STARRS and the Palomar Transient Factory Survey (PTF) receive large amounts of data, which need to be processed and calibrated in order to correct for various factors. One of the limiting factors in obtaining high quality data is the atmosphere, and it is therefore essential to find the appropriate calibration for the atmospheric extinction. It is to be expected that a physical atmospheric model, compared to a photometric calibration used currently by PTF, is more effective in calibrating for the atmospheric extinction due to its ability to account for rapid atmospheric fluctuation and objects of different colors. We focused on creating tools to model the atmospheric extinction for the upcoming Zwicky Transient Factory Survey (ZTF). In order to model the atmosphere, we created a program that combines input data and catalogue values, and efficiently handles them. Then, using PTF data and the SDSS catalogue, we created several models to fit the data, and tested the quality of the fits by chi-square minimization. This will allow us to optimize atmospheric extinction for the upcoming ZTF in the near future.

The Imponderable Bloom: A Multimodal Social Semiotic Analysis of an Online Secondary English Course

ERIC Educational Resources Information Center

Lynch, Tom Liam

2014-01-01

The use of online learning and other software-powered technologies is on the rise in the United States, encouraged financially and politically by governmental and commercial entities. Specifically, online courses are gaining ground in K-12 public schools, schools which often purchase from third-party providers. After a decade in the New York City…

More flexibility in representing geometric distortion in astronomical images

NASA Astrophysics Data System (ADS)

Shupe, David L.; Laher, Russ R.; Storrie-Lombardi, Lisa; Surace, Jason; Grillmair, Carl; Levitan, David; Sesar, Branimir

2012-09-01

A number of popular software tools in the public domain are used by astronomers, professional and amateur alike, but some of the tools that have similar purposes cannot be easily interchanged, owing to the lack of a common standard. For the case of image distortion, SCAMP and SExtractor, available from Astromatic.net, perform astrometric calibration and source-object extraction on image data, and image-data geometric distortion is computed in celestial coordinates with polynomial coefficients stored in the FITS header with the PV i_j keywords. Another widely-used astrometric-calibration service, Astrometry.net, solves for distortion in pixel coordinates using the SIP convention that was introduced by the Spitzer Science Center. Up until now, due to the complexity of these distortion representations, it was very difficult to use the output of one of these packages as input to the other. New Python software, along with faster-computing C-language translations, have been developed at the Infrared Processing and Analysis Center (IPAC) to convert FITS-image headers from PV to SIP and vice versa. It is now possible to straightforwardly use Astrometry.net for astrometric calibration and then SExtractor for source-object extraction. The new software also enables astrometric calibration by SCAMP followed by image visualization with tools that support SIP distortion, but not PV . The software has been incorporated into the image-processing pipelines of the Palomar Transient Factory (PTF), which generate FITS images with headers containing both distortion representations. The software permits the conversion of archived images, such as from the Spitzer Heritage Archive and NASA/IPAC Infrared Science Archive, from SIP to PV or vice versa. This new capability renders unnecessary any new representation, such as the proposed TPV distortion convention.

VizieR Online Data Catalog: Absorption velocities for 21 super-luminous SNe Ic (Liu+, 2017)

NASA Astrophysics Data System (ADS)

Liu, Y.-Q.; Modjaz, M.; Bianco, F. B.

2018-04-01

We have collected the spectra of all available super-luminous supernovae (SLSNe) Ic that have a date of maximum light published before April of 2016. These SLSNe Ic were mainly discovered and observed by the All-Sky Automated Survey for Supernovae (ASAS-SN), the Catalina Real-Time Transient Survey, the Dark Energy Survey (DES), the Hubble Space Telescope Cluster Supernova Survey, the Pan-STARRS1 Medium Deep Survey (PS1), the Public ESO Spectroscopic Survey of Transient Objects (PESSTO), the Intermediate Palomar Transient Factory (iPTF) as well as the Palomar Transient Factory (PTF), and the Supernova Legacy Survey (SNLS). See table 1. (2 data files).

The Palomar Transient Factory: High Quality Realtime Data Processing in a Cost-Constrained Environment

NASA Astrophysics Data System (ADS)

Surace, J.; Laher, R.; Masci, F.; Grillmair, C.; Helou, G.

2015-09-01

The Palomar Transient Factory (PTF) is a synoptic sky survey in operation since 2009. PTF utilizes a 7.1 square degree camera on the Palomar 48-inch Schmidt telescope to survey the sky primarily at a single wavelength (R-band) at a rate of 1000-3000 square degrees a night. The data are used to detect and study transient and moving objects such as gamma ray bursts, supernovae and asteroids, as well as variable phenomena such as quasars and Galactic stars. The data processing system at IPAC handles realtime processing and detection of transients, solar system object processing, high photometric precision processing and light curve generation, and long-term archiving and curation. This was developed under an extremely limited budget profile in an unusually agile development environment. Here we discuss the mechanics of this system and our overall development approach. Although a significant scientific installation in of itself, PTF also serves as the prototype for our next generation project, the Zwicky Transient Facility (ZTF). Beginning operations in 2017, ZTF will feature a 50 square degree camera which will enable scanning of the entire northern visible sky every night. ZTF in turn will serve as a stepping stone to the Large Synoptic Survey Telescope (LSST), a major NSF facility scheduled to begin operations in the early 2020s.

Disc origin of broad optical emission lines of the TDE candidate PTF09djl

NASA Astrophysics Data System (ADS)

Liu, F. K.; Zhou, Z. Q.; Cao, R.; Ho, L. C.; Komossa, S.

2017-11-01

An otherwise dormant supermassive black hole (SMBH) in a galactic nucleus flares up when it tidally disrupts a star passing by. Most of the tidal disruption events (TDEs) and candidates discovered in the optical/UV have broad optical emission lines with complex and diverse profiles of puzzling origin. In this Letter, we show that the double-peaked broad H α line of the TDE candidate PTF09djl can be well modelled with a relativistic elliptical accretion disc and the peculiar substructures with one peak at the line rest wavelength and the other redshifted to about 3.5 × 104 km s-1 are mainly due to the orbital motion of the emitting matter within the disc plane of large inclination 88° and pericentre orientation nearly vertical to the observer. The accretion disc has an extreme eccentricity 0.966 and semimajor axis of 340 BH Schwarzschild radii. The viewing angle effects of large disc inclination lead to significant attenuation of He emission lines originally produced at large electron scattering optical depth and to the absence/weakness of He emission lines in the spectra of PTF09djl. Our results suggest that the diversities of line intensity ratios among the line species in optical TDEs are probably due to the differences of disc inclinations.

Nebular phase observations of the Type-Ib supernova iPTF13bvn favour a binary progenitor

NASA Astrophysics Data System (ADS)

Kuncarayakti, H.; Maeda, K.; Bersten, M. C.; Folatelli, G.; Morrell, N.; Hsiao, E. Y.; González-Gaitán, S.; Anderson, J. P.; Hamuy, M.; de Jaeger, T.; Gutiérrez, C. P.; Kawabata, K. S.

2015-07-01

Aims: We present and analyse late-time observations of the Type-Ib supernova with possible pre-supernova progenitor detection, iPTF13bvn, which were done ~300 days after the explosion. We discuss them in the context of constraints on the supernova's progenitor. Previous studies have proposed two possible natures for the progenitor of the supernova, i.e. a massive Wolf-Rayet star or a lower-mass star in a close binary system. Methods: Our observations show that the supernova has entered the nebular phase, with the spectrum dominated by Mg I]λλ4571, [O I]λλ6300, 6364, and [Ca II]λλ7291, 7324 emission lines. We measured the emission line fluxes to estimate the core oxygen mass and compared the [O I]/[Ca II] line ratio with other supernovae. Results.The core oxygen mass of the supernova progenitor was estimated to be ≲0.7 M⊙, which implies initial progenitor mass that does not exceed ~15-17 M⊙.Since the derived mass is too low for a single star to become a Wolf-Rayet star, this result lends more support to the binary nature of the progenitor star of iPTF13bvn. The comparison of [O I]/[Ca II] line ratio with other supernovae also shows that iPTF13bvn appears to be in close association with the lower mass progenitors of stripped-envelope and Type-II supernovae. Based on observations obtained at the Southern Astrophysical Research (SOAR) telescope, which is a joint project of the Ministério da Ciência, Tecnologia, e Inovação (MCTI) da República Federativa do Brasil, the US National Optical Astronomy Observatory (NOAO), the University of North Carolina at Chapel Hill (UNC), and Michigan State University (MSU); Chilean Telescope Time Allocation Committee proposal CN2014A-91.

Revisiting Optical Tidal Disruption Events with iPTF16axa

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hung, T.; Gezari, S.; Blagorodnova, N.

We report the discovery by the intermediate Palomar Transient Factory (iPTF) of a candidate tidal disruption event (TDE) iPTF16axa at z = 0.108 and present its broadband photometric and spectroscopic evolution from three months of follow-up observations with ground-based telescopes and Swift. The light curve is well fitted with a t -5/3 decay, and we constrain the rise time to peak to be <49 rest-frame days after disruption, which is roughly consistent with the fallback timescale expected for the ~5 × 10 6 M ⊙ black hole inferred from the stellar velocity dispersion of the host galaxy. The UV and optical spectral energy distribution is well described by a constant blackbody temperature of T ~ 3 × 10 4 K over the monitoring period, with an observed peak luminosity of 1.1 × 10 44 erg s -1. The optical spectra are characterized by a strong blue continuum and broad He ii and Hα lines, which are characteristic of TDEs. We compare the photometric and spectroscopic signatures of iPTF16axa with 11 TDE candidates in the literature with well-sampled optical light curves. Based on a single-temperature fit to the optical and near-UV photometry, most of these TDE candidates have peak luminosities confined between log(L [erg s -1]) = 43.4–44.4, with constant temperatures of a few ×104 K during their power-law declines, implying blackbody radii on the order of 10 times the tidal disruption radius, that decrease monotonically with time. For TDE candidates with hydrogen and helium emission, the high helium-to-hydrogen ratios suggest that the emission arises from high-density gas, where nebular arguments break down. In conclusion, we find no correlation between the peak luminosity and the black hole mass, contrary to the expectations for TDEs to havemore » $$\\dot{M}\\propto {M}_{\\mathrm{BH}}^{-1/2}$$.« less

Revisiting Optical Tidal Disruption Events with iPTF16axa

DOE PAGES

Hung, T.; Gezari, S.; Blagorodnova, N.; ...

2017-06-08

We report the discovery by the intermediate Palomar Transient Factory (iPTF) of a candidate tidal disruption event (TDE) iPTF16axa at z = 0.108 and present its broadband photometric and spectroscopic evolution from three months of follow-up observations with ground-based telescopes and Swift. The light curve is well fitted with a t -5/3 decay, and we constrain the rise time to peak to be <49 rest-frame days after disruption, which is roughly consistent with the fallback timescale expected for the ~5 × 10 6 M ⊙ black hole inferred from the stellar velocity dispersion of the host galaxy. The UV and optical spectral energy distribution is well described by a constant blackbody temperature of T ~ 3 × 10 4 K over the monitoring period, with an observed peak luminosity of 1.1 × 10 44 erg s -1. The optical spectra are characterized by a strong blue continuum and broad He ii and Hα lines, which are characteristic of TDEs. We compare the photometric and spectroscopic signatures of iPTF16axa with 11 TDE candidates in the literature with well-sampled optical light curves. Based on a single-temperature fit to the optical and near-UV photometry, most of these TDE candidates have peak luminosities confined between log(L [erg s -1]) = 43.4–44.4, with constant temperatures of a few ×104 K during their power-law declines, implying blackbody radii on the order of 10 times the tidal disruption radius, that decrease monotonically with time. For TDE candidates with hydrogen and helium emission, the high helium-to-hydrogen ratios suggest that the emission arises from high-density gas, where nebular arguments break down. In conclusion, we find no correlation between the peak luminosity and the black hole mass, contrary to the expectations for TDEs to havemore » $$\\dot{M}\\propto {M}_{\\mathrm{BH}}^{-1/2}$$.« less

THE DETECTION RATE OF EARLY UV EMISSION FROM SUPERNOVAE: A DEDICATED GALEX/PTF SURVEY AND CALIBRATED THEORETICAL ESTIMATES

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ganot, Noam; Gal-Yam, Avishay; Ofek, Eran O.

The radius and surface composition of an exploding massive star, as well as the explosion energy per unit mass, can be measured using early UV observations of core-collapse supernovae (SNe). We present the first results from a simultaneous GALEX/PTF search for early ultraviolet (UV) emission from SNe. Six SNe II and one Type II superluminous SN (SLSN-II) are clearly detected in the GALEX near-UV (NUV) data. We compare our detection rate with theoretical estimates based on early, shock-cooling UV light curves calculated from models that fit existing Swift and GALEX observations well, combined with volumetric SN rates. We find thatmore » our observations are in good agreement with calculated rates assuming that red supergiants (RSGs) explode with fiducial radii of 500 R{sub ⊙}, explosion energies of 10{sup 51} erg, and ejecta masses of 10 M{sub ⊙}. Exploding blue supergiants and Wolf–Rayet stars are poorly constrained. We describe how such observations can be used to derive the progenitor radius, surface composition, and explosion energy per unit mass of such SN events, and we demonstrate why UV observations are critical for such measurements. We use the fiducial RSG parameters to estimate the detection rate of SNe during the shock-cooling phase (<1 day after explosion) for several ground-based surveys (PTF, ZTF, and LSST). We show that the proposed wide-field UV explorer ULTRASAT mission is expected to find >85 SNe per year (∼0.5 SN per deg{sup 2}), independent of host galaxy extinction, down to an NUV detection limit of 21.5 mag AB. Our pilot GALEX/PTF project thus convincingly demonstrates that a dedicated, systematic SN survey at the NUV band is a compelling method to study how massive stars end their life.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Taddia, Francesco; Fremling, C.; Sollerman, J.

Type Ic supernovae (SNe Ic) arise from the core-collapse of H- (and He-) poor stars, which could either be single Wolf-Rayet (WR) stars or lower-mass stars stripped of their envelope by a companion. Their light curves are radioactively powered and usually show a fast rise to peak (~10-15 d), without any early (in the first few days) emission bumps (with the exception of broad-lined SNe Ic) as sometimes seen for other types of stripped-envelope SNe (e.g., Type IIb SN 1993J and Type Ib SN 2008D). Here, we have studied iPTF15dtg, a spectroscopically normal SN Ic with an early excess inmore » the optical light curves followed by a long (~30 d) rise to the main peak. It is the first spectroscopically-normal double-peaked SN Ic to be observed. Our aim is to determine the properties of this explosion and of its progenitor star. Methods. Optical photometry and spectroscopy of iPTF15dtg was obtained with multiple telescopes. The resulting light curves and spectral sequence are analyzed and modeled with hydrodynamical and analytical models, with particular focus on the early emission. iPTF15dtg is a slow rising SN Ic, similar to SN 2011bm. Hydrodynamical modeling of the bolometric properties reveals a large ejecta mass (~10 M ⊙) and strong 56Ni mixing. The luminous early emission can be reproduced if we account for the presence of an extended (≳500 R ⊙), low-mass (≳0.045 M ⊙) envelope around the progenitor star. Alternative scenarios for the early peak, such as the interaction with a companion, a shock-breakout (SBO) cooling tail from the progenitor surface, or a magnetar-driven SBO are not favored. In conclusion, the large ejecta mass and the presence of H- and He-free extended material around the star suggest that the progenitor of iPTF15dtg was a massive (≳35 M ⊙) WR star that experienced strong mass loss.« less

Radio Observations of a Sample of Broad-Line Type IC Supernovae Discovered by PTF/IPTF: A Search for Relativistic Explosions

DOE PAGES

Corsi, Alessandra; Gal-Yam, A.; Kulkarni, S. R.; ...

2016-10-10

Long duration γ-ray bursts are a rare subclass of stripped-envelope core-collapse supernovae (SNe) that launch collimated relativistic outflows (jets). All γ-ray-burst-associated SNe are spectroscopically Type Ic, with broad-lines, but the fraction of broad-lined SNe Ic harboring low-luminosity γ-ray bursts remains largely unconstrained. Some SNe should be accompanied by off-axis γ-ray burst jets that initially remain invisible, but then emerge as strong radio sources (as the jets decelerate). However, this critical prediction of the jet model for γ-ray bursts has yet to be verified observationally. Here, we present K. G. Jansky Very Large Array observations of 15 broad-lined SNe of Type Ic discovered by the Palomar Transient Factory in an untargeted manner. Most of the SNe in our sample exclude radio emission observationally similar to that of the radio-loud, relativistic SN 1998bw. We constrain the fraction of 1998bw-like broad-lined SNe Ic to bemore » $$\\lesssim 41 \\% $$ (99.865% confidence). Most of the events in our sample also exclude off-axis jets similar to GRB 031203 and GRB 030329, but we cannot rule out off-axis γ-ray bursts expanding in a low-density wind environment. Three SNe in our sample are detected in the radio. PTF11qcj and PTF14dby show late-time radio emission with average ejecta speeds of ≈0.3–0.4 c, on the dividing line between relativistic and "ordinary" SNe. The speed of PTF11cmh radio ejecta is poorly constrained. We estimate that $$\\lesssim 85 \\% $$ (99.865% confidence) of the broad-lined SNe Ic in our sample may harbor off-axis γ-ray bursts expanding in media with densities in the range probed by this study.« less

Strong near-infrared carbon in the Type Ia supernova iPTF13ebh

DOE PAGES

Hsiao, E. Y.; Burns, C. R.; Contreras, C.; ...

2015-05-22

We present near-infrared (NIR) time-series spectroscopy, as well as complementary ultraviolet (UV), optical, and NIR data, of the Type Ia supernova (SN Ia) iPTF13ebh, which was discovered within two days from the estimated time of explosion. The first NIR spectrum was taken merely 2.3 days after explosion and may be the earliest NIR spectrum yet obtained of a SN Ia. The most striking features in the spectrum are several NIR C I lines, and the C Iλ1.0693 μm line is the strongest ever observed in a SN Ia. Interestingly, no strong optical C II counterparts were found, even though themore » optical spectroscopic time series began early and is densely cadenced. Except at the very early epochs, within a few days from the time of explosion, we show that the strong NIR C I compared to the weaker optical C II appears to be general in SNe Ia. iPTF13ebh is a fast decliner with Δm15(B) = 1.79 ± 0.01, and its absolute magnitude obeys the linear part of the width-luminosity relation. It is therefore categorized as a “transitional” event, on the fast-declining end of normal SNe Ia as opposed to subluminous/91bg-like objects. iPTF13ebh shows NIR spectroscopic properties that are distinct from both the normal and subluminous/91bg-like classes, bridging the observed characteristics of the two classes. These NIR observations suggest that composition and density of the inner core are similar to that of 91bg-like events, and that it has a deep-reaching carbon burning layer that is not observed in more slowly declining SNe Ia. Furthermore, there is also a substantial difference between the explosion times inferred from the early-time light curve and the velocity evolution of the Si II λ0.6355 μm line, implying a long dark phase of ~4 days.« less

Revisiting Optical Tidal Disruption Events with iPTF16axa

NASA Astrophysics Data System (ADS)

Hung, T.; Gezari, S.; Blagorodnova, N.; Roth, N.; Cenko, S. B.; Kulkarni, S. R.; Horesh, A.; Arcavi, I.; McCully, C.; Yan, Lin; Lunnan, R.; Fremling, C.; Cao, Y.; Nugent, P. E.; Wozniak, P.

2017-06-01

We report the discovery by the intermediate Palomar Transient Factory (iPTF) of a candidate tidal disruption event (TDE) iPTF16axa at z = 0.108 and present its broadband photometric and spectroscopic evolution from three months of follow-up observations with ground-based telescopes and Swift. The light curve is well fitted with a t -5/3 decay, and we constrain the rise time to peak to be <49 rest-frame days after disruption, which is roughly consistent with the fallback timescale expected for the ˜5 × 106 M ⊙ black hole inferred from the stellar velocity dispersion of the host galaxy. The UV and optical spectral energy distribution is well described by a constant blackbody temperature of T ˜ 3 × 104 K over the monitoring period, with an observed peak luminosity of 1.1 × 1044 erg s-1. The optical spectra are characterized by a strong blue continuum and broad He II and Hα lines, which are characteristic of TDEs. We compare the photometric and spectroscopic signatures of iPTF16axa with 11 TDE candidates in the literature with well-sampled optical light curves. Based on a single-temperature fit to the optical and near-UV photometry, most of these TDE candidates have peak luminosities confined between log(L [erg s-1]) = 43.4-44.4, with constant temperatures of a few ×104 K during their power-law declines, implying blackbody radii on the order of 10 times the tidal disruption radius, that decrease monotonically with time. For TDE candidates with hydrogen and helium emission, the high helium-to-hydrogen ratios suggest that the emission arises from high-density gas, where nebular arguments break down. We find no correlation between the peak luminosity and the black hole mass, contrary to the expectations for TDEs to have \\dot{M}\\propto {M}{BH}-1/2.

LRH-1 and PTF1-L coregulate an exocrine pancreas-specific transcriptional network for digestive function.

PubMed

Holmstrom, Sam R; Deering, Tye; Swift, Galvin H; Poelwijk, Frank J; Mangelsdorf, David J; Kliewer, Steven A; MacDonald, Raymond J

2011-08-15

We have determined the cistrome and transcriptome for the nuclear receptor liver receptor homolog-1 (LRH-1) in exocrine pancreas. Chromatin immunoprecipitation (ChIP)-seq and RNA-seq analyses reveal that LRH-1 directly induces expression of genes encoding digestive enzymes and secretory and mitochondrial proteins. LRH-1 cooperates with the pancreas transcription factor 1-L complex (PTF1-L) in regulating exocrine pancreas-specific gene expression. Elimination of LRH-1 in adult mice reduced the concentration of several lipases and proteases in pancreatic fluid and impaired pancreatic fluid secretion in response to cholecystokinin. Thus, LRH-1 is a key regulator of the exocrine pancreas-specific transcriptional network required for the production and secretion of pancreatic fluid.

The Effect of Vocal Fold Inferior Surface Hypertrophy on Voice Function in Excised Canine Larynges.

PubMed

Wang, Ruiqing; Bao, Huijing; Xu, Xinlin; Piotrowski, David; Zhang, Yu; Zhuang, Peiyun

2017-08-18

This study aimed to explore the changes in vocal fold inferior surface hypertrophy (VFISH) on vocal fold vibration by aerodynamic and acoustic analysis. The present study allows us to gain new insights into the subglottal convergence angle (SCA), which will change with VFISH. The study is prospective, and designed for repeated measures with each excised canine larynx serving as own control. Three degrees of VFISH, initial, mild, and severe, were simulated by injecting different doses of fructose injections into the inferior surface of the vocal folds of 10 excised canine larynges. Computed tomographic images of the larynx were gathered, and three-dimensional models of the airway and vocal folds were reconstructed using the Mimics software. The SCA was measured from the reconstructed models. Phonation threshold flow (PTF), phonation threshold pressure (PTP), and mean flow rate (MFR) were recorded directly in the excised canine larynx phonation setup. Glottal resistance (GR), sound pressure level (SPL), fundamental frequency (F0), and formants 1-4 (F1-4) were measured when subglottal pressure (P sub ) was at 1.5 kPa or 2.5 kPa, separately. Using ordinary one-way analysis of variance, we compared the aerodynamic outcomes and voice quality among the three groups of hypertrophy. The SCA, PTP, and PTF increased with the degree of VFISH. When the P sub was controlled at 1.5 kPa or 2.5 kPa, F0 also increased significantly with the degree of VFISH of the excised canine larynges. The MFR, GR, SPL, and F1-4 had little change between the three groups and were not significantly different. The VFISH makes onset phonation more difficult, increases the SCA, and increases the F0 in sustained phonation. Copyright © 2017 The Voice Foundation. Published by Elsevier Inc. All rights reserved.

The IPAC Image Subtraction and Discovery Pipeline for the Intermediate Palomar Transient Factory

NASA Astrophysics Data System (ADS)

Masci, Frank J.; Laher, Russ R.; Rebbapragada, Umaa D.; Doran, Gary B.; Miller, Adam A.; Bellm, Eric; Kasliwal, Mansi; Ofek, Eran O.; Surace, Jason; Shupe, David L.; Grillmair, Carl J.; Jackson, Ed; Barlow, Tom; Yan, Lin; Cao, Yi; Cenko, S. Bradley; Storrie-Lombardi, Lisa J.; Helou, George; Prince, Thomas A.; Kulkarni, Shrinivas R.

2017-01-01

We describe the near real-time transient-source discovery engine for the intermediate Palomar Transient Factory (iPTF), currently in operations at the Infrared Processing and Analysis Center (IPAC), Caltech. We coin this system the IPAC/iPTF Discovery Engine (or IDE). We review the algorithms used for PSF-matching, image subtraction, detection, photometry, and machine-learned (ML) vetting of extracted transient candidates. We also review the performance of our ML classifier. For a limiting signal-to-noise ratio of 4 in relatively unconfused regions, bogus candidates from processing artifacts and imperfect image subtractions outnumber real transients by ≃10:1. This can be considerably higher for image data with inaccurate astrometric and/or PSF-matching solutions. Despite this occasionally high contamination rate, the ML classifier is able to identify real transients with an efficiency (or completeness) of ≃97% for a maximum tolerable false-positive rate of 1% when classifying raw candidates. All subtraction-image metrics, source features, ML probability-based real-bogus scores, contextual metadata from other surveys, and possible associations with known Solar System objects are stored in a relational database for retrieval by the various science working groups. We review our efforts in mitigating false-positives and our experience in optimizing the overall system in response to the multitude of science projects underway with iPTF.

Equatorial late-afternoon periodic TEC fluctuations observed by multiple GPS receivers

NASA Astrophysics Data System (ADS)

Tsugawa, T.; Maruyama, T.; Saito, S.; Ishii, M.

2009-12-01

We report, for the first time, equatorial periodic total electron content (TEC) fluctuations observed in the late afternoon by multiple GPS receivers. As a part of Southeast Asia low-latitude ionospheric network (SEALION), GPS receivers at Chiang Mai and Chumphon, Thailand, have been operated since 2005. We found that periodic TEC fluctuations (PTF) with the periods of 15-30 minutes are often observed at these two sites in the spring (Apr-May) late afternoon. Further investigations using multiple GPS receivers in Southeast Asia revealed that the PTFs propagate at 150-200 m/s away from the equator and their amplitudes depend on the satellite azimuth angle. Statistical study of the PTF activity at different latitudes and longitudes clarified that the PTFs are not observed at mid-latitudes, and their seasonal variations are different at different longitudes and at geomagnetically conjugate regions. These observational results indicate that the PTFs are caused by the atmospheric gravity waves (AGW) which are generated in the equatorial lower atmosphere and propagate away from the equator. Simultaneous GPS-TEC and ionosonde observations at Chumphon revealed that the day-to-day variations of PTF activities are well correlated with those of the rate of TEC change index (ROTI) and the occurrence of equatorial spread F (ESF) after the sunset, indicating the PTFs may be related with the onset of the ESF and plasma bubbles.

The IPAC Image Subtraction and Discovery Pipeline for the Intermediate Palomar Transient Factory

NASA Technical Reports Server (NTRS)

Masci, Frank J.; Laher, Russ R.; Rebbapragada, Umaa D.; Doran, Gary B.; Miller, Adam A.; Bellm, Eric; Kasliwal, Mansi; Ofek, Eran O.; Surace, Jason; Shupe, David L.;

Efficacy of a DVD-Based Smoking Cessation Intervention for African Americans

PubMed Central

Baker, Elizabeth A.; Robinson, Robert G.

2014-01-01

Introduction: Previous research suggests that African American smokers may have improved outcomes if interventions are culturally specific. However, few interventions sufficiently address the unique needs of this population in a format with large reach potential. The purpose of this study was to test the efficacy of a newly developed digital video disc (DVD)-based cessation intervention targeting African Americans. Methods: In a 2-arm randomized trial, smokers (N = 140) were randomly assigned to view either the new Pathways to Freedom (PTF) DVD or a standard control DVD. Participants were assessed at baseline, immediately postviewing the DVD, and at a 1-month follow-up. The primary outcomes were feasibility and process variables, including intervention evaluations, readiness to quit, and risk perceptions, and smoking-related behavior changes were examined as secondary outcomes. Results: Findings demonstrated the hypothesized positive effects of the PTF DVD compared with the control DVD on content evaluations, risk perceptions, and readiness to quit at follow-up. Conclusions: We found initial evidence for the efficacy of the PTF DVD as a stand-alone intervention. Future research will test the efficacy of the DVD for smoking cessation in a larger randomized trial. The ultimate goal of this research is to validate a new intervention for an underserved community of smokers that can be used in multiple settings, such as community health clinics, primary care, quitlines, cessation clinics, and seminars/workshops. PMID:24838844

Laboratory Tests on Post-Filtration Precipitation in the WTP Pretreatment Process

DOE Office of Scientific and Technical Information (OSTI.GOV)

Russell, Renee L.; Peterson, Reid A.; Rinehart, Donald E.

Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed, and operated as part of a plan to respond to issue M12, "Undemonstrated Leaching Processes," of the External Flowsheet Review Team (EFRT) issue response plan (Barnes et al. 2006). The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, andmore » slurry washing processes. The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. A simplified flow diagram of the PEP system is shown in Figure 1.1. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP; and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario has caustic leaching conducted in the UFP-1 ultrafiltration feed preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP; vessels UFP-VSL-00001A and B in the WTP PTF).« less

A Quick Test on Rotation Period Clustering for the Small Members of the Koronis Family

NASA Astrophysics Data System (ADS)

Chang, Chan-Kao; Lin, Hsing-Wen; Ip, Wing-Huen

2016-01-01

Rotation period clustering in prograde/retrograde rotators might be the preliminary indication of the Slivan state in the Koronis family as a result of the Yarkovsky-O’Keefe-Radzievskii-Paddack effect. We follow the general scenario of dispersion in the semimajor axis of the asteroid family members to separate prograde and retrograde rotators in the Koronis family. From the available rotation periods obtained from PTF/iPTF, we were unable to find the rotation period clustering of objects with H ≳ 12 mag in the Koronis family. This could be the result of the intermittent collisional process of small asteroids (D ≲ 20 km) which leads to astray Yarkovsky drifting. Measurement of the pole orientations of our sample will verify our preliminary result and validate our method.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Taddia, Francesco; Sollerman, J.; Fremling, C.

Context. Supernova (SN) 1987A was a peculiar hydrogen-rich event with a long-rising (~84 d) light curve, stemming from the explosion of a compact blue supergiant star. Only a few similar events have been presented in the literature in recent decades. Aims. We present new data for a sample of six long-rising Type II SNe (SNe II), three of which were discovered and observed by the Palomar Transient Factory (PTF) and three observed by the Caltech Core-Collapse Project (CCCP). Our aim is to enlarge this small family of long-rising SNe II, characterizing their differences in terms of progenitor and explosion parameters.more » We also study the metallicity of their environments. Methods. Optical light curves, spectra, and host-galaxy properties of these SNe are presented and analyzed. Detailed comparisons with known SN 1987A-like events in the literature are shown, with particular emphasis on the absolute magnitudes, colors, expansion velocities, and host-galaxy metallicities. Bolometric properties are derived from the multiband light curves. By modeling the early-time emission with scaling relations derived from the SuperNova Explosion Code (SNEC) models of MESA progenitor stars, we estimate the progenitor radii of these transients. The modeling of the bolometric light curves also allows us to estimate other progenitor and explosion parameters, such as the ejected 56Ni mass, the explosion energy, and the ejecta mass. Results. We present PTF12kso, a long-rising SN II that is estimated to have the largest amount of ejected 56Ni mass measured for this class. PTF09gpn and PTF12kso are found at the lowest host metallicities observed for this SN group. The variety of early light-curve luminosities depends on the wide range of progenitor radii of these SNe, from a few tens of R ⊙ (SN 2005ci) up to thousands (SN 2004ek) with some intermediate cases between 100 R ⊙ (PTF09gpn) and 300 R ⊙ (SN 2004em). Conclusions. We confirm that long-rising SNe II with light-curve shapes closely resembling that of SN 1987A generally arise from blue supergiant (BSG) stars. However, some of them, such as SN 2004em, likely have progenitors with larger radii (~300 R ⊙, typical of yellow supergiants) and can thus be regarded as intermediate cases between normal SNe IIP and SN 1987A-like SNe. Some extended red supergiant (RSG) stars such as the progenitor of SN 2004ek can also produce long-rising SNe II if they synthesized a large amount of 56Ni in the explosion. Lastly, low host metallicity is confirmed as a characteristic of the SNe arising from compact BSG stars.« less

Long-rising Type II supernovae from Palomar Transient Factory and Caltech Core-Collapse Project

DOE PAGES

Taddia, Francesco; Sollerman, J.; Fremling, C.; ...

2016-03-09

Context. Supernova (SN) 1987A was a peculiar hydrogen-rich event with a long-rising (~84 d) light curve, stemming from the explosion of a compact blue supergiant star. Only a few similar events have been presented in the literature in recent decades. Aims. We present new data for a sample of six long-rising Type II SNe (SNe II), three of which were discovered and observed by the Palomar Transient Factory (PTF) and three observed by the Caltech Core-Collapse Project (CCCP). Our aim is to enlarge this small family of long-rising SNe II, characterizing their differences in terms of progenitor and explosion parameters.more » We also study the metallicity of their environments. Methods. Optical light curves, spectra, and host-galaxy properties of these SNe are presented and analyzed. Detailed comparisons with known SN 1987A-like events in the literature are shown, with particular emphasis on the absolute magnitudes, colors, expansion velocities, and host-galaxy metallicities. Bolometric properties are derived from the multiband light curves. By modeling the early-time emission with scaling relations derived from the SuperNova Explosion Code (SNEC) models of MESA progenitor stars, we estimate the progenitor radii of these transients. The modeling of the bolometric light curves also allows us to estimate other progenitor and explosion parameters, such as the ejected 56Ni mass, the explosion energy, and the ejecta mass. Results. We present PTF12kso, a long-rising SN II that is estimated to have the largest amount of ejected 56Ni mass measured for this class. PTF09gpn and PTF12kso are found at the lowest host metallicities observed for this SN group. The variety of early light-curve luminosities depends on the wide range of progenitor radii of these SNe, from a few tens of R ⊙ (SN 2005ci) up to thousands (SN 2004ek) with some intermediate cases between 100 R ⊙ (PTF09gpn) and 300 R ⊙ (SN 2004em). Conclusions. We confirm that long-rising SNe II with light-curve shapes closely resembling that of SN 1987A generally arise from blue supergiant (BSG) stars. However, some of them, such as SN 2004em, likely have progenitors with larger radii (~300 R ⊙, typical of yellow supergiants) and can thus be regarded as intermediate cases between normal SNe IIP and SN 1987A-like SNe. Some extended red supergiant (RSG) stars such as the progenitor of SN 2004ek can also produce long-rising SNe II if they synthesized a large amount of 56Ni in the explosion. Lastly, low host metallicity is confirmed as a characteristic of the SNe arising from compact BSG stars.« less

The Zwicky Transient Facility

NASA Astrophysics Data System (ADS)

Kulkarni, Shrinivas R.

2016-01-01

The Zwicky Transient Facility (ZTF) has been designed with a singular focus: a systematic exploration of the night sky at a magnitude level well suited for spectral classification and follow up with the existing class of 4-m to 10-m class telescopes. ZTF is the successor to the Palomar Transient Factory (PTF). The discovery engine for ZTF is a 47 square degree camera (realized through 16 e2V monolithic CCDs) that fills the entire focal plane of the 48-inch Oschin telescope of the Palomar Observatory. Single 30-s epoch sensitivity is about 20.5 in g and R bands. The Infarared Processing & Analysis Center (IPAC) is the data center for ZTF. ZTF is a public-private partnership with equal contributions from a consortium of world-wide partners and an NSF MSIP grant. Forty percent of ZTF time is set aside for two major community surveys: a 3-day cadence survey of high latitudes (to mimic LSST) and a time domain survey of the entire Northern Galactic plane. We expect first light in February 2017 and begin a 3-year survey starting summer of 2017. The first year will be spent on building up deep reference images of the sky (a must for transient surveys). During the second year IPAC will deliver near archival quality photometric products within 12 hours of observations. By comparison to reference images photometric alerts will be sent out. Year 3 will see the near real-time release of image differencing products. A Community Science Advisory Committee (CSAC), chaired by S. Ridgway (NOAO), has been set up to both advise the PI and to ensure that the US community's interests are well served. Astronomers interested in getting a head start on ZTF may wish to peruse the data releases from PTF. Young people (or young at heart) may wish to attend the annual summer school on PTF/ZTF (August, Caltech campus). The Principal Investigator (PI) for the project is S. Kulkarni and the Project Scientist is Eric Bellm.For further details please consult http://www.ptf.caltech.edu/ztf

Pretreatment Engineering Platform Phase 1 Final Test Report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kurath, Dean E.; Hanson, Brady D.; Minette, Michael J.

2009-12-23

Pacific Northwest National Laboratory (PNNL) was tasked by Bechtel National Inc. (BNI) on the River Protection Project, Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to conduct testing to demonstrate the performance of the WTP Pretreatment Facility (PTF) leaching and ultrafiltration processes at an engineering-scale. In addition to the demonstration, the testing was to address specific technical issues identified in Issue Response Plan for Implementation of External Flowsheet Review Team (EFRT) Recommendations - M12, Undemonstrated Leaching Processes.( ) Testing was conducted in a 1/4.5-scale mock-up of the PTF ultrafiltration system, the Pretreatment Engineering Platform (PEP). Parallel laboratory testing wasmore » conducted in various PNNL laboratories to allow direct comparison of process performance at an engineering-scale and a laboratory-scale. This report presents and discusses the results of those tests.« less

PTF1 J191905.19+481506.2—A partially eclipsing AM CVn system discovered in the Palomar transient factory

DOE Office of Scientific and Technical Information (OSTI.GOV)

Levitan, David; Groot, Paul J.; Prince, Thomas A.

2014-04-20

We report on PTF1 J191905.19+481506.2, a newly discovered, partially eclipsing, outbursting AM CVn system found in the Palomar Transient Factory synoptic survey. This is only the second known eclipsing AM CVn system. We use high-speed photometric observations and phase-resolved spectroscopy to establish an orbital period of 22.4559(3) minutes. We also present a long-term light curve and report on the normal and super-outbursts regularly seen in this system, including a super-outburst recurrence time of 36.8(4) days. We use the presence of the eclipse to place upper and lower limits on the inclination of the system and discuss the number of knownmore » eclipsing AM CVn systems versus what would be expected.« less

Transmission calculation and intensity suppression for a proton therapy system

NASA Astrophysics Data System (ADS)

Chen, Wei; Yang, Jun; Qin, Bin; Liang, ZhiKai; Chen, Qushan; Liu, Kaifeng; Li, Dong; Fan, Mingwu

2018-02-01

A proton therapy project HUST-PTF (HUST Proton Therapy Facility) based on a 250 MeV isochronous superconducting cyclotron is under development in Huazhong University of Science and Technology (HUST). In this paper we report the main design features of the beam line in HUST-PTF project. The energy selection system (ESS) for energy modulation is discussed in detail, including the collimators, momentum slit and transmission calculation. Due to significant difference among the transmissions of ESS for different energies, the intensity suppression scheme by defocusing beam at high energies on collimators in the beam line is proposed and discussed. Finally, the ratios of beam intensities between low and high energies are expected to be controlled within 10 to meet the clinical requirement, and the beam optics of each energy step after intensity suppression is studied respectively.

Small Jovian Trojan Asteroids: An Excess of Slow Rotators

NASA Astrophysics Data System (ADS)

French, Linda M.

2016-01-01

Several lines of evidence support a common origin for, and possible hereditary link between, cometary nuclei and jovian Trojan asteroids. Due to their distance and low albedos, few comet-sized Trojans have been studied. We discuss the rotation properties of Jovian Trojan asteroids less than 30 km in diameter. Approximately half of the objects discussed here were studied using densely sampled lightcurves (French et al. 2015a, b); Stephens et al. 2015), and the other half were sparse lightcurves obtained by the Palomar Transient Factory (PTF; Waszcazk et al. 2015). A significant fraction (~40%) of the objects in the ground-based sample rotate slowly (P > 24h), with measured periods as long as 375 h (Warner and Stephens 2011). The PTF data show a similar excess of slow rotators. Only 5 objects in the combined data set have rotation periods of less than six hours. Three of these fast rotators were contained in the data set of French et al. these three had a geometric mean rotation period of 5.29 hours. A prolate spheroid held together by gravity rotating with this period would have a critical density of 0.43 gm/cm3, a density similar to that of comets (Lamy et al. 2004). Harris et al. (2012) and Warner et al. (2011) have explored the possible effects on asteroid rotational statistics with the results from wide-field surveys. We will examine Trojan rotation statistics with and without the results from the PTF.

Rotation Frequencies of Small Jovian Trojan Asteroids: An Excess of Slow Rotators

NASA Astrophysics Data System (ADS)

French, Linda M.; Stephens, Robert D.; James, David J.; Coley, Daniel; Connour, Kyle

2015-11-01

Several lines of evidence support a common origin for, and possible hereditary link between, cometary nuclei and jovian Trojan asteroids. Due to their distance and low albedos, few comet-sized Trojans have been studied. We discuss the rotation properties of Jovian Trojan asteroids less than 30 km in diameter. Approximately half the 131 objects discussed here were studied using densely sampled lightcurves (French et al. 2015a, b); Stephens et al. 2015), and the other half were sparse lightcurves obtained by the Palomar Transient Factory (PTF; Waszcazk et al. 2015).A significant fraction (~40%) of the objects in the ground-based sample rotate slowly (P > 24h), with measured periods as long as 375 h (Warner and Stephens 2011). The PTF data show a similar excess of slow rotators. Only 5 objects in the combined data set have rotation periods of less than six hours. Three of these fast rotators were contained in the data set of French et al. these three had a geometric mean rotation period of 5.29 hours. A prolate spheroid held together by gravity rotating with this period would have a critical density of 0.43 gm/cm3, a density similar to that of comets (Lamy et al. 2004).Harris et al. (2012) and Warner et al. (2011) have explored the possible effects on asteroid rotational statistics with the results from wide-field surveys. We will examine Trojan rotation statistics with and without the results from the PTF.

A secure data outsourcing scheme based on Asmuth-Bloom secret sharing

NASA Astrophysics Data System (ADS)

Idris Muhammad, Yusuf; Kaiiali, Mustafa; Habbal, Adib; Wazan, A. S.; Sani Ilyasu, Auwal

2016-11-01

Data outsourcing is an emerging paradigm for data management in which a database is provided as a service by third-party service providers. One of the major benefits of offering database as a service is to provide organisations, which are unable to purchase expensive hardware and software to host their databases, with efficient data storage accessible online at a cheap rate. Despite that, several issues of data confidentiality, integrity, availability and efficient indexing of users' queries at the server side have to be addressed in the data outsourcing paradigm. Service providers have to guarantee that their clients' data are secured against internal (insider) and external attacks. This paper briefly analyses the existing indexing schemes in data outsourcing and highlights their advantages and disadvantages. Then, this paper proposes a secure data outsourcing scheme based on Asmuth-Bloom secret sharing which tries to address the issues in data outsourcing such as data confidentiality, availability and order preservation for efficient indexing.

HIGHLY VARIABLE EXTINCTION AND ACCRETION IN THE JET-DRIVING CLASS I-TYPE YOUNG STAR PTF 10nvg (V2492 Cyg, IRAS 20496+4354)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hillenbrand, Lynne A.; Carpenter, John M.; Muirhead, Philip S.

2013-03-15

We report extensive new photometry and spectroscopy of the highly variable young stellar object PTF 10nvg (also known as IRAS 20496+4354 and V2492 Cyg), including optical and near-infrared time-series data as well as mid-infrared and millimeter data. Following the previously reported 2010 rise to R{sub PTF} {approx}<13.{sup m}5 and subsequent fade, during 2011 and 2012 the source underwent additional episodes of brightening, followed by several magnitude dimming events including prolonged faint states at R{sub PTF} {approx}> 20{sup m}. The observed high-amplitude variations are largely consistent with extinction changes ({Delta}A{sub V} up to 30 mag) having a {approx}220 day quasi-periodic signal.more » However, photometry measured when the source was near maximum brightness in mid-2010 as well as in late-2012 does not phase well to this period. Spectral evolution includes not only changes in the spectral slope but also correlated variation in the prominence of TiO/VO/CO bands and atomic line emission, as well as anti-correlated variation in forbidden line emission which, along with H{sub 2}, dominates optical and infrared spectra at faint epochs. Notably, night-to-night variations in several forbidden doublet strengths and ratios are observed. High-dispersion spectra were obtained in a variety of photometric states and reveal time-variable line profiles. Neutral and singly ionized atomic species are likely formed in an accretion flow and/or impact while the origin of zero-velocity atomic Li I {lambda}6707 in emission is unknown. Forbidden lines, including several rare species, exhibit blueshifted emission profiles and likely arise from an outflow/jet. Several of these lines are also seen spatially offset from the continuum source position, presumably in a shocked region of an extended jet. Blueshifted absorption components of the Na I D doublet, K I {lambda}{lambda}7665, 7669 doublet, and the O I 7774 triplet, as well as blueshifted absorption components seen against the broad H{alpha} and Ca II triplet emission lines, similarly are formed in the outflow. CARMA maps resolve on larger scales a spatially extended outflow in millimeter-wavelength CO. We attribute the recently observed photometric and spectroscopic behavior to rotating circumstellar disk material located at separation a Almost-Equal-To 0.7(M{sub *}/M{sub Sun }){sup 1/3} AU from the continuum source, causing the semi-periodic dimming. Occultation of the central star as well as the bright inner disk and the accretion/outflow zones renders shocked gas in the inner part of the jet amenable to observation at the faint epochs. We discuss PTF 10nvg as a source exhibiting both accretion-driven (perhaps analogous to V1647 Ori) and extinction-driven (perhaps analogous to UX Ori or GM Cep) high-amplitude variability phenomena.« less

Aerodynamic method for obtaining the soil water retention curve

NASA Astrophysics Data System (ADS)

Alekseev, V. V.; Maksimov, I. I.

2013-07-01

A new method for the rapid plotting of the soil water retention curve (SWRC) has been proposed that considers the soil water as an environment limited by the soil solid phase on one side and by the soil air on the other side. Both contact surfaces have surface energies, which play the main role in water retention. The use of an idealized soil model with consideration for the nonequilibrium thermodynamic laws and the aerodynamic similarity principles allows us to estimate the volumetric specific surface areas of soils and, using the proposed pedotransfer function (PTF), to plot the SWRC. The volumetric specific surface area of the solid phase, the porosity, and the specific free surface energy at the water-air interface are used as the SWRC parameters. Devices for measuring the parameters are briefly described. The differences between the proposed PTF and the experimental data have been analyzed using the statistical processing of the data.

Using Machine Learning To Predict Which Light Curves Will Yield Stellar Rotation Periods

NASA Astrophysics Data System (ADS)

Agüeros, Marcel; Teachey, Alexander

2018-01-01

Using time-domain photometry to reliably measure a solar-type star's rotation period requires that its light curve have a number of favorable characteristics. The probability of recovering a period will be a non-linear function of these light curve features, which are either astrophysical in nature or set by the observations. We employ standard machine learning algorithms (artificial neural networks and random forests) to predict whether a given light curve will produce a robust rotation period measurement from its Lomb-Scargle periodogram. The algorithms are trained and validated using salient statistics extracted from both simulated light curves and their corresponding periodograms, and we apply these classifiers to the most recent Intermediate Palomar Transient Factory (iPTF) data release. With this pipeline, we anticipate measuring rotation periods for a significant fraction of the ∼4x108 stars in the iPTF footprint.

iPTF16geu: A multiply imaged, gravitationally lensed type Ia supernova

DOE PAGES

Goobar, A.; Amanullah, R.; Kulkarni, S. R.; ...

2017-04-21

We report the discovery of a multiply imaged, gravitationally lensed type Ia supernova, iPTF16geu (SN 2016geu), at redshift z = 0.409. This phenomenon was identified because the light from the stellar explosion was magnified more than 50 times by the curvature of space around matter in an intervening galaxy.We used high-spatial-resolution observations to resolve four images of the lensed supernova, approximately 0.3 arc seconds from the center of the foreground galaxy. The observations probe a physical scale of ~1 kiloparsec, smaller than is typical in other studies of extragalactic gravitational lensing. The large magnification and symmetric image configuration imply closemore » alignment between the lines of sight to the supernova and to the lens. In conclusion, the relative magnifications of the four images provide evidence for substructures in the lensing galaxy.« less

313 new asteroid rotation periods from Palomar Transient Factory observations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chang, Chan-Kao; Ip, Wing-Huen; Lin, Hsing-Wen

2014-06-10

A new asteroid rotation period survey has been carried out by using the Palomar Transient Factory (PTF). Twelve consecutive PTF fields, which covered an area of 87 deg{sup 2} in the ecliptic plane, were observed in the R band with a cadence of ∼20 minutes during 2013 February 15-18. We detected 2500 known asteroids with a diameter range of 0.5 km ≤D ≤ 200 km. Of these, 313 objects had highly reliable rotation periods and exhibited the 'spin barrier' at ∼2 hr. In contrast to the flat spin-rate distribution of the asteroids with 3 km ≤D ≤ 15 km shownmore » by Pravec et al., our results deviated somewhat from a Maxwellian distribution and showed a decrease at the spin rate greater than 5 rev day{sup –1}. One superfast rotator candidate and two possible binary asteroids were also found in this work.« less

iPTF16geu: A multiply imaged, gravitationally lensed type Ia supernova.

PubMed

Goobar, A; Amanullah, R; Kulkarni, S R; Nugent, P E; Johansson, J; Steidel, C; Law, D; Mörtsell, E; Quimby, R; Blagorodnova, N; Brandeker, A; Cao, Y; Cooray, A; Ferretti, R; Fremling, C; Hangard, L; Kasliwal, M; Kupfer, T; Lunnan, R; Masci, F; Miller, A A; Nayyeri, H; Neill, J D; Ofek, E O; Papadogiannakis, S; Petrushevska, T; Ravi, V; Sollerman, J; Sullivan, M; Taddia, F; Walters, R; Wilson, D; Yan, L; Yaron, O

2017-04-21

We report the discovery of a multiply imaged, gravitationally lensed type Ia supernova, iPTF16geu (SN 2016geu), at redshift z = 0.409. This phenomenon was identified because the light from the stellar explosion was magnified more than 50 times by the curvature of space around matter in an intervening galaxy. We used high-spatial-resolution observations to resolve four images of the lensed supernova, approximately 0.3 arc seconds from the center of the foreground galaxy. The observations probe a physical scale of ~1 kiloparsec, smaller than is typical in other studies of extragalactic gravitational lensing. The large magnification and symmetric image configuration imply close alignment between the lines of sight to the supernova and to the lens. The relative magnifications of the four images provide evidence for substructures in the lensing galaxy. Copyright © 2017, American Association for the Advancement of Science.

Modulating Phonation Through Alteration of Vocal Fold Medial Surface Contour

PubMed Central

Mau, Ted; Muhlestein, Joseph; Callahan, Sean; Chan, Roger W.

2012-01-01

Objectives 1. To test whether alteration of the vocal fold medial surface contour can improve phonation. 2. To demonstrate that implant material properties affect vibration even when implant is deep to the vocal fold lamina propria. Study Design Induced phonation of excised human larynges. Methods Thirteen larynges were harvested within 24 hours post-mortem. Phonation threshold pressure (PTP) and flow (PTF) were measured before and after vocal fold injections using either calcium hydroxylapatite (CaHA) or hyaluronic acid (HA). Small-volume injections (median 0.0625 mL) were targeted to the infero-medial aspect of the thyroarytenoid (TA) muscle. Implant locations were assessed histologically. Results The effect of implantation on PTP was material-dependent. CaHA tended to increase PTP, whereas HA tended to decrease PTP (Wilcoxon test P = 0.00013 for onset). In contrast, the effect of implantation on PTF was similar, with both materials tending to decrease PTF (P = 0.16 for onset). Histology confirmed implant presence in the inferior half of the vocal fold vertical thickness. Conclusions Taken together, these data suggested the implants may have altered the vocal fold medial surface contour, potentially resulting in a less convergent or more rectangular glottal geometry as a means to improve phonation. An implant with a closer viscoelastic match to vocal fold cover is desirable for this purpose, as material properties can affect vibration even when the implant is not placed within the lamina propria. This result is consistent with theoretical predictions and implies greater need for surgical precision in implant placement and care in material selection. PMID:22865592

Predicting soil water content at - 33 kPa by pedotransfer functions in stoniness 1 soils in northeast Venezuela.

PubMed

Pineda, M C; Viloria, J; Martínez-Casasnovas, J A; Valera, A; Lobo, D; Timm, L C; Pires, L F; Gabriels, D

2018-02-22

Soil water content is a key property in the study of water available for plants, infiltration, drainage, hydraulic conductivity, irrigation, plant water stress and solute movement. However, its measurement consumes time and, in the case of stony soils, the presence of stones difficult to determinate the water content. An alternative is the use of pedotransfer functions (PTFs), as models to predict these properties from readily available data. The present work shows a comparison of different widely used PTFs to estimate water content at-33 kPa (WR -33kPa ) in high stoniness soils. The work was carried out in the Caramacate River, an area of high interest because the frequent landslides worsen the quality of drinking water. The performance of all evaluated PTFs was compared with a PTF generated for the study area. Results showed that the Urach's PTF presented the best performance in relation to the others and could be used to estimate WR -33kPa in soils of Caramacate River basin. The calculated PTFs had a R 2 of 0.65. This was slightly higher than the R 2 of the Urach's PTF. The inclusion of the rock fragment volume could have the better results. The weak performance of the other PTFs could be related to the fact that the mountain soils of the basin are rich in 2:1 clay and high stoniness, which were not used as independent variables for PTFs to estimate the WR -33kPa .

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ben-Ami, Sagi; Gal-Yam, Avishay; Yaron, Ofer

We present the discovery and extensive early-time observations of the Type Ic supernova (SN) PTF12gzk. Our light curves show a rise of 0.8 mag within 2.5 hr. Power-law fits (f(t){proportional_to}(t - t{sub 0}) {sup n}) to these data constrain the explosion date to within one day. We cannot rule out a quadratic fireball model, but higher values of n are possible as well for larger areas in the fit parameter space. Our bolometric light curve and a dense spectral sequence are used to estimate the physical parameters of the exploding star and of the explosion. We show that the photometricmore » evolution of PTF12gzk is slower than that of most SNe Ic. The high ejecta expansion velocities we measure ({approx}30, 000 km s{sup -1} derived from line minima four days after explosion) are similar to the observed velocities of broad-lined SNe Ic associated with gamma-ray bursts (GRBs) rather than to normal SN Ic velocities. Yet, this SN does not show the persistent broad lines that are typical of broad-lined SNe Ic. The host-galaxy characteristics are also consistent with GRB-SN hosts, and not with normal SN Ic hosts. By comparison with the spectroscopically similar SN 2004aw, we suggest that the observed properties of PTF12gzk indicate an initial progenitor mass of 25-35 M{sub Sun} and a large ((5-10) Multiplication-Sign 10{sup 51} erg) kinetic energy, the later being close to the regime of GRB-SN properties.« less

Alterations in coagulatory and fibrinolytic systems following an ultra-marathon.

PubMed

Kupchak, Brian R; Volk, Brittanie M; Kunces, Laura J; Kraemer, William J; Hoffman, Martin D; Phinney, Stephen D; Volek, Jeff S

2013-11-01

The aim of this study was to examine coagulatory and fibrinolytic responses to the Western States Endurance Run (WSER, June 23 to 24, 2012). The WSER is a 161-km (100 mile) trail foot race through the Sierra Nevada Mountains that involves 6,030 m of climb and 7,001 m of descent. We examined 12 men and 4 women [mean (95 % CI), age 44.6 years (38.7-50.6)] who completed the race (24.64 h; range 16.89-29.46). Blood samples were collected the morning before the race, immediately post-race, and 1 (D1) and 2 (D2) days post-race (corresponding to 51-54 h and 75-78 h from the start of the race, respectively). Hypercoagulable state was characterized by prothrombin fragment 1+2 (PTF 1+2) and thrombin-antithrombin complex (TAT). Fibrinolytic state was assessed by plasminogen activator inhibitor antigen (PAI-1 Ag), tissue plasminogen activator antigen (tPA Ag), and D-Dimer. Muscle damage was assessed by serum creatine kinase (CK) and myoglobin concentrations. Significant (P ≤ 0.05) increases were observed immediately post-race for thrombin generation markers, PTF 1+2 (3.9-fold) and TAT (2.4-fold); markers of fibrinolysis, tPA Ag (4.0-fold), PAI-1 Ag (4.5-fold), and D-Dimer (2.2-fold); and muscle damage markers, CK (154-fold) and myoglobin (114-fold). Most markers continued to be elevated at D1, as seen by PTF 1+2, TAT (1.5- and 1.3-fold increase at D1), and D-Dimer (2.5- and 2.1-fold increase at D1 and D2, respectively). Additionally, PTF 1+2:tPA and TAT:tPA ratios, which assessed balance between coagulation and fibrinolysis, were slightly, but significantly increased at D1 (69 and 36 %) and D2 (19 and 31 %). CK and myoglobin also remained elevated at D1 (54- and 7-fold) and D2 (25- and 2-fold) time points. The WSER produced extensive muscle damage and activated the coagulation and fibrinolytic systems. Since we observed a slight imbalance response between the two systems, a limited potential for thrombotic episodes is apparent in these highly trained athletes.

Probing gas and dust in the tidal tail of NGC 5221 with the type Ia supernova iPTF16abc

NASA Astrophysics Data System (ADS)

Ferretti, R.; Amanullah, R.; Goobar, A.; Petrushevska, T.; Borthakur, S.; Bulla, M.; Fox, O.; Freeland, E.; Fremling, C.; Hangard, L.; Hayes, M.

