Science.gov

Sample records for quality tetrahedral meshes

  1. Mesh quality control for multiply-refined tetrahedral grids

    NASA Technical Reports Server (NTRS)

    Biswas, Rupak; Strawn, Roger

    1994-01-01

    A new algorithm for controlling the quality of multiply-refined tetrahedral meshes is presented in this paper. The basic dynamic mesh adaption procedure allows localized grid refinement and coarsening to efficiently capture aerodynamic flow features in computational fluid dynamics problems; however, repeated application of the procedure may significantly deteriorate the quality of the mesh. Results presented show the effectiveness of this mesh quality algorithm and its potential in the area of helicopter aerodynamics and acoustics.

  2. Tetrahedral and Hexahedral Mesh Adaptation for CFD Problems

    NASA Technical Reports Server (NTRS)

    Biswas, Rupak; Strawn, Roger C.; Chancellor, Marisa K. (Technical Monitor)

    1997-01-01

    This paper presents two unstructured mesh adaptation schemes for problems in computational fluid dynamics. The procedures allow localized grid refinement and coarsening to efficiently capture aerodynamic flow features of interest. The first procedure is for purely tetrahedral grids; unfortunately, repeated anisotropic adaptation may significantly deteriorate the quality of the mesh. Hexahedral elements, on the other hand, can be subdivided anisotropically without mesh quality problems. Furthermore, hexahedral meshes yield more accurate solutions than their tetrahedral counterparts for the same number of edges. Both the tetrahedral and hexahedral mesh adaptation procedures use edge-based data structures that facilitate efficient subdivision by allowing individual edges to be marked for refinement or coarsening. However, for hexahedral adaptation, pyramids, prisms, and tetrahedra are used as buffer elements between refined and unrefined regions to eliminate hanging vertices. Computational results indicate that the hexahedral adaptation procedure is a viable alternative to adaptive tetrahedral schemes.

  3. Details of tetrahedral anisotropic mesh adaptation

    NASA Astrophysics Data System (ADS)

    Jensen, Kristian Ejlebjerg; Gorman, Gerard

    2016-04-01

    We have implemented tetrahedral anisotropic mesh adaptation using the local operations of coarsening, swapping, refinement and smoothing in MATLAB without the use of any for- N loops, i.e. the script is fully vectorised. In the process of doing so, we have made three observations related to details of the implementation: 1. restricting refinement to a single edge split per element not only simplifies the code, it also improves mesh quality, 2. face to edge swapping is unnecessary, and 3. optimising for the Vassilevski functional tends to give a little higher value for the mean condition number functional than optimising for the condition number functional directly. These observations have been made for a uniform and a radial shock metric field, both starting from a structured mesh in a cube. Finally, we compare two coarsening techniques and demonstrate the importance of applying smoothing in the mesh adaptation loop. The results pertain to a unit cube geometry, but we also show the effect of corners and edges by applying the implementation in a spherical geometry.

  4. A comparison of tetrahedral mesh improvement techniques

    SciTech Connect

    Freitag, L.A.; Ollivier-Gooch, C.

    1996-12-01

    Automatic mesh generation and adaptive refinement methods for complex three-dimensional domains have proven to be very successful tools for the efficient solution of complex applications problems. These methods can, however, produce poorly shaped elements that cause the numerical solution to be less accurate and more difficult to compute. Fortunately, the shape of the elements can be improved through several mechanisms, including face-swapping techniques that change local connectivity and optimization-based mesh smoothing methods that adjust grid point location. The authors consider several criteria for each of these two methods and compare the quality of several meshes obtained by using different combinations of swapping and smoothing. Computational experiments show that swapping is critical to the improvement of general mesh quality and that optimization-based smoothing is highly effective in eliminating very small and very large angles. The highest quality meshes are obtained by using a combination of swapping and smoothing techniques.

  5. Novel biomedical tetrahedral mesh methods: algorithms and applications

    NASA Astrophysics Data System (ADS)

    Yu, Xiao; Jin, Yanfeng; Chen, Weitao; Huang, Pengfei; Gu, Lixu

    2007-12-01

    Tetrahedral mesh generation algorithm, as a prerequisite of many soft tissue simulation methods, becomes very important in the virtual surgery programs because of the real-time requirement. Aiming to speed up the computation in the simulation, we propose a revised Delaunay algorithm which makes a good balance of quality of tetrahedra, boundary preservation and time complexity, with many improved methods. Another mesh algorithm named Space-Disassembling is also presented in this paper, and a comparison of Space-Disassembling, traditional Delaunay algorithm and the revised Delaunay algorithm is processed based on clinical soft-tissue simulation projects, including craniofacial plastic surgery and breast reconstruction plastic surgery.

  6. Practical implementation of tetrahedral mesh reconstruction in emission tomography

    NASA Astrophysics Data System (ADS)

    Boutchko, R.; Sitek, A.; Gullberg, G. T.

    2013-05-01

    projection datasets. The results demonstrate that the reconstructed images represented as tetrahedral meshes based on point clouds offer image quality comparable to that achievable using a standard voxel grid while allowing substantial reduction in the number of unknown intensities to be reconstructed and reducing the noise.

  7. Practical implementation of tetrahedral mesh reconstruction in emission tomography.

    PubMed

    Boutchko, R; Sitek, A; Gullberg, G T

    2013-05-07

    projection datasets. The results demonstrate that the reconstructed images represented as tetrahedral meshes based on point clouds offer image quality comparable to that achievable using a standard voxel grid while allowing substantial reduction in the number of unknown intensities to be reconstructed and reducing the noise.

  8. Streaming Compression of Tetrahedral Volume Meshes

    SciTech Connect

    Isenburg, M; Lindstrom, P; Gumhold, S; Shewchuk, J

    2005-11-21

    Geometry processing algorithms have traditionally assumed that the input data is entirely in main memory and available for random access. This assumption does not scale to large data sets, as exhausting the physical memory typically leads to IO-inefficient thrashing. Recent works advocate processing geometry in a 'streaming' manner, where computation and output begin as soon as possible. Streaming is suitable for tasks that require only local neighbor information and batch process an entire data set. We describe a streaming compression scheme for tetrahedral volume meshes that encodes vertices and tetrahedra in the order they are written. To keep the memory footprint low, the compressor is informed when vertices are referenced for the last time (i.e. are finalized). The compression achieved depends on how coherent the input order is and how many tetrahedra are buffered for local reordering. For reasonably coherent orderings and a buffer of 10,000 tetrahedra, we achieve compression rates that are only 25 to 40 percent above the state-of-the-art, while requiring drastically less memory resources and less than half the processing time.

  9. Implementation of tetrahedral-mesh geometry in Monte Carlo radiation transport code PHITS.

    PubMed

    Furuta, Takuya; Sato, Tatsuhiko; Han, Min; Yeom, Yeon; Kim, Chan; Brown, Justin; Bolch, Wesley

    2017-04-04

    A new function to treat tetrahedral-mesh geometry was implemented in the Particle and Heavy Ion Transport code Systems (PHITS). To accelerate the computational speed in the transport process, an original algorithm was introduced to initially prepare decomposition maps for the container box of the tetrahedral-mesh geometry. The computational performance was tested by conducting radiation transport simulations of 100 MeV protons and 1 MeV photons in a water phantom represented by tetrahedral mesh. The simulation was repeated with varying number of meshes and the required computational times were then compared with those of the conventional voxel representation. Our results show that the computational costs for each boundary crossing of the region mesh are essentially equivalent for both representations. This study suggests that the tetrahedral-mesh representation offers not only a flexible description of the transport geometry but also improvement of computational efficiency for the radiation transport. Due to the adaptability of tetrahedrons in both size and shape, dosimetrically equivalent objects can be represented by tetrahedrons with a much fewer number of meshes as compared its voxelized representation. Our study additionally included dosimetric calculations using a computational human phantom. A significant acceleration of the computational speed, about 4 times, was confirmed by the adoption of a tetrahedral mesh over the traditional voxel mesh geometry.

  10. A Family of Uniform Strain Tetrahedral Elements and a Method for Connecting Dissimilar Finite Element Meshes

    SciTech Connect

    Dohrmann, C.R.; Heinstein, M.W.; Jung, J.; Key, S.W.

    1999-01-01

    This report documents a collection of papers on a family of uniform strain tetrahedral finite elements and their connection to different element types. Also included in the report are two papers which address the general problem of connecting dissimilar meshes in two and three dimensions. Much of the work presented here was motivated by the development of the tetrahedral element described in the report "A Suitable Low-Order, Eight-Node Tetrahedral Finite Element For Solids," by S. W. Key {ital et al.}, SAND98-0756, March 1998. Two basic issues addressed by the papers are: (1) the performance of alternative tetrahedral elements with uniform strain and enhanced uniform strain formulations, and (2) the proper connection of tetrahedral and other element types when two meshes are "tied" together to represent a single continuous domain.

  11. A tetrahedral mesh generation approach for 3D marine controlled-source electromagnetic modeling

    NASA Astrophysics Data System (ADS)

    Um, Evan Schankee; Kim, Seung-Sep; Fu, Haohuan

    2017-03-01

    3D finite-element (FE) mesh generation is a major hurdle for marine controlled-source electromagnetic (CSEM) modeling. In this paper, we present a FE discretization operator (FEDO) that automatically converts a 3D finite-difference (FD) model into reliable and efficient tetrahedral FE meshes for CSEM modeling. FEDO sets up wireframes of a background seabed model that precisely honors the seafloor topography. The wireframes are then partitioned into multiple regions. Outer regions of the wireframes are discretized with coarse tetrahedral elements whose maximum size is as large as a skin depth of the regions. We demonstrate that such coarse meshes can produce accurate FE solutions because numerical dispersion errors of tetrahedral meshes do not accumulate but oscillates. In contrast, central regions of the wireframes are discretized with fine tetrahedral elements to describe complex geology in detail. The conductivity distribution is mapped from FD to FE meshes in a volume-averaged sense. To avoid excessive mesh refinement around receivers, we introduce an effective receiver size. Major advantages of FEDO are summarized as follow. First, FEDO automatically generates reliable and economic tetrahedral FE meshes without adaptive meshing or interactive CAD workflows. Second, FEDO produces FE meshes that precisely honor the boundaries of the seafloor topography. Third, FEDO derives multiple sets of FE meshes from a given FD model. Each FE mesh is optimized for a different set of sources and receivers and is fed to a subgroup of processors on a parallel computer. This divide and conquer approach improves the parallel scalability of the FE solution. Both accuracy and effectiveness of FEDO are demonstrated with various CSEM examples.

  12. Parallel tetrahedral mesh adaptation with dynamic load balancing

    SciTech Connect

    Oliker, Leonid; Biswas, Rupak; Gabow, Harold N.

    2000-06-28

    The ability to dynamically adapt an unstructured grid is a powerful tool for efficiently solving computational problems with evolving physical features. In this paper, we report on our experience parallelizing an edge-based adaptation scheme, called 3D-TAG, using message passing. Results show excellent speedup when a realistic helicopter rotor mesh is randomly refined. However, performance deteriorates when the mesh is refined using a solution-based error indicator since mesh adaptation for practical problems occurs in a localized region, creating a severe load imbalance. To address this problem, we have developed PLUM, a global dynamic load balancing framework for adaptive numerical computations. Even though PLUM primarily balances processor workloads for the solution phase, it reduces the load imbalance problem within mesh adaptation by repartitioning the mesh after targeting edges for refinement but before the actual subdivision. This dramatically improves the performance of parallel 3D-TAG since refinement occurs in a more load balanced fashion. We also present optimal and heuristic algorithms that, when applied to the default mapping of a parallel repartitioner, significantly reduce the data redistribution overhead. Finally, portability is examined by comparing performance on three state-of-the-art parallel machines.

  13. Parallel Tetrahedral Mesh Adaptation with Dynamic Load Balancing

    NASA Technical Reports Server (NTRS)

    Oliker, Leonid; Biswas, Rupak; Gabow, Harold N.

    1999-01-01

    The ability to dynamically adapt an unstructured grid is a powerful tool for efficiently solving computational problems with evolving physical features. In this paper, we report on our experience parallelizing an edge-based adaptation scheme, called 3D_TAG. using message passing. Results show excellent speedup when a realistic helicopter rotor mesh is randomly refined. However. performance deteriorates when the mesh is refined using a solution-based error indicator since mesh adaptation for practical problems occurs in a localized region., creating a severe load imbalance. To address this problem, we have developed PLUM, a global dynamic load balancing framework for adaptive numerical computations. Even though PLUM primarily balances processor workloads for the solution phase, it reduces the load imbalance problem within mesh adaptation by repartitioning the mesh after targeting edges for refinement but before the actual subdivision. This dramatically improves the performance of parallel 3D_TAG since refinement occurs in a more load balanced fashion. We also present optimal and heuristic algorithms that, when applied to the default mapping of a parallel repartitioner, significantly reduce the data redistribution overhead. Finally, portability is examined by comparing performance on three state-of-the-art parallel machines.

  14. Automated Tetrahedral Mesh Generation for CFD Analysis of Aircraft in Conceptual Design

    NASA Technical Reports Server (NTRS)

    Ordaz, Irian; Li, Wu; Campbell, Richard L.

    2014-01-01

    The paper introduces an automation process of generating a tetrahedral mesh for computational fluid dynamics (CFD) analysis of aircraft configurations in early conceptual design. The method was developed for CFD-based sonic boom analysis of supersonic configurations, but can be applied to aerodynamic analysis of aircraft configurations in any flight regime.

  15. Algebraic mesh quality metrics

    SciTech Connect

    KNUPP,PATRICK

    2000-04-24

    Quality metrics for structured and unstructured mesh generation are placed within an algebraic framework to form a mathematical theory of mesh quality metrics. The theory, based on the Jacobian and related matrices, provides a means of constructing, classifying, and evaluating mesh quality metrics. The Jacobian matrix is factored into geometrically meaningful parts. A nodally-invariant Jacobian matrix can be defined for simplicial elements using a weight matrix derived from the Jacobian matrix of an ideal reference element. Scale and orientation-invariant algebraic mesh quality metrics are defined. the singular value decomposition is used to study relationships between metrics. Equivalence of the element condition number and mean ratio metrics is proved. Condition number is shown to measure the distance of an element to the set of degenerate elements. Algebraic measures for skew, length ratio, shape, volume, and orientation are defined abstractly, with specific examples given. Combined metrics for shape and volume, shape-volume-orientation are algebraically defined and examples of such metrics are given. Algebraic mesh quality metrics are extended to non-simplical elements. A series of numerical tests verify the theoretical properties of the metrics defined.

  16. Transport of phase space densities through tetrahedral meshes using discrete flow mapping

    NASA Astrophysics Data System (ADS)

    Bajars, Janis; Chappell, David J.; Søndergaard, Niels; Tanner, Gregor

    2017-01-01

    Discrete flow mapping was recently introduced as an efficient ray based method determining wave energy distributions in complex built up structures. Wave energy densities are transported along ray trajectories through polygonal mesh elements using a finite dimensional approximation of a ray transfer operator. In this way the method can be viewed as a smoothed ray tracing method defined over meshed surfaces. Many applications require the resolution of wave energy distributions in three-dimensional domains, such as in room acoustics, underwater acoustics and for electromagnetic cavity problems. In this work we extend discrete flow mapping to three-dimensional domains by propagating wave energy densities through tetrahedral meshes. The geometric simplicity of the tetrahedral mesh elements is utilised to efficiently compute the ray transfer operator using a mixture of analytic and spectrally accurate numerical integration. The important issue of how to choose a suitable basis approximation in phase space whilst maintaining a reasonable computational cost is addressed via low order local approximations on tetrahedral faces in the position coordinate and high order orthogonal polynomial expansions in momentum space.

  17. Tetrahedral-Mesh Simulation of Turbulent Flows with the Space-Time Conservative Schemes

    NASA Technical Reports Server (NTRS)

    Chang, Chau-Lyan; Venkatachari, Balaji; Cheng, Gary C.

    2015-01-01

    Direct numerical simulations of turbulent flows are predominantly carried out using structured, hexahedral meshes despite decades of development in unstructured mesh methods. Tetrahedral meshes offer ease of mesh generation around complex geometries and the potential of an orientation free grid that would provide un-biased small-scale dissipation and more accurate intermediate scale solutions. However, due to the lack of consistent multi-dimensional numerical formulations in conventional schemes for triangular and tetrahedral meshes at the cell interfaces, numerical issues exist when flow discontinuities or stagnation regions are present. The space-time conservative conservation element solution element (CESE) method - due to its Riemann-solver-free shock capturing capabilities, non-dissipative baseline schemes, and flux conservation in time as well as space - has the potential to more accurately simulate turbulent flows using unstructured tetrahedral meshes. To pave the way towards accurate simulation of shock/turbulent boundary-layer interaction, a series of wave and shock interaction benchmark problems that increase in complexity, are computed in this paper with triangular/tetrahedral meshes. Preliminary computations for the normal shock/turbulence interactions are carried out with a relatively coarse mesh, by direct numerical simulations standards, in order to assess other effects such as boundary conditions and the necessity of a buffer domain. The results indicate that qualitative agreement with previous studies can be obtained for flows where, strong shocks co-exist along with unsteady waves that display a broad range of scales, with a relatively compact computational domain and less stringent requirements for grid clustering near the shock. With the space-time conservation properties, stable solutions without any spurious wave reflections can be obtained without a need for buffer domains near the outflow/farfield boundaries. Computational results for the

  18. A Reactor Pressure Vessel Dosimetry Calculation Using ATTILA, An Unstructured Tetrahedral Mesh Discrete-Ordinates Code

    SciTech Connect

    Wareing, T.A.; Parsons, D.K.; Pautz, S.

    1997-12-31

    Recently, a new state-of-the-art discrete-ordinates code, ATTILA, was developed. ATTILA provides the capabilities to solve geometrically complex 3-D transport problems by using an unstructured tetrahedral mesh. In this paper we describe the application of ATTILA to a 3-D reactor pressure vessel dosimetry problem. We provide numerical results from ATTILA and the Monte Carlo code, MCNP. The results demonstrate the effectiveness and efficiency of ATTILA for such calculations.

  19. Split-Cell, Linear Characteristic Transport Method for Unstructured Tetrahedral Meshes

    SciTech Connect

    Mathews, Kirk A.; Miller, Rodney L.; Brennan, Charles R.

    2000-10-15

    The linear characteristic (LC) method is extended to unstructured meshes of tetrahedral cells in three-dimensional Cartesian coordinates. For each ordinate in a discrete ordinates sweep, each cell is split into subcells along a line parallel to the ordinate. Direct affine transformations among appropriate oblique Cartesian coordinate systems for the faces and interior of each cell and subcell are used to simplify the characteristic transport through each subcell. This approach is straightforward and eliminates computationally expensive trigonometric functions. An efficient and well-conditioned technique for evaluating the required integral moments of exponential functions is presented. Various test problems are used to demonstrate (a) the approach to cubic convergence as the mesh is refined, (b) insensitivity to the details of irregular meshes, and (c) numerical robustness. These tests also show that meshes should represent volumes of regions with curved as well as planar boundaries exactly and that cells should have optical thicknesses throughout the mesh that are more or less equal. A hybrid Monte Carlo/discrete ordinates method, together with MCNP, is used to distinguish between error introduced by the angular and the spatial quadratures. We conclude that the LC method should be a practical and reliable scheme for these meshes, presuming that the cells are not optically too thick.

  20. Computing Normal Shock-Isotropic Turbulence Interaction With Tetrahedral Meshes and the Space-Time CESE Method

    NASA Astrophysics Data System (ADS)

    Venkatachari, Balaji Shankar; Chang, Chau-Lyan

    2016-11-01

    The focus of this study is scale-resolving simulations of the canonical normal shock- isotropic turbulence interaction using unstructured tetrahedral meshes and the space-time conservation element solution element (CESE) method. Despite decades of development in unstructured mesh methods and its potential benefits of ease of mesh generation around complex geometries and mesh adaptation, direct numerical or large-eddy simulations of turbulent flows are predominantly carried out using structured hexahedral meshes. This is due to the lack of consistent multi-dimensional numerical formulations in conventional schemes for unstructured meshes that can resolve multiple physical scales and flow discontinuities simultaneously. The CESE method - due to its Riemann-solver-free shock capturing capabilities, non-dissipative baseline schemes, and flux conservation in time as well as space - has the potential to accurately simulate turbulent flows using tetrahedral meshes. As part of the study, various regimes of the shock-turbulence interaction (wrinkled and broken shock regimes) will be investigated along with a study on how adaptive refinement of tetrahedral meshes benefits this problem. The research funding for this paper has been provided by Revolutionary Computational Aerosciences (RCA) subproject under the NASA Transformative Aeronautics Concepts Program (TACP).

  1. New approach based on tetrahedral-mesh geometry for accurate 4D Monte Carlo patient-dose calculation

    NASA Astrophysics Data System (ADS)

    Han, Min Cheol; Yeom, Yeon Soo; Kim, Chan Hyeong; Kim, Seonghoon; Sohn, Jason W.

    2015-02-01

    In the present study, to achieve accurate 4D Monte Carlo dose calculation in radiation therapy, we devised a new approach that combines (1) modeling of the patient body using tetrahedral-mesh geometry based on the patient’s 4D CT data, (2) continuous movement/deformation of the tetrahedral patient model by interpolation of deformation vector fields acquired through deformable image registration, and (3) direct transportation of radiation particles during the movement and deformation of the tetrahedral patient model. The results of our feasibility study show that it is certainly possible to construct 4D patient models (= phantoms) with sufficient accuracy using the tetrahedral-mesh geometry and to directly transport radiation particles during continuous movement and deformation of the tetrahedral patient model. This new approach not only produces more accurate dose distribution in the patient but also replaces the current practice of using multiple 3D voxel phantoms and combining multiple dose distributions after Monte Carlo simulations. For routine clinical application of our new approach, the use of fast automatic segmentation algorithms is a must. In order to achieve, simultaneously, both dose accuracy and computation speed, the number of tetrahedrons for the lungs should be optimized. Although the current computation speed of our new 4D Monte Carlo simulation approach is slow (i.e. ~40 times slower than that of the conventional dose accumulation approach), this problem is resolvable by developing, in Geant4, a dedicated navigation class optimized for particle transportation in tetrahedral-mesh geometry.

  2. New approach based on tetrahedral-mesh geometry for accurate 4D Monte Carlo patient-dose calculation.

    PubMed

    Han, Min Cheol; Yeom, Yeon Soo; Kim, Chan Hyeong; Kim, Seonghoon; Sohn, Jason W

    2015-02-21

    In the present study, to achieve accurate 4D Monte Carlo dose calculation in radiation therapy, we devised a new approach that combines (1) modeling of the patient body using tetrahedral-mesh geometry based on the patient's 4D CT data, (2) continuous movement/deformation of the tetrahedral patient model by interpolation of deformation vector fields acquired through deformable image registration, and (3) direct transportation of radiation particles during the movement and deformation of the tetrahedral patient model. The results of our feasibility study show that it is certainly possible to construct 4D patient models (= phantoms) with sufficient accuracy using the tetrahedral-mesh geometry and to directly transport radiation particles during continuous movement and deformation of the tetrahedral patient model. This new approach not only produces more accurate dose distribution in the patient but also replaces the current practice of using multiple 3D voxel phantoms and combining multiple dose distributions after Monte Carlo simulations. For routine clinical application of our new approach, the use of fast automatic segmentation algorithms is a must. In order to achieve, simultaneously, both dose accuracy and computation speed, the number of tetrahedrons for the lungs should be optimized. Although the current computation speed of our new 4D Monte Carlo simulation approach is slow (i.e. ~40 times slower than that of the conventional dose accumulation approach), this problem is resolvable by developing, in Geant4, a dedicated navigation class optimized for particle transportation in tetrahedral-mesh geometry.

  3. A point-centered arbitrary Lagrangian Eulerian hydrodynamic approach for tetrahedral meshes

    SciTech Connect

    Morgan, Nathaniel R.; Waltz, Jacob I.; Burton, Donald E.; Charest, Marc R.; Canfield, Thomas R.; Wohlbier, John G.

    2015-02-24

    We present a three dimensional (3D) arbitrary Lagrangian Eulerian (ALE) hydrodynamic scheme suitable for modeling complex compressible flows on tetrahedral meshes. The new approach stores the conserved variables (mass, momentum, and total energy) at the nodes of the mesh and solves the conservation equations on a control volume surrounding the point. This type of an approach is termed a point-centered hydrodynamic (PCH) method. The conservation equations are discretized using an edge-based finite element (FE) approach with linear basis functions. All fluxes in the new approach are calculated at the center of each tetrahedron. A multidirectional Riemann-like problem is solved at the center of the tetrahedron. The advective fluxes are calculated by solving a 1D Riemann problem on each face of the nodal control volume. A 2-stage Runge–Kutta method is used to evolve the solution forward in time, where the advective fluxes are part of the temporal integration. The mesh velocity is smoothed by solving a Laplacian equation. The details of the new ALE hydrodynamic scheme are discussed. Results from a range of numerical test problems are presented.

  4. A point-centered arbitrary Lagrangian Eulerian hydrodynamic approach for tetrahedral meshes

    DOE PAGES

    Morgan, Nathaniel R.; Waltz, Jacob I.; Burton, Donald E.; ...

    2015-02-24

    We present a three dimensional (3D) arbitrary Lagrangian Eulerian (ALE) hydrodynamic scheme suitable for modeling complex compressible flows on tetrahedral meshes. The new approach stores the conserved variables (mass, momentum, and total energy) at the nodes of the mesh and solves the conservation equations on a control volume surrounding the point. This type of an approach is termed a point-centered hydrodynamic (PCH) method. The conservation equations are discretized using an edge-based finite element (FE) approach with linear basis functions. All fluxes in the new approach are calculated at the center of each tetrahedron. A multidirectional Riemann-like problem is solved atmore » the center of the tetrahedron. The advective fluxes are calculated by solving a 1D Riemann problem on each face of the nodal control volume. A 2-stage Runge–Kutta method is used to evolve the solution forward in time, where the advective fluxes are part of the temporal integration. The mesh velocity is smoothed by solving a Laplacian equation. The details of the new ALE hydrodynamic scheme are discussed. Results from a range of numerical test problems are presented.« less

  5. Tetrahedral vs. polyhedral mesh size evaluation on flow velocity and wall shear stress for cerebral hemodynamic simulation.

    PubMed

    Spiegel, Martin; Redel, Thomas; Zhang, Y Jonathan; Struffert, Tobias; Hornegger, Joachim; Grossman, Robert G; Doerfler, Arnd; Karmonik, Christof

    2011-01-01

    Haemodynamic factors, in particular wall shear stresses (WSSs) may have significant impact on growth and rupture of cerebral aneurysms. Without a means to measure WSS reliably in vivo, computational fluid dynamic (CFD) simulations are frequently employed to visualise and quantify blood flow from patient-specific computational models. With increasing interest in integrating these CFD simulations into pretreatment planning, a better understanding of the validity of the calculations in respect to computation parameters such as volume element type, mesh size and mesh composition is needed. In this study, CFD results for the two most common aneurysm types (saccular and terminal) are compared for polyhedral- vs. tetrahedral-based meshes and discussed regarding future clinical applications. For this purpose, a set of models were constructed for each aneurysm with spatially varying surface and volume mesh configurations (mesh size range: 5119-258, 481 volume elements). WSS distribution on the model wall and point-based velocity measurements were compared for each configuration model. Our results indicate a benefit of polyhedral meshes in respect to convergence speed and more homogeneous WSS patterns. Computational variations of WSS values and blood velocities are between 0.84 and 6.3% from the most simple mesh (tetrahedral elements only) and the most advanced mesh design investigated (polyhedral mesh with boundary layer).

  6. The use of tetrahedral mesh geometries in Monte Carlo simulation of applicator based brachytherapy dose distributions

    NASA Astrophysics Data System (ADS)

    Paiva Fonseca, Gabriel; Landry, Guillaume; White, Shane; D'Amours, Michel; Yoriyaz, Hélio; Beaulieu, Luc; Reniers, Brigitte; Verhaegen, Frank

    2014-10-01

    Accounting for brachytherapy applicator attenuation is part of the recommendations from the recent report of AAPM Task Group 186. To do so, model based dose calculation algorithms require accurate modelling of the applicator geometry. This can be non-trivial in the case of irregularly shaped applicators such as the Fletcher Williamson gynaecological applicator or balloon applicators with possibly irregular shapes employed in accelerated partial breast irradiation (APBI) performed using electronic brachytherapy sources (EBS). While many of these applicators can be modelled using constructive solid geometry (CSG), the latter may be difficult and time-consuming. Alternatively, these complex geometries can be modelled using tessellated geometries such as tetrahedral meshes (mesh geometries (MG)). Recent versions of Monte Carlo (MC) codes Geant4 and MCNP6 allow for the use of MG. The goal of this work was to model a series of applicators relevant to brachytherapy using MG. Applicators designed for 192Ir sources and 50 kV EBS were studied; a shielded vaginal applicator, a shielded Fletcher Williamson applicator and an APBI balloon applicator. All applicators were modelled in Geant4 and MCNP6 using MG and CSG for dose calculations. CSG derived dose distributions were considered as reference and used to validate MG models by comparing dose distribution ratios. In general agreement within 1% for the dose calculations was observed for all applicators between MG and CSG and between codes when considering volumes inside the 25% isodose surface. When compared to CSG, MG required longer computation times by a factor of at least 2 for MC simulations using the same code. MCNP6 calculation times were more than ten times shorter than Geant4 in some cases. In conclusion we presented methods allowing for high fidelity modelling with results equivalent to CSG. To the best of our knowledge MG offers the most accurate representation of an irregular APBI balloon applicator.

  7. The Space-Time Conservative Schemes for Large-Scale, Time-Accurate Flow Simulations with Tetrahedral Meshes

    NASA Technical Reports Server (NTRS)

    Venkatachari, Balaji Shankar; Streett, Craig L.; Chang, Chau-Lyan; Friedlander, David J.; Wang, Xiao-Yen; Chang, Sin-Chung

    2016-01-01

    Despite decades of development of unstructured mesh methods, high-fidelity time-accurate simulations are still predominantly carried out on structured, or unstructured hexahedral meshes by using high-order finite-difference, weighted essentially non-oscillatory (WENO), or hybrid schemes formed by their combinations. In this work, the space-time conservation element solution element (CESE) method is used to simulate several flow problems including supersonic jet/shock interaction and its impact on launch vehicle acoustics, and direct numerical simulations of turbulent flows using tetrahedral meshes. This paper provides a status report for the continuing development of the space-time conservation element solution element (CESE) numerical and software framework under the Revolutionary Computational Aerosciences (RCA) project. Solution accuracy and large-scale parallel performance of the numerical framework is assessed with the goal of providing a viable paradigm for future high-fidelity flow physics simulations.