2017-10-01

Context. Type Ia supernovae (SNe Ia) can be used to address numerous questions in astrophysics and cosmology. Due to their well known spectral and photometric properties, SNe Ia are well suited to study gas and dust along the lines-of-sight to the explosions. For example, narrow Na I D and Ca II H&K absorption lines can be studied easily, because of the well-defined spectral continuum of SNe Ia around these features. Aims: We aim to study the gas and dust along the line-of-sight to iPTF16abc, which occurred in an unusual location, in a tidal arm, 80 kpc from centre of the galaxy NGC 5221. Methods: Using a time-series of high-resolution spectra, we have examined narrow Na I D and Ca II H&K absorption features for variations in time, which would be indicative for circumstellar (CS) matter. Furthermore, we have taken advantage of the well known photometric properties of SNe Ia to determine reddening due to dust along the line-of-sight. Results: From the lack of variations in Na I D and Ca II H&K, we determine that none of the detected absorption features originate from the CS medium of iPTF16abc. While the Na I D and Ca II H&K absorption is found to be optically thick, a negligible amount of reddening points to a small column of interstellar dust. Conclusions: We find that the gas along the line-of-sight to iPTF16abc is typical of what might be found in the interstellar medium (ISM) within a galaxy. It suggests that we are observing gas that has been tidally stripped during an interaction of NGC 5221 with one of its neighbouring galaxies in the past 109 yr. In the future, the gas clouds could become the locations of star formation. On a longer time scale, the clouds might diffuse, enriching the circum-galactic medium (CGM) with metals. The gas profile along the line-of-sight should be useful for future studies of the dynamics of the galaxy group containing NGC 5221. Based on observations collected at the European Organisation for Astronomical Research in the Southern Hemisphere under ESO DDT programme 297.D-5005(A), P. I. Ferretti.

Characteristics of picoplankton abundances during a Thalassiosira diporocyclus bloom in the Taiwan Bank in late winter.

PubMed

Jiang, Xin; Li, Jiajun; Ke, Zhixin; Xiang, Chenhui; Tan, Yehui; Huang, Liangmin

2017-04-15

To understand the variations of picoplankton (Prochlorococcus, Synechococcus, picoeukaryotes, and heterotrophic bacteria) abundances during diatom bloom, the distribution of picoplankton in the Taiwan Bank, South China Sea was investigated using flow cytometry during a Thalassiosira diporocyclus bloom in March 2016. The results indicated an abrupt abundance decrease for Prochlorococcus, Synechococcus, and picoeukaryotes within the bloom area while the abundance of heterotrophic bacteria showed no significant difference between the bloom and non-bloom areas. We found two sub-groups of heterotrophic bacteria: high- and low-nucleic acid content (HNA and LNA) bacteria with HNA dominated in the bloom area whereas LNA dominated in the non-bloom area. Among the picoplankton components, HNA represented the highest (61.1%) carbon biomass in the bloom area while picoeukaryotes represented the highest (37.6%) in the non-bloom area. Our findings implied that heterotrophic bacteria, especially HNA, played an essential role during the diatom bloom. Copyright © 2017 Elsevier Ltd. All rights reserved.

The Long Adventurous Journey of Rhombic Lip Cells in Jawed Vertebrates: A Comparative Developmental Analysis

PubMed Central

Wullimann, Mario F.; Mueller, Thomas; Distel, Martin; Babaryka, Andreas; Grothe, Benedikt; Köster, Reinhard W.

2011-01-01

This review summarizes vertebrate rhombic lip and early cerebellar development covering classic approaches up to modern developmental genetics which identifies the relevant differential gene expression domains and their progeny. Most of this information is derived from amniotes. However, progress in anamniotes, particularly in the zebrafish, has recently been made. The current picture suggests that rhombic lip and cerebellar development in jawed vertebrates (gnathostomes) share many characteristics. Regarding cerebellar development, these include a ptf1a expressing ventral cerebellar proliferation (VCP) giving rise to Purkinje cells and other inhibitory cerebellar cell types, and an atoh1 expressing upper rhombic lip giving rise to an external granular layer (EGL, i.e., excitatory granule cells) and an early ventral migration into the anterior rhombencephalon (cholinergic nuclei). As for the lower rhombic lip (LRL), gnathostome commonalities likely include the formation of precerebellar nuclei (mossy fiber origins) and partially primary auditory nuclei (likely convergently evolved) from the atoh1 expressing dorsal zone. The fate of the ptf1a expressing ventral LRL zone which gives rise to (excitatory cells of) the inferior olive (climbing fiber origin) and (inhibitory cells of ) cochlear nuclei in amniotes, has not been determined in anamniotes. Special for the zebrafish in comparison to amniotes is the predominant origin of anamniote excitatory deep cerebellar nuclei homologs (i.e., eurydendroid cells) from ptf1a expressing VCP cells, the sequential activity of various atoh1 paralogs and the incomplete coverage of the subpial cerebellar plate with proliferative EGL cells. Nevertheless, the conclusion that a rhombic lip and its major derivatives evolved with gnathostome vertebrates only and are thus not an ancestral craniate character complex is supported by the absence of a cerebellum (and likely absence of its afferent and efferent nuclei) in jawless fishes PMID:21559349

Finally, the Progenitor of the Type Ib iPTF13bvn

NASA Astrophysics Data System (ADS)

Van Dyk, Schulyer

2017-08-01

Supernovae (SNe) are among the most powerful events in the Universe and have a profound influence on galaxy evolution. Whereas we have been able to identify the luminous red supergiant progenitor stars of the most common core-collapse explosions, the hydrogen-rich Type II, the progenitors of hydrogen-poor Type Ib and Type Ic have been far more elusive. To strip away a SN Ib/c progenitor's outer layers, theoretical models with either (a) a highly-massive star with prodigious winds during the Wolf-Rayet phase or (b) a somewhat lower-mass star in a close, mass-exchange binary system have been proposed. One example exists so far of a progenitor identification, for the SN Ib iPTF13bvn in NGC 5806. Both models have been invoked to explain this event, although most evidence to date points toward the binary model. Our combined team observed this SN with WFC3 in Cycle 22, about 2 years after explosion, to investigate whether the progenitor had disappeared. As a result, we were able to report that indeed it had. We also attempted to better characterize the nature of the progenitor by subtracting our images from the pre-explosion HST data. Unfortunately, the old SN was apparently still conspicuously present. We therefore propose to reimage the SN site, when the SN should then be well below detectability, to produce high-quality templates of the host galaxy for subtraction. We can then finally fully reveal the progenitor and understand its true nature. iPTF13bvn is one of the most important historical SNe and will most probably be the best available case of a SN Ib progenitor for HST's remaining lifetime. It is imperative to understand the nature of this SN and its progenitor object.

THE DETECTION OF A SN IIn IN OPTICAL FOLLOW-UP OBSERVATIONS OF ICECUBE NEUTRINO EVENTS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Aartsen, M. G.; Abraham, K.; Ackermann, M.

2015-09-20

The IceCube neutrino observatory pursues a follow-up program selecting interesting neutrino events in real-time and issuing alerts for electromagnetic follow-up observations. In 2012 March, the most significant neutrino alert during the first three years of operation was issued by IceCube. In the follow-up observations performed by the Palomar Transient Factory (PTF), a Type IIn supernova (SN IIn) PTF12csy was found 0.°2 away from the neutrino alert direction, with an error radius of 0.°54. It has a redshift of z = 0.0684, corresponding to a luminosity distance of about 300 Mpc and the Pan-STARRS1 survey shows that its explosion time wasmore » at least 158 days (in host galaxy rest frame) before the neutrino alert, so that a causal connection is unlikely. The a posteriori significance of the chance detection of both the neutrinos and the SN at any epoch is 2.2σ within IceCube's 2011/12 data acquisition season. Also, a complementary neutrino analysis reveals no long-term signal over the course of one year. Therefore, we consider the SN detection coincidental and the neutrinos uncorrelated to the SN. However, the SN is unusual and interesting by itself: it is luminous and energetic, bearing strong resemblance to the SN IIn 2010jl, and shows signs of interaction of the SN ejecta with a dense circumstellar medium. High-energy neutrino emission is expected in models of diffusive shock acceleration, but at a low, non-detectable level for this specific SN. In this paper, we describe the SN PTF12csy and present both the neutrino and electromagnetic data, as well as their analysis.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Corsi, Alessandra; Gal-Yam, A.; Kulkarni, S. R.

Long duration γ-ray bursts are a rare subclass of stripped-envelope core-collapse supernovae (SNe) that launch collimated relativistic outflows (jets). All γ-ray-burst-associated SNe are spectroscopically Type Ic, with broad-lines, but the fraction of broad-lined SNe Ic harboring low-luminosity γ-ray bursts remains largely unconstrained. Some SNe should be accompanied by off-axis γ-ray burst jets that initially remain invisible, but then emerge as strong radio sources (as the jets decelerate). However, this critical prediction of the jet model for γ-ray bursts has yet to be verified observationally. Here, we present K. G. Jansky Very Large Array observations of 15 broad-lined SNe of Type Ic discovered by the Palomar Transient Factory in an untargeted manner. Most of the SNe in our sample exclude radio emission observationally similar to that of the radio-loud, relativistic SN 1998bw. We constrain the fraction of 1998bw-like broad-lined SNe Ic to bemore » $$\\lesssim 41 \\% $$ (99.865% confidence). Most of the events in our sample also exclude off-axis jets similar to GRB 031203 and GRB 030329, but we cannot rule out off-axis γ-ray bursts expanding in a low-density wind environment. Three SNe in our sample are detected in the radio. PTF11qcj and PTF14dby show late-time radio emission with average ejecta speeds of ≈0.3–0.4 c, on the dividing line between relativistic and "ordinary" SNe. The speed of PTF11cmh radio ejecta is poorly constrained. We estimate that $$\\lesssim 85 \\% $$ (99.865% confidence) of the broad-lined SNe Ic in our sample may harbor off-axis γ-ray bursts expanding in media with densities in the range probed by this study.« less

Life-cycle analysis of fuels from post-use non-recycled plastics

DOE PAGES

Benavides, Pahola Thathiana; Sun, Pingping; Han, Jeongwoo; ...

2017-04-27

Plastic-to-fuel (PTF) technology uses pyrolysis to convert plastic waste—especially non-recycled plastics (NRP)—into ultra-low sulfur diesel (ULSD) fuel. To assess the potential energy and environmental benefits associated with PTF technology, we calculated the energy, water consumption, and greenhouse gas emissions of NRP-derived ULSD and compared the results to those metrics for conventional ULSD fuel. For these analyses, we used the Greenhouse gases, Regulated Emissions and Energy use in Transportation (GREET®) model. Five companies provided pyrolysis process product yields and material and energy consumption data. Co-products of the process included char and fuel gas. Char can be landfilled, which, per the companymore » responses, is the most common practice for this co-product, or it may be sold as an energy product. Fuel gas can be combusted to internally generate process heat and electricity. Sensitivity analyses investigated the influence of co-product handling methodology, product yield, electric grid composition, and assumed efficiency of char combustion technology on life-cycle greenhouse gas emissions. The sensitivity analysis indicates that the GHG emissions would likely be reduced up to 14% when it is compared to conventional ULSD, depending on the co-product treatment method used. NRP-derived ULSD fuel could therefore be considered at a minimum carbon neutral with the potential to offer a modest GHG reduction. Moreover, this waste-derived fuel had 58% lower water consumption and up to 96% lower fossil fuel consumption than conventional ULSD fuel in the base case. In addition to the comparison of PTF fuels with conventional transportation fuels, we also compare the results with alternative scenarios for managing NRP including power generation and landfilling in the United States.« less

iPTF15eqv: Multiwavelength Exposé of a Peculiar Calcium-rich Transient

NASA Astrophysics Data System (ADS)

Milisavljevic, Dan; Patnaude, Daniel J.; Raymond, John C.; Drout, Maria R.; Margutti, Raffaella; Kamble, Atish; Chornock, Ryan; Guillochon, James; Sanders, Nathan E.; Parrent, Jerod T.; Lovisari, Lorenzo; Chilingarian, Igor V.; Challis, Peter; Kirshner, Robert P.; Penny, Matthew T.; Itagaki, Koichi; Eldridge, J. J.; Moriya, Takashi J.

2017-09-01

The progenitor systems of the class of “Ca-rich transients” is a key open issue in time domain astrophysics. These intriguing objects exhibit unusually strong calcium line emissions months after explosion, fall within an intermediate luminosity range, are often found at large projected distances from their host galaxies, and may play a vital role in enriching galaxies and the intergalactic medium. Here we present multiwavelength observations of iPTF15eqv in NGC 3430, which exhibits a unique combination of properties that bridge those observed in Ca-rich transients and SNe Ib/c. iPTF15eqv has among the highest [Ca II]/[O I] emission line ratios observed to date, yet is more luminous and decays more slowly than other Ca-rich transients. Optical and near-infrared photometry and spectroscopy reveal signatures consistent with the supernova explosion of a ≲ 10 {M}⊙ star that was stripped of its H-rich envelope via binary interaction. Distinct chemical abundances and ejecta kinematics suggest that the core collapse occurred through electron-capture processes. Deep limits on possible radio emission made with the Jansky Very Large Array imply a clean environment (n ≲ 0.1 cm-3) within a radius of ˜ {10}17 cm. Chandra X-ray Observatory observations rule out alternative scenarios involving the tidal disruption of a white dwarf (WD) by a black hole, for masses >100 M ⊙. Our results challenge the notion that spectroscopically classified Ca-rich transients only originate from WD progenitor systems, complicate the view that they are all associated with large ejection velocities, and indicate that their chemical abundances may vary widely between events.

A magnetar model for the hydrogen-rich super-luminous supernova iPTF14hls

NASA Astrophysics Data System (ADS)

Dessart, Luc

2018-02-01

Transient surveys have recently revealed the existence of H-rich super-luminous supernovae (SLSN; e.g., iPTF14hls, OGLE-SN14-073) that are characterized by an exceptionally high time-integrated bolometric luminosity, a sustained blue optical color, and Doppler-broadened H I lines at all times. Here, I investigate the effect that a magnetar (with an initial rotational energy of 4 × 1050 erg and field strength of 7 × 1013 G) would have on the properties of a typical Type II supernova (SN) ejecta (mass of 13.35 M⊙, kinetic energy of 1.32 × 1051 erg, 0.077 M⊙ of 56Ni) produced by the terminal explosion of an H-rich blue supergiant star. I present a non-local thermodynamic equilibrium time-dependent radiative transfer simulation of the resulting photometric and spectroscopic evolution from 1 d until 600 d after explosion. With the magnetar power, the model luminosity and brightness are enhanced, the ejecta is hotter and more ionized everywhere, and the spectrum formation region is much more extended. This magnetar-powered SN ejecta reproduces most of the observed properties of SLSN iPTF14hls, including the sustained brightness of ‑18 mag in the R band, the blue optical color, and the broad H I lines for 600 d. The non-extreme magnetar properties, combined with the standard Type II SN ejecta properties, offer an interesting alternative to the pair-unstable super-massive star model recently proposed, which involves a highly energetic and super-massive ejecta. Hence, such Type II SLSNe may differ from standard Type II SNe exclusively through the influence of a magnetar.

Life-cycle analysis of fuels from post-use non-recycled plastics

DOE Office of Scientific and Technical Information (OSTI.GOV)

Benavides, Pahola Thathiana; Sun, Pingping; Han, Jeongwoo

Plastic-to-fuel (PTF) technology uses pyrolysis to convert plastic waste—especially non-recycled plastics (NRP)—into ultra-low sulfur diesel (ULSD) fuel. To assess the potential energy and environmental benefits associated with PTF technology, we calculated the energy, water consumption, and greenhouse gas emissions of NRP-derived ULSD and compared the results to those metrics for conventional ULSD fuel. For these analyses, we used the Greenhouse gases, Regulated Emissions and Energy use in Transportation (GREET®) model. Five companies provided pyrolysis process product yields and material and energy consumption data. Co-products of the process included char and fuel gas. Char can be landfilled, which, per the companymore » responses, is the most common practice for this co-product, or it may be sold as an energy product. Fuel gas can be combusted to internally generate process heat and electricity. Sensitivity analyses investigated the influence of co-product handling methodology, product yield, electric grid composition, and assumed efficiency of char combustion technology on life-cycle greenhouse gas emissions. The sensitivity analysis indicates that the GHG emissions would likely be reduced up to 14% when it is compared to conventional ULSD, depending on the co-product treatment method used. NRP-derived ULSD fuel could therefore be considered at a minimum carbon neutral with the potential to offer a modest GHG reduction. Moreover, this waste-derived fuel had 58% lower water consumption and up to 96% lower fossil fuel consumption than conventional ULSD fuel in the base case. In addition to the comparison of PTF fuels with conventional transportation fuels, we also compare the results with alternative scenarios for managing NRP including power generation and landfilling in the United States.« less

Spectroscopic and Photometric Analysis of the HW Vir Star PTF1 J011339.09+225739.1

NASA Astrophysics Data System (ADS)

Wolz, Maximilian; Kupfer, Thomas; Drechsel, Horst; Heber, Ulrich; Irrgang, Andreas; Hermes, J. J.; Bloemen, Steven; Levitan, David; Dhillon, Vik; Marsh, TomR.

2018-05-01

HW Vir systems are rare eclipsing binary systems including a subdwarf B star (sdB) with a faint companion, mostly M-dwarfs. Up to now, 19 HW Vir systems have been published, three of them with substellar companions. We report the spectroscopic as well as photometric observation of the eclipsing sdB binary PTF1 J011339.09+225739.1 (PTF1 J0113) in a close (a=0.722 ± 0.023 R⊙), short period (P = 0.0933731(3)d) orbit. A quantitative spectral analysis of the sdB yields Te.=29280 ± 720 K, log(g)=5.77 ± 0.09 dex, and log(y)=-2.32 ± 0.12. The circular orbital velocity of the sdB of K1=74.2 ± 1.7 km s-1 is derived from the radial velocity curve. Except for the strong reflection effect, no other light contribution of the companion could be detected. The light curves - recorded with ULTRACAM - were analyzed using the Wilson-Devinney code. We find an inclination angle of i=79.88 ± 0.18∘. Because our first attempts to determine q failed, we calculated large grids of synthetic lightcurves for several mass ratios. Because of degeneracy, good solutions for different mass ratios were found - the one at q = 0.24 is consistent with the sdB's canonical mass (MsdB = 0.47 M⊙). Accordingly, the mass of the companion is M2=0.112 ± 0.003 M⊙. The radii of the two components were also derived: RsdB=0.178 ± 0.006 R⊙ and R2 = 0.158 ± 0.009 R⊙. Thus, the results for the secondary are consistent with an M-dwarf as secondary

Phytoplankton-Associated Bacterial Community Composition and Succession during Toxic Diatom Bloom and Non-Bloom Events

PubMed Central

Sison-Mangus, Marilou P.; Jiang, Sunny; Kudela, Raphael M.; Mehic, Sanjin

2016-01-01

Pseudo-nitzschia blooms often occur in coastal and open ocean environments, sometimes leading to the production of the neurotoxin domoic acid that can cause severe negative impacts to higher trophic levels. Increasing evidence suggests a close relationship between phytoplankton bloom and bacterial assemblages, however, the microbial composition and succession during a bloom process is unknown. Here, we investigate the bacterial assemblages before, during and after toxic and non-toxic Pseudo-nitzschia blooms to determine the patterns of bacterial succession in a natural bloom setting. Opportunistic sampling of bacterial community profiles were determined weekly at Santa Cruz Municipal Wharf by 454 pyrosequencing and analyzed together with domoic acid levels, phytoplankton community and biomass, nutrients and temperature. We asked if the bacterial communities are similar between bloom and non-bloom events and if domoic acid or the presence of toxic algal species acts as a driving force that can significantly structure phytoplankton-associated bacterial communities. We found that bacterial diversity generally increases when Pseudo-nitzschia numbers decline. Furthermore, bacterial diversity is higher when the low-DA producing P. fraudulenta dominates the algal bloom while bacterial diversity is lower when high-DA producing P. australis dominates the algal bloom, suggesting that the presence of algal toxin can structure bacterial community. We also found bloom-related succession patterns among associated bacterial groups; Gamma-proteobacteria, were dominant during low toxic P. fraudulenta blooms comprising mostly of Vibrio spp., which increased in relative abundance (6–65%) as the bloom progresses. On the other hand, Firmicutes bacteria comprising mostly of Planococcus spp. (12–86%) dominate during high toxic P. australis blooms, with the bacterial assemblage showing the same bloom-related successional patterns in three independent bloom events. Other environmental variables such as nitrate and phosphate and temperature appear to influence some low abundant bacterial groups as well. Our results suggest that phytoplankton-associated bacterial communities are strongly affected not just by phytoplankton bloom in general, but also by the type of algal species that dominates in the natural bloom. PMID:27672385

Life-history stages of natural bloom populations and the bloom dynamics of a tropical Asian ribotype of Alexandrium minutum.

PubMed

Lau, Winnie Lik Sing; Law, Ing Kuo; Liow, Guat Ru; Hii, Kieng Soon; Usup, Gires; Lim, Po Teen; Leaw, Chui Pin

2017-12-01

In 2015, a remarkably high density bloom of Alexandrium minutum occurred in Sungai Geting, a semi-enclosed lagoon situated in the northeast of Peninsular Malaysia, causing severe discoloration and contaminated the benthic clams (Polymesoda). Plankton and water samples were collected to investigate the mechanisms of bloom development of this toxic species. Analysis of bloom samples using flow cytometry indicated that the bloom was initiated by the process of active excystment, as planomycetes (>4C cells) were observed in the early stage of the bloom. Increase in planozygotes (2C cells) was evident during the middle stage of the bloom, coinciding with an abrupt decrease in salinity and increase of temperature. The bloom was sustained through the combination of binary division of vegetative cells, division of planozygotes, and cyst germination through continuous excystment. Nutrient depletion followed by precipitation subsequently caused the bloom to terminate. This study provides the first continuous record of in situ life-cycle stages of a natural bloom population of A. minutum through a complete bloom cycle. The event has provided a fundamental understanding of the pelagic life-cycle stages of this tropical dinoflagellate, and demonstrated a unique bloom development characteristic shared among toxic Alexandrium species in coastal embayments. Copyright © 2017 Elsevier B.V. All rights reserved.

Two-decade reconstruction of algal blooms in China's Lake Taihu.

PubMed

Duan, Hongtao; Ma, Ronghua; Xu, Xiaofeng; Kong, Fanxiang; Zhang, Shouxuan; Kong, Weijuan; Hao, Jingyan; Shang, Linlin

2009-05-15

The algal blooming in the inland lakes has become a critically important issue for its impacts not only on local natural and social environments, but also on global human community. However, the occurrences of blooming on larger spatial scale and longer time scale have rarely been studied. As the third largest freshwater lake in China, Lake Taihu has drawn increasing attention from both public and scientific communities concerning its degradation. Using available satellite images, we reconstructed the spatial and temporal patterns of algal blooms in Lake Taihu through the pasttwo decades. The blooming characteristics over the past two decades were examined with the dynamic of initial blooming date being highlighted. The initial blooming dates were gradually becoming later and later from 1987 to 1997. Since 1998, however, the initial blooming date came earlier and earlier year by year, with approximately 11.42 days advancement per year. From 1987 to 2007, the annual duration of algal blooms lengthened year by year, in line with the substantial increases in the occurrences of algal blooms in spring and summer months. The algal blooms usually occur in northern bays and spread to center and south parts of Lake Taihu. The increases in previous winter's mean daily minimum temperature partially contributed to the earlier blooming onset. However, human activities, expressed as total gross domestic product (GDP) and population, outweighed the climatic contribution on the initial blooming date and blooming duration. This study may provide insights for the policy makers who try to curb the algal blooming and improve the water quality of inland freshwater lakes.

Detecting Nova Shells around known Cataclysmic Variable systems

NASA Astrophysics Data System (ADS)

Xhakaj, Enia; Kupfer, Thomas; Prince, Thomas A.

2017-01-01

Nova shells are hydrogen-rich nebulae around Cataclysmic Variables that are created when a Nova outburst takes place. Learning more about Nova shells can help us get a better understanding of the long-term evolution of white dwarfs in active Cataclysmic Variables. In this project, we present the search for Nova shells around 1700 Cataclysmic Variables, using Hα images from the Palomar Transient Factory (PTF) survey. The PTF Hα survey started in 2009 using the 48’’ Oschin telescope at Palomar Observatory and is the first of its type covering the whole northern hemisphere while reaching 18 mags in 60 seconds of exposure. We concentrated our search on the IAU catalogue of Historical Novae, as well as on the SDSS and the Ritter-Kolb catalogue of Cataclysmic Variables. We numerically analyzed radial profiles centered on the target sources to search for excess emission potentially associated with the shells. Out of 1700 Cataclysmic Variables present in these catalogues, we detected 25 Nova shells, out of which 20 are not observed before.

Fermi Large Area Telescope Detection of Gamma-Ray Emission from the Direction of Supernova iPTF14hls

NASA Astrophysics Data System (ADS)

Yuan, Qiang; Liao, Neng-Hui; Xin, Yu-Liang; Li, Ye; Fan, Yi-Zhong; Zhang, Bing; Hu, Hong-Bo; Bi, Xiao-Jun

2018-02-01

The remnant of a supernova explosion is widely believed to be the acceleration site of high-energy cosmic-ray particles. The acceleration timescale is, however, typically very long. Here, we report the detection of a variable γ-ray source with the Fermi Large Area Telescope, which is positionally and temporally consistent with a peculiar supernova, iPTF14hls. A quasi-stellar object SDSS J092054.04+504251.5, which is probably a blazar candidate according to the infrared data, is found in the error circle of the γ-ray source. More data about the γ-ray source and SDSS J092054.04+504251.5 are needed to confirm their association. On the other hand, if the association between the γ-ray source and the supernova is confirmed, this would be the first time detecting high-energy γ-ray emission from a supernova, suggesting very fast particle acceleration by supernova explosions.

The antibiotic resistome of free-living and particle-attached bacteria under a reservoir cyanobacterial bloom.

PubMed

Guo, Yunyan; Liu, Min; Liu, Lemian; Liu, Xuan; Chen, Huihuang; Yang, Jun

2018-05-04

In freshwater systems, both antibiotic resistance genes (ARGs) and cyanobacterial blooms attract global public health concern. Cyanobacterial blooms can greatly impact bacterial taxonomic communities, but very little is known about the influence of the blooms on antibiotic resistance functional community. In this study, the ARGs in both free-living (FL) and particle-attached (PA) bacteria under bloom and non-bloom conditions were simultaneously investigated in a subtropical reservoir using high-throughput approaches. In total, 145 ARGs and 9 mobile genetic elements (MGEs) were detected. The most diverse and dominant of which (68.93%) were multidrug resistance genes and efflux pump mechanism. The richness of ARGs in both FL and PA bacteria was significantly lower during the bloom period compared with non-bloom period. The abundance of ARGs in FL bacteria was significantly lower under bloom condition than in the non-bloom period, but the abundance of ARGs in PA bacteria stayed constant. More importantly, the resistant functional community in PA bacteria was more strongly influenced by the cyanobacterial bloom than in the FL bacteria, although >96% ARGs were shared in both FL and PA bacteria or both bloom and non-bloom periods. We also compared the community compositions between taxonomy and function, and found antibiotic resistant communities were highly variable and exhibited lower similarity between bloom and non-bloom periods than seen in the taxonomic composition, with an exception of FL bacteria. Altogether, cyanobacterial blooms appear to have stronger inhibitory effect on ARG abundance in FL bacteria, and stronger influence on antibiotic resistant community composition in PA bacteria. Our results further suggested that both neutral and selective processes interactively affected the ARG composition dynamics of the FL and PA bacteria. However, the antibiotic resistant community of FL bacteria exhibited a higher level of temporal stochasticity following the bloom event than PA bacteria. Therefore, we emphasized the bacterial lifestyles as an important mechanism, giving rise to different responses of antibiotic resistant community to the cyanobacterial bloom. Copyright © 2018 Elsevier Ltd. All rights reserved.

Remote Sensing Marine Ecology: Wind-driven algal blooms in the open oceans and their ecological impacts

NASA Astrophysics Data System (ADS)

Tang, DanLing

2016-07-01

Algal bloom not only can increase the primary production but also could result in negative ecological consequence, e.g., Harmful Algal Blooms (HABs). According to the classic theory for the formation of algal blooms "critical depth" and "eutrophication", oligotrophic sea area is usually difficult to form a large area of algal blooms, and actually the traditional observation is only sporadic capture to the existence of algal blooms. Taking full advantage of multiple data of satellite remote sensing, this study: 1), introduces "Wind-driven algal blooms in open oceans: observation and mechanisms" It explained except classic coastal Ekman transport, the wind through a variety of mechanisms affecting the formation of algal blooms. Proposed a conceptual model of "Strong wind -upwelling-nutrient-phytoplankton blooms" in Western South China Sea (SCS) to assess role of wind-induced advection transport in phytoplankton bloom formation. It illustrates the nutrient resources that support long-term offshore phytoplankton blooms in the western SCS; 2), Proposal of the theory that "typhoons cause vertical mixing, induce phytoplankton blooms", and quantify their important contribution to marine primary production; Proposal a new ecological index for typhoon. Proposed remote sensing inversion models. 3), Finding of the spatial and temporaldistributions pattern of harmful algal bloom (HAB)and species variations of HAB in the South Yellow Sea and East China Sea, and in the Pearl River estuary, and their oceanic dynamic mechanisms related with monsoon; The project developed new techniques and generated new knowledge, which significantly improved understanding of the formation mechanisms of algal blooms. 1), It proposed "wind-pump" mechanism integrates theoretical system combing "ocean dynamics, development of algal blooms, and impact on primary production", which will benefit fisheries management. 2), A new interdisciplinary subject "Remote Sensing Marine Ecology"(RSME) has been developed via these achievements.

[Dynamics of bacterial community during the bloom caused by Skeletonema costatum and Akashiwo sanguinea in Xiamen sea area].

PubMed

Li, Yi; Yang, Caiyun; Li, Dong; Tian, Yun; Zheng, Tianling

2012-10-04

To investigate the dynamics of bacterial community in Xiamen sea during the bloom mainly caused by Skeletonema costatum and Akashiwo sanguine in August 2011. Bacterial community structures of samples from two bloom sites and one non-bloom site were evaluated by PCR-DGGE (Denaturing gradient gel electrophoresis, DGGE). The genetic diversity of bacterial community was analyzed based on the DGGE fingerprint. The correlation between bacterial community and environmental parameters was studied by Canoco. The bacterial community was largely related to pH and N/P during the start-up stage of the bloom; while in the demise stage, it was mostly correlated to salinity and temperature. According to the results of sequence analysis of DGGE dominant bands, Gammaproteobacteria accounted for 47.7% during the bloom and Pseudoalteromonas, Pseudomonas, Alteromonas, Hydrogenophaga, Actibacter and Oleibacter were dominant genus in bacterial community. The Shannon-Weaver diversity index showed that the diversity of bacterial community in bloom site increased firstly and then decreased during this bloom. Hydrogenophaga was dominant in the start-up stage of bloom, while Pseudomonas and Pseudoalteromonas were dominant in the demise stage of bloom. The diversity of attached bacteria and free-living bacteria in bloom sites reached maximum in the same day (the concentration of algae was high) , both of them changed greatly during the bloom while the environment factors which correlated with the two communities were different. It is the first report about dynamics of bacterial community during the bloom caused by several algae together. This work is helpful to understand the dynamics of bacterial community during the bloom, and provides a theoretical basis for bloom's control in the future.

Microbial control of diatom bloom dynamics in the open ocean

NASA Astrophysics Data System (ADS)

Boyd, Philip W.; Strzepek, Robert; Chiswell, Steve; Chang, Hoe; DeBruyn, Jennifer M.; Ellwood, Michael; Keenan, Sean; King, Andrew L.; Maas, Elisabeth W.; Nodder, Scott; Sander, Sylvia G.; Sutton, Philip; Twining, Benjamin S.; Wilhelm, Steven W.; Hutchins, David A.

2012-09-01

Diatom blooms play a central role in supporting foodwebs and sequestering biogenic carbon to depth. Oceanic conditions set bloom initiation, whereas both environmental and ecological factors determine bloom magnitude and longevity. Our study reveals another fundamental determinant of bloom dynamics. A diatom spring bloom in offshore New Zealand waters was likely terminated by iron limitation, even though diatoms consumed <1/3 of the mixed-layer dissolved iron inventory. Thus, bloom duration and magnitude were primarily set by competition for dissolved iron between microbes and small phytoplankton versus diatoms. Significantly, such a microbial mode of control probably relies both upon out-competing diatoms for iron (i.e., K-strategy), and having high iron requirements (i.e., r-strategy). Such resource competition for iron has implications for carbon biogeochemistry, as, blooming diatoms fixed three-fold more carbon per unit iron than resident non-blooming microbes. Microbial sequestration of iron has major ramifications for determining the biogeochemical imprint of oceanic diatom blooms.

IRSA

Science.gov Websites

Ipac_logo NASA/IPAC Infrared Science Archive Search for Source Search Radius 10 deg arcmin arcsec Guide for Solar System Observers Search Catalog: WISE 2MASS Spitzer Planck Herschel Gaia COSMOS PTF IRAS MSX AKARI Bolocam USNO DENIS Composite_Catalogs Contributed_Data_Sets INTERNALS Search Catalogs

Enhancing PTFs with remotely sensed data for multi-scale soil water retention estimation

NASA Astrophysics Data System (ADS)

Jana, Raghavendra B.; Mohanty, Binayak P.

2011-03-01

SummaryUse of remotely sensed data products in the earth science and water resources fields is growing due to increasingly easy availability of the data. Traditionally, pedotransfer functions (PTFs) employed for soil hydraulic parameter estimation from other easily available data have used basic soil texture and structure information as inputs. Inclusion of surrogate/supplementary data such as topography and vegetation information has shown some improvement in the PTF's ability to estimate more accurate soil hydraulic parameters. Artificial neural networks (ANNs) are a popular tool for PTF development, and are usually applied across matching spatial scales of inputs and outputs. However, different hydrologic, hydro-climatic, and contaminant transport models require input data at different scales, all of which may not be easily available from existing databases. In such a scenario, it becomes necessary to scale the soil hydraulic parameter values estimated by PTFs to suit the model requirements. Also, uncertainties in the predictions need to be quantified to enable users to gauge the suitability of a particular dataset in their applications. Bayesian Neural Networks (BNNs) inherently provide uncertainty estimates for their outputs due to their utilization of Markov Chain Monte Carlo (MCMC) techniques. In this paper, we present a PTF methodology to estimate soil water retention characteristics built on a Bayesian framework for training of neural networks and utilizing several in situ and remotely sensed datasets jointly. The BNN is also applied across spatial scales to provide fine scale outputs when trained with coarse scale data. Our training data inputs include ground/remotely sensed soil texture, bulk density, elevation, and Leaf Area Index (LAI) at 1 km resolutions, while similar properties measured at a point scale are used as fine scale inputs. The methodology was tested at two different hydro-climatic regions. We also tested the effect of varying the support scale of the training data for the BNNs by sequentially aggregating finer resolution training data to coarser resolutions, and the applicability of the technique to upscaling problems. The BNN outputs are corrected for bias using a non-linear CDF-matching technique. Final results show good promise of the suitability of this Bayesian Neural Network approach for soil hydraulic parameter estimation across spatial scales using ground-, air-, or space-based remotely sensed geophysical parameters. Inclusion of remotely sensed data such as elevation and LAI in addition to in situ soil physical properties improved the estimation capabilities of the BNN-based PTF in certain conditions.

Time-of-flight neutron powder diffraction study on the third row transition metal hexafluorides WF6, OsF6, and PtF6

NASA Astrophysics Data System (ADS)

Marx, R.; Seppelt, K.; Ibberson, R. M.

1996-05-01

A neutron diffraction study on the third-row transition metal hexafluorides MF6 (M≡W, Os, Pt) has been performed using the high resolution neutron powder diffractometer (HRPD) at the spallation source ISIS, England. The previously unknown structures of the low-temperature phases of OsF6 and PtF6 are reported. WF6, OsF6, and PtF6, which exhibit a (5dt2g)0, (5dt2g)2, and (5dt2g)4 electronic configuration, respectively, are found to be isostructural and crystallize in the UF6 structure, space group Pmnb, (No. 62). The geometry of the MF6 molecules is to good approximation octahedral for each compound, the mean M-F bond length increasing only slightly from 182.5 (W) to 185.0 (Pt). For WF6 deviations from ideal octahedral geometry are only marginally significant [181.8(2) to 183.2(2) pm] and may be interpreted on the basis of packing effects. Deviations for the d2 complex OsF6 are somewhat larger [181.5(2) to 184.4(3) pm] and may be assumed to be caused by packing effects essentially the same as for WF6, in addition to a first-order Jahn-Teller effect arising from the (5dt2g)2 electronic configuration. While eliminating the effects of packing by a comparison of individual M-F bond lengths for WF6 and OsF6, the OsF6 molecule shows to have D4h symmetry with two apical M-F bonds about 1.8 pm longer than the four equatorial bonds as a result of the Jahn-Teller distortion. Only small deviations from ideal octahedral geometry [184.4(3) to 185.8(3) pm] are found for the d4 complex PtF6. Within the series W to Pt a substantial shortening of the F...F van der Waals contact distances is observed. This shortening more than compensates for the increase in the M-F bond lengths and leads to unit cell volumes and cell parameters decreasing continuously from W to Pt. The variation of F...F contact distances and M-F bond lengths may be rationalized in terms of polarization of the F-ligands in the field of the highly charged nuclei of the central atoms which are only incompletely shielded by the 5d electrons.

Seasonal cooling and blooming in tropical oceans

NASA Astrophysics Data System (ADS)

Longhurst, Alan

1993-11-01

The relative importance of tropical pelagic algal blooms in not yet fully appreciated and the way they are induced not well understood. The tropical Atlantic supports pelagic blooms together equivalent to the North Atlantic spring bloom. These blooms are driven by thermocline tilting, curl of wind stress and eddy upwelling as the ocean responds to intensified basin-scale winds in boreal summer. The dimensions of the Pacific Ocean are such that seasonal thermocline tilting does not occur, and nutrient conditions are such that tilting might not induce bloom, in any case. Divergence at the equator is a separate process that strengthens the Atlantic bloom, is more prominent in the eastern Pacific, and in the Indian Ocean induces a bloom only in the western part of the ocean. Where western jet currents are retroflected from the coast off Somalia and Brazil, eddy upwelling induces prominent blooms. In the eastward flow of the northern equatorial countercurrents, positive wind curl stress induces Ekman pumping and the induction of algal blooms aligned with the currents. Some apparent algal bloom, such as that seen frequently in CZCS images westwards from Senegal, must be due to interference from airborne dust.

Succession of Pelagic Organisms in the Size Range 0·5-200 μm During a Diatom Bloom in Otsuchi Bay, Japan

NASA Astrophysics Data System (ADS)

Tsuda, Atsushi; Sugisaki, Hiroya; Takahashi, Koji; Furuya, Ken

1994-08-01

The succession of pelagic organisms in the approximate size range 0·5-200 μm was investigated during a spring diatom bloom in Otsuchi Bay on the Pacific coast of northern Japan. The diatom bloom lasted 3 weeks in the middle of the period examined. The study period was divided into three phases: pre-bloom, bloom and post-bloom. Mesodinium rubrum, an autotrophic ciliate, was abundant in the pre-bloom phase, when vertical mixing was intense. During the bloom phase, the biomass of organisms other than diatoms themselves and bacteria was depressed. A bacterial peak was observed 4 days after the diatom peak and peaks of nano-autotrophs and -heterotrophs occurred after 14 days. Phototrophic picoplankton showed a biomass peak at the same time as nanoplankton. Grazing on diatoms by the copepod population was shown by the occurrences of faecal pellets and copepod nauplii during and after the bloom phase. These results suggest that production of copepods and bacteria depended only on the diatom bloom directly, and that heterotrophic micro-protista depended on the production of pico- and nano-autotrophs in the post-bloom phase.

Trichodesmium erythraeum (Ehrenberg) bloom along the southwest coast of India (Arabian Sea) and its impact on trace metal concentrations in seawater

NASA Astrophysics Data System (ADS)

Krishnan, Anoop A.; Krishnakumar, P. K.; Rajagopalan, M.

2007-02-01

The incidence of a large scale Trichodesmium erythraeum bloom along the southwest coast of India (Arabian Sea) observed in May 2005 is reported. Around 4802 filaments of T. erythraeum ml -1 seawater was observed and a colony consisted of 3.6 × 10 5 cells. The bloom was predominant off Suratkal (12° 59'N and 74° 31'E) with a depth of about 47 m, covering an area of 7 km in length and 2 km width. The concentrations of Zinc, Cadmium, Lead, Copper, Nickel and Cobalt were determined in samples collected from the bloom and non-bloom sites using stripping voltammetry. The observed hydrographical and meteorological parameters were found to be favorable for the bloom. The concentrations of Zinc, Cadmium and Nickel were found to be higher at bloom stations, while the concentrations of Lead, Copper and Cobalt were found to be very low at bloom stations. Elevated concentrations of Cadmium and Cobalt were observed at Valappad mainly due to the decomposition of detrital material produced in the bloom. Statistically significant differences ( P > 0.01) in metal concentrations between the bloom and non-bloom stations were not observed except for Copper. Metals such as Lead, Copper and Cobalt were removed from the seawater at all places where bloom was observed. Cadmium was found to be slowly released during the decaying process of the bloom.

How physiological and physical processes contribute to the phenology of cyanobacterial blooms in large shallow lakes: A new Euler-Lagrangian coupled model.

PubMed

Feng, Tao; Wang, Chao; Wang, Peifang; Qian, Jin; Wang, Xun

2018-09-01

Cyanobacterial blooms have emerged as one of the most severe ecological problems affecting large and shallow freshwater lakes. To improve our understanding of the factors that influence, and could be used to predict, surface blooms, this study developed a novel Euler-Lagrangian coupled approach combining the Eulerian model with agent-based modelling (ABM). The approach was subsequently verified based on monitoring datasets and MODIS data in a large shallow lake (Lake Taihu, China). The Eulerian model solves the Eulerian variables and physiological parameters, whereas ABM generates the complete life cycle and transport processes of cyanobacterial colonies. This model ensemble performed well in fitting historical data and predicting the dynamics of cyanobacterial biomass, bloom distribution, and area. Based on the calculated physical and physiological characteristics of surface blooms, principal component analysis (PCA) captured the major processes influencing surface bloom formation at different stages (two bloom clusters). Early bloom outbreaks were influenced by physical processes (horizontal transport and vertical turbulence-induced mixing), whereas buoyancy-controlling strategies were essential for mature bloom outbreaks. Canonical correlation analysis (CCA) revealed the combined actions of multiple environment variables on different bloom clusters. The effects of buoyancy-controlling strategies (ISP), vertical turbulence-induced mixing velocity of colony (VMT) and horizontal drift velocity of colony (HDT) were quantitatively compared using scenario simulations in the coupled model. VMT accounted for 52.9% of bloom formations and maintained blooms over long periods, thus demonstrating the importance of wind-induced turbulence in shallow lakes. In comparison, HDT and buoyancy controlling strategies influenced blooms at different stages. In conclusion, the approach developed here presents a promising tool for understanding the processes of onshore/offshore algal blooms formation and subsequent predicting. Copyright © 2018 Elsevier Ltd. All rights reserved.

Intraspecific bloom succession in the harmful dinoflagellate Cochlodinium polykrikoides (Dinophyceae) extended the blooming period in Korean coastal waters in 2009.

PubMed

Park, Bum Soo; Kim, Jin Ho; Kim, Joo-Hwan; Baek, Seung Ho; Han, Myung-Soo

2018-01-01

Although there have been extensive studies on dinoflagellate blooms in recent decades, the mechanism that allows the maintenance of blooms over long periods remains uncertain, and studies on genetically differentiated subpopulations may provide insights into this mechanism. In this study, the influence of two genetically distinct subpopulations of the dinoflagellate Cochlodinium polykrikoides, referred to as Group I and IV, on bloom duration in Korean coastal waters (KCW) was examined using a quantitative PCR (qPCR) assay. In this study, a C. polykrikoides bloom occurred over a longer period in 2009 (49 days), whereas the bloom period was shorter in 2010 (35 days). The qPCR results indicate that intraspecific bloom succession between Groups I and IV occurred in 2009, whereas only a single subpopulation (Group I) was responsible for the bloom in 2010. Based on the statistical analysis, the Group I and Group IV blooms occurred under significantly different environmental conditions (p ≤ 0.05) in terms of water temperature, pH, and phosphate concentration, and these subpopulations exhibited significantly different relationships with environmental factors, particularly water temperature (p < 0.01). This variability may allow blooms to continue through intraspecific bloom succession even after environmental conditions change. Southern KCW are affected by outer regions via the Tsushima Warm Current (TWC) every summer. Group IV (≤1108 ± 69 cells L -1 ) was primarily observed along the route of the TWC in summer 2009, when the bloom of this subpopulation occurred in southern KCW. These results suggest that Group IV transported via the TWC may have influenced the bloom dynamics of this subpopulation in summer 2009. Copyright © 2017 Elsevier B.V. All rights reserved.

Effect of tomato extract supplementation against high-fat diet-induced hepatic lesions

USDA-ARS?s Scientific Manuscript database

Higher intake of tomatoes or tomato-based products has been associated with lower risk for liver cancer. In this study, we investigated the effects of supplementing tomato extract (TE), which contains mainly lycopene (LY) and less amounts of its precursors, phytoene (PT) and phytofluene (PTF) agains...

Phytoplankton blooms in estuarine and coastal waters: Seasonal patterns and key species

USGS Publications Warehouse

Carstensen, Jacob; Klais, Riina; Cloern, James E.

2015-01-01

Phytoplankton blooms are dynamic phenomena of great importance to the functioning of estuarine and coastal ecosystems. We analysed a unique (large) collection of phytoplankton monitoring data covering 86 coastal sites distributed over eight regions in North America and Europe, with the aim of investigating common patterns in the seasonal timing and species composition of the blooms. The spring bloom was the most common seasonal pattern across all regions, typically occurring early (February–March) at lower latitudes and later (April–May) at higher latitudes. Bloom frequency, defined as the probability of unusually high biomass, ranged from 5 to 35% between sites and followed no consistent patterns across gradients of latitude, temperature, salinity, water depth, stratification, tidal amplitude or nutrient concentrations. Blooms were mostly dominated by a single species, typically diatoms (58% of the blooms) and dinoflagellates (19%). Diatom-dominated spring blooms were a common feature in most systems, although dinoflagellate spring blooms were also observed in the Baltic Sea. Blooms dominated by chlorophytes and cyanobacteria were only common in low salinity waters and occurred mostly at higher temperatures. Key bloom species across the eight regions included the diatoms Cerataulina pelagica and Dactyliosolen fragilissimus and dinoflagellates Heterocapsa triquetra and Prorocentrum cordatum. Other frequent bloom-forming taxa were diatom genera Chaetoceros, Coscinodiscus, Skeletonema, and Thalassiosira. Our meta-analysis shows that these 86 estuarine-coastal sites function as diatom-producing systems, the timing of that production varies widely, and that bloom frequency is not associated with environmental factors measured in monitoring programs. We end with a perspective on the limitations of conclusions derived from meta-analyses of phytoplankton time series, and the grand challenges remaining to understand the wide range of bloom patterns and processes that select species as bloom dominants in coastal waters.

Wind-driven marine phytoplank blooms: Satellite observation and analysis

NASA Astrophysics Data System (ADS)

Tang, DanLing

2016-07-01

Algal bloom is defined as a rapid increase or accumulation in biomass in an aquatic system. It not only can increase the primary production but also could result in negative ecological consequence, e.g.,Harmful Algal Blooms (HABs). According to the classic theory for the formation of algal blooms "critical depth" and "eutrophication", oligotrophic sea area is usually difficult to form a large area of algal blooms, and actuallythe traditional observation is only sporadic capture to the existence of algal blooms.Taking full advantage of multiple data of satellite remote sensing , this study introduces "Wind-driven algal blooms in open oceans: observation and mechanisms" It explained except classic coastal Ekman transport, the wind through a variety of mechanisms affecting the formation of algal blooms. Proposed a conceptual model of "Strong wind -upwelling-nutrient-phytoplankton blooms" in Western South China Sea (SCS) to assess role of wind-induced advection transport in phytoplankton bloom formation. It illustrates the nutrient resources that support long-term offshore phytoplankton blooms in the western SCS; (2)Proposal of the theory that "typhoons cause vertical mixing, induce phytoplankton blooms", and quantify their important contribution to marine primary production; Proposal a new ecological index for typhoon. Proposed remote sensing inversion models. (3)Finding of the spatial and temporaldistributions pattern of harmful algal bloom (HAB)and species variations of HAB in the South Yellow Sea and East China Sea, and in the Pearl River estuary, and their oceanic dynamic mechanisms related with monsoon; The project developed new techniques and generated new knowledge, which significantly improved understanding of the formation mechanisms of algal blooms. The proposed "wind-pump" mechanism integrates theoretical system combined "ocean dynamics, development of algal blooms, and impact on primary production", which will benefit fisheries management. These achievements led to the development of a new interdisciplinary subject "Remote Sensing Marine Ecology"(RSME).

[Effects of outbreak and extinction of algal blooms on the microbial community structure in sediments of Chaohu Lake].

PubMed

Diao, Xiao-jun; Li, Yi-wei; Wang, Shu-guang

2015-01-01

Although impacts of algal bloom on the physicochemical and biological properties of water and sediment in many lakes have been largely studied, less attention is paid to the impact of outbreak and extinction of algal blooms on the microbial community structure in sediment. In this study, outbreak and extinction of algal blooms and their effects on the microbial community structure in sediment of Chaohu Lake were studied by PCR-DGGE method. The results showed that algal blooms formed between May 15 and June 20, sustained from June 20 to September 5, and then went into extinction. In the region without algal blooms, PCR-DGGE analysis showed that microbial species, Shannon-Wiener diversity index and Simpson dominance index changed slightly over time; moreover, the microbial community structure had high similarity during the whole study. Temperature may be the main factor affecting the fluctuation of the microbial community structure in this region. In the region with algal blooms, however, microbial species and Shannon-Wiener diversity index were higher during the formation and extinction of algal blooms and lower in the sustaining blooms stage than those in the region without algal blooms. But the Simpson dominance index showed the opposite trend over time. In addition, the microbial community structure had low similarity during the whole study. The results suggested that outbreak and extinction of algal blooms produced different effects on the microbial community structure and the dominant microbial species, which may be related to the variation of water properties caused by temperature and algal blooms. This study showed that outbreak and extinction of algal blooms caused different effects on microbes in lake sediment, and this is significantly important to deeply evaluate the effects of algal bloom on the aquatic ecosystem of the lake and effectively control algal blooms using sediment microbes.

A multiomics approach to study the microbiome response to phytoplankton blooms.

PubMed

Song, Liyan

2017-06-01

Phytoplankton blooms are predictable features of marine and freshwater habitats. Despite a good knowledge base of the environmental factors controlling blooms, complex interactions between the bacterial and archaeal communities and phytoplankton bloom taxa are only now emerging. Here, the current research on bacterial community's structural and functional response to phytoplankton blooms is reviewed and discussed and further research is proposed. More attention should be paid on structure and function of autotrophic bacteria and archaea during phytoplankton blooms. A multiomics integration approach is needed to investigate bacterial and archaeal communities' diversity, metabolic diversity, and biogeochemical functions of microbial interactions during phytoplankton blooms.

Characterization of Karenia brevis blooms on the West Florida Shelf using ocean color satellite imagery: implications for bloom maintenance and evolution

NASA Astrophysics Data System (ADS)

Soto, Inia M.; Muller-Karger, Frank E.; Hu, Chuanmin; Wolny, Jennifer

2017-01-01

Satellite ocean color remote sensing techniques, coupled with in situ data, were used to examine the spatial extent and evolution of four Karenia brevis blooms on the West Florida Shelf (WFS) in 2004, 2005, 2006, and 2011. Observations were obtained with the moderate resolution imaging spectroradiometer (MODIS-Aqua). These four blooms were delineated by combining remote-sensing reflectance at 555 nm and normalized fluorescence line height. In 2004 and 2005, the WFS was affected by several hurricanes, including the category 5 storm Hurricane Katrina. These hurricanes led to increased river discharge and vertical mixing which favored bloom intensification and dispersion. No hurricanes passed over the WSF in 2006; however, storms in south Florida may have aided bloom intensification via increased river discharge. In 2011, a bloom appeared off Venice, Florida, where several small creeks discharge. The bloom moved south toward Charlotte Harbor where it intensified and lingered for several months as it received nutrients from riverine discharge and upwelling events. While it is difficult to identify initiation stages of a K. brevis bloom (<˜50,000 cells L-1) using satellite imagery, the techniques used here provide information about bloom evolution (size, duration, and advection) and insight into factors affecting bloom dynamics.

Monitoring for Harmful Algal Blooms in Influent Waters and Through Treatment on Lake Erie in the 2013 and 2014 Bloom Seasons 

EPA Science Inventory

Monitoring of Harmful Algal Blooms in Influent and Through Drinking Water Treatment Facilities Located on Lake Erie in the 2013 and 2014 Bloom SeasonsToby Sanan, Nicholas Dugan, Darren Lytle, Heath MashHarmful algal blooms (HABs) and their associated toxins are emerging as signif...

Field and laboratory guide to freshwater cyanobacteria harmful algal blooms for Native American and Alaska Native communities

USGS Publications Warehouse

Rosen, Barry H.; St. Amand, Ann

2015-09-14

Cyanobacteria can produce toxins and form harmful algal blooms. The Native American and Alaska Native communities that are dependent on subsistence fishing have an increased risk of exposure to these cyanotoxins. It is important to recognize the presence of an algal bloom in a waterbody and to distinguish a potentially toxic harmful algal bloom from a non-toxic bloom. This guide provides field images that show cyanobacteria blooms, some of which can be toxin producers, as well as other non-toxic algae blooms and floating plants that might be confused with algae. After recognition of a potential toxin-producing cyanobacterial bloom in the field, the type(s) of cyanobacteria present needs to be identified. Species identification, which requires microscopic examination, may help distinguish a toxin-producer from a non-toxin producer. This guide also provides microscopic images of the common cyanobacteria that are known to produce toxins, as well as images of algae that form blooms but do not produce toxins.

Introducing Risk Management Techniques Within Project Based Software Engineering Courses

NASA Astrophysics Data System (ADS)

Port, Daniel; Boehm, Barry

2002-03-01

In 1996, USC switched its core two-semester software engineering course from a hypothetical-project, homework-and-exam course based on the Bloom taxonomy of educational objectives (knowledge, comprehension, application, analysis, synthesis, and evaluation). The revised course is a real-client team-project course based on the CRESST model of learning objectives (content understanding, problem solving, collaboration, communication, and self-regulation). We used the CRESST cognitive demands analysis to determine the necessary student skills required for software risk management and the other major project activities, and have been refining the approach over the last 5 years of experience, including revised versions for one-semester undergraduate and graduate project course at Columbia. This paper summarizes our experiences in evolving the risk management aspects of the project course. These have helped us mature more general techniques such as risk-driven specifications, domain-specific simplifier and complicator lists, and the schedule as an independent variable (SAIV) process model. The largely positive results in terms of review of pass / fail rates, client evaluations, product adoption rates, and hiring manager feedback are summarized as well.

Spatial and temporal patterns in the seasonal distribution of toxic cyanobacteria in Western Lake Erie from 2002-2014.

PubMed

Wynne, Timothy T; Stumpf, Richard P

2015-05-12

Lake Erie, the world's tenth largest freshwater lake by area, has had recurring blooms of toxic cyanobacteria for the past two decades. These blooms pose potential health risks for recreation, and impact the treatment of drinking water. Understanding the timing and distribution of the blooms may aid in planning by local communities and resources managers. Satellite data provides a means of examining spatial patterns of the blooms. Data sets from MERIS (2002-2012) and MODIS (2012-2014) were analyzed to evaluate bloom patterns and frequencies. The blooms were identified using previously published algorithms to detect cyanobacteria (~25,000 cells mL-1), as well as a variation of these algorithms to account for the saturation of the MODIS ocean color bands. Images were binned into 10-day composites to reduce cloud and mixing artifacts. The 13 years of composites were used to determine frequency of presence of both detectable cyanobacteria and high risk (>100,000 cells mL-1) blooms. The bloom season according to the satellite observations falls within June 1 and October 31. Maps show the pattern of development and areas most commonly impacted during all years (with minor and severe blooms). Frequencies during years with just severe blooms (minor bloom years were not included in the analysis) were examined in the same fashion. With the annual forecasts of bloom severity, these frequency maps can provide public water suppliers and health departments with guidance on the timing of potential risk.

Using Firefly Tools to Enhance Archive Web Pages

NASA Astrophysics Data System (ADS)

Roby, W.; Wu, X.; Ly, L.; Goldina, T.

2013-10-01

Astronomy web developers are looking for fast and powerful HTML 5/AJAX tools to enhance their web archives. We are exploring ways to make this easier for the developer. How could you have a full FITS visualizer or a Web 2.0 table that supports paging, sorting, and filtering in your web page in 10 minutes? Can it be done without even installing any software or maintaining a server? Firefly is a powerful, configurable system for building web-based user interfaces to access astronomy science archives. It has been in production for the past three years. Recently, we have made some of the advanced components available through very simple JavaScript calls. This allows a web developer, without any significant knowledge of Firefly, to have FITS visualizers, advanced table display, and spectrum plots on their web pages with minimal learning curve. Because we use cross-site JSONP, installing a server is not necessary. Web sites that use these tools can be created in minutes. Firefly was created in IRSA, the NASA/IPAC Infrared Science Archive (http://irsa.ipac.caltech.edu). We are using Firefly to serve many projects including Spitzer, Planck, WISE, PTF, LSST and others.

Analysis of algal bloom risk with uncertainties in lakes by integrating self-organizing map and fuzzy information theory.

PubMed

Chen, Qiuwen; Rui, Han; Li, Weifeng; Zhang, Yanhui

2014-06-01

Algal blooms are a serious problem in waters, which damage aquatic ecosystems and threaten drinking water safety. However, the outbreak mechanism of algal blooms is very complex with great uncertainty, especially for large water bodies where environmental conditions have obvious variation in both space and time. This study developed an innovative method which integrated a self-organizing map (SOM) and fuzzy information diffusion theory to comprehensively analyze algal bloom risks with uncertainties. The Lake Taihu was taken as study case and the long-term (2004-2010) on-site monitoring data were used. The results showed that algal blooms in Taihu Lake were classified into four categories and exhibited obvious spatial-temporal patterns. The lake was mainly characterized by moderate bloom but had high uncertainty, whereas severe blooms with low uncertainty were observed in the northwest part of the lake. The study gives insight on the spatial-temporal dynamics of algal blooms, and should help government and decision-makers outline policies and practices on bloom monitoring and prevention. The developed method provides a promising approach to estimate algal bloom risks under uncertainties. Copyright © 2014 Elsevier B.V. All rights reserved.

Coccolithophorid blooms in the global ocean

NASA Technical Reports Server (NTRS)

Brown, Christopher W.; Yoder, James A.

1994-01-01

The global distribution pattern of coccolithophrid blooms was mapped in order to ascertain the prevalence of these blooms in the world's oceans and to estimate their worldwide production of CaCO3 and dimethyl sulfide (DMS). Mapping was accomplished by classifying pixels of 5-day global composites of coastal zone color scanner imagery into bloom and nonbloom classes using a supervised, multispectral classification scheme. Surface waters with the spectral signature of coccolithophorid blooms annually covered an average of 1.4 x 10(exp 6) sq km in the world oceans from 1979 to 1985, with the subpolar latitudes accounting for 71% of this surface area. Classified blooms were most extensive in the Subartic North Atlantic. Large expanses of the bloom signal were also detected in the North Pacific, on the Argentine shelf and slope, and in numerous lower latitude marginal seas and shelf regions. The greatest spatial extent of classified blooms in subpolar oceanic regions occurred in the months from summer to early autumn, while those in lower latitude marginal seas occurred in midwinter to early spring. Though the classification scheme was effcient in separating bloom and nonbloom classes during test simulations, and biogeographical literature generally confirms the resulting distribution pattern of blooms in the subpolar regions, the cause of the bloom signal is equivocal in some geographic areas, particularly on shelf regions at lower latitudes. Standing stock estimates suggest that the presumed Emiliania huxleyi blooms act as a significant source of calcite carbon and DMS sulfur on a regional scale. On a global scale, however, the satellite-detected coccolithophorid blooms are estimated to play only a minor role in the annual production of these two compounds and their flux from the surface mixed layer.

Isolation by Time During an Arctic Phytoplankton Spring Bloom.

PubMed

Tammilehto, Anna; Watts, Phillip C; Lundholm, Nina

2017-03-01

The arctic phytoplankton spring bloom, which is often diatom-dominated, is a key event that provides the high latitude communities with a fundamental flux of organic carbon. During a bloom, phytoplankton may increase its biomass by orders of magnitude within days. Yet, very little is known about phytoplankton bloom dynamics, including for example how blooming affects genetic composition and diversity of a population. Here, we quantified the genetic composition and temporal changes of the diatom Fragilariopsis cylindrus, which is one of the most important primary producers in the Arctic, during the spring bloom in western Greenland, using 13 novel microsatellite markers developed for this study. We found that genetic differentiation (quantified using sample-specific F ST ) decreased between time points as the bloom progressed, with the most drastic changes in F ST occurring at the start of the bloom; thus the genetic structure of the bloom is characterized by isolation by time. There was little temporal variation in genetic diversity throughout the bloom (mean H E  = 0.57), despite marked fluctuations in F. cylindrus cell concentrations and the temporal change in sample-specific F ST . On the basis of this novel pattern of genetic differentiation, we suggest that blooming behavior may promote genetic diversity of a phytoplankton population. © 2016 The Author(s) Journal of Eukaryotic Microbiology © 2016 International Society of Protistologists.

A model of phytoplankton blooms.

PubMed

Huppert, Amit; Blasius, Bernd; Stone, Lewi

2002-02-01

A simple model that describes the dynamics of nutrient-driven phytoplankton blooms is presented. Apart from complicated simulation studies, very few models reported in the literature have taken this "bottom-up" approach. Yet, as discussed and justified from a theoretical standpoint, many blooms are strongly controlled by nutrients rather than by higher trophic levels. The analysis identifies an important threshold effect: a bloom will only be triggered when nutrients exceed a certain defined level. This threshold effect should be generic to both natural blooms and most simulation models. Furthermore, predictions are given as to how the peak of the bloom Pmax is determined by initial conditions. A number of counterintuitive results are found. In particular, it is shown that increasing initial nutrient or phytoplankton levels can act to decrease Pmax. Correct predictions require an understanding of such factors as the timing of the bloom and the period of nutrient buildup before the bloom.

The Blooming Anatomy Tool (BAT): A Discipline-Specific Rubric for Utilizing Bloom's Taxonomy in the Design and Evaluation of Assessments in the Anatomical Sciences

ERIC Educational Resources Information Center

Thompson, Andrew R.; O'Loughlin, Valerie D.

2015-01-01

Bloom's taxonomy is a resource commonly used to assess the cognitive level associated with course assignments and examination questions. Although widely utilized in educational research, Bloom's taxonomy has received limited attention as an analytical tool in the anatomical sciences. Building on previous research, the Blooming Anatomy Tool (BAT)…

The Blooming Anatomy Tool (BAT): A discipline-specific rubric for utilizing Bloom's taxonomy in the design and evaluation of assessments in the anatomical sciences.

PubMed

Thompson, Andrew R; O'Loughlin, Valerie D

2015-01-01

Bloom's taxonomy is a resource commonly used to assess the cognitive level associated with course assignments and examination questions. Although widely utilized in educational research, Bloom's taxonomy has received limited attention as an analytical tool in the anatomical sciences. Building on previous research, the Blooming Anatomy Tool (BAT) was developed. This rubric provides discipline-specific guidelines to Blooming anatomy multiple-choice questions (MCQs). To test the efficacy of the BAT, a group of volunteers were randomly split up and asked to Bloom a series of anatomy MCQs using either the BAT or a traditional Bloom's reference called Bloom's Learning Objectives (BLO). Both groups utilized each rubric for a different series of MCQs. Examination question categorizations made using each rubric were tested for accuracy and interrater reliability. In addition, previous experience in anatomy and Bloom's taxonomy were considered. Results demonstrated that volunteers using the BAT had consistently higher levels of interrater reliability, but accuracy varied and was similar between rubrics. Neither measure was substantially impacted by experience in Bloom's taxonomy or anatomy. A poststudy survey indicated that volunteers strongly preferred the BAT and felt it was more helpful in categorizing anatomy MCQs than the BLO. These results suggest that the BAT can be useful in educational research in the anatomical sciences to aid in aligning observer judgment on Bloom taxonomic levels and improve consistency, especially when used in conjunction with a norming session prior to data collection. © 2014 American Association of Anatomists.

A comprehensive overview of the spatial and temporal variability of apple bud dormancy release and blooming phenology in Western Europe

NASA Astrophysics Data System (ADS)

Legave, Jean Michel; Blanke, Michael; Christen, Danilo; Giovannini, Daniela; Mathieu, Vincent; Oger, Robert

2013-03-01

In the current context of global warming, an analysis is required of spatially-extensive and long-term blooming data in fruit trees to make up for insufficient information on regional-scale blooming changes and determinisms that are key to the phenological adaptation of these species. We therefore analysed blooming dates over long periods at climate-contrasted sites in Western Europe, focusing mainly on the Golden Delicious apple that is grown worldwide. On average, blooming advances were more pronounced in northern continental (10 days) than in western oceanic (6-7 days) regions, while the shortest advance was found on the Mediterranean coastline. Temporal trends toward blooming phase shortenings were also observed in continental regions. These regional differences in temporal variability across Western Europe resulted in a decrease in spatial variability, i.e. shorter time intervals between blooming dates in contrasted regions (8-10-day decrease for full bloom between Mediterranean and continental regions). Fitted sequential models were used to reproduce phenological changes. Marked trends toward shorter simulated durations of forcing period (bud growth from dormancy release to blooming) and high positive correlations between these durations and observed blooming dates support the notion that blooming advances and shortenings are mainly due to faster satisfaction of the heating requirement. However, trends toward later dormancy releases were also noted in oceanic and Mediterranean regions. This could tend toward blooming delays and explain the shorter advances in these regions despite similar or greater warming. The regional differences in simulated chilling and forcing periods were consistent with the regional differences in temperature increases.

Collective Trust: A Social Indicator of Instructional Capacity

ERIC Educational Resources Information Center

Adams, Curt M.

2013-01-01

Purpose: The purpose of this study is to test the validity of using collective trust as a social indicator of instructional capacity. Design/methodology/approach: A hypothesized model was advanced for the empirical investigation. Collective trust was specified as a latent construct with observable indicators being principal trust in faculty (PTF),…

Machine-learning-based real-bogus system for the HSC-SSP moving object detection pipeline

NASA Astrophysics Data System (ADS)

Lin, Hsing-Wen; Chen, Ying-Tung; Wang, Jen-Hung; Wang, Shiang-Yu; Yoshida, Fumi; Ip, Wing-Huen; Miyazaki, Satoshi; Terai, Tsuyoshi

2018-01-01

Machine-learning techniques are widely applied in many modern optical sky surveys, e.g., Pan-STARRS1, PTF/iPTF, and the Subaru/Hyper Suprime-Cam survey, to reduce human intervention in data verification. In this study, we have established a machine-learning-based real-bogus system to reject false detections in the Subaru/Hyper-Suprime-Cam Strategic Survey Program (HSC-SSP) source catalog. Therefore, the HSC-SSP moving object detection pipeline can operate more effectively due to the reduction of false positives. To train the real-bogus system, we use stationary sources as the real training set and "flagged" data as the bogus set. The training set contains 47 features, most of which are photometric measurements and shape moments generated from the HSC image reduction pipeline (hscPipe). Our system can reach a true positive rate (tpr) ˜96% with a false positive rate (fpr) ˜1% or tpr ˜99% at fpr ˜5%. Therefore, we conclude that stationary sources are decent real training samples, and using photometry measurements and shape moments can reject false positives effectively.

Cerebellar Development and Disease

PubMed Central

Gleeson, Joseph G.

2008-01-01

Recent Advances The molecular control of cell type specification within the developing cerebellum as well as the genetic causes of the most common human developmental cerebellar disorders have long remained mysterious. Recent genetic lineage and loss-of-function data from mice have revealed unique and non-overlapping anatomical origins for GABAergic neurons from ventricular zone precursors and glutamatergic cell from rhombic lip precursors, mirroring distinct origins for these neurotransmitter-specific cell types in the cerebral cortex. Mouse studies elucidating the role of Ptf1a as a cerebellar ventricular zone GABerigic fate switch were actually preceded by the recognition that PTF1A mutations in humans cause cerebellar agenesis, a birth defect of the human cerebellum. Indeed, several genes for congenital human cerebellar malformations have recently been identified, including genes causing Joubert syndrome, Dandy-Walker malformation and Ponto-cerebellar hypoplasia. These studies have pointed to surprisingly complex roles for transcriptional regulation, mitochondrial function and neuronal cilia in patterning, homeostasis and cell proliferation during cerebellar development. Together mouse and human studies are synergistically advancing our understanding of the developmental mechanisms that generate the uniquely complex mature cerebellum. PMID:18513948

VizieR Online Data Catalog: R-band light curves of type II supernovae (Rubin+, 2016)

NASA Astrophysics Data System (ADS)

Rubin, A.; Gal-Yam, A.; De Cia, A.; Horesh, A.; Khazov, D.; Ofek, E. O.; Kulkarni, S. R.; Arcavi, I.; Manulis, I.; Yaron, O.; Vreeswijk, P.; Kasliwal, M. M.; Ben-Ami, S.; Perley, D. A.; Cao, Y.; Cenko, S. B.; Rebbapragada, U. D.; Wozniak, P. R.; Filippenko, A. V.; Clubb, K. I.; Nugent, P. E.; Pan, Y.-C.; Badenes, C.; Howell, D. A.; Valenti, S.; Sand, D.; Sollerman, J.; Johansson, J.; Leonard, D. C.; Horst, J. C.; Armen, S. F.; Fedrow, J. M.; Quimby, R. M.; Mazzali, P.; Pian, E.; Sternberg, A.; Matheson, T.; Sullivan, M.; Maguire, K.; Lazarevic, S.

2016-05-01

Our sample consists of 57 SNe from the PTF (Law et al. 2009PASP..121.1395L; Rau et al. 2009PASP..121.1334R) and the intermediate Palomar Transient Factory (iPTF; Kulkarni 2013ATel.4807....1K) surveys. Data were routinely collected by the Palomar 48-inch survey telescope in the Mould R-band. Follow-up observations were conducted mainly with the robotic 60-inch telescope using an SDSS r-band filter, with additional telescopes providing supplementary photometry and spectroscopy (see Gal-Yam et al. 2011, J/ApJ/736/159). The full list of SNe, their coordinates, and classification spectra are presented in Table 1. Most of the spectra were obtained with the Double Spectrograph on the 5m Hale telescope at Palomar Observatory, the Kast spectrograph on the Shane 3m telescope at Lick Observatory, the Low Resolution Imaging Spectrometer (LRIS) on the Keck I 10m telescope, and the DEep Imaging Multi-Object Spectrograph (DEIMOS) on the Keck II 10m telescope. (2 data files).

Incidence rates, correlates, and prognosis of electrocardiographic P-wave abnormalities - a nationwide population-based study.

PubMed

Lehtonen, Arttu O; Langén, Ville L; Puukka, Pauli J; Kähönen, Mika; Nieminen, Markku S; Jula, Antti M; Niiranen, Teemu J

Scant data exist on incidence rates, correlates, and prognosis of electrocardiographic P-wave abnormalities in the general population. We recorded ECG and measured conventional cardiovascular risk factors in 5667 Finns who were followed up for incident atrial fibrillation (AF). We obtained repeat ECGs from 3089 individuals 11years later. The incidence rates of prolonged P-wave duration, abnormal P terminal force (PTF), left P-wave axis deviation, and right P-wave axis deviation were 16.0%, 7.4%, 3.4%, and 2.2%, respectively. Older age and higher BMI were associated with incident prolonged P-wave duration and abnormal PTF (P≤0.01). Higher blood pressure was associated with incident prolonged P-wave duration and right P-wave axis deviation (P≤0.01). During follow-up, only prolonged P-wave duration predicted AF (multivariable-adjusted hazard ratio, 1.38; P=0.001). Modifiable risk factors associate with P-wave abnormalities that are common and may represent intermediate steps of atrial cardiomyopathy on a pathway leading to AF. Copyright © 2017 Elsevier Inc. All rights reserved.

Controls of primary production in two phytoplankton blooms in the Antarctic Circumpolar Current

NASA Astrophysics Data System (ADS)

Hoppe, C. J. M.; Klaas, C.; Ossebaar, S.; Soppa, M. A.; Cheah, W.; Laglera, L. M.; Santos-Echeandia, J.; Rost, B.; Wolf-Gladrow, D. A.; Bracher, A.; Hoppema, M.; Strass, V.; Trimborn, S.

2017-04-01

The Antarctic Circumpolar Current has a high potential for primary production and carbon sequestration through the biological pump. In the current study, two large-scale blooms observed in 2012 during a cruise with R.V. Polarstern were investigated with respect to phytoplankton standing stocks, primary productivity and nutrient budgets. While net primary productivity was similar in both blooms, chlorophyll a -specific photosynthesis was more efficient in the bloom closer to the island of South Georgia (39 °W, 50 °S) compared to the open ocean bloom further east (12 °W, 51 °S). We did not find evidence for light being the driver of bloom dynamics as chlorophyll standing stocks up to 165 mg m-2 developed despite mixed layers as deep as 90 m. Since the two bloom regions differ in their distance to shelf areas, potential sources of iron vary. Nutrient (nitrate, phosphate, silicate) deficits were similar in both areas despite different bloom ages, but their ratios indicated more pronounced iron limitation at 12 °W compared to 39 °W. While primarily the supply of iron and not the availability of light seemed to control onset and duration of the blooms, higher grazing pressure could have exerted a stronger control toward the declining phase of the blooms.

Phytoplankton bloom dynamics in temperate, turbid, stressed estuaries: a model study

NASA Astrophysics Data System (ADS)

de Swart, Huib E.; Liu, Bo; de Jonge, Victor

2017-04-01

To gain insight into mechanisms underlying phytoplankton bloom dynamics in temperature, turbid estuaries, experiments were conducted with an idealised model that couples physical and biological processes. Results show that the model is capable of producing the main features of the observed blooms in the Ems estuary (Northwest Germany), viz. in the lower reach a spring bloom occur, which is followed by a secondary bloom in autumn. The along-estuary distribution of suspended sediment concentration (SSC) and the along-estuary distance between the nutrient source and the seaward bound of the turbidity zone control both the along-estuary locations and intensities of the blooms. Results of further sensitivity studies reveal that in a shallow, well-mixed estuary, under temporally-constant suspended sediment conditions, the seasonally-varying water temperature has larger impact on the timing of spring blooms than the seasonally-varying incident light intensity. The occurrence of the secondary bloom is caused by the fact that the growth rate of phytoplankton attains a maximum at an optimum water temperature. Bloom intensities are also modulated by the advective processes related to subtidal current because the latter regulates the seaward transport of nutrient from riverine source. Large-scale deepening of navigation channels leads to later spring blooms due to increased mixing depth. Finally, phytoplankton blooms are unlikely to occur in the upper reach due to the elevated SSC and the landward expansion of turbidity zone related to large-scale deepening.

The green impact: bacterioplankton response toward a phytoplankton spring bloom in the southern North Sea assessed by comparative metagenomic and metatranscriptomic approaches

PubMed Central

Wemheuer, Bernd; Wemheuer, Franziska; Hollensteiner, Jacqueline; Meyer, Frauke-Dorothee; Voget, Sonja; Daniel, Rolf

2015-01-01

Phytoplankton blooms exhibit a severe impact on bacterioplankton communities as they change nutrient availabilities and other environmental factors. In the current study, the response of a bacterioplankton community to a Phaeocystis globosa spring bloom was investigated in the southern North Sea. For this purpose, water samples were taken inside and reference samples outside of an algal spring bloom. Structural changes of the bacterioplankton community were assessed by amplicon-based analysis of 16S rRNA genes and transcripts generated from environmental DNA and RNA, respectively. Several marine groups responded to bloom presence. The abundance of the Roseobacter RCA cluster and the SAR92 clade significantly increased in bloom presence in the total and active fraction of the bacterial community. Functional changes were investigated by direct sequencing of environmental DNA and mRNA. The corresponding datasets comprised more than 500 million sequences across all samples. Metatranscriptomic data sets were mapped on representative genomes of abundant marine groups present in the samples and on assembled metagenomic and metatranscriptomic datasets. Differences in gene expression profiles between non-bloom and bloom samples were recorded. The genome-wide gene expression level of Planktomarina temperata, an abundant member of the Roseobacter RCA cluster, was higher inside the bloom. Genes that were differently expressed included transposases, which showed increased expression levels inside the bloom. This might contribute to the adaptation of this organism toward environmental stresses through genome reorganization. In addition, several genes affiliated to the SAR92 clade were significantly upregulated inside the bloom including genes encoding for proteins involved in isoleucine and leucine incorporation. Obtained results provide novel insights into compositional and functional variations of marine bacterioplankton communities as response to a phytoplankton bloom. PMID:26322028

Macroalgal blooms alter community structure and primary productivity in marine ecosystems.

PubMed

Lyons, Devin A; Arvanitidis, Christos; Blight, Andrew J; Chatzinikolaou, Eva; Guy-Haim, Tamar; Kotta, Jonne; Orav-Kotta, Helen; Queirós, Ana M; Rilov, Gil; Somerfield, Paul J; Crowe, Tasman P

2014-09-01

Eutrophication, coupled with loss of herbivory due to habitat degradation and overharvesting, has increased the frequency and severity of macroalgal blooms worldwide. Macroalgal blooms interfere with human activities in coastal areas, and sometimes necessitate costly algal removal programmes. They also have many detrimental effects on marine and estuarine ecosystems, including induction of hypoxia, release of toxic hydrogen sulphide into the sediments and atmosphere, and the loss of ecologically and economically important species. However, macroalgal blooms can also increase habitat complexity, provide organisms with food and shelter, and reduce other problems associated with eutrophication. These contrasting effects make their overall ecological impacts unclear. We conducted a systematic review and meta-analysis to estimate the overall effects of macroalgal blooms on several key measures of ecosystem structure and functioning in marine ecosystems. We also evaluated some of the ecological and methodological factors that might explain the highly variable effects observed in different studies. Averaged across all studies, macroalgal blooms had negative effects on the abundance and species richness of marine organisms, but blooms by different algal taxa had different consequences, ranging from strong negative to strong positive effects. Blooms' effects on species richness also depended on the habitat where they occurred, with the strongest negative effects seen in sandy or muddy subtidal habitats and in the rocky intertidal. Invertebrate communities also appeared to be particularly sensitive to blooms, suffering reductions in their abundance, species richness, and diversity. The total net primary productivity, gross primary productivity, and respiration of benthic ecosystems were higher during macroalgal blooms, but blooms had negative effects on the productivity and respiration of other organisms. These results suggest that, in addition to their direct social and economic costs, macroalgal blooms have ecological effects that may alter their capacity to deliver important ecosystem services. © 2014 John Wiley & Sons Ltd.

Blooms of cyanobacteria on the potomac river.

PubMed

Krogmann, D W; Butalla, R; Sprinkle, J

1986-03-01

Blooms of cyanobacteria have appeared on the Potomac River near Washington, DC in years of drought and low river volume. The location of the bloom may be related to tidal activity. In 1983, the bloom of Microcystis aeruginosa used ammonia as its nitrogen source and contained low levels of toxic peptides. Cells collected from this bloom proved to be homogeneous and were an excellent source material for the isolation of proteins involved in photosynthesis.

Cosmic Explosions (Optical)

NASA Astrophysics Data System (ADS)

Kulkarni, S. R.

2012-04-01

One of the principal motivations of wide-field and synoptic surveys is the search for, and study of, transients. By transients I mean those sources that arise from the background, are detectable for some time, and then fade away to oblivion. Transients in distant galaxies need to be sufficiently bright as to be detectable, and in almost all cases those transients are catastrophic events, marking the deaths of stars. Exemplars include supernovæ and gamma-ray bursts. In our own Galaxy, the transients are strongly variable stars, and in almost all cases are at best cataclysmic rather than catastrophic. Exemplars include flares from M dwarfs, novæ of all sorts (dwarf novæ, recurrent novæ, classical novæ, X-ray novæ) and instabilities in the surface layers of stars such as S Dor or η Carina. In the nearby Universe (say out to the Virgo cluster) we have sufficient sensitivity to see novæ. In 1 I review the history of transients (which is intimately related to the advent of wide-field telescopic imaging). In 2 I summarize wide-field imaging projects, and I then review the motivations that led to the design of the Palomar Transient Factory (PTF). Next comes a summary of the astronomical returns from PTF (3), and that is followed by lessons that I have learnt from PTF (4). I conclude that, during this decade, the study of optical transients will continue to flourish (and may even accelerate as surveys at other wavelengths-notably radio, UV and X-ray-come on-line). Furthermore, it is highly likely that there will be a proliferation of highly-specialized searches for transients. Those searches may well remain active even in the era of LSST (5). I end the article by discussing the importance of follow-up telescopes for transient object studies-a topical issue, given the Portfolio Review that is being undertaken in the US.

Cross-Matching Source Observations from the Palomar Transient Factory (PTF)

NASA Astrophysics Data System (ADS)

Laher, Russ; Grillmair, C.; Surace, J.; Monkewitz, S.; Jackson, E.

2009-01-01

Over the four-year lifetime of the PTF project, approximately 40 billion instances of astronomical-source observations will be extracted from the image data. The instances will correspond to the same astronomical objects being observed at roughly 25-50 different times, and so a very large catalog containing important object-variability information will be the chief PTF product. Organizing astronomical-source catalogs is conventionally done by dividing the catalog into declination zones and sorting by right ascension within each zone (e.g., the USNOA star catalog), in order to facilitate catalog searches. This method was reincarnated as the "zones" algorithm in a SQL-Server database implementation (Szalay et al., MSR-TR-2004-32), with corrections given by Gray et al. (MSR-TR-2006-52). The primary advantage of this implementation is that all of the work is done entirely on the database server and client/server communication is eliminated. We implemented the methods outlined in Gray et al. for a PostgreSQL database. We programmed the methods as database functions in PL/pgSQL procedural language. The cross-matching is currently based on source positions, but we intend to extend it to use both positions and positional uncertainties to form a chi-square statistic for optimal thresholding. The database design includes three main tables, plus a handful of internal tables. The Sources table stores the SExtractor source extractions taken at various times; the MergedSources table stores statistics about the astronomical objects, which are the result of cross-matching records in the Sources table; and the Merges table, which associates cross-matched primary keys in the Sources table with primary keys in the MergedSoures table. Besides judicious database indexing, we have also internally partitioned the Sources table by declination zone, in order to speed up the population of Sources records and make the database more manageable. The catalog will be accessible to the public after the proprietary period through IRSA (irsa.ipac.caltech.edu).

Small Near-Earth Asteroids in the Palomar Transient Factory Survey: A Real-Time Streak-detection System

NASA Astrophysics Data System (ADS)

Waszczak, Adam; Prince, Thomas A.; Laher, Russ; Masci, Frank; Bue, Brian; Rebbapragada, Umaa; Barlow, Tom; Surace, Jason; Helou, George; Kulkarni, Shrinivas

2017-03-01

Near-Earth asteroids (NEAs) in the 1-100 meter size range are estimated to be ˜1,000 times more numerous than the ˜15,000 currently cataloged NEAs, most of which are in the 0.5-10 kilometer size range. Impacts from 10-100 meter size NEAs are not statistically life-threatening, but may cause significant regional damage, while 1-10 meter size NEAs with low velocities relative to Earth are compelling targets for space missions. We describe the implementation and initial results of a real-time NEA-discovery system specialized for the detection of small, high angular rate (visually streaked) NEAs in Palomar Transient Factory (PTF) images. PTF is a 1.2-m aperture, 7.3 deg2 field of view (FOV) optical survey designed primarily for the discovery of extragalactic transients (e.g., supernovae) in 60-second exposures reaching ˜20.5 visual magnitude. Our real-time NEA discovery pipeline uses a machine-learned classifier to filter a large number of false-positive streak detections, permitting a human scanner to efficiently and remotely identify real asteroid streaks during the night. Upon recognition of a streaked NEA detection (typically within an hour of the discovery exposure), the scanner triggers follow-up with the same telescope and posts the observations to the Minor Planet Center for worldwide confirmation. We describe our 11 initial confirmed discoveries, all small NEAs that passed 0.3-15 lunar distances from Earth. Lastly, we derive useful scaling laws for comparing streaked-NEA-detection capabilities of different surveys as a function of their hardware and survey-pattern characteristics. This work most directly informs estimates of the streak-detection capabilities of the Zwicky Transient Facility (ZTF, planned to succeed PTF in 2017), which will apply PTF’s current resolution and sensitivity over a 47-deg2 FOV.

Metallicity from Type II supernovae from the (i)PTF

DOE PAGES

Taddia, F.; Moquist, P.; Sollerman, J.; ...

2016-03-01

Type IIP supernovae (SNe IIP) have recently been proposed as metallicity (Z) probes. The spectral models of Dessart et al. (2014, MNRAS, 440, 1856) showed that the pseudo-equivalent width of Fe ii λ5018 (pEW 5018) during the plateau phase depends on the primordial Z, but there was a paucity of SNe IIP exhibiting pEW 5018 that were compatible with Z < 0.4 Z ⊙. This lack might be due to some physical property of the SN II population or to the fact that those SNe have been discovered in luminous, metal-rich targeted galaxies. In this paper, we use SN IImore » observations from the untargeted (intermediate) Palomar Transient Factory [(i)PTF] survey, aiming to investigate the pEW 5018 distribution of this SN population and, in particular, to look for the presence of SNe II at lower Z. We perform pEW 5018 measurements on the spectra of a sample of 39 (i)PTF SNe II, selected to have well-constrained explosion epochs and light-curve properties. Based on the comparison with the pEW 5018 spectral models, we subgrouped our SNe into four Z bins from Z ≈ 0.1 Z ⊙ up to Z ≈ 2 Z ⊙. We also independently investigated the Z of the hosts by using their absolute magnitudes and colors and, in a few cases, using strong-line diagnostics from spectra. We searched for possible correlations between SN observables, such as their peak magnitudes and the Z inferred from pEW 5018. We found 11 events with pEW 5018 that were small enough to indicate Z ≈ 0.1 Z ⊙. The trend of pEW 5018 with Z matches the Z estimates obtained from the host-galaxy photometry, although the significance of the correlation is weak. Finally, we also found that SNe with brighter peak magnitudes have smaller pEW 5018 and occur at lower Z.« less

The nuclear hormone receptor family member NR5A2 controls aspects of multipotent progenitor cell formation and acinar differentiation during pancreatic organogenesis.

PubMed

Hale, Michael A; Swift, Galvin H; Hoang, Chinh Q; Deering, Tye G; Masui, Toshi; Lee, Youn-Kyoung; Xue, Jumin; MacDonald, Raymond J

2014-08-01

The orphan nuclear receptor NR5A2 is necessary for the stem-like properties of the epiblast of the pre-gastrulation embryo and for cellular and physiological homeostasis of endoderm-derived organs postnatally. Using conditional gene inactivation, we show that Nr5a2 also plays crucial regulatory roles during organogenesis. During the formation of the pancreas, Nr5a2 is necessary for the expansion of the nascent pancreatic epithelium, for the subsequent formation of the multipotent progenitor cell (MPC) population that gives rise to pre-acinar cells and bipotent cells with ductal and islet endocrine potential, and for the formation and differentiation of acinar cells. At birth, the NR5A2-deficient pancreas has defects in all three epithelial tissues: a partial loss of endocrine cells, a disrupted ductal tree and a >90% deficit of acini. The acinar defects are due to a combination of fewer MPCs, deficient allocation of those MPCs to pre-acinar fate, disruption of acinar morphogenesis and incomplete acinar cell differentiation. NR5A2 controls these developmental processes directly as well as through regulatory interactions with other pancreatic transcriptional regulators, including PTF1A, MYC, GATA4, FOXA2, RBPJL and MIST1 (BHLHA15). In particular, Nr5a2 and Ptf1a establish mutually reinforcing regulatory interactions and collaborate to control developmentally regulated pancreatic genes by binding to shared transcriptional regulatory regions. At the final stage of acinar cell development, the absence of NR5A2 affects the expression of Ptf1a and its acinar specific partner Rbpjl, so that the few acinar cells that form do not complete differentiation. Nr5a2 controls several temporally distinct stages of pancreatic development that involve regulatory mechanisms relevant to pancreatic oncogenesis and the maintenance of the exocrine phenotype. © 2014. Published by The Company of Biologists Ltd.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gauglitz, Phillip A.; Bontha, Jagannadha R.; Daniel, Richard C.

The Hanford Waste Treatment and Immobilization Plant (WTP) is currently being designed and constructed to pretreat and vitrify a large portion of the waste in the 177 underground waste storage tanks at the Hanford Site. A number of technical issues related to the design of the pretreatment facility (PTF) of the WTP have been identified. These issues must be resolved prior to the U.S. Department of Energy (DOE) Office of River Protection (ORP) reaching a decision to proceed with engineering, procurement, and construction activities for the PTF. One of the issues is Technical Issue T1 - Hydrogen Gas Release frommore » Vessels (hereafter referred to as T1). The focus of T1 is identifying controls for hydrogen release and completing any testing required to close the technical issue. In advance of selecting specific controls for hydrogen gas safety, a number of preliminary technical studies were initiated to support anticipated future testing and to improve the understanding of hydrogen gas generation, retention, and release within PTF vessels. These activities supported the development of a plan defining an overall strategy and approach for addressing T1 and achieving technical endpoints identified for T1. Preliminary studies also supported the development of a test plan for conducting testing and analysis to support closing T1. Both of these plans were developed in advance of selecting specific controls, and in the course of working on T1 it was decided that the testing and analysis identified in the test plan were not immediately needed. However, planning activities and preliminary studies led to significant technical progress in a number of areas. This report summarizes the progress to date from the preliminary technical studies. The technical results in this report should not be used for WTP design or safety and hazards analyses and technical results are marked with the following statement: “Preliminary Technical Results for Planning – Not to be used for WTP Design or Safety Analyses.”« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Russell, Renee L.; Rinehart, Donald E.; Peterson, Reid A.

Ion exchange using spherical resorcinol-formaldehyde (SRF) resin has been selected by the U.S. Department of Energy’s Office of River Protection (DOE-ORP) for use in the Pretreatment Facility (PTF) of the Hanford Tank Waste Treatment and Immobilization Plant (WTP) and for potential application in at-tank deployment. Numerous studies have shown SRF resin to be effective for removing 137Cs from a wide variety of actual and simulated tank waste supernatants (Adamson et al. 2006; Blanchard et al. 2008; Burgeson et al. 2004; Duignan and Nash 2009; Fiskum et al. 2006a; Fiskum et al. 2006b; Fiskum et al. 2006c; Fiskum et al. 2007;more » Hassan and Adu-Wusu 2003; King et al. 2004; Nash et al. 2006). Prior work at the Pacific Northwest National Laboratory (PNNL) has focused primarily on the loading behavior for 4 to 6 M Na solutions at 25 to 45°C. Recent proposed changes to the WTP ion exchange process baseline indicate that loading may include a broader range of sodium molarities (0.1 to 8 M) and higher temperatures (50°C) to alleviate post-filtration precipitation issues. This report discusses ion exchange loading kinetics testing activities performed in accordance with Test Plan TP-WTPSP-002, Rev. 3.0 , which was prepared and approved in response to the Test Specification 24590 PTF-TSP-RT-09-002, Rev. 0 (Lehrman 2010) and Test Exception 24590 PTF TEF RT-11-00003, Rev. 0 (Meehan 2011). This testing focused on column tests evaluating the impact of elevated temperature on resin degradation over an extended period of time and batch contacts evaluating the impact on Cs loading over a broad range of sodium concentrations (0.1 to 5 M). These changes may be required to alleviate post-filtration precipitation issues and broaden the data range of SRF resin loading under the conditions expected with the new equipment and process changes.« less

DOE Office of Scientific and Technical Information (OSTI.GOV)

Russell, Renee L.; Rinehart, Donald E.; Peterson, Reid A.

Ion exchange using spherical resorcinol-formaldehyde (SRF) resin has been selected by the U.S. Department of Energy’s Office of River Protection (DOE-ORP) for use in the Pretreatment Facility (PTF) of the Hanford Tank Waste Treatment and Immobilization Plant (WTP) and for potential application in at-tank deployment. Numerous studies have shown SRF resin to be effective for removing 137Cs from a wide variety of actual and simulated tank waste supernatants (Adamson et al. 2006; Blanchard et al. 2008; Burgeson et al. 2004; Duignan and Nash 2009; Fiskum et al. 2006a; Fiskum et al. 2006b; Fiskum et al. 2006c; Fiskum et al. 2007;more » Hassan and Adu-Wusu 2003; King et al. 2004; Nash et al. 2006). Prior work at the Pacific Northwest National Laboratory (PNNL) has focused primarily on the loading behavior for 4 to 6 M Na solutions at 25 to 45°C. Recent proposed changes to the WTP ion exchange process baseline indicate that loading may include a broader range of sodium molarities (0.1 to 8 M) and higher temperatures (50°C) to alleviate post-filtration precipitation issues. This report discusses ion exchange loading kinetics testing activities performed in accordance with Test Plan TP-WTPSP-002, Rev. 3.01, which was prepared and approved in response to the Test Specification 24590-PTF-TSP-RT-09-002, Rev. 0 (Lehrman 2010) and Test Exception 24590-PTF-TEF-RT-11-00003, Rev. 0 (Meehan 2011). This testing focused on column tests evaluating the impact of elevated temperature on resin degradation over an extended period of time and batch contacts evaluating the impact on Cs loading over a broad range of sodium concentrations (0.1 to 5 M). These changes may be required to alleviate post-filtration precipitation issues and broaden the data range of SRF resin loading under the conditions expected with the new equipment and process changes.« less

Far-UV HST  Spectroscopy of an Unusual Hydrogen-poor Superluminous Supernova: SN2017egm

NASA Astrophysics Data System (ADS)

Yan, Lin; Perley, D. A.; De Cia, A.; Quimby, R.; Lunnan, R.; Rubin, Kate H. R.; Brown, P. J.

2018-05-01

SN2017egm is the closest (z = 0.03) H-poor superluminous supernova (SLSN-I) detected to date, and a rare example of an SLSN-I in a massive, metal-rich galaxy. We present the HST UV and optical spectra covering 1000–5500 Å, taken at +3 day relative to the peak. Our data reveal two absorption systems at redshifts matching the host galaxy NGC 3191 (z = 0.0307) and its companion galaxy (z = 0.0299) 73″ apart. Weakly damped Lyα absorption lines are detected at these two redshifts, with H I column densities of (3.0 ± 0.8) × 1019 and (3.7 ± 0.9) × 1019 cm‑2, respectively. This is an order of magnitude smaller than the H I column densities in the disks of nearby galaxies (>1010 M ⊙) and suggests that SN2017egm is on the near side of NGC 3191 and has a low host extinction (E(B ‑ V) ∼ 0.007). Using unsaturated metal absorption lines, we find that the host of SN2017egm probably has a solar or higher metallicity and is unlikely to be a dwarf companion to NGC 3191. Comparison of early-time UV spectra of SN2017egm, Gaia16apd, iPTF13ajg, and PTF12dam finds that the continuum at λ > 2800 Å is well fit by a blackbody, whereas the continuum at λ < 2800 Å is considerably below the model. The degree of UV suppression varies from source to source, with the 1400–2800 Å continuum flux ratio of 1.5 for Gaia16apd and 0.4 for iPTF13ajg. This cannot be explained by the differences in magnetar power or blackbody temperature. Finally, the UV spectra reveal a common set of seven broad absorption features and their equivalent widths are similar (within a factor of 2) among the four events.

The Openness That Closes: Allan Bloom and the Contemporary University.

ERIC Educational Resources Information Center

Orwin, Clifford; Forbes, H. D.

1991-01-01

Discusses the contemporary university in Canada, focusing on Allan Bloom's "The Closing of the American Mind" which analyzes problems in today's education. The paper calls Bloom's book an unrivaled diagnosis of the impasse of the university, and it examines Bloom's relativistic principles. (SM)

Trophic linkage of a temperate intertidal macrobenthic food web under opportunistic macroalgal blooms: A stable isotope approach.

PubMed

Park, Hyun Je; Han, Eunah; Lee, Young-Jae; Kang, Chang-Keun

2016-10-15

The effects of blooms of opportunistic green macroalgae, Ulva prolifera, on the trophic structure of the macrobenthic food web in a temperate intertidal zone on the western coast of Korea were evaluated using carbon and nitrogen stable isotopes. Biomasses of Ulva and microphytobenthos (MPB) increased significantly at the macroalgae-bloom and the non-bloom sites, respectively, from March to September 2011. The δ(13)C values of most the consumers were arrayed between those of MPB and Ulva at both sites, and differed according to feeding strategies at the macroalgae-bloom site. Seasonally increasing magnitudes in δ(13)C and δ(15)N values of consumers were much steeper at the macroalgae-bloom site than at the non-bloom site. Our findings provide evidence that blooming green macroalgae play a significant role as a basal resource supporting the intertidal macrobenthic food web and their significance varies with feeding strategies of consumers as well as the resource availability. Copyright © 2016 Elsevier Ltd. All rights reserved.

Microcystin in cyanobacterial blooms in a Chilean lake.

PubMed

Campos, V; Cantarero, S; Urrutia, H; Heinze, R; Wirsing, B; Neumann, U; Weckesser, J

1999-05-01

Cyanobacterial blooms dominated by Microcystis sp. occurred in lake Rocuant ("marisma", near Concepción/Chile) in February 1995 and 1996. In the bloom samples collected in both years the hepatotoxin microcystin was detected by RP-HPLC in both samples and in the sample of 1995 also by a toxicity assay using primary rat hepatocytes. In the bloom of 1995, the microcystin content of the dry bloom biomass was determined to be 130 micrograms/g on the basis of the RP-HPLC peak area and 800 micrograms/g on the basis of the rat hepatotoxicity assay, respectively. In the bloom of 1996, RP-HPLC analysis revealed a microcystin content of 8.13 micrograms/g bloom material dry weight. In this year no hepatotoxicity was measured using a concentration range up to 0.8 mg (d. w.) of bloom material per ml in the rat hepatotoxicity assay. This is the first report on the detection of microcystins in Chilean water bodies.

Turtle: identifying frequent k-mers with cache-efficient algorithms.

PubMed

Roy, Rajat Shuvro; Bhattacharya, Debashish; Schliep, Alexander

2014-07-15

Counting the frequencies of k-mers in read libraries is often a first step in the analysis of high-throughput sequencing data. Infrequent k-mers are assumed to be a result of sequencing errors. The frequent k-mers constitute a reduced but error-free representation of the experiment, which can inform read error correction or serve as the input to de novo assembly methods. Ideally, the memory requirement for counting should be linear in the number of frequent k-mers and not in the, typically much larger, total number of k-mers in the read library. We present a novel method that balances time, space and accuracy requirements to efficiently extract frequent k-mers even for high-coverage libraries and large genomes such as human. Our method is designed to minimize cache misses in a cache-efficient manner by using a pattern-blocked Bloom filter to remove infrequent k-mers from consideration in combination with a novel sort-and-compact scheme, instead of a hash, for the actual counting. Although this increases theoretical complexity, the savings in cache misses reduce the empirical running times. A variant of method can resort to a counting Bloom filter for even larger savings in memory at the expense of false-negative rates in addition to the false-positive rates common to all Bloom filter-based approaches. A comparison with the state-of-the-art shows reduced memory requirements and running times. The tools are freely available for download at http://bioinformatics.rutgers.edu/Software/Turtle and http://figshare.com/articles/Turtle/791582. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Blooms of Cyanobacteria on the Potomac River 1

PubMed Central

Krogmann, David W.; Butalla, Ruth; Sprinkle, James

1986-01-01

Blooms of cyanobacteria have appeared on the Potomac River near Washington, DC in years of drought and low river volume. The location of the bloom may be related to tidal activity. In 1983, the bloom of Microcystis aeruginosa used ammonia as its nitrogen source and contained low levels of toxic peptides. Cells collected from this bloom proved to be homogeneous and were an excellent source material for the isolation of proteins involved in photosynthesis. PMID:16664682

Bloom's Taxonomy: Improving Assessment and Teaching-Learning Process

ERIC Educational Resources Information Center

Chandio, Muhammad Tufail; Pandhiani, Saima Murtaza; Iqbal, Rabia

2016-01-01

This research study critically analyzes the scope and contribution of Bloom's Taxonomy in both assessment and teaching-learning process. Bloom's Taxonomy consists of six stages, namely; remembering, understanding, applying, analyzing, evaluating and creating and moves from lower degree to the higher degree. The study applies Bloom's Taxonomy to…

[Comparison of the botanic morphology and blooming characteristics of four cultivars of rose].

PubMed

Wang, Kang-cai; Tang, Xiao-qing; Sheng, Min-li; Xu, Xiao-lan; Fang, Zhen

2004-05-01

To establish identifying method for further development and utilization by studying botanic morphology and blooming characteristics of four varieties of roses in Jiangsu province. Flower-bud and flower-form were observed by dissection and plant modality and blooming process were investigated. The flower form and plant modality was obviously different among the 4 varieties of roses. The process of differentiation of flower-bud could be divided into five stages: the transformation of nutritive growth cone, the occurrence and development of sepal, formation of petal primordium, formation of pistil and stamen. The blooming process was made up of flower-bud period, display-petal period, initiating blooming period, blooming period, withering period and corresponding biological marks.

Harmful algal bloom smart device application: using image analysis and machine learning techniques for early classification of harmful algal blooms (SETAC presentation)

EPA Science Inventory

Reports of toxic cyanobacterial blooms, also known as Harmful Algal Blooms (HABS) have increased drastically in recent years. HABS impact human health from causing mild allergies to liver damage and death. The Ecological Stewardship Institute (ESI) at Northern Kentucky Universi...

Hydrogen cyanamide on citrus: preliminary data on phytotoxicity and influence on flush in potted and field trees

USDA-ARS?s Scientific Manuscript database

Bloom in individual citrus trees typically continues for more than a month in south Florida, with even greater bloom duration within most orchard blocks because of variation in bloom timing between trees. Prolonged bloom contributes to variable fruit maturity as harvest approaches and increases seve...

Trichodesmium blooms and warm-core ocean surface features in the Arabian Sea and the Bay of Bengal.

PubMed

Jyothibabu, R; Karnan, C; Jagadeesan, L; Arunpandi, N; Pandiarajan, R S; Muraleedharan, K R; Balachandran, K K

2017-08-15

Trichodesmium is a bloom-forming, diazotrophic, non-heterocystous cyanobacteria widely distributed in the warmer oceans, and their bloom is considered a 'biological indication' of stratification and nitrogen limitation in the ocean surface layer. In the first part of this paper, based on the retrospective analyses of the ocean surface mesoscale features associated with 59 Trichodesmium bloom incidences recorded in the past, 32 from the Arabian Sea and the Bay of Bengal, and 27 from the rest of the world, we have showed that warm-core features have an inducing effect on bloom formation. In the second part, we have considered the environmental preferences of Trichodesmium bloom based on laboratory and field studies across the globe, and proposed a view about how warm-core features could provide an inducing pre-requisite condition for the bloom formation in the Arabian Sea and the Bay of Bengal. Proposed that the subsurface waters of warm-core features maintain more likely chances for the conducive nutrient and light conditions required for the triggering of the blooms. Copyright © 2017 Elsevier Ltd. All rights reserved.

Variations of morphology and photosynthetic performances of Ulva prolifera during the whole green tide blooming process in the Yellow Sea.

PubMed

Zhang, Jian Heng; Huo, Yuan Zi; Zhang, Zheng Long; Yu, Ke Feng; He, Qing; Zhang, Lin Hui; Yang, Li Li; Xu, Ren; He, Pei Min

2013-12-01

Since 2007, the world's largest macroalgal blooms have occurred along the coastal area of the Yellow Sea for 6 consecutive years. In 2012, shipboard surveying and satellite remote sensing were used to monitor the whole blooming process. The blooms originated in Rudong sea area of the South Yellow Sea where bloom patches were of dark green and filamentous thalli were the dominant morphology. The scale of the blooms reached its peak size in Rizhao sea area of the North Yellow Sea, and decreased promptly and became insignificant in Qingdao coast where the blooms turned yellow, mostly with air sac blades. Meanwhile, vegetative cells of the green tide algae changed into cytocysts gradually from which germ cells were released as the blooms drifted northward. Additionally, chlorophyll contents and fluorescence activity of free-floating thalli in the North Yellow Sea were both significantly lower than that in the South Yellow Sea. Those studies presented here contributed to increasing our understanding about how the green tide declined gradually in the North Yellow Sea. Copyright © 2013 Elsevier Ltd. All rights reserved.

A strong summer phytoplankton bloom southeast of Vietnam in 2007, a transitional year from El Niño to La Niña.

PubMed

Zhao, Hui; Zhao, Jian; Sun, Xingli; Chen, Fajin; Han, Guoqi

2018-01-01

Summer upwelling occurs frequently off the southeast Vietnam coast in the western South China Sea (SCS), where summer phytoplankton blooms generally appear during June-August. In this study, we investigate inter-annual variation of Ekman pumping and offshore transport, and its modulation on summer blooms southeast of Vietnam. The results indicate that there are low intensities of summer blooms in El Niño years, under higher sea surface temperatures (SST) and weaker winds. However, a different pattern of monthly chlorophyll a (Chl-a) blooms occurred in summer of 2007, a transitional stage from El Niño to La Niña, with weak (strong) wind and high (low) SST before (after) early July. There is a weak phytoplankton bloom before July 2007 and a strong phytoplankton bloom after July 2007. The abrupt change in the wind intensity may enhance the upwelling associated with Ekman pumping and offshore Ekman transport, bringing more high-nutrient water into the upper layer from the subsurface, and thus leading to an evident Chl-a bloom in the region.

Prevention of Cyanobacterial Blooms Using Nanosilica: A Biomineralization-Inspired Strategy.

PubMed

Xiong, Wei; Tang, Yiming; Shao, Changyu; Zhao, Yueqi; Jin, Biao; Huang, Tingting; Miao, Ya'nan; Shu, Lei; Ma, Weimin; Xu, Xurong; Tang, Ruikang

2017-11-07

Cyanobacterial blooms represent a significant threat to global water resources because blooming cyanobacteria deplete oxygen and release cyanotoxins, which cause the mass death of aquatic organisms. In nature, a large biomass volume of cyanobacteria is a precondition for a bloom, and the cyanobacteria buoyancy is a key parameter for inducing the dense accumulation of cells on the water surface. Therefore, blooms will likely be curtailed if buoyancy is inhibited. Inspired by diatoms with naturally generated silica shells, we found that silica nanoparticles can be spontaneously incorporated onto cyanobacteria in the presence of poly(diallyldimethylammonium chloride), a cationic polyelectrolyte that can simulate biosilicification proteins. The resulting cyanobacteria-SiO 2 complexes can remain sedimentary in water. This strategy significantly inhibited the photoautotrophic growth of the cyanobacteria and decreased their biomass accumulation, which could effectively suppress harmful bloom events. Consequently, several of the adverse consequences of cyanobacteria blooms in water bodies, including oxygen consumption and microcystin release, were significantly alleviated. Based on the above results, we propose that the silica nanoparticle treatment has the potential for use as an efficient strategy for preventing cyanobacteria blooms.

Factors controlling the spatio-temporal distribution of the 2009 Chattonella antiqua bloom in the Yatsushiro Sea, Japan

NASA Astrophysics Data System (ADS)

Aoki, Kazuhiro; Onitsuka, Goh; Shimizu, Manabu; Kuroda, Hiroshi; Matsuyama, Yukihiko; Kimoto, Katsunori; Matsuo, Hitoshi; Kitadai, Yuuki; Sakurada, Kiyonari; Nishi, Hiromi; Tahara, Yoshio

2012-12-01

A harmful bloom due to the raphidophycean flagellate, Chattonella antiqua, was found in the Yatsushiro Sea, western Kyushu, Japan, from the end of July to the beginning of August 2009. The bloom resulted in enormous economic damage to cultured finfish production in aquaculture farms concentrated in the southwestern area. To investigate the factors controlling the spatio-temporal distribution of the bloom, data analysis and numerical simulations were conducted using field monitoring data and a three-dimensional hydrodynamic model coupled to a Lagrangian particle-tracking model. Results of the monitoring data analysis showed that the initial development of the C. antiqua bloom occurred in Kusuura Bay and the northeastern area near the mouth of the Kuma River, and subsequently the bloom expanded rapidly to the whole area. The simulation results indicated that the source region of the widespread bloom was not Kusuura Bay but the northeastern area. The southwestward evolution of the bloom was primarily controlled by the passive transport due to the surface residual current driven by fresh water discharge from the Kuma River and northeasterly winds. On the favorable conditions of river discharge and wind, the massive bloom of C. antiqua that formed in the northeastern area was quickly transported southwestward within a few days.

The timing and the magnitude of spring phytoplankton blooms and their relationship with physical forcing in the central Yellow Sea in 2009

NASA Astrophysics Data System (ADS)

Zhou, Feng; Xuan, Jiliang; Huang, Daji; Liu, Chenggang; Sun, Jun

2013-12-01

The development of phytoplankton bloom and its association with physical forcing is examined through an interdisciplinary field-work conducted in the vicinity of the central trough of the southern Yellow Sea during March-April 2009, with the aid of a surface Lagrangian drifter deployed at the bloom site. Bloom patches were detected using an empirical value and two of them were traced by the drifter for a period of several days respectively. Both of them appears as thin-layer subsurface chlorophyll a maximum (SCM) throughout the tracing, although their dominant phytoplankton species are not identical at all. The magnitude as well as the onset of these two blooms is different from each other, but both found to be relevant to local oceanic and meteorological conditions. Both of them demonstrate that the changes in the stability of hydrographical structure, especially at layers around the SCM, take a substantial role in triggering or terminating the blooming processes. Those changes in meteorological conditions, like wind speed and directions, solar radiation, are short and cause daily or synoptic scale variations in phytoplankton concentrations, but the frequency of northerly wind events predating the bloom season has a positive effect on the occurrence of spring blooms. The horizontal advection is another contributing factor indicated by the drifter which accounts for the bloom extinction at the station B20. In addition, due to the weak orbital horizontal movement, the bloom above the central trough persists longer and larger.

Contributions of meteorology to the phenology of cyanobacterial blooms: implications for future climate change.

PubMed

Zhang, Min; Duan, Hongtao; Shi, Xiaoli; Yu, Yang; Kong, Fanxiang

2012-02-01

Cyanobacterial blooms are often a result of eutrophication. Recently, however, their expansion has also been found to be associated with changes in climate. To elucidate the effects of climatic variables on the expansion of cyanobacterial blooms in Taihu, China, we analyzed the relationships between climatic variables and bloom events which were retrieved by satellite images. We then assessed the contribution of each climate variable to the phenology of blooms using multiple regression models. Our study demonstrates that retrieving ecological information from satellite images is meritorious for large-scale and long-term ecological research in freshwater ecosystems. Our results show that the phenological changes of blooms at an inter-annual scale are strongly linked to climate in Taihu during the past 23 yr. Cyanobacterial blooms occur earlier and last longer with the increase of temperature, sunshine hours, and global radiation and the decrease of wind speed. Furthermore, the duration increases when the daily averages of maximum, mean, and minimum temperature each exceed 20.3 °C, 16.7 °C, and 13.7 °C, respectively. Among these factors, sunshine hours and wind speed are the primary contributors to the onset of the blooms, explaining 84.6% of their variability over the past 23 yr. These factors are also good predictors of the variability in the duration of annual blooms and determined 58.9% of the variability in this parameter. Our results indicate that when nutrients are in sufficiently high quantities to sustain the formation of cyanobacterial blooms, climatic variables become crucial in predicting cyanobacterial bloom events. Climate changes should be considered when we evaluate how much the amount of nutrients should be reduced in Taihu for lake management. Copyright © 2011 Elsevier Ltd. All rights reserved.

The Genetic Diversity of Mesodinium and Associated Cryptophytes

PubMed Central

Johnson, Matthew D.; Beaudoin, David J.; Laza-Martinez, Aitor; Dyhrman, Sonya T.; Fensin, Elizabeth; Lin, Senjie; Merculief, Aaron; Nagai, Satoshi; Pompeu, Mayza; Setälä, Outi; Stoecker, Diane K.

2016-01-01

Ciliates from the genus Mesodinium are globally distributed in marine and freshwater ecosystems and may possess either heterotrophic or mixotrophic nutritional modes. Members of the Mesodinium major/rubrum species complex photosynthesize by sequestering and maintaining organelles from cryptophyte prey, and under certain conditions form periodic or recurrent blooms (= red tides). Here, we present an analysis of the genetic diversity of Mesodinium and cryptophyte populations from 10 environmental samples (eight globally dispersed habitats including five Mesodinium blooms), using group-specific primers for Mesodinium partial 18S, ITS, and partial 28S rRNA genes as well as cryptophyte large subunit RuBisCO genes (rbcL). In addition, 22 new cryptophyte and four new M. rubrum cultures were used to extract DNA and sequence rbcL and 18S-ITS-28S genes, respectively, in order to provide a stronger phylogenetic context for our environmental sequences. Bloom samples were analyzed from coastal Brazil, Chile, two Northeastern locations in the United States, and the Pribilof Islands within the Bering Sea. Additionally, samples were also analyzed from the Baltic and Barents Seas and coastal California under non-bloom conditions. Most blooms were dominated by a single Mesodinium genotype, with coastal Brazil and Chile blooms composed of M. major and the Eastern USA blooms dominated by M. rubrum variant B. Sequences from all four blooms were dominated by Teleaulax amphioxeia-like cryptophytes. Non-bloom communities revealed more diverse assemblages of Mesodinium spp., including heterotrophic species and the mixotrophic Mesodinium chamaeleon. Similarly, cryptophyte diversity was also higher in non-bloom samples. Our results confirm that Mesodinium blooms may be caused by M. major, as well as multiple variants of M. rubrum, and further implicate T. amphioxeia as the key cryptophyte species linked to these phenomena in temperate and subtropical regions. PMID:28066344

The Genetic Diversity of Mesodinium and Associated Cryptophytes.

PubMed

Johnson, Matthew D; Beaudoin, David J; Laza-Martinez, Aitor; Dyhrman, Sonya T; Fensin, Elizabeth; Lin, Senjie; Merculief, Aaron; Nagai, Satoshi; Pompeu, Mayza; Setälä, Outi; Stoecker, Diane K

2016-01-01

Ciliates from the genus Mesodinium are globally distributed in marine and freshwater ecosystems and may possess either heterotrophic or mixotrophic nutritional modes. Members of the Mesodinium major/rubrum species complex photosynthesize by sequestering and maintaining organelles from cryptophyte prey, and under certain conditions form periodic or recurrent blooms (= red tides). Here, we present an analysis of the genetic diversity of Mesodinium and cryptophyte populations from 10 environmental samples (eight globally dispersed habitats including five Mesodinium blooms), using group-specific primers for Mesodinium partial 18S, ITS, and partial 28S rRNA genes as well as cryptophyte large subunit RuBisCO genes ( rbcL ). In addition, 22 new cryptophyte and four new M. rubrum cultures were used to extract DNA and sequence rbcL and 18S-ITS-28S genes, respectively, in order to provide a stronger phylogenetic context for our environmental sequences. Bloom samples were analyzed from coastal Brazil, Chile, two Northeastern locations in the United States, and the Pribilof Islands within the Bering Sea. Additionally, samples were also analyzed from the Baltic and Barents Seas and coastal California under non-bloom conditions. Most blooms were dominated by a single Mesodinium genotype, with coastal Brazil and Chile blooms composed of M. major and the Eastern USA blooms dominated by M. rubrum variant B. Sequences from all four blooms were dominated by Teleaulax amphioxeia -like cryptophytes. Non-bloom communities revealed more diverse assemblages of Mesodinium spp., including heterotrophic species and the mixotrophic Mesodinium chamaeleon . Similarly, cryptophyte diversity was also higher in non-bloom samples. Our results confirm that Mesodinium blooms may be caused by M. major , as well as multiple variants of M. rubrum , and further implicate T. amphioxeia as the key cryptophyte species linked to these phenomena in temperate and subtropical regions.