  8. Efficient calculation of the quasi-static electrical potential on a tetrahedral mesh and its implementation in STEPS.

    PubMed

    Hepburn, Iain; Cannon, Robert; De Schutter, Erik

    2013-01-01

    We describe a novel method for calculating the quasi-static electrical potential on tetrahedral meshes, which we call E-Field. The E-Field method is implemented in STEPS, which performs stochastic spatial reaction-diffusion computations in tetrahedral-based cellular geometry reconstructions. This provides a level of integration between electrical excitability and spatial molecular dynamics in realistic cellular morphology not previously achievable. Deterministic solutions are also possible. By performing the Rallpack tests we demonstrate the accuracy of the E-Field method. Efficient node ordering is an important practical consideration, and we find that a breadth-first search provides the best solutions, although principal axis ordering suffices for some geometries. We discuss potential applications and possible future directions, and predict that the E-Field implementation in STEPS will play an important role in the future of multiscale neural simulations.

  9. Efficient calculation of the quasi-static electrical potential on a tetrahedral mesh and its implementation in STEPS

    PubMed Central

    Hepburn, Iain; Cannon, Robert; De Schutter, Erik

    2013-01-01

    We describe a novel method for calculating the quasi-static electrical potential on tetrahedral meshes, which we call E-Field. The E-Field method is implemented in STEPS, which performs stochastic spatial reaction-diffusion computations in tetrahedral-based cellular geometry reconstructions. This provides a level of integration between electrical excitability and spatial molecular dynamics in realistic cellular morphology not previously achievable. Deterministic solutions are also possible. By performing the Rallpack tests we demonstrate the accuracy of the E-Field method. Efficient node ordering is an important practical consideration, and we find that a breadth-first search provides the best solutions, although principal axis ordering suffices for some geometries. We discuss potential applications and possible future directions, and predict that the E-Field implementation in STEPS will play an important role in the future of multiscale neural simulations. PMID:24194715

  10. The Space-Time CESE Method Applied to Viscous Flow Computations with High-Aspect Ratio Triangular or Tetrahedral Meshes

    NASA Astrophysics Data System (ADS)

    Chang, Chau-Lyan; Venkatachari, Balaji

    2016-11-01

    Flow physics near the viscous wall is intrinsically anisotropic in nature, namely, the gradient along the wall normal direction is much larger than that along the other two orthogonal directions parallel to the surface. Accordingly, high aspect ratio meshes are employed near the viscous wall to capture the physics and maintain low grid count. While such arrangement works fine for structured-grid based methods with dimensional splitting that handles derivatives in each direction separately, similar treatments often lead to numerical instability for unstructured-mesh based methods when triangular or tetrahedral meshes are used. The non-splitting treatment of near-wall gradients for high-aspect ratio triangular or tetrahedral elements results in an ill-conditioned linear system of equations that is closely related to the numerical instability. Altering the side lengths of the near wall tetrahedrons in the gradient calculations would make the system less unstable but more dissipative. This research presents recent progress in applying numerical dissipation control in the space-time conservation element solution element (CESE) method to reduce or alleviate the above-mentioned instability while maintaining reasonable solution accuracy.

  11. Three-dimensional dynamic rupture simulation with a high-order discontinuous Galerkin method on unstructured tetrahedral meshes

    NASA Astrophysics Data System (ADS)

    Pelties, Christian; de la Puente, Josep; Ampuero, Jean-Paul; Brietzke, Gilbert B.; Käser, Martin

    2012-02-01

    Accurate and efficient numerical methods to simulate dynamic earthquake rupture and wave propagation in complex media and complex fault geometries are needed to address fundamental questions in earthquake dynamics, to integrate seismic and geodetic data into emerging approaches for dynamic source inversion, and to generate realistic physics-based earthquake scenarios for hazard assessment. Modeling of spontaneous earthquake rupture and seismic wave propagation by a high-order discontinuous Galerkin (DG) method combined with an arbitrarily high-order derivatives (ADER) time integration method was introduced in two dimensions by de la Puente et al. (2009). The ADER-DG method enables high accuracy in space and time and discretization by unstructured meshes. Here we extend this method to three-dimensional dynamic rupture problems. The high geometrical flexibility provided by the usage of tetrahedral elements and the lack of spurious mesh reflections in the ADER-DG method allows the refinement of the mesh close to the fault to model the rupture dynamics adequately while concentrating computational resources only where needed. Moreover, ADER-DG does not generate spurious high-frequency perturbations on the fault and hence does not require artificial Kelvin-Voigt damping. We verify our three-dimensional implementation by comparing results of the SCEC TPV3 test problem with two well-established numerical methods, finite differences, and spectral boundary integral. Furthermore, a convergence study is presented to demonstrate the systematic consistency of the method. To illustrate the capabilities of the high-order accurate ADER-DG scheme on unstructured meshes, we simulate an earthquake scenario, inspired by the 1992 Landers earthquake, that includes curved faults, fault branches, and surface topography.

  12. Application of the grid-characteristic method on unstructured tetrahedral meshes to the solution of direct problems in seismic exploration of fractured layers

    NASA Astrophysics Data System (ADS)

    Biryukov, V. A.; Muratov, M. V.; Petrov, I. B.; Sannikov, A. V.; Favorskaya, A. V.

    2015-10-01

    Seismic responses from fractured geological layers are mathematically simulated by applying the grid-characteristic method on unstructured tetrahedral meshes with the use of high-performance computer systems. The method is intended for computing complicated spatial dynamical processes in complex heterogeneous media and is characterized by exact formulation of contact conditions. As a result, it can be applied to the simulation of seismic exploration problems, including in regions with a large number of inhomogeneities, examples of which are fractured structures. The use of unstructured tetrahedral meshes makes it possible to specify geological cracks of various shapes and spatial orientations. As a result, problems are solved in a formulation maximally close to an actual situation. A cluster of computers is used to improve the accuracy of the computation by optimizing its duration.

  13. Recent Development in the CESE Method for the Solution of the Navier-Stokes Equations Using Unstructured Triangular or Tetrahedral Meshes With High Aspect Ratio

    NASA Technical Reports Server (NTRS)

    Chang, Sin-Chung; Chang, Chau-Lyan; Yen, Joseph C.

    2013-01-01

    In the multidimensional CESE development, triangles and tetrahedra turn out to be the most natural building blocks for 2D and 3D spatial meshes. As such the CESE method is compatible with the simplest unstructured meshes and thus can be easily applied to solve problems with complex geometries. However, because the method uses space-time staggered stencils, solution decoupling may become a real nuisance in applications involving unstructured meshes. In this paper we will describe a simple and general remedy which, according to numerical experiments, has removed any possibility of solution decoupling. Moreover, in a real-world viscous flow simulation near a solid wall, one often encounters a case where a boundary with high curvature or sharp corner is surrounded by triangular/tetrahedral meshes of extremely high aspect ratio (up to 106). For such an extreme case, the spatial projection of a space-time compounded conservation element constructed using the original CESE design may become highly concave and thus its centroid (referred to as a spatial solution point) may lie far outside of the spatial projection. It could even be embedded beyond a solid wall boundary and causes serious numerical difficulties. In this paper we will also present a new procedure for constructing conservation elements and solution elements which effectively overcomes the difficulties associated with the original design. Another difficulty issue which was addressed more recently is the wellknown fact that accuracy of gradient computations involving triangular/tetrahedral grids deteriorates rapidly as the aspect ratio of grid cells increases. The root cause of this difficulty was clearly identified and several remedies to overcome it were found through a rigorous mathematical analysis. However, because of the length of the current paper and the complexity of mathematics involved, this new work will be presented in another paper.

  14. A staggered space-time discontinuous Galerkin method for the three-dimensional incompressible Navier-Stokes equations on unstructured tetrahedral meshes

    NASA Astrophysics Data System (ADS)

    Tavelli, Maurizio; Dumbser, Michael

    2016-08-01

    In this paper we propose a novel arbitrary high order accurate semi-implicit space-time discontinuous Galerkin method for the solution of the three-dimensional incompressible Navier-Stokes equations on staggered unstructured curved tetrahedral meshes. As is typical for space-time DG schemes, the discrete solution is represented in terms of space-time basis functions. This allows to achieve very high order of accuracy also in time, which is not easy to obtain for the incompressible Navier-Stokes equations. Similarly to staggered finite difference schemes, in our approach the discrete pressure is defined on the primary tetrahedral grid, while the discrete velocity is defined on a face-based staggered dual grid. While staggered meshes are state of the art in classical finite difference schemes for the incompressible Navier-Stokes equations, their use in high order DG schemes is still quite rare. A very simple and efficient Picard iteration is used in order to derive a space-time pressure correction algorithm that achieves also high order of accuracy in time and that avoids the direct solution of global nonlinear systems. Formal substitution of the discrete momentum equation on the dual grid into the discrete continuity equation on the primary grid yields a very sparse five-point block system for the scalar pressure, which is conveniently solved with a matrix-free GMRES algorithm. From numerical experiments we find that the linear system seems to be reasonably well conditioned, since all simulations shown in this paper could be run without the use of any preconditioner, even up to very high polynomial degrees. For a piecewise constant polynomial approximation in time and if pressure boundary conditions are specified at least in one point, the resulting system is, in addition, symmetric and positive definite. This allows us to use even faster iterative solvers, like the conjugate gradient method. The flexibility and accuracy of high order space-time DG methods on curved

  15. Quality Multi-domain Meshing for Volumetric Data

    PubMed Central

    Zhang, Qin; Subramanian, Bharadwaj; Xu, Guoliang; Bajaj, Chandrajit L.

    2011-01-01

    Multi-domain meshing from volumetric data is of great importance in many fields like medicine, biology and geology. This paper proposes a new approach to produce a high quality mesh with separated multiple domains. A point cloud is generated from a preliminary mesh representing the boundary between different domains from the discrete volumetric representation used as input. A higher-order level-set method is employed to produce a quality sub-mesh from this point cloud and geometric flow is used as smoothing mechanism. A new approach to detect and curate intersections within an assembly of these 2-manifold sub-meshes by utilizing the intermediate volumetric representation is developed. The separation between sub-meshes can be controlled by the user using a gap threshold parameter. The resulting high quality multi-domain mesh is free from self- and inter-domain intersections and can be further utilized in finite element and boundary element computations. The proposed pipeline has been efficiently implemented and sample meshes have been provided for visualization. PMID:21544233

  16. An 8-node tetrahedral finite element suitable for explicit transient dynamic simulations

    SciTech Connect

    Key, S.W.; Heinstein, M.W.; Stone, C.M.

    1997-12-31

    Considerable effort has been expended in perfecting the algorithmic properties of 8-node hexahedral finite elements. Today the element is well understood and performs exceptionally well when used in modeling three-dimensional explicit transient dynamic events. However, the automatic generation of all-hexahedral meshes remains an elusive achievement. The alternative of automatic generation for all-tetrahedral finite element is a notoriously poor performer, and the 10-node quadratic tetrahedral finite element while a better performer numerically is computationally expensive. To use the all-tetrahedral mesh generation extant today, the authors have explored the creation of a quality 8-node tetrahedral finite element (a four-node tetrahedral finite element enriched with four midface nodal points). The derivation of the element`s gradient operator, studies in obtaining a suitable mass lumping and the element`s performance in applications are presented. In particular, they examine the 80node tetrahedral finite element`s behavior in longitudinal plane wave propagation, in transverse cylindrical wave propagation, and in simulating Taylor bar impacts. The element only samples constant strain states and, therefore, has 12 hourglass modes. In this regard, it bears similarities to the 8-node, mean-quadrature hexahedral finite element. Given automatic all-tetrahedral meshing, the 8-node, constant-strain tetrahedral finite element is a suitable replacement for the 8-node hexahedral finite element and handbuilt meshes.

  17. Unstructured mesh quality assessment and upwind Euler solution algorithm validation

    NASA Astrophysics Data System (ADS)

    Woodard, Paul R.; Batina, John T.; Yang, Henry T. Y.

    1994-05-01

    Quality assessment procedures are described for two and three dimensional unstructured meshes. The procedures include measurement of minimum angles, element aspect ratios, stretching, and element skewness. Meshes about the ONERA M6 wing and the Boeing 747 transport configuration are generated using an advancing front method grid generation package of programs. Solutions of the Euler equations for these meshes are obtained at low angle of attack, transonic conditions. Results for these cases, obtained as part of a validation study, investigate accuracy of an implicit upwind Euler solution algorithm.

  18. A Program to Improve the Triangulated Surface Mesh Quality Along Aircraft Component Intersections

    NASA Technical Reports Server (NTRS)

    Cliff, Susan E.

    2005-01-01

    A computer program has been developed for improving the quality of unstructured triangulated surface meshes in the vicinity of component intersections. The method relies solely on point removal and edge swapping for improving the triangulations. It can be applied to any lifting surface component such as a wing, canard or horizontal tail component intersected with a fuselage, or it can be applied to a pylon that is intersected with a wing, fuselage or nacelle. The lifting surfaces or pylon are assumed to be aligned in the axial direction with closed trailing edges. The method currently maintains salient edges only at leading and trailing edges of the wing or pylon component. This method should work well for any shape of fuselage that is free of salient edges at the intersection. The method has been successfully demonstrated on a total of 125 different test cases that include both blunt and sharp wing leading edges. The code is targeted for use in the automated environment of numerical optimization where geometric perturbations to individual components can be critical to the aerodynamic performance of a vehicle. Histograms of triangle aspect ratios are reported to assess the quality of the triangles attached to the intersection curves before and after application of the program. Large improvements to the quality of the triangulations were obtained for the 125 test cases; the quality was sufficient for use with an automated tetrahedral mesh generation program that is used as part of an aerodynamic shape optimization method.

  19. A structured multi-block solution-adaptive mesh algorithm with mesh quality assessment

    NASA Technical Reports Server (NTRS)

    Ingram, Clint L.; Laflin, Kelly R.; Mcrae, D. Scott

    1995-01-01

    The dynamic solution adaptive grid algorithm, DSAGA3D, is extended to automatically adapt 2-D structured multi-block grids, including adaption of the block boundaries. The extension is general, requiring only input data concerning block structure, connectivity, and boundary conditions. Imbedded grid singular points are permitted, but must be prevented from moving in space. Solutions for workshop cases 1 and 2 are obtained on multi-block grids and illustrate both increased resolution of and alignment with the solution. A mesh quality assessment criteria is proposed to determine how well a given mesh resolves and aligns with the solution obtained upon it. The criteria is used to evaluate the grid quality for solutions of workshop case 6 obtained on both static and dynamically adapted grids. The results indicate that this criteria shows promise as a means of evaluating resolution.

  20. A computational study of the effect of unstructured mesh quality on solution efficiency

    SciTech Connect

    Batdorf, M.; Freitag, L.A.; Ollivier-Gooch, C.

    1997-09-01

    It is well known that mesh quality affects both efficiency and accuracy of CFD solutions. Meshes with distorted elements make solutions both more difficult to compute and less accurate. We review a recently proposed technique for improving mesh quality as measured by element angle (dihedral angle in three dimensions) using a combination of optimization-based smoothing techniques and local reconnection schemes. Typical results that quantify mesh improvement for a number of application meshes are presented. We then examine effects of mesh quality as measured by the maximum angle in the mesh on the convergence rates of two commonly used CFD solution techniques. Numerical experiments are performed that quantify the cost and benefit of using mesh optimization schemes for incompressible flow over a cylinder and weakly compressible flow over a cylinder.

  1. Quality Partitioned Meshing of Multi-Material Objects.

    PubMed

    Zhang, Qin; Cha, Deukhyun; Bajaj, Chandrajit

    We present a simple but effective algorithm for generating topologically and geometrically consistent quality triangular surface meshing of compactly packed multiple heterogeneous domains in [Formula: see text]. By compact packing we imply that adjacent homogeneous domains or materials share some 0, 1, and/or 2 dimensional boundary. Such packed multiple material (or multi-material) solids arise naturally from classification/partitioning/segmentation of homogeneous domains in [Formula: see text] into different sub-regions. The multi-materials may also represent separate functionally classified sections or just be multiple component copies tightly fused together as perhaps by layered manufacturing processes. The input to our algorithm is a geometric representation of the entire multi-material solid, and a volumetric classification map identifying the individual materials. As output, each individual material region is represented by a triangulated 2-manifold boundary, with adjacent material regions having shared boundaries. Our algorithm has been implemented, and applied to different multi-material solids, and the results are additionally presented with quantitative analysis of detection and cure of non-manifold interfaces as well as spurious small components. These meshes are useful for combined boundary element analysis, however these simulation results are not presented.

  2. Quality Partitioned Meshing of Multi-Material Objects

    PubMed Central

    Zhang, Qin; Cha, Deukhyun; Bajaj, Chandrajit

    2016-01-01

    We present a simple but effective algorithm for generating topologically and geometrically consistent quality triangular surface meshing of compactly packed multiple heterogeneous domains in R3. By compact packing we imply that adjacent homogeneous domains or materials share some 0, 1, and/or 2 dimensional boundary. Such packed multiple material (or multi-material) solids arise naturally from classification/partitioning/segmentation of homogeneous domains in R3 into different sub-regions. The multi-materials may also represent separate functionally classified sections or just be multiple component copies tightly fused together as perhaps by layered manufacturing processes. The input to our algorithm is a geometric representation of the entire multi-material solid, and a volumetric classification map identifying the individual materials. As output, each individual material region is represented by a triangulated 2-manifold boundary, with adjacent material regions having shared boundaries. Our algorithm has been implemented, and applied to different multi-material solids, and the results are additionally presented with quantitative analysis of detection and cure of non-manifold interfaces as well as spurious small components. These meshes are useful for combined boundary element analysis, however these simulation results are not presented. PMID:27563367

  3. Production-quality Tools for Adaptive Mesh RefinementVisualization

    SciTech Connect

    Weber, Gunther H.; Childs, Hank; Bonnell, Kathleen; Meredith,Jeremy; Miller, Mark; Whitlock, Brad; Bethel, E. Wes

    2007-10-25

    Adaptive Mesh Refinement (AMR) is a highly effectivesimulation method for spanning a large range of spatiotemporal scales,such as astrophysical simulations that must accommodate ranges frominterstellar to sub-planetary. Most mainstream visualization tools stilllack support for AMR as a first class data type and AMR code teams usecustom built applications for AMR visualization. The Department ofEnergy's (DOE's) Science Discovery through Advanced Computing (SciDAC)Visualization and Analytics Center for Enabling Technologies (VACET) isextending and deploying VisIt, an open source visualization tool thataccommodates AMR as a first-class data type, for use asproduction-quality, parallel-capable AMR visual data analysisinfrastructure. This effort will help science teams that use AMR-basedsimulations and who develop their own AMR visual data analysis softwareto realize cost and labor savings.

  4. A computational study of nodal-based tetrahedral element behavior.

    SciTech Connect

    Gullerud, Arne S.

    2010-09-01

    This report explores the behavior of nodal-based tetrahedral elements on six sample problems, and compares their solution to that of a corresponding hexahedral mesh. The problems demonstrate that while certain aspects of the solution field for the nodal-based tetrahedrons provide good quality results, the pressure field tends to be of poor quality. Results appear to be strongly affected by the connectivity of the tetrahedral elements. Simulations that rely on the pressure field, such as those which use material models that are dependent on the pressure (e.g. equation-of-state models), can generate erroneous results. Remeshing can also be strongly affected by these issues. The nodal-based test elements as they currently stand need to be used with caution to ensure that their numerical deficiencies do not adversely affect critical values of interest.

  5. 6th International Meshing Roundtable '97

    SciTech Connect

    White, D.

    1997-09-01

    The goal of the 6th International Meshing Roundtable is to bring together researchers and developers from industry, academia, and government labs in a stimulating, open environment for the exchange of technical information related to the meshing process. In the pas~ the Roundtable has enjoyed significant participation born each of these groups from a wide variety of countries. The Roundtable will consist of technical presentations from contributed papers and abstracts, two invited speakers, and two invited panels of experts discussing topics related to the development and use of automatic mesh generation tools. In addition, this year we will feature a "Bring Your Best Mesh" competition and poster session to encourage discussion and participation from a wide variety of mesh generation tool users. The schedule and evening social events are designed to provide numerous opportunities for informal dialog. A proceedings will be published by Sandia National Laboratories and distributed at the Roundtable. In addition, papers of exceptionally high quaIity will be submitted to a special issue of the International Journal of Computational Geometry and Applications. Papers and one page abstracts were sought that present original results on the meshing process. Potential topics include but are got limited to: Unstructured triangular and tetrahedral mesh generation Unstructured quadrilateral and hexahedral mesh generation Automated blocking and structured mesh generation Mixed element meshing Surface mesh generation Geometry decomposition and clean-up techniques Geometry modification techniques related to meshing Adaptive mesh refinement and mesh quality control Mesh visualization Special purpose meshing algorithms for particular applications Theoretical or novel ideas with practical potential Technical presentations from industrial researchers.

  6. Building Tetrahedral Kites. Grades 6-8.

    ERIC Educational Resources Information Center

    Rushton, Erik; Ryan, Emily; Swift, Charles

    Working in teams of four, students build a tetrahedral kite following a specific set of directions and using specific provided materials. Students use basic processes of manufacturing systems-- cutting, shaping, forming, conditioning, assembling, joining, finishing, and quality control--to manufacture a complete tetrahedral kite within a given…

  7. Assessing the quality of curvilinear coordinate meshes by decomposing the Jacobian matrix

    NASA Technical Reports Server (NTRS)

    Kerlick, G. D.; Klopfer, G. H.

    1982-01-01

    An algebraic decomposition of the Jacobian matrix which relates physical and computational variables is presented. This invertible decomposition parameterizes the mesh by the physically intuitive qualities of cell orientation, cell orthogonality, cell volume, and cell aspect ratio. The decomposition can be used to analyze numerically generated curvilinear coordinate meshes and to assess the contribution of the mesh to the truncation error for any specific differential operator and algorithm. This is worked out in detail for Laplace's equation in nonconservative and conservative forms. The analysis is applied to the solution of the full potential code TAIR, showing grid plots, carpet plots, and truncation error for a NACA 0012 airfoil.

  8. A priori mesh quality metrics for three-dimensional hybrid grids

    SciTech Connect

    Kallinderis, Y. Fotia, S.

    2015-01-01

    Use of general hybrid grids to attain complex-geometry field simulations poses a challenge on estimation of their quality. Apart from the typical problems of non-uniformity and non-orthogonality, the change in element topology is an extra issue to address. The present work derives and evaluates an a priori mesh quality indicator for structured, unstructured, as well as hybrid grids consisting of hexahedra, prisms, tetrahedra, and pyramids. Emphasis is placed on deriving a direct relation between the quality measure and mesh distortion. The work is based on use of the Finite Volume discretization for evaluation of first order spatial derivatives. The analytic form of the truncation error is derived and applied to elementary types of mesh distortion including typical hybrid grid interfaces. The corresponding analytic expressions provide relations between the truncation error and the degree of stretching, skewness, shearing, torsion, expansion, as well as the type of grid interface.

  9. Local meshing plane analysis as a source of information about the gear quality

    NASA Astrophysics Data System (ADS)

    Mączak, Jędrzej

    2013-07-01

    In the paper the application of the local meshing plane concept is discussed and applied for detecting of tooth degradation due to fatigue, and for overall gear quality assessment. Knowing the kinematic properties of the machine (i.e. gear tooth numbers) it is possible to modify the diagnostic signal in such a manner that its fragments will be linked to different rotating parts. This allows for presentation of either raw or processed gearbox signal in a form of three dimensional map on the plane "pinion teeth×gear teeth", called local meshing plane. The meshing plane in Cartesian coordinates z1×z2 allows for precise location and assessment of gear faults in terms of meshing quality of consecutive tooth pairs. Although the method was applied to simulated signals generated by the gearbox model, similar results were obtained for the measurement signals recorded during the back-to-back test stand experiment. The described method could be used for assessing the manufacturing quality of gears, the assembly quality as well as for the gear failure evaluation during normal exploitation.

  10. Shape reconstruction from medical images and quality mesh generation via implicit surfaces

    NASA Astrophysics Data System (ADS)

    Peiró, J.; Formaggia, L.; Gazzola, M.; Radaelli, A.; Rigamonti, V.

    2007-03-01

    The ability of automatically reconstructing physiological shapes, of generating computational meshes, and of calculating flow solutions from medical images is enabling the introduction of computational fluid dynamics (CFD) techniques as an additional tool to aid clinical practice.This article presents a set of procedures for the shape reconstruction and triangulation of geometries derived from a set of medical images representing planar cross sections of the object. The reconstruction of the shape of the boundary is based on the interpolation of an implicit function through a set of points obtained from the segmentation of the images. This approach is favoured for its ability of smoothly interpolating between sections of different topology. The boundary of the object is an iso-surface of the implicit function that is approximated by a triangulation extracted by the method of marching cubes. The quality of this triangulation is often neither suitable for mesh generation nor for flow solution. We discuss the use of mesh enhancement techniques to maximize the quality of the triangulation together with curvature adaption to optimize mesh resolution.The proposed methodology is applied to the reconstruction and discretization of two physiological geometries: a femoral by-pass graft and a nasal cavity.

  11. Automatic MeSH term assignment and quality assessment.

    PubMed Central

    Kim, W.; Aronson, A. R.; Wilbur, W. J.

    2001-01-01

    For computational purposes documents or other objects are most often represented by a collection of individual attributes that may be strings or numbers. Such attributes are often called features and success in solving a given problem can depend critically on the nature of the features selected to represent documents. Feature selection has received considerable attention in the machine learning literature. In the area of document retrieval we refer to feature selection as indexing. Indexing has not traditionally been evaluated by the same methods used in machine learning feature selection. Here we show how indexing quality may be evaluated in a machine learning setting and apply this methodology to results of the Indexing Initiative at the National Library of Medicine. PMID:11825203

  12. Multi-Dimensional, Inviscid Flux Reconstruction for Simulation of Hypersonic Heating on Tetrahedral Grids

    NASA Technical Reports Server (NTRS)

    Gnoffo, Peter A.

    2009-01-01

    The quality of simulated hypersonic stagnation region heating on tetrahedral meshes is investigated by using a three-dimensional, upwind reconstruction algorithm for the inviscid flux vector. Two test problems are investigated: hypersonic flow over a three-dimensional cylinder with special attention to the uniformity of the solution in the spanwise direction and hypersonic flow over a three-dimensional sphere. The tetrahedral cells used in the simulation are derived from a structured grid where cell faces are bisected across the diagonal resulting in a consistent pattern of diagonals running in a biased direction across the otherwise symmetric domain. This grid is known to accentuate problems in both shock capturing and stagnation region heating encountered with conventional, quasi-one-dimensional inviscid flux reconstruction algorithms. Therefore the test problem provides a sensitive test for algorithmic effects on heating. This investigation is believed to be unique in its focus on three-dimensional, rotated upwind schemes for the simulation of hypersonic heating on tetrahedral grids. This study attempts to fill the void left by the inability of conventional (quasi-one-dimensional) approaches to accurately simulate heating in a tetrahedral grid system. Results show significant improvement in spanwise uniformity of heating with some penalty of ringing at the captured shock. Issues with accuracy near the peak shear location are identified and require further study.

  13. Spherical geodesic mesh generation

    SciTech Connect

    Fung, Jimmy; Kenamond, Mark Andrew; Burton, Donald E.; Shashkov, Mikhail Jurievich

    2015-02-27

    In ALE simulations with moving meshes, mesh topology has a direct influence on feature representation and code robustness. In three-dimensional simulations, modeling spherical volumes and features is particularly challenging for a hydrodynamics code. Calculations on traditional spherical meshes (such as spin meshes) often lead to errors and symmetry breaking. Although the underlying differencing scheme may be modified to rectify this, the differencing scheme may not be accessible. This work documents the use of spherical geodesic meshes to mitigate solution-mesh coupling. These meshes are generated notionally by connecting geodesic surface meshes to produce triangular-prismatic volume meshes. This mesh topology is fundamentally different from traditional mesh topologies and displays superior qualities such as topological symmetry. This work describes the geodesic mesh topology as well as motivating demonstrations with the FLAG hydrocode.

  14. Quality assessment of two- and three-dimensional unstructured meshes and validation of an upwind Euler flow solver

    NASA Technical Reports Server (NTRS)

    Woodard, Paul R.; Batina, John T.; Yang, Henry T. Y.

    1992-01-01

    Quality assessment procedures are described for two-dimensional unstructured meshes. The procedures include measurement of minimum angles, element aspect ratios, stretching, and element skewness. Meshes about the ONERA M6 wing and the Boeing 747 transport configuration are generated using an advancing front method grid generation package of programs. Solutions of Euler's equations for these meshes are obtained at low angle-of-attack, transonic conditions. Results for these cases, obtained as part of a validation study demonstrate accuracy of an implicit upwind Euler solution algorithm.

  15. Quality assessment of two- and three-dimensional unstructured meshes and validation of an upwind Euler flow solver

    NASA Technical Reports Server (NTRS)

    Woodard, Paul R.; Yang, Henry T. Y.; Batina, John T.

    1992-01-01

    Quality assessment procedures are described for two-dimensional and three-dimensional unstructured meshes. The procedures include measurement of minimum angles, element aspect ratios, stretching, and element skewness. Meshes about the ONERA M6 wing and the Boeing 747 transport configuration are generated using an advancing front method grid generation package of programs. Solutions of Euler's equations for these meshes are obtained at low angle-of-attack, transonic conditions. Results for these cases, obtained as part of a validation study demonstrate the accuracy of an implicit upwind Euler solution algorithm.

  16. Curved mesh generation and mesh refinement using Lagrangian solid mechanics

    SciTech Connect

    Persson, P.-O.; Peraire, J.

    2008-12-31

    We propose a method for generating well-shaped curved unstructured meshes using a nonlinear elasticity analogy. The geometry of the domain to be meshed is represented as an elastic solid. The undeformed geometry is the initial mesh of linear triangular or tetrahedral elements. The external loading results from prescribing a boundary displacement to be that of the curved geometry, and the final configuration is determined by solving for the equilibrium configuration. The deformations are represented using piecewise polynomials within each element of the original mesh. When the mesh is sufficiently fine to resolve the solid deformation, this method guarantees non-intersecting elements even for highly distorted or anisotropic initial meshes. We describe the method and the solution procedures, and we show a number of examples of two and three dimensional simplex meshes with curved boundaries. We also demonstrate how to use the technique for local refinement of non-curved meshes in the presence of curved boundaries.

  17. Updates to Multi-Dimensional Flux Reconstruction for Hypersonic Simulations on Tetrahedral Grids

    NASA Technical Reports Server (NTRS)

    Gnoffo, Peter A.