Spring and fall phytoplankton blooms in a productive subarctic ecosystem, the eastern Bering Sea, during 1995-2011

NASA Astrophysics Data System (ADS)

Sigler, Michael F.; Stabeno, Phyllis J.; Eisner, Lisa B.; Napp, Jeffrey M.; Mueter, Franz J.

2014-11-01

The timing and magnitude of phytoplankton blooms in subarctic ecosystems often strongly influence the amount of energy that is transferred through subsequent trophic pathways. In the eastern Bering Sea, spring bloom timing has been linked to ice retreat timing and production of zooplankton and fish. A large part of the eastern Bering Sea shelf (~500 km wide) is ice-covered during winter and spring. Four oceanographic moorings have been deployed along the 70-m depth contour of the eastern Bering Sea shelf with the southern location occupied annually since 1995, the two northern locations since 2004 and the remaining location since 2001. Chlorophyll a fluorescence data from the four moorings provide 37 realizations of a spring bloom and 33 realizations of a fall bloom. We found that in the eastern Bering Sea: if ice was present after mid-March, spring bloom timing was related to ice retreat timing (p<0.001, df=1, 24); if ice was absent or retreated before mid-March, a spring bloom usually occurred in May or early June (average day 148, SE=3.5, n=11). A fall bloom also commonly occurred, usually in late September (average day 274, SE=4.2, n=33), and its timing was not significantly related to the timing of storms (p=0.88, df=1, 27) or fall water column overturn (p=0.49, df=1, 27). The magnitudes of the spring and fall blooms were correlated (p=0.011, df=28). The interval between the spring and fall blooms varied between four to six months depending on year and location. We present a hypothesis to explain how the large crustacean zooplankton taxa Calanus spp. likely respond to variation in the interval between blooms (spring to fall and fall to spring).

Summer diatom blooms in the North Pacific subtropical gyre: 2008-2009.

PubMed

Villareal, Tracy A; Brown, Colbi G; Brzezinski, Mark A; Krause, Jeffrey W; Wilson, Cara

2012-01-01

The summertime North Pacific subtropical gyre has widespread phytoplankton blooms between Hawaii and the subtropical front (∼30°N) that appear as chlorophyll (chl) increases in satellite ocean color data. Nitrogen-fixing diatom symbioses (diatom-diazotroph associations: DDAs) often increase 10(2)-10(3) fold in these blooms and contribute to elevated export flux. In 2008 and 2009, two cruises targeted satellite chlorophyll blooms to examine DDA species abundance, chlorophyll concentration, biogenic silica concentration, and hydrography. Generalized observations that DDA blooms occur when the mixed layer depth is < 70 m are supported, but there is no consistent relationship between mixed layer depth, bloom intensity, or composition; regional blooms between 22-34°N occur within a broader temperature range (21-26°C) than previously reported. In both years, the Hemiaulus-Richelia and Rhizosolenia-Richelia DDAs increased 10(2)-10(3) over background concentrations within satellite-defined bloom features. The two years share a common trend of Hemiaulus dominance of the DDAs and substantial increases in the >10 µm chl a fraction (∼40-90+% of total chl a). Integrated diatom abundance varied 10-fold over <10 km. Biogenic silica concentration tracked diatom abundance, was dominated by the >10 µm size fraction, and increased up to 5-fold in the blooms. The two years differed in the magnitude of the surface chl a increase (2009>2008), the abundance of pennate diatoms within the bloom (2009>2008), and the substantially greater mixed layer depth in 2009. Only the 2009 bloom had sufficient chl a in the >10 µm fraction to produce the observed ocean color chl increase. Blooms had high spatial variability; ocean color images likely average over numerous small events over time and space scales that exceed the individual event scale. Summertime DDA export flux noted at the Hawaii time-series Sta. ALOHA is probably a generalized feature of the eastern N. Pacific north to the subtropical front.

An overview of cyanobacterial bloom occurrences and research in Africa over the last decade.

PubMed

Ndlela, L L; Oberholster, P J; Van Wyk, J H; Cheng, P H

2016-12-01

Cyanobacterial blooms are a current cause for concern globally, with vital water sources experiencing frequent and increasingly toxic blooms in the past decade. These increases are resultant of both anthropogenic and natural factors, with climate change being the central concern. Of the more affected parts of the world, Africa has been considered particularly vulnerable due to its historical predisposition and lag in social economic development. This review collectively assesses the available information on cyanobacterial blooms in Africa as well as any visible trends associated with reported occurrences over the last decade. Of the 54 countries in Africa, only 21 have notable research information in the area of cyanobacterial blooms within the last decade, although there is substantial reason to attribute these blooms as some of the major water quality threats in Africa collectively. The collected information suggests that civil wars, disease outbreaks and inadequate infrastructure are at the core of Africa's delayed advancement. This is even more so in the area of cyanobacteria related research, with 11 out of 21 countries having recorded toxicity and physicochemical parameters related to cyanobacterial blooms. Compared to the rest of the continent, peripheral countries are at the forefront of research related to cyanobacteria, with countries such as Angola having sufficient rainfall, but poor water quality with limited information on bloom occurrences. An assessment of the reported blooms found nitrogen concentrations to be higher in the water column of more toxic blooms, validating recent global studies and indicating that phosphorous is not the only factor to be monitored in bloom mitigation. Blooms occurred at low TN: TP ratios and at temperatures above 12°C. Nitrogen was linked to toxicity and temperature also had a positive effect on bloom occurrence and toxicity. Microcystis was the most ubiquitous of the cyanobacterial strains reported in Africa and the one most frequently toxic. Cylindrospermopsis was reported more in the dry, north and western parts of the continent countries as opposed to the rest of the continent, whilst Anabaena was more frequent on the south eastern regions. In light of the entire continent, the inadequacy in reported blooms and advances in this area of research require critical intervention and action. Copyright © 2016 Elsevier B.V. All rights reserved.

Privacy-Preserving Distributed Information Sharing

DTIC Science & Technology

2006-07-01

80 B.2.4 Analysis for Bloom Filters . . . . . . . . . . . . . . . . . . . . . . . . . . . 81 B.3 Details of One...be chosen by slightly adjusting the analysis given in the proof of Theorem 26. 59 Using Bloom Filters. Bloom filters provide a compact probabilistic...representation of set membership [6]. Instead of using T filters, we can use a combined Bloom filter. This achieves the same asymptotic communication

Harmful Algal Bloom Webinar

EPA Pesticide Factsheets

The problem is complex. Excessive nitrogen and phosphorous levels can cause harmful algal blooms. Different algal/cyanobacteria strains bloom under different conditions. Different strains produce different toxins at varying amounts.

Bio-optical observations of the 2004 Labrador Sea phytoplankton bloom

NASA Astrophysics Data System (ADS)

Strutton, Peter G.; Martz, Todd R.; Degrandpre, Michael D.; McGillis, Wade R.; Drennan, William M.; Boss, Emmanuel

2011-11-01

A unique time series of moored bio-optical measurements documented the 2004 spring-summer bloom in the southern Labrador Sea. In situ and satellite chlorophyll data show that chlorophyll levels in the 2004 bloom were at the upper end of those typically observed in this region. Satellite chlorophyll and profiling float temperature/salinity data show that the main bloom, which typically peaks in June/July, is often preceded by ephemeral mixed layer shoaling and a lesser, short-lived bloom in May; this was the case in 2004. The particulate backscatter to beam attenuation ratio (bbp[470 nm]/Cp[660 nm]) showed peaks in the relative abundance of small particles at bloom initiation and during the decline of the bloom, while larger particles dominated during the bloom. Chlorophyll/Cp and bbp/chlorophyll were correlated with carbon export and dominated by changes in the pigment per cell associated with lower light levels due to enhanced attenuation of solar radiation during the bloom. An NPZ (nutrients, phytoplankton, zooplankton) model captured the phytoplankton bloom and an early July peak in zooplankton. Moored acoustic Doppler current profiler (ADCP) data showed an additional mid-June peak in zooplankton biomass which was attributed to egg-laying copepods. The data reported here represent one of the few moored time series of Cp, bbp and chlorophyll extending over several months in an open ocean region. Interpretation of data sets such as this will become increasingly important as these deployments become more commonplace via ocean observing systems. Moreover, these data contribute to the understanding of biological-physical coupling in a biogeochemically important, yet poorly studied region.

Aerial Images and Convolutional Neural Network for Cotton Bloom Detection.

PubMed

Xu, Rui; Li, Changying; Paterson, Andrew H; Jiang, Yu; Sun, Shangpeng; Robertson, Jon S

2017-01-01

Monitoring flower development can provide useful information for production management, estimating yield and selecting specific genotypes of crops. The main goal of this study was to develop a methodology to detect and count cotton flowers, or blooms, using color images acquired by an unmanned aerial system. The aerial images were collected from two test fields in 4 days. A convolutional neural network (CNN) was designed and trained to detect cotton blooms in raw images, and their 3D locations were calculated using the dense point cloud constructed from the aerial images with the structure from motion method. The quality of the dense point cloud was analyzed and plots with poor quality were excluded from data analysis. A constrained clustering algorithm was developed to register the same bloom detected from different images based on the 3D location of the bloom. The accuracy and incompleteness of the dense point cloud were analyzed because they affected the accuracy of the 3D location of the blooms and thus the accuracy of the bloom registration result. The constrained clustering algorithm was validated using simulated data, showing good efficiency and accuracy. The bloom count from the proposed method was comparable with the number counted manually with an error of -4 to 3 blooms for the field with a single plant per plot. However, more plots were underestimated in the field with multiple plants per plot due to hidden blooms that were not captured by the aerial images. The proposed methodology provides a high-throughput method to continuously monitor the flowering progress of cotton.

Floating Algae Blooms in the East China Sea

NASA Astrophysics Data System (ADS)

Qi, Lin; Hu, Chuanmin; Wang, Mengqiu; Shang, Shaoling; Wilson, Cara

2017-11-01

A floating algae bloom in the East China Sea was observed in Moderate Resolution Imaging Spectroradiometer (MODIS) imagery in May 2017. Using satellite imagery from MODIS, Visible Infrared Imaging Radiometer Suite, Geostationary Ocean Color Imager, and Ocean Land Imager, and combined with numerical particle tracing experiments and laboratory experiments, we examined the history of this bloom as well as similar blooms in previous years and attempted to trace the bloom source and identify the algae type. Results suggest that one bloom origin is offshore Zhejiang coast where algae slicks have appeared in satellite imagery almost every February-March since 2012. Following the Kuroshio Current and Taiwan Warm Current, these "initial" algae slicks are first transported to the northeast to reach South Korea (Jeju Island) and Japan coastal waters (up to 135°E) by early April 2017, and then transported to the northwest to enter the Yellow Sea by the end of April. The transport pathway covers an area known to be rich in Sargassum horneri, and spectral analysis suggests that most of the algae slicks may contain large amount of S. horneri. The bloom covers a water area of 160,000 km2 with pure algae coverage of 530 km2, which exceeds the size of most Ulva blooms that occur every May-July in the Yellow Sea. While blooms of smaller size also occurred in previous years and especially in 2015, the 2017 bloom is hypothesized to be a result of record-high water temperature, increased light availability, and continuous expansion of Porphyra aquaculture along the East China Sea coast.

Fungal community dynamics during a marine dinoflagellate (Noctiluca scintillans) bloom.

PubMed

Sun, Jing-Yun; Song, Yu; Ma, Zhi-Ping; Zhang, Huai-Jing; Yang, Zhong-Duo; Cai, Zhong-Hua; Zhou, Jin

2017-10-01

Contamination and eutrophication have caused serious ecological events (such as algal bloom) in coastal area. During this ecological process, microbial community structure is critical for algal bloom succession. The diversity and composition of bacteria and archaea communities in algal blooms have been widely investigated; however, those of fungi are poorly understood. To fill this gap, we used pyrosequencing and correlation approaches to assess fungal patterns and associations during a dinoflagellate (Noctiluca scintillans) bloom. Phylum level fungal types were predominated by Ascomycota, Chytridiomycota, Mucoromycotina, and Basidiomycota. At the genus level drastic changes were observed with Hysteropatella, Malassezia and Saitoella dominating during the initial bloom stage, while Malassezia was most abundant (>50%) during onset and peak-bloom stages. Saitoella and Lipomyces gradually became more abundant and, in the decline stage, contributed almost 70% of sequences. In the terminal stage of the bloom, Rozella increased rapidly to a maximum of 50-60%. Fungal population structure was significantly influenced by temperature and substrate (N and P) availability (P < 0.05). Inter-specific network analyses demonstrated that Rozella and Saitoella fungi strongly impacted the ecological trajectory of N. scintillans. The functional prediction show that symbiotrophic fungi was dominated in the onset stage; saprotroph type was the primary member present during the exponential growth period; whereas pathogentroph type fungi enriched in decline phase. Overall, fungal communities and functions correlated significantly with N. scintillans processes, suggesting that they may regulate dinoflagellate bloom fates. Our results will facilitate deeper understanding of the ecological importance of marine fungi and their roles in algal bloom formation and collapse. Copyright © 2017 Elsevier Ltd. All rights reserved.

Challenges in modelling spatiotemporally varying phytoplankton blooms in the Northwestern Arabian Sea and Gulf of Oman

NASA Astrophysics Data System (ADS)

Sedigh Marvasti, S.; Gnanadesikan, A.; Bidokhti, A. A.; Dunne, J. P.; Ghader, S.

2015-07-01

We examine interannual variability of phytoplankton blooms in northwestern Arabian Sea and Gulf of Oman. Satellite data (SeaWIFS ocean color) shows two climatological blooms in this region, a wintertime bloom peaking in February and a summertime bloom peaking in September. A pronounced anti-correlation between the AVISO sea surface height anomaly (SSHA) and chlorophyll is found during the wintertime bloom. On a regional scale, interannual variability of the wintertime bloom is thus dominated by cyclonic eddies which vary in location from one year to another. These results were compared against the outputs from three different 3-D Earth System models. We show that two coarse (1°) models with the relatively complex biogeochemistry (TOPAZ) capture the annual cycle but neither eddies nor the interannual variability. An eddy-resolving model (GFDL CM2.6) with a simpler biogeochemistry (miniBLING) displays larger interannual variability, but overestimates the wintertime bloom and captures eddy-bloom coupling in the south but not in the north. The southern part of the domain is a region with a much sharper thermocline and nutricline relatively close to the surface, in which eddies modulate diffusive nutrient supply to the surface (a mechanism not previously emphasized in the literature). We suggest that for the model to simulate the observed wintertime blooms within cyclones, it will be necessary to represent this relatively unusual nutrient structure as well as the cyclonic eddies. This is a challenge in the Northern Arabian Sea as it requires capturing the details of the outflow from the Persian Gulf.

Bacterial community transcription patterns during a marine phytoplankton bloom.

PubMed

Rinta-Kanto, Johanna M; Sun, Shulei; Sharma, Shalabh; Kiene, Ronald P; Moran, Mary Ann

2012-01-01

Bacterioplankton consume a large proportion of photosynthetically fixed carbon in the ocean and control its biogeochemical fate. We used an experimental metatranscriptomics approach to compare bacterial activities that route energy and nutrients during a phytoplankton bloom compared with non-bloom conditions. mRNAs were sequenced from duplicate bloom and control microcosms 1 day after a phytoplankton biomass peak, and transcript copies per litre of seawater were calculated using an internal mRNA standard. Transcriptome analysis revealed a potential novel mechanism for enhanced efficiency during carbon-limited growth, mediated through membrane-bound pyrophosphatases [V-type H(+)-translocating; hppA]; bloom bacterioplankton participated less in this metabolic energy scavenging than non-bloom bacterioplankton, with possible implications for differences in growth yields on organic substrates. Bloom bacterioplankton transcribed more copies of genes predicted to increase cell surface adhesiveness, mediated by changes in bacterial signalling molecules related to biofilm formation and motility; these may be important in microbial aggregate formation. Bloom bacterioplankton also transcribed more copies of genes for organic acid utilization, suggesting an increased importance of this compound class in the bioreactive organic matter released during phytoplankton blooms. Transcription patterns were surprisingly faithful within a taxon regardless of treatment, suggesting that phylogeny broadly predicts the ecological roles of bacterial groups across 'boom' and 'bust' environmental backgrounds. © 2011 Society for Applied Microbiology and Blackwell Publishing Ltd.

Cyanobacteria blooms: effects on aquatic ecosystems.

PubMed

Havens, Karl E

2008-01-01

Cyanobacteria become increasingly dominant as concentrations of TP and TN increase during eutrophication of lakes, rivers and estuaries. Temporal dynamics of cyanobacteria blooms are variable--in some systems persistent blooms occur in summer to fall, whereas in other systems blooms are more sporadic. Cyanobacteria blooms have a wide range of possible biological impacts including potential toxic effects on other algae, invertebrates and fish, impacts to plants and benthic algae due to shading, and impacts to food web function as large inedible algae produce a bottleneck to C and energy flow in the plankton food web. In lakes with dense blooms of cyanobacteria, accumulation of organic material in lake sediments and increased bacterial activity also may lead to anoxic conditions that alter the structure of benthic macro-invertebrates. Diffusive internal P loading may increase, and hypolimnetic anoxia may lead to a loss of piscivorous fish that require a summer cold water refuge in temperate lakes. Ecosystem changes associated with frequent blooms may result in delayed response of lakes, rivers and estuaries to external nutrient load reduction. Despite numerous case studies and a vast literature on species-specific responses, community level effects of cyanobacterial blooms are not well understood--in particular the realized impacts of toxins and changes in food web structure/function. These areas require additional research given the prevalence of toxic blooms in the nation's lakes, rivers and coastal waters--systems that provide a wide range of valued ecosystem services.

A drinking water crisis in Lake Taihu, China: linkage to climatic variability and lake management.

PubMed

Qin, Boqiang; Zhu, Guangwei; Gao, Guang; Zhang, Yunlin; Li, Wei; Paerl, Hans W; Carmichael, Wayne W

2010-01-01

In late May, 2007, a drinking water crisis took place in Wuxi, Jiangsu Province, China, following a massive bloom of the toxin producing cyanobacteria Microcystis spp. in Lake Taihu, China's third largest freshwater lake. Taihu was the city's sole water supply, leaving approximately two million people without drinking water for at least a week. This cyanobacterial bloom event began two months earlier than previously documented for Microcystis blooms in Taihu. This was attributed to an unusually warm spring. The prevailing wind direction during this period caused the bloom to accumulate at the shoreline near the intake of the water plant. Water was diverted from the nearby Yangtze River in an effort to flush the lake of the bloom. However, this management action was counterproductive, because it produced a current which transported the bloom into the intake, exacerbating the drinking water contamination problem. The severity of this microcystin toxin containing bloom and the ensuing drinking water crisis were attributable to excessive nutrient enrichment; however, a multi-annual warming trend extended the bloom period and amplified its severity, and this was made worse by unanticipated negative impacts of water management. Long-term management must therefore consider both the human and climatic factors controlling these blooms and their impacts on water supply in this and other large lakes threatened by accelerating eutrophication.

Predicting potentially toxigenic Pseudo-nitzschia blooms in the Chesapeake Bay

USGS Publications Warehouse

Anderson, C.R.; Sapiano, M.R.P.; Prasad, M.B.K.; Long, W.; Tango, P.J.; Brown, C.W.; Murtugudde, R.

2010-01-01

Harmful algal blooms are now recognized as a significant threat to the Chesapeake Bay as they can severely compromise the economic viability of important recreational and commercial fisheries in the largest estuary of the United States. This study describes the development of empirical models for the potentially domoic acid-producing Pseudo-nitzschia species complex present in the Bay, developed from a 22-year time series of cell abundance and concurrent measurements of hydrographic and chemical properties. Using a logistic Generalized Linear Model (GLM) approach, model parameters and performance were compared over a range of Pseudo-nitzschia bloom thresholds relevant to toxin production by different species. Small-threshold blooms (???10cellsmL-1) are explained by time of year, location, and variability in surface values of phosphate, temperature, nitrate plus nitrite, and freshwater discharge. Medium- (100cellsmL-1) to large- threshold (1000cellsmL-1) blooms are further explained by salinity, silicic acid, dissolved organic carbon, and light attenuation (Secchi) depth. These predictors are similar to other models for Pseudo-nitzschia blooms on the west coast, suggesting commonalities across ecosystems. Hindcasts of bloom probabilities at a 19% bloom prediction point yield a Heidke Skill Score of -53%, a Probability of Detection ~75%, a False Alarm Ratio of ~52%, and a Probability of False Detection ~9%. The implication of possible future changes in Baywide nutrient stoichiometry on Pseudo-nitzschia blooms is discussed. ?? 2010 Elsevier B.V.

The correlation between Prorocentrum donghaiense blooms and the Taiwan warm current in the East China Sea - evidence for the "Pelagic Seed Bank" hypothesis.

PubMed

Dai, Xinfeng; Lu, Douding; Guan, Weibing; Xia, Ping; Wang, Hongxia; He, Piaoxia; Zhang, Dongsheng

2013-01-01

During the last two decades, large-scale high biomass algal blooms of the dinoflagellate Prorocentrum donghaiense Lu have occurred frequently in the East China Sea (ECS). The role of increasing nutrient concentrations in driving those blooms is well-established, but the source population that initiates them is poorly understood. We hypothesized that the front of Taiwan Warm Current (TWC) may serve as a 'seed bank' that initiates P. donghaiense blooms in the ECS, as the physiochemical conditions in the TWC are suitable for the growth of P. donghaiense. In order to test this hypothesis, two surveys at different spatio-temporal scales were conducted in 2010 and 2011. We found a strong correlation in space and time between the abundance of P. donghaiense and the TWC. The spatial extent of the P. donghaiense bloom coincided with the TWC front in both 2010 and 2011. During the early development of the blooms, P. donghaiense concentration was highest at the TWC front, and then the bloom mass shifted inshore over the course of our 2011 survey. The TWC also moved inshore, albeit after the appearance of P. donghaiense. Overall, these results support our hypothesis that P. donghaiense blooms develop from the population at the TWC front in the ECS, suggesting the role of the ocean current front as a seed bank to dinoflagellate blooms.

Application of Multispectral and Hyperspectral Remote Sensing For Detection of Freshwater Harmful Algal Blooms

NASA Astrophysics Data System (ADS)

Kudela, R. M.; Accorsi, E.; Austerberry, D.; Palacios, S. L.

2013-12-01

Freshwater Cyanobacterial Harmful algal blooms (CHABs) represent a pressing and apparently increasing threat to both human and environmental health. In California, toxin producing blooms of several species, including Aphanizomenon, Microcystis, Lyngbya, and Anabaena are common; toxins from these blooms have been linked to impaired drinking water, domestic and wild animal deaths, and increasing evidence for toxin transfer to coastal marine environments, including the death of several California sea otters, a threatened marine species. California scientists and managers are under increasing pressure to identify and mitigate these potentially toxic blooms, but point-source measurements and grab samples have been less than effective. There is increasing awareness that these toxic events are both spatially widespread and ephememeral, leading to the need for better monitoring methods applicable to large spatial and temporal scales. Based on monitoring in several California water bodies, it appears that Aphanizomenon blooms frequently precede dangerous levels of toxins from Microcystis. We are exploring new detection methods for identifying CHABs and potentially distinguishing between blooms of the harmful cyanobacteria Aphanizomenon and Microcystis using remote sensing reflectance from a variety of airborne and satellite sensors. We suggest that Aphanizomenon blooms could potentially be used as an early warning of more highly toxic subsequent blooms, and that these methods, combined with better toxin monitoring, can lead to improved understanding and prediction of CHABs by pinpointing problematic watersheds.

A Preliminary Bloom's Taxonomy Assessment of End-of-Chapter Problems in Business School Textbooks

ERIC Educational Resources Information Center

Marshall, Jennings B.; Carson, Charles M.

2008-01-01

This article examines textbook problems used in a sampling of some of the most common core courses found in schools of business to ascertain what level of learning, as defined by Bloom's Taxonomy, is required to provide a correct answer. A set of working definitions based on Bloom's Taxonomy (Bloom & Krathwohl, 1956) was developed for the six…

3. GENERAL VIEW OF REMAINS OF 40" BLOOMING MILL; THE ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

3. GENERAL VIEW OF REMAINS OF 40" BLOOMING MILL; THE ENGINE ROOM CONTAINING THE MESTA-CORLISS STEAM ENGINE, IS LOCATED AT THE FAR END OF THE MILL AS SEEN TO THE FAR RIGHT (THE BUILDING WITH THE SHED ROOF). - Republic Iron & Steel Company, Youngstown Works, Blooming Mill & Blooming Mill Engines, North of Poland Avenue, Youngstown, Mahoning County, OH

A strong summer phytoplankton bloom southeast of Vietnam in 2007, a transitional year from El Niño to La Niña

PubMed Central

Chen, Fajin; Han, Guoqi

2018-01-01

Summer upwelling occurs frequently off the southeast Vietnam coast in the western South China Sea (SCS), where summer phytoplankton blooms generally appear during June-August. In this study, we investigate inter-annual variation of Ekman pumping and offshore transport, and its modulation on summer blooms southeast of Vietnam. The results indicate that there are low intensities of summer blooms in El Niño years, under higher sea surface temperatures (SST) and weaker winds. However, a different pattern of monthly chlorophyll a (Chl-a) blooms occurred in summer of 2007, a transitional stage from El Niño to La Niña, with weak (strong) wind and high (low) SST before (after) early July. There is a weak phytoplankton bloom before July 2007 and a strong phytoplankton bloom after July 2007. The abrupt change in the wind intensity may enhance the upwelling associated with Ekman pumping and offshore Ekman transport, bringing more high-nutrient water into the upper layer from the subsurface, and thus leading to an evident Chl-a bloom in the region. PMID:29342148

Rainfall-enhanced blooming in typhoon wakes

PubMed Central

Lin, Y.-C.; Oey, L.-Y.

2016-01-01

Strong phytoplankton blooming in tropical-cyclone (TC) wakes over the oligotrophic oceans potentially contributes to long-term changes in global biogeochemical cycles. Yet blooming has traditionally been discussed using anecdotal events and its biophysical mechanics remain poorly understood. Here we identify dominant blooming patterns using 16 years of ocean-color data in the wakes of 141 typhoons in western North Pacific. We observe right-side asymmetric blooming shortly after the storms, attributed previously to sub-mesoscale re-stratification, but thereafter a left-side asymmetry which coincides with the left-side preference in rainfall due to the large-scale wind shear. Biophysical model experiments and observations demonstrate that heavier rainfall freshens the near-surface water, leading to stronger stratification, decreased turbulence and enhanced blooming. Our results suggest that rainfall plays a previously unrecognized, critical role in TC-induced blooming, with potentially important implications for global biogeochemical cycles especially in view of the recent and projected increases in TC-intensity that harbingers stronger mixing and heavier rain under the storm. PMID:27545899

Mesoscale Eddies Control the Timing of Spring Phytoplankton Blooms: A Case Study in the Japan Sea

NASA Astrophysics Data System (ADS)

Maúre, E. R.; Ishizaka, J.; Sukigara, C.; Mino, Y.; Aiki, H.; Matsuno, T.; Tomita, H.; Goes, J. I.; Gomes, H. R.

2017-11-01

Satellite Chlorophyll a (CHL) data were used to investigate the influence of mesoscale anticyclonic eddies (AEs) and cyclonic eddies (CEs) on the timing of spring phytoplankton bloom initiation around the Yamato Basin (133-139°E and 35-39.5°N) in the Japan Sea, for the period 2002-2011. The results showed significant differences between AEs and CEs in the timing and initiation mechanism of the spring phytoplankton bloom. Blooms were initiated earlier in CEs which were characterized by shallow mixed-layer depths (< 100 m). The early blooming preceded the end of winter cooling (i.e., while net heat flux (Q0) is still negative) and is initiated by the increased average light within the shallow mixed-layer depth. Conversely, blooms appeared in the AEs despite deeper mixed-layer depth (> 100 m) but close to the commencement of positive Q0. This suggests that the relaxation of turbulent mixing is crucial for the bloom initiation in AEs.

Effects of fertilizers used in agricultural fields on algal blooms

NASA Astrophysics Data System (ADS)

Chakraborty, Subhendu; Tiwari, P. K.; Sasmal, S. K.; Misra, A. K.; Chattopadhyay, Joydev

2017-06-01

The increasing occurrence of algal blooms and their negative ecological impacts have led to intensified monitoring activities. This needs the proper identification of the most responsible factor/factors for the bloom formation. However, in natural systems, algal blooms result from a combination of factors and from observation it is difficult to identify the most important one. In the present paper, using a mathematical model we compare the effects of three human induced factors (fertilizer input in agricultural field, eutrophication due to other sources than fertilizers, and overfishing) on the bloom dynamics and DO level. By applying a sophisticated sensitivity analysis technique, we found that the increasing use of fertilizers in agricultural field causes more rapid algal growth and decreases DO level much faster than eutrophication from other sources and overfishing. We also look at the mechanisms how fertilizer input rate affects the algal bloom dynamics and DO level. The model can be helpful for the policy makers in determining the influential factors responsible for the bloom formation.

Rainfall-enhanced blooming in typhoon wakes.

PubMed

Lin, Y-C; Oey, L-Y

2016-08-22

Strong phytoplankton blooming in tropical-cyclone (TC) wakes over the oligotrophic oceans potentially contributes to long-term changes in global biogeochemical cycles. Yet blooming has traditionally been discussed using anecdotal events and its biophysical mechanics remain poorly understood. Here we identify dominant blooming patterns using 16 years of ocean-color data in the wakes of 141 typhoons in western North Pacific. We observe right-side asymmetric blooming shortly after the storms, attributed previously to sub-mesoscale re-stratification, but thereafter a left-side asymmetry which coincides with the left-side preference in rainfall due to the large-scale wind shear. Biophysical model experiments and observations demonstrate that heavier rainfall freshens the near-surface water, leading to stronger stratification, decreased turbulence and enhanced blooming. Our results suggest that rainfall plays a previously unrecognized, critical role in TC-induced blooming, with potentially important implications for global biogeochemical cycles especially in view of the recent and projected increases in TC-intensity that harbingers stronger mixing and heavier rain under the storm.

Rainfall-enhanced blooming in typhoon wakes

NASA Astrophysics Data System (ADS)

Lin, Y.-C.; Oey, L.-Y.

2016-08-01

Strong phytoplankton blooming in tropical-cyclone (TC) wakes over the oligotrophic oceans potentially contributes to long-term changes in global biogeochemical cycles. Yet blooming has traditionally been discussed using anecdotal events and its biophysical mechanics remain poorly understood. Here we identify dominant blooming patterns using 16 years of ocean-color data in the wakes of 141 typhoons in western North Pacific. We observe right-side asymmetric blooming shortly after the storms, attributed previously to sub-mesoscale re-stratification, but thereafter a left-side asymmetry which coincides with the left-side preference in rainfall due to the large-scale wind shear. Biophysical model experiments and observations demonstrate that heavier rainfall freshens the near-surface water, leading to stronger stratification, decreased turbulence and enhanced blooming. Our results suggest that rainfall plays a previously unrecognized, critical role in TC-induced blooming, with potentially important implications for global biogeochemical cycles especially in view of the recent and projected increases in TC-intensity that harbingers stronger mixing and heavier rain under the storm.

Rainfall-enhanced blooming in typhoon wakes

NASA Astrophysics Data System (ADS)

Lin, Y.; Oey, L. Y.

2016-12-01

Strong phytoplankton blooming in tropical-cyclone (TC) wakes over the oligotrophic oceans potentially contributes to long-term changes in global biogeochemical cycles. Yet blooming has traditionally been discussed using anecdotal events and its biophysical mechanics remain poorly understood. Here we identify dominant blooming patterns using 16 years of ocean-color data in the wakes of 141 typhoons in western North Pacific. We observe right-side asymmetric blooming shortly after the storms, attributed previously to sub-mesoscale re-stratification, but thereafter a left-side asymmetry which coincides with the left-side preference in rainfall due to the large-scale wind shear. Biophysical model experiments and observations demonstrate that heavier rainfall freshens the near-surface water, leading to stronger stratification, decreased turbulence and enhanced blooming. Our results suggest that rainfall plays a previously unrecognized, critical role in TC-induced blooming, with potentially important implications for global biogeochemical cycles especially in view of the recent and projected increases in TC-intensity that harbingers stronger mixing and heavier rain under the storm.

Traumatized refugees: morbidity, treatment and predictors of outcome.

PubMed

Buhmann, Caecilie Böck

2014-08-01

Despite large numbers of traumatized refugees, little is known about effective treatment of war trauma in refugees and immigrants. Few studies evaluating treatment have been published and most studies are follow-up studies with methodological limitations and little comparability across studies. The purpose of the PhD is to characterize transcultural trauma patients in Denmark needing psychiatric treatment with regards to psychopathology and predictors of mental health and to evaluate the effects of the treatment. Two studies reported in 4 papers form the basis of the thesis. FORLOB (Paper 1-3) was a follow-up study that included all patients receiving treatment at the Competence Center for Transcultural Psychiatry in Copenhagen from April 2008 to February 2010. Patients completed self-ratings of symptoms of PTSD, depression and anxiety as well as level of functioning and quality of life (HTQ, HSCL-25, SDS & WHO-5) before treatment and after treatment. Associations of co-morbid diagnoses and predictors of the patients' health condition were examined with linear and logistic regression and Pearson's correlation coefficients. Treatment in FORLOB consisted of a combination of Sertraline, Mianserin, psycho-education and Trauma-Focused Cognitive Behavioral Therapy (TFCBT). The treatment administered to each patient was monitored in detail and changes in outcome and predictors of change were analyzed. PTF1 (Paper 4) was a randomized controlled clinical trial with 2x2 factorial design (antidepressants, TFCBT, antidepressants & TFCBT, waiting list). Potential participants were screened amongst adult patients referred to the Competence Center for Transcultural Psychiatry in the period June 2009-2011. Patients with PTSD, war trauma and without a psychotic disorder were included. The manualized treatment consisted of weekly sessions with a physician and/or psychologist over a period of 6 months. The treatment effect was evaluated with a combination of self-ratings and blinded and non-blinded observer ratings. Outcome measures included symptoms of PTSD, depression, anxiety, pain and somatization, quality of life and level of functioning (HTQ, HSCL-25, SCL-90, WHO-5, SDS, VAS, Hamilton, GAF). Treatment was offered with translation and screening instruments were translated to the six most common languages in the patient group covering the needs of 92% of patients. In FORLOB, patients had several co-morbidities and not just PTSD. Almost all patients had depression, pain and untreated somatic complaints in addition to PTSD. Furthermore, 36-58% had physical problems they were in treatment for, 9-16% of patients had psychotic symptoms mainly related to their trauma, 27% had enduring personality change due to catastrophic events according to ICD-10 and 46% reported traumatic brain injury. Patients reporting chronic pain had higher symptom scores on HSCL-25 and HTQ and patients with psychotic symptoms scored higher on all symptom clusters on HTQ. At pre-treatment assessment, the patients' level of functioning and quality of life were very low, the majority of patients lived on public subsidies, education levels were low and most patients had a limited social network. In FORLOB, we found a moderate significant change (Cohen's d 0.44-0.67) on all self-report outcome measures (HTQ, HSCL-25, SDS and WHO-5) after combination treatment. We found less improvement in PTSD when patients were receiving public subsidies and less improvement of depression when patients reported pain in the upper extremities. We found a positive association between systematic use of CBT methods and improvement in patient condition. In PTF1, the randomized clinical trial, we found a small, but significant effect of treatment with medicine on blinded observer-ratings of depression and anxiety (Ham-D and Ham-A) and a large effect on non-blinded ratings of level of functioning (GAF-F and GAF-S), in addition to a small effect on self-reported level of functioning and headache (SDS and VAS). Cohen's d calculated as the differences between randomization groups receiving medicine and not receiving medicine ranged from 0.91-1.01 on GAF-F and GAF-S, whereas on the other ratings showing significant change Cohen's d was 0.31-0.41. We did not find any effect of psychotherapy on any outcomes nor any effect of psycho-therapy or medicine on the primary outcome measure, PTSD. Traditionally, treatment of traumatized refugees have focused on PTSD, but this study demonstrates that patients suffer from numerous psychiatric and somatic co-morbidities and the comprehensiveness of PTSD in explaining symptoms of traumatized refugees is questionable. This has implications for the type and implementation of treatment. PTF1 is the largest randomized clinical trial published on the treatment of traumatized refugees. It is a strength of PTF1 that it includes a waiting list control group thereby accounting for any effects due to spontaneous recovery and that treatment modalities are examined separately and in combination. In both FORLOB and PTF1, treatment adherence and patient compliance with treatment was thoroughly documented. Effect sizes were moderate in FORLOB and small in PTF1. There were discrepancies between the results in FORLOB and PTF1 with regards to the effect measured on self-ratings that can only partially be explained by methodological limitations of the follow-up study. Both studies are undertaken under pragmatic and realistic circumstances and the results are therefore relevant to other contexts. Patients are representative of patients in other North-European studies of traumatized refugees but differ from patients in trials published on culturally adapted CBT and Narrative Exposure Therapy.

VizieR Online Data Catalog: White dwarfs in SDSS Stripe 82 (Hernandez Santisteban+, 2018)

NASA Astrophysics Data System (ADS)

Hernandez Santisteban, J. V.; Knigge, C.; Pretorius, M. L.; Sullivan, M.; Warner, B.

2017-08-01

We present the photometrically selected white dwarfs in SDSS Stripe 82, used to find total eclipses or dropouts in the SDSS and PTF surveys. The Table presents the location as measured by SDSS as well as average photometric values of each WD. This data corresponds to the Table B1 in the paper. (1 data file).

The Large Super-Fast Rotators and Asteroidal Spin-Rate Distributions With Large Sky-Field Surveys Using iPTF

NASA Astrophysics Data System (ADS)

Chang, Chan-Kao; Lin, Hsing-Wen; Ip, Wing-Huen; iPTF Team

2016-10-01

In order to look for kilometer-sized super-fast rotators (large SFRs) and understand the spin-rate distributions of small (i.e. D of several kilometers) asteroids, we have been conducting asteroid rotation period surveys of large sky area using intermediate Palomar Transient Factory (iPTF) since 2014. So far, we have observed 261 deg2 with 20 min cadence, 188 deg2 with 10 min cadence, and 65 deg2 with 5 min cadence. From these surveys, we found that the spin-rate distributions of small asteroids at different locations in the main-belt are very similar. Moreover, the distributions of asteroids with 3 < D < 15 km show number decrease along with increase of spin rate for frequency > 5 rev/day, and that of asteroids with D < 3 km have a significant number drop at frequency = 5 rev/day. However, we only discover two new large SFRs and 24 candidates. Comparing with the ordinary asteroids, the population of large SFR seems to be far less than the whole asteroid population. This might indicate a peculiar group of asteroid for large SFRs.

Explaining iPTF14hls as a common-envelope jets supernova

NASA Astrophysics Data System (ADS)

Soker, Noam; Gilkis, Avishai

2018-03-01

We propose a common-envelope jets supernova scenario for the enigmatic supernova iPTF14hls where a neutron star that spirals-in inside the envelope of a massive giant star accretes mass and launches jets that power the ejection of the circumstellar shell and a few weeks later the explosion itself. To account for the kinetic energy of the circumstellar gas and the explosion, the neutron star should accrete a mass of ≈0.3 M⊙. The tens× M⊙ of circumstellar gas that accounts for some absorption lines is ejected, while the neutron star orbits for about one to several weeks inside the envelope of the giant star. In the last hours of the interaction, the neutron star merges with the core, accretes mass, and launches jets that eject the core and the inner envelope to form the explosion itself and the medium where the supernova photosphere resides. The remaining neutron star accretes fallback gas and further powers the supernova. We attribute the 1954 pre-explosion outburst to an eccentric orbit and temporary mass accretion by the neutron star at periastron passage prior to the onset of the common envelope phase.

PATHA: Performance Analysis Tool for HPC Applications

DOE PAGES

Yoo, Wucherl; Koo, Michelle; Cao, Yi; ...

2016-02-18

Large science projects rely on complex workflows to analyze terabytes or petabytes of data. These jobs are often running over thousands of CPU cores and simultaneously performing data accesses, data movements, and computation. It is difficult to identify bottlenecks or to debug the performance issues in these large workflows. In order to address these challenges, we have developed Performance Analysis Tool for HPC Applications (PATHA) using the state-of-art open source big data processing tools. Our framework can ingest system logs to extract key performance measures, and apply the most sophisticated statistical tools and data mining methods on the performance data.more » Furthermore, it utilizes an efficient data processing engine to allow users to interactively analyze a large amount of different types of logs and measurements. To illustrate the functionality of PATHA, we conduct a case study on the workflows from an astronomy project known as the Palomar Transient Factory (PTF). This study processed 1.6 TB of system logs collected on the NERSC supercomputer Edison. Using PATHA, we were able to identify performance bottlenecks, which reside in three tasks of PTF workflow with the dependency on the density of celestial objects.« less

Phase retrieval with tunable phase transfer function based on the transport of intensity equation

NASA Astrophysics Data System (ADS)

Martinez-Carranza, J.; Stepien, P.; Kozacki, T.

2017-06-01

Recovering phase information with Deterministic approaches as the Transport of Intensity Equation (TIE) has recently emerged as an alternative tool to the interferometric techniques because it is experimentally easy to implement and provides fast and accurate results. Moreover, the potential of employing partially coherent illumination (PCI) in such techniques allow obtaining high quality phase reconstructions providing that the estimation of the corresponding Phase Transfer Function (PTF) is carried out correctly. Hence, accurate estimation of the PTF requires that the physical properties of the optical system are well known. Typically, these parameters are assumed constant in all the set of measurements, which might not be optimal. In this work, we proposed the use of an amplitude Spatial Light Modulator (aSLM) for tuning the degree of coherence of the optical system. The aSLM will be placed at the Fourier plane of the optical system, and then, band pass filters will be displayed. This methodology will perform amplitude modulation of the propagated field and as a result, the state of coherence of the optical system can be modified. Theoretical and experimental results that validate our proposed technique will be shown.

R CORONAE BOREALIS STARS IN M31 FROM THE PALOMAR TRANSIENT FACTORY

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang Sumin; Bildsten, Lars; Cao Yi

2013-04-20

We report the discovery of R Coronae Borealis (RCB) stars in the Andromeda galaxy (M31) using the Palomar Transient Factory (PTF). RCB stars are rare hydrogen-deficient, carbon-rich supergiant variables, most likely the merger products of two white dwarfs. These new RCBs, including two confirmed ones and two candidates, are the first to be found beyond the Milky Way and the Magellanic Clouds. All of M31 RCBs showed >1.5 mag irregular declines over timescales of weeks to months. Due to the limiting magnitude of our data (R Almost-Equal-To 21-22 mag), these RCB stars have R Almost-Equal-To 19.5-20.5 mag at maximum light,more » corresponding to M{sub R} = -4 to -5, making them some of the most luminous RCBs known. Spectra of two objects show that they are warm RCBs, similar to the Milky Way RCBs RY Sgr and V854 Cen. We consider these results, derived from a pilot study of M31 variables, as an important proof-of-concept for the study of rare bright variables in nearby galaxies with the PTF or other synoptic surveys.« less

External eye symptoms in indoor environments.

PubMed

Wolkoff, P

2017-03-01

Eye irritation, for example dry or irritated eyes, is generally among top three reported symptoms in office-like environments, in particular among workplaces with cognitive demanding visual display unit (VDU) work. The symptoms are especially among middle and advanced ages and particularly among women more than men. The symptoms are also among the most commonly reported complaints in the eye clinic. To be in a position to interpret the high prevalence of eye symptoms, a multidisciplinary and integrated approach is necessary that involves the external eye physiology (separate from internal eye effects), eye diseases (evaporative dry eye (DE), aqueous-deficient DE, and gland dysfunctions), and risk factors that aggravate the stability of precorneal tear film (PTF) resulting in hyperosmolarity and initiation of inflammatory reactions. Indoor environmental, occupational and personal risk factors may aggravate the PTF stability; factors such as age, contact lenses, cosmetics, diet, draft, gender, low humidity and high temperature, medication, outdoor and combustion pollutants, and VDU work. Psychological stressors may further influence the reporting behavior of eye symptoms. The impact of the risk factors may occur in a combined and exacerbating manner. © 2016 The Authors. Indoor Air published by John Wiley & Sons Ltd.

Development of optical sciences in Poland

NASA Astrophysics Data System (ADS)

Romaniuk, Ryszard S.

2013-10-01

Research and technical communities for optics, photonics and optoelectronics is grouped in this country in several organizations and institutions. These are: Photonics Society of Poland (PSP), Polish Committee of Optoelectronics of SEP, Photonics Section of KEiT PAN, Laser Club at WAT, and Optics Section of PTF. Each of these communities keeps slightly different specificity. PSP publishes a quarterly journal Photonics Letters of Poland, stimulates international cooperation, and organizes conferences during Industrial Fairs on Innovativeness. PKOpto SEP organizes didactic diploma competitions in optoelectronics. KEiT PAN takes patronage over national conferences in laser technology, optical fiber technology and communications, and photonics applications. SO-PTF has recently taken a decision to organize a cyclic event "Polish Optical Conference". The third edition of this conference PKO'2013 was held in Sandomierz on 30.06-04.07.2013. The conference scientific and technical topics include: quantum and nonlinear optics, photon physics, optic and technology of lasers and other sources of coherent radiation, optoelectronics, optical integrated circuits, optical fibers, medical optics, instrumental optics, optical spectroscopy, optical metrology, new optical materials, applications of optics, teaching in optics. This paper reviews chosen works presented during the III Polish Optical Conference (PKO'2013), representing the research efforts at different national institutions.

Fast γ-Ray Variability in Blazars beyond Redshift 3

NASA Astrophysics Data System (ADS)

Li, Shang; Xia, Zi-Qing; Liang, Yun-Feng; Liao, Neng-Hui; Fan, Yi-Zhong

2018-02-01

High-redshift blazars are one of the most powerful sources in the universe and γ-ray variability carries crucial information about their relativistic jets. In this work we present results of the first systematical temporal analysis of Fermi-LAT data of all known seven γ-ray blazars beyond redshift 3. Significant long-term γ-ray variability is found from five sources in monthly γ-ray light curves, in which three of them are reported for the first time. Furthermore, intraday γ-ray variations are detected from NVSS J053954‑283956 and NVSS J080518+614423. The doubling variability timescale of the former source is limited as short as ≲1 hr (at the source frame). Together with variability amplitude over one order of magnitude, NVSS J053954‑283956 is the most distant γ-ray flaring blazar so far. Meanwhile, intraday optical variability of NVSS J163547+362930 is found based on an archival PTF/iPTF light curve. Benefiting from the multi-wavelength activity of these sources, constraints on their Doppler factors, as well as the locations of the γ-ray radiation region and indications for the SDSS high redshift jetted active galactic nuclei deficit are discussed.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Horesh, Assaf; Kulkarni, Shrinivas R.; Corsi, Alessandra

Only a few cases of Type Ic supernovae (SNe) with high-velocity ejecta (≥0.2 c) have been discovered and studied. Here, we present our analysis of radio and X-ray observations of the Type Ic SN PTF 12gzk. The radio emission declined less than 10 days after explosion, suggesting SN ejecta expanding at high velocity (∼0.3 c). The radio data also indicate that the density of the circumstellar material (CSM) around the supernova is lower by a factor of ∼10 than the CSM around normal Type Ic SNe. PTF 12gzk may therefore be an intermediate event between a 'normal' SN Ic andmore » a gamma-ray-burst-SN-like event. Our observations of this rapidly declining radio SN at a distance of 58 Mpc demonstrates the potential to detect many additional radio SNe, given the new capabilities of the Very Large Array (improved sensitivity and dynamic scheduling), which are currently missed, leading to a biased view of radio SNe Ic. Early optical discovery followed by rapid radio observations would provide a full description of the ejecta velocity distribution and CSM densities around stripped massive star explosions as well as strong clues about the nature of their progenitor stars.« less

Alexandrium fundyense cysts in the Gulf of Maine: long-term time series of abundance and distribution, and linkages to past and future blooms

USGS Publications Warehouse

Anderson, Donald M.; Keafer, Bruce A.; Kleindinst, Judith L.; McGillicuddy, Dennis J.; Martin, Jennifer L.; Norton, Kerry; Pilskaln, Cynthia H.; Smith, Juliette L.; Sherwood, Christopher R.; Butman, Bradford

2014-01-01

Here we document Alexandrium fundyense cyst abundance and distribution patterns over nine years (1997 and 2004–2011) in the coastal waters of the Gulf of Maine (GOM) and identify linkages between those patterns and several metrics of the severity or magnitude of blooms occurring before and after each autumn cyst survey. We also explore the relative utility of two measures of cyst abundance and demonstrate that GOM cyst counts can be normalized to sediment volume, revealing meaningful patterns equivalent to those determined with dry weight normalization. Cyst concentrations were highly variable spatially. Two distinct seedbeds (defined here as accumulation zones with>300 cysts cm−3) are evident, one in the Bay of Fundy (BOF) and one in mid-coast Maine. Overall, seedbed locations remained relatively constant through time, but their area varied 3–4 fold, and total cyst abundance more than 10 fold among years. A major expansion of the mid-coast Maine seedbed occurred in 2009 following an unusually intense A. fundyense bloom with visible red-water conditions, but that feature disappeared by late 2010. The regional system thus has only two seedbeds with the bathymetry, sediment characteristics, currents, biology, and environmental conditions necessary to persist for decades or longer. Strong positive correlations were confirmed between the abundance of cysts in both the 0–1 and the 0–3 cm layers of sediments in autumn and geographic measures of the extent of the bloom that occurred the next year (i.e., cysts→blooms), such as the length of coastline closed due to shellfish toxicity or the southernmost latitude of shellfish closures. In general, these metrics of bloom geographic extent did not correlate with the number of cysts in sediments following the blooms (blooms→cysts). There are, however, significant positive correlations between 0–3 cm cyst abundances and metrics of the preceding bloom that are indicative of bloom intensity or vegetative cell abundance (e.g., cumulative shellfish toxicity, duration of detectable toxicity in shellfish, and bloom termination date). These data suggest that it may be possible to use cyst abundance to empirically forecast the geographic extent of the forthcoming bloom and, conversely, to use other metrics from bloom and toxicity events to forecast the size of the subsequent cyst population as the inoculum for the next year's bloom. This is an important step towards understanding the excystment/encystment cycle in A. fundyense bloom dynamics while also augmenting our predictive capability for this HAB-forming species in the GOM.

Theoretical analysis for scaling law of thermal blooming based on optical phase deference

NASA Astrophysics Data System (ADS)

Sun, Yunqiang; Huang, Zhilong; Ren, Zebin; Chen, Zhiqiang; Guo, Longde; Xi, Fengjie

2016-10-01

In order to explore the laser propagation influence of thermal blooming effect of pipe flow and to analysis the influencing factors, scaling law theoretical analysis of the thermal blooming effects in pipe flow are carry out in detail based on the optical path difference caused by thermal blooming effects in pipe flow. Firstly, by solving the energy coupling equation of laser beam propagation, the temperature of the flow is obtained, and then the optical path difference caused by the thermal blooming is deduced. Through the analysis of the influence of pipe size, flow field and laser parameters on the optical path difference, energy scaling parameters Ne=nTαLPR2/(ρɛCpπR02) and geometric scaling parameters Nc=νR2/(ɛL) of thermal blooming for the pipe flow are derived. Secondly, for the direct solution method, the energy coupled equations have analytic solutions only for the straight tube with Gauss beam. Considering the limitation of directly solving the coupled equations, the dimensionless analysis method is adopted, the analysis is also based on the change of optical path difference, same scaling parameters for the pipe flow thermal blooming are derived, which makes energy scaling parameters Ne and geometric scaling parameters Nc have good universality. The research results indicate that when the laser power and the laser beam diameter are changed, thermal blooming effects of the pipeline axial flow caused by optical path difference will not change, as long as you keep energy scaling parameters constant. When diameter or length of the pipe changes, just keep the geometric scaling parameters constant, the pipeline axial flow gas thermal blooming effects caused by optical path difference distribution will not change. That is to say, when the pipe size and laser parameters change, if keeping two scaling parameters with constant, the pipeline axial flow thermal blooming effects caused by the optical path difference will not change. Therefore, the energy scaling parameters and the geometric scaling parameters can really describe the gas thermal blooming effect in the axial pipe flow. These conclusions can give a good reference for the construction of the thermal blooming test system of laser system. Contrasted with the thermal blooming scaling parameters of the Bradley-Hermann distortion number ND and Fresnel number NF, which were derived based on the change of far field beam intensity distortion, the scaling parameters of pipe flow thermal blooming deduced from the optical path deference variation are very suitable for the optical system with short laser propagation distance, large Fresnel number and obviously changed optical path deference.

Dynamics of Bacterial and Fungal Communities during the Outbreak and Decline of an Algal Bloom in a Drinking Water Reservoir.

PubMed

Zhang, Haihan; Jia, Jingyu; Chen, Shengnan; Huang, Tinglin; Wang, Yue; Zhao, Zhenfang; Feng, Ji; Hao, Huiyan; Li, Sulin; Ma, Xinxin

2018-02-18

The microbial communities associated with algal blooms play a pivotal role in organic carbon, nitrogen and phosphorus cycling in freshwater ecosystems. However, there have been few studies focused on unveiling the dynamics of bacterial and fungal communities during the outbreak and decline of algal blooms in drinking water reservoirs. To address this issue, the compositions of bacterial and fungal communities were assessed in the Zhoucun drinking water reservoir using 16S rRNA and internal transcribed spacer (ITS) gene Illumina MiSeq sequencing techniques. The results showed the algal bloom was dominated by Synechococcus, Microcystis, and Prochlorothrix. The bloom was characterized by a steady decrease of total phosphorus (TP) from the outbreak to the decline period (p < 0.05) while Fe concentration increased sharply during the decline period (p < 0.05). The highest algal biomass and cell concentrations observed during the bloom were 51.7 mg/L and 1.9×108 cell/L, respectively. The cell concentration was positively correlated with CODMn (r = 0.89, p = 0.02). Illumina Miseq sequencing showed that algal bloom altered the water bacterial and fungal community structure. During the bloom, the dominant bacterial genus were Acinetobacter sp., Limnobacter sp., Synechococcus sp., and Roseomonas sp. The relative size of the fungal community also changed with algal bloom and its composition mainly contained Ascomycota, Basidiomycota and Chytridiomycota. Heat map profiling indicated that algal bloom had a more consistent effect upon fungal communities at genus level. Redundancy analysis (RDA) also demonstrated that the structure of water bacterial communities was significantly correlated to conductivity and ammonia nitrogen. Meanwhile, water temperature, Fe and ammonia nitrogen drive the dynamics of water fungal communities. The results from this work suggested that water bacterial and fungal communities changed significantly during the outbreak and decline of algal bloom in Zhoucun drinking water reservoir. Our study highlights the potential role of microbial diversity as a driving force for the algal bloom and biogeochemical cycling of reservoir ecology.

Consortial brown tide − picocyanobacteria blooms in Guantánamo Bay, Cuba

USGS Publications Warehouse

Hall, Nathan S; Litaker, R. Wayne; Kenworthy, W. Judson; Vandersea, Mark W.; Sunda, William G.; Reid, James P.; Slone, Daniel H.; Butler, Susan M.

2018-01-01

A brown tide bloom of Aureoumbra lagunensis developed in Guantánamo Bay, Cuba during a period of drought in 2013 that followed heavy winds and rainfall from Hurricane Sandy in late October 2012. Based on satellite images and water turbidity measurements, the bloom appeared to initiate in January 2013. The causative species (A. lagunensis) was confirmed by microscopic observation, and pigment and genetic analyses of bloom samples collected on May 28 of that year. During that time, A. lagunensis reached concentrations of 900,000 cells ml−1 (28 ppm by biovolume) in the middle portion of the Bay. Samples could not be collected from the northern (Cuban) half of the Bay because of political considerations. Subsequent sampling of the southern half of the Bay in November 2013, April 2014, and October 2014 showed persistent lower concentrations of A. lagunensis, with dominance shifting to the cyanobacterium Synechococcus (up to 33 ppm in April), an algal group that comprised a minor bloom component on May 28. Thus, unlike the brown tide bloom in Laguna Madre, which lasted 8 years, the bloom in Guantánamo Bay was short-lived, much like recent blooms in the Indian River, Florida. Although hypersaline conditions have been linked to brown tide development in the lagoons of Texas and Florida, observed euhaline conditions in Guantánamo Bay (salinity 35–36) indicate that strong hypersalinity is not a requirement for A. lagunensis bloom formation. Microzooplankton biomass dominated by ciliates was high during the observed peak of the brown tide, and ciliate abundance was high compared to other systems not impacted by brown tide. Preferential grazing by zooplankton on non-brown tide species, as shown in A. lagunensis blooms in Texas and Florida, may have been a factor in the development of the Cuban brown tide bloom. However, subsequent selection of microzooplankton capable of utilizing A. lagunensis as a primary food source may have contributed to the short-lived duration of the brown tide bloom in Guantánamo Bay.