    2010-01-01

    The quality of simulated hypersonic stagnation region heating with tetrahedral meshes is investigated by using an updated three-dimensional, upwind reconstruction algorithm for the inviscid flux vector. An earlier implementation of this algorithm provided improved symmetry characteristics on tetrahedral grids compared to conventional reconstruction methods. The original formulation however displayed quantitative differences in heating and shear that were as large as 25% compared to a benchmark, structured-grid solution. The primary cause of this discrepancy is found to be an inherent inconsistency in the formulation of the flux limiter. The inconsistency is removed by employing a Green-Gauss formulation of primitive gradients at nodes to replace the previous Gram-Schmidt algorithm. Current results are now in good agreement with benchmark solutions for two challenge problems: (1) hypersonic flow over a three-dimensional cylindrical section with special attention to the uniformity of the solution in the spanwise direction and (2) hypersonic flow over a three-dimensional sphere. The tetrahedral cells used in the simulation are derived from a structured grid where cell faces are bisected across the diagonal resulting in a consistent pattern of diagonals running in a biased direction across the otherwise symmetric domain. This grid is known to accentuate problems in both shock capturing and stagnation region heating encountered with conventional, quasi-one-dimensional inviscid flux reconstruction algorithms. Therefore the test problems provide a sensitive indicator for algorithmic effects on heating. Additional simulations on a sharp, double cone and the shuttle orbiter are then presented to demonstrate the capabilities of the new algorithm on more geometrically complex flows with tetrahedral grids. These results provide the first indication that pure tetrahedral elements utilizing the updated, three-dimensional, upwind reconstruction algorithm may be used for the

  18. Uniformity in Tetrahedral Hohlraums

    NASA Astrophysics Data System (ADS)

    Craxton, R. S.; Schnittman, J. D.; Pollaine, S. M.

    1996-11-01

    Tetrahedral hohlraums, i.e., spherical hohlraums with four laser entrance holes (LEH's), offer an alternative means of obtaining good time-independent capsule irradiation uniformity. Since the laser spots are spread fairly uniformly over the hohlraum wall, time-dependent uniformity swings are minimized. Using the 3-D view-factor code BUTTERCUP we have found, for both OMEGA and the NIF, that the uniformity is typically ~2% rms at all times, mainly in the Y_32 mode, but can be reduced to ~1% by independently varying the power in each beam. We have investigated the sensitivity of tetrahedral hohlraums to errors in beam-energy balance and pointing, and we have examined how large the LEH's must be to allow the beams to go through without refraction or absorption. This work was supported by the U.S. Department of Energy Office of Inertial Confinement Fusion under Cooperative Agreement No. DE-FC03-92SF19460. *Also Lawrence Livermore National Laboratory.

  19. A Robust and Scalable Software Library for Parallel Adaptive Refinement on Unstructured Meshes

    NASA Technical Reports Server (NTRS)

    Lou, John Z.; Norton, Charles D.; Cwik, Thomas A.

    1999-01-01

    The design and implementation of Pyramid, a software library for performing parallel adaptive mesh refinement (PAMR) on unstructured meshes, is described. This software library can be easily used in a variety of unstructured parallel computational applications, including parallel finite element, parallel finite volume, and parallel visualization applications using triangular or tetrahedral meshes. The library contains a suite of well-designed and efficiently implemented modules that perform operations in a typical PAMR process. Among these are mesh quality control during successive parallel adaptive refinement (typically guided by a local-error estimator), parallel load-balancing, and parallel mesh partitioning using the ParMeTiS partitioner. The Pyramid library is implemented in Fortran 90 with an interface to the Message-Passing Interface (MPI) library, supporting code efficiency, modularity, and portability. An EM waveguide filter application, adaptively refined using the Pyramid library, is illustrated.

  20. Fast segmentation and high-quality three-dimensional volume mesh creation from medical images for diffuse optical tomography

    NASA Astrophysics Data System (ADS)

    Jermyn, Michael; Ghadyani, Hamid; Mastanduno, Michael A.; Turner, Wes; Davis, Scott C.; Dehghani, Hamid; Pogue, Brian W.

    2013-08-01

    Multimodal approaches that combine near-infrared (NIR) and conventional imaging modalities have been shown to improve optical parameter estimation dramatically and thus represent a prevailing trend in NIR imaging. These approaches typically involve applying anatomical templates from magnetic resonance imaging/computed tomography/ultrasound images to guide the recovery of optical parameters. However, merging these data sets using current technology requires multiple software packages, substantial expertise, significant time-commitment, and often results in unacceptably poor mesh quality for optical image reconstruction, a reality that represents a significant roadblock for translational research of multimodal NIR imaging. This work addresses these challenges directly by introducing automated digital imaging and communications in medicine image stack segmentation and a new one-click three-dimensional mesh generator optimized for multimodal NIR imaging, and combining these capabilities into a single software package (available for free download) with a streamlined workflow. Image processing time and mesh quality benchmarks were examined for four common multimodal NIR use-cases (breast, brain, pancreas, and small animal) and were compared to a commercial image processing package. Applying these tools resulted in a fivefold decrease in image processing time and 62% improvement in minimum mesh quality, in the absence of extra mesh postprocessing. These capabilities represent a significant step toward enabling translational multimodal NIR research for both expert and nonexpert users in an open-source platform.

  1. Parallel Anisotropic Tetrahedral Adaptation

    NASA Technical Reports Server (NTRS)

    Park, Michael A.; Darmofal, David L.

    2008-01-01

    An adaptive method that robustly produces high aspect ratio tetrahedra to a general 3D metric specification without introducing hybrid semi-structured regions is presented. The elemental operators and higher-level logic is described with their respective domain-decomposed parallelizations. An anisotropic tetrahedral grid adaptation scheme is demonstrated for 1000-1 stretching for a simple cube geometry. This form of adaptation is applicable to more complex domain boundaries via a cut-cell approach as demonstrated by a parallel 3D supersonic simulation of a complex fighter aircraft. To avoid the assumptions and approximations required to form a metric to specify adaptation, an approach is introduced that directly evaluates interpolation error. The grid is adapted to reduce and equidistribute this interpolation error calculation without the use of an intervening anisotropic metric. Direct interpolation error adaptation is illustrated for 1D and 3D domains.

  2. Survivable Lightpath Provisioning in WDM Mesh Networks Under Shared Path Protection and Signal Quality Constraints

    NASA Astrophysics Data System (ADS)

    Yang, Xi; Shen, Lu; Ramamurthy, Byrav

    2005-04-01

    This paper addresses the problem of survivable lightpath provisioning in wavelength-division-multiplexing (WDM) mesh networks, taking into consideration optical-layer protection and some realistic optical signal quality constraints. The investigated networks use sparsely placed optical-electrical-optical (O/E/O) modules for regeneration and wavelength conversion. Given a fixed network topology with a number of sparsely placed O/E/O modules and a set of connection requests, a pair of link-disjoint lightpaths is established for each connection. Due to physical impairments and wavelength continuity,both the working and protection lightpaths need to be regenerated at some intermediate nodes to overcome signal quality degradation and wavelength contention. In the present paper, resource-efficient provisioning solutions are achieved with the objective of maximizing resource sharing. The authors propose a resource-sharing scheme that supports three kinds of resource-sharing scenarios, including a conventional wavelength-link sharing scenario, which shares wavelength links between protection lightpaths, and two new scenarios, which share O/E/O modules between protection lightpaths and between working and protection lightpaths. An integer linear programming (ILP)-based solution approach is used to find optimal solutions. The authors also propose a local optimization heuristic approach and a tabu search heuristic approach to solve this problem for real-world,large mesh networks. Numerical results show that our solution approaches work well under a variety of network settings and achieves a high level of resource-sharing rates (over 60% for O/E/O modules and over 30% for wavelength links), which translate into great savings in network costs.

  3. Dubai 3d Textuerd Mesh Using High Quality Resolution Vertical/oblique Aerial Imagery

    NASA Astrophysics Data System (ADS)

    Tayeb Madani, Adib; Ziad Ahmad, Abdullateef; Christoph, Lueken; Hammadi, Zamzam; Manal Abdullah Sabeal, Manal Abdullah x.

    2016-06-01

    Providing high quality 3D data with reasonable quality and cost were always essential, affording the core data and foundation for developing an information-based decision-making tool of urban environments with the capability of providing decision makers, stakeholders, professionals, and public users with 3D views and 3D analysis tools of spatial information that enables real-world views. Helps and assist in improving users' orientation and also increase their efficiency in performing their tasks related to city planning, Inspection, infrastructures, roads, and cadastre management. In this paper, the capability of multi-view Vexcel UltraCam Osprey camera images is examined to provide a 3D model of building façades using an efficient image-based modeling workflow adopted by commercial software's. The main steps of this work include: Specification, point cloud generation, and 3D modeling. After improving the initial values of interior and exterior parameters at first step, an efficient image matching technique such as Semi Global Matching (SGM) is applied on the images to generate point cloud. Then, a mesh model of points is calculated using and refined to obtain an accurate model of buildings. Finally, a texture is assigned to mesh in order to create a realistic 3D model. The resulting model has provided enough LoD2 details of the building based on visual assessment. The objective of this paper is neither comparing nor promoting a specific technique over the other and does not mean to promote a sensor-based system over another systems or mechanism presented in existing or previous paper. The idea is to share experience.

  4. Smooth Rotation Enhanced As-Rigid-As-Possible Mesh Animation.

    PubMed

    Levi, Zohar; Gotsman, Craig

    2015-02-01

    In recent years, the As-Rigid-As-Possible (ARAP) shape deformation and shape interpolation techniques gained popularity, and the ARAP energy was successfully used in other applications as well. We improve the ARAP animation technique in two aspects. First, we introduce a new ARAP-type energy, named SR-ARAP, which has a consistent discretization for surfaces (triangle meshes). The quality of our new surface deformation scheme competes with the quality of the volumetric ARAP deformation (for tetrahedral meshes). Second, we propose a new ARAP shape interpolation method that is superior to prior art also based on the ARAP energy. This method is compatible with our new SR-ARAP energy, as well as with the ARAP volume energy.

  5. Interactive point-based rendering of higher-order tetrahedral data.

    PubMed

    Zhou, Yuan; Garland, Michael

    2006-01-01

    Computational simulations frequently generate solutions defined over very large tetrahedral volume meshes containing many millions of elements. Furthermore, such solutions may often be expressed using non-linear basis functions. Certain solution techniques, such as discontinuous Galerkin methods, may even produce non-conforming meshes. Such data is difficult to visualize interactively, as it is far too large to fit in memory and many common data reduction techniques, such as mesh simplification, cannot be applied to non-conforming meshes. We introduce a point-based visualization system for interactive rendering of large, potentially non-conforming, tetrahedral meshes. We propose methods for adaptively sampling points from non-linear solution data and for decimating points at run time to fit GPU memory limits. Because these are streaming processes, memory consumption is independent of the input size. We also present an order-independent point rendering method that can efficiently render volumes on the order of 20 million tetrahedra at interactive rates.

  6. Comparison of hexahedral and tetrahedral elements in finite element analysis of the foot and footwear.

    PubMed

    Tadepalli, Srinivas C; Erdemir, Ahmet; Cavanagh, Peter R

    2011-08-11

    Finite element analysis has been widely used in the field of foot and footwear biomechanics to determine plantar pressures as well as stresses and strains within soft tissue and footwear materials. When dealing with anatomical structures such as the foot, hexahedral mesh generation accounts for most of the model development time due to geometric complexities imposed by branching and embedded structures. Tetrahedral meshing, which can be more easily automated, has been the approach of choice to date in foot and footwear biomechanics. Here we use the nonlinear finite element program Abaqus (Simulia, Providence, RI) to examine the advantages and disadvantages of tetrahedral and hexahedral elements under compression and shear loading, material incompressibility, and frictional contact conditions, which are commonly seen in foot and footwear biomechanics. This study demonstrated that for a range of simulation conditions, hybrid hexahedral elements (Abaqus C3D8H) consistently performed well while hybrid linear tetrahedral elements (Abaqus C3D4H) performed poorly. On the other hand, enhanced quadratic tetrahedral elements with improved stress visualization (Abaqus C3D10I) performed as well as the hybrid hexahedral elements in terms of contact pressure and contact shear stress predictions. Although the enhanced quadratic tetrahedral element simulations were computationally expensive compared to hexahedral element simulations in both barefoot and footwear conditions, the enhanced quadratic tetrahedral element formulation seems to be very promising for foot and footwear applications as a result of decreased labor and expedited model development, all related to facilitated mesh generation.

  7. Methods for prismatic/tetrahedral grid generation and adaptation

    NASA Technical Reports Server (NTRS)

    Kallinderis, Y.

    1995-01-01

    The present work involves generation of hybrid prismatic/tetrahedral grids for complex 3-D geometries including multi-body domains. The prisms cover the region close to each body's surface, while tetrahedra are created elsewhere. Two developments are presented for hybrid grid generation around complex 3-D geometries. The first is a new octree/advancing front type of method for generation of the tetrahedra of the hybrid mesh. The main feature of the present advancing front tetrahedra generator that is different from previous such methods is that it does not require the creation of a background mesh by the user for the determination of the grid-spacing and stretching parameters. These are determined via an automatically generated octree. The second development is a method for treating the narrow gaps in between different bodies in a multiply-connected domain. This method is applied to a two-element wing case. A High Speed Civil Transport (HSCT) type of aircraft geometry is considered. The generated hybrid grid required only 170 K tetrahedra instead of an estimated two million had a tetrahedral mesh been used in the prisms region as well. A solution adaptive scheme for viscous computations on hybrid grids is also presented. A hybrid grid adaptation scheme that employs both h-refinement and redistribution strategies is developed to provide optimum meshes for viscous flow computations. Grid refinement is a dual adaptation scheme that couples 3-D, isotropic division of tetrahedra and 2-D, directional division of prisms.

  8. Methods for prismatic/tetrahedral grid generation and adaptation

    NASA Astrophysics Data System (ADS)

    Kallinderis, Y.

    1995-10-01

    The present work involves generation of hybrid prismatic/tetrahedral grids for complex 3-D geometries including multi-body domains. The prisms cover the region close to each body's surface, while tetrahedra are created elsewhere. Two developments are presented for hybrid grid generation around complex 3-D geometries. The first is a new octree/advancing front type of method for generation of the tetrahedra of the hybrid mesh. The main feature of the present advancing front tetrahedra generator that is different from previous such methods is that it does not require the creation of a background mesh by the user for the determination of the grid-spacing and stretching parameters. These are determined via an automatically generated octree. The second development is a method for treating the narrow gaps in between different bodies in a multiply-connected domain. This method is applied to a two-element wing case. A High Speed Civil Transport (HSCT) type of aircraft geometry is considered. The generated hybrid grid required only 170 K tetrahedra instead of an estimated two million had a tetrahedral mesh been used in the prisms region as well. A solution adaptive scheme for viscous computations on hybrid grids is also presented. A hybrid grid adaptation scheme that employs both h-refinement and redistribution strategies is developed to provide optimum meshes for viscous flow computations. Grid refinement is a dual adaptation scheme that couples 3-D, isotropic division of tetrahedra and 2-D, directional division of prisms.

  9. On the application of hybrid meshes in hydraulic machinery CFD simulations

    NASA Astrophysics Data System (ADS)

    Schlipf, M.; Tismer, A.; Riedelbauch, S.

    2016-11-01

    The application of two different hybrid mesh types for the simulation of a Francis runner for automated optimization processes without user input is investigated. Those mesh types are applied to simplified test cases such as flow around NACA airfoils to identify the special mesh resolution effects with reduced complexity, like rotating cascade flows, as they occur in a turbomachine runner channel. The analysis includes the application of those different meshes on the geometries by keeping defined quality criteria and exploring the influences on the simulation results. All results are compared with reference values gained by simulations with blockstructured hexahedron meshes and the same numerical scheme. This avoids additional inaccuracies caused by further numerical and experimental measurement methods. The results show that a simulation with hybrid meshes built up by a blockstructured domain with hexahedrons around the blade in combination with a tetrahedral far field in the channel is sufficient to get results which are almost as accurate as the results gained by the reference simulation. Furthermore this method is robust enough for automated processes without user input and enables comparable meshes in size, distribution and quality for different similar geometries as occurring in optimization processes.

  10. Free Tools and Strategies for the Generation of 3D Finite Element Meshes: Modeling of the Cardiac Structures

    PubMed Central

    Pavarino, E.; Neves, L. A.; Machado, J. M.; de Godoy, M. F.; Shiyou, Y.; Momente, J. C.; Zafalon, G. F. D.; Pinto, A. R.; Valêncio, C. R.

    2013-01-01

    The Finite Element Method is a well-known technique, being extensively applied in different areas. Studies using the Finite Element Method (FEM) are targeted to improve cardiac ablation procedures. For such simulations, the finite element meshes should consider the size and histological features of the target structures. However, it is possible to verify that some methods or tools used to generate meshes of human body structures are still limited, due to nondetailed models, nontrivial preprocessing, or mainly limitation in the use condition. In this paper, alternatives are demonstrated to solid modeling and automatic generation of highly refined tetrahedral meshes, with quality compatible with other studies focused on mesh generation. The innovations presented here are strategies to integrate Open Source Software (OSS). The chosen techniques and strategies are presented and discussed, considering cardiac structures as a first application context. PMID:23762031

  11. A prospective randomised controlled trial comparing chronic groin pain and quality of life in lightweight versus heavyweight polypropylene mesh in laparoscopic inguinal hernia repair

    PubMed Central

    Prakash, Pradeep; Bansal, Virinder Kumar; Misra, Mahesh Chandra; Babu, Divya; Sagar, Rajesh; Krishna, Asuri; Kumar, Subodh; Rewari, Vimi; Subramaniam, Rajeshwari

    2016-01-01

    BACKGROUND: The aim of our study was to compare chronic groin pain and quality of life (QOL) after laparoscopic lightweight (LW) and heavyweight (HW) mesh repair for groin hernia. MATERIALS AND METHODS: One hundred and forty adult patients with uncomplicated inguinal hernia were randomised into HW mesh group or LW mesh group. Return to activity, chronic groin pain and recurrence rates were assessed. Short form-36 v2 health survey was used for QOL analysis. RESULTS: One hundred and thirty-one completed follow-up of 3 months, 66 in HW mesh group and 65 in LW mesh group. Early post-operative convalescence was better in LW mesh group in terms of early return to walking (P = 0.01) and driving (P = 0.05). The incidence of early post-operative pain, chronic groin pain and QOL and recurrences were comparable. CONCLUSION: Outcomes following laparoscopic inguinal hernia repair using HW and LW mesh are comparable in the short-term as well as long-term. PMID:27073309

  12. Acquire High Quality Meshes of Scale Models for AN Automatic Modelling Process

    NASA Astrophysics Data System (ADS)

    Giraud, F.; Jacquot, K.; Chevrier, C.; Halin, G.

    2013-07-01

    Urban scale models depicting whole towns such as the hundred-scale model collection known as plans-reliefs are a valuable source of information of cities and their surroundings. These physical representations of French strongholds from the 17th through the 19th century suffer from many problems that are, among other things, wear and tear or the lack of visibility and accessibility. A virtual collection would allow remote accessibility for visitors as well as history researchers. Moreover, it may also be linked to other digital collections and therefore, promote the collection to make people come to the museums to see the physical scale models. We also work on other physical town scale models like Epinal for which the scale is a bit higher. In a first part, we define a protocol for acquiring 3D meshes of town scale models from both photogrammetric and scanning methods. Then we compare the results of both methods The photogrammetric protocol has been elaborated by choosing the most accurate software, 123DCatch, which asks for about 60 pictures, and defining the settings needed to obtain exploitable photographs. In the same way, we defined the devices and settings needed for the laser scan acquisition method. In a second part, we segment the 3D meshes in planes by using Geomagic, which has been chosen between several programs, for its accurate resulting geometry.

  13. Color postprocessing for 3-dimensional finite element mesh quality evaluation and evolving graphical workstation

    NASA Technical Reports Server (NTRS)

    Panthaki, Malcolm J.

    1987-01-01

    Three general tasks on general-purpose, interactive color graphics postprocessing for three-dimensional computational mechanics were accomplished. First, the existing program (POSTPRO3D) is ported to a high-resolution device. In the course of this transfer, numerous enhancements are implemented in the program. The performance of the hardware was evaluated from the point of view of engineering postprocessing, and the characteristics of future hardware were discussed. Second, interactive graphical tools implemented to facilitate qualitative mesh evaluation from a single analysis. The literature was surveyed and a bibliography compiled. Qualitative mesh sensors were examined, and the use of two-dimensional plots of unaveraged responses on the surface of three-dimensional continua was emphasized in an interactive color raster graphics environment. Finally, a postprocessing environment was designed for state-of-the-art workstation technology. Modularity, personalization of the environment, integration of the engineering design processes, and the development and use of high-level graphics tools are some of the features of the intended environment.

  14. Adaptive Meshing Techniques for Viscous Flow Calculations on Mixed Element Unstructured Meshes

    NASA Technical Reports Server (NTRS)

    Mavriplis, D. J.

    1997-01-01

    An adaptive refinement strategy based on hierarchical element subdivision is formulated and implemented for meshes containing arbitrary mixtures of tetrahendra, hexahendra, prisms and pyramids. Special attention is given to keeping memory overheads as low as possible. This procedure is coupled with an algebraic multigrid flow solver which operates on mixed-element meshes. Inviscid flows as well as viscous flows are computed an adaptively refined tetrahedral, hexahedral, and hybrid meshes. The efficiency of the method is demonstrated by generating an adapted hexahedral mesh containing 3 million vertices on a relatively inexpensive workstation.

  15. Hex-dominant mesh generation using 3D constrained triangulation

    SciTech Connect

    OWEN,STEVEN J.

    2000-05-30

    A method for decomposing a volume with a prescribed quadrilateral surface mesh, into a hexahedral-dominated mesh is proposed. With this method, known as Hex-Morphing (H-Morph), an initial tetrahedral mesh is provided. Tetrahedral are transformed and combined starting from the boundary and working towards the interior of the volume. The quadrilateral faces of the hexahedra are treated as internal surfaces, which can be recovered using constrained triangulation techniques. Implementation details of the edge and face recovery process are included. Examples and performance of the H-Morph algorithm are also presented.

  16. Advanced numerical methods in mesh generation and mesh adaptation

    SciTech Connect

    Lipnikov, Konstantine; Danilov, A; Vassilevski, Y; Agonzal, A

    2010-01-01

    Numerical solution of partial differential equations requires appropriate meshes, efficient solvers and robust and reliable error estimates. Generation of high-quality meshes for complex engineering models is a non-trivial task. This task is made more difficult when the mesh has to be adapted to a problem solution. This article is focused on a synergistic approach to the mesh generation and mesh adaptation, where best properties of various mesh generation methods are combined to build efficiently simplicial meshes. First, the advancing front technique (AFT) is combined with the incremental Delaunay triangulation (DT) to build an initial mesh. Second, the metric-based mesh adaptation (MBA) method is employed to improve quality of the generated mesh and/or to adapt it to a problem solution. We demonstrate with numerical experiments that combination of all three methods is required for robust meshing of complex engineering models. The key to successful mesh generation is the high-quality of the triangles in the initial front. We use a black-box technique to improve surface meshes exported from an unattainable CAD system. The initial surface mesh is refined into a shape-regular triangulation which approximates the boundary with the same accuracy as the CAD mesh. The DT method adds robustness to the AFT. The resulting mesh is topologically correct but may contain a few slivers. The MBA uses seven local operations to modify the mesh topology. It improves significantly the mesh quality. The MBA method is also used to adapt the mesh to a problem solution to minimize computational resources required for solving the problem. The MBA has a solid theoretical background. In the first two experiments, we consider the convection-diffusion and elasticity problems. We demonstrate the optimal reduction rate of the discretization error on a sequence of adaptive strongly anisotropic meshes. The key element of the MBA method is construction of a tensor metric from hierarchical edge

  17. List-mode image reconstruction for positron emission tomography using tetrahedral voxels

    NASA Astrophysics Data System (ADS)

    Gillam, John E.; Angelis, Georgios I.; Meikle, Steven R.

    2016-09-01

    Image space decomposition based on tetrahedral voxels are interesting candidates for use in emission tomography. Tetrahedral voxels provide many of the advantages of point clouds with irregular spacing, such as being intrinsically multi-resolution, yet they also serve as a volumetric partition of the image space and so are comparable to more standard cubic voxels. Additionally, non-rigid displacement fields can be applied to the tetrahedral mesh in a straight-forward manner. So far studies incorporating tetrahedral decomposition of the image space have concentrated on pre-calculated, node-based, system matrix elements which reduces the flexibility of the tetrahedral approach and the capacity to accurately define regions of interest. Here, a list-mode on-the-fly calculation of the system matrix elements is described using a tetrahedral decomposition of the image space and volumetric elements—voxels. The algorithm is demonstrated in the context of awake animal PET which may require both rigid and non-rigid motion compensation, as well as quantification within small regions of the brain. This approach allows accurate, event based, motion compensation including non-rigid deformations.

  18. Generating quality word sense disambiguation test sets based on MeSH indexing.

    PubMed

    Fan, Jung-Wei; Friedman, Carol

    2009-11-14

    Word sense disambiguation (WSD) determines the correct meaning of a word that has more than one meaning, and is a critical step in biomedical natural language processing, as interpretation of information in text can be correct only if the meanings of their component terms are correctly identified first. Quality evaluation sets are important to WSD because they can be used as representative samples for developing automatic programs and as referees for comparing different WSD programs. To help create quality test sets for WSD, we developed a MeSH-based automatic sense-tagging method that preferentially annotates terms being topical of the text. Preliminary results were promising and revealed important issues to be addressed in biomedical WSD research. We also suggest that, by cross-validating with 2 or 3 annotators, the method should be able to efficiently generate quality WSD test sets. Online supplement is available at: http://www.dbmi.columbia.edu/~juf7002/AMIA09.

  19. Multicenter, Prospective, Longitudinal Study of the Recurrence, Surgical Site Infection, and Quality of Life After Contaminated Ventral Hernia Repair Using Biosynthetic Absorbable Mesh

    PubMed Central

    Rosen, Michael J.; Bauer, Joel J.; Harmaty, Marco; Carbonell, Alfredo M.; Cobb, William S.; Matthews, Brent; Goldblatt, Matthew I.; Selzer, Don J.; Poulose, Benjamin K.; Hansson, Bibi M. E.; Rosman, Camiel; Chao, James J.; Jacobsen, Garth R.

    2017-01-01

    Objective: The aim of the study was to evaluate biosynthetic absorbable mesh in single-staged contaminated (Centers for Disease Control class II and III) ventral hernia (CVH) repair over 24 months. Background: CVH has an increased risk of postoperative infection. CVH repair with synthetic or biologic meshes has reported chronic biomaterial infections and high hernia recurrence rates. Methods: Patients with a contaminated or clean-contaminated operative field and a hernia defect at least 9 cm2 had a biosynthetic mesh (open, sublay, retrorectus, or intraperitoneal) repair with fascial closure (n = 104). Endpoints included overall Kaplan-Meier estimates for hernia recurrence and postoperative wound infection rates at 24 months, and the EQ-5D and Short Form 12 Health Survey (SF-12). Analyses were conducted on the intent-to-treat population, and health outcome measures evaluated using paired t tests. Results: Patients had a mean age of 58 years, body mass index of 28 kg/m2, 77% had contaminated wounds, and 84% completed 24-months follow-up. Concomitant procedures included fistula takedown (n = 24) or removal of infected previously placed mesh (n = 29). Hernia recurrence rate was 17% (n = 16). At the time of CVH repair, intraperitoneal placement of the biosynthetic mesh significantly increased the risk of recurrences (P ≤ 0.04). Surgical site infections (19/104) led to higher risk of recurrence (P < 0.01). Mean 24-month EQ-5D (index and visual analogue) and SF-12 physical component and mental scores improved from baseline (P < 0.05). Conclusions: In this prospective longitudinal study, biosynthetic absorbable mesh showed efficacy in terms of long-term recurrence and quality of life for CVH repair patients and offers an alternative to biologic and permanent synthetic meshes in these complex situations. PMID:28009747

  20. Adaptive hybrid prismatic-tetrahedral grids for viscous flows

    NASA Technical Reports Server (NTRS)

    Kallinderis, Yannis; Khawaja, Aly; Mcmorris, Harlan

    1995-01-01

    The paper presents generation of adaptive hybrid prismatic/tetrahedral grids for complex 3-D geometries including multi-body domains. The prisms cover the region close to each body's surface, while tetrahedra are created elsewhere. Two developments are presented for hybrid grid generation around complex 3-D geometries. The first is a new octree/advancing front type of method for generation of the tetrahedra of the hybrid mesh. The main feature of the present advancing front tetrahedra generator that is different from previous such methods is that it does not require the creation of a background mesh by the user for the determination of the grid-spacing and stretching parameters. These are determined via an automatically generated octree. The second development is an Automatic Receding Method (ARM) for treating the narrow gaps in between different bodies in a multiply-connected domain. This method is applied to a two-element wing case. A hybrid grid adaptation scheme that employs both h-refinement and redistribution strategies is developed to provide optimum meshes for viscous flow computations. Grid refinement is a dual adaptation scheme that couples division of tetrahedra, as well as 2-D directional division of prisms.

  1. Adaptive hybrid prismatic-tetrahedral grids for viscous flows

    NASA Astrophysics Data System (ADS)

    Kallinderis, Yannis; Khawaja, Aly; McMorris, Harlan

    1995-03-01

    The paper presents generation of adaptive hybrid prismatic/tetrahedral grids for complex 3-D geometries including multi-body domains. The prisms cover the region close to each body's surface, while tetrahedra are created elsewhere. Two developments are presented for hybrid grid generation around complex 3-D geometries. The first is a new octree/advancing front type of method for generation of the tetrahedra of the hybrid mesh. The main feature of the present advancing front tetrahedra generator that is different from previous such methods is that it does not require the creation of a background mesh by the user for the determination of the grid-spacing and stretching parameters. These are determined via an automatically generated octree. The second development is an Automatic Receding Method (ARM) for treating the narrow gaps in between different bodies in a multiply-connected domain. This method is applied to a two-element wing case. A hybrid grid adaptation scheme that employs both h-refinement and redistribution strategies is developed to provide optimum meshes for viscous flow computations. Grid refinement is a dual adaptation scheme that couples division of tetrahedra, as well as 2-D directional division of prisms.

  2. Au40: A Large Tetrahedral Magic Cluster

    SciTech Connect

    Jiang, Deen; Walter, Michael

    2011-01-01

    40 is a magic number for tetrahedral symmetry predicted in both nuclear physics and the electronic jellium model. We show that Au{sub 40} could be such a magic cluster from density functional theory-based basin hopping for global minimization. The putative global minimum found for Au{sub 40} has a twisted pyramid structure, reminiscent of the famous tetrahedral Au{sub 20}, and a sizable HOMO-LUMO gap of 0.69 eV, indicating its molecular nature. Analysis of the electronic states reveals that the gap is related to shell closings of the metallic electrons in a tetrahedrally distorted effective potential.