Dynamics of Bacterial and Fungal Communities during the Outbreak and Decline of an Algal Bloom in a Drinking Water Reservoir

PubMed Central

Zhang, Haihan; Jia, Jingyu; Chen, Shengnan; Huang, Tinglin; Wang, Yue; Zhao, Zhenfang; Feng, Ji; Hao, Huiyan; Li, Sulin; Ma, Xinxin

2018-01-01

The microbial communities associated with algal blooms play a pivotal role in organic carbon, nitrogen and phosphorus cycling in freshwater ecosystems. However, there have been few studies focused on unveiling the dynamics of bacterial and fungal communities during the outbreak and decline of algal blooms in drinking water reservoirs. To address this issue, the compositions of bacterial and fungal communities were assessed in the Zhoucun drinking water reservoir using 16S rRNA and internal transcribed spacer (ITS) gene Illumina MiSeq sequencing techniques. The results showed the algal bloom was dominated by Synechococcus, Microcystis, and Prochlorothrix. The bloom was characterized by a steady decrease of total phosphorus (TP) from the outbreak to the decline period (p < 0.05) while Fe concentration increased sharply during the decline period (p < 0.05). The highest algal biomass and cell concentrations observed during the bloom were 51.7 mg/L and 1.9×108 cell/L, respectively. The cell concentration was positively correlated with CODMn (r = 0.89, p = 0.02). Illumina Miseq sequencing showed that algal bloom altered the water bacterial and fungal community structure. During the bloom, the dominant bacterial genus were Acinetobacter sp., Limnobacter sp., Synechococcus sp., and Roseomonas sp. The relative size of the fungal community also changed with algal bloom and its composition mainly contained Ascomycota, Basidiomycota and Chytridiomycota. Heat map profiling indicated that algal bloom had a more consistent effect upon fungal communities at genus level. Redundancy analysis (RDA) also demonstrated that the structure of water bacterial communities was significantly correlated to conductivity and ammonia nitrogen. Meanwhile, water temperature, Fe and ammonia nitrogen drive the dynamics of water fungal communities. The results from this work suggested that water bacterial and fungal communities changed significantly during the outbreak and decline of algal bloom in Zhoucun drinking water reservoir. Our study highlights the potential role of microbial diversity as a driving force for the algal bloom and biogeochemical cycling of reservoir ecology. PMID:29463021

Consortial brown tide - picocyanobacteria blooms in Guantánamo Bay, Cuba.

PubMed

Hall, Nathan S; Litaker, R Wayne; Kenworthy, W Judson; Vandersea, Mark W; Sunda, William G; Reid, James P; Slone, Daniel H; Butler, Susan

2018-03-01

A brown tide bloom of Aureoumbra lagunensis developed in Guantánamo Bay, Cuba during a period of drought in 2013 that followed heavy winds and rainfall from Hurricane Sandy in late October 2012. Based on satellite images and water turbidity measurements, the bloom appeared to initiate in January 2013. The causative species (A. lagunensis) was confirmed by microscopic observation, and pigment and genetic analyses of bloom samples collected on May 28 of that year. During that time, A. lagunensis reached concentrations of 900,000 cells ml -1 (28 ppm by biovolume) in the middle portion of the Bay. Samples could not be collected from the northern (Cuban) half of the Bay because of political considerations. Subsequent sampling of the southern half of the Bay in November 2013, April 2014, and October 2014 showed persistent lower concentrations of A. lagunensis, with dominance shifting to the cyanobacterium Synechococcus (up to 33 ppm in April), an algal group that comprised a minor bloom component on May 28. Thus, unlike the brown tide bloom in Laguna Madre, which lasted 8 years, the bloom in Guantánamo Bay was short-lived, much like recent blooms in the Indian River, Florida. Although hypersaline conditions have been linked to brown tide development in the lagoons of Texas and Florida, observed euhaline conditions in Guantánamo Bay (salinity 35-36) indicate that strong hypersalinity is not a requirement for A. lagunensis bloom formation. Microzooplankton biomass dominated by ciliates was high during the observed peak of the brown tide, and ciliate abundance was high compared to other systems not impacted by brown tide. Preferential grazing by zooplankton on non-brown tide species, as shown in A. lagunensis blooms in Texas and Florida, may have been a factor in the development of the Cuban brown tide bloom. However, subsequent selection of microzooplankton capable of utilizing A. lagunensis as a primary food source may have contributed to the short-lived duration of the brown tide bloom in Guantánamo Bay. Copyright © 2018 Elsevier B.V. All rights reserved.

Roles of Ferrous and Sulfide Ions in the Fromation of Algae—Induced Black Bloom in Hyper Eutrophic Freshwater Lakes in China

NASA Astrophysics Data System (ADS)

Shen, Q.; Gao, Q.; Yu, C.; Zhang, L.; Wang, Z.

2016-12-01

Water column hypoxia is one of the most serious threats from eutrophication to large water bodies. In the past several years, black bloom phenomenon has become a serious ecosystem disaster in some important severe eutrophic lakes in China, which caused not only environment degradation but also drinking water crisis. Black color and offensive odour of the water column are two notorious sensory features. High Fe2+ and ΣH2S (ΣS2-=S2-+HS-+H2S) were typical characteristics of the black bloom water. Analysis of the black substances of the black bloom water using X-ray photoelectron spectroscopy indicated that abundant FeS were included in these particulates. The black color of the black bloom water could be attributed to the formation of FeS in the anoxic/anaerobic water column. Field investigation and laboratory incubation experiment indicated that the formation of black bloom was closely related to the Fe2+ and ΣH2S in surface sediments. The Fe2+ concentration in surface sediment pore water was high and showed a release tendency from the sediment water interface to the overlying water during the formation of black bloom, while the similar trend was found in ΣH2S production at sediment water micro-interface. Both Fe2+ and ΣS2- affected by oxic and redox conditions, respectively, contributed to the formation of black bloom significantly. However, ΣS2- was found to be the limiting factor directly controlling the outbreak of black bloom. Analysis of microbioal community diversity demonstrated that sulfate reducing bacteria (SRB) were abundant in the surface sediment of black bloom, which strongly influenced the production and accumulation of ΣH2S and drove the formation of black bloom.

Challenges in modeling spatiotemporally varying phytoplankton blooms in the Northwestern Arabian Sea and Gulf of Oman

NASA Astrophysics Data System (ADS)

Sedigh Marvasti, S.; Gnanadesikan, A.; Bidokhti, A. A.; Dunne, J. P.; Ghader, S.

2016-02-01

Recent years have shown an increase in harmful algal blooms in the Northwest Arabian Sea and Gulf of Oman, raising the question of whether climate change will accelerate this trend. This has led us to examine whether the Earth System Models used to simulate phytoplankton productivity accurately capture bloom dynamics in this region - both in terms of the annual cycle and interannual variability. Satellite data (SeaWIFS ocean color) show two climatological blooms in this region, a wintertime bloom peaking in February and a summertime bloom peaking in September. On a regional scale, interannual variability of the wintertime bloom is dominated by cyclonic eddies which vary in location from one year to another. Two coarse (1°) models with the relatively complex biogeochemistry (TOPAZ) capture the annual cycle but neither eddies nor the interannual variability. An eddy-resolving model (GFDL CM2.6) with a simpler biogeochemistry (miniBLING) displays larger interannual variability, but overestimates the wintertime bloom and captures eddy-bloom coupling in the south but not in the north. The models fail to capture both the magnitude of the wintertime bloom and its modulation by eddies in part because of their failure to capture the observed sharp thermocline and/or nutricline in this region. When CM2.6 is able to capture such features in the Southern part of the basin, eddies modulate diffusive nutrient supply to the surface (a mechanism not previously emphasized in the literature). For the model to simulate the observed wintertime blooms within cyclones, it will be necessary to represent this relatively unusual nutrient structure as well as the cyclonic eddies. This is a challenge in the Northern Arabian Sea as it requires capturing the details of the outflow from the Persian Gulf - something that is poorly done in global models.

Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph.

PubMed

Benoit, Gaëtan; Lemaitre, Claire; Lavenier, Dominique; Drezen, Erwan; Dayris, Thibault; Uricaru, Raluca; Rizk, Guillaume

2015-09-14

Data volumes generated by next-generation sequencing (NGS) technologies is now a major concern for both data storage and transmission. This triggered the need for more efficient methods than general purpose compression tools, such as the widely used gzip method. We present a novel reference-free method meant to compress data issued from high throughput sequencing technologies. Our approach, implemented in the software LEON, employs techniques derived from existing assembly principles. The method is based on a reference probabilistic de Bruijn Graph, built de novo from the set of reads and stored in a Bloom filter. Each read is encoded as a path in this graph, by memorizing an anchoring kmer and a list of bifurcations. The same probabilistic de Bruijn Graph is used to perform a lossy transformation of the quality scores, which allows to obtain higher compression rates without losing pertinent information for downstream analyses. LEON was run on various real sequencing datasets (whole genome, exome, RNA-seq or metagenomics). In all cases, LEON showed higher overall compression ratios than state-of-the-art compression software. On a C. elegans whole genome sequencing dataset, LEON divided the original file size by more than 20. LEON is an open source software, distributed under GNU affero GPL License, available for download at http://gatb.inria.fr/software/leon/.

Temporal and spatial characteristics of harmful algal blooms in Qingdao Waters, China

NASA Astrophysics Data System (ADS)

Yuan, Yongquan; Yu, Zhiming; Song, Xiuxian; Cao, Xihua

2017-03-01

Qingdao waters, including both the semi-enclosed Jiaozhou Bay (JB) and the adjacent water out of JB (OJB), have been the areas that are most frequently affected by harmful algal blooms (HABs) in the western Yellow Sea (west of 124°E). In this research, HAB occurrences in Qingdao waters from 1990 to 2009 were investigated using spatial tools in geographic information system (GIS) and are discussed in terms of their connection to temporal variation. Additionally, the effects of each HAB occurrence were further evaluated using a simple model. The calculated results were then visualized using a GIS software to indicate the effects of HABs in Qingdao waters during the entire period. As a result, the OJB was proven to be responsible for the frequent HAB occurrences in Qingdao waters after 2000, although JB was traditionally believed to be the principle source of HAB occurrences in Qingdao waters. In addition, increasing nitrogen and N/P structure imbalance were essential for increasing HAB occurrences in Qingdao waters throughout the entire period, especially for the recent HAB occurrences in the OJB. The results of this research would improve the current understanding on HAB occurrences in Qingdao waters, which would benefit HAB monitoring and the implementation of a control strategy in China as well.

Nitrogen Fixed By Cyanobacteria Is Utilized By Deposit-Feeders

PubMed Central

Karlson, Agnes M. L.; Gorokhova, Elena; Elmgren, Ragnar

2014-01-01

Benthic communities below the photic zone depend for food on allochthonous organic matter derived from seasonal phytoplankton blooms. In the Baltic Sea, the spring diatom bloom is considered the most important input of organic matter, whereas the contribution of the summer bloom dominated by diazotrophic cyanobacteria is less understood. The possible increase in cyanobacteria blooms as a consequence of eutrophication and climate change calls for evaluation of cyanobacteria effects on benthic community functioning and productivity. Here, we examine utilization of cyanobacterial nitrogen by deposit-feeding benthic macrofauna following a cyanobacteria bloom at three stations during two consecutive years and link these changes to isotopic niche and variations in body condition (assayed as C:N ratio) of the animals. Since nitrogen-fixing cyanobacteria have δ15N close to -2‰, we expected the δ15N in the deposit-feeders to decrease after the bloom if their assimilation of cyanobacteria-derived nitrogen was substantial. We also expected the settled cyanobacteria with their associated microheterotrophic community and relatively high nitrogen content to increase the isotopic niche area, trophic diversity and dietary divergence between individuals (estimated as the nearest neighbour distance) in the benthic fauna after the bloom. The three surface-feeding species (Monoporeia affinis, Macoma balthica and Marenzelleria arctia) showed significantly lower δ15N values after the bloom, while the sub-surface feeder Pontoporeia femorata did not. The effect of the bloom on isotopic niche varied greatly between stations; populations which increased niche area after the bloom had better body condition than populations with reduced niche, regardless of species. Thus, cyanobacterial nitrogen is efficiently integrated into the benthic food webs in the Baltic, with likely consequences for their functioning, secondary production, transfer efficiency, trophic interactions, and intra- and interspecific competition. PMID:25105967

A time-series study of the spring bloom at the Bering Sea ice edge I. Physical processes, chlorophyll and nutrient chemistry

NASA Astrophysics Data System (ADS)

Niebauer, H. J.; Alexander, Vera; Henrichs, Susan M.

1995-12-01

An intense but short-lived phytoplankton bloom develops in the low-salinity melt waters at the edge of the Bering Sea ice as the ice melts and retreats each spring. In spring 1988 we followed the development of this bloom by sampling every 3 h while following a freely drifting drogue in the marginal ice-edge zone for two four-day periods. The first period (29 April-3 May) was at an early stage of the bloom while the second period (10-13 May) was at the peak of the bloom. Early in the bloom, the phytoplankton consumed all the nitrate (˜400 mmoles m -2) initially present in the surface water producing large accumulations of particulate carbon (>1000 mmoles C m -2). By the time of peak chlorophyll concentrations (˜35 mg M -3), nitrate concentrations had been depleted so that the sustained high productivity depended on either recycled or imported nutrients. After this point, there was little net additional accumulation of biomass. From these data plus cruise data from previous years, we find that the Bering Sea ice-edge bloom typically begins in the last week of April and appears to precede blooms in the adjacent ice-free waters by days to weeks. The variability in bloom onset observed over several years is not linked very closely to the large scale climatic variations found in this region, but rather appears to be related to local weather during the end of April and the first part of May, with calm, sunny weather being required to initiate the blooms.

Seasonality of North Atlantic phytoplankton from space: impact of environmental forcing on a changing phenology (1998-2012).

PubMed

González Taboada, Fernando; Anadón, Ricardo

2014-03-01

Seasonal pulses of phytoplankton drive seasonal cycles of carbon fixation and particle sedimentation, and might condition recruitment success in many exploited species. Taking advantage of long-term series of remotely sensed chlorophyll a (1998-2012), we analyzed changes in phytoplankton seasonality in the North Atlantic Ocean. Phytoplankton phenology was analyzed based on a probabilistic characterization of bloom incidence. This approach allowed us to detect changes in the prevalence of different seasonal cycles and, at the same time, to estimate bloom timing and magnitude taking into account uncertainty in bloom detection. Deviations between different sensors stressed the importance of a prolonged overlap between successive missions to ensure a correct assessment of phenological changes, as well as the advantage of semi-analytical chlorophyll algorithms over empirical ones to reduce biases. Earlier and more intense blooms were detected in the subpolar Atlantic, while advanced blooms of less magnitude were common in the Subtropical gyre. In the temperate North Atlantic, spring blooms advanced their timing and decreased in magnitude, whereas fall blooms delayed and increased their intensity. At the same time, the prevalence of locations with a single autumn/winter bloom or with a bimodal seasonal cycle increased, in consonance with a poleward expansion of subtropical conditions. Changes in bloom timing and magnitude presented a clear signature of environmental factors, especially wind forcing, although changes on incident photosynthetically active radiation and sea surface temperature were also important depending on latitude. Trends in bloom magnitude matched changes in mean chlorophyll a during the study period, suggesting that seasonal peaks drive long-term trends in chlorophyll a concentration. Our results link changes in North Atlantic climate with recent trends in the phenology of phytoplankton, suggesting an intensification of these impacts in the near future. © 2013 John Wiley & Sons Ltd.

Nitrogen fixed by cyanobacteria is utilized by deposit-feeders.

PubMed

Karlson, Agnes M L; Gorokhova, Elena; Elmgren, Ragnar

2014-01-01

Benthic communities below the photic zone depend for food on allochthonous organic matter derived from seasonal phytoplankton blooms. In the Baltic Sea, the spring diatom bloom is considered the most important input of organic matter, whereas the contribution of the summer bloom dominated by diazotrophic cyanobacteria is less understood. The possible increase in cyanobacteria blooms as a consequence of eutrophication and climate change calls for evaluation of cyanobacteria effects on benthic community functioning and productivity. Here, we examine utilization of cyanobacterial nitrogen by deposit-feeding benthic macrofauna following a cyanobacteria bloom at three stations during two consecutive years and link these changes to isotopic niche and variations in body condition (assayed as C:N ratio) of the animals. Since nitrogen-fixing cyanobacteria have δ(15)N close to -2‰, we expected the δ(15)N in the deposit-feeders to decrease after the bloom if their assimilation of cyanobacteria-derived nitrogen was substantial. We also expected the settled cyanobacteria with their associated microheterotrophic community and relatively high nitrogen content to increase the isotopic niche area, trophic diversity and dietary divergence between individuals (estimated as the nearest neighbour distance) in the benthic fauna after the bloom. The three surface-feeding species (Monoporeia affinis, Macoma balthica and Marenzelleria arctia) showed significantly lower δ(15)N values after the bloom, while the sub-surface feeder Pontoporeia femorata did not. The effect of the bloom on isotopic niche varied greatly between stations; populations which increased niche area after the bloom had better body condition than populations with reduced niche, regardless of species. Thus, cyanobacterial nitrogen is efficiently integrated into the benthic food webs in the Baltic, with likely consequences for their functioning, secondary production, transfer efficiency, trophic interactions, and intra- and interspecific competition.

Blooming reduces the antioxidant capacity of dark chocolate in rats without lowering its capacity to improve lipid profiles.

PubMed

Shadwell, Naomi; Villalobos, Fatima; Kern, Mark; Hong, Mee Young

2013-05-01

Dark chocolate contains high levels of antioxidants which are linked to a reduced risk of cardiovascular disease. Chocolate blooming occurs after exposure to high temperatures. Although bloomed chocolate is safe for human consumption, it is not known whether or not the biological function of bloomed chocolate is affected. We hypothesized that bloomed chocolate would reduce the antioxidant potential and lipid-lowering properties of chocolate through altered expression of related genes. Thirty Sprague-Dawley rats were divided into 3 groups and fed either the control (CON), regular dark chocolate (RDC), or bloomed dark chocolate (BDC) diet. After 3 weeks, serum lipid levels and antioxidant capacity were measured. Hepatic expression of key genes was determined by real time polymerase chain reaction (PCR). Sensory characteristics of bloomed versus regular chocolate were assessed in 28 semi-trained panelists. Rats fed RDC exhibited greater serum antioxidant capacities compared to the CON (P < .05). Antioxidant levels of BDC were not different from RDC or CON. Both RDC and BDC lowered TG compared to CON (P < .05). The rats fed RDC had higher high-density lipoprotein levels compared to the CON (P < .05). In rats given RDC, fatty acid synthase gene expression was down-regulated and low-density lipoprotein receptor transcription was up-regulated (P < .05). Sensory panelists preferred the appearance and surface smoothness of the regular chocolate compared to bloomed chocolate (P < .001). Although blooming blunted the robust antioxidant response produced by regular dark chocolate, these results suggest that bloomed dark chocolate yields similarly beneficial effects on most blood lipid parameters or biomarkers. However, regular dark chocolate may be more beneficial for the improvement of antioxidant status and modulation of gene expression involved in lipid metabolism and promoted greater sensory ratings. Copyright © 2013 Elsevier Inc. All rights reserved.

7 CFR 51.1356 - Pears grown from late blooms.

Code of Federal Regulations, 2014 CFR

2014-01-01

... (INSPECTION, CERTIFICATION, AND STANDARDS) United States Standards for Pears for Canning Definitions § 51.1356 Pears grown from late blooms. Pears grown from late blooms. Such pears often have excessively long stems...

7 CFR 51.1356 - Pears grown from late blooms.

Code of Federal Regulations, 2013 CFR

2013-01-01

... (INSPECTION, CERTIFICATION, AND STANDARDS) United States Standards for Pears for Canning Definitions § 51.1356 Pears grown from late blooms. Pears grown from late blooms. Such pears often have excessively long stems...

Predicting potentially toxigenic Pseudo-nitzschia blooms in the Chesapeake Bay

NASA Astrophysics Data System (ADS)

Anderson, Clarissa R.; Sapiano, Mathew R. P.; Prasad, M. Bala Krishna; Long, Wen; Tango, Peter J.; Brown, Christopher W.; Murtugudde, Raghu

2010-11-01

Harmful algal blooms are now recognized as a significant threat to the Chesapeake Bay as they can severely compromise the economic viability of important recreational and commercial fisheries in the largest estuary of the United States. This study describes the development of empirical models for the potentially domoic acid-producing Pseudo-nitzschia species complex present in the Bay, developed from a 22-year time series of cell abundance and concurrent measurements of hydrographic and chemical properties. Using a logistic Generalized Linear Model (GLM) approach, model parameters and performance were compared over a range of Pseudo-nitzschia bloom thresholds relevant to toxin production by different species. Small-threshold blooms (≥10 cells mL -1) are explained by time of year, location, and variability in surface values of phosphate, temperature, nitrate plus nitrite, and freshwater discharge. Medium- (100 cells mL -1) to large- threshold (1000 cells mL -1) blooms are further explained by salinity, silicic acid, dissolved organic carbon, and light attenuation (Secchi) depth. These predictors are similar to other models for Pseudo-nitzschia blooms on the west coast, suggesting commonalities across ecosystems. Hindcasts of bloom probabilities at a 19% bloom prediction point yield a Heidke Skill Score of ~53%, a Probability of Detection ˜ 75%, a False Alarm Ratio of ˜ 52%, and a Probability of False Detection ˜9%. The implication of possible future changes in Baywide nutrient stoichiometry on Pseudo-nitzschia blooms is discussed.

Benthic‐pelagic coupling drives non‐seasonal zooplankton blooms and restructures energy flows in shallow tropical lakes

PubMed Central

Schagerl, Michael; Yasindi, Andrew; Singer, Gabriel; Kaggwa, Mary Nakabungo; Winder, Monika

2016-01-01

Abstract Zooplankton blooms are a frequent phenomenon in tropical systems. However, drivers of bloom formation and the contribution of emerging resting eggs are largely unexplored. We investigated the dynamics and the triggers of rotifer blooms in African soda‐lakes and assessed their impact on other trophic levels. A meta‐analysis of rotifer peak densities including abundances of up to 6 × 105 individuals L−1 demonstrated that rotifer bloom formation was uncoupled from the food environment and the seasonality of climatic conditions. A time series with weekly sampling intervals from Lake Nakuru (Kenya) revealed that intrinsic growth factors (food quality and the physicochemical environment) significantly affected rotifer population fluctuations, but were of minor importance for bloom formation. Instead, rotifer bloom formation was linked to sediment resuspension, a prerequisite for hatching of resting‐eggs. Population growth rates exceed pelagic birth rates and simulations of rotifer dynamics confirmed the quantitative importance of rotifer emergence from the sediment egg‐bank and signifying a decoupling of bloom formation from pelagic reproduction. Rotifer blooms led to a top‐down control of small‐sized algae and facilitated a switch to more grazing‐resistant, filamentous cyanobacteria. This shift in phytoplankton composition cascaded up the food chain and triggered the return of filter‐feeding flamingos. Calculations of consequent changes in the lake's energy budget and export of aquatic primary production to terrestrial ecosystems demonstrated the large potential impact of nonseasonal disturbances on the functioning of shallow tropical lakes. PMID:27587899

The costs of respiratory illnesses arising from Florida gulf coast Karenia brevis blooms.

PubMed

Hoagland, Porter; Jin, Di; Polansky, Lara Y; Kirkpatrick, Barbara; Kirkpatrick, Gary; Fleming, Lora E; Reich, Andrew; Watkins, Sharon M; Ullmann, Steven G; Backer, Lorraine C

2009-08-01

Algal blooms of Karenia brevis, a harmful marine algae, occur almost annually off the west coast of Florida. At high concentrations, K. brevis blooms can cause harm through the release of potent toxins, known as brevetoxins, to the atmosphere. Epidemiologic studies suggest that aerosolized brevetoxins are linked to respiratory illnesses in humans. We hypothesized a relationship between K. brevis blooms and respiratory illness visits to hospital emergency departments (EDs) while controlling for environmental factors, disease, and tourism. We sought to use this relationship to estimate the costs of illness associated with aerosolized brevetoxins. We developed a statistical exposure-response model to express hypotheses about the relationship between respiratory illnesses and bloom events. We estimated the model with data on ED visits, K. brevis cell densities, and measures of pollen, pollutants, respiratory disease, and intra-annual population changes. We found that lagged K. brevis cell counts, low air temperatures, influenza outbreaks, high pollen counts, and tourist visits helped explain the number of respiratory-specific ED diagnoses. The capitalized estimated marginal costs of illness for ED respiratory illnesses associated with K. brevis blooms in Sarasota County, Florida, alone ranged from $0.5 to $4 million, depending on bloom severity. Blooms of K. brevis lead to significant economic impacts. The costs of illness of ED visits are a conservative estimate of the total economic impacts. It will become increasingly necessary to understand the scale of the economic losses associated with K. brevis blooms to make rational choices about appropriate mitigation.

Physical and biological oceanographic interaction in the spring bloom at the Bering Sea marginal ice edge zone

NASA Astrophysics Data System (ADS)

Niebauer, H. J.; Alexander, Vera; Henrichs, Susan

1990-12-01

At the edge of the melting sea ice pack in the Bering Sea in spring, physical, biological, and chemical oceanographic processes combine to generate a short-lived, intense phytoplankton bloom that is associated with the retreating ice edge. The bloom begins a week or so before the first of May triggered by insolation and by the low-salinity meltwater stratification in the presence of high nitrate concentrations (˜ > 25 μM). Meltwater (salinity) stratification delineates ice edge blooms from open water blooms where temperature gradients generate the stratification. Five cross-ice sections of temperature, salinity, σt, chlorophyll, and nitrate are presented as a time series from April 27 to May 5 illustrating the bloom. Evidence of two separate but concurrent blooms in the ice edge zone are presented. In addition, meteorological and oceanographic conditions were observed that should have been conducive to ice edge up welling. While significant ice and water movement occurred, upwelling was not observed. Finally, the Bering Sea ice edge spring bloom is compared with other ice edge systems in both hemispheres, showing that initial Bering Sea nitrate concentrations are among the highest observed but quickly become limiting owing to the rapid build up of phytoplankton populations. This primary production is not coupled to the pelagic Zooplankton because Zooplankton are largely absent on account of the cold temperatures. Observed maximum chlorophyll concentrations in the bloom are several times greater than those observed in other systems.

Harmful Algal Bloom Hotspots Really Are Hot: A Case Study from Monterey Bay, California

NASA Astrophysics Data System (ADS)

Kudela, R. M.; Anderson, C.; Birch, J. M.; Bowers, H.; Caron, D. A.; Chao, Y.; Doucette, G.; Farrara, J. D.; Gellene, A. G.; Negrey, K.; Howard, M. D.; Ryan, J. P.; Scholin, C. A.; Smith, J.; Sukhatme, G.

2015-12-01

Monterey Bay, California is one of several recognized hotspots for harmful algal blooms along the US west coast, particularly for the toxigenic diatom Pseudo-nitzschia, which produces domoic acid and is responsible for Amnesic Shellfish Poisoning. Historical observations have linked bloom activity to anomalously warm conditions with weak and sporadic upwelling. In particular, blooms appear to be associated with El Niño conditions. Monterey, as with much of the US west coast, experienced unusual warm conditions in spring and summer 2014, leading to multiple ecosystem effects including massive algal blooms, concentration of apex predators nearshore, and unusually high levels of domoic acid. As the warm anomalies continued and strengthened into 2015, Monterey (and much of the west coast) has been experiencing the largest and most toxic algal bloom recorded in the last 15 years, as well as unprecedented coccolithophore blooms associated with warm, nutrient-depleted waters. With the strengthening El Niño conditions developing in summer 2015, it is possible that 2016 will result in a third consecutive year of unusually toxic algal blooms. Using a combination of historical observations, intensive field studies, and predictive models we explore the hypothesis that these warm anomalies lead to shifts in the typical upwelling-dominated food web leading to a collapse of the ecosystem towards the coast, unusual algal blooms, and enhanced trophic transfer of toxins, resulting in magnified negative impacts to wildlife and, potentially, humans.

Detection of Coccolithophore Blooms in Ocean Color Satellite Imagery: a Generalized Approach for Use with Multiple Sensors

NASA Technical Reports Server (NTRS)

Moore, Timothy; Dowell, Mark; Franz, Bryan A.

2012-01-01

A generalized coccolithophore bloom classifier has been developed for use with ocean color imagery. The bloom classifier was developed using extracted satellite reflectance data from SeaWiFS images screened by the default bloom detection mask. In the current application, we extend the optical water type (OWT) classification scheme by adding a new coccolithophore bloom class formed from these extracted reflectances. Based on an in situ coccolithophore data set from the North Atlantic, the detection levels with the new scheme were between 1,500 and 1,800 coccolithophore cellsmL and 43,000 and 78,000 lithsmL. The detected bloom area using the OWT method was an average of 1.75 times greater than the default bloom detector based on a collection of SeaWiFS 1 km imagery. The versatility of the scheme is shown with SeaWiFS, MODIS Aqua, CZCS and MERIS imagery at the 1 km scale. The OWT scheme was applied to the daily global SeaWiFS imagery mission data set (years 19972010). Based on our results, average annual coccolithophore bloom area was more than two times greater in the southern hemisphere compared to the northern hemi- sphere with values of 2.00 106 km2 and 0.75 106 km2, respectively. The new algorithm detects larger bloom areas in the Southern Ocean compared to the default algorithm, and our revised global annual average of 2.75106 km2 is dominated by contributions from the Southern Ocean.

An Efficient Index Dissemination in Unstructured Peer-to-Peer Networks

NASA Astrophysics Data System (ADS)

Takahashi, Yusuke; Izumi, Taisuke; Kakugawa, Hirotsugu; Masuzawa, Toshimitsu

Using Bloom filters is one of the most popular and efficient lookup methods in P2P networks. A Bloom filter is a representation of data item indices, which achieves small memory requirement by allowing one-sided errors (false positive). In the lookup scheme besed on the Bloom filter, each peer disseminates a Bloom filter representing indices of the data items it owns in advance. Using the information of disseminated Bloom filters as a clue, each query can find a short path to its destination. In this paper, we propose an efficient extension of the Bloom filter, called a Deterministic Decay Bloom Filter (DDBF) and an index dissemination method based on it. While the index dissemination based on a standard Bloom filter suffers performance degradation by containing information of too many data items when its dissemination radius is large, the DDBF can circumvent such degradation by limiting information according to the distance between the filter holder and the items holders, i. e., a DDBF contains less information for faraway items and more information for nearby items. Interestingly, the construction of DDBFs requires no extra cost above that of standard filters. We also show by simulation that our method can achieve better lookup performance than existing ones.

The role of hydrographic parameters, measured from a ship of opportunity, in bloom formation of Karenia mikimotoi in the English Channel

NASA Astrophysics Data System (ADS)

Hartman, S. E.; Hartman, M. C.; Hydes, D. J.; Smythe-Wright, D.; Gohin, F.; Lazure, P.

2014-12-01

Unusually high chlorophyll values (~ 14 mg Chl m- 3 at 5 m depth), recorded on a ship of opportunity (SOO) in July 2010, indicated the occurrence of a potential Harmful Algal Bloom (HAB) in the Western approaches of the English Channel. This bloom, located at 49.7°N, 3.2°W was observed via complementary datasets. These included data from samples collected for microscopic phytoplankton identification, information from satellite maps to follow geographical bloom development and in situ data to identify hydrographic factors related to bloom initiation. The relationships between chlorophyll-fluorescence, temperature, salinity and wind speed were examined. The intense summer bloom predominantly consisted of the dinoflagellate Karenia mikimotoi and followed an increase in sea surface temperature (to 18.5 °C). A mid-channel bloom of this magnitude along the SOO route was last seen in 2003. In both years the peak biomass was associated with K. mikimotoi blooms, which occurred at the same location and coincided with the least saline, warmest water and lowest wind speeds. This study demonstrates that ships of opportunity are a useful tool to identify and track HAB events through continuous in situ measurements and for the frequent sampling opportunities that they provide.

Intravascular optical coherence tomography light scattering artifacts: merry-go-rounding, blooming, and ghost struts

PubMed Central

Mancuso, J. Jacob; Halaney, David L.; Elahi, Sahar; Ho, Derek; Wang, Tianyi; Ouyang, Yongjian; Dijkstra, Jouke; Milner, Thomas E.; Feldman, Marc D.

2014-01-01

Abstract. We sought to elucidate the mechanisms underlying two common intravascular optical coherence tomography (IV-OCT) artifacts that occur when imaging metallic stents: “merry-go-rounding” (MGR), which is an increase in strut arc length (SAL), and “blooming,” which is an increase in the strut reflection thickness (blooming thickness). Due to uncontrollable variables that occur in vivo, we performed an in vitro assessment of MGR and blooming in stented vessel phantoms. Using Xience V and Driver stents, we examined the effects of catheter offset, intimal strut coverage, and residual blood on SAL and blooming thickness in IV-OCT images. Catheter offset and strut coverage both caused minor MGR, while the greatest MGR effect resulted from light scattering by residual blood in the vessel lumen, with 1% hematocrit (Hct) causing a more than fourfold increase in SAL compared with saline (p<0.001). Residual blood also resulted in blooming, with blooming thickness more than doubling when imaged in 0.5% Hct compared with saline (p<0.001). We demonstrate that a previously undescribed mechanism, light scattering by residual blood in the imaging field, is the predominant cause of MGR. Light scattering also results in blooming, and a newly described artifact, three-dimensional-MGR, which results in “ghost struts” in B-scans. PMID:25545341

Temporally dependent pollinator competition and facilitation with mass flowering crops affects yield in co-blooming crops

PubMed Central

Grab, Heather; Blitzer, Eleanor J.; Danforth, Bryan; Loeb, Greg; Poveda, Katja

2017-01-01

One of the greatest challenges in sustainable agricultural production is managing ecosystem services, such as pollination, in ways that maximize crop yields. Most efforts to increase services by wild pollinators focus on management of natural habitats surrounding farms or non-crop habitats within farms. However, mass flowering crops create resource pulses that may be important determinants of pollinator dynamics. Mass bloom attracts pollinators and it is unclear how this affects the pollination and yields of other co-blooming crops. We investigated the effects of mass flowering apple on the pollinator community and yield of co-blooming strawberry on farms spanning a gradient in cover of apple orchards in the landscape. The effect of mass flowering apple on strawberry was dependent on the stage of apple bloom. During early and peak apple bloom, pollinator abundance and yield were reduced in landscapes with high cover of apple orchards. Following peak apple bloom, pollinator abundance was greater on farms with high apple cover and corresponded with increased yields on these farms. Spatial and temporal overlap between mass flowering and co-blooming crops alters the strength and direction of these dynamics and suggests that yields can be optimized by designing agricultural systems that avoid competition while maximizing facilitation. PMID:28345653

Predicting Sargassum blooms in the Caribbean Sea from MODIS observations

NASA Astrophysics Data System (ADS)

Wang, Mengqiu; Hu, Chuanmin

2017-04-01

Recurrent and significant Sargassum beaching events in the Caribbean Sea (CS) have caused serious environmental and economic problems, calling for a long-term prediction capacity of Sargassum blooms. Here we present predictions based on a hindcast of 2000-2016 observations from Moderate Resolution Imaging Spectroradiometer (MODIS), which showed Sargassum abundance in the CS and the Central West Atlantic (CWA), as well as connectivity between the two regions with time lags. This information was used to derive bloom and nonbloom probability matrices for each 1° square in the CS for the months of May-August, predicted from bloom conditions in a hotspot region in the CWA in February. A suite of standard statistical measures were used to gauge the prediction accuracy, among which the user's accuracy and kappa statistics showed high fidelity of the probability maps in predicting both blooms and nonblooms in the eastern CS with several months of lead time, with overall accuracy often exceeding 80%. The bloom probability maps from this hindcast analysis will provide early warnings to better study Sargassum blooms and prepare for beaching events near the study region. This approach may also be extendable to many other regions around the world that face similar challenges and opportunities of macroalgal blooms and beaching events.

Development of Phaeocystis globosa blooms in the upwelling waters of the South Central coast of Viet Nam

NASA Astrophysics Data System (ADS)

Hai, Doan-Nhu; Lam, Nguyen-Ngoc; Dippner, Joachim W.

2010-11-01

Blooms of haptophyte algae in the south central coastal waters of Viet Nam often occur in association with upwelling phenomenon during the southwest (SW) monsoon. Depending on the magnitude of the blooms, damage to aquaculture farms may occur. Based on two years of data on biology, oceanography, and marine chemistry, the present study suggests a conceptual model of the growth of the haptophyte Phaeocystis globosa. At the beginning of the bloom, low temperature and abundant nutrient supply, especially nitrate from rain and upwelling, favour bloom development. Diatoms utilize available nitrate and phosphate; subsequently, higher ammonium concentration allows P. globosa to grow faster than the diatoms. At the end of the Phaeocystis bloom, free cells may become available as food for a heterotrophic dinoflagellate species, Noctiluca scintillans. During and after the phytoplankton bloom, remineralization by bacteria reduces dissolved oxygen to a very low concentration at depth, and favors growth of nitrate-reducing bacteria.A Lagrangian Harmful Algal Bloom (HAB) model, driven by a circulation model of the area, realistically simulates the transport of microalgae in surface waters during strong and weak SW monsoon periods, suggesting that it may be a good tool for early warning of HABs in Vietnamese coastal waters.

7 CFR 51.1356 - Pears grown from late blooms.

Code of Federal Regulations, 2012 CFR

2012-01-01

... STANDARDS) United States Standards for Pears for Canning Definitions § 51.1356 Pears grown from late blooms. Pears grown from late blooms. Such pears often have excessively long stems (commonly termed “rat tails...

7 CFR 51.1356 - Pears grown from late blooms.

Code of Federal Regulations, 2010 CFR

2010-01-01

... STANDARDS) United States Standards for Pears for Canning Definitions § 51.1356 Pears grown from late blooms. Pears grown from late blooms. Such pears often have excessively long stems (commonly termed “rat tails...

7 CFR 51.1356 - Pears grown from late blooms.

Code of Federal Regulations, 2011 CFR

2011-01-01

... STANDARDS) United States Standards for Pears for Canning Definitions § 51.1356 Pears grown from late blooms. Pears grown from late blooms. Such pears often have excessively long stems (commonly termed “rat tails...

Mitigating Toxic Planktonic Cyanobacterial Blooms in Aquatic Ecosystems Facing Increasing Anthropogenic and Climatic Pressures

PubMed Central

2018-01-01

Toxic planktonic cyanobacterial blooms are a pressing environmental and human health problem. Blooms are expanding globally and threatening sustainability of our aquatic resources. Anthropogenic nutrient enrichment and hydrological modifications, including water diversions and reservoir construction, are major drivers of bloom expansion. Climatic change, i.e., warming, more extreme rainfall events, and droughts, act synergistically with human drivers to exacerbate the problem. Bloom mitigation steps, which are the focus of this review, must consider these dynamic interactive factors in order to be successful in the short- and long-term. Furthermore, these steps must be applicable along the freshwater to marine continuum connecting streams, lakes, rivers, estuarine, and coastal waters. There is an array of physical, chemical, and biological approaches, including flushing, mixing, dredging, application of algaecides, precipitating phosphorus, and selective grazing, that may arrest and reduce bloom intensities in the short-term. However, to ensure long term, sustainable success, targeting reductions of both nitrogen and phosphorus inputs should accompany these approaches along the continuum. Lastly, these strategies should accommodate climatic variability and change, which will likely modulate and alter nutrient-bloom thresholds. PMID:29419777

Algicidal bacteria in the sea and their impact on algal blooms.

PubMed

Mayali, Xavier; Azam, Farooq

2004-01-01

Over the past two decades, many reports have revealed the existence of bacteria capable of killing phytoplankton. These algicidal bacteria sometimes increase in abundance concurrently with the decline of algal blooms, suggesting that they may affect algal bloom dynamics. Here, we synthesize the existing knowledge on algicidal bacteria interactions with marine eukaryotic microalgae. We discuss the effectiveness of the current methods to characterize the algicidal phenotype in an ecosystem context. We briefly consider the literature on the phylogenetic identification of algicidal bacteria, their interaction with their algal prey, the characterization of algicidal molecules, and the enumeration of algicidal bacteria during algal blooms. We conclude that, due to limitations of current methods, the evidence for algicidal bacteria causing algal bloom decline is circumstantial. New methods and an ecosystem approach are needed to test hypotheses on the impact of algicidal bacteria in algal bloom dynamics. This will require enlarging the scope of inquiry from its current focus on the potential utility of algicidal bacteria in the control of harmful algal blooms. We suggest conceptualizing bacterial algicidy within the general problem of bacterial regulation of algal community structure in the ocean.

Identification of genetically and oceanographically distinct blooms of jellyfish

PubMed Central

Lee, Patricia L. M.; Dawson, Michael N; Neill, Simon P.; Robins, Peter E.; Houghton, Jonathan D. R.; Doyle, Thomas K.; Hays, Graeme C.

2013-01-01

Reports of nuisance jellyfish blooms have increased worldwide during the last half-century, but the possible causes remain unclear. A persistent difficulty lies in identifying whether blooms occur owing to local or regional processes. This issue can be resolved, in part, by establishing the geographical scales of connectivity among locations, which may be addressed using genetic analyses and oceanographic modelling. We used landscape genetics and Lagrangian modelling of oceanographic dispersal to explore patterns of connectivity in the scyphozoan jellyfish Rhizostoma octopus, which occurs en masse at locations in the Irish Sea and northeastern Atlantic. We found significant genetic structure distinguishing three populations, with both consistencies and inconsistencies with prevailing physical oceanographic patterns. Our analyses identify locations where blooms occur in apparently geographically isolated populations, locations where blooms may be the source or result of migrants, and a location where blooms do not occur consistently and jellyfish are mostly immigrant. Our interdisciplinary approach thus provides a means to ascertain the geographical origins of jellyfish in outbreaks, which may have wide utility as increased international efforts investigate jellyfish blooms. PMID:23287405

Comparison of the efficacy of MODIS and MERIS data for detecting cyanobacterial blooms in the southern Caspian Sea.

PubMed

Moradi, Masoud

2014-10-15

Medium Resolution Imaging Spectrometer (MERIS) data, Moderate Resolution Imaging Spectroradiometer (MODIS) data, and hydro-biological measurements were used to detect two very severe blooms in the southern Caspian Sea in 2005 and 2010. The MERIS Cyanobacteria Index (CIMERIS) was more reliable for detecting cyanobacterial blooms. The CIMERIS and MODIS cyanobacteria indices (CIMODIS) were compared in an effort to find a reliable method for detecting future blooms, as MERIS data were not available after April 2012. The CIMODIS had a linear relationship with and similar spatial patterns to the CIMERIS. On the CIMODIS images, extremely high biomass cyanobacteria patches were masked. A comparison of classified in situ data with the CIMODIS and Floating Algal Index (FAI) from four images of a severe bloom event in 2005 showed that the FAI is a reliable index for bloom detection over extremely dense patches. The corrected CIMODIS, the MODIS FAI and in situ data are adequate tools for cyanobacterial bloom monitoring in the southern Caspian Sea. Copyright © 2014 Elsevier Ltd. All rights reserved.

Water-quality data from Upper Klamath and Agency Lakes, Oregon, 2009-10

USGS Publications Warehouse

Eldridge, D. Blake; Caldwell Eldridge, Sara L.; Schenk, Liam N.; Tanner, Dwight Q.; Wood, Tamara M.

2012-01-01

The U.S. Geological Survey Upper Klamath Lake water-quality monitoring program collected data from multiparameter continuous water-quality monitors, weekly water-quality samples, and meteorological stations during 2009 and 2010 from May through November each year. The results of these measurements and sample analyses, as well as quality-control data for the water-quality samples, are presented in this report for 14 sites on Upper Klamath Lake and 2 sites on Agency Lake. These 2 years of data demonstrate a contrast in the seasonal bloom of the dominant cyanobacterium, Aphanizomenon flos-aquae, that can be related to differences in the measured water quality and meteorological variables. Some of the significant findings from 2009 and 2010 are listed below. * Both 2009 and 2010 were characterized by two cyanobacteria blooms, but the blooms differed in timing and intensity. The first bloom in 2009 peaked in late June and at higher chlorophyll a concentrations at most sites than the first bloom in 2010, which peaked in mid-July. A major decline in the first 2009 bloom occurred in late July and was followed by a second bloom that peaked at most sites in mid-August and persisted through September. The decline of the weaker first bloom in 2010 occurred in early August and was followed by a more substantial second bloom that peaked between late August and early September at most sites. * Dissolved oxygen minima associated with bloom declines occurred approximately 2 weeks earlier in 2009 (mid-July) than in 2010 (early August). pH maxima associated with rapid bloom growth occurred in late June and again in mid-August in 2009 and in mid-July and late August in 2010. * In both years, the maxima for total phosphorus and total nitrogen concentrations coincided with the chlorophyll a maximum. The maxima for dissolved nutrient concentrations (orthophosphate, ammonia, and nitrite plus nitrate) coincided with the declines of the first blooms. * Total particulate carbon, total particulate nitrogen, and total particulate phosphorus concentrations were measured in 2009 only. The ratios of carbon to phosphorus and nitrogen to phosphorus in particulates were the highest of the entire season during the rapid growth phase of the first bloom and were the lowest of the season during the decline of the first bloom. These ratios increased with the onset of the second bloom in that year, but to a lesser degree. * Meteorological data show that 2009 was warmer (particularly in June and July), less windy, and more humid early in the season than 2010. The difference in water temperatures reflected the difference in air temperatures in that the lakes were warmer in 2009 than in 2010 starting in early May, when the sensors were deployed, through most of June. Water temperature peaked at a higher value in 2009, and there were more clear days in June 2009 than in June 2010.

2. EXTERIOR OF ENGINE ROOM, CONTAINING MESTACORLISS CROSSCOMPOUND ENGINE, FOR ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

2. EXTERIOR OF ENGINE ROOM, CONTAINING MESTA-CORLISS CROSS-COMPOUND ENGINE, FOR 40" BLOOMING MILL - Republic Iron & Steel Company, Youngstown Works, Blooming Mill & Blooming Mill Engines, North of Poland Avenue, Youngstown, Mahoning County, OH

1. EXTERIOR OF ENGINE ROOM, CONTAINING UNITEDTOD TWINTANDEM ENGINE, FOR ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. EXTERIOR OF ENGINE ROOM, CONTAINING UNITED-TOD TWIN-TANDEM ENGINE, FOR 40" BLOOMING MILL - Republic Iron & Steel Company, Youngstown Works, Blooming Mill & Blooming Mill Engines, North of Poland Avenue, Youngstown, Mahoning County, OH

Monitoring Cyanobacteria Bloom in Taihu Lake by High-Resolution Geostationary Satellite GF4

NASA Astrophysics Data System (ADS)

Liu, J.

2018-04-01

The high-resolution remote-sensing satellite, GF4 PMS, of China's geosynchronous earth orbit was successfully launched on December 29, 2015. Its high spatial resolution and high temporal resolution allow GF4 PMS to play a very important role in water environment monitoring, especially in the dynamic monitoring of lake and reservoir cyanobacteria blooms. As GF4 PMS has just been launched, there is still relatively little related research, and the practical application effect of GF4 PMS in the extraction of cyanobacteria blooms remains to be further tested. Therefore, in this study, the method and effect of GF4 PMS application in cyanobacteria bloom monitoring were studied in Taihu. It turned that GF4 PMS can be applied to the dynamic monitoring of the distribution of cyanobacteria blooms in Taihu, thereby finding the temporal and spatial variation of the distribution of cyanobacteria blooms.

A model for seasonal phytoplankton blooms.

PubMed

Huppert, Amit; Blasius, Bernd; Olinky, Ronen; Stone, Lewi

2005-10-07

We analyse a generic bottom-up nutrient phytoplankton model to help understand the dynamics of seasonally recurring algae blooms. The deterministic model displays a wide spectrum of dynamical behaviours, from simple cyclical blooms which trigger annually, to irregular chaotic blooms in which both the time between outbreaks and their magnitudes are erratic. Unusually, despite the persistent seasonal forcing, it is extremely difficult to generate blooms that are both annually recurring and also chaotic or irregular (i.e. in amplitude) even though this characterizes many real time-series. Instead the model has a tendency to 'skip' with outbreaks often being suppressed from 1 year to the next. This behaviour is studied in detail and we develop analytical expressions to describe the model's flow in phase space, yielding insights into the mechanism of the bloom recurrence. We also discuss how modifications to the equations through the inclusion of appropriate functional forms can generate more realistic dynamics.

The Costs of Respiratory Illnesses Arising from Florida Gulf Coast Karenia brevis Blooms

PubMed Central

Hoagland, Porter; Jin, Di; Polansky, Lara Y.; Kirkpatrick, Barbara; Kirkpatrick, Gary; Fleming, Lora E.; Reich, Andrew; Watkins, Sharon M.; Ullmann, Steven G.; Backer, Lorraine C.

2009-01-01

Background Algal blooms of Karenia brevis, a harmful marine algae, occur almost annually off the west coast of Florida. At high concentrations, K. brevis blooms can cause harm through the release of potent toxins, known as brevetoxins, to the atmosphere. Epidemiologic studies suggest that aerosolized brevetoxins are linked to respiratory illnesses in humans. Objectives We hypothesized a relationship between K. brevis blooms and respiratory illness visits to hospital emergency departments (EDs) while controlling for environmental factors, disease, and tourism. We sought to use this relationship to estimate the costs of illness associated with aerosolized brevetoxins. Methods We developed a statistical exposure–response model to express hypotheses about the relationship between respiratory illnesses and bloom events. We estimated the model with data on ED visits, K. brevis cell densities, and measures of pollen, pollutants, respiratory disease, and intra-annual population changes. Results We found that lagged K. brevis cell counts, low air temperatures, influenza outbreaks, high pollen counts, and tourist visits helped explain the number of respiratory-specific ED diagnoses. The capitalized estimated marginal costs of illness for ED respiratory illnesses associated with K. brevis blooms in Sarasota County, Florida, alone ranged from $0.5 to $4 million, depending on bloom severity. Conclusions Blooms of K. brevis lead to significant economic impacts. The costs of illness of ED visits are a conservative estimate of the total economic impacts. It will become increasingly necessary to understand the scale of the economic losses associated with K. brevis blooms to make rational choices about appropriate mitigation. PMID:19672403

DOE Office of Scientific and Technical Information (OSTI.GOV)

Herfort, Lydie; Peterson, Tawnya D.; McCue, Lee Ann

For at least a decade, annually recurring blooms of the photosynthetic ciliate, Myrionecta rubra have been observed in the Columbia River estuary in late summer. In an effort to understand the dynamics of these blooms, we investigated the genetic variability of M. rubra and its cryptophyte plastids within three large estuarine blooms formed in consecutive years (2007-2009), and conducted a broader spatial survey along the coasts of Oregon/Washington. Analysis of the ‘18S-28S’ sequences specific for Mesodiniidae uncovered at least 7 variants of M. rubra within the Columbia River coastal margin in spring and summer, but only one of these M.more » rubra variants was implicated in estuary bloom formation. Using a multigene approach, we show that the bloom-forming variant of M. rubra appears to harbor the same cryptophyte chloroplast in recurring blooms. Analyses of chloroplast 16S rRNA, cryptophyte RuBisCO and Photosystem II D2 genes together suggest that the plastid is derived from Teleaulax amphioxeia. Free-living cells of this species and of other cryptophytes were practically absent from the bloom patches in the estuary main channels based on 18S rDNA sequence analyses. The respectively low and high proportions of T. amphioxeia nuclei and chloroplasts signals found in the M. rubra bloom of the Columbia River estuary in successive years supports the notion of a transient association between T. amphioxeia and the bloom-forming M. rubra variant, with loss of cryptophyte nuclei. The genetic variability of M. rubra uncovered here is relevant to the controversy in the literature regarding the cryptophyte /M. rubra association.« less

The impacts of a massive harmful algal bloom along the US west coast in 2015

NASA Astrophysics Data System (ADS)

Kudela, R. M.; Trainer, V. L.; McCabe, R. M.; Hickey, B. M.; Negrey, K.

2016-02-01

In 2015, a massive bloom of the marine diatom Pseudo-nitzschia, stretching from southern California to southern Alaska, resulted in significant impacts to coastal resources and marine life. This bloom was first detected in early May 2015, when Washington closed its scheduled razor clam digs on coastal beaches. It is the largest and longest-lasting bloom in at least the past 15 years, and concentrations of domoic acid in seawater, some forage fish, and crab samples have been among the highest ever reported for this region. By mid-May, domoic acid concentrations in Monterey Bay, California were 10 to 30 times the level that would be considered high for a normal Pseudo-nitzschia bloom. Impacts to coastal communities and marine life include shellfish and Dungeness crab closures in multiple states, impacting commercial, recreational and subsistence harvesters, anchovy and sardine fishery health advisories in some areas of California, and sea lion strandings in California and Washington. Other marine mammal and bird mortalities have been reported in multiple states, and domoic acid poisoning is a suspected cause. In addition to the spatial extent and toxicity, the bloom has also lasted for many months (ongoing as of September 2015). While the exact causes of the bloom's severity and early onset are not yet known, unusually warm surface water in the Pacific Ocean may be a contributing factor. Here we present an overview of the bloom dynamics and impacts, and preliminary analysis about the bloom initiation and relationship to unusual ocean conditions in 2014-2015.

Bloom termination of the toxic dinoflagellate Alexandrium catenella: Vertical migration behavior, sediment infiltration, and benthic cyst yield.

PubMed

Brosnahan, Michael L; Ralston, David K; Fischer, Alexis D; Solow, Andrew R; Anderson, Donald M

2017-11-01

New resting cyst production is crucial for the survival of many microbial eukaryotes including phytoplankton that cause harmful algal blooms. Production in situ has previously been estimated through sediment trap deployments, but here was instead assessed through estimation of the total number of planktonic cells and new resting cysts produced by a localized, inshore bloom of Alexandrium catenella , a dinoflagellate that is a globally important cause of paralytic shellfish poisoning. Our approach utilizes high frequency, automated water monitoring, weekly observation of new cyst production, and pre- and post-bloom spatial surveys of total resting cyst abundance. Through this approach, new cyst recruitment within the study area was shown to account for at least 10.9% ± 2.6% (SE) of the bloom's decline, ∼ 5× greater than reported from comparable, sediment trap based studies. The observed distribution and timing of new cyst recruitment indicate that: (1) planozygotes, the immediate precursor to cysts in the life cycle, migrate nearer to the water surface than other planktonic stages and (2) encystment occurs after planozygote settlement on bottom sediments. Near surface localization by planozygotes explains the ephemerality of red surface water discoloration by A. catenella blooms, and also enhances the dispersal of new cysts. Following settlement, bioturbation and perhaps active swimming promote sediment infiltration by planozygotes, reducing the extent of cyst redistribution between blooms. The concerted nature of bloom sexual induction, especially in the context of an observed upper limit to A. catenella bloom intensities and heightened susceptibility of planozygotes to the parasite Amoebophrya , is also discussed.

The Impact of Part-Time Faculty on Student Retention: A Case Study in Higher Education

ERIC Educational Resources Information Center

Smith, Curtis V.

2010-01-01

There has been considerable debate in community colleges over the last forty years regarding the impact of increased use of part-time faculty (PTF) on student learning. It has been argued that part-time faculty fail to provide the same level of teaching quality as full-time faculty (FTF). The purpose of this study was to determine the impact of…

An Ethical Basis for Autonomous System Deployment

DTIC Science & Technology

2009-09-24

Discussion on Robo -Ethics, Amsterdam, NL, March 2008.GSU Neurophilosophy 20. Brown Bag Lunch Series, "Governing Lethal Behavior: Embedding Ethics in an...5. Implementation of responsibility advisor : An ethical permission responsibility advisor was prototyped and demonstrated in a manner fully...PTF_Interface_Final_Largev3.mpg • Demonstration of the Ethical Responsibility Advisor : http://www.cc.gatech.edu/ai/robot-lab/ethics/res-advisor.mpg

PEP Support Laboratory Leaching and Permeate Stability Tests

DOE Office of Scientific and Technical Information (OSTI.GOV)

Russell, Renee L.; Peterson, Reid A.; Rinehart, Donald E.

2009-09-25

Pacific Northwest National Laboratory (PNNL) has been tasked by Bechtel National Inc. (BNI) on the River Protection Project-Hanford Tank Waste Treatment and Immobilization Plant (RPP-WTP) project to perform research and development activities to resolve technical issues identified for the Pretreatment Facility (PTF). The Pretreatment Engineering Platform (PEP) was designed, constructed, and operated as part of a plan to respond to issue M12, "Undemonstrated Leaching Processes," of the External Flowsheet Review Team (EFRT) issue response plan.( ) The PEP is a 1/4.5-scale test platform designed to simulate the WTP pretreatment caustic leaching, oxidative leaching, ultrafiltration solids concentration, and slurry washing processes.more » The PEP replicates the WTP leaching processes using prototypic equipment and control strategies. A simplified flow diagram of the PEP system is shown in Figure 1.1. Two operating scenarios are currently being evaluated for the ultrafiltration process (UFP) and leaching operations. The first scenario has caustic leaching performed in the UFP-2 ultrafiltration feed vessels (i.e., vessel UFP-VSL-T02A in the PEP and vessels UFP-VSL-00002A and B in the WTP PTF). The second scenario has caustic leaching conducted in the UFP-1 ultrafiltration feed preparation vessels (i.e., vessels UFP-VSL-T01A and B in the PEP and vessels UFP-VSL-00001A and B in the WTP PTF). In both scenarios, 19-M sodium hydroxide solution (NaOH, caustic) is added to the waste slurry in the vessels to leach solid aluminum compounds (e.g., gibbsite, boehmite). Caustic addition is followed by a heating step that uses direct injection of steam to accelerate the leach process. Following the caustic leach, the vessel contents are cooled using vessel cooling jackets and/or external heat exchangers. The main difference between the two scenarios is that for leaching in UFP-VSL-T01A and B, the 19-M NaOH is added to un-concentrated waste slurry (3 to 8 wt% solids), while for leaching in UFP-VSL-T02A, the slurry is concentrated to nominally 20 wt% solids using cross-flow ultrafiltration before adding caustic.« less

The Palomar Transient Factory Orion Project: Eclipsing Binaries and Young Stellar Objects

NASA Astrophysics Data System (ADS)

van Eyken, Julian C.; Ciardi, David R.; Rebull, Luisa M.; Stauffer, John R.; Akeson, Rachel L.; Beichman, Charles A.; Boden, Andrew F.; von Braun, Kaspar; Gelino, Dawn M.; Hoard, D. W.; Howell, Steve B.; Kane, Stephen R.; Plavchan, Peter; Ramírez, Solange V.; Bloom, Joshua S.; Cenko, S. Bradley; Kasliwal, Mansi M.; Kulkarni, Shrinivas R.; Law, Nicholas M.; Nugent, Peter E.; Ofek, Eran O.; Poznanski, Dovi; Quimby, Robert M.; Grillmair, Carl J.; Laher, Russ; Levitan, David; Mattingly, Sean; Surace, Jason A.

2011-08-01

The Palomar Transient Factory (PTF) Orion project is one of the experiments within the broader PTF survey, a systematic automated exploration of the sky for optical transients. Taking advantage of the wide (3fdg5 × 2fdg3) field of view available using the PTF camera installed at the Palomar 48 inch telescope, 40 nights were dedicated in 2009 December to 2010 January to perform continuous high-cadence differential photometry on a single field containing the young (7-10 Myr) 25 Ori association. Little is known empirically about the formation of planets at these young ages, and the primary motivation for the project is to search for planets around young stars in this region. The unique data set also provides for much ancillary science. In this first paper, we describe the survey and the data reduction pipeline, and present some initial results from an inspection of the most clearly varying stars relating to two of the ancillary science objectives: detection of eclipsing binaries and young stellar objects. We find 82 new eclipsing binary systems, 9 of which are good candidate 25 Ori or Orion OB1a association members. Of these, two are potential young W UMa type systems. We report on the possible low-mass (M-dwarf primary) eclipsing systems in the sample, which include six of the candidate young systems. Forty-five of the binary systems are close (mainly contact) systems, and one of these shows an orbital period among the shortest known for W UMa binaries, at 0.2156509 ± 0.0000071 days, with flat-bottomed primary eclipses, and a derived distance that appears consistent with membership in the general Orion association. One of the candidate young systems presents an unusual light curve, perhaps representing a semi-detached binary system with an inflated low-mass primary or a star with a warped disk, and may represent an additional young Orion member. Finally, we identify 14 probable new classical T-Tauri stars in our data, along with one previously known (CVSO 35) and one previously reported as a candidate weak-line T-Tauri star (SDSS J052700.12+010136.8).

EVIDENCE FOR AN FU ORIONIS-LIKE OUTBURST FROM A CLASSICAL T TAURI STAR

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Adam A.; Poznanski, Dovi; Silverman, Jeffrey M.

2011-04-01

We present pre- and post-outburst observations of the new FU Orionis-like young stellar object PTF 10qpf (also known as LkH{alpha} 188-G4 and HBC 722). Prior to this outburst, LkH{alpha} 188-G4 was classified as a classical T Tauri star (CTTS) on the basis of its optical emission-line spectrum superposed on a K8-type photosphere and its photometric variability. The mid-infrared spectral index of LkH{alpha} 188-G4 indicates a Class II-type object. LkH{alpha} 188-G4 exhibited a steady rise by {approx}1 mag over {approx}11 months starting in August 2009, before a subsequent more abrupt rise of >3 mag on a timescale of {approx}2 months. Observationsmore » taken during the eruption exhibit the defining characteristics of FU Orionis variables: (1) an increase in brightness by {approx}>4 mag, (2) a bright optical/near-infrared reflection nebula appeared, (3) optical spectra are consistent with a G supergiant and dominated by absorption lines, the only exception being H{alpha} which is characterized by a P Cygni profile, (4) near-infrared spectra resemble those of late K-M giants/supergiants with enhanced absorption seen in the molecular bands of CO and H{sub 2}O, and (5) outflow signatures in H and He are seen in the form of blueshifted absorption profiles. LkH{alpha} 188-G4 is the first member of the FU Orionis-like class with a well-sampled optical to mid-infrared spectral energy distribution in the pre-outburst phase. The association of the PTF 10qpf outburst with the previously identified CTTS LkH{alpha} 188-G4 (HBC 722) provides strong evidence that FU Orionis-like eruptions represent periods of enhanced disk accretion and outflow, likely triggered by instabilities in the disk. The early identification of PTF 10qpf as an FU Orionis-like variable will enable detailed photometric and spectroscopic observations during its post-outburst evolution for comparison with other known outbursting objects.« less

Bumpy light curves of interacting supernovae

NASA Astrophysics Data System (ADS)

Nyholm, Anders

2017-04-01

A supernova (SN) is the explosive destruction of a star. Via a luminous outpouring of radiation, the SN can rival the brightness of its SN host galaxy for months or years. In the past decade, astronomical surveys regularly observing the sky to deep limiting magnitudes have revealed that core collapse SNe (the demises of massive stars) are sometimes preceded by eruptive episodes by the progenitor stars during the years before the eventual SN explosion. Such SNe tend to show strong signatures of interaction between the SN ejecta and the circumstellar medium (CSM) deposited by the star before the SN explosion, likely by mass-loss episodes like the ones we have started to observe regularly. The complex CSM resolved around certain giant stars in our own galaxy and the eruptions of giant stars like Eta Carinae in the 19th century can be seen in this context. As the SN ejecta of an interacting SN sweep up the CSM of the progenitor, radiation from this process offers observers opportunity to scan the late mass loss history of the progenitor. In this thesis, interacting SNe and eruptive mass loss of their progenitors is discussed. The SN iPTF13z (discovered by the intermediate Palomar Transient Factory, iPTF) is presented. This transient was followed with optical photometry and spectroscopy during 1000 days and displayed a light curve with several conspicuous re-brigthenings ("bumps"), likely arising from SN ejecta interacting with denser regions in the CSM. Around 200 days before discovery, in archival data we found a clear precursor outburst lasting ∼50 days. A well-observed (but not necessarily well understood) event like SN 2009ip, which showed both precursor outbursts and a light curve bump, makes an interesting comparison object. The embedding of the (possible) SN in a CSM makes it hard to tell if a destructive SN explosion actually happened. In this respect, iPTF13z is compared to e.g. SN 2009ip but also to long-lived interacting SNe like SN 1988Z. Some suggestions for future investigations are offered, to tie light curve bumps to precursor events and to clarify the question of core collapse in the ambiguous cases of some interacting SNe.

Impacts of the 2014 severe drought on the Microcystis bloom in San Francisco Estuary.

PubMed

Lehman, P W; Kurobe, T; Lesmeister, S; Baxa, D; Tung, A; Teh, S J

2017-03-01

The increased frequency and intensity of drought with climate change may cause an increase in the magnitude and toxicity of freshwater cyanobacteria harmful algal blooms (CHABs), including Microcystis blooms, in San Francisco Estuary, California. As the fourth driest year on record in San Francisco Estuary, the 2014 drought provided an opportunity to directly test the impact of severe drought on cyanobacteria blooms in SFE. A field sampling program was conducted between July and December 2014 to sample a suite of physical, chemical, and biological variables at 10 stations in the freshwater and brackish reaches of the estuary. The 2014 Microcystis bloom had the highest biomass and toxin concentration, earliest initiation, and the longest duration, since the blooms began in 1999. Median chlorophyll a concentration increased by 9 and 12 times over previous dry and wet years, respectively. Total microcystin concentration also exceeded that in previous dry and wet years by a factor of 11 and 65, respectively. Cell abundance determined by quantitative PCR indicated the bloom contained multiple potentially toxic cyanobacteria species, toxic Microcystis and relatively high total cyanobacteria abundance. The bloom was associated with extreme nutrient concentrations, including a 20-year high in soluble reactive phosphorus concentration and low to below detection levels of ammonium. Stable isotope analysis suggested the bloom varied with both inorganic and organic nutrient concentration, and used ammonium as the primary nitrogen source. Water temperature was a primary controlling factor for the bloom and was positively correlated with the increase in both total and toxic Microcystis abundance. In addition, the early initiation and persistence of warm water temperature coincided with the increased intensity and duration of the Microcystis bloom from the usual 3 to 4 months to 8 months. Long residence time was also a primary factor controlling the magnitude and persistence of the bloom, and was created by a 66% to 85% reduction in both the water inflow and diversion of water for agriculture during the summer. We concluded that severe drought conditions can lead to a significant increase in the abundance of Microcystis and other cyanobacteria, as well as their associated toxins. Copyright © 2017 The Authors. Published by Elsevier B.V. All rights reserved.

Monitoring of ocean surface algal blooms in coastal and oceanic waters around India.

PubMed

Tholkapiyan, Muniyandi; Shanmugam, Palanisamy; Suresh, T

2014-07-01

The National Aeronautics and Space Administration's (NASA) sensor MODIS-Aqua provides an important tool for reliable observations of the changing ocean surface algal bloom paradigms in coastal and oceanic waters around India. A time series of the MODIS-Aqua-derived OSABI (ocean surface algal bloom index) and its seasonal composite images report new information and comprehensive pictures of these blooms and their evolution stages in a wide variety of events occurred at different times of the years from 2003 to 2011, providing the first large area survey of such phenomena around India. For most of the years, the results show a strong seasonal pattern of surface algal blooms elucidated by certain physical and meteorological conditions. The extent of these blooms reaches a maximum in winter (November-February) and a minimum in summer (June-September), especially in the northern Arabian Sea. Their spatial distribution and retention period are also significantly increased in the recent years. The increased spatial distribution and intensity of these blooms in the northern Arabian Sea in winter are likely caused by enhanced cooling, increased convective mixing, favorable winds, and atmospheric deposition of the mineral aerosols (from surrounding deserts) of the post-southwest monsoon period. The southward Oman coastal current and southwestward winds become apparently responsible for their extension up to the central Arabian Sea. Strong upwelling along this coast further triggers their initiation and growth. Though there is a warming condition associated with increased sea surface height anomalies along the coasts of India and Sri Lanka in winter, surface algal bloom patches are still persistent along these coasts due to northeast monsoonal winds, enhanced precipitation, and subsequent nutrient enrichment in these areas. The occurrence of the surface algal blooms in the northern Bay of Bengal coincides with a region of the well-known Ganges-Brahmaputra Estuarine Frontal (GBEF) system, which increases supply of nutrients in addition to the land-derived inputs triggering surface algal blooms in this region. Low density (initiation stage) of such blooms observed in clear oceanic waters southeast and northeast of Sri Lanka may be caused by the vertical mixing processes (strong monsoonal winds) and the occurrence of Indian Ocean Dipole events. Findings based on the analyses of time series satellite data indicate that the new information on surface algal blooms will have important bearing on regional fisheries, ecosystem and environmental studies, and implications of climate change scenarios.

What causes the sporadic phytoplankton bloom southeast of Madagascar?

NASA Astrophysics Data System (ADS)

Uz, B. Mete

2007-09-01

A large, dendritic phytoplankton bloom develops in the austral summer of roughly every other year in the Indian Ocean southeast of Madagascar. It starts in February or March and dissipates by the end of April. It was observed in 1997, 1999, 2000, 2002, and 2004 and was absent in 1998, 2001, 2003, and 2005. A. Longhurst, who described it in 2001, suggested that the bloom is caused by the entrainment of nutrient-rich waters into a deepening mixed layer. At the time the bloom had been seen to fail only once, in 1998, and Longhurst attributed that to reduced entrainment due to low winds during the strong La Niña. Since reanalysis winds are not correlated with the occurrence/failure of the bloom, and since the bloom starts before sea surface temperature (SST) peaks and increased chlorophyll is found with high rather than low SST, entrainment is an unlikely cause. Argo float profiles from 2004 show the bloom within a shallow mixed layer over a very strong pycnocline. This indicates that the bloom is caused not by entrainment of nutrient-rich waters from below, but by another mechanism such as nitrogen fixation by diazotrophs that are retained within a shallow, well-lit layer, or nutrient fluxes due to vertically mobile plankton. This bloom is among the strongest features of interannual variability in the ocean color time series, second only to El Niño-Southern Oscillation (ENSO)-related variability in terms of both the area effected and magnitude of the anomaly. While the mechanisms with which biology responds to the physical changes associated with ENSO are well-known and rather obvious in the strong correlations with physical indicators such as sea surface height or temperature, the occurrence/failure of a strong Madagascar bloom does not have an obvious correlation with any physical parameter. Of the many variables tested, only the landfall of tropical cyclones on the island of Madagascar correlated with the occurrence of the bloom. A hypothesis is presented, without any proof other than that it explains the location, seasonal timing, interannual variability, and observations of temperature and mixed layer depth, on the basis of the premise that runoff from the island alleviates iron limitation of diazotrophs. Definitive determination of the nature of the bloom will probably require in situ sampling.

A major seasonal phytoplankton bloom in the Madagascar Basin

NASA Astrophysics Data System (ADS)

Longhurst, Alan

2001-11-01

A hitherto-unnoticed phytoplankton bloom, of dimension 3000×1500 km, occupies the Madagascar Basin in late austral summer, being a prominent feature in SeaWiFS images. A first-order interpretation of the bloom mechanism invokes the seasonal deepening of the mixed layer within a strong mesoscale eddy-field and the consequent entrainment of nutrients into the photic zone. Features of the bloom correspond closely and appropriately with features of the eddy-field as observed by TOPEX-POSEIDON sea level anomalies. The bloom failed to develop in 1998, the second year of a two-year ENSO episode, when anomalously weak Southeast Trades will have failed to deepen the mixed layer as in other years.

Cyanotoxin mixtures and taste-and-odor compounds in cyanobacterial blooms from the midwestern united states

USGS Publications Warehouse

Graham, J.L.; Loftin, K.A.; Meyer, M.T.; Ziegler, A.C.

2010-01-01

The mixtures of toxins and taste-and-odor compounds present during cyanobacterial blooms are not well characterized and of particular concern when evaluating potential human health risks. Cyanobacterial blooms were sampled in twenty-three Midwestern United States lakes and analyzed for community composition, thirteen cyanotoxins by liquid chromatography/mass spectrometry and immunoassay, and two taste-and-odor compounds by gas chromatography/mass spectrometry. Aphanizomenon, Cylindrospermopsis and/or Microcystis were dominant in most (96%) blooms, but community composition was not strongly correlated with toxin and taste-and-odor occurrence. Microcystins occurred in all blooms. Total microcystin concentrations measured by liquid chromatography/mass spectrometry and immunoassay were linearly related (rs = 0.76, p < 0.01) and LC/MS/MS concentrations were lower than or similar to ELISA in most (85%) samples. Geosmin (87%), 2-methylisoborneol (39%), anatoxin-a (30%), saxitoxins (17%), cylindrospermopsins (9%), and nodularin-R (9%) also were present in these blooms. Multiple classes of cyanotoxins occurred in 48% of blooms and 95% had multiple microcystin variants. Toxins and taste-and-odor compounds frequently co-occurred (91% of blooms), indicating odor may serve as a warning that cyanotoxins likely are present. However, toxins occurred more frequently than taste-and-odor compounds, so odor alone does not provide sufficient warning to ensure human-health protection. ?? This article not subject to U.S. Copyright. Published 2010 by the American Chemical Society.

Blooming Artifact Reduction in Coronary Artery Calcification by A New De-blooming Algorithm: Initial Study.

PubMed

Li, Ping; Xu, Lei; Yang, Lin; Wang, Rui; Hsieh, Jiang; Sun, Zhonghua; Fan, Zhanming; Leipsic, Jonathon A

2018-05-02

The aim of this study was to investigate the use of de-blooming algorithm in coronary CT angiography (CCTA) for optimal evaluation of calcified plaques. Calcified plaques were simulated on a coronary vessel phantom and a cardiac motion phantom. Two convolution kernels, standard (STND) and high-definition standard (HD STND), were used for imaging reconstruction. A dedicated de-blooming algorithm was used for imaging processing. We found a smaller bias towards measurement of stenosis using the de-blooming algorithm (STND: bias 24.6% vs 15.0%, range 10.2% to 39.0% vs 4.0% to 25.9%; HD STND: bias 17.9% vs 11.0%, range 8.9% to 30.6% vs 0.5% to 21.5%). With use of de-blooming algorithm, specificity for diagnosing significant stenosis increased from 45.8% to 75.0% (STND), from 62.5% to 83.3% (HD STND); while positive predictive value (PPV) increased from 69.8% to 83.3% (STND), from 76.9% to 88.2% (HD STND). In the patient group, reduction in calcification volume was 48.1 ± 10.3%, reduction in coronary diameter stenosis over calcified plaque was 52.4 ± 24.2%. Our results suggest that the novel de-blooming algorithm could effectively decrease the blooming artifacts caused by coronary calcified plaques, and consequently improve diagnostic accuracy of CCTA in assessing coronary stenosis.

Physical control of interannual variations of the winter chlorophyll bloom in the northern Arabian Sea

NASA Astrophysics Data System (ADS)

Girijakumari Keerthi, Madhavan; Lengaigne, Matthieu; Levy, Marina; Vialard, Jerome; Parvathi, Vallivattathillam; de Boyer Montégut, Clément; Ethé, Christian; Aumont, Olivier; Suresh, Iyyappan; Parambil Akhil, Valiya; Moolayil Muraleedharan, Pillathu

2017-08-01

The northern Arabian Sea hosts a winter chlorophyll bloom, triggered by convective overturning in response to cold and dry northeasterly monsoon winds. Previous studies of interannual variations of this bloom only relied on a couple of years of data and reached no consensus on the associated processes. The current study aims at identifying these processes using both ˜ 10 years of observations (including remotely sensed chlorophyll data and physical parameters derived from Argo data) and a 20-year-long coupled biophysical ocean model simulation. Despite discrepancies in the estimated bloom amplitude, the six different remotely sensed chlorophyll products analysed in this study display a good phase agreement at seasonal and interannual timescales. The model and observations both indicate that the interannual winter bloom fluctuations are strongly tied to interannual mixed layer depth anomalies ( ˜ 0.6 to 0.7 correlation), which are themselves controlled by the net heat flux at the air-sea interface. Our modelling results suggest that the mixed layer depth control of the bloom amplitude ensues from the modulation of nutrient entrainment into the euphotic layer. In contrast, the model and observations both display insignificant correlations between the bloom amplitude and thermocline depth, which precludes a control of the bloom amplitude by daily dilution down to the thermocline depth, as suggested in a previous study.

Regulation of gene expression by the BLM helicase correlates with the presence of G-quadruplex DNA motifs

PubMed Central

Nguyen, Giang Huong; Tang, Weiliang; Robles, Ana I.; Beyer, Richard P.; Gray, Lucas T.; Welsh, Judith A.; Schetter, Aaron J.; Kumamoto, Kensuke; Wang, Xin Wei; Hickson, Ian D.; Maizels, Nancy; Monnat, Raymond J.; Harris, Curtis C.

2014-01-01

Bloom syndrome is a rare autosomal recessive disorder characterized by genetic instability and cancer predisposition, and caused by mutations in the gene encoding the Bloom syndrome, RecQ helicase-like (BLM) protein. To determine whether altered gene expression might be responsible for pathological features of Bloom syndrome, we analyzed mRNA and microRNA (miRNA) expression in fibroblasts from individuals with Bloom syndrome and in BLM-depleted control fibroblasts. We identified mRNA and miRNA expression differences in Bloom syndrome patient and BLM-depleted cells. Differentially expressed mRNAs are connected with cell proliferation, survival, and molecular mechanisms of cancer, and differentially expressed miRNAs target genes involved in cancer and in immune function. These and additional altered functions or pathways may contribute to the proportional dwarfism, elevated cancer risk, immune dysfunction, and other features observed in Bloom syndrome individuals. BLM binds to G-quadruplex (G4) DNA, and G4 motifs were enriched at transcription start sites (TSS) and especially within first introns (false discovery rate ≤ 0.001) of differentially expressed mRNAs in Bloom syndrome compared with normal cells, suggesting that G-quadruplex structures formed at these motifs are physiologic targets for BLM. These results identify a network of mRNAs and miRNAs that may drive the pathogenesis of Bloom syndrome. PMID:24958861

Regulation of gene expression by the BLM helicase correlates with the presence of G-quadruplex DNA motifs.

PubMed

Nguyen, Giang Huong; Tang, Weiliang; Robles, Ana I; Beyer, Richard P; Gray, Lucas T; Welsh, Judith A; Schetter, Aaron J; Kumamoto, Kensuke; Wang, Xin Wei; Hickson, Ian D; Maizels, Nancy; Monnat, Raymond J; Harris, Curtis C

2014-07-08

Bloom syndrome is a rare autosomal recessive disorder characterized by genetic instability and cancer predisposition, and caused by mutations in the gene encoding the Bloom syndrome, RecQ helicase-like (BLM) protein. To determine whether altered gene expression might be responsible for pathological features of Bloom syndrome, we analyzed mRNA and microRNA (miRNA) expression in fibroblasts from individuals with Bloom syndrome and in BLM-depleted control fibroblasts. We identified mRNA and miRNA expression differences in Bloom syndrome patient and BLM-depleted cells. Differentially expressed mRNAs are connected with cell proliferation, survival, and molecular mechanisms of cancer, and differentially expressed miRNAs target genes involved in cancer and in immune function. These and additional altered functions or pathways may contribute to the proportional dwarfism, elevated cancer risk, immune dysfunction, and other features observed in Bloom syndrome individuals. BLM binds to G-quadruplex (G4) DNA, and G4 motifs were enriched at transcription start sites (TSS) and especially within first introns (false discovery rate ≤ 0.001) of differentially expressed mRNAs in Bloom syndrome compared with normal cells, suggesting that G-quadruplex structures formed at these motifs are physiologic targets for BLM. These results identify a network of mRNAs and miRNAs that may drive the pathogenesis of Bloom syndrome.

Responding to Harmful Algal Blooms in Wyoming and on Tribal Lands in EPA Region 8

EPA Pesticide Factsheets

The Harmful Algal Blooms – Special Sampling and Response Actions webpage contains information about Background on Harmful Algae in Surface Waters and What to Do if Your System Has Indicators of an Algal Bloom.

Human Health Effects Associated with Exposure to Toxic Cyanobacteria

EPA Science Inventory

Reports of toxic cyanobacteria blooms are increasing worldwide. Warming and eutrophic surface water systems support the development of blooms. We examine the evidence for adverse human health effects associated with exposure to toxic blooms in drinking water, recreational water a...

ECOSYSTEM EFFECTS OF CYANOBACTERIAL HARMFUL ALGAL BLOOMS

EPA Science Inventory

Harmful cyanobacterial blooms represent one of the most serious ecological stressors in lakes, rivers, estuaries and marine environments. When there are persistent or frequent blooms with high biomass of cyanobacterial cells, colonies or filaments in the water, a wide range of i...

Winter atmospheric circulation signature for the timing of the spring bloom of diatoms in the North Sea

NASA Astrophysics Data System (ADS)

Lohmann, Gerrit; Wiltshire, Karen

2015-04-01

Analysing long-term diatom data from the German Bight and observational climate data for the period 1962-2005, we found a close connection of the inter-annual variation of the timing of the spring bloom with the boreal winter atmospheric circulation. We examined the fact that high diatom counts of the spring bloom tended to occur later when the atmospheric circulation was characterized by winter blocking over Scandinavia. The associated pattern in the sea level pressure showed a pressure dipole with two centres located over the Azores and Norway and was tilted compared to the North Atlantic Oscillation. The bloom was earlier when the cyclonic circulation over Scandinavia allowed an increased inflow of Atlantic water into the North Sea which is associated with clearer, more marine water, and warmer conditions. The bloom was later when a more continental atmospheric flow from the east was detected. At Helgoland Roads, it seems that under turbid water conditions (= low light) zooplankton grazing can affect the timing of the phytoplankton bloom negatively. Warmer water temperatures will facilitate this. Under clear water conditions, light will be the main governing factor with regard to the timing of the spring bloom. These different water conditions are shown here to be mainly related to large-scale weather patterns. We found that the mean diatom bloom could be predicted from the sea level pressure one to three months in advance. Using historical pressure data, we derived a proxy for the timing of the spring bloom over the last centuries, showing an increased number of late (proxy-) blooms during the eighteenth century when the climate was considerably colder than today. We argue that these variations are important for the interpretation of inter-annual to centennial variations of biological processes. This is of particular interest when considering future scenarios, as well to considerations on past and future effects on the primary production and food webs.

BLOOM: BLoom filter based oblivious outsourced matchings.

PubMed

Ziegeldorf, Jan Henrik; Pennekamp, Jan; Hellmanns, David; Schwinger, Felix; Kunze, Ike; Henze, Martin; Hiller, Jens; Matzutt, Roman; Wehrle, Klaus

2017-07-26

Whole genome sequencing has become fast, accurate, and cheap, paving the way towards the large-scale collection and processing of human genome data. Unfortunately, this dawning genome era does not only promise tremendous advances in biomedical research but also causes unprecedented privacy risks for the many. Handling storage and processing of large genome datasets through cloud services greatly aggravates these concerns. Current research efforts thus investigate the use of strong cryptographic methods and protocols to implement privacy-preserving genomic computations. We propose FHE-BLOOM and PHE-BLOOM, two efficient approaches for genetic disease testing using homomorphically encrypted Bloom filters. Both approaches allow the data owner to securely outsource storage and computation to an untrusted cloud. FHE-BLOOM is fully secure in the semi-honest model while PHE-BLOOM slightly relaxes security guarantees in a trade-off for highly improved performance. We implement and evaluate both approaches on a large dataset of up to 50 patient genomes each with up to 1000000 variations (single nucleotide polymorphisms). For both implementations, overheads scale linearly in the number of patients and variations, while PHE-BLOOM is faster by at least three orders of magnitude. For example, testing disease susceptibility of 50 patients with 100000 variations requires only a total of 308.31 s (σ=8.73 s) with our first approach and a mere 0.07 s (σ=0.00 s) with the second. We additionally discuss security guarantees of both approaches and their limitations as well as possible extensions towards more complex query types, e.g., fuzzy or range queries. Both approaches handle practical problem sizes efficiently and are easily parallelized to scale with the elastic resources available in the cloud. The fully homomorphic scheme, FHE-BLOOM, realizes a comprehensive outsourcing to the cloud, while the partially homomorphic scheme, PHE-BLOOM, trades a slight relaxation of security guarantees against performance improvements by at least three orders of magnitude.

Tendencies in Coccolithophorid Blooms in Some Marine Environments of the Northern Hemisphere according to the Data of Satellite Observations in 1998-2013

NASA Astrophysics Data System (ADS)

Kondrik, D.; Pozdnyakov, D.; Pettersson, L.

2017-12-01

Based on the method developed for the delineation of E. huxleyi blooms, a new technique is achieved for (1) the automated detection of E. huxleyi blooms among coexisting massive blooms of microalgae species of other phytoplankton groups and (2) quantifying the boom surface of this type of coccolithophores. As a result, according to the data of the Climate Change Initiative Ocean Colour (OC CCI) for 1998-2013, we have obtained multiyear time series of variability in both the incidence of E. huxleyi bloom and its area in the North, Norwegian, Greenland, Barents, and Bering seas. It is found that E. huxleyi blooms propagate within the intra-annual cycle from the studied middle-latitude marine areas towards the northern areas of the Northern Atlantic Ocean (NAO) and the Arctic Ocean (AO) following the pathways of the main Gulfstream and its branches. It is also found that E. huxleyi blooms are formed annually, initially in the vicinity of the British Islands; then they successively emerge in the northward direction following the western coast of the Great Britain, turn over its northern extremity to reach, firstly, the North Sea (in May), the Norwegian Sea, and finally the Greenland Sea (in June). Then they burst out in the Barents Sea, where the typical period of blooming lasts until late August and, in some years, even to mid-September. We determine the patterns of maximal rates and duration of blooms for each of the seas studied in the Atlantic and Arctic Oceans. As for the Bering Sea, the temporal and spatial variability in the growth of E. huxleyi has an irregular pattern: after a period of remarkably high expression of this phenomenon in 1998-2001, there was an abrupt decrease in both the number and, especially, extent of bloom areas.

Why was the 2012 bloom so early? Using chilling and warming metrics to resolve interannual variability in the timing of Alexandrium fundyense bloom initiation

NASA Astrophysics Data System (ADS)

Fischer, A. D.; Anderson, D. M.; Moore, S.; Brosnahan, M.

2016-02-01

The Nauset Marsh System (NMS) on Cape Cod (MA, USA) has recurrent Alexandrium fundyense blooms that have caused nearly annual shellfishing closures due to paralytic shellfish poisoning. Blooms were observed over a multi-year period (2009-2015) to examine the effects of seasonal cooling and warming on the transition from resting cysts to vegetative cells in the plankton. The life cycle processes of cyst dormancy, germination, and vegetative cell growth are all uniquely sensitive to temperature, which can translate to changes in bloom initiation phenology. Bloom initiation (>100 cells/l-1) occurred as early as 14 February 2012, and as late as 15 April 2015. To quantitatively examine the mechanisms responsible for this two-month range, laboratory studies were performed. In experiments mimicking winter's onset, mature cysts were exposed to chilling temperatures (2-8°C), and at regular intervals the germination potential of cyst cohorts was evaluated. Next, in experiments mimicking a range of late-winter, early-spring temperatures, the time to germination was observed for cold-conditioned cysts. To account for the interannual temperature variability in the NMS and enable comparison to laboratory studies, we calculated growing degree-days and chilling-units, both metrics that tabulate accumulated temperature exposures. Here we pair laboratory studies with seven years of bloom data to present a conceptual model of three temperature-dependent phases of bloom initiation for A. fundyense: 1) Winter dormancy. As temperatures cool, cysts enter a state of dormancy during which germination is physiologically inhibited, until they experience a threshold of winter chilling. 2) Quiescence. Cysts are physiologically able to germinate, but require a specific amount of heat, oxygen, and light. 3) Growth. Germling cells transform to vegetative cells, which divide asexually as a function of heat to create the bloom. These results help to explain differences in bloom timing between years, and provide insights into potential responses of A. fundyense to climate change.

Effects of Microcystis on development of early life stage Japanese medaka (Oryzias latipes): Comparative toxicity of natural blooms, cultured Microcystis and microcystin-LR.

PubMed

Saraf, Spencer R; Frenkel, Amy; Harke, Matthew J; Jankowiak, Jennifer G; Gobler, Christopher J; McElroy, Anne E

2018-01-01

Freshwater cyanobacterial harmful algal blooms (CyanoHABs) caused by algae in the genus Microcystis have been increasing in frequency and severity in recent decades. Microcystis blooms threaten aquatic organisms through effects associated with the rapid increase of biomass and the production of the hepatotoxin microcystin (MC) by toxic strains. Among fish, effects of blooms are likely to be more severe for early life stages, and physiological impacts on this life stage could significantly impact recruitment and fish populations. This study explores the effects of Microcystis blooms on the development of fish using the model organism, the Japanese medaka (Oryzias latipes), under realistic exposure conditions. Medaka embryos were exposed to natural blooms collected from New York City (USA) lakes, lab cultures of Microcystis, and MC-LR solutions. Field collected samples were more toxic than lab cultures (even when compared at the same algal density or MC concentration), causing decreased survival, premature time to hatch, reduced body length, yolk sac edema, and decreased heart rate, while lab culture exposures only resulted in bradycardia. Heart rate was the most sensitive endpoint measured, being depressed in embryos exposed to both lab cultures and field collected blooms. Generalized linear model analysis indicated bradycardia was statistically associated with both cell densities of blooms and MC concentrations, while single factor analysis indicated that MC concentrations had a stronger correlation compared to cell densities. However, MC exposure could not fully explain the effects observed, as exposures to MC-LR solutions alone were not able to reduce heart rate as severely as algal exposures. Collectively, these experiments indicate that factors beyond exposure to MC or even isolated Microcystis strains influence heart rate of fish exposed to Microcystis blooms. Enhanced mortality, depressed heart rate, and abnormal development observed in response to environmentally realistic exposures of Microcystis blooms could affect success of fish at both individual or population levels. Copyright © 2017 Elsevier B.V. All rights reserved.

Rising CO2 Levels Will Intensify Phytoplankton Blooms in Eutrophic and Hypertrophic Lakes

PubMed Central

Verspagen, Jolanda M. H.; Van de Waal, Dedmer B.; Finke, Jan F.; Visser, Petra M.; Van Donk, Ellen; Huisman, Jef

2014-01-01

Harmful algal blooms threaten the water quality of many eutrophic and hypertrophic lakes and cause severe ecological and economic damage worldwide. Dense blooms often deplete the dissolved CO2 concentration and raise pH. Yet, quantitative prediction of the feedbacks between phytoplankton growth, CO2 drawdown and the inorganic carbon chemistry of aquatic ecosystems has received surprisingly little attention. Here, we develop a mathematical model to predict dynamic changes in dissolved inorganic carbon (DIC), pH and alkalinity during phytoplankton bloom development. We tested the model in chemostat experiments with the freshwater cyanobacterium Microcystis aeruginosa at different CO2 levels. The experiments showed that dense blooms sequestered large amounts of atmospheric CO2, not only by their own biomass production but also by inducing a high pH and alkalinity that enhanced the capacity for DIC storage in the system. We used the model to explore how phytoplankton blooms of eutrophic waters will respond to rising CO2 levels. The model predicts that (1) dense phytoplankton blooms in low- and moderately alkaline waters can deplete the dissolved CO2 concentration to limiting levels and raise the pH over a relatively wide range of atmospheric CO2 conditions, (2) rising atmospheric CO2 levels will enhance phytoplankton blooms in low- and moderately alkaline waters with high nutrient loads, and (3) above some threshold, rising atmospheric CO2 will alleviate phytoplankton blooms from carbon limitation, resulting in less intense CO2 depletion and a lesser increase in pH. Sensitivity analysis indicated that the model predictions were qualitatively robust. Quantitatively, the predictions were sensitive to variation in lake depth, DIC input and CO2 gas transfer across the air-water interface, but relatively robust to variation in the carbon uptake mechanisms of phytoplankton. In total, these findings warn that rising CO2 levels may result in a marked intensification of phytoplankton blooms in eutrophic and hypertrophic waters. PMID:25119996

A comprehensive insight into functional profiles of free-living microbial community responses to a toxic Akashiwo sanguinea bloom

NASA Astrophysics Data System (ADS)

Yang, Caiyun; Li, Yi; Zhou, Yanyan; Lei, Xueqian; Zheng, Wei; Tian, Yun; van Nostrand, Joy D.; He, Zhili; Wu, Liyou; Zhou, Jizhong; Zheng, Tianling

2016-10-01

Phytoplankton blooms are a worldwide problem and can greatly affect ecological processes in aquatic systems, but its impacts on the functional potential of microbial communities are limited. In this study, a high-throughput microarray-based technology (GeoChip) was used to profile the functional potential of free-living microbes from the Xiamen Sea Area in response to a 2011 Akashiwo sanguinea bloom. The bloom altered the overall community functional structure. Genes that were significantly (p < 0.05) increased during the bloom included carbon degradation genes and genes involved in nitrogen (N) and/or phosphorus (P) limitation stress. Such significantly changed genes were well explained by chosen environmental factors (COD, nitrite-N, nitrate-N, dissolved inorganic phosphorus, chlorophyll-a and algal density). Overall results suggested that this bloom might enhance the microbial converting of nitrate to N2 and ammonia nitrogen, decrease P removal from seawater, activate the glyoxylate cycle, and reduce infection activity of bacteriophage. This study presents new information on the relationship of algae to other microbes in aquatic systems, and provides new insights into our understanding of ecological impacts of phytoplankton blooms.

Spatiotemporal Changes of Cyanobacterial Bloom in Large Shallow Eutrophic Lake Taihu, China

PubMed Central

Qin, Boqiang; Yang, Guijun; Ma, Jianrong; Wu, Tingfeng; Li, Wei; Liu, Lizhen; Deng, Jianming; Zhou, Jian

2018-01-01

Lake Taihu is a large shallow eutrophic lake with frequent recurrence of cyanobacterial bloom which has high variable distribution in space and time. Based on the field observations and remote sensing monitoring of cyanobacterial bloom occurrence, in conjunction with laboratory controlled experiments of mixing effects on large colony formation and colonies upward moving velocity measurements, it is found that the small or moderate wind-induced disturbance would increase the colonies size and enable it more easily to overcome the mixing and float to water surface rapidly during post-disturbance. The proposed mechanism of wind induced mixing on cyanobacterial colony enlargement is associated with the presence of the extracellular polysaccharide (EPS) which increased the size and buoyancy of cyanobacteria colonies and promote the colonies aggregate at the water surface to form bloom. Both the vertical movement and horizontal migration of cyanobacterial colonies were controlled by the wind induced hydrodynamics. Because of the high variation of wind and current coupling with the large cyanobacterial colony formation make the bloom occurrence as highly mutable in space and time. This physical factor determining cyanobacterial bloom formation in the large shallow lake differ from the previously documented light-mediated bloom formation dynamics. PMID:29619011

Unexpected winter phytoplankton blooms in the North Atlantic subpolar gyre

NASA Astrophysics Data System (ADS)

Lacour, L.; Ardyna, M.; Stec, K. F.; Claustre, H.; Prieur, L.; Poteau, A.; D'Alcala, M. Ribera; Iudicone, D.

2017-11-01

In mid- and high-latitude oceans, winter surface cooling and strong winds drive turbulent mixing that carries phytoplankton to depths of several hundred metres, well below the sunlit layer. This downward mixing, in combination with low solar radiation, drastically limits phytoplankton growth during the winter, especially that of the diatoms and other species that are involved in seeding the spring bloom. Here we present observational evidence for widespread winter phytoplankton blooms in a large part of the North Atlantic subpolar gyre from autonomous profiling floats equipped with biogeochemical sensors. These blooms were triggered by intermittent restratification of the mixed layer when mixed-layer eddies led to a horizontal transport of lighter water over denser layers. Combining a bio-optical index with complementary chemotaxonomic and modelling approaches, we show that these restratification events increase phytoplankton residence time in the sunlight zone, resulting in greater light interception and the emergence of winter blooms. Restratification also caused a phytoplankton community shift from pico- and nanophytoplankton to phototrophic diatoms. We conclude that transient winter blooms can maintain active diatom populations throughout the winter months, directly seeding the spring bloom and potentially making a significant contribution to over-winter carbon export.

Algal toxins

USGS Publications Warehouse

Creekmore, Lynn H.

1999-01-01

Periodic blooms of algae, including true algae, dinoflagellates, and cyanobacteria or blue-green algae have been reported in marine and freshwater bodies throughout the world. Although many blooms are merely an aesthetic nuisance, some species of algae produce toxins that kill fish, shellfish, humans, livestock and wildlife. Pigmented blooms of toxinproducing marine algae are often referred to as “red tides” (Fig. 36.1). Proliferations of freshwater toxin-producing cyanobacteria are simply called “cyanobacterial blooms” or “toxic algal blooms.” Cyanobacterial blooms initially appear green and may later turn blue, sometimes forming a “scum” in the water (Fig. 36.2).Although algal blooms historically have been considered a natural phenomenon, the frequency of occurrence of harmful algae appears to have increased in recent years. Agricultural runoff and other pollutants of freshwater and marine wetlands and water bodies have resulted in increased nutrient loading of phosphorus and nitrogen, thus providing conditions favorable to the growth of potentially toxic algae. The detrimental impact of red tides and cyanobacterial blooms on wetland, shore, and pelagic species has long been suspected but not often been substantiated because information on the effects of these toxins in fish and wildlife species is lacking and diagnostic tools are limited.

Cyanobacteria, Toxins and Indicators: Field Monitoring,Treatment Facility Monitoring and Treatment Studies

EPA Science Inventory

This presentation is a compilation of harmful algal bloom (HAB) related field monitoring data from the 2015 bloom season, treatment plant monitoring data from the 2013 and 2014 bloom seasons, and bench-scale treatment study data from 2015.

Spatial and Temporal Dynamics of Cyanobacterial Blooms in Two Rhode Island Ponds.

EPA Science Inventory

Cyanobacteria are natural components of freshwater ecosystems. When conditions are favorable (e.g., high nutrient inputs), cyanobacteria can form dense blooms that have negative effects on human and animal health, ecosystem functioning, and aesthetics. When blooms occur they can ...

Spatial and Temporal Dynamics of Cyanobacterial Blooms in Two Rhode Island Ponds

EPA Science Inventory

Cyanobacteria are natural components of freshwater ecosystems. When conditions are favorable (e.g., high nutrient inputs), cyanobacteria can form dense blooms that have negative effects on human and animal health, ecosystem functioning, and aesthetics. When blooms occur they ca...

What Factors Explain Harmful Algal Blooms of Dinophysis Along the Texas Coast?

NASA Astrophysics Data System (ADS)

Replogle, L.; Henrichs, D.; Campbell, L.

2016-02-01

The toxic dinoflagellate Dinophysis ovum is one of the harmful algal species that bloom along the Texas coast. Blooms of D. ovum can be explained by several factors that work together to cause bloom initiation. This work utilized image counts collected by the Imaging FlowCytobot (IFCB) at Port Aransas, TX and modeled winds from the European Centre for Medium-range Weather Forecasts. Based on a previous study of another dinoflagellate species, it was hypothesized that winds will be highly correlated with harmful algal bloom (HAB) years versus non-HAB years for D. ovum. Weak northerly winds and downwelling along the coast will be associated with HAB years, while strong northerly or southerly winds will be associated with non-HAB years. In non-HAB years, wind-driven currents caused by upcoast or strongly flowing downcoast winds will result in northward or southward movement of D. ovum cells. In HAB years, weaker downcoast winds will allow for accumulation of D. ovum at the coast. Results showed that weak downcoast, along-shore winds occurred in the weeks preceding HAB events in 2008, 2010, 2011, 2012 and 2014, and likely contributed to the accumulation of Dinophysis cells along the Texas coast. When winds moved upcoast or strongly downcoast in the weeks preceding bloom months, Dinophysis blooms did not occur. Additional factors (e.g. sea surface temperature, surface-based runoff, El Niño Southern Oscillation, North Atlantic Oscillation and salinity) were analyzed to better define a favorable environment for bloom formation. Sea surface temperature and surface based runoff were significantly correlated with bloom occurrence, whereas El Niño Southern Oscillation and the North Atlantic Oscillation were not.

Dynamics of cyanobacterial bloom formation during short-term hydrodynamic fluctuation in a large shallow, eutrophic, and wind-exposed Lake Taihu, China.

PubMed

Wu, Tingfeng; Qin, Boqiang; Zhu, Guangwei; Luo, Liancong; Ding, Yanqing; Bian, Geya

2013-12-01

Short-term hydrodynamic fluctuations caused by extreme weather events are expected to increase worldwide because of global climate change, and such fluctuations can strongly influence cyanobacterial blooms. In this study, the cyanobacterial bloom disappearance and reappearance in Lake Taihu, China, in response to short-term hydrodynamic fluctuations, was investigated by field sampling, long-term ecological records, high-frequency sensors and MODIS satellite images. The horizontal drift caused by the dominant easterly wind during the phytoplankton growth season was mainly responsible for cyanobacterial biomass accumulation in the western and northern regions of the lake and subsequent bloom formation over relatively long time scales. The cyanobacterial bloom changed slowly under calm or gentle wind conditions. In contrast, the short-term bloom events within a day were mainly caused by entrainment and disentrainment of cyanobacterial colonies by wind-induced hydrodynamics. Observation of a westerly event in Lake Taihu revealed that when the 30 min mean wind speed (flow speed) exceeded the threshold value of 6 m/s (5.7 cm/s), cyanobacteria in colonies were entrained by the wind-induced hydrodynamics. Subsequently, the vertical migration of cyanobacterial colonies was controlled by hydrodynamics, resulting in thorough mixing of algal biomass throughout the water depth and the eventual disappearance of surface blooms. Moreover, the intense mixing can also increase the chance for forming larger and more cyanobacterial colonies, namely, aggregation. Subsequently, when the hydrodynamics became weak, the cyanobacterial colonies continuously float upward without effective buoyancy regulation, and cause cyanobacterial bloom explosive expansion after the westerly. Furthermore, the results of this study indicate that the strong wind happening frequently during April and October can be an important cause of the formation and expansion of cyanobacterial blooms in Lake Taihu.

Modeling pore corrosion in normally open gold- plated copper connectors.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Battaile, Corbett Chandler; Moffat, Harry K.; Sun, Amy Cha-Tien

2008-09-01

The goal of this study is to model the electrical response of gold plated copper electrical contacts exposed to a mixed flowing gas stream consisting of air containing 10 ppb H{sub 2}S at 30 C and a relative humidity of 70%. This environment accelerates the attack normally observed in a light industrial environment (essentially a simplified version of the Battelle Class 2 environment). Corrosion rates were quantified by measuring the corrosion site density, size distribution, and the macroscopic electrical resistance of the aged surface as a function of exposure time. A pore corrosion numerical model was used to predict bothmore » the growth of copper sulfide corrosion product which blooms through defects in the gold layer and the resulting electrical contact resistance of the aged surface. Assumptions about the distribution of defects in the noble metal plating and the mechanism for how corrosion blooms affect electrical contact resistance were needed to complete the numerical model. Comparisons are made to the experimentally observed number density of corrosion sites, the size distribution of corrosion product blooms, and the cumulative probability distribution of the electrical contact resistance. Experimentally, the bloom site density increases as a function of time, whereas the bloom size distribution remains relatively independent of time. These two effects are included in the numerical model by adding a corrosion initiation probability proportional to the surface area along with a probability for bloom-growth extinction proportional to the corrosion product bloom volume. The cumulative probability distribution of electrical resistance becomes skewed as exposure time increases. While the electrical contact resistance increases as a function of time for a fraction of the bloom population, the median value remains relatively unchanged. In order to model this behavior, the resistance calculated for large blooms has been weighted more heavily.« less

Are cyanobacterial blooms trophic dead ends?

PubMed

Perga, Marie-Elodie; Domaizon, Isabelle; Guillard, Jean; Hamelet, Valérie; Anneville, Orlane

2013-06-01

Cyanobacterial blooms induce significant costs that are expected to increase in the near future. Cyanobacterial resistance to zooplankton grazing is one factor thought to promote bloom events. Yet, numerous studies on zooplankton ability to graze upon cyanobacteria have been producing contradictory results and such a puzzle might arise from the lack of direct observations in situ. Our objective was to track, using fatty acid (FA) and fatty acid stable isotope analyses (FA-SIA), the fate of cyanobacterial organic matter in the food web of a lake subjected to summer blooms of Planktothrix rubescens. A metalimnetic bloom of P. rubescens occurred in Lake Bourget (France) during the study period (May-November 2009). The bloom was especially rich in α-linolenic acid, 18:3(n-3), but none of the considered zooplankton taxa exhibited spiking content in this particular FA. FA-SIA revealed, however, that over a quarter of 18:3(n-3) in small zooplankton (<500 μm) was provided by P. rubescens while large cladocerans (>500 μm) did not benefit from it. P. rubescens 18:3(n-3) could be tracked up to perch (Perca fluviatilis) young of the year (YOY) to which it contributed to ~15 % of total 18:3(n-3). Although transferred with a much lower efficiency than micro-algal organic matter, the P. rubescens bloom supported a significant share of the pelagic secondary production and did not constitute, sensu stricto, a 'trophic dead end'. The cyanobacterial bloom also provided perch YOY with components of high nutritional values at a season when these are critical for their recruitment. This cyanobacterial bloom might thus be regarded as a significant dietary bonus for juvenile fish.

The human health effects of Florida red tide (FRT) blooms: an expanded analysis.

PubMed

Hoagland, Porter; Jin, Di; Beet, Andrew; Kirkpatrick, Barbara; Reich, Andrew; Ullmann, Steve; Fleming, Lora E; Kirkpatrick, Gary

2014-07-01

Human respiratory and digestive illnesses can be caused by exposures to brevetoxins from blooms of the marine alga Karenia brevis, also known as Florida red tide (FRT). K. brevis requires macro-nutrients to grow; although the sources of these nutrients have not been resolved completely, they are thought to originate both naturally and anthropogenically. The latter sources comprise atmospheric depositions, industrial effluents, land runoffs, or submerged groundwater discharges. To date, there has been only limited research on the extent of human health risks and economic impacts due to FRT. We hypothesized that FRT blooms were associated with increases in the numbers of emergency room visits and hospital inpatient admissions for both respiratory and digestive illnesses. We sought to estimate these relationships and to calculate the costs of associated adverse health impacts. We developed environmental exposure-response models to test the effects of FRT blooms on human health, using data from diverse sources. We estimated the FRT bloom-associated illness costs, using extant data and parameters from the literature. When controlling for resident population, a proxy for tourism, and seasonal and annual effects, we found that increases in respiratory and digestive illnesses can be explained by FRT blooms. Specifically, FRT blooms were associated with human health and economic effects in older cohorts (≥55 years of age) in six southwest Florida counties. Annual costs of illness ranged from $60,000 to $700,000 annually, but these costs could exceed $1.0 million per year for severe, long-lasting FRT blooms, such as the one that occurred during 2005. Assuming that the average annual illness costs of FRT blooms persist into the future, using a discount rate of 3%, the capitalized costs of future illnesses would range between $2 and 24 million. Copyright © 2014 Elsevier Ltd. All rights reserved.

Eddy-driven stratification initiates North Atlantic spring phytoplankton blooms.

PubMed

Mahadevan, Amala; D'Asaro, Eric; Lee, Craig; Perry, Mary Jane

2012-07-06

Springtime phytoplankton blooms photosynthetically fix carbon and export it from the surface ocean at globally important rates. These blooms are triggered by increased light exposure of the phytoplankton due to both seasonal light increase and the development of a near-surface vertical density gradient (stratification) that inhibits vertical mixing of the phytoplankton. Classically and in current climate models, that stratification is ascribed to a springtime warming of the sea surface. Here, using observations from the subpolar North Atlantic and a three-dimensional biophysical model, we show that the initial stratification and resulting bloom are instead caused by eddy-driven slumping of the basin-scale north-south density gradient, resulting in a patchy bloom beginning 20 to 30 days earlier than would occur by warming.

Real-Time Event Detection for Monitoring Natural and Source ...

EPA Pesticide Factsheets

The use of event detection systems in finished drinking water systems is increasing in order to monitor water quality in both operational and security contexts. Recent incidents involving harmful algal blooms and chemical spills into watersheds have increased interest in monitoring source water quality prior to treatment. This work highlights the use of the CANARY event detection software in detecting suspected illicit events in an actively monitored watershed in South Carolina. CANARY is an open source event detection software that was developed by USEPA and Sandia National Laboratories. The software works with any type of sensor, utilizes multiple detection algorithms and approaches, and can incorporate operational information as needed. Monitoring has been underway for several years to detect events related to intentional or unintentional dumping of materials into the monitored watershed. This work evaluates the feasibility of using CANARY to enhance the detection of events in this watershed. This presentation will describe the real-time monitoring approach used in this watershed, the selection of CANARY configuration parameters that optimize detection for this watershed and monitoring application, and the performance of CANARY during the time frame analyzed. Further, this work will highlight how rainfall events impacted analysis, and the innovative application of CANARY taken in order to effectively detect the suspected illicit events. This presentation d

Bloom's Idiosyncratic History of the University.

ERIC Educational Resources Information Center

Lawler, Peter Augustine

1989-01-01

Analyzes "The Idiosyncratic History of the University," a chapter in Allan Bloom's "The Closing of the American Mind". Focuses on Bloom's history of the university as explained through Socrates' philosophy. Concentrates on the role of philosophers in society past and present. Discusses the Enlightenment, Existentialism,…

Human health effects associated with exposure to toxic Cyanobacteria – what is the evidence?

EPA Science Inventory

Reports of toxic cyanobacteria blooms are increasing worldwide, as warming water and eutrophic surface water systems support the development of blooms. As awareness of toxic cyanobacteria blooms increases, reports of associated human and animal illnesses have also increased, but ...

HEALTH AND ECOLOGICAL IMPACTS OF HARMFUL ALGAL BLOOMS: RISK ASSESSMENT NEEDS

EPA Science Inventory

The symposium session, Indicators for Effects and Predictions of Harmful Algal Blooms, explored the current state of indicators used to assess the human health and ecological risks caused by harmful algal blooms, and highlighted future needs and impediments that must be overcome...

The Cartesian Heritage of Bloom's Taxonomy

ERIC Educational Resources Information Center

Bertucio, Brett

2017-01-01

This essay seeks to contribute to the critical reception of "Bloom's Taxonomy of Educational Objectives" by tracing the Taxonomy's underlying philosophical assumptions. Identifying Bloom's work as consistent with the legacy of Cartesian thought, I argue that its hierarchy of behavioral objectives provides a framework for certainty and…

13. INTERIOR OF ENGINE ROOM, CONTAINING MESTACORLISS CROSSCOMPOUND ENGINE, FOR ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

13. INTERIOR OF ENGINE ROOM, CONTAINING MESTA-CORLISS CROSS-COMPOUND ENGINE, FOR 40" BLOOMING MILL. THIS VIEW HIGHLIGHTS THE CRANK AND 24' DIAMETER FLYWHEEL. - Republic Iron & Steel Company, Youngstown Works, Blooming Mill & Blooming Mill Engines, North of Poland Avenue, Youngstown, Mahoning County, OH

Monitoring Bloom Dynamics of a Common Coastal Bioluminescent Ctenophore

DTIC Science & Technology

2007-09-30

jellyfish blooms are not well understood, but are generally assumed to be a combination of physical and biological factors, with temperature and...bioluminescent jellyfish , especially of Mnemiopsis leidyi, are a common occurrence that appear to be on the rise. Evidence indicates that these blooms

Insights into toxic Prymnesium parvum blooms: the role of sugars and algal viruses.

PubMed

Wagstaff, Ben A; Hems, Edward S; Rejzek, Martin; Pratscher, Jennifer; Brooks, Elliot; Kuhaudomlarp, Sakonwan; O'Neill, Ellis C; Donaldson, Matthew I; Lane, Steven; Currie, John; Hindes, Andrew M; Malin, Gill; Murrell, J Colin; Field, Robert A

2018-04-17

Prymnesium parvum is a toxin-producing microalga that causes harmful algal blooms globally, which often result in large-scale fish kills that have severe ecological and economic implications. Although many toxins have previously been isolated from P. parvum , ambiguity still surrounds the responsible ichthyotoxins in P. parvum blooms and the biotic and abiotic factors that promote bloom toxicity. A major fish kill attributed to P. parvum occurred in Spring 2015 on the Norfolk Broads, a low-lying set of channels and lakes (Broads) found on the East of England. Here, we discuss how water samples taken during this bloom have led to diverse scientific advances ranging from toxin analysis to discovery of a new lytic virus of P. parvum , P. parvum DNA virus (PpDNAV-BW1). Taking recent literature into account, we propose key roles for sialic acids in this type of viral infection. Finally, we discuss recent practical detection and management strategies for controlling these devastating blooms. © 2018 The Author(s).

El Niño-related offshore phytoplankton bloom events around the Spratley Islands in the South China Sea

NASA Astrophysics Data System (ADS)

Isoguchi, Osamu; Kawamura, Hiroshi; Ku-Kassim, Ku-Yaacob

2005-11-01

Satellite chlorophyll-a (Chl-a) observations reveal offshore phytoplankton bloom events with high Chl-a (>1 mg m-3) spreading over 300 km off the coasts around the Spratley Islands in the South China Sea (SCS) during the spring of 1998. The bloom entails anomalous wind jet and sea surface temperature (SST) cooling, suggesting that the wind jet-induced mixing and/or offshore upwelling bring about the cooling and the bloom through the supply of nutrient-rich waters into the euphotic zone. The strong wind jet is orographically formed responding to shifts in wind direction over the eastern SCS. The wind shift is connected with the Philippine Sea anomalous anticyclone that is established during El Niño, indicating the El Niño-related offshore bloom. The long-term reanalysis winds over the eastern SCS demonstrates that wind jet formation and associated offshore cooling/bloom are expected to occur in most cases of the subsequent El Niño years.

The origin of the Ulva macroalgal blooms in the Yellow Sea in 2013.

PubMed

Zhang, Jianheng; Huo, Yuanzi; Wu, Hailong; Yu, Kefeng; Kim, Jang Kyun; Yarish, Charles; Qin, Yutao; Liu, Caicai; Xu, Ren; He, Peimin

2014-12-15

Green algal blooms have occurred in the Yellow Sea for seven consecutive years from 2007 to 2013. In this study, satellite image analysis and field shipboard observations indicated that the Ulva blooms in 2013 originated in the Rudong coast. The spatial distribution of Ulva microscopic propagules in the Southern Yellow Sea also supported that the blooms originated in the Rudong coast. In addition, multi-source satellite data were used to evaluate the biomass of green algae on the Pyropia aquaculture rafts. The results showed that approximately 2784 tons of Ulva prolifera were attached to the rafts and possessed the same internal transcribed spacer and 5S rDNA sequence as the dominant species in the 2013 blooms. We conclude that the significant biomass of Ulva species on the Pyropia rafts during the harvesting season in radial tidal sand ridges played an important role in the rapid development of blooms in the Yellow Sea. Copyright © 2014 Elsevier Ltd. All rights reserved.

Spatio-temporal variations in bloom of the red-tide dinoflagellate Karenia mikimotoi in Imari Bay, Japan, in 2014: Factors controlling horizontal and vertical distribution.

PubMed

Aoki, Kazuhiro; Kameda, Takahiko; Yamatogi, Toshifumi; Ishida, Naoya; Hirae, Sou; Kawaguchi, Mayumi; Syutou, Toshio

2017-11-15

A massive bloom of the dinoflagellate Karenia mikimotoi appeared in 2014 in Imari Bay, Japan. Bloom dynamics and hydrographical conditions were examined by field survey. The bloom initially developed in the eastern area of Imari Bay, subsequently after rainfall during the neap tides, cell density exceeded over 10,000cellsml. Vertical distribution of K. mikimotoi was primarily controlled by the light intensity and secondarily by the water quality during the daytime. Almost all cell-density maxima occurred in depths with weak daytime light intensities of <300μmolm -2 s -1 . In some cases of weak light intensity, cell-density maxima occurred in depths with favorable hydrodynamic conditions for the growth. Spatially classified areas were identified by cluster analysis using the growth rate calculated from seawater temperature and salinity. This study quantitatively evaluated the environmental factors of the eastern area, where the bloom initially occurred, during the development of the bloom. Copyright © 2017 Elsevier Ltd. All rights reserved.