  3. SU-D-207-04: GPU-Based 4D Cone-Beam CT Reconstruction Using Adaptive Meshing Method

    SciTech Connect

    Zhong, Z; Gu, X; Iyengar, P; Mao, W; Wang, J; Guo, X

    2015-06-15

    Purpose: Due to the limited number of projections at each phase, the image quality of a four-dimensional cone-beam CT (4D-CBCT) is often degraded, which decreases the accuracy of subsequent motion modeling. One of the promising methods is the simultaneous motion estimation and image reconstruction (SMEIR) approach. The objective of this work is to enhance the computational speed of the SMEIR algorithm using adaptive feature-based tetrahedral meshing and GPU-based parallelization. Methods: The first step is to generate the tetrahedral mesh based on the features of a reference phase 4D-CBCT, so that the deformation can be well captured and accurately diffused from the mesh vertices to voxels of the image volume. After the mesh generation, the updated motion model and other phases of 4D-CBCT can be obtained by matching the 4D-CBCT projection images at each phase with the corresponding forward projections of the deformed reference phase of 4D-CBCT. The entire process of this 4D-CBCT reconstruction method is implemented on GPU, resulting in significantly increasing the computational efficiency due to its tremendous parallel computing ability. Results: A 4D XCAT digital phantom was used to test the proposed mesh-based image reconstruction algorithm. The image Result shows both bone structures and inside of the lung are well-preserved and the tumor position can be well captured. Compared to the previous voxel-based CPU implementation of SMEIR, the proposed method is about 157 times faster for reconstructing a 10 -phase 4D-CBCT with dimension 256×256×150. Conclusion: The GPU-based parallel 4D CBCT reconstruction method uses the feature-based mesh for estimating motion model and demonstrates equivalent image Result with previous voxel-based SMEIR approach, with significantly improved computational speed.

  4. MMS Spacecraft Transition to Tetrahedral Flying Formation

    NASA Video Gallery

    In the latter half of July 2015, the four satellites of the Magnetosphere Multi-scale (MMS) mission move into their tetrahedral formation flying configuration as part of the checkout for the scienc...

  5. Octahedrality versus tetrahedrality in stoichiometric ceria nanoparticles.

    PubMed

    Migani, Annapaola; Neyman, Konstantin M; Bromley, Stefan T

    2012-05-04

    We predict that tetrahedral Ce(n)O(2n) nanoparticles <2 nm in size become more stable than those experimentally observed at larger sizes with truncated octahedral morphologies, based on global optimisation and density functional calculations.

  6. A FAST ITERATIVE METHOD FOR SOLVING THE EIKONAL EQUATION ON TETRAHEDRAL DOMAINS

    PubMed Central

    Fu, Zhisong; Kirby, Robert M.; Whitaker, Ross T.

    2014-01-01

    Generating numerical solutions to the eikonal equation and its many variations has a broad range of applications in both the natural and computational sciences. Efficient solvers on cutting-edge, parallel architectures require new algorithms that may not be theoretically optimal, but that are designed to allow asynchronous solution updates and have limited memory access patterns. This paper presents a parallel algorithm for solving the eikonal equation on fully unstructured tetrahedral meshes. The method is appropriate for the type of fine-grained parallelism found on modern massively-SIMD architectures such as graphics processors and takes into account the particular constraints and capabilities of these computing platforms. This work builds on previous work for solving these equations on triangle meshes; in this paper we adapt and extend previous two-dimensional strategies to accommodate three-dimensional, unstructured, tetrahedralized domains. These new developments include a local update strategy with data compaction for tetrahedral meshes that provides solutions on both serial and parallel architectures, with a generalization to inhomogeneous, anisotropic speed functions. We also propose two new update schemes, specialized to mitigate the natural data increase observed when moving to three dimensions, and the data structures necessary for efficiently mapping data to parallel SIMD processors in a way that maintains computational density. Finally, we present descriptions of the implementations for a single CPU, as well as multicore CPUs with shared memory and SIMD architectures, with comparative results against state-of-the-art eikonal solvers. PMID:25221418

  7. A FAST ITERATIVE METHOD FOR SOLVING THE EIKONAL EQUATION ON TETRAHEDRAL DOMAINS.

    PubMed

    Fu, Zhisong; Kirby, Robert M; Whitaker, Ross T

    2013-01-01

    Generating numerical solutions to the eikonal equation and its many variations has a broad range of applications in both the natural and computational sciences. Efficient solvers on cutting-edge, parallel architectures require new algorithms that may not be theoretically optimal, but that are designed to allow asynchronous solution updates and have limited memory access patterns. This paper presents a parallel algorithm for solving the eikonal equation on fully unstructured tetrahedral meshes. The method is appropriate for the type of fine-grained parallelism found on modern massively-SIMD architectures such as graphics processors and takes into account the particular constraints and capabilities of these computing platforms. This work builds on previous work for solving these equations on triangle meshes; in this paper we adapt and extend previous two-dimensional strategies to accommodate three-dimensional, unstructured, tetrahedralized domains. These new developments include a local update strategy with data compaction for tetrahedral meshes that provides solutions on both serial and parallel architectures, with a generalization to inhomogeneous, anisotropic speed functions. We also propose two new update schemes, specialized to mitigate the natural data increase observed when moving to three dimensions, and the data structures necessary for efficiently mapping data to parallel SIMD processors in a way that maintains computational density. Finally, we present descriptions of the implementations for a single CPU, as well as multicore CPUs with shared memory and SIMD architectures, with comparative results against state-of-the-art eikonal solvers.

  8. Tetrahedrality and hydrogen bonds in water

    NASA Astrophysics Data System (ADS)

    Székely, Eszter; Varga, Imre K.; Baranyai, András

    2016-06-01

    We carried out extensive calculations of liquid water at different temperatures and pressures using the BK3 model suggested recently [P. T. Kiss and A. Baranyai, J. Chem. Phys. 138, 204507 (2013)]. In particular, we were interested in undercooled regions to observe the propensity of water to form tetrahedral coordination of closest neighbors around a central molecule. We compared the found tetrahedral order with the number of hydrogen bonds and with the partial pair correlation functions unfolded as distributions of the closest, the second closest, etc. neighbors. We found that contrary to the number of hydrogen bonds, tetrahedrality changes substantially with state variables. Not only the number of tetrahedral arrangements increases with lowering the pressure, the density, and the temperature but the domain size of connecting tetrahedral structures as well. The difference in tetrahedrality is very pronounced between the two sides of the Widom line and even more so between the low density amorphous (LDA) and high density amorphous (HDA) phases. We observed that in liquid water and in HDA, the 5th water molecule, contrary to ice and LDA, is positioned between the first and the second coordination shell. We found no convincing evidence of structural heterogeneity or regions referring to structural transition.

  9. Finite element simulation of articular contact mechanics with quadratic tetrahedral elements.

    PubMed

    Maas, Steve A; Ellis, Benjamin J; Rawlins, David S; Weiss, Jeffrey A

    2016-03-21

    Although it is easier to generate finite element discretizations with tetrahedral elements, trilinear hexahedral (HEX8) elements are more often used in simulations of articular contact mechanics. This is due to numerical shortcomings of linear tetrahedral (TET4) elements, limited availability of quadratic tetrahedron elements in combination with effective contact algorithms, and the perceived increased computational expense of quadratic finite elements. In this study we implemented both ten-node (TET10) and fifteen-node (TET15) quadratic tetrahedral elements in FEBio (www.febio.org) and compared their accuracy, robustness in terms of convergence behavior and computational cost for simulations relevant to articular contact mechanics. Suitable volume integration and surface integration rules were determined by comparing the results of several benchmark contact problems. The results demonstrated that the surface integration rule used to evaluate the contact integrals for quadratic elements affected both convergence behavior and accuracy of predicted stresses. The computational expense and robustness of both quadratic tetrahedral formulations compared favorably to the HEX8 models. Of note, the TET15 element demonstrated superior convergence behavior and lower computational cost than both the TET10 and HEX8 elements for meshes with similar numbers of degrees of freedom in the contact problems that we examined. Finally, the excellent accuracy and relative efficiency of these quadratic tetrahedral elements was illustrated by comparing their predictions with those for a HEX8 mesh for simulation of articular contact in a fully validated model of the hip. These results demonstrate that TET10 and TET15 elements provide viable alternatives to HEX8 elements for simulation of articular contact mechanics.

  10. An assessment of the adaptive unstructured tetrahedral grid, Euler Flow Solver Code FELISA

    NASA Technical Reports Server (NTRS)

    Djomehri, M. Jahed; Erickson, Larry L.

    1994-01-01

    A three-dimensional solution-adaptive Euler flow solver for unstructured tetrahedral meshes is assessed, and the accuracy and efficiency of the method for predicting sonic boom pressure signatures about simple generic models are demonstrated. Comparison of computational and wind tunnel data and enhancement of numerical solutions by means of grid adaptivity are discussed. The mesh generation is based on the advancing front technique. The FELISA code consists of two solvers, the Taylor-Galerkin and the Runge-Kutta-Galerkin schemes, both of which are spacially discretized by the usual Galerkin weighted residual finite-element methods but with different explicit time-marching schemes to steady state. The solution-adaptive grid procedure is based on either remeshing or mesh refinement techniques. An alternative geometry adaptive procedure is also incorporated.

  11. Tetrahedral boron in naturally occurring tourmaline

    SciTech Connect

    Tagg, S.L.; Cho, H.; Dyar, M.D.; Grew, E.S.

    1999-09-01

    Evidence for boron in both trigonal and tetrahedral coordination has been found in {sup 11}B magic-angle-spinning (MAS) nuclear magnetic resonance (NMR) spectra of natural, inclusion-free specimens of aluminum-rich lithian tourmaline from granitic pregmatites.

  12. Resolvability and the Tetrahedral Configuration of Carbon.

    ERIC Educational Resources Information Center

    Kauffman, George B.

    1983-01-01

    Discusses evidence for the tetrahedral configuration of the carbon atom, indicating that three symmetrical configurations are theoretically possible for coordination number four. Includes table indicating that resolvability of compounds of type CR'R"R"'R"" is a necessary but not sufficient condition for proving tetrahedral…

  13. Near-field testing of the 5-meter model of the tetrahedral truss antenna

    NASA Technical Reports Server (NTRS)

    Kefauver, Neill; Cencich, Tom; Osborn, Jim; Osmanski, J. T.

    1986-01-01

    This report documents the technical results from near-field testing of the General Dynamics 5-meter model of the tetrahedral truss antenna at the Martin Marietta Denver Aerospace facility. A 5-meter square side of the tetrahedral served as the perimeter of the antenna, and a mesh surface and extensive surface contouring cord network was used to create a parabolic aperture shape to within an rms accuracy of 30 mils or better. Pattern measurements were made with offset feed systems radiating at frequencies of 7.73, 11.60, 2.27, and 4.26 (all in GHz). This report discusses the method of collecting the data, system measurement accuracy, the test data compiled, and diagostics and isolation of causes of pattern results. The technique of using near-field phase for measuring surface mechanical tolerances is included. Detailed far field antenna patterns and their implications are provided for all tests conducted.

  14. Near-field testing of the 5-meter model of the tetrahedral truss antenna

    NASA Astrophysics Data System (ADS)

    Kefauver, Neill; Cencich, Tom; Osborn, Jim; Osmanski, J. T.

    1986-08-01

    This report documents the technical results from near-field testing of the General Dynamics 5-meter model of the tetrahedral truss antenna at the Martin Marietta Denver Aerospace facility. A 5-meter square side of the tetrahedral served as the perimeter of the antenna, and a mesh surface and extensive surface contouring cord network was used to create a parabolic aperture shape to within an rms accuracy of 30 mils or better. Pattern measurements were made with offset feed systems radiating at frequencies of 7.73, 11.60, 2.27, and 4.26 (all in GHz). This report discusses the method of collecting the data, system measurement accuracy, the test data compiled, and diagostics and isolation of causes of pattern results. The technique of using near-field phase for measuring surface mechanical tolerances is included. Detailed far field antenna patterns and their implications are provided for all tests conducted.

  15. An Interpreted Language and System for the Visualization of Unstructured Meshes

    NASA Technical Reports Server (NTRS)

    Moran, Patrick J.; Gerald-Yamasaki, Michael (Technical Monitor)

    1998-01-01

    We present an interpreted language and system supporting the visualization of unstructured meshes and the manipulation of shapes defined in terms of mesh subsets. The language features primitives inspired by geometric modeling, mathematical morphology and algebraic topology. The adaptation of the topology ideas to an interpreted environment, along with support for programming constructs such, as user function definition, provide a flexible system for analyzing a mesh and for calculating with shapes defined in terms of the mesh. We present results demonstrating some of the capabilities of the language, based on an implementation called the Shape Calculator, for tetrahedral meshes in R^3.

  16. Search for Tetrahedral Symmetry in 70Ge

    NASA Astrophysics Data System (ADS)

    Le, Khanh; Haring-Kaye, R. A.; Elder, R. M.; Jones, K. D.; Morrow, S. I.; Tabor, S. L.; Tripathi, V.; Bender, P. C.; Allegro, P. R. P.; Medina, N. H.; Oliveira, J. R. B.; Doring, J.

    2014-09-01

    The even-even Ge isotopes have recently become an active testing ground for a variety of exotic structural characteristics, including the existence of tetrahedral symmetry (pyramid-like shapes). Although theoretical shape calculations predict the onset of tetrahedral symmetry near 72Ge, the experimental signatures (including vanishing quadrupole moments within high-spin bands) remain elusive. This study searched for possible experimental evidence of tetrahedral symmetry in 70Ge. Excited states in 70Ge were populated at Florida State University using the 55Mn(18O,p2n) fusion-evaporation reaction at 50 MeV. Prompt γ- γ coincidences were measured with a Compton-suppressed Ge array consisting of three Clover detectors and seven single-crystal detectors. The existing level scheme was enhanced through the addition of 20 new transitions and the rearrangement of five others based on the measured coincidence relations and relative intensities. Lifetimes of 24 states were measured using the Doppler-shift attenuation method, from which transition quadrupole moments were inferred. These results will be compared with those obtained from cranked Woods-Saxon calculations. The even-even Ge isotopes have recently become an active testing ground for a variety of exotic structural characteristics, including the existence of tetrahedral symmetry (pyramid-like shapes). Although theoretical shape calculations predict the onset of tetrahedral symmetry near 72Ge, the experimental signatures (including vanishing quadrupole moments within high-spin bands) remain elusive. This study searched for possible experimental evidence of tetrahedral symmetry in 70Ge. Excited states in 70Ge were populated at Florida State University using the 55Mn(18O,p2n) fusion-evaporation reaction at 50 MeV. Prompt γ- γ coincidences were measured with a Compton-suppressed Ge array consisting of three Clover detectors and seven single-crystal detectors. The existing level scheme was enhanced through the addition

  17. Parallel, Gradient-Based Anisotropic Mesh Adaptation for Re-entry Vehicle Configurations

    NASA Technical Reports Server (NTRS)

    Bibb, Karen L.; Gnoffo, Peter A.; Park, Michael A.; Jones, William T.

    2006-01-01

    Two gradient-based adaptation methodologies have been implemented into the Fun3d refine GridEx infrastructure. A spring-analogy adaptation which provides for nodal movement to cluster mesh nodes in the vicinity of strong shocks has been extended for general use within Fun3d, and is demonstrated for a 70 sphere cone at Mach 2. A more general feature-based adaptation metric has been developed for use with the adaptation mechanics available in Fun3d, and is applicable to any unstructured, tetrahedral, flow solver. The basic functionality of general adaptation is explored through a case of flow over the forebody of a 70 sphere cone at Mach 6. A practical application of Mach 10 flow over an Apollo capsule, computed with the Felisa flow solver, is given to compare the adaptive mesh refinement with uniform mesh refinement. The examples of the paper demonstrate that the gradient-based adaptation capability as implemented can give an improvement in solution quality.

  18. Multislope MUSCL method for general unstructured meshes

    NASA Astrophysics Data System (ADS)

    Le Touze, C.; Murrone, A.; Guillard, H.

    2015-03-01

    The multislope concept has been recently introduced in the literature to deal with MUSCL reconstructions on triangular and tetrahedral unstructured meshes in the finite volume cell-centered context. Dedicated scalar slopes are used to compute the interpolations on each face of a given element, in opposition to the monoslope methods in which a unique limited gradient is used. The multislope approach reveals less expensive and potentially more accurate than the classical gradient techniques. Besides, it may also help the robustness when dealing with hyperbolic systems involving complex solutions, with large discontinuities and high density ratios. However some important limitations on the mesh topology still have to be overcome with the initial multislope formalism. In this paper, a generalized multislope MUSCL method is introduced for cell-centered finite volume discretizations. The method is freed from constraints on the mesh topology, thereby operating on completely general unstructured meshes. Moreover optimal second-order accuracy is reached at the faces centroids. The scheme can be written with nonnegative coefficients, which makes it L∞-stable. Special attention has also been paid to equip the reconstruction procedure with well-adapted dedicated limiters, potentially CFL-dependent. Numerical tests are provided to prove the ability of the method to deal with completely general meshes, while exhibiting second-order accuracy.

  19. Extreme Mobility: Next Generation Tetrahedral Rovers

    NASA Astrophysics Data System (ADS)

    Clark, P. E.; Curtis, S. A.; Rilee, M. L.; Cheung, C. Y.; Wesenberg, R.; Brown, G.; Cooperrider, C.

    2007-01-01

    This paper describes the development and testing of a patented rover concept called Tetrahedral Explorer Technologies (TET), designed to provide extreme mobility and plug-and-play utility through reconfigurable addressable architecture. Here, we present the results of preliminary lab and field tests of Prototype III. Reconfigurable architecture is essential in exploration because reaching features of the great potential interest will require crossing a wide range of terrains largely inaccessible to permanently appendaged vehicles. One surface might be relatively flat and navigable, while another could be rough, variably sloping, broken, or dominated by unconsolidated debris. To be totally functional, structures must form pseudo-appendages varying in size, rate, and manner of deployment (gait) and moving at a speed approaching that of a human in rugged terrain. TET architecture is based on the tetrahedron, the basic space-filling shape, as building block. Tetrahedra are interconnected, their apices acting as nodes from which struts reversibly deploy. The tetrahedral framework acts as a simple skeletal muscular structure. Two simple robotic walker prototypes have already been developed from a single reconfigurable tetrahedron capable of tumbling. This paper presents the results of our attempts to simulate motions, improve the hardware, and develop gaits for a more evolved 12Tetrahedral Walker (Prototype 3) which high degrees of freedom locomotion commandable through a user friendly interface. Our rover is an early level mission concept, realized as an electromechanical system at present, which would allow autonomous in situ exploration of lunar sites when we return to the Moon. Such a rover could carry into inaccessible terrain an in situ analysis payload designed to provide not only details of composition of traversed terrain, but the identification of sites with resources useful for permanent bases, including water and high Ti glass.

  20. Measure of disorder in tetrahedrally bonded semiconductors

    SciTech Connect

    Sundari, S. Tripura; Raghavan, G.

    2005-06-13

    A measure of crystalline order in tetrahedrally bonded semiconductors is proposed based on optical response. This measure is obtained from the <111> critical point structure in the dielectric spectra. This descriptor is sensitive to the nature and extent of disorder in specimens and distinguishes differences in medium and short-order present in amorphous materials. Application to Ar{sup +}-irradiated Si specimens yields the threshold amorphization dose and this technique is sensitive to structural changes which occur as a function of irradiation fluence both above and beyond the amorphization threshhold. Systematic variations are also obtained in hydrogenated amorphous-Si. The general validity of the method is indicated.

  1. An evaluation of the quality of orthodontic attachment offered by single- and double-mesh bracket bases using the finite element method of stress analysis.

    PubMed

    Knox, J; Kralj, B; Hubsch, P; Middleton, J; Jones, M L

    2001-04-01

    The objective of this study was to evaluate the influence of bracket base mesh geometry on the stresses generated in the bracket-cement-tooth continuum by a shear/peel load case. A validated three-dimensional finite element model of the bracket-cement-tooth system was constructed consisting of 15,324 nodes and 2971 finite elements. Cement geometric and physical properties were held constant and bracket base geometry was varied, representing a variety of single-mesh configurations and 1 double-mesh design. For the single-mesh designs, increasing wire diameter (100-400 microm) resulted in a decrease in enamel and cement stresses. Increases in wire mesh spacing (200-750 microm) increased the major principal stress recorded in the enamel and adhesive at all wire diameters. Within the bracket, the major principal stress increased significantly at wire spacing above 400-500 microm. However, within the impregnated wire mesh (IWM), the major principal stress decreased as wire space increased. When the double-mesh bracket base was considered, the combined mesh layers resulted in a decrease in the stresses recorded in the most superficial (coarse) mesh layer and an increase in the stresses recorded in the deepest (fine mesh) layer when compared with the single-layer designs in isolation. Modification of single-mesh spacing and wire diameter influences the magnitude and distribution of stresses within the bracket-cement-tooth continuum. The use of a double-mesh design results in a reduction in the stresses recorded in the most superficial mesh. Mesh design influenced stress distribution in this study, primarily by determining the flexibility of the bracket base.

  2. Mesh generation and computational modeling techniques for bioimpedance measurements: an example using the VHP data

    NASA Astrophysics Data System (ADS)

    Danilov, A. A.; Salamatova, V. Yu; Vassilevski, Yu V.

    2012-12-01

    Here, a workflow for high-resolution efficient numerical modeling of bioimpedance measurements is suggested that includes 3D image segmentation, adaptive mesh generation, finite-element discretization, and the analysis of simulation results. Using the adaptive unstructured tetrahedral meshes enables to decrease significantly a number of mesh elements while keeping model accuracy. The numerical results illustrate current, potential, and sensitivity field distributions for a conventional Kubicek-like scheme of bioimpedance measurements using segmented geometric model of human torso based on Visible Human Project data. The whole body VHP man computational mesh is constructed that contains 574 thousand vertices and 3.3 million tetrahedrons.

  3. A unified multigrid solver for the Navier-Stokes equations on mixed element meshes

    NASA Technical Reports Server (NTRS)

    Mavriplis, D. J.; Venkatakrishnan, V.

    1995-01-01

    A unified multigrid solution technique is presented for solving the Euler and Reynolds-averaged Navier-Stokes equations on unstructured meshes using mixed elements consisting of triangles and quadrilaterals in two dimensions, and of hexahedra, pyramids, prisms, and tetrahedra in three dimensions. While the use of mixed elements is by no means a novel idea, the contribution of the paper lies in the formulation of a complete solution technique which can handle structured grids, block structured grids, and unstructured grids of tetrahedra or mixed elements without any modification. This is achieved by discretizing the full Navier-Stokes equations on tetrahedral elements, and the thin layer version of these equations on other types of elements, while using a single edge-based data-structure to construct the discretization over all element types. An agglomeration multigrid algorithm, which naturally handles meshes of any types of elements, is employed to accelerate convergence. An automatic algorithm which reduces the complexity of a given triangular or tetrahedral mesh by merging candidate triangular or tetrahedral elements into quadrilateral or prismatic elements is also described. The gains in computational efficiency afforded by the use of non-simplicial meshes over fully tetrahedral meshes are demonstrated through several examples.

  4. GPU-accelerated discontinuous Galerkin methods on hybrid meshes

    NASA Astrophysics Data System (ADS)

    Chan, Jesse; Wang, Zheng; Modave, Axel; Remacle, Jean-Francois; Warburton, T.

    2016-08-01

    We present a time-explicit discontinuous Galerkin (DG) solver for the time-domain acoustic wave equation on hybrid meshes containing vertex-mapped hexahedral, wedge, pyramidal and tetrahedral elements. Discretely energy-stable formulations are presented for both Gauss-Legendre and Gauss-Legendre-Lobatto (Spectral Element) nodal bases for the hexahedron. Stable timestep restrictions for hybrid meshes are derived by bounding the spectral radius of the DG operator using order-dependent constants in trace and Markov inequalities. Computational efficiency is achieved under a combination of element-specific kernels (including new quadrature-free operators for the pyramid), multi-rate timestepping, and acceleration using Graphics Processing Units.

  5. Conformal refinement of unstructured quadrilateral meshes

    SciTech Connect

    Garmella, Rao

    2009-01-01

    We present a multilevel adaptive refinement technique for unstructured quadrilateral meshes in which the mesh is kept conformal at all times. This means that the refined mesh, like the original, is formed of only quadrilateral elements that intersect strictly along edges or at vertices, i.e., vertices of one quadrilateral element do not lie in an edge of another quadrilateral. Elements are refined using templates based on 1:3 refinement of edges. We demonstrate that by careful design of the refinement and coarsening strategy, we can maintain high quality elements in the refined mesh. We demonstrate the method on a number of examples with dynamically changing refinement regions.

  6. Mesh for prolapse surgery: Why the fuss?

    PubMed

    Rajshekhar, Smita; Mukhopadhyay, Sambit; Klinge, Uwe

    2015-06-01

    Pelvic organ prolapse is a common gynaecological problem. Surgical techniques to repair prolapse have been constantly evolving to reduce the recurrence of prolapse and need for reoperation. Grafts made of synthetic and biological materials became popular in the last decade as they were intended to provide extra support to native tissue repairs. However, serious complications related to use of synthetic meshes have been reported and there is increasing medico-legal concern about mesh use in prolapse surgery. Some mesh products already have been withdrawn from the market and the FDA has introduced stricter surveillance of new and existing products. Large randomized studies comparing mesh with non-mesh procedures are lacking which creates uncertainty for the surgeon and their patients.The small cohorts of the RCTs available with short follow-up periods just allow the conclusion that the mesh repair can be helpful in the short to medium term but unfortunately are not able to prove safety for all patients. In particular, current clinical reports cannot define for which indication what material may be superior compared to non-mesh repair.Quality control through long-term individual and national mesh registries is needed to keep a record of all surgeons using mesh and all devices being used, monitoring their effectiveness and safety data. Meshes with better biocompatibility designed specifically for use in vaginal surgery may provide superior clinical results, where the reduction of complications may allow a wider range of indications.

  7. Update on Development of Mesh Generation Algorithms in MeshKit

    SciTech Connect

    Jain, Rajeev; Vanderzee, Evan; Mahadevan, Vijay

    2015-09-30

    MeshKit uses a graph-based design for coding all its meshing algorithms, which includes the Reactor Geometry (and mesh) Generation (RGG) algorithms. This report highlights the developmental updates of all the algorithms, results and future work. Parallel versions of algorithms, documentation and performance results are reported. RGG GUI design was updated to incorporate new features requested by the users; boundary layer generation and parallel RGG support were added to the GUI. Key contributions to the release, upgrade and maintenance of other SIGMA1 libraries (CGM and MOAB) were made. Several fundamental meshing algorithms for creating a robust parallel meshing pipeline in MeshKit are under development. Results and current status of automated, open-source and high quality nuclear reactor assembly mesh generation algorithms such as trimesher, quadmesher, interval matching and multi-sweeper are reported.

  8. Evaluation of a 3D point cloud tetrahedral tomographic reconstruction method

    PubMed Central

    Pereira, N F; Sitek, A

    2011-01-01

    Tomographic reconstruction on an irregular grid may be superior to reconstruction on a regular grid. This is achieved through an appropriate choice of the image space model, the selection of an optimal set of points and the use of any available prior information during the reconstruction process. Accordingly, a number of reconstruction-related parameters must be optimized for best performance. In this work, a 3D point cloud tetrahedral mesh reconstruction method is evaluated for quantitative tasks. A linear image model is employed to obtain the reconstruction system matrix and five point generation strategies are studied. The evaluation is performed using the recovery coefficient, as well as voxel- and template-based estimates of bias and variance measures, computed over specific regions in the reconstructed image. A similar analysis is performed for regular grid reconstructions that use voxel basis functions. The maximum likelihood expectation maximization reconstruction algorithm is used. For the tetrahedral reconstructions, of the five point generation methods that are evaluated, three use image priors. For evaluation purposes, an object consisting of overlapping spheres with varying activity is simulated. The exact parallel projection data of this object are obtained analytically using a parallel projector, and multiple Poisson noise realizations of these exact data are generated and reconstructed using the different point generation strategies. The unconstrained nature of point placement in some of the irregular mesh-based reconstruction strategies has superior activity recovery for small, low-contrast image regions. The results show that, with an appropriately generated set of mesh points, the irregular grid reconstruction methods can out-perform reconstructions on a regular grid for mathematical phantoms, in terms of the performance measures evaluated. PMID:20736496

  9. An unstructured-mesh atmospheric model for nonhydrostatic dynamics: Towards optimal mesh resolution

    NASA Astrophysics Data System (ADS)

    Szmelter, Joanna; Zhang, Zhao; Smolarkiewicz, Piotr K.

    2015-08-01

    The paper advances the limited-area anelastic model (Smolarkiewicz et al. (2013) [45]) for investigation of nonhydrostatic dynamics in mesoscale atmospheric flows. New developments include the extension to a tetrahedral-based median-dual option for unstructured meshes and a static mesh adaptivity technique using an error indicator based on inherent properties of the Multidimensional Positive Definite Advection Transport Algorithm (MPDATA). The model employs semi-implicit nonoscillatory forward-in-time integrators for soundproof PDEs, built on MPDATA and a robust non-symmetric Krylov-subspace elliptic solver. Finite-volume spatial discretisation adopts an edge-based data structure. Simulations of stratified orographic flows and the associated gravity-wave phenomena in media with uniform and variable dispersive properties verify the advancement and demonstrate the potential of heterogeneous anisotropic discretisation with large variation in spatial resolution for study of complex stratified flows that can be computationally unattainable with regular grids.

  10. Choosing corners of rectangles for mapped meshing

    SciTech Connect

    Mitchell, S.A.

    1996-12-16

    Consider mapping a regular i x j quadrilateral mesh of a rectangle onto a surface. The quality of the mapped mesh of the surface depends heavily on which vertices of the surface correspond to corners of the rectangle. The authors problem is, given an n-sided surface, chose as corners four vertices such that the surface resembles a rectangle with corners at those vertices. Note that n could be quite large, and the length and width of the rectangle, i and j, are not prespecified. In general, there is either a goal number or a prescribed number of mesh edges for each bounding curve of the surface. The goals affect the quality of the mesh, and the prescribed edges may make finding a feasible set of corners difficult. The algorithm need only work for surfaces that are roughly rectangular, particular those without large reflex angles, as otherwise an unstructured meshing algorithm is used instead. The authors report on the theory and implementation of algorithms for this problem. They also given an overview of a solution to a related problem called interval assignment: given a complex of surfaces sharing curves, globally assign the number of mesh edges or intervals for each curve such that it is possible to mesh each surface according to its prescribed quadrilateral meshing algorithm, and assigned and user-prescribed boundary mesh edges and corners. They also note a practical, constructive technique that relies on interval assignment that can generate a quadrilateral mesh of a complex of surfaces such that a compatible hexahedral mesh of the enclosed volume exists.