Applications of satellite ocean color sensors for monitoring and predicting harmful algal blooms

USGS Publications Warehouse

Stumpf, Richard P.

2001-01-01

The new satellite ocean color sensors offer a means of detecting and monitoring algal blooms in the ocean and coastal zone. Beginning with SeaWiFS (Sea Wide Field-of-view Sensor) in September 1997, these sensors provide coverage every 1 to 2 days with 1-km pixel view at nadir. Atmospheric correction algorithms designed for the coastal zone combined with regional chlorophyll algorithms can provide good and reproducible estimates of chlorophyll, providing the means of monitoring various algal blooms. Harmful algal blooms (HABs) caused by Karenia brevis in the Gulf of Mexico are particularly amenable to remote observation. The Gulf of Mexico has relatively clear water and K. brevis, in bloom conditions, tends to produce a major portion of the phytoplankton biomass. A monitoring program has begun in the Gulf of Mexico that integrates field data from state monitoring programs with satellite imagery, providing an improved capability for the monitoring of K. brevis blooms.

Further Studies on the Physical and Biogeochemical Causes for Large Interannual Changes in the Patagonian Shelf Spring-Summer Phytoplankton Bloom Biomass

NASA Technical Reports Server (NTRS)

Signorini, Sergio R.; Garcia, Virginia M.T.; Piola, Alberto R.; Evangelista, Heitor; McClain, Charles R.; Garcia, Carlos A.E.; Mata, Mauricio M.

2009-01-01

A very strong and persistent phytoplankton bloom was observed by ocean color satellites during September - December 2003 along the northern Patagonian shelf. The 2003 bloom had the highest extent and chlorophyll a (Chl-a) concentrations of the entire Sea-viewing Wide Field-of-view Sensor (SeaWiFS) period (1997 to present). SeaWiFS-derived Chl-a exceeded 20 mg/cu m in November at the bloom center. The bloom was most extensive in December when it spanned more than 300 km across the shelf and nearly 900 km north-south (35degS to 43degS). The northward reach and the deep penetration on the shelf of the 2003 bloom were quite anomalous when compared with other years, which showed the bloom more confined to the Patagonian shelf break (PSB). The PSB bloom is a conspicuous austral spring-summer feature detected by ocean color satellites and its timing can be explained using the Sverdrup critical depth theory. Based on high-resolution numerical simulations, in situ and remote sensing data, we provide some suggestions for the probable mechanisms responsible for that large interannual change of biomass as seen by ocean color satellites. Potential sources of macro and micro (e.g., Fe) nutrients that sustain the high phytoplankton productivity of the Patagonian shelf waters are identified, and the most likely physical processes that maintain the nutrient balance in the region are discussed.

Beach-goer behavior during a retrospectively detected algal ...

EPA Pesticide Factsheets

Algal blooms occur among nutrient rich, warm surface waters and may adversely impact recreational beaches. During July – September 2003, a prospective study of beachgoers was conducted on weekends at a public beach on a Great Lake in the United States. We measured each beachgoer’s activity at the start and end of their beach visit and the environmental factors: water and air temperature, wind speed and wave height at the study site each day. At the time, there was no notification of algal blooms; we retrospectively evaluated the presence of algal blooms using MERIS data from the Envisat-1 satellite. A total of 2840 people participated in the study over 16 study days. The majority (55%) were female, and 751 (26%) were < 18 years of age. An algal bloom was detected retrospectively by remotely sensed satellite imagery during August 16 – 24. This peak bloom period (PB) included 4 study days. During PB study days, more study participants 226/742 (31%) reported body contact with the water compared to contact 531/2098 (25%) on non-peak days. During the 4 PB days, of the environmental factors, only mean water temperature was significantly different, 250 C vs. 230 C (p<0.05) from other days.These results suggest that beachgoer body contact with water was not deterred by the presence of an algal bloom, and that interventions to actively discourage water contact during a bloom are needed to reduce exposure to blooms. This is an abstract of a proposed presentation and

Proteomic Analysis of Hepatic Tissue of Cyprinus carpio L. Exposed to Cyanobacterial Blooms in Lake Taihu, China

PubMed Central

Jiang, Jinlin; Wang, Xiaorong; Shan, Zhengjun; Yang, Liuyan; Zhou, Junying; Bu, Yuanqin

2014-01-01

With the rapid development of industry and agriculture and associated pollution, the cyanobacterial blooms in Lake Taihu have become a major threat to aquatic wildlife and human health. In this study, the ecotoxicological effects of cyanobacterial blooms on cage-cultured carp (Cyprinus carpio L.) in Meiliang Bay of Lake Taihu were investigated. Microcystins (MCs), major cyanobacterial toxins, have been detected in carp cultured at different experimental sites of Meiliang Bay. We observed that the accumulation of MCs in carp was closely associated with several environmental factors, including temperature, pH value, and density of cyanobacterial blooms. The proteomic profile of carp liver exposed to cyanobacterial blooms was analyzed using two-dimensional difference in-gel electrophoresis (2D-DIGE) and mass spectrometry. The toxic effects of cyanobacterial blooms on carp liver were similar to changes caused by MCs. MCs were transported into liver cells and induced the excessive production of reactive oxygen species (ROS). MCs and ROS inhibited protein phosphatase and aldehyde dehydrogenase (ALDH), directly or indirectly resulting in oxidative stress and disruption of the cytoskeleton. These effects further interfered with metabolic pathways in the liver through the regulation of series of related proteins. The results of this study indicated that cyanobacterial blooms pose a major threat to aquatic wildlife in Meiliang Bay in Lake Taihu. These results provided evidence of the molecular mechanisms underlying liver damage in carp exposed to cyanobacterial blooms. PMID:24558380

HIGH BREVETOXIN CONCENTRATIONS IN GYMNODINIUM BREVE BLOOMS ALONG THE NORTHWEST FLORIDA COAST DURING 1999.

EPA Science Inventory

Blooms of the dinoflagellate Gymnodinium breve (i.e. red tides) produce brevetoxins (PbTx) that negatively impact the Gulf of Mexico ecosystem, human health, and local economics. Characterizing and predicting bloom events and their impacts requires knowledge of G. breve abundance...

The Evolution of Educational Objectives: Bloom's Taxonomy and beyond

ERIC Educational Resources Information Center

Fallahi, Carolyn R.; LaMonaca, Frank H., Jr.

2009-01-01

It is crucial for teachers to communicate effectively about educational objectives to students, colleagues, and others in education. In 1956, Bloom developed a cognitive learning taxonomy to enhance communication between college examiners. The Bloom taxonomy consists of 6 hierarchical levels of learning (knowledge, comprehension, application,…

The Cyanobacteria Assessment Network - Recent Success in Harmful Algal Bloom Detection

EPA Science Inventory

Cyanobacteria blooms, which can become harmful algal blooms (HABs), are a huge environmental problem across the United States. They are capable of producing dangerous toxins that threaten the health of humans and animals, quality of drinking water supplies, and the ecosystem in w...

Algal bloom-associated disease outbreaks among users of freshwater lakes-United States, 2009 - 2010

EPA Science Inventory

‘Algal blooms’ are local abundances of phytoplankton – microscopic photosynthesizing aquatic organisms found in surface waters worldwide; blooms are variable temporally and spatially and frequently produce a visible algal scum on the water. Harmful algal blooms (HABs) are abundan...

HIGH BREVETOXIN CONCENTRATIONS IN GYMNODINIUM BREVE BLOOMS ALONG THE NORTHWEST FLORIDA COAST DURING 1999

EPA Science Inventory

Blooms of the dinoflagellate Gymnodinium breve (i.e. red tides) produce brevetoxins (PbTx) that negatively impact the Gulf of Mexico ecosystem, human health, and local economics. Characterizing and predicting bloom events and their impacts requires knowledge of G. breve abundance...

VizieR Online Data Catalog: CNSS pilot survey (Mooley+, 2016)

NASA Astrophysics Data System (ADS)

Mooley, K. P.; Hallinan, G.; Bourke, S.; Horesh, A.; Myers, S. T.; Frail, D. A.; Kulkarni, S. R.; Levitan, D. B.; Kasliwal, M. M.; Cenko, S. B.; Cao, Y.; Bellm, E.; Laher, R. R.

2017-11-01

The radio observations were carried out across four epochs (E1-E4) with the Jansky VLA in B array configuration, and S band was chosen to maximize survey speed. The optical survey, designed to be contemporaneous with the radio survey, was carried out with the 1.2-m (48-inch) Samuel Oschin Telescope at the Palomar Observatory as part of the Palomar Transient Factory (PTF). (1 data file).

Research in Inorganic Fluorine Chemistry.

DTIC Science & Technology

1987-03-01

fluoride is bound to yield fluorine, the required reaction temperatures and conditions are so extreme that rapid reaction of the evolved fluorine with the... temperatures as low as -31 *C. indicating an ionic two-electra. oxidation mechanism. An unproved syntheisis of KtF’MF64 (M - As. Sb). Ramn data and...Fz. and PtF, at elevated temperature and praisurs. General aspects of the formaetion mechianisaw of coardinatively saturated complex fluoro cations

New generation of hydraulic pedotransfer functions for Europe

PubMed Central

Tóth, B; Weynants, M; Nemes, A; Makó, A; Bilas, G; Tóth, G

2015-01-01

A range of continental-scale soil datasets exists in Europe with different spatial representation and based on different principles. We developed comprehensive pedotransfer functions (PTFs) for applications principally on spatial datasets with continental coverage. The PTF development included the prediction of soil water retention at various matric potentials and prediction of parameters to characterize soil moisture retention and the hydraulic conductivity curve (MRC and HCC) of European soils. We developed PTFs with a hierarchical approach, determined by the input requirements. The PTFs were derived by using three statistical methods: (i) linear regression where there were quantitative input variables, (ii) a regression tree for qualitative, quantitative and mixed types of information and (iii) mean statistics of developer-defined soil groups (class PTF) when only qualitative input parameters were available. Data of the recently established European Hydropedological Data Inventory (EU-HYDI), which holds the most comprehensive geographical and thematic coverage of hydro-pedological data in Europe, were used to train and test the PTFs. The applied modelling techniques and the EU-HYDI allowed the development of hydraulic PTFs that are more reliable and applicable for a greater variety of input parameters than those previously available for Europe. Therefore the new set of PTFs offers tailored advanced tools for a wide range of applications in the continent. PMID:25866465

iPTF search for an optical counterpart to gravitational-wave transient GW150914

DOE PAGES

Kasliwal, M. M.; Cenko, S. B.; Singer, L. P.; ...

2016-06-16

The intermediate Palomar Transient Factory (iPTF) autonomously responded to and promptly tiled the error region of the first gravitational-wave event GW150914 to search for an optical counterpart. Only a small fraction of the total localized region was immediately visible in the northern night sky, due both to Sun-angle and elevation constraints. Here, we report on the transient candidates identified and rapid follow-up undertaken to determine the nature of each candidate. Even in the small area imaged of 126 deg 2, after extensive filtering, eight candidates were deemed worthy of additional follow-up. Within two hours, all eight were spectroscopically classified bymore » the Keck II telescope. Curiously, even though such events are rare, one of our candidates was a superluminous supernova. We obtained radio data with the Jansky Very Large Array and X-ray follow-up with the Swift satellite for this transient. None of our candidates appear to be associated with the gravitational-wave trigger, which is unsurprising given that GW150914 came from the merger of two stellar-mass black holes. In conclusion, this end-to-end discovery and follow-up campaign bodes well for future searches in this post-detection era of gravitational waves.« less

12. GENERAL VIEW OF UNITEDTOD TWINTANDEM STEAM ENGINE, AS SEEN ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

12. GENERAL VIEW OF UNITED-TOD TWIN-TANDEM STEAM ENGINE, AS SEEN FROM WALKWAY ALONG WALL, ON THE OTHER SIDE OF WHICH STOOD THE 40" BLOOMING MILL - Republic Iron & Steel Company, Youngstown Works, Blooming Mill & Blooming Mill Engines, North of Poland Avenue, Youngstown, Mahoning County, OH

Harmful algal bloom smart device application: using image analysis and machine learning techniques for early classification of harmful algal blooms

EPA Science Inventory

The Ecological Stewardship Institute at Northern Kentucky University and the U.S. Environmental Protection Agency are collaborating to optimize a harmful algal bloom detection algorithm that estimates the presence and count of cyanobacteria in freshwater systems by image analysis...

A New Bloom: Transforming Learning

ERIC Educational Resources Information Center

Cochran, David; Conklin, Jack

2007-01-01

This article discusses a new design for the classic Bloom's Taxonomy developed by Anderson, L. W. & Krathwohl, D. (2001), which can be used to evaluate learners' technology-enhanced experience in more powerful and critical ways. The New Bloom's Taxonomy incorporates contemporary research on learning and human cognition into its model. The…

TEXAS HARMFUL ALGAL BLOOM COORDINATION MX964014

EPA Science Inventory

Harmful algal blooms (HAB) are an expanding problem in coastal Texas. Nearly � of the known harmful algal blooms along the Texas coast have occurred in the past ten years and have led to significant resource and tourism losses. For example, there are at least two types of toxic...

A method for examining temporal changes in cyanobacterial harmful algal bloom spatial extent using satellite remote sensing..

EPA Science Inventory

Cyanobacterial harmful algal blooms (CyanoHAB) are thought to be increasing globally over the past few decades, but relatively little quantitative information is available about the spatial extent of blooms. Satellite remote sensing provides a potential technology for identifying...

MITIGATION OF HARMFUL ALGAL BLOOMS IN THE UNITED STATES USING CLAY: RESEARCH PROGRESS AND FUTURE PERSPECTIVES

EPA Science Inventory

Throughout the United States, red tides and harmful algal blooms (HABs) pose a serious and recurrent threat to marine ecosystems, fisheries, human health, and coastal aesthetics. Here we report results from a research program investigating the use of clay dispersal for bloom cont...

Toxin composition of the 2016 Microcystis aeruginosa bloom in the St. Lucie Estuary, Florida.

PubMed

Oehrle, Stuart; Rodriguez-Matos, Marliette; Cartamil, Michael; Zavala, Cristian; Rein, Kathleen S

2017-11-01

A bloom of the cyanobacteria, Microcystis aeruginosa occurred in the St. Lucie Estuary during the summer of 2016, stimulated by the release of waters from Lake Okeechobee. This cyanobacterium produces the microcystins, a suite of heptapeptide hepatotoxins. The toxin composition of the bloom was analyzed and was compared to an archived bloom sample from 2005. Microcystin-LR was the most abundant toxin with lesser amounts of microcystin variants. Nodularin, cylindrospermopsin and anatoxin-a were not detected. Copyright © 2017 Elsevier Ltd. All rights reserved.

Propagation of high-energy laser beams through the earth's atmosphere II; Proceedings of the Meeting, Los Angeles, CA, Jan. 21-23, 1991

NASA Technical Reports Server (NTRS)

Ulrich, Peter B. (Editor); Wilson, Leroy E. (Editor)

1991-01-01

Consideration is given to turbulence at the inner scale, modeling turbulent transport in laser beam propagation, variable wind direction effects on thermal blooming correction, realistic wind effects on turbulence and thermal blooming compensation, wide bandwidth spectral measurements of atmospheric tilt turbulence, remote alignment of adaptive optical systems with far-field optimization, focusing infrared laser beams on targets in space without using adaptive optics, and a simplex optimization method for adaptive optics system alignment. Consideration is also given to ground-to-space multiline propagation at 1.3 micron, a path integral approach to thermal blooming, functional reconstruction predictions of uplink whole beam Strehl ratios in the presence of thermal blooming, and stability analysis of semidiscrete schemes for thermal blooming computation.

A toxic cyanobacterial bloom in an urban coastal lake, Rio Grande do Sul state, Southern Brazil

PubMed Central

de Carvalho, Luciana Retz; Pipole, Fernando; Werner, Vera Regina; Laughinghouse IV, Haywood Dail; de Camargo, Antonio Carlos M.; Rangel, Marisa; Konno, Katsuhiro; Sant’ Anna, Célia Leite

2008-01-01

Reports of cyanobacterial blooms developing worldwide have considerably increased, and, in most cases, the predominant toxins are microcystins. The present study reports a cyanobacterial bloom in Lake Violão, Torres, Rio Grande do Sul State, in January 2005. Samples collected on January 13, 2005, were submitted to taxonomical, toxicological, and chemical studies. The taxonomical analysis showed many different species of cyanobacteria, and that Microcystis protocystis and Sphaerocavum cf. brasiliense were dominant. Besides these, Microcystis panniformis, Anabaena oumiana, Cylindrospermopsis raciborskii, and Anabaenopsis elenkinii f. circularis were also present. The toxicity of the bloom was confirmed through intraperitoneal tests in mice, and chemical analyses of bloom extracts showed that the major substance was anabaenopeptin F, followed by anabaenopeptin B, microcystin-LR, and microcystin-RR. PMID:24031304

Exploring the erodibility of sediments and harmful algal blooms in the Gulf of Maine

USGS Publications Warehouse

Butman, Bradford; Dickhudt, Patrick J.; Keafer, Bruce A.

2012-01-01

Investigators at the U.S. Geological Survey (USGS) are cooperating with scientists at Woods Hole Oceanographic Institution (WHOI) to investigate harmful algal blooms along the New England coast in the Gulf of Maine. These blooms are caused by cysts of the dinoflagellate Alexandrium fundyense that overwinter in the bottom sediments and germinate in spring. Depending on conditions such as temperature, light, nutrient levels, and currents, these single-celled organismscan create a bloom along the coast, called ‘red tides.’Shellfish that have ingested these cells in sufficient concentration can become toxic to humans and require that the shellfisheries be closed. After the spring bloom, the organisms form cysts that sink to the sea floor and are sequestered in the bottom sediments over the winter.

An overview of diversity, occurrence, genetics and toxin production of bloom-forming Dolichospermum (Anabaena) species.

PubMed

Li, Xiaochuang; Dreher, Theo W; Li, Renhui

2016-04-01

The new genus name Dolichospermum, for most of the planktonic former members of the genus Anabaena, is one of the most ubiquitous bloom-forming cyanobacterial genera. Its dominance and persistence have increased in recent years, due to eutrophication from anthropogenic activities and global climate change. Blooms of Dolichospermum species, with their production of secondary metabolites that commonly include toxins, present a worldwide threat to environmental and public health. In this review, recent advances of the genus Dolichospermum are summarized, including taxonomy, genetics, bloom occurrence, and production of toxin and taste-and-odor compounds. The recent and continuing acquisition of genome sequences is ushering in new methods for monitoring and understanding the factors regulating bloom dynamics. Copyright © 2015 Elsevier B.V. All rights reserved.

Spatiotemporal variations of inorganic nutrients along the Jiangsu coast, China, and the occurrence of macroalgal blooms (green tides) in the southern Yellow Sea.

PubMed

Li, Hongmei; Zhang, Yongyu; Tang, Hongjie; Shi, Xiaoyong; Rivkin, Richard B; Legendre, Louis

2017-03-01

Large macroalgal blooms (i.e. green tides of Ulva prolifera) occurred in the southern Yellow Sea, China, yearly from 2007 to 2016. They were among the largest of such outbreaks around the world, and these blooms likely originated along the coast of the Jiangsu Province, China. Understanding the roles of nutrients in the onset of these macroalgal blooms is needed to identify their origin. This study analyzes the spatiotemporal variations in dissolved inorganic nitrogen and phosphorus (DIN and PO 4 -P) and the N/P ratio along the Jiangsu coast from 1996 to 2014 during late-March to April, the months which corresponds to the pre-bloom period of green tides since 2007. A zone of high DIN and PO 4 -P concentrations has developed along the Jiangsu coast, between the cities of Sheyang and Nantong, since 1996. There was an 18-year trend of increasing DIN concentrations during the pre-bloom period as well as a positive correlation between the U. prolifera biomass and DIN concentrations. Nutrient inputs from rivers and mariculture in the Jiangsu Province may have provided nitrogen that contributed the magnitude of macroalgal blooms that subsequently spread into the southern Yellow Sea. Copyright © 2017 Elsevier B.V. All rights reserved.

The role of native flower visitors in pollinating Opuntia ficus-indica (L.) Mill., naturalized in Sicily

NASA Astrophysics Data System (ADS)

Lo Verde, Gabriella; La Mantia, Tommaso

2011-09-01

The role of insects in pollination and consequently in fruit set and quality was assessed in two commercial orchards of the cactus pear, Opuntia ficus-indica (L.) Mill., in Agrigento Province, Sicily. In 1997, insects visiting flowers were sampled during May-June (the first bloom) and July (the second bloom, induced by the "scozzolatura" practise). More than 50 insect species belonging to 10 orders were collected in May-June, while only five species of Hymenoptera Apoidea were collected in July. The quality of fruits arising from the second bloom showed that Hymenoptera alone were able to guarantee effective pollination. To verify the role of insects in pollination in 1996 (during only the second bloom), and in 1997 and 2009 (during both blooms), 60 single flowers were marked during each bloom; 30 of them covered with paper sleeves (which prevented natural pollination), while the others were not covered. After withering, fruits produced by marked flowers were analyzed in laboratory: in all years and blooms, the total number of seeds, the number of developed seeds, and the weight and the percentage of pulp were significantly lower for covered flowers than for non-covered flowers. The results are consistent with the hypothesis that native insects effectively carry out the pollination of cactus pear flowers.

Environmental characteristics of annual pico/nanophytoplankton blooms along the Qinhuangdao Coast

NASA Astrophysics Data System (ADS)

Cao, Xihua; Yu, Zhiming; Wu, Zaixing; Cheng, Fangjin; He, Liyan; Yuan, Yongquan; Song, Xiuxian; Zhang, Jianle; Zhang, Yongfeng; Zhang, Wanlei

2018-03-01

Blooms of some pico/nanophytoplankton have occurred frequently along the Qinhuangdao coast since 2009, and it is necessary to identify the critical environmental factors inducing them. In this study, variations in the physical and nutrient characteristics of the seawater were analyzed following the development of local blooms in 2013. The local environmental characteristics were also compared with those of the Changjiang River estuary, China, and the Long Island estuaries in the USA, which are also prone to blooms of special algal species. In Qinhuangdao the local water temperature varied seasonally and rose above 15°C in 2013 early summer, coincident with the water discoloration. The salinity was more than 28 with a variation range of <3 throughout the year. Our results suggest that the physical conditions of the Qinhuangdao coastal area were suitable for the explosive proliferation of certain pico/nanophytoplankton, e.g. Aureococcus anophagefferens. The water supporting the bloom was not in a condition of serious eutrophication, but there were relatively high concentrations of reduced nitrogen (especially ammonium), which acted as an important nitrogen source for the pico/nanophytoplankton bloom. There was also a large gap between total nitrogen (TN) and dissolved inorganic nitrogen (DIN). Although the phosphate concentration was relatively low, there was no evidence of phosphorus limitation to the growth of pico/nanophytoplankton during bloom events.

Molecular insights into a dinoflagellate bloom

PubMed Central

Gong, Weida; Browne, Jamie; Hall, Nathan; Schruth, David; Paerl, Hans; Marchetti, Adrian

2017-01-01

In coastal waters worldwide, an increase in frequency and intensity of algal blooms has been attributed to eutrophication, with further increases predicted because of climate change. Yet, the cellular-level changes that occur in blooming algae remain largely unknown. Comparative metatranscriptomics was used to investigate the underlying molecular mechanisms associated with a dinoflagellate bloom in a eutrophied estuary. Here we show that under bloom conditions, there is increased expression of metabolic pathways indicative of rapidly growing cells, including energy production, carbon metabolism, transporters and synthesis of cellular membrane components. In addition, there is a prominence of highly expressed genes involved in the synthesis of membrane-associated molecules, including those for the production of glycosaminoglycans (GAGs), which may serve roles in nutrient acquisition and/or cell surface adhesion. Biotin and thiamine synthesis genes also increased expression along with several cobalamin biosynthesis-associated genes, suggesting processing of B12 intermediates by dinoflagellates. The patterns in gene expression observed are consistent with bloom-forming dinoflagellates eliciting a cellular response to elevated nutrient demands and to promote interactions with their surrounding bacterial consortia, possibly in an effort to cultivate for enhancement of vitamin and nutrient exchanges and/or direct consumption. Our findings provide potential molecular targets for bloom characterization and management efforts. PMID:27935592

Leads in Arctic pack ice enable early phytoplankton blooms below snow-covered sea ice

PubMed Central

Assmy, Philipp; Fernández-Méndez, Mar; Duarte, Pedro; Meyer, Amelie; Randelhoff, Achim; Mundy, Christopher J.; Olsen, Lasse M.; Kauko, Hanna M.; Bailey, Allison; Chierici, Melissa; Cohen, Lana; Doulgeris, Anthony P.; Ehn, Jens K.; Fransson, Agneta; Gerland, Sebastian; Hop, Haakon; Hudson, Stephen R.; Hughes, Nick; Itkin, Polona; Johnsen, Geir; King, Jennifer A.; Koch, Boris P.; Koenig, Zoe; Kwasniewski, Slawomir; Laney, Samuel R.; Nicolaus, Marcel; Pavlov, Alexey K.; Polashenski, Christopher M.; Provost, Christine; Rösel, Anja; Sandbu, Marthe; Spreen, Gunnar; Smedsrud, Lars H.; Sundfjord, Arild; Taskjelle, Torbjørn; Tatarek, Agnieszka; Wiktor, Jozef; Wagner, Penelope M.; Wold, Anette; Steen, Harald; Granskog, Mats A.

2017-01-01

The Arctic icescape is rapidly transforming from a thicker multiyear ice cover to a thinner and largely seasonal first-year ice cover with significant consequences for Arctic primary production. One critical challenge is to understand how productivity will change within the next decades. Recent studies have reported extensive phytoplankton blooms beneath ponded sea ice during summer, indicating that satellite-based Arctic annual primary production estimates may be significantly underestimated. Here we present a unique time-series of a phytoplankton spring bloom observed beneath snow-covered Arctic pack ice. The bloom, dominated by the haptophyte algae Phaeocystis pouchetii, caused near depletion of the surface nitrate inventory and a decline in dissolved inorganic carbon by 16 ± 6 g C m−2. Ocean circulation characteristics in the area indicated that the bloom developed in situ despite the snow-covered sea ice. Leads in the dynamic ice cover provided added sunlight necessary to initiate and sustain the bloom. Phytoplankton blooms beneath snow-covered ice might become more common and widespread in the future Arctic Ocean with frequent lead formation due to thinner and more dynamic sea ice despite projected increases in high-Arctic snowfall. This could alter productivity, marine food webs and carbon sequestration in the Arctic Ocean. PMID:28102329

Harmful freshwater algal blooms, with an emphasis on cyanobacteria.

PubMed

Paerl, H W; Fulton, R S; Moisander, P H; Dyble, J

2001-04-04

Suspended algae, or phytoplankton, are the prime source of organic matter supporting food webs in freshwater ecosystems. Phytoplankton productivity is reliant on adequate nutrient supplies; however, increasing rates of nutrient supply, much of it manmade, fuels accelerating primary production or eutrophication. An obvious and problematic symptom of eutrophication is rapid growth and accumulations of phytoplankton, leading to discoloration of affected waters. These events are termed blooms. Blooms are a prime agent of water quality deterioration, including foul odors and tastes, deoxygenation of bottom waters (hypoxia and anoxia), toxicity, fish kills, and food web alterations. Toxins produced by blooms can adversely affect animal (including human) health in waters used for recreational and drinking purposes. Numerous freshwater genera within the diverse phyla comprising the phytoplankton are capable of forming blooms; however, the blue-green algae (or cyanobacteria) are the most notorious bloom formers. This is especially true for harmful toxic, surface-dwelling, scum-forming genera (e.g., Anabaena, Aphanizomenon, Nodularia, Microcystis) and some subsurface bloom-formers (Cylindrospermopsis, Oscillatoria) that are adept at exploiting nutrient-enriched conditions. They thrive in highly productive waters by being able to rapidly migrate between radiance-rich surface waters and nutrient-rich bottom waters. Furthermore, many harmful species are tolerant of extreme environmental conditions, including very high light levels, high temperatures, various degrees of desiccation, and periodic nutrient deprivation. Some of the most noxious cyanobacterial bloom genera (e.g., Anabaena, Aphanizomenon, Cylindrospermopsis, Nodularia) are capable of fixing atmospheric nitrogen (N2), enabling them to periodically dominate under nitrogen-limited conditions. Cyanobacteria produce a range of organic compounds, including those that are toxic to higher-ranked consumers, from zooplankton to further up the food chain. Both N2- and non-N2-fixing genera participate in mutualistic and symbiotic associations with microorganisms, higher plants, and animals. These associations appear to be of great benefit to their survival and periodic dominance. In this review, we address the ecological impacts and environmental controls of harmful blooms, with an emphasis on the ecology, physiology, and management of cyanobacterial bloom taxa. Combinations of physical, chemical, and biotic features of natural waters function in a synergistic fashion to determine the sensitivity of water bodies. In waters susceptible to blooms, human activities in water- and airsheds have been linked to the extent and magnitudes of blooms. Control and management of cyanobacterial and other phytoplankton blooms invariably includes nutrient input constraints, most often focused on nitrogen (N) and/or phosphorus (P). The types and amount of nutrient input constraints depend on hydrologic, climatic, geographic, and geologic factors, which interact with anthropogenic and natural nutrient input regimes. While single nutrient input constraints may be effective in some water bodies, dual N and P input reductions are usually required for effective long-term control and management of harmful blooms. In some systems where hydrologic manipulations (i.e., plentiful water supplies) are possible, reducing the water residence time by enhanced flushing and artificial mixing (in conjunction with nutrient input constraints) can be particularly effective alternatives. Implications of various management strategies, based on combined ecophysiological and environmental considerations, are discussed.

Chaos Theory and James Joyce's "ulysses": Leopold Bloom as a Human COMPLEX@SYSTEM^

NASA Astrophysics Data System (ADS)

Mackey, Peter Francis

1995-01-01

These four ideas apply as much to our lives as to the life of Leopold Bloom: (1) A trivial decision can wholly change a life. (2) A chance encounter can dramatically alter life's course. (3) A contingent nexus exists between consciousness and environment. (4) A structure of meaning helps us interpret life's chaos. These ideas also relate to a contemporary science called by some "chaos theory." The connection between Ulysses and chaos theory enhances our understanding of Bloom's day; it also suggests that this novel may be about the real process of life itself. The first chapter explains how Joyce's own essays and comments to friends compel attention to the links between Ulysses and chaos theory. His scientific contemporaries anticipated chaos theory, and their ideas seem to have rubbed off on him. We see this in his sense of trivial things and chance, his modernistic organizational impulses, and the contingent nature of Bloom's experience. The second chapter studies what chaos theory and Joyce's ideas tell us about "Ithaca," the episode which particularly implicates our processes of interpreting this text as well as life itself as we face their chaos. The third chapter examines Bloom's close feel for the aboriginal world, a contingency that clarifies his vulnerability to trivial changes. The fourth chapter studies how Bloom's stream of consciousness unfolds--from his chance encounters with trivial things. Beneath this stream's seeming chaos, Bloom's distinct personality endures, similar to how Joyce's schemas give Ulysses an imbedded, underlying order. The fifth chapter examines how trivial perturbations, such as Lyons' misunderstanding about "Throwaway," produce small crises for Bloom, exacerbating his seeming impotence before his lonely "fate.". The final chapter analyzes Bloom's views that fate and chance dictate his life. His views provide an opportunity to explore the implications chaos theory has for our understanding of free will and determinism. Ultimately, despite ungovernable fate and chance, Bloom asserts his will with Stephen and Molly, proving that he will live on, attempting to create his own destiny, wresting hope from the "chaos" of his experience.

Chain response of microbial loop to the decay of a diatom bloom in the East China Sea

NASA Astrophysics Data System (ADS)

Wu, Linnan; Lin, Shiquan; Huang, Lingfeng; Lu, Jiachang; Chen, Wenzhao; Guo, Weidong; Zhang, Wuchang; Xiao, Tian; Sun, Jun

2016-02-01

Algal bloom has been regarded as one of the key causes for the summer hypoxia phenomena in the bottom water adjacent to the Yangtze River estuary in the East China Sea. Although a series of biological processes within microbial loop are involved in the development of oxygen depletion during the bloom decay, little has been known about the dynamics of microorganisms in response to the decaying process of the bloom through trophic interaction context. Here, we report some preliminary results of our observations about the response of microbial loop to the bloom decay, based on the onboard incubation experiments for 10 days during a diatom bloom near the Yangtze River estuary in August, 2011. Light and dark incubations were conducted to simulate the bloom decay inside and below the euphotic layer, respectively. In the first stage of bloom decay (Day 0 to Day 4), rapid response was found in heterotrophic bacteria (HB) and ciliate growth, which was in accordance with the decrease of total Chl a, indicating a "bottom-up" control at the early stage of bloom decay. However, the increase of heterotrophic nanoflagellates (HNF) abundance was rather inconspicuous, suggesting predation pressure on HNF from ciliate or other predator at this stage. In the second stage (Day 4 to Day 8), HB and ciliate decreased rapidly with the increase of HNF, revealing the release of HNF form ciliate predation, which suggested a "top-down" control. In the last stage of our experiment (Day 8 to Day 10), the trophic interactions were more complex, but it also implied a "top-down" control within the microbial loop. Meanwhile, virus had been monitored in the whole process of our incubations. It was found that virus lysed microalgae at the first stage, and lysed HB at the second stage. In addition, the bacterial mortality was principally caused by HNF grazing in the light-sufficient incubations and by viral lysis in the light-insufficient incubations. Our results suggest tight trophic interactions within the microbial loop in the decaying process of the algal bloom, which may assist our understanding of the role of microbial loop in hypoxia formation in coastal waters.

FPGA-accelerated algorithm for the regular expression matching system

NASA Astrophysics Data System (ADS)

Russek, P.; Wiatr, K.

2015-01-01

This article describes an algorithm to support a regular expressions matching system. The goal was to achieve an attractive performance system with low energy consumption. The basic idea of the algorithm comes from a concept of the Bloom filter. It starts from the extraction of static sub-strings for strings of regular expressions. The algorithm is devised to gain from its decomposition into parts which are intended to be executed by custom hardware and the central processing unit (CPU). The pipelined custom processor architecture is proposed and a software algorithm explained accordingly. The software part of the algorithm was coded in C and runs on a processor from the ARM family. The hardware architecture was described in VHDL and implemented in field programmable gate array (FPGA). The performance results and required resources of the above experiments are given. An example of target application for the presented solution is computer and network security systems. The idea was tested on nearly 100,000 body-based viruses from the ClamAV virus database. The solution is intended for the emerging technology of clusters of low-energy computing nodes.

Comparative Metagenomics of Toxic Freshwater Cyanobacteria Bloom Communities on Two Continents

DOE Office of Scientific and Technical Information (OSTI.GOV)

Steffen, Morgan M; Li, Zhou; Effler, Chad

2012-01-01

Toxic cyanobacterial blooms have persisted in freshwater systems around the world for centuries and appear to be globally increasing in frequency and severity. Toxins produced by bloom-associated cyanobacteria can have drastic impacts on the ecosystem and surrounding communities, and bloom biomass can disrupt aquatic food webs and act as a driver for hypoxia. Little is currently known regarding the genomic content of the Microcystis strains that form blooms or the companion heterotrophic community associated with bloom events. To address these issues, we examined the bloomassociated microbial communities in single samples from Lake Erie (North America), Lake Tai (Taihu, China), andmore » Grand Lakes St. Marys (OH, USA) using comparative metagenomics. Together the Cyanobacteria and Proteobacteria comprised .90% of each bloom bacterial community sample, although the dominant phylum varied between systems. Relative to the existing Microcystis aeruginosa NIES 843 genome, sequences from Lake Erie and Taihu revealed a number of metagenomic islands that were absent in the environmental samples. Moreover, despite variation in the phylogenetic assignments of bloomassociated organisms, the functional potential of bloom members remained relatively constant between systems. This pattern was particularly noticeable in the genomic contribution of nitrogen assimilation genes. In Taihu, the genetic elements associated with the assimilation and metabolism of nitrogen were predominantly associated with Proteobacteria, while these functions in the North American lakes were primarily contributed to by the Cyanobacteria. Our observations build on an emerging body of metagenomic surveys describing the functional potential of microbial communities as more highly conserved than that of their phylogenetic makeup within natural systems.« less

Effects of temperature and salinity on the growth of Alexandrium (Dinophyceae) isolates from the Salish Sea

PubMed Central

Bill, Brian D.; Moore, Stephanie K.; Hay, Levi R.; Anderson, Donald M.; Trainer, Vera L.

2016-01-01

Toxin-producing blooms of dinoflagellates in the genus Alexandrium have plagued the inhabitants of the Salish Sea for centuries. Yet the environmental conditions that promote accelerated growth of this organism, a producer of paralytic shellfish toxins, is lacking. This study quantitatively determined the growth response of two Alexandrium isolates to a range of temperatures and salinities, factors that will strongly respond to future climate change scenarios. An empirical equation, derived from observed growth rates describing the temperature and salinity dependence of growth, was used to hindcast bloom risk. Hindcasting was achieved by comparing predicted growth rates, calculated from in situ temperature and salinity data from Quartermaster Harbor, with corresponding Alexandrium cell counts and shellfish toxin data. The greatest bloom risk, defined at μ>0.25 d−1, generally occurred from April through November annually; however, growth rates rarely fell below 0.10 d−1. Except for a few occasions, Alexandrium cells were only observed during the periods of highest bloom risk and paralytic shellfish toxins above the regulatory limit always fell within the periods of predicted bloom occurrence. While acknowledging that Alexandrium growth rates are affected by other abiotic and biotic factors, such as grazing pressure and nutrient availability, the use of this empirical growth function to predict higher risk time frames for blooms and toxic shellfish within the Salish Sea provides the groundwork for a more comprehensive biological model of Alexandrium bloom dynamics in the region and will enhance our ability to forecast blooms in the Salish Sea under future climate change scenarios. PMID:27037588

Biogeochemical cycling of permeable sediments in a shelf sea environment: Celtic Sea, a seasonal study.

NASA Astrophysics Data System (ADS)

Reynolds, S.; Klar, J. K.; Kitidis, V. A.; Chapman-Greig, L.; Panton, A.; Thompson, C.; Statham, P. J.; Fones, G. R.

2016-02-01

Shelf seas are globally important in contributing to the biogeochemical cycling of carbon and nutrients. Much of the benthic environment found in shelf seas comprise of relic permeable sands whereby advective pore-water flow processes govern the biogeochemical cycling within these sediments. To further elucidate our understanding of the biogeochemistry of these systems, flow-through reactors were employed during a field campaign as part of the UK led Shelf Sea Biogeochemistry Programme. Three cruises took place in the southern Celtic Sea in 2015 and were timed to sample pre-bloom, post-bloom and late summer conditions. Preliminary data show marked differences with the pre-bloom and late summer flow-through incubations when compared with the post-bloom. Pre-bloom and late summer oxygen consumption rates ranged between 0.18 mmol O2 m-3 d-1 and 0.15 mmol O2 m-3 d-1 respectively. However, post-bloom oxygen consumption rates were almost double at 0.29 mmol O2 m-3 d-1. Differences were also observed in the amount of iron (II) being released with no marked releases from the pre-bloom and late summer but with significant contributions of up to 140 nM during the post-bloom incubation. These initial findings demonstrate the seasonal variability and extent of the biogeochemical cycling of benthic permeable sediments. Additional measurements of inorganic nutrients, dissolved organic carbon and denitrification rates will contribute further to our understanding of sandy sediments in a shelf sea environment and their capacity to act as a carbon and nutrient source or sink.

Phytoplankton bloom in the Bay of Biscay and off the coast of Brittany, France

NASA Technical Reports Server (NTRS)

2002-01-01

This MODIS true-color image of France and a small strip of Spain shows the characteristic blue-green swirls of phytoplankton blooming in the Bay of Biscay, as well as another bloom, mostly obscured by clouds, to the east of Brittany in the upper left corner of the image.

Use of Bloom's Taxonomy in Developing Reading Comprehension Specifications

ERIC Educational Resources Information Center

Luebke, Stephen; Lorie, James

2013-01-01

This article is a brief account of the use of Bloom's Taxonomy of Educational Objectives (Bloom, Engelhart, Furst, Hill, & Krathwohl, 1956) by staff of the Law School Admission Council in the 1990 development of redesigned specifications for the Reading Comprehension section of the Law School Admission Test. Summary item statistics for the…

Effect of Green Macroalgal Blooms on the Survival, Growth, and Behavior of Cockles in Pacific NW Estuaries

EPA Science Inventory

Nutrient over-enrichment of estuaries is a pervasive issue worldwide that often results in blooms of green macroalgae (GMA; Ulva spp.), which can have disruptive and deleterious effects to estuarine flora and fauna. However, little is known of the effects of GMA blooms on the pr...

Bennett, Bloom and Boyer: Toward a Critical Discussion.

ERIC Educational Resources Information Center

Reitz, Charles

An overview is provided of the educational philosophies of Allan Bloom, Lynne V. Cheney, William Bennett, and Ernest Boyer, with special focus on their political underpinnings. The essay begins with an examination of the issues discussed in "The Closing of the American Mind," by Allan Bloom. Concern and disagreement is expressed about:…

Monitoring of Harmful Algal Blooms through Drinking Water Treatment Facilities Located on Lake Erie in the 2014 and 2015 Bloom Seasons

EPA Science Inventory

A number of drinking water treatment plants on Lake Erie have supplied water samples on a monthly basis for analysis related to the occurrence of harmful algal blooms (HABs). General water quality parameters including total organic carbon (TOC), orthophosphate, and chlorophyll-A ...

Self-Awareness and Personal Growth: Theory and Application of Bloom's Taxonomy

ERIC Educational Resources Information Center

Ugur, Hasan; Constantinescu, Petru-Madalin; Stevens, Michael J.

2015-01-01

Problem Statement: In this article, we summarize a group-based, self-development curriculum based on humanistic principles, framed by contemporary self-determination theory (SDT), and designed in accordance with Bloom's Taxonomy. The processes of awareness and integration are common to SDT and Bloom's Taxonomy, and to our knowledge, have not been…

16. INTERIOR OF ENGINE ROOM, CONTAINING MESTACORLISS CROSSCOMPOUND ENGINE, FOR ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

16. INTERIOR OF ENGINE ROOM, CONTAINING MESTA-CORLISS CROSS-COMPOUND ENGINE, FOR 40" BLOOMING MILL. THIS VIEW IS TAKEN FROM THE HIGH-PRESSURE SIDE OF THE ENGINE SHOWING THE SERVICE PLATFORM - Republic Iron & Steel Company, Youngstown Works, Blooming Mill & Blooming Mill Engines, North of Poland Avenue, Youngstown, Mahoning County, OH

Harmful algal bloom smart device application: using image analysis and machine learning techniques for classification of harmful algal blooms

EPA Science Inventory

Northern Kentucky University and the U.S. EPA Office of Research Development in Cincinnati Agency are collaborating to develop a harmful algal bloom detection algorithm that estimates the presence of cyanobacteria in freshwater systems by image analysis. Green and blue-green alg...

Climbing Bloom's Taxonomy Pyramid: Lessons from a Graduate Histology Course

ERIC Educational Resources Information Center

Zaidi, Nikki B.; Hwang, Charles; Scott, Sara; Stallard, Stefanie; Purkiss, Joel; Hortsch, Michael

2017-01-01

Bloom's taxonomy was adopted to create a subject-specific scoring tool for histology multiple-choice questions (MCQs). This Bloom's Taxonomy Histology Tool (BTHT) was used to analyze teacher- and student-generated quiz and examination questions from a graduate level histology course. Multiple-choice questions using histological images were…

Transcriptomic Analysis of Flower Blooming in Jasminum sambac through De Novo RNA Sequencing.

PubMed

Li, Yong-Hua; Zhang, Wei; Li, Yong

2015-06-10

Flower blooming is a critical and complicated plant developmental process in flowering plants. However, insufficient information is available about the complex network that regulates flower blooming in Jasminum sambac. In this study, we used the RNA-Seq platform to analyze the molecular regulation of flower blooming in J. sambac by comparing the transcript profiles at two flower developmental stages: budding and blooming. A total of 4577 differentially-expressed genes (DEGs) were identified between the two floral stages. The Gene Ontology and the Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses revealed that the DEGs in the "oxidation-reduction process", "extracellular region", "steroid biosynthesis", "glycosphingolipid biosynthesis", "plant hormone signal transduction" and "pentose and glucuronate interconversions" might be associated with flower development. A total of 103 and 92 unigenes exhibited sequence similarities to the known flower development and floral scent genes from other plants. Among these unigenes, five flower development and 19 floral scent unigenes exhibited at least four-fold differences in expression between the two stages. Our results provide abundant genetic resources for studying the flower blooming mechanisms and molecular breeding of J. sambac.

Delaying fat bloom formation in dark chocolate by adding sorbitan monostearate or cocoa butter stearin.

PubMed

Buscato, Monise Helen Masuchi; Hara, Larissa Miho; Bonomi, Élida Castilho; Calligaris, Guilherme de Andrade; Cardoso, Lisandro Pavie; Grimaldi, Renato; Kieckbusch, Theo Guenter

2018-08-01

Two formulations of dark chocolate were developed by adding cocoa butter stearin (CBSt) or sorbitan monostearate (SMS) and compared to a standard formulation in order to investigate fat bloom formation over time. Fat bloom was monitored by Whiteness Index (WI), melting behavior and polymorphism determinations, in bars stored during 90 days at 20 °C and under oscillating temperature between 20 and 32 °C. All samples stored at 20 °C did not develop fat bloom and the required β(V) form was maintained. Under oscillating storage condition, samples with CBSt (6.0%, w/w) and SMS (0.15%, w/w) delayed the surface fat bloom formation by at least 45 and 15 days, respectively, compared to standard chocolate, observed visually and through WI increments. The β(V) to β(VI) polymorphic transition correlated well with the WI, and also with changes in DSC thermograms, confirming the higher effectiveness of specific triacylglycerol (mainly StOSt) in delaying bloom formation. Copyright © 2018 Elsevier Ltd. All rights reserved.

Environmental dynamics of red Noctiluca scintillans bloom in tropical coastal waters.

PubMed

Baliarsingh, S K; Lotliker, Aneesh A; Trainer, Vera L; Wells, Mark L; Parida, Chandanlal; Sahu, Biraja K; Srichandan, Suchismita; Sahoo, Subhashree; Sahu, K C; Kumar, T Sinivasa

2016-10-15

An intense bloom of red Noctiluca scintillans (NS) occurred off the Rushikulya estuarine region along the east coast of India, an important site for mass nesting events of the vulnerable Olive Ridley sea turtle. At its peak, densities of NS were 3.3×10(5) cells-l(-1), with low relative abundance of other phytoplankton. The peak bloom coincided with high abundance of gelatinous planktivores which may have facilitated bloom development by their grazing on other zooplankton, particularly copepods. Ammonium concentrations increased by approximately 4-fold in the later stages of bloom, coincident with stable NS abundance and chlorophyll concentrations in the nano- and microplankton. This increase likely was attributable to release of intracellular ammonium accumulated through NS grazing. Dissolved oxygen concentrations decreased in sub-surface waters to near hypoxia. Micro-phytoplankton increasingly dominated chlorophyll-a biomass as the bloom declined, with diminishing picoplankton abundance likely the result of high predation by the ciliate Mesodinium rubrum. Together, these data illustrate factors that can disrupt ecosystem balance in this critically important Indian coastal region. Copyright © 2016 Elsevier Ltd. All rights reserved.

Lake Granbury and Lake Whitney Assessment Initiative Final Scientific/Technical Report Summary

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harris, B. L.; Roelke, Daniel; Brooks, Bryan

A team of Texas AgriLife Research, Baylor University and University of Texas at Arlington researchers studied the biology and ecology of Prymnesium parvum (golden algae) in Texas lakes using a three-fold approach that involved system-wide monitoring, experimentation at the microcosm and mesocosm scales, and mathematical modeling. The following are conclusions, to date, regarding this organism's ecology and potential strategies for mitigation of blooms by this organism. In-lake monitoring revealed that golden algae are present throughout the year, even in lakes where blooms do not occur. Compilation of our field monitoring data with data collected by Texas Parks and Wildlife andmore » Brazos River Authority (a period spanning a decade) revealed that inflow and salinity variables affect bloom formations. Thresholds for algae populations vary per lake, likely due to adaptations to local conditions, and also to variations in lake-basin morphometry, especially the presence of coves that may serve as hydraulic storage zones for P. parvum populations. More specifically, our in-lake monitoring showed that the highly toxic bloom that occurred in Lake Granbury in the winter of 2006/2007 was eliminated by increased river inflow events. The bloom was flushed from the system. The lower salinities that resulted contributed to golden algae not blooming in the following years. However, flushing is not an absolute requirement for bloom termination. Laboratory experiments have shown that growth of golden algae can occur at salinities ~1-2 psu but only when temperatures are also low. This helps to explain why blooms are possible during winter months in Texas lakes. Our in-lake experiments in Lake Whitney and Lake Waco, as well as our laboratory experiments, revealed that cyanobacteria, or some other bacteria capable of producing algicides, were able to prevent golden algae from blooming. Identification of this organism is a high priority as it may be a key to managing golden algae blooms. Our numerical modeling results support the idea that cyanobacteria, through allelopathy, control the timing of golden algae blooms in Lake Granbury. The in-lake experiments in Lake Whitney and Lake Waco also revealed that as golden algae blooms develop, there are natural enemies (a species of rotifer, and a virus) that help slow the population growth. Again, better characterization of these organisms is a high priority as it may be key to managing golden algae blooms. Our laboratory and in-lake experiments and field monitoring have shown that nutrient additions will remove toxicity and prevent golden algae from blooming. In fact, other algae displace the golden algae after nutrient additions. Additions of ammonia are particularly effective, even at low doses (much lower than what is employed in fish hatchery ponds). Application of ammonia in limited areas of lakes, such as in coves, should be explored as a management option. The laboratory experiments and field monitoring also show that the potency of toxins produced by P. parvum is greatly reduced when water pH is lower, closer to neutral levels. Application of mild acid to limited areas of lakes (but not to a level where acidic conditions are created), such as in coves, should be explored as a management option. Finally, our field monitoring and mathematical modeling revealed that flushing/dilution at high enough levels could prevent P. parvum from forming blooms and/or terminate existing blooms. This technique could work using deeper waters within a lake to flush the surface waters of limited areas of the same lakes, such as in coves and should be explored as a management option. In this way, water releases from upstream reservoirs would not be necessary and there would be no addition of nutrients in the lake.« less

Satellite Evidence that E. huxleyi Phytoplankton Blooms Weaken Marine Carbon Sinks

NASA Astrophysics Data System (ADS)

Kondrik, D. V.; Pozdnyakov, D. V.; Johannessen, O. M.

2018-01-01

Phytoplankton blooms of the coccolithophore Emiliania huxleyi are known to produce CO2, causing less uptake of atmospheric CO2 by the ocean, but a global assessment of this phenomenon has so far not been quantified. Therefore, here we quantify the increase in CO2 partial pressure (ΔpCO2) at the ocean surface within E. huxleyi blooms for polar and subpolar seas using an 18 year ocean color time series (1998-2015). When normalized to pCO2 in the absence of bloom, the mean and maximum ΔpCO2 values within the bloom areas varied between 21.0%-43.3% and 31.6%-62.5%, respectively. These results might have appreciable implications for climatology, marine chemistry, and ecology.

Nature and composition of fat bloom from palm kernel stearin and hydrogenated palm kernel stearin compound chocolates.

PubMed

Smith, Kevin W; Cain, Fred W; Talbot, Geoff

2004-08-25

Palm kernel stearin and hydrogenated palm kernel stearin can be used to prepare compound chocolate bars or coatings. The objective of this study was to characterize the chemical composition, polymorphism, and melting behavior of the bloom that develops on bars of compound chocolate prepared using these fats. Bars were stored for 1 year at 15, 20, or 25 degrees C. At 15 and 20 degrees C the bloom was enriched in cocoa butter triacylglycerols, with respect to the main fat phase, whereas at 25 degrees C the enrichment was with palm kernel triacylglycerols. The bloom consisted principally of solid fat and was sharper melting than was the fat in the chocolate. Polymorphic transitions from the initial beta' phase to the beta phase accompanied the formation of bloom at all temperatures.

Early onset of a microcystin-producing cyanobacterial bloom in an agriculturally-influenced Great Lakes tributary

NASA Astrophysics Data System (ADS)

McKay, Robert Michael L.; Tuttle, Taylor; Reitz, Laura A.; Bullerjahn, George S.; Cody, William R.; McDowell, Adam J.; Davis, Timothy W.

2018-05-01

In late May 2016, a cyanobacterial harmful algal bloom (cHAB) was detected in the Maumee River, the largest tributary to Lake Erie, the southernmost lake of the Laurentian Great Lakes system. Testing on 31 May identified Planktothrix agardhii as the dominant cyanobacterium with cell abundance exceeding 1.7×10 9 cells/L and total microcystins (MC) reaching 19 μg/L MC-LR equivalents, a level over 10-fold higher than the 2015 revised U.S. Environmental Protection Agency (EPA) national health advisory levels for drinking water exposure to adults. Low river discharge coincident with negligible precipitation through the latter half of May coincided with an 80% decline in river turbidity that likely favored bloom formation by a low-light adapted P. agardhii population. Also contributing to the cHAB were high initial nutrient loads and an increase of the river temperature from 13°C to 26°C over this same period. The bloom persisted through 5 June with microcystins exceeding 22 μg/L MC-LR equivalents at the bloom peak. By 6 June, the river had returned to its muddy character following a rain event and sampling on 7 June detected only low levels of toxin (<0.6 μg/L) at public water systems located near the bloom origin. The elevated toxin production associated with this early onset bloom was without precedent for the Maumee River and an unique attribute of the cHAB was the high proportion of potentially-toxic genotypes. Whereas Planktothrix spp. is common in lotic environments, and has been previously detected in the Maumee, blooms are not commonly reported. This early onset, microcystin-producing cHAB provided a rare opportunity to glean insights into environmental factors that promote bloom development and dominance by Planktothrix in lotic environments.

Intra- and interannual dynamics of dinoflagellate bloom species in the James River, an urban tidal estuary in Virginia, USA

NASA Astrophysics Data System (ADS)

Echevarria, M. A.; Mulholland, M. R.; Filippino, K.; Egerton, T.

2016-02-01

Algal blooms occur throughout the year in the tidal tributaries of Chesapeake Bay. The James River is the largest river in Virginia and third largest tributary of the Bay. Of the nearly 1500 species found in the estuary, two dinoflagellates; Heterocapsa triquetra and Cochlodinium polykrikoides have historically formed large seasonal algal blooms in spring and summer respectively, lasting several weeks to months annually. Additionally, the toxic dinoflagellate Alexandrium monilatum has emerged as an annual late summer bloom producer with increasing abundance in the region over the last nine years. These blooms have occurred in the lower James River, including meso- and polyhaline waters. Presented here are comparisons of the temporal and spatial extent and magnitude of these three dinoflagellate species over a two-year period (2014-2015). In 2014 dinoflagellate abundance was low compared to prior years. In contrast, massive spring and summer blooms occurred in 2015 with extended durations. In 2015, H. triquetra reached a maximum concentration of >84,000 cells/ml, with densities >103 cells/mL observed over a six week period, compared to no visible bloom the year before and a maximum of only 6200 cells/ml. Similarly in 2015, C. polykrikoides reached maximum cell densities of >41,000 cells/ml, with densities >103 cells/mL observed over a seven week period, compared to a maximum the year before of <11,000 cells/ml. A. monilatum reached a maximum of >7,500 cells/ml over a three week period in August 2015, with no bloom recorded in 2014. Multiple environmental parameters likely contributed to the interannual variability in bloom formation and duration. Temperature appeared to be a significant factor, with cooler than average surface water during the summer of 2014. In addition, the effect of prevailing wind patterns, precipitation, salinity, nutrient concentrations and sediment re-suspension were examined.

Plant growth stage-specific injury and economic injury level for verde plant bug, Creontiades signatus (Hemiptera: Miridae), on cotton: effect of bloom period of infestation.

PubMed

Brewer, Michael J; Anderson, Darwin J; Armstrong, J Scott

2013-10-01

Verde plant bugs, Creontiades signatus Distant (Hemiptera: Miridae), were released onto caged cotton, Cossypium hirsutum L., for a 1-wk period to characterize the effects of insect density and bloom period of infestation on cotton injury and yield in 2011 and 2012, Corpus Christi, TX. When plants were infested during early bloom (10-11 nodes above first white flower), a linear decline in fruit retention and boll load and a linear increase in boll injury were detected as verde plant bug infestation levels increased from an average of 0.5 to 4 bugs per plant. Lint and seed yield per plant showed a corresponding decline. Fruit retention, boll load, and yield were not affected on plants infested 1 wk later at peak bloom (8-9 nodes above first white flower), even though boll injury increased as infestation levels increased. Second-year testing verified boll injury but not yield loss, when infestations occurred at peak bloom. Incidence of cotton boll rot, known to be associated with verde plant bug feeding, was low to modest (< 1% [2012] to 12% [2011] of bolls with disease symptoms), and drought stress persisted throughout the study. Caging effect was minimal: a 10% fruit retention decline was associated with caging, and the effect was not detectable in the other measurements. Overall, reduced fruit retention and boll load caused by verde plant bug were important contributors to yield decline, damage potential was greatest during the early bloom period of infestation, and a simple linear response best described the yield response-insect density relationship at early bloom. Confirmation that cotton after peak bloom was less prone to verde plant bug injury and an early bloom-specific economic injury level were key findings that can improve integrated pest management decision-making for dryland cotton, at least under low-rainfall growing conditions.

iPTF Discoveries of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Papadogiannakis, S.; Taddia, F.; Petrushevska, T.; Ferretti, R.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Roy, R.; Hangard, L.; Vreeswijk, P.; Horesh, A.; Manulis, I.; Rubin, A.; Yaron, O.; Leloudas, G.; Khazov, D.; Soumagnac, M.; Knezevic, S.; Johansson, J.; Nir, G.; Cao, Y.; Blagorodnova, N.; Kulkarni, S.