  11. Robust moving mesh algorithms for hybrid stretched meshes: Application to moving boundaries problems

    NASA Astrophysics Data System (ADS)

    Landry, Jonathan; Soulaïmani, Azzeddine; Luke, Edward; Ben Haj Ali, Amine

    2016-12-01

    A robust Mesh-Mover Algorithm (MMA) approach is designed to adapt meshes of moving boundaries problems. A new methodology is developed from the best combination of well-known algorithms in order to preserve the quality of initial meshes. In most situations, MMAs distribute mesh deformation while preserving a good mesh quality. However, invalid meshes are generated when the motion is complex and/or involves multiple bodies. After studying a few MMA limitations, we propose the following approach: use the Inverse Distance Weighting (IDW) function to produce the displacement field, then apply the Geometric Element Transformation Method (GETMe) smoothing algorithms to improve the resulting mesh quality, and use an untangler to revert negative elements. The proposed approach has been proven efficient to adapt meshes for various realistic aerodynamic motions: a symmetric wing that has suffered large tip bending and twisting and the high-lift components of a swept wing that has moved to different flight stages. Finally, the fluid flow problem has been solved on meshes that have moved and they have produced results close to experimental ones. However, for situations where moving boundaries are too close to each other, more improvements need to be made or other approaches should be taken, such as an overset grid method.

  12. Computer model of tetrahedral amorphous diamond

    NASA Astrophysics Data System (ADS)

    Djordjević, B. R.; Thorpe, M. F.; Wooten, F.

    1995-08-01

    We computer generate a model of amorphous diamond using the Wooten-Weaire method, with fourfold coordination everywhere. We investigate two models: one where four-membered rings are allowed and the other where the four-membered rings are forbidden; each model consisting of 4096 atoms. Starting from the perfect diamond crystalline structure, we first randomize the structure by introducing disorder through random bond switches at a sufficiently high temperature. Subsequently, the temperature is reduced in stages, and the topological and geometrical relaxation of the structure takes place using the Keating potential. After a long annealing process, a random network of comparatively low energy is obtained. We calculate the pair distribution function, mean bond angle, rms angular deviation, rms bond length, rms bond-length deviation, and ring statistics for the final relaxed structures. We minimize the total strain energy by adjusting the density of the sample. We compare our results with similar computer-generated models for amorphous silicon, and with experimental measurement of the structure factor for (predominantly tetrahedral) amorphous carbon.

  13. More About the Tetrahedral Unstructured Software System

    NASA Technical Reports Server (NTRS)

    Abdol-Hamid, Khaled S.; Frink, Neal T.; Hunter, Craig A.; Parikh, Paresh C.; Pizadeh, Shalyar Z.; Samareh, Jamshid A.; Bhat, Maharaj K.; Pandya, Mohagna J.; Grismer, Matthew J.

    2006-01-01

    TetrUSS is a comprehensive suite of computational fluid dynamics (CFD) programs that won the Software of the Year award in 1996 and has found increasing use in government, academia, and industry for solving realistic flow problems (especially in aerodynamics and aeroelastics of aircraft having complex shapes). TetrUSS includes not only programs for solving basic equations of flow but also programs that afford capabilities for efficient generation and utilization of computational grids and for graphical representation of computed flows (see figure). The 2004 version of the Tetrahedral Unstructured Software System (TetrUSS), which is one of two software systems reported in "NASA s 2004 Software of the Year," NASA Tech Briefs, Vol. 28, No. 10 (October 2004), page 18, has been improved greatly since 1996. These improvements include (1) capabilities to simulate viscous flow by solving the Navier-Stokes equations on unstructured grids, (2) portability to personal computers from diverse manufacturers, (3) advanced models of turbulence, (4) a parallel-processing version of one of the unstructured-grid Navier-Stokes-equation-solving programs, and (5) advanced programs for generating unstructured grids.

  14. Hoop/column and tetrahedral truss electromagnetic tests

    NASA Technical Reports Server (NTRS)

    Bailey, M. C.

    1987-01-01

    The distortion of antennas was measured with a metric camera system at discrete target locations on the surface. Given are surface distortion for hoop column reflector antennas, for tetrahedral truss reflector antennas, and distortion contours for the tetrahedral truss reflector. Radiation patterns at 2.27-GHz, 4.26-GHz, 7.73-GHz and 11.6-GHz are given for the hoop column antenna. Also given are radiation patterns at 4.26-GHz and 7.73-GHz for the tetrahedral truss antenna.

  15. A Triangle Mesh Standardization Method Based on Particle Swarm Optimization

    PubMed Central

    Duan, Liming; Bai, Yang; Wang, Haoyu; Shao, Hui; Zhong, Siyang

    2016-01-01

    To enhance the triangle quality of a reconstructed triangle mesh, a novel triangle mesh standardization method based on particle swarm optimization (PSO) is proposed. First, each vertex of the mesh and its first order vertices are fitted to a cubic curve surface by using least square method. Additionally, based on the condition that the local fitted surface is the searching region of PSO and the best average quality of the local triangles is the goal, the vertex position of the mesh is regulated. Finally, the threshold of the normal angle between the original vertex and regulated vertex is used to determine whether the vertex needs to be adjusted to preserve the detailed features of the mesh. Compared with existing methods, experimental results show that the proposed method can effectively improve the triangle quality of the mesh while preserving the geometric features and details of the original mesh. PMID:27509129

  16. Mesh deformation based on artificial neural networks

    NASA Astrophysics Data System (ADS)

    Stadler, Domen; Kosel, Franc; Čelič, Damjan; Lipej, Andrej

    2011-09-01

    In the article a new mesh deformation algorithm based on artificial neural networks is introduced. This method is a point-to-point method, meaning that it does not use connectivity information for calculation of the mesh deformation. Two already known point-to-point methods, based on interpolation techniques, are also presented. In contrast to the two known interpolation methods, the new method does not require a summation over all boundary nodes for one displacement calculation. The consequence of this fact is a shorter computational time of mesh deformation, which is proven by different deformation tests. The quality of the deformed meshes with all three deformation methods was also compared. Finally, the generated and the deformed three-dimensional meshes were used in the computational fluid dynamics numerical analysis of a Francis water turbine. A comparison of the analysis results was made to prove the applicability of the new method in every day computation.

  17. Integration of Mesh Optimization with 3D All-Hex Mesh Generation, LDRD Subcase 3504340000, Final Report

    SciTech Connect

    KNUPP,PATRICK; MITCHELL,SCOTT A.

    1999-11-01

    In an attempt to automatically produce high-quality all-hex meshes, we investigated a mesh improvement strategy: given an initial poor-quality all-hex mesh, we iteratively changed the element connectivity, adding and deleting elements and nodes, and optimized the node positions. We found a set of hex reconnection primitives. We improved the optimization algorithms so they can untangle a negative-Jacobian mesh, even considering Jacobians on the boundary, and subsequently optimize the condition number of elements in an untangled mesh. However, even after applying both the primitives and optimization we were unable to produce high-quality meshes in certain regions. Our experiences suggest that many boundary configurations of quadrilaterals admit no hexahedral mesh with positive Jacobians, although we have no proof of this.

  18. Exploring the basic science of prolapse meshes

    PubMed Central

    Liang, Rui; Knight, Katrina; Abramowitch, Steve; Moalli, Pamela A.

    2016-01-01

    Purpose of review Polypropylene mesh has been widely used in the surgical repair of pelvic organ prolapse. However, low but persistent rates of complications related to mesh, most commonly mesh exposure and pain, have hampered its use. Complications are higher following transvaginal implantation prompting the Food and Drug Administration to release two public health notifications warning of complications associated with transvaginal mesh use (PHN 2008 and 2011) and to upclassify transvaginal prolapse meshes from Class II to Class III devices. Although there have been numerous studies to determine the incidence and management of mesh complications as well as impact on quality of life, few studies have focused on mechanisms. Recent findings In this review, we summarize the current understanding of how mesh textile properties and mechanical behavior impact vaginal structure and function, as well as the local immune response. We also discuss how mesh properties change in response to loading. Summary We highlight a few areas of current and future research to emphasize collaborative strategies that incorporate basic science research to improve patient outcomes. PMID:27517341

  19. [The "ideal" mesh--more than a mosquito net].

    PubMed

    Klinge, U; Klink, C D; Klosterhalfen, B

    2010-04-01

    Modern meshes permit a radical treatment of hernias, an expectation that Billroth articulated already more than 100 years ago. Because clinical trials are insufficient to evaluate the distinct effects of modified mesh materials in regard to tissue biocompatibility and functionality, a basic understanding of the physico-chemical properties is essential for a rational selection of the most appropriate device. Experimental data indicate that particularly the mesh's porosity is of outstanding importance, resulting from the demanded tensile strength as well as the employed fibre material. Considering that different operation techniques require different mesh materials, specific requirements are discussed using the example of intraabdominal meshes, of parastomal meshes, of meshes in areas with bacterial contamination and of meshes in the hiatus region. Considering the late manifestation of some complications even after many years, any thorough quality control should include an assessment of explanted implant failures in addition to clinical experience.

  20. Analytical and Photogrammetric Characterization of a Planar Tetrahedral Truss

    NASA Technical Reports Server (NTRS)

    Wu, K. Chauncey; Adams, Richard R.; Rhodes, Marvin D.

    1990-01-01

    Future space science missions are likely to require near-optical quality reflectors which are supported by a stiff truss structure. This support truss should conform closely with its intended shape to minimize its contribution to the overall surface error of the reflector. The current investigation was conducted to evaluate the planar surface accuracy of a regular tetrahedral truss structure by comparing the results of predicted and measured node locations. The truss is a 2-ring hexagonal structure composed of 102 equal-length truss members. Each truss member is nominally 2 meters in length between node centers and is comprised of a graphite/epoxy tube with aluminum nodes and joints. The axial stiffness and the length variation of the truss components were determined experimentally and incorporated into a static finite element analysis of the truss. From this analysis, the root mean square (RMS) surface error of the truss was predicted to be 0.11 mm (0004 in). Photogrammetry tests were performed on the assembled truss to measure the normal displacements of the upper surface nodes and to determine if the truss would maintain its intended shape when subjected to repeated assembly. Considering the variation in the truss component lengths, the measures rms error of 0.14 mm (0.006 in) in the assembled truss is relatively small. The test results also indicate that a repeatable truss surface is achievable. Several potential sources of error were identified and discussed.

  1. Automated hexahedral meshing of anatomic structures using deformable registration.

    PubMed

    Grosland, Nicole M; Bafna, Ritesh; Magnotta, Vincent A

    2009-02-01

    This work introduces a novel method of automating the process of patient-specific finite element (FE) model development using a mapped mesh technique. The objective is to map a predefined mesh (template) of high quality directly onto a new bony surface (target) definition, thereby yielding a similar mesh with minimal user interaction. To bring the template mesh into correspondence with the target surface, a deformable registration technique based on the FE method has been adopted. The procedure has been made hierarchical allowing several levels of mesh refinement to be used, thus reducing the time required to achieve a solution. Our initial efforts have focused on the phalanx bones of the human hand. Mesh quality metrics, such as element volume and distortion were evaluated. Furthermore, the distance between the target surface and the final mapped mesh were measured. The results have satisfactorily proven the applicability of the proposed method.

  2. A peeling mesh.

    PubMed

    Bohmer, R D; Byrne, P D; Maddern, G J

    2002-07-01

    A number of different materials are available for incisional hernia repair. Benefits of the various types are controversial and are partly dependent on the anatomical placement of the mesh. Composite mesh has been introduced to provide tissue ingrowth for strength and a non-adherent side to protect the bowel, these layers being laminated together. This report is on the separation of layers in an infected mesh and adherence of the expanded polytetrafluoroethylene layer to the small bowel.

  3. A finite-element mesh generator based on growing neural networks.

    PubMed

    Triantafyllidis, D G; Labridis, D P

    2002-01-01

    A mesh generator for the production of high-quality finite-element meshes is being proposed. The mesh generator uses an artificial neural network, which grows during the training process in order to adapt itself to a prespecified probability distribution. The initial mesh is a constrained Delaunay triangulation of the domain to be triangulated. Two new algorithms to accelerate the location of the best matching unit are introduced. The mesh generator has been found able to produce meshes of high quality in a number of classic cases examined and is highly suited for problems where the mesh density vector can be calculated in advance.

  4. Analysis automation with paving: A new quadrilateral meshing technique

    SciTech Connect

    Blacker, T.D. ); Stephenson, M.B.; Canann, S. )

    1990-01-01

    This paper describes the impact of paving, a new automatic mesh generation algorithm, on the analysis portion of the design process. Paving generates an all-quadrilateral mesh in arbitrary 2D geometries. The paving technique significantly impacts the analysis process by drastically reducing the time and expertise requirements of traditional mesh generation. Paving produces a high quality mesh based on geometric boundary definitions and user specified element sizing constraints. In this paper we describe the paving algorithm, discuss varying aspects of the impact of the technique on design automation, and elaborate on current research into 3D all-hexahedral mesh generation. 11 refs., 10 figs.

  5. Mesh convergence study for hydraulic turbine draft-tube

    NASA Astrophysics Data System (ADS)

    Devals, C.; Vu, T. C.; Zhang, Y.; Dompierre, J.; Guibault, F.

    2016-11-01

    Computational flow analysis is an essential tool for hydraulic turbine designers. Grid generation is the first step in the flow analysis process. Grid quality and solution accuracy are strongly linked. Even though many studies have addressed the issue of mesh independence, there is still no definitive consensus on mesh best practices, and research on that topic is still needed. This paper presents a mesh convergence study for turbulence flow in hydraulic turbine draft- tubes which represents the most challenging turbine component for CFD predictions. The findings from this parametric study will be incorporated as mesh control rules in an in-house automatic mesh generator for turbine components.

  6. Simulation of Stagnation Region Heating in Hypersonic Flow on Tetrahedral Grids

    NASA Technical Reports Server (NTRS)

    Gnoffo, Peter A.

    2007-01-01

    Hypersonic flow simulations using the node based, unstructured grid code FUN3D are presented. Applications include simple (cylinder) and complex (towed ballute) configurations. Emphasis throughout is on computation of stagnation region heating in hypersonic flow on tetrahedral grids. Hypersonic flow over a cylinder provides a simple test problem for exposing any flaws in a simulation algorithm with regard to its ability to compute accurate heating on such grids. Such flaws predominantly derive from the quality of the captured shock. The importance of pure tetrahedral formulations are discussed. Algorithm adjustments for the baseline Roe / Symmetric, Total-Variation-Diminishing (STVD) formulation to deal with simulation accuracy are presented. Formulations of surface normal gradients to compute heating and diffusion to the surface as needed for a radiative equilibrium wall boundary condition and finite catalytic wall boundary in the node-based unstructured environment are developed. A satisfactory resolution of the heating problem on tetrahedral grids is not realized here; however, a definition of a test problem, and discussion of observed algorithm behaviors to date are presented in order to promote further research on this important problem.

  7. An Adaptive Mesh Algorithm: Mapping the Mesh Variables

    SciTech Connect

    Scannapieco, Anthony J.

    2016-07-25

    Both thermodynamic and kinematic variables must be mapped. The kinematic variables are defined on a separate kinematic mesh; it is the duel mesh to the thermodynamic mesh. The map of the kinematic variables is done by calculating the contributions of kinematic variables on the old thermodynamic mesh, mapping the kinematic variable contributions onto the new thermodynamic mesh and then synthesizing the mapped kinematic variables on the new kinematic mesh. In this document the map of the thermodynamic variables will be described.

  8. 3D-2D Deformable Image Registration Using Feature-Based Nonuniform Meshes

    PubMed Central

    Guo, Xiaohu; Cai, Yiqi; Yang, Yin; Wang, Jing; Jia, Xun

    2016-01-01

    By using prior information of planning CT images and feature-based nonuniform meshes, this paper demonstrates that volumetric images can be efficiently registered with a very small portion of 2D projection images of a Cone-Beam Computed Tomography (CBCT) scan. After a density field is computed based on the extracted feature edges from planning CT images, nonuniform tetrahedral meshes will be automatically generated to better characterize the image features according to the density field; that is, finer meshes are generated for features. The displacement vector fields (DVFs) are specified at the mesh vertices to drive the deformation of original CT images. Digitally reconstructed radiographs (DRRs) of the deformed anatomy are generated and compared with corresponding 2D projections. DVFs are optimized to minimize the objective function including differences between DRRs and projections and the regularity. To further accelerate the above 3D-2D registration, a procedure to obtain good initial deformations by deforming the volume surface to match 2D body boundary on projections has been developed. This complete method is evaluated quantitatively by using several digital phantoms and data from head and neck cancer patients. The feature-based nonuniform meshing method leads to better results than either uniform orthogonal grid or uniform tetrahedral meshes. PMID:27019849

  9. 3D-2D Deformable Image Registration Using Feature-Based Nonuniform Meshes.

    PubMed

    Zhong, Zichun; Guo, Xiaohu; Cai, Yiqi; Yang, Yin; Wang, Jing; Jia, Xun; Mao, Weihua

    2016-01-01

    By using prior information of planning CT images and feature-based nonuniform meshes, this paper demonstrates that volumetric images can be efficiently registered with a very small portion of 2D projection images of a Cone-Beam Computed Tomography (CBCT) scan. After a density field is computed based on the extracted feature edges from planning CT images, nonuniform tetrahedral meshes will be automatically generated to better characterize the image features according to the density field; that is, finer meshes are generated for features. The displacement vector fields (DVFs) are specified at the mesh vertices to drive the deformation of original CT images. Digitally reconstructed radiographs (DRRs) of the deformed anatomy are generated and compared with corresponding 2D projections. DVFs are optimized to minimize the objective function including differences between DRRs and projections and the regularity. To further accelerate the above 3D-2D registration, a procedure to obtain good initial deformations by deforming the volume surface to match 2D body boundary on projections has been developed. This complete method is evaluated quantitatively by using several digital phantoms and data from head and neck cancer patients. The feature-based nonuniform meshing method leads to better results than either uniform orthogonal grid or uniform tetrahedral meshes.

  10. Generalized mesh-based Monte Carlo for wide-field illumination and detection via mesh retessellation

    PubMed Central

    Yao, Ruoyang; Intes, Xavier; Fang, Qianqian

    2015-01-01

    Monte Carlo methods are commonly used as the gold standard in modeling photon transport through turbid media. With the rapid development of structured light applications, an accurate and efficient method capable of simulating arbitrary illumination patterns and complex detection schemes over large surface area is in great need. Here we report a generalized mesh-based Monte Carlo algorithm to support a variety of wide-field illumination methods, including spatial-frequency-domain imaging (SFDI) patterns and arbitrary 2-D patterns. The extended algorithm can also model wide-field detectors such as a free-space CCD camera. The significantly enhanced flexibility of source and detector modeling is achieved via a fast mesh retessellation process that combines the target domain and the source/detector space in a single tetrahedral mesh. Both simulations of complex domains and comparisons with phantom measurements are included to demonstrate the flexibility, efficiency and accuracy of the extended algorithm. Our updated open-source software is provided at http://mcx.space/mmc. PMID:26819826

  11. Molecular origin of auxetic behavior in tetrahedral framework silicates.

    PubMed

    Alderson, Andrew; Evans, Kenneth E

    2002-11-25

    Recent analytical models for the Poisson's ratios (nu(ij)) of tetrahedral frameworks are applied to alpha-cristobalite and alpha-quartz for the first time. Rotation and dilation of the SiO4 tetrahedral subunits are considered. Each mechanism leads to negative nu(31) values, whereas negative and positive values are possible when they act concurrently. The concurrent model is in excellent agreement with experiment and explains the dichotomy between negative and positive nu(31) values in alpha-cristobalite and alpha-quartz, respectively. The predicted strain-dependent trends confirm those from molecular modeling.

  12. Prolene mesh mentoplasty.

    PubMed

    Ilhan, A Emre; Kayabasoglu, Gurkan; Kazikdas, K Cagdas; Goksel, Abdulkadir

    2011-04-01

    Augmentation mentoplasty is a cosmetic surgical procedure to correct chin retrusion or microgenia which usually requires placement of an alloplastic material over the pogonion, and which results in increased chin projection and a more aesthetically balanced facial profile. Polypropylene mesh is easy to purchase, widely available in a general hospital and most commonly used by general surgeons. In this series of 192 patients, we wanted to demonstrate our simple mentoplasty technique using prolene mesh that can easily be combined with a rhinoplasty procedure, with possible causes of infection and the rationale for using prolene mesh in such procedures.

  13. Optimized testing of meshes

    NASA Technical Reports Server (NTRS)

    Malek, Miroslaw; Ozden, Banu

    1990-01-01

    Efficient testing techniques for two-dimensional mesh interconnection networks are presented. The tests cover faults in the arbitration logic of the switches; this includes an examination of fault detection in the data paths, routing, and control circuitry, including the conflict resolution capabilities of mesh interconnection networks using topological test methods. The proposed methods are not implementation specific and can be applied to any design with a mesh topology. The topology and behavior of the network are described and definitions are presented. The fault model is defined and parallel testing methods for the entire network are given.

  14. Mesh implants: An overview of crucial mesh parameters

    PubMed Central

    Zhu, Lei-Ming; Schuster, Philipp; Klinge, Uwe

    2015-01-01

    Hernia repair is one of the most frequently performed surgical interventions that use mesh implants. This article evaluates crucial mesh parameters to facilitate selection of the most appropriate mesh implant, considering raw materials, mesh composition, structure parameters and mechanical parameters. A literature review was performed using the PubMed database. The most important mesh parameters in the selection of a mesh implant are the raw material, structural parameters and mechanical parameters, which should match the physiological conditions. The structural parameters, especially the porosity, are the most important predictors of the biocompatibility performance of synthetic meshes. Meshes with large pores exhibit less inflammatory infiltrate, connective tissue and scar bridging, which allows increased soft tissue ingrowth. The raw material and combination of raw materials of the used mesh, including potential coatings and textile design, strongly impact the inflammatory reaction to the mesh. Synthetic meshes made from innovative polymers combined with surface coating have been demonstrated to exhibit advantageous behavior in specialized fields. Monofilament, large-pore synthetic meshes exhibit advantages. The value of mesh classification based on mesh weight seems to be overestimated. Mechanical properties of meshes, such as anisotropy/isotropy, elasticity and tensile strength, are crucial parameters for predicting mesh performance after implantation. PMID:26523210

  15. Urogynecologic Surgical Mesh Implants

    MedlinePlus

    ... urogynecologic repair. Absorbable mesh will degrade and lose strength over time. It is not intended to provide long-term reinforcement to the repair site. As the material degrades, new tissue growth is intended to provide ...

  16. Hernia Surgical Mesh Implants

    MedlinePlus

    ... repaired hernia. Absorbable mesh will degrade and lose strength over time. It is not intended to provide long-term reinforcement to the repair site. As the material degrades, new tissue growth is intended to provide ...

  17. Gear mesh stiffness and load sharing in planetary gearing

    NASA Technical Reports Server (NTRS)

    Kasuba, R.; August, R.

    1984-01-01

    An interactive computerized analysis was developed for determining load sharing among planetary gears. The load sharing is established as a function of transmitted torque, degree of sun gear fixity, component flexibility, gear tooth quality, and phasing of individual planet gears. A nonlinear variable gear tooth mesh stiffness model was used to simulate the sun/plant and planet/ring gear meshes. The determined load sharing and gear mesh stiffness parameters then can be used for the subsequent assessment of dynamic load factors.

  18. 2D Mesh Manipulation

    DTIC Science & Technology

    2011-11-01

    PLATE A two-dimensional flat plate mesh was created using the Gridgen software package (Ref. 13). This mesh (shown in Fig. 10) closely resembled a...desired tolerance of the projection onto the surface. The geometry file on which the geometry surface is based can be easily generated using Gridgen ...by exporting a curve (or number of curves) under the INPUT/OUTPUT commands in the Gridgen interface (Ref. 13). Initially, the floating boundary

  19. Wireless Mesh Networks

    NASA Astrophysics Data System (ADS)

    Ishmael, Johnathan; Race, Nicholas

    Wireless Mesh Networks have emerged as an important technology in building next-generation networks. They are seen to have a range of benefits over traditional wired and wireless networks including low deployment costs, high scalability and resiliency to faults. Moreover, Wireless Mesh Networks (WMNs) are often described as being autonomic with self-* (healing and configuration) properties and their popularity has grown both as a research platform and as a commercially exploitable technology.

  20. Indirect-drive radiation uniformity in tetrahedral hohlraums

    SciTech Connect

    Schnittman, J.D.; Craxton, R.S.

    1996-10-01

    Tetrahedral hohlraums, by which are understood spherical hohlraums with four laser entrance holes (LEH{close_quote}s) placed at or near the vertices of a tetrahedron, are proposed for the National Ignition Facility (NIF) [J. Lindl, Phys. Plasmas {bold 2}, 3933 (1995)] and the upgraded OMEGA laser [T. R. Boehly {ital et} {ital al}., Rev. Sci. Instrum. {bold 66}, 508 (1995)]. All but four of the 48 NIF beams can irradiate a tetrahedral hohlraum, assuming that 72 beam ports are provided to accommodate direct drive. On OMEGA, the target chamber provides an exact tetrahedral symmetry, permitting the irradiation of tetrahedral hohlraums with all 60 beams. Hohlraum designs are optimized using a new three-dimensional view-factor program called Buttercup, which traces all beam paths through the hohlraum and calculates the radiation flux on the capsule for different values of the albedo. Good irradiation uniformity ({approximately}2{percent} rms) can be obtained on the capsule at all times during the implosion, even with identical beam temporal histories, in contrast to the case of cylindrical hohlraums where {open_quote}{open_quote}beam phasing{close_quote}{close_quote} is needed. {copyright} {ital 1996 American Institute of Physics.}

  1. Indirect-drive radiation uniformity in tetrahedral hohlraums

    NASA Astrophysics Data System (ADS)

    Schnittman, J. D.; Craxton, R. S.

    1996-10-01

    Tetrahedral hohlraums, by which are understood spherical hohlraums with four laser entrance holes (LEH's) placed at or near the vertices of a tetrahedron, are proposed for the National Ignition Facility (NIF) [J. Lindl, Phys. Plasmas 2, 3933 (1995)] and the upgraded OMEGA laser [T. R. Boehly et al., Rev. Sci. Instrum. 66, 508 (1995)]. All but four of the 48 NIF beams can irradiate a tetrahedral hohlraum, assuming that 72 beam ports are provided to accommodate direct drive. On OMEGA, the target chamber provides an exact tetrahedral symmetry, permitting the irradiation of tetrahedral hohlraums with all 60 beams. Hohlraum designs are optimized using a new three-dimensional view-factor program called Buttercup, which traces all beam paths through the hohlraum and calculates the radiation flux on the capsule for different values of the albedo. Good irradiation uniformity (˜2% rms) can be obtained on the capsule at all times during the implosion, even with identical beam temporal histories, in contrast to the case of cylindrical hohlraums where ``beam phasing'' is needed.

  2. Hinge specification for a square-faceted tetrahedral truss

    NASA Technical Reports Server (NTRS)

    Adams, L. R.

    1984-01-01

    A square-faceted tetrahedral truss is geometrically analyzed. Expressions are developed for single degree of freedom hinges which allow packaging of the structure into a configuration in which all members are parallel and closely packed in a square pattern. Deployment is sequential, thus providing control over the structure during deployment.

  3. Tetrahedral Models of Learning: Application to College Reading.

    ERIC Educational Resources Information Center

    Nist, Sherrie L.

    J. D. Bransford's tetrahedral model of learning considers four variables: (1) learning activities, (2) characteristics of the learner, (3) criterial tasks, and (4) the nature of the materials. Bransford's model provides a research-based theoretical framework that can be used to teach, model, and have students apply a variety of study strategies to…

  4. Fiber-mesh photonic molecule

    NASA Astrophysics Data System (ADS)

    Mishra, Subodha; Satpathy, Sashi

    2008-03-01

    Analogous to the photonic crystal, we introduce the concept of a fiber-mesh photonic molecule made up of optical fibers and study its transmission characteristics. We consider a specific example of a photonic molecule, inspired by the well-known C60 molecule, with the arms of the molecule formed out of single-moded optical fibers. The transmittance consists of sharp peaks determined by the pole structure of the scattering matrix in the complex energy plane. A molecule can be designed to control the positions and the widths of the transmission peaks, opening up the possibility of building new photonic devices such as high quality band-pass filters.

  5. Unconstrained plastering : all-hexahedral mesh generation via advancing front geometry decomposition (2004-2008).

    SciTech Connect

    Blacker, Teddy Dean; Staten, Matthew L.; Kerr, Robert A.; Owen, Steven James

    2010-03-01

    The generation of all-hexahedral finite element meshes has been an area of ongoing research for the past two decades and remains an open problem. Unconstrained plastering is a new method for generating all-hexahedral finite element meshes on arbitrary volumetric geometries. Starting from an unmeshed volume boundary, unconstrained plastering generates the interior mesh topology without the constraints of a pre-defined boundary mesh. Using advancing fronts, unconstrained plastering forms partially defined hexahedral dual sheets by decomposing the geometry into simple shapes, each of which can be meshed with simple meshing primitives. By breaking from the tradition of previous advancing-front algorithms, which start from pre-meshed boundary surfaces, unconstrained plastering demonstrates that for the tested geometries, high quality, boundary aligned, orientation insensitive, all-hexahedral meshes can be generated automatically without pre-meshing the boundary. Examples are given for meshes from both solid mechanics and geotechnical applications.

  6. Is there tetrahedral Fe/sup 3 +/ in biotite

    SciTech Connect

    Dyar, M.D.; Burns, R.G.; Rossman, G.R.

    1985-01-01

    Tetrahedral Fe/sup 3 +/ has been observed in Moessbauer and optical studies of Al-deficient micas, including synthetic ferri-annites, annites from banded iron formations and phlogopites from deep-seated rocks. In such samples Si + Al < 4 (per 11 0), and 0.10-0.67 formula units of Fe/sup 3 +/ fill the tetrahedral sites in the structure. The authors also discovered several Al-rich biotites which contain small amounts of Fe/sub tet//sup 3 +/ based on their spectroscopic data. Fe/sup 3 +/ appears to be displacing some of the Al/sup 3 +/ into the octahedral site. Examination of the literature shows nine other cases of Fe/sub tet//sup 3 +/ in trioctahedral 1M micas where Si + Al > 4. Traditionally, the effects of cation substitutions on the physical properties have been considered to be dependent on the size difference between the octahedral and tetrahedral layers of the structure. Much attention has focused on the substitution of the larger Fe/sup 2 +/ for Mg/sup 2 +/ and other cations in the octahedra of relatively simple synthetic compositions. However, in the natural micas studied here high fO/sub 2/ and high proportions of Al/sup 3 +/, Fe/sup 3 +/, and Ti/sup 4 +/ in the compositions raise the issue of structural readjustments based on substitution of small cations into the structure. In our samples, the average octahedral cation size is 0.67 A. If many small octahedral cations are incorporated into the structure during biotite formation, considerable octahedral flattening and (in response) tetrahedral rotation must occur to stabilize the mica. Perhaps the high degree of tetrahedral rotation allows accommodation of the larger Fe/sub tet//sup 3 +/ instead of Al/sub tet//sup 3 +/.

  7. Airplane Mesh Development with Grid Density Studies

    NASA Technical Reports Server (NTRS)

    Cliff, Susan E.; Baker, Timothy J.; Thomas, Scott D.; Lawrence, Scott L.; Rimlinger, Mark J.

    1999-01-01

    Automatic Grid Generation Wish List Geometry handling, including CAD clean up and mesh generation, remains a major bottleneck in the application of CFD methods. There is a pressing need for greater automation in several aspects of the geometry preparation in order to reduce set up time and eliminate user intervention as much as possible. Starting from the CAD representation of a configuration, there may be holes or overlapping surfaces which require an intensive effort to establish cleanly abutting surface patches, and collections of many patches may need to be combined for more efficient use of the geometrical representation. Obtaining an accurate and suitable body conforming grid with an adequate distribution of points throughout the flow-field, for the flow conditions of interest, is often the most time consuming task for complex CFD applications. There is a need for a clean unambiguous definition of the CAD geometry. Ideally this would be carried out automatically by smart CAD clean up software. One could also define a standard piece-wise smooth surface representation suitable for use by computational methods and then create software to translate between the various CAD descriptions and the standard representation. Surface meshing remains a time consuming, user intensive procedure. There is a need for automated surface meshing, requiring only minimal user intervention to define the overall density of mesh points. The surface mesher should produce well shaped elements (triangles or quadrilaterals) whose size is determined initially according to the surface curvature with a minimum size for flat pieces, and later refined by the user in other regions if necessary. Present techniques for volume meshing all require some degree of user intervention. There is a need for fully automated and reliable volume mesh generation. In addition, it should be possible to create both surface and volume meshes that meet guaranteed measures of mesh quality (e.g. minimum and maximum

  8. Global Load Balancing with Parallel Mesh Adaption on Distributed-Memory Systems

    NASA Technical Reports Server (NTRS)

    Biswas, Rupak; Oliker, Leonid; Sohn, Andrew

    1996-01-01

    Dynamic mesh adaption on unstructured grids is a powerful tool for efficiently computing unsteady problems to resolve solution features of interest. Unfortunately, this causes load imbalance among processors on a parallel machine. This paper describes the parallel implementation of a tetrahedral mesh adaption scheme and a new global load balancing method. A heuristic remapping algorithm is presented that assigns partitions to processors such that the redistribution cost is minimized. Results indicate that the parallel performance of the mesh adaption code depends on the nature of the adaption region and show a 35.5X speedup on 64 processors of an SP2 when 35% of the mesh is randomly adapted. For large-scale scientific computations, our load balancing strategy gives almost a sixfold reduction in solver execution times over non-balanced loads. Furthermore, our heuristic remapper yields processor assignments that are less than 3% off the optimal solutions but requires only 1% of the computational time.

  9. Global Load Balancing with Parallel Mesh Adaption on Distributed-Memory Systems

    NASA Technical Reports Server (NTRS)

    Biswas, Rupak; Oliker, Leonid; Sohn, Andrew

    1996-01-01

    Dynamic mesh adaptation on unstructured grids is a powerful tool for efficiently computing unsteady problems to resolve solution features of interest. Unfortunately, this causes load inbalances among processors on a parallel machine. This paper described the parallel implementation of a tetrahedral mesh adaption scheme and a new global load balancing method. A heuristic remapping algorithm is presented that assigns partitions to processors such that the redistribution coast is minimized. Results indicate that the parallel performance of the mesh adaption code depends on the nature of the adaption region and show a 35.5X speedup on 64 processors of an SP2 when 35 percent of the mesh is randomly adapted. For large scale scientific computations, our load balancing strategy gives an almost sixfold reduction in solver execution times over non-balanced loads. Furthermore, our heuristic remappier yields processor assignments that are less than 3 percent of the optimal solutions, but requires only 1 percent of the computational time.

  10. Unstructured mesh generation and adaptivity

    NASA Technical Reports Server (NTRS)

    Mavriplis, D. J.

    1995-01-01

    An overview of current unstructured mesh generation and adaptivity techniques is given. Basic building blocks taken from the field of computational geometry are first described. Various practical mesh generation techniques based on these algorithms are then constructed and illustrated with examples. Issues of adaptive meshing and stretched mesh generation for anisotropic problems are treated in subsequent sections. The presentation is organized in an education manner, for readers familiar with computational fluid dynamics, wishing to learn more about current unstructured mesh techniques.

  11. Adaptive mesh refinement for time-domain electromagnetics using vector finite elements :a feasibility study.

    SciTech Connect

    Turner, C. David; Kotulski, Joseph Daniel; Pasik, Michael Francis

    2005-12-01

    This report investigates the feasibility of applying Adaptive Mesh Refinement (AMR) techniques to a vector finite element formulation for the wave equation in three dimensions. Possible error estimators are considered first. Next, approaches for refining tetrahedral elements are reviewed. AMR capabilities within the Nevada framework are then evaluated. We summarize our conclusions on the feasibility of AMR for time-domain vector finite elements and identify a path forward.

  12. Quality Control of Trichinella Testing at the Slaughterhouse Laboratory: Evaluation of the Use of a 400-Micrometer-Mesh-Size Sieve in the Magnetic Stirrer Method.

    PubMed

    Franssen, Frits; van Andel, Esther; Swart, Arno; van der Giessen, Joke

    2016-02-01

    The performance of a 400-μm-mesh-size sieve (sieve400) has not previously been compared with that of a 180-μm-mesh-size sieve (sieve180). Using pork samples spiked with 0 to 10 Trichinella muscle larvae and an artificial digestion method, sieve performance was evaluated for control of Trichinella in meat-producing animals. The use of a sieve400 resulted in 12% lower larval counts, 147% more debris, and 28% longer counting times compared with the use of a sieve180. Although no false-negative results were obtained, prolonged counting times with the sieve400 may have an impact on performance in a high-throughput environment such as a slaughterhouse laboratory. Based on our results, the sieve180 remains the sieve of choice for Trichinella control in meat in slaughterhouse laboratories, according to the European Union reference method (European Commission regulation 2075/2005). Furthermore, the results of the present study contribute to the discussion of harmonization of meat inspection requirements among countries.

  13. Documentation for MeshKit - Reactor Geometry (&mesh) Generator

    SciTech Connect

    Jain, Rajeev; Mahadevan, Vijay

    2015-09-30

    This report gives documentation for using MeshKit’s Reactor Geometry (and mesh) Generator (RGG) GUI and also briefly documents other algorithms and tools available in MeshKit. RGG is a program designed to aid in modeling and meshing of complex/large hexagonal and rectilinear reactor cores. RGG uses Argonne’s SIGMA interfaces, Qt and VTK to produce an intuitive user interface. By integrating a 3D view of the reactor with the meshing tools and combining them into one user interface, RGG streamlines the task of preparing a simulation mesh and enables real-time feedback that reduces accidental scripting mistakes that could waste hours of meshing. RGG interfaces with MeshKit tools to consolidate the meshing process, meaning that going from model to mesh is as easy as a button click. This report is designed to explain RGG v 2.0 interface and provide users with the knowledge and skills to pilot RGG successfully. Brief documentation of MeshKit source code, tools and other algorithms available are also presented for developers to extend and add new algorithms to MeshKit. RGG tools work in serial and parallel and have been used to model complex reactor core models consisting of conical pins, load pads, several thousands of axially varying material properties of instrumentation pins and other interstices meshes.

  14. Cosmology on a Mesh

    NASA Astrophysics Data System (ADS)

    Gill, Stuart P. D.; Knebe, Alexander; Gibson, Brad K.; Flynn, Chris; Ibata, Rodrigo A.; Lewis, Geraint F.

    2003-04-01

    An adaptive multi grid approach to simulating the formation of structure from collisionless dark matter is described. MLAPM (Multi-Level Adaptive Particle Mesh) is one of the most efficient serial codes available on the cosmological "market" today. As part of Swinburne University's role in the development of the Square Kilometer Array, we are implementing hydrodynamics, feedback, and radiative transfer within the MLAPM adaptive mesh, in order to simulate baryonic processes relevant to the interstellar and intergalactic media at high redshift. We will outline our progress to date in applying the existing MLAPM to a study of the decay of satellite galaxies within massive host potentials.

  15. Interactive isosurface ray tracing of time-varying tetrahedral volumes.

    PubMed

    Wald, Ingo; Friedrich, Heiko; Knoll, Aaron; Hansen, Charles D

    2007-01-01

    We describe a system for interactively rendering isosurfaces of tetrahedral finite-element scalar fields using coherent ray tracing techniques on the CPU. By employing state-of-the art methods in polygonal ray tracing, namely aggressive packet/frustum traversal of a bounding volume hierarchy, we can accomodate large and time-varying unstructured data. In conjunction with this efficiency structure, we introduce a novel technique for intersecting ray packets with tetrahedral primitives. Ray tracing is flexible, allowing for dynamic changes in isovalue and time step, visualization of multiple isosurfaces, shadows, and depth-peeling transparency effects. The resulting system offers the intuitive simplicity of isosurfacing, guaranteed-correct visual results, and ultimately a scalable, dynamic and consistently interactive solution for visualizing unstructured volumes.

  16. Coarse-grained theory of a realistic tetrahedral liquid model

    NASA Astrophysics Data System (ADS)

    Procaccia, I.; Regev, I.

    2012-02-01

    Tetrahedral liquids such as water and silica-melt show unusual thermodynamic behavior such as a density maximum and an increase in specific heat when cooled to low temperatures. Previous work had shown that Monte Carlo and mean-field solutions of a lattice model can exhibit these anomalous properties with or without a phase transition, depending on the values of the different terms in the Hamiltonian. Here we use a somewhat different approach, where we start from a very popular empirical model of tetrahedral liquids —the Stillinger-Weber model— and construct a coarse-grained theory which directly quantifies the local structure of the liquid as a function of volume and temperature. We compare the theory to molecular-dynamics simulations and show that the theory can rationalize the simulation results and the anomalous behavior.

  17. A Trivariate Clough-Tocher Scheme for Tetrahedral Data.

    DTIC Science & Technology

    1984-06-01

    data, for arbitrary m and in arbitrarily many variables. However, all of the existing tetrahedral schemes yield rational interpolants . One would like...from the cardinal properties of barycentric coordinates that =bk 6 5 _ bki (2.3) where 6 is the Kronecker delta. The piecewise cubic interpolant (on a...1984 Abstract -An interpolation scheme is described for values of position, gradient and Hessian at scattered points in three variables. The domain is

  18. Detection and accumulation of tetrahedral intermediates in elastase catalysis.

    PubMed Central

    Fink, A L; Meehan, P

    1979-01-01

    Tetrahedral intermediates in the reaction of elastase with specific di- and tripeptide p-nitroanilide substrates have been detected, accumulated, and stabilized at high pH by using subzero temperatures and fluid aqueous/organic cryosolvents. The tetrahedral adducts are characterized by spectra with lambda max of 359 +/- 2 nm, compared with thata of 380 nm for p-nitroaniline and 315-320 nm for the substrates. The maximal concentration of intermediate that could be accumulated varied with the different substrates from 40 to 100% of the active enzyme present. The pH dependence of the reactions indicated that formation of the tetrahedral intermediates was rate-limiting at low pH (pK* = 7.0 at -39 degrees C) and that collapse to the acylenzymes was rate-determining at high pH. When corrected for the effect of temperature and cosolvent, the rate of intermediate formation was in good agreement with that measured at 25 degrees C in aqueous solution by stopped-flow techniques. PMID:36609

  19. Output-Adaptive Tetrahedral Cut-Cell Validation for Sonic Boom Prediction

    NASA Technical Reports Server (NTRS)

    Park, Michael A.; Darmofal, David L.

    2008-01-01

    A cut-cell approach to Computational Fluid Dynamics (CFD) that utilizes the median dual of a tetrahedral background grid is described. The discrete adjoint is also calculated, which permits adaptation based on improving the calculation of a specified output (off-body pressure signature) in supersonic inviscid flow. These predicted signatures are compared to wind tunnel measurements on and off the configuration centerline 10 body lengths below the model to validate the method for sonic boom prediction. Accurate mid-field sonic boom pressure signatures are calculated with the Euler equations without the use of hybrid grid or signature propagation methods. Highly-refined, shock-aligned anisotropic grids were produced by this method from coarse isotropic grids created without prior knowledge of shock locations. A heuristic reconstruction limiter provided stable flow and adjoint solution schemes while producing similar signatures to Barth-Jespersen and Venkatakrishnan limiters. The use of cut-cells with an output-based adaptive scheme completely automated this accurate prediction capability after a triangular mesh is generated for the cut surface. This automation drastically reduces the manual intervention required by existing methods.

  20. Toward An Unstructured Mesh Database

    NASA Astrophysics Data System (ADS)

    Rezaei Mahdiraji, Alireza; Baumann, Peter Peter

    2014-05-01

    Unstructured meshes are used in several application domains such as earth sciences (e.g., seismology), medicine, oceanography, cli- mate modeling, GIS as approximate representations of physical objects. Meshes subdivide a domain into smaller geometric elements (called cells) which are glued together by incidence relationships. The subdivision of a domain allows computational manipulation of complicated physical structures. For instance, seismologists model earthquakes using elastic wave propagation solvers on hexahedral meshes. The hexahedral con- tains several hundred millions of grid points and millions of hexahedral cells. Each vertex node in the hexahedrals stores a multitude of data fields. To run simulation on such meshes, one needs to iterate over all the cells, iterate over incident cells to a given cell, retrieve coordinates of cells, assign data values to cells, etc. Although meshes are used in many application domains, to the best of our knowledge there is no database vendor that support unstructured mesh features. Currently, the main tool for querying and manipulating unstructured meshes are mesh libraries, e.g., CGAL and GRAL. Mesh li- braries are dedicated libraries which includes mesh algorithms and can be run on mesh representations. The libraries do not scale with dataset size, do not have declarative query language, and need deep C++ knowledge for query implementations. Furthermore, due to high coupling between the implementations and input file structure, the implementations are less reusable and costly to maintain. A dedicated mesh database offers the following advantages: 1) declarative querying, 2) ease of maintenance, 3) hiding mesh storage structure from applications, and 4) transparent query optimization. To design a mesh database, the first challenge is to define a suitable generic data model for unstructured meshes. We proposed ImG-Complexes data model as a generic topological mesh data model which extends incidence graph model to multi

  1. Fast Dynamic Meshing Method Based on Delaunay Graph and Inverse Distance Weighting Interpolation

    NASA Astrophysics Data System (ADS)

    Wang, Yibin; Qin, Ning; Zhao, Ning

    2016-06-01

    A novel mesh deformation technique is developed based on the Delaunay graph mapping method and the inverse distance weighting (IDW) interpolation. The algorithm maintains the advantages of the efficiency of Delaunay-graph-mapping mesh deformation while possess the ability for better controlling the near surface mesh quality. The Delaunay graph is used to divide the mesh domain into a number of sub-domains. On each of the sub-domains, the inverse distance weighting interpolation is applied to build a much smaller sized translation matrix between the original mesh and the deformed mesh, resulting a similar efficiency for the mesh deformation as compared to the fast Delaunay graph mapping method. The paper will show how the near-wall mesh quality is controlled and improved by the new method while the computational time is compared with the original Delaunay graph mapping method.

  2. Hexahedral mesh generation via the dual arrangement of surfaces

    SciTech Connect

    Mitchell, S.A.; Tautges, T.J.

    1997-12-31

    Given a general three-dimensional geometry with a prescribed quadrilateral surface mesh, the authors consider the problem of constructing a hexahedral mesh of the geometry whose boundary is exactly the prescribed surface mesh. Due to the specialized topology of hexahedra, this problem is more difficult than the analogous one for tetrahedra. Folklore has maintained that a surface mesh must have a constrained structure in order for there to exist a compatible hexahedral mesh. However, they have proof that a surface mesh need only satisfy mild parity conditions, depending on the topology of the three-dimensional geometry, for there to exist a compatible hexahedral mesh. The proof is based on the realization that a hexahedral mesh is dual to an arrangement of surfaces, and the quadrilateral surface mesh is dual to the arrangement of curves bounding these surfaces. The proof is constructive and they are currently developing an algorithm called Whisker Weaving (WW) that mirrors the proof steps. Given the bounding curves, WW builds the topological structure of an arrangement of surfaces having those curves as its boundary. WW progresses in an advancing front manner. Certain local rules are applied to avoid structures that lead to poor mesh quality. Also, after the arrangement is constructed, additional surfaces are inserted to separate features, so e.g., no two hexahedra share more than one quadrilateral face. The algorithm has generated meshes for certain non-trivial problems, but is currently unreliable. The authors are exploring strategies for consistently selecting which portion of the surface arrangement to advance based on the existence proof. This should lead us to a robust algorithm for arbitrary geometries and surface meshes.

  3. Surgical mesh for ventral incisional hernia repairs: Understanding mesh design

    PubMed Central

    Rastegarpour, Ali; Cheung, Michael; Vardhan, Madhurima; Ibrahim, Mohamed M; Butler, Charles E; Levinson, Howard

    2016-01-01

    Surgical mesh has become an indispensable tool in hernia repair to improve outcomes and reduce costs; however, efforts are constantly being undertaken in mesh development to overcome postoperative complications. Common complications include infection, pain, adhesions, mesh extrusion and hernia recurrence. Reducing the complications of mesh implantation is of utmost importance given that hernias occur in hundreds of thousands of patients per year in the United States. In the present review, the authors present the different types of hernia meshes, discuss the key properties of mesh design, and demonstrate how each design element affects performance and complications. The present article will provide a basis for surgeons to understand which mesh to choose for patient care and why, and will explain the important technological aspects that will continue to evolve over the ensuing years. PMID:27054138

  4. To mesh or not to mesh: a review of pelvic organ reconstructive surgery

    PubMed Central

    Dällenbach, Patrick

    2015-01-01

    Pelvic organ prolapse (POP) is a major health issue with a lifetime risk of undergoing at least one surgical intervention estimated at close to 10%. In the 1990s, the risk of reoperation after primary standard vaginal procedure was estimated to be as high as 30% to 50%. In order to reduce the risk of relapse, gynecological surgeons started to use mesh implants in pelvic organ reconstructive surgery with the emergence of new complications. Recent studies have nevertheless shown that the risk of POP recurrence requiring reoperation is lower than previously estimated, being closer to 10% rather than 30%. The development of mesh surgery – actively promoted by the marketing industry – was tremendous during the past decade, and preceded any studies supporting its benefit for our patients. Randomized trials comparing the use of mesh to native tissue repair in POP surgery have now shown better anatomical but similar functional outcomes, and meshes are associated with more complications, in particular for transvaginal mesh implants. POP is not a life-threatening condition, but a functional problem that impairs quality of life for women. The old adage “primum non nocere” is particularly appropriate when dealing with this condition which requires no treatment when asymptomatic. It is currently admitted that a certain degree of POP is physiological with aging when situated above the landmark of the hymen. Treatment should be individualized and the use of mesh needs to be selective and appropriate. Mesh implants are probably an important tool in pelvic reconstructive surgery, but the ideal implant has yet to be found. The indications for its use still require caution and discernment. This review explores the reasons behind the introduction of mesh augmentation in POP surgery, and aims to clarify the risks, benefits, and the recognized indications for its use. PMID:25848324

  5. SUPERIMPOSED MESH PLOTTING IN MCNP

    SciTech Connect

    J. HENDRICKS

    2001-02-01

    The capability to plot superimposed meshes has been added to MCNP{trademark}. MCNP4C featured a superimposed mesh weight window generator which enabled users to set up geometries without having to subdivide geometric cells for variance reduction. The variance reduction was performed with weight windows on a rectangular or cylindrical mesh superimposed over the physical geometry. Experience with the new capability was favorable but also indicated that a number of enhancements would be very beneficial, particularly a means of visualizing the mesh and its values. The mathematics for plotting the mesh and its values is described here along with a description of other upgrades.

  6. Parallel Adaptive Mesh Refinement

    SciTech Connect

    Diachin, L; Hornung, R; Plassmann, P; WIssink, A

    2005-03-04

    As large-scale, parallel computers have become more widely available and numerical models and algorithms have advanced, the range of physical phenomena that can be simulated has expanded dramatically. Many important science and engineering problems exhibit solutions with localized behavior where highly-detailed salient features or large gradients appear in certain regions which are separated by much larger regions where the solution is smooth. Examples include chemically-reacting flows with radiative heat transfer, high Reynolds number flows interacting with solid objects, and combustion problems where the flame front is essentially a two-dimensional sheet occupying a small part of a three-dimensional domain. Modeling such problems numerically requires approximating the governing partial differential equations on a discrete domain, or grid. Grid spacing is an important factor in determining the accuracy and cost of a computation. A fine grid may be needed to resolve key local features while a much coarser grid may suffice elsewhere. Employing a fine grid everywhere may be inefficient at best and, at worst, may make an adequately resolved simulation impractical. Moreover, the location and resolution of fine grid required for an accurate solution is a dynamic property of a problem's transient features and may not be known a priori. Adaptive mesh refinement (AMR) is a technique that can be used with both structured and unstructured meshes to adjust local grid spacing dynamically to capture solution features with an appropriate degree of resolution. Thus, computational resources can be focused where and when they are needed most to efficiently achieve an accurate solution without incurring the cost of a globally-fine grid. Figure 1.1 shows two example computations using AMR; on the left is a structured mesh calculation of a impulsively-sheared contact surface and on the right is the fuselage and volume discretization of an RAH-66 Comanche helicopter [35]. Note the

  7. Particle-mesh techniques

    NASA Technical Reports Server (NTRS)

    Macneice, Peter

    1995-01-01

    This is an introduction to numerical Particle-Mesh techniques, which are commonly used to model plasmas, gravitational N-body systems, and both compressible and incompressible fluids. The theory behind this approach is presented, and its practical implementation, both for serial and parallel machines, is discussed. This document is based on a four-hour lecture course presented by the author at the NASA Summer School for High Performance Computational Physics, held at Goddard Space Flight Center.

  8. Delaunay Refinement Mesh Generation

    DTIC Science & Technology

    1997-05-18

    GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) 5d. PROJECT NUMBER 5e. TASK NUMBER 5f. WORK UNIT NUMBER 7. PERFORMING ORGANIZATION NAME(S...146 6.2 Related Work in Robust Computational Geometry . . . . . . . . . . . . . . . . . . . . . . . 148 6.3...during my seven years at Carnegie Mellon. Most of this work was carried out at the 61c Café in Pittsburgh. v vi Chapter 1 Introduction Meshes composed

  9. On a combined adaptive tetrahedral tracing and edge diffraction model

    NASA Astrophysics Data System (ADS)

    Hart, Carl R.

    A major challenge in architectural acoustics is the unification of diffraction models and geometric acoustics. For example, geometric acoustics is insufficient to quantify the scattering characteristics of acoustic diffusors. Typically the time-independent boundary element method (BEM) is the method of choice. In contrast, time-domain computations are of interest for characterizing both the spatial and temporal scattering characteristics of acoustic diffusors. Hence, a method is sought that predicts acoustic scattering in the time-domain. A prediction method, which combines an advanced image source method and an edge diffraction model, is investigated for the prediction of time-domain scattering. Adaptive tetrahedral tracing is an advanced image source method that generates image sources through an adaptive process. Propagating tetrahedral beams adapt to ensonified geometry mapping the geometric sound field in space and along boundaries. The edge diffraction model interfaces with the adaptive tetrahedral tracing process by the transfer of edge geometry and visibility information. Scattering is quantified as the contribution of secondary sources along a single or multiple interacting edges. Accounting for a finite number of diffraction permutations approximates the scattered sound field. Superposition of the geometric and scattered sound fields results in a synthesized impulse response between a source and a receiver. Evaluation of the prediction technique involves numerical verification and numerical validation. Numerical verification is based upon a comparison with analytic and numerical (BEM) solutions for scattering geometries. Good agreement is shown for the selected scattering geometries. Numerical validation is based upon experimentally determined scattered impulse responses of acoustic diffusors. Experimental data suggests that the predictive model is appropriate for high-frequency predictions. For the experimental determination of the scattered impulse

  10. A novel three-dimensional mesh deformation method based on sphere relaxation

    SciTech Connect

    Zhou, Xuan; Li, Shuixiang

    2015-10-01

    In our previous work (2013) [19], we developed a disk relaxation based mesh deformation method for two-dimensional mesh deformation. In this paper, the idea of the disk relaxation is extended to the sphere relaxation for three-dimensional meshes with large deformations. We develop a node based pre-displacement procedure to apply initial movements on nodes according to their layer indices. Afterwards, the nodes are moved locally by the improved sphere relaxation algorithm to transfer boundary deformations and increase the mesh quality. A three-dimensional mesh smoothing method is also adopted to prevent the occurrence of the negative volume of elements, and further improve the mesh quality. Numerical applications in three-dimension including the wing rotation, bending beam and morphing aircraft are carried out. The results demonstrate that the sphere relaxation based approach generates the deformed mesh with high quality, especially regarding complex boundaries and large deformations.

  11. Platelet adhesion on phosphorus-incorporated tetrahedral amorphous carbon films

    NASA Astrophysics Data System (ADS)

    Liu, Aiping; Zhu, Jiaqi; Liu, Meng; Dai, Zhifei; Han, Xiao; Han, Jiecai

    2008-11-01

    The haemocompatibility of phosphorus-incorporated tetrahedral amorphous carbon (ta-C:P) films, synthesized by filtered cathodic vacuum arc technique with PH 3 as the dopant source, was assessed by in vitro platelet adhesion tests. Results based on scanning electron microscopy and contact angle measurements reveal that phosphorus incorporation improves the wettability and blood compatibility of ta-C film. Our studies may provide a novel approach for the design and synthesis of doped ta-C films to repel platelet adhesion and reduce thrombosis risk.

  12. Search for Fingerprints of Tetrahedral Symmetry in ^{156}Gd

    SciTech Connect

    Doan, Q. T.; Curien, D.; Stezowski, O.; Dudek, J.; Mazurek, K.; Gozdz, A.; Piot, J.; Duchene, G.; Gall, B.; Molique, H.; Richet, M.; Guinet, D.; Redon, N.; Schmitt, Ch.; Jones, P.; Peura, P.; Ketelhut, S.; Nyman, M.; Jakobsson, U.; Greenlees, P. T.; Julin, R.; Juutinen, S.; Rahkila, P.; Maj, A.; Zuber, K.; Bednarczyk, P.; Schunck, N.; Dobaczewski, J.; Astier, A.; Deloncle, I.; Verney, D.; Gerl, J.

    2009-01-01

    Theoretical predictions suggest the presence of tetrahedral symmetry as an explanation for the vanishing intra-band E2 transitions at the bottom of the odd-spin negative-parity band in ^{156}Gd. The present study reports on experiment performed to address this phenomenon. It allowed to remove certain ambiguities related to the intra-band E2 transitions in the negative-parity bands to determine the new inter-band transitions and reduced probability ratios B(E2)/B(E1) and, for the first time, to determine the experimental uncertainties related to the latter observable.

  13. Mesh Algorithms for PDE with Sieve I: Mesh Distribution

    DOE PAGES

    Knepley, Matthew G.; Karpeev, Dmitry A.

    2009-01-01

    We have developed a new programming framework, called Sieve, to support parallel numerical partial differential equation(s) (PDE) algorithms operating over distributed meshes. We have also developed a reference implementation of Sieve in C++ as a library of generic algorithms operating on distributed containers conforming to the Sieve interface. Sieve makes instances of the incidence relation, or arrows, the conceptual first-class objects represented in the containers. Further, generic algorithms acting on this arrow container are systematically used to provide natural geometric operations on the topology and also, through duality, on the data. Finally, coverings and duality are used to encode notmore » only individual meshes, but all types of hierarchies underlying PDE data structures, including multigrid and mesh partitions. In order to demonstrate the usefulness of the framework, we show how the mesh partition data can be represented and manipulated using the same fundamental mechanisms used to represent meshes. We present the complete description of an algorithm to encode a mesh partition and then distribute a mesh, which is independent of the mesh dimension, element shape, or embedding. Moreover, data associated with the mesh can be similarly distributed with exactly the same algorithm. The use of a high level of abstraction within the Sieve leads to several benefits in terms of code reuse, simplicity, and extensibility. We discuss these benefits and compare our approach to other existing mesh libraries.« less

  14. Single walled carbon nanotube network—Tetrahedral amorphous carbon composite film

    SciTech Connect

    Iyer, Ajai Liu, Xuwen; Koskinen, Jari; Kaskela, Antti; Kauppinen, Esko I.; Johansson, Leena-Sisko

    2015-06-14

    Single walled carbon nanotube network (SWCNTN) was coated by tetrahedral amorphous carbon (ta-C) using a pulsed Filtered Cathodic Vacuum Arc system to form a SWCNTN—ta-C composite film. The effects of SWCNTN areal coverage density and ta-C coating thickness on the composite film properties were investigated. X-Ray photoelectron spectroscopy measurements prove the presence of high quality sp{sup 3} bonded ta-C coating on the SWCNTN. Raman spectroscopy suggests that the single wall carbon nanotubes (SWCNTs) forming the network survived encapsulation in the ta-C coating. Nano-mechanical testing suggests that the ta-C coated SWCNTN has superior wear performance compared to uncoated SWCNTN.

  15. Numerical Simulation of the Radiation Symmetry in Tetrahedral Hohlraums.

    NASA Astrophysics Data System (ADS)

    Macfarlane, J. J.; Magelssen, G.; Delamater, N.; Wallace, J.; Murphy, T.; Klare, K.

    1997-11-01

    The successful implosion of a capsule in indirect-drive ICF experiments requires the ability to diagnose and control the radiation symmetry at its surface. Recently, there has been increased interest in studying whether ``tetrahedral'' hohlraums can produce a radiation field on the capsule which is more symmetric than cylindrical hohlraums. Asymmetries in the 3-D radiation field are influenced by: the size and shape of the hohlraum, the wall albedo, the capsule radius, the LEH and diagnostic holes, and the laser beam pointing and power/energy imbalances. Time-dependent asymmetries are caused by the laser pulse history, changing wall albedos, and wall motion. We have recently developed a 3-D view factor code to investigate the time-dependent radiation asymmetry in indirect-drive ICF experiments. This code includes algorithms for the accurate solution of configuration factors, as well as laser ray-trace algorithms for modeling OMEGA, NOVA, and NIF laser/target chamber geometries. Time-dependent albedos are based on 1-D radiation-hydrodynamics simulations using UTA opacities for the high-Z wall. We will present results from simulations of OMEGA tetrahedral hohlraum experiments, as well as simulations showing how asymmetries scale with capsule/hohlraum configuration.