2016-05-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artefacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Core-Collapse Supernovae

NASA Astrophysics Data System (ADS)

Taddia, F.; Ferretti, R.; Papadogiannakis, S.; Petrushevska, T.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Roy, R.; Hangard, L.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Bar, I.; Cao, Y.; Kulkarni, S.; Blagorodnova, N.

2016-05-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following core-collapse SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Core-Collapse Supernovae

NASA Astrophysics Data System (ADS)

Taddia, F.; Ferretti, R.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Petrushevska, T.; Roy, R.; Hangard, L.; De Cia, A.; Vreeswijk, P.; Horesh, A.; Manulis, I.; Sagiv, I.; Rubin, A.; Yaron, O.; Leloudas, G.; Khazov, D.; Soumagnac, M.; Bilgi, P.

2015-04-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Core-Collapse SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernova

NASA Astrophysics Data System (ADS)

Petrushevska, T.; Ferretti, R.; Fremling, C.; Hangard, L.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Roy, R.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Bilgi, P.; Cao, Y.; Duggan, G.; Lunnan, R.; Andreoni, I.

2015-10-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent SNe Ia

NASA Astrophysics Data System (ADS)

Ferretti, R.; Fremling, C.; Johansson, J.; Karamehmetoglu, E.; Migotto, K.; Nyholm, A.; Papadogiannakis, S.; Taddia, F.; Petrushevska, T.; Roy, R.; Ben-Ami, S.; De Cia, A.; Dzigan, Y.; Horesh, A.; Khazov, D.; Manulis, I.; Rubin, A.; Sagiv, I.; Vreeswijk, P.; Yaron, O.; Bilgi, P.; Cao, Y.; Duggan, G.

2015-02-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Papadogiannakis, S.; Taddia, F.; Ferretti, R.; Fremling, C.; Karamehmetoglu, E.; Petrushevska, T.; Nyholm, A.; Roy, R.; Hangard, L.; Vreeswijk, P.; Horesh, A.; Manulis, I.; Rubin, A.; Yaron, O.; Leloudas, G.; Khazov, D.; Soumagnac, M.; Knezevic, S.; Johansson, J.; Lunnan, R.; Blagorodnova, N.; Cao, Y.; Cenk, S. B.

2016-01-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Ferretti, R.; Fremling, C.; Hangard, L.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Petrushevska, T.; Roy, R.; Taddia, F.; Horesh, A.; Khazov, D.; Knezevic, S.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Cao, Y.; Duggan, G.; Lunnan, R.; Blagorodnova, N.

2015-11-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Core-Collapse Supernovae

NASA Astrophysics Data System (ADS)

Taddia, F.; Ferretti, R.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Petrushevska, T.; Roy, R.; Hangard, L.; Vreeswijk, P.; Horesh, A.; Manulis, I.; Rubin, A.; Yaron, O.; Leloudas, G.; Khazov, D.; Soumagnac, M.; Knezevic, S.; Johansson, J.; Duggan, G.; Lunnan, R.; Cao, Y.

2015-09-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Core-Collapse SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discovery of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Hangard, L.; Ferretti, R.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Petrushevska, T.; Roy, R.; Bar, I.; Horesh, A.; Johansson, J.; Khazov, D.; Knezevic, S.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Cao, Y.; Kulkarni, S.; Lunnan, R.; Ravi, V.; Vedantham, H. K.; Yan, L.

2016-04-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Core-Collapse Supernovae

NASA Astrophysics Data System (ADS)

Taddia, F.; Ferretti, R.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Petrushevska, T.; Roy, R.; Hangard, L.; Vreeswijk, P.; Horesh, A.; Manulis, I.; Rubin, A.; Yaron, O.; Leloudas, G.; Khazov, D.; Soumagnac, M.; Knezevic, S.; Johansson, J.; Lunnan, R.; Cao, Y.; Miller, A.

2015-11-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Core-Collapse SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Petrushevska, T.; Ferretti, R.; Fremling, C.; Hangard, L.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Roy, R.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Bilgi, P.; Cao, Y.; Duggan, G.; Lunnan, R.

2016-02-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discovery of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Hangard, L.; Taddia, F.; Ferretti, R.; Papadogiannakis, S.; Petrushevska, T.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Roy, R.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Bar, I.; Lunnan, R.; Cenk, S. B.

2016-02-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Papadogiannakis, S.; Fremling, C.; Hangard, L.; Karamehmetoglu, E.; Nyholm, A.; Ferretti, R.; Petrushevska, T.; Roy, R.; Taddia, F.; Bar, I.; Horesh, A.; Johansson, J.; Knezevic, S.; Leloudas, G.; Manulis, I.; Nir, G.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Arcavi, I.; Howell, D. A.; McCully, C.; Hosseinzadeh, G.; Valenti, S.; Blagorodnova, N.; Cao, Y.; Duggan, G.; Ravi, V.; Lunnan, R.

2016-03-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF discoveries of recent type Ia supernovae

NASA Astrophysics Data System (ADS)

Papadogiannakis, S.; Ferretti, R.; Fremling, C.; Hangard, L.; Karamehmetoglu, E.; Nyholm, A.; Petrushevska, T.; Roy, R.; De Cia, A.; Vreeswijk, P.; Horesh, A.; Manulis, I.; Sagiv, I.; Rubin, A.; Yaron, O.; Leloudas, G.; Khazov, D.; Soumagnac, M.; Knezevic, S.; Cenko, S. B.; Capone, J.; Bartakk, M.

2015-09-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discovery of Recent Type Ia Supernova

NASA Astrophysics Data System (ADS)

Hangard, L.; Petrushevska, T.; Papadogiannakis, S.; Ferretti, R.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Roy, R.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Kasliwal, M.

2015-10-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Petrushevska, T.; Ferretti, R.; Fremling, C.; Hangard, L.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Roy, R.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Bilgi, P.; Cao, Y.; Duggan, G.; Lunnan, R.; Neill, J. D.; Walters, R.

2016-04-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Papadogiannakis, S.; Taddia, F.; Petrushevska, T.; Fremling, C.; Hangard, L.; Johansson, J.; Karamehmetoglu, E.; Migotto, K.; Nyholm, A.; Roy, R.; Ben-Ami, S.; De Cia, A.; Dzigan, Y.; Horesh, A.; Khazov, D.; Soumagnac, M.; Manulis, I.; Rubin, A.; Sagiv, I.; Vreeswijk, P.; Yaron, O.; Bond, H.; Bilgi, P.; Cao, Y.; Duggan, G.

2015-03-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discovery of Recent Type Ia Supernovae

NASA Astrophysics Data System (ADS)

Hangard, L.; Ferretti, R.; Papadogiannakis, S.; Petrushevska, T.; Fremling, C.; Karamehmetoglu, E.; Nyholm, A.; Roy, R.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Cook, D.

2015-12-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

iPTF Discoveries of Recent Type Ia Supernova

NASA Astrophysics Data System (ADS)

Petrushevska, T.; Ferretti, R.; Fremling, C.; Hangard, L.; Karamehmetoglu, E.; Nyholm, A.; Papadogiannakis, S.; Roy, R.; Horesh, A.; Khazov, D.; Knezevic, S.; Johansson, J.; Leloudas, G.; Manulis, I.; Rubin, A.; Soumagnac, M.; Vreeswijk, P.; Yaron, O.; Bilgi, P.; Cao, Y.; Duggan, G.; Lunnan, R.; Jencson, J.

2015-11-01

The intermediate Palomar Transient Factory (ATel #4807) reports the discovery and classification of the following Type Ia SNe. Our automated candidate vetting to distinguish a real astrophysical source (1.0) from bogus artifacts (0.0) is powered by three generations of machine learning algorithms: RB2 (Brink et al. 2013MNRAS.435.1047B), RB4 (Rebbapragada et al. 2015AAS...22543402R) and RB5 (Wozniak et al. 2013AAS...22143105W).

Gastrointestinal Emergency Room Admissions and Florida Red Tide Blooms.

PubMed

Kirkpatrick, Barbara; Bean, Judy A; Fleming, Lora E; Kirkpatrick, Gary; Grief, Lynne; Nierenberg, Kate; Reich, Andrew; Watkins, Sharon; Naar, Jerome

2010-01-01

Human exposure to brevetoxins during Florida red tide blooms formed by Karenia brevis has been documented to cause acute gastrointestinal, neurologic, and respiratory health effects.. Traditionally, the routes of brevetoxin exposure have been through the consumption of contaminated bivalve shellfish and the inhalation of contaminated aerosols. However, recent studies using more sensitive methods have demonstrated the presence of brevetoxins in many components of the aquatic food web which may indicate potential alternative routes for human exposure.This study examined whether the presence of a Florida red tide bloom affected the rates of admission for a gastrointestinal diagnosis to a hospital emergency room in Sarasota, FL. The rates of gastrointestinal diagnoses admissions were compared for a 3-month time period in 2001 when Florida red tide bloom was present onshore to the same 3-month period in 2002 when no Florida red tide bloom occurred. A significant 40% increase in the total number of gastrointestinal emergency room admissions for the Florida red tide bloom period was found compared to the non red tide period.These results suggest that the healthcare community may experience a significant and unrecognized impact from patients needing emergency medical care for gastrointestinal illnesses during Florida red tide blooms. Thus, additional studies characterizing the potential sources of exposure to the toxins, as well as the dose/effect relationship of brevetoxin exposure, should be undertaken.

Gastrointestinal Emergency Room Admissions and Florida Red Tide Blooms

PubMed Central

Kirkpatrick, Barbara; Bean, Judy A; Fleming, Lora E; Kirkpatrick, Gary; Grief, Lynne; Nierenberg, Kate; Reich, Andrew; Watkins, Sharon; Naar, Jerome

2009-01-01

Human exposure to brevetoxins during Florida red tide blooms formed by Karenia brevis has been documented to cause acute gastrointestinal, neurologic, and respiratory health effects.. Traditionally, the routes of brevetoxin exposure have been through the consumption of contaminated bivalve shellfish and the inhalation of contaminated aerosols. However, recent studies using more sensitive methods have demonstrated the presence of brevetoxins in many components of the aquatic food web which may indicate potential alternative routes for human exposure. This study examined whether the presence of a Florida red tide bloom affected the rates of admission for a gastrointestinal diagnosis to a hospital emergency room in Sarasota, FL. The rates of gastrointestinal diagnoses admissions were compared for a 3-month time period in 2001 when Florida red tide bloom was present onshore to the same 3-month period in 2002 when no Florida red tide bloom occurred. A significant 40% increase in the total number of gastrointestinal emergency room admissions for the Florida red tide bloom period was found compared to the non red tide period. These results suggest that the healthcare community may experience a significant and unrecognized impact from patients needing emergency medical care for gastrointestinal illnesses during Florida red tide blooms. Thus, additional studies characterizing the potential sources of exposure to the toxins, as well as the dose/effect relationship of brevetoxin exposure, should be undertaken. PMID:20161425

Rapid bacterial mineralization of organic carbon produced during a phytoplankton bloom induced by natural iron fertilization in the Southern Ocean

NASA Astrophysics Data System (ADS)

Obernosterer, Ingrid; Christaki, Urania; Lefèvre, Dominique; Catala, Philippe; Van Wambeke, France; Lebaron, Philippe

2008-03-01

The response of heterotrophic bacteria ( Bacteria and Archaea) to the spring phytoplankton bloom that occurs annually above the Kerguelen Plateau (Southern Ocean) due to natural iron fertilization was investigated during the KErguelen Ocean and Plateau compared Study (KEOPS) cruise in January-February 2005. In surface waters (upper 100 m) in the core of the phytoplankton bloom, heterotrophic bacteria were, on an average, 3-fold more abundant and revealed rates of production ([ 3H] leucine incorporation) and respiration (<0.8 μm size fraction) that exceeded those in surrounding high-nutrient low-chlorophyll (HNLC) waters by factors of 6 and 5, respectively. These differences in bacterial metabolic activities were attributable to high-nucleic-acid-containing cells that dominated (≈80% of total cell abundance) the heterotrophic bacterial community associated with the phytoplankton bloom. Bacterial growth efficiencies varied between 14% and 20% inside the bloom and were <10% in HNLC waters. Results from bottle-incubation experiments performed at the bloom station indicated that iron had no direct but an indirect effect on heterotrophic bacterial activity, due to the stimulation by phytoplankton-derived dissolved organic matter. Within the Kerguelen bloom, bacterial carbon demand accounted for roughly 45% of gross community production. These results indicate that heterotrophic bacteria processed a significant portion of primary production, with most of it being rapidly respired.

Unpacking the Revised Bloom's Taxonomy: Developing Case-Based Learning Activities

ERIC Educational Resources Information Center

Nkhoma, Mathews Zanda; Lam, Tri Khai; Sriratanaviriyakul, Narumon; Richardson, Joan; Kam, Booi; Lau, Kwok Hung

2017-01-01

Purpose: The purpose of this paper is to propose the use of case studies in teaching an undergraduate course of Internet for Business in class, based on the revised Bloom's taxonomy. The study provides the empirical evidence about the effect of case-based teaching method integrated the revised Bloom's taxonomy on students' incremental learning,…

Characterization of film-forming solutions and films incorporating free and nanoencapsulated tea polyphenol prepared by gelatins with different Bloom values

USDA-ARS?s Scientific Manuscript database

Gelatin film-forming solutions and their films incorporating tea polyphenol (TP) and chitosan nanoparticles (CSNs) were prepared from gelatins with different Bloom values (100, 150 and 225). Blank gelatin film-forming solutions and films were prepared as controls. Gelatins with higher Bloom values h...

Calibrating the Difficulty of an Assessment Tool: The Blooming of a Statistics Examination

ERIC Educational Resources Information Center

Dunham, Bruce; Yapa, Gaitri; Yu, Eugenia

2015-01-01

Bloom's taxonomy is proposed as a tool by which to assess the level of complexity of assessment tasks in statistics. Guidelines are provided for how to locate tasks at each level of the taxonomy, along with descriptions and examples of suggested test questions. Through the "Blooming" of an examination--that is, locating its constituent…

16 CFR 18.5 - Deception as to blooming, fruiting, or growing ability.

Code of Federal Regulations, 2010 CFR

2010-01-01

... purchasers the ability of such products: (a) To bloom, flower, or fruit within a specified period of time; or... section, when flower bulbs are of such immaturity as not reasonably to be expected to bloom and flower the... flowers, they shall be tagged or labeled so as to clearly, adequately and conspicuously disclose such fact...

16 CFR 18.5 - Deception as to blooming, fruiting, or growing ability.

Code of Federal Regulations, 2014 CFR

2014-01-01

... purchasers the ability of such products: (a) To bloom, flower, or fruit within a specified period of time; or... section, when flower bulbs are of such immaturity as not reasonably to be expected to bloom and flower the... flowers, they shall be tagged or labeled so as to clearly, adequately and conspicuously disclose such fact...

16 CFR 18.5 - Deception as to blooming, fruiting, or growing ability.

Code of Federal Regulations, 2013 CFR

2013-01-01

... purchasers the ability of such products: (a) To bloom, flower, or fruit within a specified period of time; or... section, when flower bulbs are of such immaturity as not reasonably to be expected to bloom and flower the... flowers, they shall be tagged or labeled so as to clearly, adequately and conspicuously disclose such fact...

16 CFR 18.5 - Deception as to blooming, fruiting, or growing ability.

Code of Federal Regulations, 2011 CFR

2011-01-01

... purchasers the ability of such products: (a) To bloom, flower, or fruit within a specified period of time; or... section, when flower bulbs are of such immaturity as not reasonably to be expected to bloom and flower the... flowers, they shall be tagged or labeled so as to clearly, adequately and conspicuously disclose such fact...

16 CFR 18.5 - Deception as to blooming, fruiting, or growing ability.

Code of Federal Regulations, 2012 CFR

2012-01-01

... purchasers the ability of such products: (a) To bloom, flower, or fruit within a specified period of time; or... section, when flower bulbs are of such immaturity as not reasonably to be expected to bloom and flower the... flowers, they shall be tagged or labeled so as to clearly, adequately and conspicuously disclose such fact...

Four Major South Korea's Rivers Using Deep Learning Models.

PubMed

Lee, Sangmok; Lee, Donghyun

2018-06-24

Harmful algal blooms are an annual phenomenon that cause environmental damage, economic losses, and disease outbreaks. A fundamental solution to this problem is still lacking, thus, the best option for counteracting the effects of algal blooms is to improve advance warnings (predictions). However, existing physical prediction models have difficulties setting a clear coefficient indicating the relationship between each factor when predicting algal blooms, and many variable data sources are required for the analysis. These limitations are accompanied by high time and economic costs. Meanwhile, artificial intelligence and deep learning methods have become increasingly common in scientific research; attempts to apply the long short-term memory (LSTM) model to environmental research problems are increasing because the LSTM model exhibits good performance for time-series data prediction. However, few studies have applied deep learning models or LSTM to algal bloom prediction, especially in South Korea, where algal blooms occur annually. Therefore, we employed the LSTM model for algal bloom prediction in four major rivers of South Korea. We conducted short-term (one week) predictions by employing regression analysis and deep learning techniques on a newly constructed water quality and quantity dataset drawn from 16 dammed pools on the rivers. Three deep learning models (multilayer perceptron, MLP; recurrent neural network, RNN; and long short-term memory, LSTM) were used to predict chlorophyll-a, a recognized proxy for algal activity. The results were compared to those from OLS (ordinary least square) regression analysis and actual data based on the root mean square error (RSME). The LSTM model showed the highest prediction rate for harmful algal blooms and all deep learning models out-performed the OLS regression analysis. Our results reveal the potential for predicting algal blooms using LSTM and deep learning.

Metal uptake by phytoplankton during a bloom in South San Francisco Bay: Implications for metal cycling in estuaries

USGS Publications Warehouse

Luoma, S.N.; VanGeen, A.; Lee, B.-G.; Cloern, J.E.

1998-01-01

The 1994 spring phytoplankton bloom in South San Francisco Bay caused substantial reductions in concentrations of dissolved Cd, Ni, and Zn, but not Cu. We estimate that the equivalent of ~60% of the total annual input of Cd, Ni, and Zn from local waste-water treatment plants is cycled through the phytoplankton in South Bay. The results suggest that processes that affect phytoplankton bloom frequency or intensity in estuaries (e.g. nutrient enrichment) may also affect metal trapping. The bloom was characterized by hydrographic surveys conducted at weekly intervals for 9 weeks. Metal samples were collected from the water column on three occasions, timed to bracket the period when the bloom was predicted. Factors that might confound observations of biological influences, such as freshwater inputs, were relatively constant during the study. Before the bloom, concentrations of dissolved Cd were 0.81 ?? 0.02 nmol kg-1, Zn concentrations were 19.8 ?? 1.5 nmol kg-1, Ni were 42 ?? 1.4 nmol kg-1, and Cu were 37 ?? 1.4 nmol kg-1. The values are elevated relative to riverine and coastal end-members, reflecting inputs from wastewater and(or) sediments. At the height of the bloom, dissolved Zn, Cd, and Ni were reduced to 19, 50, and 75% of their prebloom concentrations, respectively. Dissolved Cu concentrations increased 20%. The mass of Cd taken up by phytoplankton was similar to the mass of Cd removed from solution if particle settling was considered, and Cd concentrations estimated in phytoplankton were higher than concentrations in suspended particulate material (SPM). Particulate concentrations of Zn and Ni during the bloom appeared to be dominated by the influence of changes in resuspension of Zn- and Ni-rich sediments.

The influence of changes in wind patterns on the areal extension of surface cyanobacterial blooms in a large shallow lake in China.

PubMed

Wu, Tingfeng; Qin, Boqiang; Brookes, Justin D; Shi, Kun; Zhu, Guangwei; Zhu, Mengyuan; Yan, Wenming; Wang, Zhen

2015-06-15

It has been hypothesized that climate change will induce the areal extension of cyanobacterial blooms. However, this hypothesis lacks field-based observation. In the present study both long-term historical data and short-term field measurement were used to identify the importance of changes in wind patterns on the cyanobacterial bloom in Lake Taihu (China), a large, shallow, eutrophic lake located in a subtropical zone. The cyanobacterial bloom mainly composed of Microcystis spp. recurred frequently throughout the year. The regression analysis of multi-year satellite image data extracted by the Floating Algae Index revealed that both the annual mean monthly maximum cyanobacterial bloom area (MMCBA) increased year by year from 2000 to 2011, while the contemporaneous cyanobacterial biomass showed no significant change. However, the correlation analysis shows that MMCBA was negatively correlated with wind speed. Our short-term field measurements indicated that the influence of wind on surface cyanobacterial blooms is that the Chlorophyll-a (Chla) concentration is fully mixing throughout the water column when the wind speed exceed 7 m s(-1). At lower wind speeds, there was vertical stratification of Chla with high surface concentrations and an increase in bloom area. The regression analysis of wind speed indicates that the climate has changed over the last decade. Lake Taihu has become increasingly calm, with the decrease of strong wind frequency between 2000 and 2011, corresponding to the increase in the MMCBA over time. Therefore, we conclude that changes in wind patterns related to climate change have favored the increase of cyanobacterial blooms in Lake Taihu. Copyright © 2015. Published by Elsevier B.V.

Abiotic control of phytoplankton blooms in temperate coastal marine ecosystems: A case study in the South Atlantic Ocean.

PubMed

Bermejo, Paula; Helbling, E Walter; Durán-Romero, Cristina; Cabrerizo, Marco J; Villafañe, Virginia E

2018-01-15

Coastal waters of the South Atlantic Ocean (SAO) sustain one of the highest levels of production of the World's ocean, maintained by dense phytoplankton winter blooms that are dominated by large diatoms. These blooms have been associated to calm weather conditions that allow the formation of a shallow and well illuminated upper mixed layer. In Bahía Engaño, a coastal site in Patagonia, Argentina (chosen as a model coastal ecosystem) winter blooms recurrently peaked on June and they were dominated almost entirely by the microplanktonic diatom Odontella aurita. However, during the year 2015, a new wind pattern was observed - with many days of northerly high-speed winds, deviating from the calm winter days observed during a reference period (2001-2014) used for comparison. We determined that this new wind pattern was the most important factor that affected the phytoplankton dynamics, precluding the initiation of a June bloom during 2015 that instead occurred during late winter (August). Furthermore, the 2015 bloom had a higher proportion of nanoplanktonic cells (as compared to the reference period) and it was co-dominated by O. aurita and Thalassiossira spp. Other variables such as nutrient supply and incident solar radiation did not have an important role in limiting and/or initiating the June 2015 bloom, but temperature might have benefited the growth of small cells during August 2015. If these changes in the timing and/or the taxonomic composition of the bloom persist, they may have important consequences for the secondary production and economic services of the coastal SAO. Copyright © 2017 Elsevier B.V. All rights reserved.

Decoupling physical from biological processes to assess the impact of viruses on a mesoscale algal bloom.

PubMed

Lehahn, Yoav; Koren, Ilan; Schatz, Daniella; Frada, Miguel; Sheyn, Uri; Boss, Emmanuel; Efrati, Shai; Rudich, Yinon; Trainic, Miri; Sharoni, Shlomit; Laber, Christian; DiTullio, Giacomo R; Coolen, Marco J L; Martins, Ana Maria; Van Mooy, Benjamin A S; Bidle, Kay D; Vardi, Assaf

2014-09-08

Phytoplankton blooms are ephemeral events of exceptionally high primary productivity that regulate the flux of carbon across marine food webs [1-3]. Quantification of bloom turnover [4] is limited by a fundamental difficulty to decouple between physical and biological processes as observed by ocean color satellite data. This limitation hinders the quantification of bloom demise and its regulation by biological processes [5, 6], which has important consequences on the efficiency of the biological pump of carbon to the deep ocean [7-9]. Here, we address this challenge and quantify algal blooms' turnover using a combination of satellite and in situ data, which allows identification of a relatively stable oceanic patch that is subject to little mixing with its surroundings. Using a newly developed multisatellite Lagrangian diagnostic, we decouple the contributions of physical and biological processes, allowing quantification of a complete life cycle of a mesoscale (∼10-100 km) bloom of coccolithophores in the North Atlantic, from exponential growth to its rapid demise. We estimate the amount of organic carbon produced during the bloom to be in the order of 24,000 tons, of which two-thirds were turned over within 1 week. Complimentary in situ measurements of the same patch area revealed high levels of specific viruses infecting coccolithophore cells, therefore pointing at the importance of viral infection as a possible mortality agent. Application of the newly developed satellite-based approaches opens the way for large-scale quantification of the impact of diverse environmental stresses on the fate of phytoplankton blooms and derived carbon in the ocean. Copyright © 2014 Elsevier Ltd. All rights reserved.

Potential impacts of blooms of the toxic dinoflagellate Karenia brevis on the growth, survival and juvenile recruitment of the non-native green mussel Perna viridis in southeastern United States.

PubMed

McFarland, Katherine; Jean, Fred; Thébault, Julien; Volety, Aswani K

2016-01-01

Red tide blooms formed by Karenia brevis are frequent along the Gulf coast of Florida and it is unclear what tolerance the green mussel Perna viridis, a recently introduced species to coastal waters, has toward these events. Established populations of P. viridis were monitored along the coastal waters of Estero Bay, Florida before, during and following two consecutive red tide blooms to assess the potential effects on growth, survival and juvenile recruitment. Upon onset of the bloom, growth rates fell from 6 to 10 mm month(-1) (March 2011-November 2011) to less than 3 mm month(-1). In the succeeding years, K. brevis blooms were present, and average growth of individually tagged mussels remained below 3 mm month(-1). During growth monitoring the use of calcein as an internal marker was tested with positive staining results and no observed effect on growth or survival. In March 2012, following the first red tide bloom, a population-wide mortality event was observed. Following this event, increased mortality rates were observed with peaks during onset of the bloom in the fall of 2012 and 2013. Juvenile recruitment was also limited during years in which blooms persisted into the spring spawning period suggesting gamete and/or larval sensitivity to K. brevis. Although it cannot be conclusively determined that the cause of reduced growth and survival is due to red tide events, the parallels observed suggest that K. brevis is a factor in the observed changes in population structure. Copyright © 2015 Elsevier Ltd. All rights reserved.

Monitoring cyanobacterial blooms by satellite remote sensing

NASA Astrophysics Data System (ADS)

Kutser, Tiit; Metsamaa, Liisa; Strömbeck, Niklas; Vahtmäe, Ele

2006-03-01

Cyanobacterial blooms are attracting the increasing attention of environment agencies, water authorities, and human and animal health organizations, since they can present a range of amenity, water quality ant treatment problems, and hazards to human and animal health. The problem is especially acute in the Baltic Sea where cyanobacterial blooms occur every summer covering areas of more than 100 000 km 2. It has been shown that quantitative mapping of cyanobacteria during bloom conditions is possible with hyperspectral instruments. These sensors, however, cannot provide synoptic spatial coverage and high revisit times needed for near real-time monitoring of potentially harmful blooms. The aim was to estimate whether spectral resolution of multispectral sensors, which can provide needed coverage, is adequate for quantitative mapping of cyanobacteria and whether it is possible to separate potentially harmful blooms of cyanobacteria from waters dominated by algae using ocean colour satellites. The modelling results show that multispectral sensors like ALI, Landsat or MODIS are not capable of separating waters dominated by cyanobacteria from waters dominated by other algae species, as their spectral band configuration does not allow detecting absorption features caused by phycocyanin (present primarily in cyanobacteria) or any other spectral features that are characteristic to cyanobacteria only. MERIS bands 6 and 7 allow detecting phycocyanin absorption feature near 630 nm and a small peak in reflectance spectra near 650 nm characteristic to only cyanobacteria. Thus, MERIS can be used in detecting cyanobacteria if they are present in relatively high quantities. Unfortunately it is not possible to use MERIS for early warning of emerging potentially harmful blooms as the minimum biomass needed to cause features in reflectance spectra typical to cyanobacteria is higher than the biomass already considered as a bloom in the Baltic Sea.

Taxa-specific eco-sensitivity in relation to phytoplankton bloom stability and ecologically relevant lake state

NASA Astrophysics Data System (ADS)

Napiórkowska-Krzebietke, Agnieszka; Dunalska, Julita A.; Zębek, Elżbieta

2017-05-01

Phytoplankton (including plant-like, animal-like algae and Cyanobacteria) blooms have recently become a serious global threat to the sustenance of ecosystems, to human and animal health and to economy. This study focused on the composition and stability of blooms as well as their taxa-specific ecological sensitivity to the main causal factors (especially phosphorus and nitrogen) in degraded urban lakes. The analyzed lakes were assessed with respect to the trophic state as well as ecological status. Total phytoplankton biomass (ranging from 1.5 to 181.3 mg dm-3) was typical of blooms of different intensity, which can appear during a whole growing season but are the most severe in early or late summer. Our results suggested that steady-state and non-steady-state bloom assemblages including mono-, bi- and multi-species or heterogeneous blooms may occur in urban lakes. The most intense blooms were formed by the genera of Cyanobacteria: Microcystis, Limnothrix, Pseudanabaena, Planktothrix, Bacillariophyta: Cyclotella and Dinophyta mainly Ceratium and Peridinium. Considering the sensitivity of phytoplankton assemblages, a new eco-sensitivity factor was proposed (E-SF), based on the concept of Phytoplankton Trophic Index composed of trophic scores of phytoplankton taxa along the eutrophication gradient. The E-SF values of 0.5, 1.3, 6.7 and 15.1 were recognized in lakes having a high, good, moderate or poor ecological status, respectively. For lake restoration, each type of bloom should be considered separately because of different sensitivities of taxa and relationships with environmental variables. Proper recognition of the taxa-specific response to abiotic (especially to N and P enrichment) and biotic factors could have significant implications for further water protection and management.

Spatio-Temporal Interdependence of Bacteria and Phytoplankton during a Baltic Sea Spring Bloom

PubMed Central

Bunse, Carina; Bertos-Fortis, Mireia; Sassenhagen, Ingrid; Sildever, Sirje; Sjöqvist, Conny; Godhe, Anna; Gross, Susanna; Kremp, Anke; Lips, Inga; Lundholm, Nina; Rengefors, Karin; Sefbom, Josefin; Pinhassi, Jarone; Legrand, Catherine

2016-01-01

In temperate systems, phytoplankton spring blooms deplete inorganic nutrients and are major sources of organic matter for the microbial loop. In response to phytoplankton exudates and environmental factors, heterotrophic microbial communities are highly dynamic and change their abundance and composition both on spatial and temporal scales. Yet, most of our understanding about these processes comes from laboratory model organism studies, mesocosm experiments or single temporal transects. Spatial-temporal studies examining interactions of phytoplankton blooms and bacterioplankton community composition and function, though being highly informative, are scarce. In this study, pelagic microbial community dynamics (bacteria and phytoplankton) and environmental variables were monitored during a spring bloom across the Baltic Proper (two cruises between North Germany to Gulf of Finland). To test to what extent bacterioplankton community composition relates to the spring bloom, we used next generation amplicon sequencing of the 16S rRNA gene, phytoplankton diversity analysis based on microscopy counts and population genotyping of the dominating diatom Skeletonema marinoi. Several phytoplankton bloom related and environmental variables were identified to influence bacterial community composition. Members of Bacteroidetes and Alphaproteobacteria dominated the bacterial community composition but the bacterial groups showed no apparent correlation with direct bloom related variables. The less abundant bacterial phyla Actinobacteria, Planctomycetes, and Verrucomicrobia, on the other hand, were strongly associated with phytoplankton biomass, diatom:dinoflagellate ratio, and colored dissolved organic matter (cDOM). Many bacterial operational taxonomic units (OTUs) showed high niche specificities. For example, particular Bacteroidetes OTUs were associated with two distinct genetic clusters of S. marinoi. Our study revealed the complexity of interactions of bacterial taxa with inter- and intraspecific genetic variation in phytoplankton. Overall, our findings imply that biotic and abiotic factors during spring bloom influence bacterial community dynamics in a hierarchical manner. PMID:27148206

A winter dinoflagellate bloom drives high rates of primary production in a Patagonian fjord ecosystem

NASA Astrophysics Data System (ADS)

Montero, P.; Pérez-Santos, I.; Daneri, G.; Gutiérrez, M. H.; Igor, G.; Seguel, R.; Purdie, D.; Crawford, D. W.

2017-12-01

A dense winter bloom of the dinoflagellate Heterocapsa triquetra was observed at a fixed station (44°35.3‧S; 72°43.6‧W) in the Puyuhuapi Fjord in Chilean Patagonia during July 2015. H. triquetra dominated the phytoplankton community in the surface waters between 2 and 15 m (13-58 × 109 cell m-2), with abundances some 3 to 15 times higher than the total abundance of the diatom assemblage, which was dominated by Skeletonema spp. The high abundance of dinoflagellates was reflected in high rates of gross primary production (GPP; 0.6-1.6 g C m-2 d-1) and chlorophyll-a concentration (Chl-a; 70-199.2 mg m-2) that are comparable to levels reported in spring diatom blooms in similar Patagonian fjords. We identify the main forcing factors behind a pulse of organic matter production during the non-productive winter season, and test the hypothesis that low irradiance levels are a key factor limiting phytoplankton blooms and subsequent productivity during winter. Principal Component Analysis (PCA) indicated that GPP rates were significantly correlated (r = -0.8, p < 0.05) with a decrease in salinity/temperature and the presence of the Heterocapsa bloom. The bloom occurred under low surface irradiance levels characteristic of austral winter and was accompanied by strong northern winds, associated with the passage of a low-pressure system, and a water column dominated by double diffusive layering. To our knowledge, this is the first report of a dense dinoflagellate bloom during deep austral winter in a Patagonian fjord, and our data challenge the paradigm of light limitation as a factor controlling phytoplankton blooms in this region in winter.

Drivers and effects of Karenia mikimotoi blooms in the western English Channel

NASA Astrophysics Data System (ADS)

Barnes, Morvan K.; Tilstone, Gavin H.; Smyth, Timothy J.; Widdicombe, Claire E.; Gloël, Johanna; Robinson, Carol; Kaiser, Jan; Suggett, David J.

2015-09-01

Naturally occurring red tides and harmful algal blooms (HABs) are of increasing importance in the coastal environment and can have dramatic effects on coastal benthic and epipelagic communities worldwide. Such blooms are often unpredictable, irregular or of short duration, and thus determining the underlying driving factors is problematic. The dinoflagellate Karenia mikimotoi is an HAB, commonly found in the western English Channel and thought to be responsible for occasional mass finfish and benthic mortalities. We analysed a 19-year coastal time series of phytoplankton biomass to examine the seasonality and interannual variability of K. mikimotoi in the western English Channel and determine both the primary environmental drivers of these blooms as well as the effects on phytoplankton productivity and oxygen conditions. We observed high variability in timing and magnitude of K. mikimotoi blooms, with abundances reaching >1000 cells mL-1 at 10 m depth, inducing up to a 12-fold increase in the phytoplankton carbon content of the water column. No long-term trends in the timing or magnitude of K. mikimotoi abundance were evident from the data. Key driving factors were identified as persistent summertime rainfall and the resultant input of low-salinity high-nutrient river water. The largest bloom in 2009 was associated with highest annual primary production and led to considerable oxygen depletion at depth, most likely as a result of enhanced biological breakdown of bloom material; however, this oxygen depletion may not affect zooplankton. Our data suggests that K. mikimotoi blooms are not only a key and consistent feature of western English Channel productivity, but importantly can potentially be predicted from knowledge of rainfall or river discharge.

Patterns of Genetic Diversity and Co-Existence in Open Ocean Diatoms: the Effects of Water Mass Structure, Selection and Sex

NASA Astrophysics Data System (ADS)

Rynearson, T. A.; Chen, G.

2016-02-01

The open ocean North Atlantic spring bloom influences regional ecology and global biogeochemistry. Diatoms dominate the peak of the bloom and significantly impact productivity and export of organic carbon from the bloom. Despite their key role in a yearly event with global impacts, the genetic diversity and population structure of diatoms that comprise this open ocean bloom are unknown. Here we investigated the population genetics of the diatom Thalassiosira gravida sampled during the 2008 North Atlantic Bloom Experiment using newly-developed microsatellite markers. Here, we show that the genetic diversity of open ocean diatoms is high and that their population structure differs dramatically from coastal diatoms. High levels of genetic diversity were observed across all water samples and did not change during the bloom. Four genetically distinct populations were identified but were not associated with different water masses, depths or time points during the bloom. Instead, all four populations co-existed within samples, spanning different water masses, stages of the bloom and depths of over >300 m. The pattern of genetically distinct, co-existing populations in the open ocean contrasts dramatically with coastal habitats, where distinct populations have not been observed to co-exist at the same time and place. It is likely that populations originate via transport from disparate locations combined with overwintering capacity in the water column or sediments. The pattern of co-existence suggests that the open ocean may serve as a gene pool that harbors different populations that are then available for selection to act upon, which may contribute to the ecological and biogeochemical success of diatoms and influence their long-term evolutionary survival.

Variability in the mechanisms controlling Southern Ocean phytoplankton bloom phenology in an ocean model and satellite observations

NASA Astrophysics Data System (ADS)

Rohr, Tyler; Long, Matthew C.; Kavanaugh, Maria T.; Lindsay, Keith; Doney, Scott C.

2017-05-01

A coupled global numerical simulation (conducted with the Community Earth System Model) is used in conjunction with satellite remote sensing observations to examine the role of top-down (grazing pressure) and bottom-up (light, nutrients) controls on marine phytoplankton bloom dynamics in the Southern Ocean. Phytoplankton seasonal phenology is evaluated in the context of the recently proposed "disturbance-recovery" hypothesis relative to more traditional, exclusively "bottom-up" frameworks. All blooms occur when phytoplankton division rates exceed loss rates to permit sustained net population growth; however, the nature of this decoupling period varies regionally in Community Earth System Model. Regional case studies illustrate how unique pathways allow blooms to emerge despite very poor division rates or very strong grazing rates. In the Subantarctic, southeast Pacific small spring blooms initiate early cooccurring with deep mixing and low division rates, consistent with the disturbance-recovery hypothesis. Similar systematics are present in the Subantarctic, southwest Atlantic during the spring but are eclipsed by a subsequent, larger summer bloom that is coincident with shallow mixing and the annual maximum in division rates, consistent with a bottom-up, light limited framework. In the model simulation, increased iron stress prevents a similar summer bloom in the southeast Pacific. In the simulated Antarctic zone (70°S-65°S) seasonal sea ice acts as a dominant phytoplankton-zooplankton decoupling agent, triggering a delayed but substantial bloom as ice recedes. Satellite ocean color remote sensing and ocean physical reanalysis products do not precisely match model-predicted phenology, but observed patterns do indicate regional variability in mechanism across the Atlantic and Pacific.

Differential response of coral communities to Caulerpa spp. bloom in the reefs of Indian Ocean.

PubMed

Manikandan, B; Ravindran, J

2017-02-01

Coral reef ecosystems are disturbed in tandem by climatic and anthropogenic stressors. A number of factors act synergistically to reduce the live coral cover and threaten the existence of reefs. Continuous monitoring of the coral communities during 2012-2014 captured an unprecedented growth of macroalgae as a bloom at Gulf of Mannar (GoM) and Palk Bay (PB) which are protected and unprotected reefs, respectively. The two reefs varying in their protection level enabled to conduct an assessment on the response of coral communities and their recovery potential during and after the macroalgal bloom. Surveys in 2012 revealed a live coral cover of 36.8 and 14.6% in GoM and PB, respectively. Live coral cover was lost at an annual rate of 4% in PB due to the Caulerpa racemosa blooms that occurred in 2013 and 2014. In GoM, the loss of live coral cover was estimated to be 16.5% due to C. taxifolia bloom in 2013. Tissue regeneration by the foliose and branching coral morphotypes aided the recovery of live coral cover in GoM, whereas the chances for the recovery of live coral cover in PB reef were low, primarily due to frequent algal blooms, and the existing live coral cover was mainly due to the abundance of slow-growing massive corals. In combination, results of this study suggested that the recovery of a coral reef after a macroalgal bloom largely depends on coral species composition and the frequency of stress events. A further study linking macroalgal bloom to its specific cause is essential for the successful intervention and management.

Physical and Biogeochemical Controls of the Phytoplankton Blooms in North Western Mediterranean Sea: A Multiplatform Approach Over a Complete Annual Cycle (2012-2013 DEWEX Experiment)

NASA Astrophysics Data System (ADS)

Mayot, Nicolas; D'Ortenzio, Fabrizio; Taillandier, Vincent; Prieur, Louis; de Fommervault, Orens Pasqueron; Claustre, Hervé; Bosse, Anthony; Testor, Pierre; Conan, Pascal

2017-12-01

The North Western Mediterranean Sea exhibits recurrent and significant autumnal and spring phytoplankton blooms. The existence of these two blooms coincides with typical temperate dynamics. To determine the potential control of physical and biogeochemical factors on these phytoplankton blooms, data from a multiplatform approach (combining ships, Argo and BGC-Argo floats, and bio-optical gliders) were analyzed in association with satellite observations in 2012-2013. The satellite framework allowed a simultaneous analysis over the whole annual cycle of in situ observations of mixed layer depth, photosynthetical available radiation, particle backscattering, nutrients (nitrate and silicate), and chlorophyll-a concentrations. During the year 2012-2013, satellite ocean color observations, confirmed by in situ data, have revealed the existence of two areas (or bioregions) with comparable autumnal blooms but contrasting spring blooms. In both bioregions, the ratio of the euphotic zone (defined as the isolume 0.415 mol photons m-2 d-1, Z0.415) and the MLD identified the initiation of the autumnal bloom, as well as the maximal annual increase in [Chl-a] in spring. In fact, the autumnal phytoplankton bloom might be initiated by mixing of the summer shallowing deep chlorophyll maximum, while the spring restratification (when Z0.415/MLD ratio became >1) might induce surface phytoplankton production that largely overcomes the losses. Finally, winter deep convection events that took place in one of the bioregions induced higher net accumulation rate of phytoplankton in spring associated with a diatom-dominated phytoplankton community principally. We suggest that very deep winter MLD lead to an increase in surface silicates availability, which favored the development of diatoms.

Assimilation of Diazotrophic Nitrogen into Pelagic Food Webs

PubMed Central

Woodland, Ryan J.; Holland, Daryl P.; Beardall, John; Smith, Jonathan; Scicluna, Todd; Cook, Perran L. M.

2013-01-01

The fate of diazotrophic nitrogen (ND) fixed by planktonic cyanobacteria in pelagic food webs remains unresolved, particularly for toxic cyanophytes that are selectively avoided by most herbivorous zooplankton. Current theory suggests that ND fixed during cyanobacterial blooms can enter planktonic food webs contemporaneously with peak bloom biomass via direct grazing of zooplankton on cyanobacteria or via the uptake of bioavailable ND (exuded from viable cyanobacterial cells) by palatable phytoplankton or microbial consortia. Alternatively, ND can enter planktonic food webs post-bloom following the remineralization of bloom detritus. Although the relative contribution of these processes to planktonic nutrient cycles is unknown, we hypothesized that assimilation of bioavailable ND (e.g., nitrate, ammonium) by palatable phytoplankton and subsequent grazing by zooplankton (either during or after the cyanobacterial bloom) would be the primary pathway by which ND was incorporated into the planktonic food web. Instead, in situ stable isotope measurements and grazing experiments clearly documented that the assimilation of ND by zooplankton outpaced assimilation by palatable phytoplankton during a bloom of toxic Nodularia spumigena Mertens. We identified two distinct temporal phases in the trophic transfer of ND from N. spumigena to the plankton community. The first phase was a highly dynamic transfer of ND to zooplankton with rates that covaried with bloom biomass while bypassing other phytoplankton taxa; a trophic transfer that we infer was routed through bloom-associated bacteria. The second phase was a slowly accelerating assimilation of the dissolved-ND pool by phytoplankton that was decoupled from contemporaneous variability in N. spumigena concentrations. These findings provide empirical evidence that ND can be assimilated and transferred rapidly throughout natural plankton communities and yield insights into the specific processes underlying the propagation of ND through pelagic food webs. PMID:23840744

Assimilation of diazotrophic nitrogen into pelagic food webs.

PubMed

Woodland, Ryan J; Holland, Daryl P; Beardall, John; Smith, Jonathan; Scicluna, Todd; Cook, Perran L M

2013-01-01

The fate of diazotrophic nitrogen (N(D)) fixed by planktonic cyanobacteria in pelagic food webs remains unresolved, particularly for toxic cyanophytes that are selectively avoided by most herbivorous zooplankton. Current theory suggests that N(D) fixed during cyanobacterial blooms can enter planktonic food webs contemporaneously with peak bloom biomass via direct grazing of zooplankton on cyanobacteria or via the uptake of bioavailable N(D) (exuded from viable cyanobacterial cells) by palatable phytoplankton or microbial consortia. Alternatively, N(D) can enter planktonic food webs post-bloom following the remineralization of bloom detritus. Although the relative contribution of these processes to planktonic nutrient cycles is unknown, we hypothesized that assimilation of bioavailable N(D) (e.g., nitrate, ammonium) by palatable phytoplankton and subsequent grazing by zooplankton (either during or after the cyanobacterial bloom) would be the primary pathway by which N(D) was incorporated into the planktonic food web. Instead, in situ stable isotope measurements and grazing experiments clearly documented that the assimilation of N(D) by zooplankton outpaced assimilation by palatable phytoplankton during a bloom of toxic Nodularia spumigena Mertens. We identified two distinct temporal phases in the trophic transfer of N(D) from N. spumigena to the plankton community. The first phase was a highly dynamic transfer of N(D) to zooplankton with rates that covaried with bloom biomass while bypassing other phytoplankton taxa; a trophic transfer that we infer was routed through bloom-associated bacteria. The second phase was a slowly accelerating assimilation of the dissolved-N(D) pool by phytoplankton that was decoupled from contemporaneous variability in N. spumigena concentrations. These findings provide empirical evidence that N(D) can be assimilated and transferred rapidly throughout natural plankton communities and yield insights into the specific processes underlying the propagation of N(D) through pelagic food webs.

Aggregation and Association of NDVI, Boll Injury, and Stink Bugs in North Carolina Cotton.

PubMed

Reisig, Dominic D; Reay-Jones, F P F; Meijer, A D

2015-01-01

Sampling of herbivorous stink bugs in southeastern U.S. cotton remains problematic. Remote sensing was explored to improve sampling of these pests and associated boll injury. Two adjacent 14.5-ha cotton fields were grid sampled in 2011 and 2012 by collecting stink bug adults and bolls every week during the third, fourth, and fifth weeks of bloom. Satellite remote sensing data were collected during the third week of bloom during both years, and normalized difference vegetation index (NDVI) values were calculated. Stink bugs were spatially aggregated on the third week of bloom in 2011. Boll injury from stink bugs was spatially aggregated during the fourth week of bloom in 2012. The NDVI values were aggregated during both years. There was a positive association and correlation between stink bug numbers and NDVI values, as well as injured bolls and NDVI values, during the third week of bloom in 2011. During the third week of bloom in 2012, NDVI values were negatively correlated with stink bug numbers. During the fourth week of bloom in 2011, stink bug numbers and boll injury were both positively associated and correlated with NDVI values. During the fourth week of bloom in 2012, stink bugs were negatively correlated with NDVI values, and boll injury was negatively associated and correlated with NDVI values. This study suggests the potential of remote sensing as a tool to assist with sampling stink bugs in cotton, although more research is needed using NDVI and other plant measurements to predict stink bug injury. © The Author 2015. Published by Oxford University Press on behalf of the Entomological Society of America.

From Research to Operations: Transitioning Noaa's Lake Erie Harmful Algal Bloom Forecast System

NASA Astrophysics Data System (ADS)

Kavanaugh, K. E.; Stumpf, R. P.

2016-02-01

A key priority of NOAA's Harmful Algal Bloom Operational Forecast System (HAB-OFS) is to leverage the Ecological Forecasting Roadmap to systematically transition to operations scientifically mature HAB forecasts in regions of the country where there is a strong user need identified and an operational framework can be supported. While in the demonstration phase, the Lake Erie HAB forecast has proven its utility. Over the next two years, NOAA will be transitioning the Lake Erie HAB forecast to operations with an initial operating capability established in the HAB OFS' operational infrastructure by the 2016 bloom season. Blooms of cyanobacteria are a recurring problem in Lake Erie, and the dominant bloom forming species, Microcystis aeruginosa, produces a toxin called microcystin that is poisonous to humans, livestock and pets. Once the toxins have contaminated the source water used for drinking water, it is costly for public water suppliers to remove them. As part of the Lake Erie HAB forecast demonstration, NOAA has provided information regarding the cyanobacterial blooms in a biweekly Experimental HAB Bulletin, which includes information about the current and forecasted distribution, toxicity, potential for vertical mixing or scum formation, mixing of the water column, and predictions of bloom decline. Coastal resource managers, public water suppliers and public health officials use the Experimental HAB Bulletins to respond to and mitigate the impacts of cyanobacterial blooms. The transition to operations will benefit stakeholders through ensuring that future Lake Erie HAB forecast products are sustained, systematic, reliable, and robust. Once operational, the forecasts will continue to be assessed and improvements will be made based on the results of emerging scientific research. In addition, the lessons learned from the Lake Erie transition will be used to streamline the process for future HAB forecasts presently in development.

Status, Alert System, and Prediction of Cyanobacterial Bloom in South Korea

PubMed Central

Srivastava, Ankita; Ahn, Chi-Yong; Asthana, Ravi Kumar; Lee, Hyung-Gwan; Oh, Hee-Mock

2015-01-01

Bloom-forming freshwater cyanobacterial genera pose a major ecological problem due to their ability to produce toxins and other bioactive compounds, which can have important implications in illnesses of humans and livestock. Cyanobacteria such as Microcystis, Anabaena, Oscillatoria, Phormidium, and Aphanizomenon species producing microcystins and anatoxin-a have been predominantly documented from most South Korean lakes and reservoirs. With the increase in frequency of such blooms, various monitoring approaches, treatment processes, and prediction models have been developed in due course. In this paper we review the field studies and current knowledge on toxin producing cyanobacterial species and ecological variables that regulate toxin production and bloom formation in major rivers (Han, Geum, Nakdong, and Yeongsan) and reservoirs in South Korea. In addition, development of new, fast, and high-throughput techniques for effective monitoring is also discussed with cyanobacterial bloom advisory practices, current management strategies, and their implications in South Korean freshwater bodies. PMID:25705675

Extreme Algal Bloom Detection with MERIS

NASA Astrophysics Data System (ADS)

Amin, R.; Gilerson, A.; Gould, R.; Arnone, R.; Ahmed, S.

2009-05-01

Harmful Algal Blooms (HAB's) are a major concern all over the world due to their negative impacts on the marine environment, human health, and the economy. Their detection from space still remains a challenge particularly in turbid coastal waters. In this study we propose a simple reflectance band difference approach for use with Medium Resolution Imaging Spectrometer (MERIS) data to detect intense plankton blooms. For convenience we label this approach as the Extreme Bloom Index (EBI) which is defined as EBI = Rrs (709) - Rrs (665). Our initial analysis shows that this band difference approach has some advantages over the band ratio approaches, particularly in reducing errors due to imperfect atmospheric corrections. We also do a comparison between the proposed EBI technique and the Maximum Chlorophyll Index (MCI) Gower technique. Our preliminary result shows that both the EBI and MCI indeces detect intense plankton blooms, however, MCI is more vulnerable in highly scattering waters, giving more positive false alarms than EBI.

The structure and toxicity of winter cyanobacterial bloom in a eutrophic lake of the temperate zone.

PubMed

Wejnerowski, Łukasz; Rzymski, Piotr; Kokociński, Mikołaj; Meriluoto, Jussi

2018-06-22

Winter cyanobacterial blooms have become increasingly common in eutrophic lakes advocating a need for their monitoring and risk assessment. The present study evaluated the toxicity of a winter cyanobacterial bloom in a eutrophicated freshwater lake located in Western Poland. The bloom was dominated by potentially toxic species: Planktothrix agardhii, Limnothrix redekei, and Aphanizomenon gracile. The toxin analysis revealed the presence of demethylated forms of microcystin-RR and microcystin-LR in ranges of 24.6-28.7 and 6.6-7.6 µg/L, respectively. The toxicity of sampled water was further evaluated in platelet-rich plasma isolated from healthy human subjects using lipid peroxidation and lactate dehydrogenase assays. No significant adverse effects were observed. The present study demonstrates that toxicity of some winter cyanobacterial blooms in the temperate zone, like that in Lubosińskie Lake, may not exhibit significant health risks despite microcystin production.

A rare and extensive summer bloom enhanced by ocean eddies in the oligotrophic western North Pacific Subtropical Gyre.

PubMed

Chow, Chun Hoe; Cheah, Wee; Tai, Jen-Hua

2017-07-24

The North Pacific Subtropical Gyre (NPSG) is the largest ecosystem on Earth, and it plays a critical role in global ocean productivity and carbon cycling. Here, we report a rare and striking ~2000-km-long phytoplankton bloom that lasted over one month in the western part of the NPSG in summer 2003. The bloom resulted from the co-occurrence of a northward-shifted North Equatorial Current (NEC) supplying additional phosphate, and strong eddy activity that fueled productivity and spread chlorophyll mainly through horizontal stirring. The extensive one-month bloom had a maximum Chl concentration of six times the summer mean value and collectively fixed an additional five teragrams (5 × 10 12  g) of carbon above the summer average. An increase in the pCO 2 during the bloom suggests that most of the additionally fixed carbon was rapidly consumed.

An Evaluative Calculus Project: Applying Bloom's Taxonomy to the Calculus Classroom

ERIC Educational Resources Information Center

Karaali, Gizem

2011-01-01

In education theory, Bloom's taxonomy is a well-known paradigm to describe domains of learning and levels of competency. In this article I propose a calculus capstone project that is meant to utilize the sixth and arguably the highest level in the cognitive domain, according to Bloom et al.: evaluation. Although one may assume that mathematics is…

Monitoring Bloom Dynamics of a Common Coastal Bioluminescent Ctenophore

DTIC Science & Technology

2009-09-30

potential in the coastal zone environment. OBJECTIVES Blooms of bioluminescent jellyfish , especially of Mnemiopsis leidyi, are a common occurrence... jellyfish populations are done with net collections by hand at stations weekly, monthly, or seasonally. These time scales severely limit our knowledge...the collection of both biotic and abiotic data continuously. 5 IMPACT/APPLICATIONS As incidents of jellyfish blooms, especially Mnemiopsis

4. INTERIOR OF ENGINE ROOM, CONTAINING UNITEDTOD TWINTANDEM ENGINE, FOR ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

4. INTERIOR OF ENGINE ROOM, CONTAINING UNITED-TOD TWIN-TANDEM ENGINE, FOR 40" BLOOMING MILL; AS SEEN FROM THE UPPER LEVEL BRIDGE CRANE, THIS ENGINE WAS THE DIRECT DRIVE TO THE 40" BLOOMING MILL LOCATED IN THE ADJACENT ROOM TO THE LEFT. THE UNITED-TOD ENGINE, A TWIN TANDEM COMPOUND STEAM ENGINE, WAS RATED AT 20,000 MP. IN 1946 NEW HIGH PRESSURE CYLINDERS WERE INSTALLED AND THE ENGINE RAN ON 200 PSI STEAM, WITH A 44"X76"X60" STROKE, TO A BUILT-UP COUNTER-BALANCED CENTER CRANK. - Republic Iron & Steel Company, Youngstown Works, Blooming Mill & Blooming Mill Engines, North of Poland Avenue, Youngstown, Mahoning County, OH

Optical researches for cyanobacteria bloom monitoring in Curonian Lagoon

NASA Astrophysics Data System (ADS)

Shirshin, Evgeny A.; Budylin, Gleb B.; Yakimov, Boris P.; Voloshina, Olga V.; Karabashev, Genrik S.; Evdoshenko, Marina A.; Fadeev, Victor V.

2016-04-01

Cyanobacteria bloom is a great ecological problem of Curonian Lagoon and Baltic Sea. The development of novel methods for the on-line control of cyanobacteria concentration and, moreover, for prediction of bloom spreading is of interest for monitoring the state of ecosystem. Here, we report the results of the joint application of hyperspectral measurements and remote sensing of Curonian Lagoon in July 2015 aimed at the assessment of cyanobacteria communities. We show that hyperspectral data allow on-line detection and qualitative estimation of cyanobacteria concentration, while the remote sensing data indicate the possibility of cyanobacteria bloom detection using the spectral features of upwelling irradiation.

Internal ecosystem feedbacks enhance nitrogen-fixing cyanobacteria blooms and complicate management in the Baltic Sea.

PubMed

Vahtera, Emil; Conley, Daniel J; Gustafsson, Bo G; Kuosa, Harri; Pitkänen, Heikki; Savchuk, Oleg P; Tamminen, Timo; Viitasalo, Markku; Voss, Maren; Wasmund, Norbert; Wulff, Fredrik

2007-04-01

Eutrophication of the Baltic Sea has potentially increased the frequency and magnitude of cyanobacteria blooms. Eutrophication leads to increased sedimentation of organic material, increasing the extent of anoxic bottoms and subsequently increasing the internal phosphorus loading. In addition, the hypoxic water volume displays a negative relationship with the total dissolved inorganic nitrogen pool, suggesting greater overall nitrogen removal with increased hypoxia. Enhanced internal loading of phosphorus and the removal of dissolved inorganic nitrogen leads to lower nitrogen to phosphorus ratios, which are one of the main factors promoting nitrogenfixing cyanobacteria blooms. Because cyanobacteria blooms in the open waters of the Baltic Sea seem to be strongly regulated by internal processes, the effects of external nutrient reductions are scale-dependent. During longer time scales, reductions in external phosphorus load may reduce cyanobacteria blooms; however, on shorter time scales the internal phosphorus loading can counteract external phosphorus reductions. The coupled processes inducing internal loading, nitrogen removal, and the prevalence of nitrogen-fixing cyanobacteria can qualitatively be described as a potentially self-sustaining "vicious circle." To effectively reduce cyanobacteria blooms and overall signs of eutrophication, reductions in both nitrogen and phosphorus external loads appear essential.