  16. The lightweight and large porous mesh concept for hernia repair.

    PubMed

    Klosterhalfen, Bernd; Junge, Karsten; Klinge, Uwe

    2005-01-01

    In modern hernia surgery, there are two competing mesh concepts which often lead to controversial discussions, on the one hand the heavyweight small porous model and on the other, the lightweight large porous hypothesis. The present review illustrates the rationale of both mesh concepts and compares experimental data with the first clinical data available. In summary, the lightweight large porous mesh philosophy takes into consideration all of the recent data regarding physiology and mechanics of the abdominal wall and inguinal region. Furthermore, the new mesh concept reveals an optimized foreign body reaction based on reduced amounts of mesh material and, in particular, a significantly decreased surface area in contact with the recipient host tissues by the large porous model. Finally, recent data demonstrate that alterations in the extracellular matrix of hernia patients play a crucial role in the development of hernia recurrence. In particular, long-term recurrences months or years after surgery and implantation of mesh can be explained by the extracellular matrix hypothesis. However, if the altered extracellular matrix proves to be the weak area, the decisive question is whether the amount of material as well as mechanical and tensile strength of the surgical mesh are really of significant importance for the development of recurrent hernia. All experimental evidence and first clinical data indicate the superiority of the lightweight large porous mesh concept with regard to a reduced number of long-term complications and particularly, increased comfort and quality of life after hernia repair.

  17. Tangle-Free Finite Element Mesh Motion for Ablation Problems

    NASA Technical Reports Server (NTRS)

    Droba, Justin

    2016-01-01

    In numerical simulations involving boundaries that evolve in time, the primary challenge is updating the computational mesh to reflect the physical changes in the domain. In particular, the fundamental objective for any such \\mesh motion" scheme is to maintain mesh quality and suppress unphysical geometric anamolies and artifacts. External to a physical process of interest, mesh motion is an added component that determines the specifics of how to move the mesh given certain limited information from the main system. This paper develops a set of boundary conditions designed to eliminate tangling and internal collision within the context of PDE-based mesh motion (linear elasticity). These boundary conditions are developed for two- and three-dimensional meshes. The paper presents detailed algorithms for commonly occuring topological scenarios and explains how to apply them appropriately. Notably, the techniques discussed herein make use of none of the specifics of any particular formulation of mesh motion and thus are more broadly applicable. The two-dimensional algorithms are validated by an extensive verification procedure. Finally, many examples of diverse geometries in both two- and three-dimensions are shown to showcase the capabilities of the tangle-free boundary conditions.

  18. Volume Decomposition and Feature Recognition for Hexahedral Mesh Generation

    SciTech Connect

    GADH,RAJIT; LU,YONG; TAUTGES,TIMOTHY J.

    1999-09-27

    Considerable progress has been made on automatic hexahedral mesh generation in recent years. Several automatic meshing algorithms have proven to be very reliable on certain classes of geometry. While it is always worth pursuing general algorithms viable on more general geometry, a combination of the well-established algorithms is ready to take on classes of complicated geometry. By partitioning the entire geometry into meshable pieces matched with appropriate meshing algorithm the original geometry becomes meshable and may achieve better mesh quality. Each meshable portion is recognized as a meshing feature. This paper, which is a part of the feature based meshing methodology, presents the work on shape recognition and volume decomposition to automatically decompose a CAD model into meshable volumes. There are four phases in this approach: (1) Feature Determination to extinct decomposition features, (2) Cutting Surfaces Generation to form the ''tailored'' cutting surfaces, (3) Body Decomposition to get the imprinted volumes; and (4) Meshing Algorithm Assignment to match volumes decomposed with appropriate meshing algorithms. The feature determination procedure is based on the CLoop feature recognition algorithm that is extended to be more general. Results are demonstrated over several parts with complicated topology and geometry.

  19. Acoustic Detection and Tracking of a Class I UAS with a Small Tetrahedral Microphone Array

    DTIC Science & Technology

    2014-09-01

    Acoustic Detection and Tracking of a Class I UAS with a Small Tetrahedral Microphone Array by Minas Benyamin and Geoffrey H Goldman ARL...20783-1138 ARL-TR-7086 September 2014 Acoustic Detection and Tracking of a Class I UAS with a Small Tetrahedral Microphone Array Minas...with a Small Tetrahedral Microphone Array 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) Minas Benyamin and

  20. Constrained CVT Meshes and a Comparison of Triangular Mesh Generators

    SciTech Connect

    Nguyen, Hoa; Burkardt, John; Gunzburger, Max; Ju, Lili; Saka, Yuki

    2009-01-01

    Mesh generation in regions in Euclidean space is a central task in computational science, and especially for commonly used numerical methods for the solution of partial differential equations, e.g., finite element and finite volume methods. We focus on the uniform Delaunay triangulation of planar regions and, in particular, on how one selects the positions of the vertices of the triangulation. We discuss a recently developed method, based on the centroidal Voronoi tessellation (CVT) concept, for effecting such triangulations and present two algorithms, including one new one, for CVT-based grid generation. We also compare several methods, including CVT-based methods, for triangulating planar domains. To this end, we define several quantitative measures of the quality of uniform grids. We then generate triangulations of several planar regions, including some having complexities that are representative of what one may encounter in practice. We subject the resulting grids to visual and quantitative comparisons and conclude that all the methods considered produce high-quality uniform grids and that the CVT-based grids are at least as good as any of the others.

  1. Mesh Deformation Based on Fully Stressed Design: The Method and Two-Dimensional Examples

    NASA Technical Reports Server (NTRS)

    Hsu, Su-Yuen; Chang, Chau-Lyan

    2007-01-01

    Mesh deformation in response to redefined boundary geometry is a frequently encountered task in shape optimization and analysis of fluid-structure interaction. We propose a simple and concise method for deforming meshes defined with three-node triangular or four-node tetrahedral elements. The mesh deformation method is suitable for large boundary movement. The approach requires two consecutive linear elastic finite-element analyses of an isotropic continuum using a prescribed displacement at the mesh boundaries. The first analysis is performed with homogeneous elastic property and the second with inhomogeneous elastic property. The fully stressed design is employed with a vanishing Poisson s ratio and a proposed form of equivalent strain (modified Tresca equivalent strain) to calculate, from the strain result of the first analysis, the element-specific Young s modulus for the second analysis. The theoretical aspect of the proposed method, its convenient numerical implementation using a typical linear elastic finite-element code in conjunction with very minor extra coding for data processing, and results for examples of large deformation of two-dimensional meshes are presented in this paper. KEY WORDS: Mesh deformation, shape optimization, fluid-structure interaction, fully stressed design, finite-element analysis, linear elasticity, strain failure, equivalent strain, Tresca failure criterion

  2. toolkit computational mesh conceptual model.

    SciTech Connect

    Baur, David G.; Edwards, Harold Carter; Cochran, William K.; Williams, Alan B.; Sjaardema, Gregory D.

    2010-03-01

    The Sierra Toolkit computational mesh is a software library intended to support massively parallel multi-physics computations on dynamically changing unstructured meshes. This domain of intended use is inherently complex due to distributed memory parallelism, parallel scalability, heterogeneity of physics, heterogeneous discretization of an unstructured mesh, and runtime adaptation of the mesh. Management of this inherent complexity begins with a conceptual analysis and modeling of this domain of intended use; i.e., development of a domain model. The Sierra Toolkit computational mesh software library is designed and implemented based upon this domain model. Software developers using, maintaining, or extending the Sierra Toolkit computational mesh library must be familiar with the concepts/domain model presented in this report.

  3. Discrete Surface Evolution and Mesh Deformation for Aircraft Icing Applications

    NASA Technical Reports Server (NTRS)

    Thompson, David; Tong, Xiaoling; Arnoldus, Qiuhan; Collins, Eric; McLaurin, David; Luke, Edward; Bidwell, Colin S.

    2013-01-01

    Robust, automated mesh generation for problems with deforming geometries, such as ice accreting on aerodynamic surfaces, remains a challenging problem. Here we describe a technique to deform a discrete surface as it evolves due to the accretion of ice. The surface evolution algorithm is based on a smoothed, face-offsetting approach. We also describe a fast algebraic technique to propagate the computed surface deformations into the surrounding volume mesh while maintaining geometric mesh quality. Preliminary results presented here demonstrate the ecacy of the approach for a sphere with a prescribed accretion rate, a rime ice accretion, and a more complex glaze ice accretion.

  4. An Adaptive Mesh Algorithm: Mesh Structure and Generation

    SciTech Connect

    Scannapieco, Anthony J.

    2016-06-21

    The purpose of Adaptive Mesh Refinement is to minimize spatial errors over the computational space not to minimize the number of computational elements. The additional result of the technique is that it may reduce the number of computational elements needed to retain a given level of spatial accuracy. Adaptive mesh refinement is a computational technique used to dynamically select, over a region of space, a set of computational elements designed to minimize spatial error in the computational model of a physical process. The fundamental idea is to increase the mesh resolution in regions where the physical variables are represented by a broad spectrum of modes in k-space, hence increasing the effective global spectral coverage of those physical variables. In addition, the selection of the spatially distributed elements is done dynamically by cyclically adjusting the mesh to follow the spectral evolution of the system. Over the years three types of AMR schemes have evolved; block, patch and locally refined AMR. In block and patch AMR logical blocks of various grid sizes are overlaid to span the physical space of interest, whereas in locally refined AMR no logical blocks are employed but locally nested mesh levels are used to span the physical space. The distinction between block and patch AMR is that in block AMR the original blocks refine and coarsen entirely in time, whereas in patch AMR the patches change location and zone size with time. The type of AMR described herein is a locally refi ned AMR. In the algorithm described, at any point in physical space only one zone exists at whatever level of mesh that is appropriate for that physical location. The dynamic creation of a locally refi ned computational mesh is made practical by a judicious selection of mesh rules. With these rules the mesh is evolved via a mesh potential designed to concentrate the nest mesh in regions where the physics is modally dense, and coarsen zones in regions where the physics is modally

  5. Multigrid techniques for unstructured meshes

    NASA Technical Reports Server (NTRS)

    Mavriplis, D. J.

    1995-01-01

    An overview of current multigrid techniques for unstructured meshes is given. The basic principles of the multigrid approach are first outlined. Application of these principles to unstructured mesh problems is then described, illustrating various different approaches, and giving examples of practical applications. Advanced multigrid topics, such as the use of algebraic multigrid methods, and the combination of multigrid techniques with adaptive meshing strategies are dealt with in subsequent sections. These represent current areas of research, and the unresolved issues are discussed. The presentation is organized in an educational manner, for readers familiar with computational fluid dynamics, wishing to learn more about current unstructured mesh techniques.

  6. Serial and parallel dynamic adaptation of general hybrid meshes

    NASA Astrophysics Data System (ADS)

    Kavouklis, Christos

    termination detection algorithm of Dijkstra is employed for (i) parallel flagging of mesh edges, (ii) global numbering of newly created nodes, and (iii) deletion of nodes after coarsening. An inexpensive dynamic load balancing strategy is employed to redistribute work load among processors after adaptation. In particular, only the initial coarse mesh, with proper weighting, is balanced, which yields savings in computation time and a simple implementation of mesh quality preservation rules, while facilitating coarsening of refined elements. Special algorithms are employed for (i) parallel flow feature detection, (ii) data migration and dynamic updates of local data structures, (iii) determination of the new interpartition boundary and (iv) determination of the communication pattern of processors after load balancing.

  7. Nuclear tetrahedral symmetry: possibly present throughout the periodic table.

    PubMed

    Dudek, J; Goźdź, A; Schunck, N; Miśkiewicz, M

    2002-06-24

    More than half a century after the fundamental, spherical shell structure in nuclei had been established, theoretical predictions indicated that the shell gaps comparable or even stronger than those at spherical shapes may exist. Group-theoretical analysis supported by realistic mean-field calculations indicate that the corresponding nuclei are characterized by the TD(d) ("double-tetrahedral") symmetry group. Strong shell-gap structure is enhanced by the existence of the four-dimensional irreducible representations of TD(d); it can be seen as a geometrical effect that does not depend on a particular realization of the mean field. Possibilities of discovering the TD(d) symmetry in experiment are discussed.

  8. Structural and electronic properties of a tetrahedral amorphous carbon surface

    NASA Astrophysics Data System (ADS)

    Dong, Jianjun; Drabold, D. A.

    1997-03-01

    We present ab initio studies of a model of tetrahedral amorphous carbon (ta-C) surface. Our methodology is LDA (with Harris functional and local basis) molecular dynamics simulations. The surface is modeled by a 216 atom slab supercell. Several candidate slabs are constructed by starting with the DTW model (B.R. Djordjevic, M.F. Thorpe and F. Wooten, Phys. Rev. B 52) 5685 (1995) and applying various simulated heating/quenching cycles. We analyze the structural and electronic properties of the surface , with special attention forcused on the electronic signatures of surface structural defects. Preliminary results indicate that the surface layer significantly graphitizes, and many surface gap states are present in the electronic density of states.

  9. Photonuclear sum rules and the tetrahedral configuration of He4

    NASA Astrophysics Data System (ADS)

    Gazit, Doron; Barnea, Nir; Bacca, Sonia; Leidemann, Winfried; Orlandini, Giuseppina

    2006-12-01

    Three well-known photonuclear sum rules (SR), i.e., the Thomas-Reiche-Kuhn, the bremsstrahlungs and the polarizability SR are calculated for He4 with the realistic nucleon-nucleon potential Argonne V18 and the three-nucleon force Urbana IX. The relation between these sum rules and the corresponding energy weighted integrals of the cross section is discussed. Two additional equivalences for the bremsstrahlungs SR are given, which connect it to the proton-neutron and neutron-neutron distances. Using them, together with our result for the bremsstrahlungs SR, we find a deviation from the tetrahedral symmetry of the spatial configuration of He4. The possibility to access this deviation experimentally is discussed.

  10. A radiative model of quark masses with binary tetrahedral symmetry

    NASA Astrophysics Data System (ADS)

    Natale, Alexander

    2017-01-01

    A radiative model of quark and lepton masses utilizing the binary tetrahedral (T‧) flavor symmetry, or horizontal symmetry, is proposed which produces the first two generation of quark masses through their interactions with vector-like quarks that carry charges under an additional U (1). By softly-breaking the T‧ to a residual Z4 through the vector-like quark masses, a CKM mixing angle close to the Cabibbo angle is produced. In order to generate the cobimaximal neutrino oscillation pattern (θ13 ≠ 0 ,θ23 = π / 4 ,δCP = ± π / 2) and protect the horizontal symmetry from arbitrary corrections in the lepton sector, there are automatically two stabilizing symmetries in the dark sector. Several benchmark cases where the correct relic density is achieved in a multi-component DM scenario, as well as the potential collider signatures of the vector-like quarks are discussed.

  11. Photoconductive detection of tetrahedrally coordinated hydrogen in ZnO.

    PubMed

    Koch, S G; Lavrov, E V; Weber, J

    2012-04-20

    In this Letter we apply an innovative experimental approach, which allows us to improve the sensitivity of detecting local vibrational modes (LVMs) even in highly absorbing spectral regions. This photoconductive technique allowed us to confirm a recent suggestion of a new multicenter bond for hydrogen in ZnO [A. Janotti and C. G. Van de Walle, Nature Mater. 6, 44 (2007)]. The two LVMs of the hydrogen substituting oxygen in ZnO are identified at 742 and 792 cm(-1). The modes belong to a nondegenerated A(1) and a twofold degenerated E representations of the C(3v) point group. The tetrahedral coordination of the hydrogen atom is the result of a newly detected multicenter bond for defects in solids.

  12. Slave fermion formalism for the tetrahedral spin chain

    NASA Astrophysics Data System (ADS)

    Mohan, Priyanka; Rao, Sumathi

    2016-09-01

    We use the SU(2) slave fermion approach to study a tetrahedral spin 1/2 chain, which is a one-dimensional generalization of the two dimensional Kitaev honeycomb model. Using the mean field theory, coupled with a gauge fixing procedure to implement the single occupancy constraint, we obtain the phase diagram of the model. We then show that it matches the exact results obtained earlier using the Majorana fermion representation. We also compute the spin-spin correlation in the gapless phase and show that it is a spin liquid. Finally, we map the one-dimensional model in terms of the slave fermions to the model of 1D p-wave superconducting model with complex parameters and show that the parameters of our model fall in the topological trivial regime and hence does not have edge Majorana modes.

  13. Optimization of Time-Dependent Particle Tracing Using Tetrahedral Decomposition

    NASA Technical Reports Server (NTRS)

    Kenwright, David; Lane, David

    1995-01-01

    An efficient algorithm is presented for computing particle paths, streak lines and time lines in time-dependent flows with moving curvilinear grids. The integration, velocity interpolation and step-size control are all performed in physical space which avoids the need to transform the velocity field into computational space. This leads to higher accuracy because there are no Jacobian matrix approximations or expensive matrix inversions. Integration accuracy is maintained using an adaptive step-size control scheme which is regulated by the path line curvature. The problem of cell-searching, point location and interpolation in physical space is simplified by decomposing hexahedral cells into tetrahedral cells. This enables the point location to be done analytically and substantially faster than with a Newton-Raphson iterative method. Results presented show this algorithm is up to six times faster than particle tracers which operate on hexahedral cells yet produces almost identical particle trajectories.

  14. How does tetrahedral structure grow in liquid silicon upon supercooling?

    PubMed

    Morishita, Tetsuya

    2006-10-20

    We present an extensive set of isothermal-isobaric first-principles molecular-dynamics simulations of liquid silicon over a temperature range of 950-1700 K. We find that the tetrahedral order gradually grows upon cooling to approximately 1200 K, but that the growth accelerates significantly below approximately 1200 K. This growth process gives rise to anomalous changes in density and liquid structure upon supercooling. In particular, we find that the atomic coordination number remains constant to approximately 1200 K and then begins to decrease below approximately 1200 K, which resolves the existing controversy regarding liquid structure in the supercooled regime [T. H. Kim, Phys. Rev. Lett. 95, 085501 (2005)10.1103/PhysRevLett.95.085501].

  15. Self-assembly of tetrahedral plasmonic nanoclusters for optical metafluids

    NASA Astrophysics Data System (ADS)

    Schade, Nicholas; Manoharan, Vinothan

    2015-03-01

    We direct the assembly of clusters of gold nanospheres that behave as nanoscale electromagnetic resonators. We use spherical gold nanoparticles that are exceptionally smooth, monocrystalline, and monodisperse. These particles exhibit highly reproducible scattering spectra compared with gold colloids that are available commercially. We mix these positively charged particles with negatively charged dielectric particles. The gold particles stick to the dielectric particles permanently and randomly in a process that can be modeled mathematically as ``random parking,'' a type of non-equilibrium self-assembly. By controlling the particles' sizes, stoichiometry, and interactions, we maximize the yield of tetrahedral clusters, the ideal structures for isotropic metamaterials. We measure the optical properties of these structures with dark-field spectroscopy to characterize their suitability as building blocks for a bulk, isotropic, optical metafluid.

  16. A bicontinuous tetrahedral structure in a liquid-crystalline lipid

    NASA Astrophysics Data System (ADS)

    Longley, William; McIntosh, Thomas J.

    1983-06-01

    The structure of most lipid-water phases can be visualized as an ordered distribution of two liquid media, water and hydrocarbons, separated by a continuous surface covered by the polar groups of the lipid molecules1. In the cubic phases in particular, rod-like elements are linked into three-dimensional networks1,2. Two of these phases (space groups Ia3d and Pn3m) contain two such three-dimensional networks mutually inter-woven and unconnected. Under the constraints of energy minimization3, the interface between the components in certain of these `porous fluids' may well resemble one of the periodic minimal surface structures of the type described mathematically by Schwarz4,5. A structure of this sort has been proposed for the viscous isotropic (cubic) form of glycerol monooleate (GMO) by Larsson et al.6 who suggested that the X-ray diagrams of Lindblom et al.7 indicated a body-centred crystal structure in which lipid bilayers might be arranged as in Schwarz's octahedral surface4. We have now found that at high water contents, a primitive cubic lattice better fits the X-ray evidence with the material in the crystal arranged in a tetrahedral way. The lipid appears to form a single bilayer, continuous in three dimensions, separating two continuous interlinked networks of water. Each of the water networks has the symmetry of the diamond crystal structure and the bilayer lies in the space between them following a surface resembling Schwarz's tetrahedral surface4.

  17. Host response to synthetic mesh in women with mesh complications

    PubMed Central

    Nolfi, Alexis L.; Brown, Bryan N.; Liang, Rui; Palcsey, Stacy L.; Bonidie, Michael J.; Abramowitch, Steven D.; Moalli, Pamela A.

    2016-01-01

    BACKGROUND Despite good anatomic and functional outcomes, urogynecologic polypropylene meshes that are used to treat pelvic organ prolapse and stress urinary incontinence are associated with significant complications, most commonly mesh exposure and pain. Few studies have been performed that specifically focus on the host response to urogynecologic meshes. The macrophage has long been known to be the key cell type that mediates the foreign body response. Conceptually, macrophages that respond to a foreign body can be dichotomized broadly into M1 proinflammatory and M2 proremodeling subtypes. A prolonged M1 response is thought to result in chronic inflammation and the formation of foreign body giant cells with potential for ongoing tissue damage and destruction. Although a limited M2 predominant response is favorable for tissue integration and ingrowth, excessive M2 activity can lead to accelerated fibrillar matrix deposition and result in fibrosis and encapsulation of the mesh. OBJECTIVE The purpose of this study was to define and compare the macrophage response in patients who undergo mesh excision surgery for the indication of pain vs a mesh exposure. STUDY DESIGN Patients who were scheduled to undergo a surgical excision of mesh for pain or exposure at Magee-Womens Hospital were offered enrollment. Twenty-seven mesh-vagina complexes that were removed for the primary complaint of a mesh exposure (n = 15) vs pain in the absence of an exposure (n = 12) were compared with 30 full-thickness vaginal biopsy specimens from women who underwent benign gynecologic surgery without mesh. Macrophage M1 proinflammatory vs M2 proremodeling phenotypes were examined via immunofluorescent labeling for cell surface markers CD86 (M1) vs CD206 (M2) and M1 vs M2 cytokines via enzyme-linked immunosorbent assay. The amount of matrix metalloproteinase-2 (MMP-2) and matrix metalloproteinase-9 (MMP-9) proteolytic enzymes were quantified by zymography and substrate degradation assays, as an

  18. 3D unstructured-mesh radiation transport codes

    SciTech Connect

    Morel, J.

    1997-12-31

    Three unstructured-mesh radiation transport codes are currently being developed at Los Alamos National Laboratory. The first code is ATTILA, which uses an unstructured tetrahedral mesh in conjunction with standard Sn (discrete-ordinates) angular discretization, standard multigroup energy discretization, and linear-discontinuous spatial differencing. ATTILA solves the standard first-order form of the transport equation using source iteration in conjunction with diffusion-synthetic acceleration of the within-group source iterations. DANTE is designed to run primarily on workstations. The second code is DANTE, which uses a hybrid finite-element mesh consisting of arbitrary combinations of hexahedra, wedges, pyramids, and tetrahedra. DANTE solves several second-order self-adjoint forms of the transport equation including the even-parity equation, the odd-parity equation, and a new equation called the self-adjoint angular flux equation. DANTE also offers three angular discretization options: $S{_}n$ (discrete-ordinates), $P{_}n$ (spherical harmonics), and $SP{_}n$ (simplified spherical harmonics). DANTE is designed to run primarily on massively parallel message-passing machines, such as the ASCI-Blue machines at LANL and LLNL. The third code is PERICLES, which uses the same hybrid finite-element mesh as DANTE, but solves the standard first-order form of the transport equation rather than a second-order self-adjoint form. DANTE uses a standard $S{_}n$ discretization in angle in conjunction with trilinear-discontinuous spatial differencing, and diffusion-synthetic acceleration of the within-group source iterations. PERICLES was initially designed to run on workstations, but a version for massively parallel message-passing machines will be built. The three codes will be described in detail and computational results will be presented.

  19. Risk Factors for Mesh Exposure after Transvaginal Mesh Surgery

    PubMed Central

    Niu, Ke; Lu, Yong-Xian; Shen, Wen-Jie; Zhang, Ying-Hui; Wang, Wen-Ying

    2016-01-01

    Background: Mesh exposure after surgery continues to be a clinical challenge for urogynecological surgeons. The purpose of this study was to explore the risk factors for polypropylene (PP) mesh exposure after transvaginal mesh (TVM) surgery. Methods: This study included 195 patients with advanced pelvic organ prolapse (POP), who underwent TVM from January 2004 to December 2012 at the First Affiliated Hospital of Chinese PLA General Hospital. Clinical data were evaluated including patient's demography, TVM type, concomitant procedures, operation time, blood loss, postoperative morbidity, and mesh exposure. Mesh exposure was identified through postoperative vaginal examination. Statistical analysis was performed to identify risk factors for mesh exposure. Results: Two-hundred and nine transvaginal PP meshes were placed, including 194 in the anterior wall and 15 in the posterior wall. Concomitant tension-free vaginal tape was performed in 61 cases. The mean follow-up time was 35.1 ± 23.6 months. PP mesh exposure was identified in 32 cases (16.4%), with 31 in the anterior wall and 1 in the posterior wall. Significant difference was found in operating time and concomitant procedures between exposed and nonexposed groups (F = 7.443, P = 0.007; F = 4.307, P = 0.039, respectively). Binary logistic regression revealed that the number of concomitant procedures and operation time were risk factors for mesh exposure (P = 0.001, P = 0.043). Conclusion: Concomitant procedures and increased operating time increase the risk for postoperative mesh exposure in patients undergoing TVM surgery for POP. PMID:27453227

  20. Invisible metallic mesh

    PubMed Central

    Ye, Dexin; Lu, Ling; Joannopoulos, John D.; Soljačić, Marin; Ran, Lixin

    2016-01-01

    A solid material possessing identical electromagnetic properties as air has yet to be found in nature. Such a medium of arbitrary shape would neither reflect nor refract light at any angle of incidence in free space. Here, we introduce nonscattering corrugated metallic wires to construct such a medium. This was accomplished by aligning the dark-state frequencies in multiple scattering channels of a single wire. Analytical solutions, full-wave simulations, and microwave measurement results on 3D printed samples show omnidirectional invisibility in any configuration. This invisible metallic mesh can improve mechanical stability, electrical conduction, and heat dissipation of a system, without disturbing the electromagnetic design. Our approach is simple, robust, and scalable to higher frequencies. PMID:26884208

  1. Quadrilateral finite element mesh coarsening

    SciTech Connect

    Staten, Matthew L; Dewey, Mark W; Benzley, Steven E

    2012-10-16

    Techniques for coarsening a quadrilateral mesh are described. These techniques include identifying a coarsening region within the quadrilateral mesh to be coarsened. Quadrilateral elements along a path through the coarsening region are removed. Node pairs along opposite sides of the path are identified. The node pairs along the path are then merged to collapse the path.

  2. Why Is the Tetrahedral Bond Angle 109 Degrees? The Tetrahedron-in-a-Cube

    ERIC Educational Resources Information Center

    Lim, Kieran F.

    2012-01-01

    The common question of why the tetrahedral angle is 109.471 degrees can be answered using a tetrahedron-in-a-cube, along with some Year 10 level mathematics. The tetrahedron-in-a-cube can also be used to demonstrate the non-polarity of tetrahedral molecules, the relationship between different types of lattice structures, and to demonstrate that…

  3. Collision-broadened linewidths of tetrahedral molecules. III - Dispersion and induction interactions

    NASA Technical Reports Server (NTRS)

    Varanasi, P.

    1975-01-01

    Expressions for the interruption functions S2(b) have been derived for the dispersion interaction between a tetrahedral molecule and a linear molecule, and for the interaction between the octopole moment of a tetrahedral molecule and the octopole-induced dipole moment in a perturbing molecule.

  4. Composite structured mesh generation with automatic domain decomposition in complex geometries

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This paper presents a novel automatic domain decomposition method to generate quality composite structured meshes in complex domains with arbitrary shapes, in which quality structured mesh generation still remains a challenge. The proposed decomposition algorithm is based on the analysis of an initi...

  5. A Survey of Solver-Related Geometry and Meshing Issues

    NASA Technical Reports Server (NTRS)

    Masters, James; Daniel, Derick; Gudenkauf, Jared; Hine, David; Sideroff, Chris

    2016-01-01

    There is a concern in the computational fluid dynamics community that mesh generation is a significant bottleneck in the CFD workflow. This is one of several papers that will help set the stage for a moderated panel discussion addressing this issue. Although certain general "rules of thumb" and a priori mesh metrics can be used to ensure that some base level of mesh quality is achieved, inadequate consideration is often given to the type of solver or particular flow regime on which the mesh will be utilized. This paper explores how an analyst may want to think differently about a mesh based on considerations such as if a flow is compressible vs. incompressible or hypersonic vs. subsonic or if the solver is node-centered vs. cell-centered. This paper is a high-level investigation intended to provide general insight into how considering the nature of the solver or flow when performing mesh generation has the potential to increase the accuracy and/or robustness of the solution and drive the mesh generation process to a state where it is no longer a hindrance to the analysis process.

  6. Which mesh for hernia repair?

    PubMed Central

    Brown, CN; Finch, JG

    2010-01-01

    INTRODUCTION The concept of using a mesh to repair hernias was introduced over 50 years ago. Mesh repair is now standard in most countries and widely accepted as superior to primary suture repair. As a result, there has been a rapid growth in the variety of meshes available and choosing the appropriate one can be difficult. This article outlines the general properties of meshes and factors to be considered when selecting one. MATERIALS AND METHODS We performed a search of the medical literature from 1950 to 1 May 2009, as indexed by Medline, using the PubMed search engine (). To capture all potentially relevant articles with the highest degree of sensitivity, the search terms were intentionally broad. We used the following terms: ‘mesh, pore size, strength, recurrence, complications, lightweight, properties’. We also hand-searched the bibliographies of relevant articles and product literature to identify additional pertinent reports. RESULTS AND CONCLUSIONS The most important properties of meshes were found to be the type of filament, tensile strength and porosity. These determine the weight of the mesh and its biocompatibility. The tensile strength required is much less than originally presumed and light-weight meshes are thought to be superior due to their increased flexibility and reduction in discomfort. Large pores are also associated with a reduced risk of infection and shrinkage. For meshes placed in the peritoneal cavity, consideration should also be given to the risk of adhesion formation. A variety of composite meshes have been promoted to address this, but none appears superior to the others. Finally, biomaterials such as acellular dermis have a place for use in infected fields but have yet to prove their worth in routine hernia repair. PMID:20501011

  7. Report on FY11 Extensions to MeshKit and RGG

    SciTech Connect

    Jain, Rajeev

    2014-01-01

    One of the barriers to performing high-fidelity computational simulation of reactor core phenomena is the production of good-quality geometry and mesh models required by these simulations. Although a variety of geometry and meshing tools are available, they suffer from shortcomings in usability, robustness, or generality which makes them difficult to apply to reactor applications. The SHARP frameworks project is addressing these deficiencies by developing a library of mesh generation algorithms, and tools based on that library. The library is known as MeshKit, and one of the tools being developed is named RGG, for Reactor Geometry (and mesh) Generator. Over the past year, our meshing-related work was split between general design improvements in MeshKit, enhancing RGG to run in parallel, and the application of RGG to several specific reactor designs. These activities are described in this report.

  8. Heterogeneous Wireless Mesh Network Technology Evaluation for Space Proximity and Surface Applications

    NASA Technical Reports Server (NTRS)

    DeCristofaro, Michael A.; Lansdowne, Chatwin A.; Schlesinger, Adam M.

    2014-01-01

    NASA has identified standardized wireless mesh networking as a key technology for future human and robotic space exploration. Wireless mesh networks enable rapid deployment, provide coverage in undeveloped regions. Mesh networks are also self-healing, resilient, and extensible, qualities not found in traditional infrastructure-based networks. Mesh networks can offer lower size, weight, and power (SWaP) than overlapped infrastructure-perapplication. To better understand the maturity, characteristics and capability of the technology, we developed an 802.11 mesh network consisting of a combination of heterogeneous commercial off-the-shelf devices and opensource firmware and software packages. Various streaming applications were operated over the mesh network, including voice and video, and performance measurements were made under different operating scenarios. During the testing several issues with the currently implemented mesh network technology were identified and outlined for future work.

  9. Are patient specific meshes required for EIT head imaging?

    PubMed

    Jehl, Markus; Aristovich, Kirill; Faulkner, Mayo; Holder, David

    2016-06-01

    Head imaging with electrical impedance tomography (EIT) is usually done with time-differential measurements, to reduce time-invariant modelling errors. Previous research suggested that more accurate head models improved image quality, but no thorough analysis has been done on the required accuracy. We propose a novel pipeline for creation of precise head meshes from magnetic resonance imaging and computed tomography scans, which was applied to four different heads. Voltages were simulated on all four heads for perturbations of different magnitude, haemorrhage and ischaemia, in five different positions and for three levels of instrumentation noise. Statistical analysis showed that reconstructions on the correct mesh were on average 25% better than on the other meshes. However, the stroke detection rates were not improved. We conclude that a generic head mesh is sufficient for monitoring patients for secondary strokes following head trauma.

  10. 21 CFR 878.3300 - Surgical mesh.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... GENERAL AND PLASTIC SURGERY DEVICES Prosthetic Devices § 878.3300 Surgical mesh. (a) Identification... acetabular and cement restrictor mesh used during orthopedic surgery. (b) Classification. Class II....

  11. 21 CFR 878.3300 - Surgical mesh.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... GENERAL AND PLASTIC SURGERY DEVICES Prosthetic Devices § 878.3300 Surgical mesh. (a) Identification... acetabular and cement restrictor mesh used during orthopedic surgery. (b) Classification. Class II....

  12. 21 CFR 878.3300 - Surgical mesh.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... GENERAL AND PLASTIC SURGERY DEVICES Prosthetic Devices § 878.3300 Surgical mesh. (a) Identification... acetabular and cement restrictor mesh used during orthopedic surgery. (b) Classification. Class II....

  13. Streaming Compression of Hexahedral Meshes

    SciTech Connect

    Isenburg, M; Courbet, C

    2010-02-03

    We describe a method for streaming compression of hexahedral meshes. Given an interleaved stream of vertices and hexahedral our coder incrementally compresses the mesh in the presented order. Our coder is extremely memory efficient when the input stream documents when vertices are referenced for the last time (i.e. when it contains topological finalization tags). Our coder then continuously releases and reuses data structures that no longer contribute to compressing the remainder of the stream. This means in practice that our coder has only a small fraction of the whole mesh in memory at any time. We can therefore compress very large meshes - even meshes that do not file in memory. Compared to traditional, non-streaming approaches that load the entire mesh and globally reorder it during compression, our algorithm trades a less compact compressed representation for significant gains in speed, memory, and I/O efficiency. For example, on the 456k hexahedra 'blade' mesh, our coder is twice as fast and uses 88 times less memory (only 3.1 MB) with the compressed file increasing about 3% in size. We also present the first scheme for predictive compression of properties associated with hexahedral cells.

  14. Out-of-Core Streamline Visualization on Large Unstructured Meshes

    NASA Technical Reports Server (NTRS)

    Ueng, Shyh-Kuang; Sikorski, K.; Ma, Kwan-Liu

    1997-01-01

    It's advantageous for computational scientists to have the capability to perform interactive visualization on their desktop workstations. For data on large unstructured meshes, this capability is not generally available. In particular, particle tracing on unstructured grids can result in a high percentage of non-contiguous memory accesses and therefore may perform very poorly with virtual memory paging schemes. The alternative of visualizing a lower resolution of the data degrades the original high-resolution calculations. This paper presents an out-of-core approach for interactive streamline construction on large unstructured tetrahedral meshes containing millions of elements. The out-of-core algorithm uses an octree to partition and restructure the raw data into subsets stored into disk files for fast data retrieval. A memory management policy tailored to the streamline calculations is used such that during the streamline construction only a very small amount of data are brought into the main memory on demand. By carefully scheduling computation and data fetching, the overhead of reading data from the disk is significantly reduced and good memory performance results. This out-of-core algorithm makes possible interactive streamline visualization of large unstructured-grid data sets on a single mid-range workstation with relatively low main-memory capacity: 5-20 megabytes. Our test results also show that this approach is much more efficient than relying on virtual memory and operating system's paging algorithms.

  15. Nanowire mesh solar fuels generator

    DOEpatents

    Yang, Peidong; Chan, Candace; Sun, Jianwei; Liu, Bin

    2016-05-24

    This disclosure provides systems, methods, and apparatus related to a nanowire mesh solar fuels generator. In one aspect, a nanowire mesh solar fuels generator includes (1) a photoanode configured to perform water oxidation and (2) a photocathode configured to perform water reduction. The photocathode is in electrical contact with the photoanode. The photoanode may include a high surface area network of photoanode nanowires. The photocathode may include a high surface area network of photocathode nanowires. In some embodiments, the nanowire mesh solar fuels generator may include an ion conductive polymer infiltrating the photoanode and the photocathode in the region where the photocathode is in electrical contact with the photoanode.

  16. Natural frequency of uniform and optimized tetrahedral truss platforms

    NASA Technical Reports Server (NTRS)

    Wu, K. Chauncey; Lake, Mark S.

    1994-01-01

    Qualitative and quantitative estimates for the fundamental frequency of uniform and optimized tetrahedral truss platforms are determined. A semiempirical equation is developed for the frequency of free-free uniform trusses as a function of member material properties, truss dimensions, and parasitic (nonstructural) mass fraction Mp/Mt. Optimized trusses with frequencies approximately two times those of uniform trusses are determined by varying the cross-sectional areas of member groups. Trusses with 3 to 8 rings, no parasitic mass, and member areas up to 25 times the minimum area are optimized. Frequencies computed for ranges of both Mp/Mt and the ratio of maximum area to minimum area are normalized to the frequency of a uniform truss with no parasitic mass. The normalized frequency increases with the number of rings, and both frequency and the ratio of maximum area to minimum area decrease with increasing Mp/Mt. Frequency improvements that are achievable with a limited number of member areas are estimated for a 3-ring truss by using Taguchi methods. Joint stiffness knockdown effects are also considered. Comparison of optimized and baseline uniform truss frequencies indicates that tailoring can significantly increase structural frequency; maximum gains occur for trusses with low values of Mp/Mt. This study examines frequency trends for ranges of structural parameters and may be used as a preliminary design guide.

  17. Connectivity, dynamics, and structure in a tetrahedral network liquid.

    PubMed

    Roldán-Vargas, Sándalo; Rovigatti, Lorenzo; Sciortino, Francesco

    2017-01-04

    We report a detailed computational study by Brownian dynamics simulations of the structure and dynamics of a liquid of patchy particles which forms an amorphous tetrahedral network upon decreasing the temperature. The highly directional particle interactions allow us to investigate the system connectivity by discriminating the total set of particles into different populations according to a penta-modal distribution of bonds per particle. With this methodology we show how the particle bonding process is not randomly independent but it manifests clear bond correlations at low temperatures. We further explore the dynamics of the system in real space and establish a clear relation between particle mobility and particle connectivity. In particular, we provide evidence of anomalous diffusion at low temperatures and reveal how the dynamics is affected by the short-time hopping motion of the weakly bounded particles. Finally we widely investigate the dynamics and structure of the system in Fourier space and identify two quantitatively similar length scales, one dynamic and the other static, which increase upon cooling the system and reach distances of the order of few particle diameters. We summarize our findings in a qualitative picture where the low temperature regime of the viscoelastic liquid is understood in terms of an evolving network of long time metastable cooperative domains of particles.

  18. TET peptidases: A family of tetrahedral complexes conserved in prokaryotes.

    PubMed

    Appolaire, Alexandre; Colombo, Matteo; Basbous, Hind; Gabel, Frank; Girard, E; Franzetti, Bruno

    2016-03-01

    The TET peptidases are large polypeptide destruction machines present among prokaryotes. They form 12-subunits hollow tetrahedral particles, and belong to the family of M42 metallo-peptidases. Structural characterization of various archaeal and bacterial complexes has revealed a unique mechanism of internal compartmentalization and peptide trafficking that distinguishes them from the other oligomeric peptidases. Different versions of the TET complex often co-exist in the cytosol of microorganisms. In depth enzymatic studies have revealed that they are non-processive cobalt-activated aminopeptidases and display contrasting substrate specificities based on the properties of the catalytic chambers. Recent studies have shed light on the assembly mechanism of homo and hetero-dodecameric TET complexes and shown that the activity of TET aminopeptidase towards polypeptides is coupled with its assembly process. These findings suggested a functional regulation based on oligomerization control in vivo. This review describes a current knowledge on M42 TET peptidases biochemistry and discuss their possible physiological roles. This article is a part of the Special Issue entitled: «A potpourri of proteases and inhibitors: from molecular toolboxes to signalling scissors».

  19. Multi-Criterion Preliminary Design of a Tetrahedral Truss Platform

    NASA Technical Reports Server (NTRS)

    Wu, K. Chauncey

    1995-01-01

    An efficient method is presented for multi-criterion preliminary design and demonstrated for a tetrahedral truss platform. The present method requires minimal analysis effort and permits rapid estimation of optimized truss behavior for preliminary design. A 14-m-diameter, 3-ring truss platform represents a candidate reflector support structure for space-based science spacecraft. The truss members are divided into 9 groups by truss ring and position. Design variables are the cross-sectional area of all members in a group, and are either 1, 3 or 5 times the minimum member area. Non-structural mass represents the node and joint hardware used to assemble the truss structure. Taguchi methods are used to efficiently identify key points in the set of Pareto-optimal truss designs. Key points identified using Taguchi methods are the maximum frequency, minimum mass, and maximum frequency-to-mass ratio truss designs. Low-order polynomial curve fits through these points are used to approximate the behavior of the full set of Pareto-optimal designs. The resulting Pareto-optimal design curve is used to predict frequency and mass for optimized trusses. Performance improvements are plotted in frequency-mass (criterion) space and compared to results for uniform trusses. Application of constraints to frequency and mass and sensitivity to constraint variation are demonstrated.

  20. Tetrahedral Arrangements of Perylene Bisimide Columns via Supramolecular Orientational Memory.

    PubMed

    Sahoo, Dipankar; Peterca, Mihai; Aqad, Emad; Partridge, Benjamin E; Heiney, Paul A; Graf, Robert; Spiess, Hans W; Zeng, Xiangbing; Percec, Virgil

    2017-01-24

    Chiral, shape, and liquid crystalline memory effects are well-known to produce commercial macroscopic materials with important applications as springs, sensors, displays, and memory devices. A supramolecular orientational memory effect that provides complex nanoscale arrangements was only recently reported. This supramolecular orientational memory was demonstrated to preserve the molecular orientation and packing within supramolecular units of a self-assembling cyclotriveratrylene crown at the nanoscale upon transition between its columnar hexagonal and Pm3̅n cubic periodic arrays. Here we report the discovery of supramolecular orientational memory in a dendronized perylene bisimide (G2-PBI) that self-assembles into tetrameric crowns and subsequently self-organizes into supramolecular columns and spheres. This supramolecular orientation memory upon transition between columnar hexagonal and body-centered cubic (BCC) mesophases preserves the 3-fold cubic [111] orientations rather than the 4-fold [100] axes, generating an unusual tetrahedral arrangement of supramolecular columns. These results indicate that the supramolecular orientational memory concept may be general for periodic arrays of self-assembling dendrons and dendrimers as well as for other periodic and quasiperiodic nanoscale organizations comprising supramolecular spheres, generated from other organized complex soft matter including block copolymers and surfactants.

  1. Superlattice Quantum Dots of Self-assembled Tetrahedral Nanocrystals

    NASA Astrophysics Data System (ADS)

    Wang, Z. L.; Yin, J. S.

    1998-03-01

    Size and shape selected CoO nanocrystals dominated by tetrahedral shape have been synthesized and assembled to form superlattices with long-range translation order and short-range orientation order [1]. The crystallography of self-assembled nanocrystal superlattices (NCSs) is determined not only by the size of the nanocrystals and the length of the passivation thiolates, but by the shape of the nanocrystals. The structure of the nanocrystals are determined by high-resolution transmission electron microscopy (TEM). A model is suggested to explain the observed orientation order and the result supports that the thiolates molecules distributed on the nanocrystal surfaces form bundles, and the nanocrystals are assembled in such a way that the bundles tend to fill the entire space. The stability of the NCSs has been examined in-situ using TEM. The result suggests the strong effect of the substrate on NCSs. [1] J.S. Yin and Z.L. Wang, Phys. Rev. Lett., 79 (No. 13) (1997) 2570-2573. [2] J.S. Yin and Z.L. Wang, J. Phys. Chem., 101 (1997) 8979-8983.

  2. Cu Mesh for Flexible Transparent Conductive Electrodes

    PubMed Central

    Kim, Won-Kyung; Lee, Seunghun; Hee Lee, Duck; Hee Park, In; Seong Bae, Jong; Woo Lee, Tae; Kim, Ji-Young; Hun Park, Ji; Chan Cho, Yong; Ryong Cho, Chae; Jeong, Se-Young

    2015-01-01

    Copper electrodes with a micromesh/nanomesh structure were fabricated on a polyimide substrate using UV lithography and wet etching to produce flexible transparent conducting electrodes (TCEs). Well-defined mesh electrodes were realized through the use of high-quality Cu thin films. The films were fabricated using radio-frequency (RF) sputtering with a single-crystal Cu target—a simple but innovative approach that overcame the low oxidation resistance of ordinary Cu. Hybrid Cu mesh electrodes were fabricated by adding a capping layer of either ZnO or Al-doped ZnO. The sheet resistance and the transmittance of the electrode with an Al-doped ZnO capping layer were 6.197 ohm/sq and 90.657%, respectively, and the figure of merit was 60.502 × 10–3/ohm, which remained relatively unchanged after thermal annealing at 200 °C and 1,000 cycles of bending. This fabrication technique enables the mass production of large-area flexible TCEs, and the stability and high performance of Cu mesh hybrid electrodes in harsh environments suggests they have strong potential for application in smart displays and solar cells. PMID:26039977

  3. Mesh Convergence Requirements for Composite Damage Models

    NASA Technical Reports Server (NTRS)

    Davila, Carlos G.

    2016-01-01

    The ability of the finite element method to accurately represent the response of objects with intricate geometry and loading renders the finite element method as an extremely versatile analysis technique for structural analysis. Finite element analysis is routinely used in industry to calculate deflections, stress concentrations, natural frequencies, buckling loads, and much more. The method works by discretizing complex problems into smaller, simpler approximations that are valid over small uniform domains. For common analyses, the maximum size of the elements that can be used is often be determined by experience. However, to verify the quality of a solution, analyses with several levels of mesh refinement should be performed to ensure that the solution has converged. In recent years, the finite element method has been used to calculate the resistance of structures, and in particular that of composite structures. A number of techniques such as cohesive zone modeling, the virtual crack closure technique, and continuum damage modeling have emerged that can be used to predict cracking, delaminations, fiber failure, and other composite damage modes that lead to structural collapse. However, damage models present mesh refinement requirements that are not well understood. In this presentation, we examine different mesh refinement issues related to the representation of damage in composite materials. Damage process zone sizes and their corresponding mesh requirements will be discussed. The difficulties of modeling discontinuities and the associated need for regularization techniques will be illustrated, and some unexpected element size constraints will be presented. Finally, some of the difficulties in constructing models of composite structures capable of predicting transverse matrix cracking will be discussed. It will be shown that to predict the initiation and propagation of transverse matrix cracks, their density, and their saturation may require models that are

  4. Gradient scaling for nonuniform meshes

    SciTech Connect

    Margolin, L.G.; Ruppel, H.M.; Demuth, R.B.

    1985-01-01

    This paper is concerned with the effect of nonuniform meshes on the accuracy of finite-difference calculations of fluid flow. In particular, when a simple shock propagates through a nonuniform mesh, one may fail to model the jump conditions across the shock even when the equations are differenced in manifestly conservative fashion. We develop an approximate dispersion analysis of the numerical equations and identify the source of the mesh dependency with the form of the artificial viscosity. We then derive an algebraic correction to the numerical equations - a scaling factor for the pressure gradient - to essentially eliminate the mesh dependency. We present several calculations to illustrate our theory. We conclude with an alternate interpretation of our results. 14 refs., 5 figs.

  5. Mersiline mesh in premaxillary augmentation.

    PubMed

    Foda, Hossam M T

    2005-01-01

    Premaxillary retrusion may distort the aesthetic appearance of the columella, lip, and nasal tip. This defect is characteristically seen in, but not limited to, patients with cleft lip nasal deformity. This study investigated 60 patients presenting with premaxillary deficiencies in which Mersiline mesh was used to augment the premaxilla. All the cases had surgery using the external rhinoplasty technique. Two methods of augmentation with Mersiline mesh were used: the Mersiline roll technique, for the cases with central symmetric deficiencies, and the Mersiline packing technique, for the cases with asymmetric deficiencies. Premaxillary augmentation with Mersiline mesh proved to be simple technically, easy to perform, and not associated with any complications. Periodic follow-up evaluation for a mean period of 32 months (range, 12-98 months) showed that an adequate degree of premaxillary augmentation was maintained with no clinically detectable resorption of the mesh implant.

  6. Parallel Adaptive Mesh Refinement Library

    NASA Technical Reports Server (NTRS)

    Mac-Neice, Peter; Olson, Kevin

    2005-01-01

    Parallel Adaptive Mesh Refinement Library (PARAMESH) is a package of Fortran 90 subroutines designed to provide a computer programmer with an easy route to extension of (1) a previously written serial code that uses a logically Cartesian structured mesh into (2) a parallel code with adaptive mesh refinement (AMR). Alternatively, in its simplest use, and with minimal effort, PARAMESH can operate as a domain-decomposition tool for users who want to parallelize their serial codes but who do not wish to utilize adaptivity. The package builds a hierarchy of sub-grids to cover the computational domain of a given application program, with spatial resolution varying to satisfy the demands of the application. The sub-grid blocks form the nodes of a tree data structure (a quad-tree in two or an oct-tree in three dimensions). Each grid block has a logically Cartesian mesh. The package supports one-, two- and three-dimensional models.

  7. Final Technical Report: Global Field Aligned Mesh and Gyrokinetic Field Solver in a Tokamak Edge Geometry

    SciTech Connect

    Cummings, Julian C.

    2013-05-15

    This project was a collaboration between researchers at the California Institute of Technology and the University of California, Irvine to investigate the utility of a global field-aligned mesh and gyrokinetic field solver for simulations of the tokamak plasma edge region. Mesh generation software from UC Irvine was tested with specific tokamak edge magnetic geometry scenarios and the quality of the meshes and the solutions to the gyrokinetic Poisson equation were evaluated.

  8. A Mass Conservation Algorithm for Adaptive Unrefinement Meshes Used by Finite Element Methods

    DTIC Science & Technology

    2012-01-01

    dimensional mesh generation. In: Proc. 4th ACM-SIAM Symp. on Disc. Algorithms. (1993) 83–92 [9] Weatherill, N., Hassan, O., Marcum, D., Marchant, M.: Grid ...Conference on Computational Science, ICCS 2012 A Mass Conservation Algorithm For Adaptive Unrefinement Meshes Used By Finite Element Methods Hung V. Nguyen...velocity fields, and chemical distribution, as well as conserve mass, especially for water quality applications. Solution accuracy depends highly on mesh

  9. A finite element boundary integral formulation for radiation and scattering by cavity antennas using tetrahedral elements

    NASA Technical Reports Server (NTRS)

    Gong, J.; Volakis, J. L.; Chatterjee, A.; Jin, J. M.

    1992-01-01

    A hybrid finite element boundary integral formulation is developed using tetrahedral and/or triangular elements for discretizing the cavity and/or aperture of microstrip antenna arrays. The tetrahedral elements with edge based linear expansion functions are chosen for modeling the volume region and triangular elements are used for discretizing the aperture. The edge based expansion functions are divergenceless thus removing the requirement to introduce a penalty term and the tetrahedral elements permit greater geometrical adaptability than the rectangular bricks. The underlying theory and resulting expressions are discussed in detail together with some numerical scattering examples for comparison and demonstration.

  10. Unstructured mesh methods for CFD

    NASA Technical Reports Server (NTRS)

    Peraire, J.; Morgan, K.; Peiro, J.

    1990-01-01

    Mesh generation methods for Computational Fluid Dynamics (CFD) are outlined. Geometric modeling is discussed. An advancing front method is described. Flow past a two engine Falcon aeroplane is studied. An algorithm and associated data structure called the alternating digital tree, which efficiently solves the geometric searching problem is described. The computation of an initial approximation to the steady state solution of a given poblem is described. Mesh generation for transient flows is described.

  11. A Fast Upwind Solver for the Euler Equations on Three-Dimensional Unstructured Meshes

    NASA Technical Reports Server (NTRS)

    Frink, Neal T.; Pirzadeh, Shahyar

    2004-01-01

    An upwind scheme is presented for solving the three-dimensional Euler equations on unstructured tetrahedral meshes. Spatial discretization is accomplished by a cell-centered finite-volume formulation using flux-difference splitting. Higher-order differences are formed by a novel cell reconstruction process which results in computational times per cell comparable to those of structured codes. The approach yields highly resolved solutions in regions of smooth flow while avoiding oscillations across shocks without explicit limiting. Solutions are advanced in time by a 3-stage Runge-Kutta time-stepping scheme with convergence accelerated to steady state by local time stepping and implicit residual smoothing. Solutions are presented for a range of configurations in the transonic speed regime to demonstrate code accuracy, speed, and robustness. The results include an assessment of grid sensitivity and convergence acceleration by mesh sequencing.

  12. Assessment of mesh simplification algorithm quality

    NASA Astrophysics Data System (ADS)

    Roy, Michael; Nicolier, Frederic; Foufou, S.; Truchetet, Frederic; Koschan, Andreas; Abidi, Mongi A.

    2002-03-01

    Traditionally, medical geneticists have employed visual inspection (anthroposcopy) to clinically evaluate dysmorphology. In the last 20 years, there has been an increasing trend towards quantitative assessment to render diagnosis of anomalies more objective and reliable. These methods have focused on direct anthropometry, using a combination of classical physical anthropology tools and new instruments tailor-made to describe craniofacial morphometry. These methods are painstaking and require that the patient remain still for extended periods of time. Most recently, semiautomated techniques (e.g., structured light scanning) have been developed to capture the geometry of the face in a matter of seconds. In this paper, we establish that direct anthropometry and structured light scanning yield reliable measurements, with remarkably high levels of inter-rater and intra-rater reliability, as well as validity (contrasting the two methods).

  13. Method and system for mesh network embedded devices

    NASA Technical Reports Server (NTRS)

    Wang, Ray (Inventor)

    2009-01-01

    A method and system for managing mesh network devices. A mesh network device with integrated features creates an N-way mesh network with a full mesh network topology or a partial mesh network topology.

  14. Parallel adaptation of general three-dimensional hybrid meshes

    SciTech Connect

    Kavouklis, Christos Kallinderis, Yannis

    2010-05-01

    A new parallel dynamic mesh adaptation and load balancing algorithm for general hybrid grids has been developed. The meshes considered in this work are composed of four kinds of elements; tetrahedra, prisms, hexahedra and pyramids, which poses a challenge to parallel mesh adaptation. Additional complexity imposed by the presence of multiple types of elements affects especially data migration, updates of local data structures and interpartition data structures. Efficient partition of hybrid meshes has been accomplished by transforming them to suitable graphs and using serial graph partitioning algorithms. Communication among processors is based on the faces of the interpartition boundary and the termination detection algorithm of Dijkstra is employed to ensure proper flagging of edges for refinement. An inexpensive dynamic load balancing strategy is introduced to redistribute work load among processors after adaptation. In particular, only the initial coarse mesh, with proper weighting, is balanced which yields savings in computation time and relatively simple implementation of mesh quality preservation rules, while facilitating coarsening of refined elements. Special algorithms are employed for (i) data migration and dynamic updates of the local data structures, (ii) determination of the resulting interpartition boundary and (iii) identification of the communication pattern of processors. Several representative applications are included to evaluate the method.

  15. Low-energy tetrahedral polymorphs of carbon, silicon, and germanium

    NASA Astrophysics Data System (ADS)

    Mujica, Andrés; Pickard, Chris J.; Needs, Richard J.

    2015-06-01

    Searches for low-energy tetrahedral polymorphs of carbon and silicon have been performed using density functional theory computations and the ab initio random structure searching approach. Several of the hypothetical phases obtained in our searches have enthalpies that are lower or comparable to those of other polymorphs of group 14 elements that have either been experimentally synthesized or recently proposed as the structure of unknown phases obtained in experiments, and should thus be considered as particularly interesting candidates. A structure of P b a m symmetry with 24 atoms in the unit cell was found to be a low-energy, low-density metastable polymorph in carbon, silicon, and germanium. In silicon, P b a m is found to have a direct band gap at the zone center with an estimated value of 1.4 eV, which suggests applications as a photovoltaic material. We have also found a low-energy chiral framework structure of P 41212 symmetry with 20 atoms per cell containing fivefold spirals of atoms, whose projected topology is that of the so-called Cairo-type two-dimensional pentagonal tiling. We suggest that P 41212 is a likely candidate for the structure of the unknown phase XIII of silicon. We discuss P b a m and P 41212 in detail, contrasting their energetics and structures with those of other group 14 elements, particularly the recently proposed P 42/n c m structure, for which we also provide a detailed interpretation as a network of tilted diamondlike tetrahedra.

  16. User Manual for the PROTEUS Mesh Tools

    SciTech Connect

    Smith, Micheal A.; Shemon, Emily R.

    2015-06-01

    This report describes the various mesh tools that are provided with the PROTEUS code giving both descriptions of the input and output. In many cases the examples are provided with a regression test of the mesh tools. The most important mesh tools for any user to consider using are the MT_MeshToMesh.x and the MT_RadialLattice.x codes. The former allows the conversion between most mesh types handled by PROTEUS while the second allows the merging of multiple (assembly) meshes into a radial structured grid. Note that the mesh generation process is recursive in nature and that each input specific for a given mesh tool (such as .axial or .merge) can be used as “mesh” input for any of the mesh tools discussed in this manual.

  17. A Solution Adaptive Technique Using Tetrahedral Unstructured Grids

    NASA Technical Reports Server (NTRS)

    Pirzadeh, Shahyar Z.

    2000-01-01

    An adaptive unstructured grid refinement technique has been developed and successfully applied to several three dimensional inviscid flow test cases. The method is based on a combination of surface mesh subdivision and local remeshing of the volume grid Simple functions of flow quantities are employed to detect dominant features of the flowfield The method is designed for modular coupling with various error/feature analyzers and flow solvers. Several steady-state, inviscid flow test cases are presented to demonstrate the applicability of the method for solving practical three-dimensional problems. In all cases, accurate solutions featuring complex, nonlinear flow phenomena such as shock waves and vortices have been generated automatically and efficiently.

  18. Optical and magnetic properties of transition-metal ions in tetrahedral and octahedral compounds

    NASA Astrophysics Data System (ADS)

    Li, Huifang; Wang, Huaiqian; Kuang, Xiaoyu

    2011-10-01

    This paper presents the complete energy matrix of the 3d2 system containing the electron-electron interaction, the ligand-field interaction, the spin-orbit coupling interaction, and the Zeeman interaction, in which the optical spectra and g-factor of V3+and Ti2+ ions in the series of tetrahedral AIIBVI (AII=Zn, Cd, BVI=S, Se, Te) semiconductor materials are determined. In the investigation of the optical and magnetic properties of these transition-metal ions in the tetrahedral coordination complexes, we compared the data obtained from the transition-metal ions in the tetrahedral coordination complexes with those obtained from the corresponding ions in the octahedral ones, and found that the tetrahedral complexes have weaker crystal-field strength, inverse energy level ordering and stronger covalence effect.

  19. Single port laparoscopic mesh rectopexy

    PubMed Central

    2016-01-01

    Introduction Traditionally, laparoscopic mesh rectopexy is performed with four ports, in an attempt to improve cosmetic results. Following laparoscopic mesh rectopexy there is a new operative technique called single-port laparoscopic mesh rectopexy. Aim To evaluate the single-port laparoscopic mesh rectopexy technique in control of rectal prolapse and the cosmesis and body image issues of this technique. Material and methods The study was conducted in El Fayoum University Hospital between July 2013 and November 2014 in elective surgery for symptomatic rectal prolapse with single-port laparoscopic mesh rectopexy on 10 patients. Results The study included 10 patients: 3 (30%) males and 7 (70%) females. Their ages ranged between 19 years and 60 years (mean: 40.3 ±6 years), and they all underwent laparoscopic mesh rectopexy. There were no conversions to open technique, nor injuries to the rectum or bowel, and there were no mortalities. Mean operative time was 120 min (range: 90–150 min), and mean hospital stay was 2 days (range: 1–3 days). Preoperatively, incontinence was seen in 5 (50%) patients and constipation in 4 (40%). Postoperatively, improvement in these symptoms was seen in 3 (60%) patients for incontinence and in 3 (75%) for constipation. Follow-up was done for 6 months and no recurrence was found with better cosmetic appearance for all patients. Conclusions Single-port laparoscopic mesh rectopexy is a safe procedure with good results as regards operative time, improvement in bowel function, morbidity, cost, and recurrence, and with better cosmetic appearance. PMID:27350840

  20. A mesh adaptivity scheme on the Landau-de Gennes functional minimization case in 3D, and its driving efficiency

    NASA Astrophysics Data System (ADS)

    Bajc, Iztok; Hecht, Frédéric; Žumer, Slobodan

    2016-09-01

    This paper presents a 3D mesh adaptivity strategy on unstructured tetrahedral meshes by a posteriori error estimates based on metrics derived from the Hessian of a solution. The study is made on the case of a nonlinear finite element minimization scheme for the Landau-de Gennes free energy functional of nematic liquid crystals. Newton's iteration for tensor fields is employed with steepest descent method possibly stepping in. Aspects relating the driving of mesh adaptivity within the nonlinear scheme are considered. The algorithmic performance is found to depend on at least two factors: when to trigger each single mesh adaptation, and the precision of the correlated remeshing. Each factor is represented by a parameter, with its values possibly varying for every new mesh adaptation. We empirically show that the time of the overall algorithm convergence can vary considerably when different sequences of parameters are used, thus posing a question about optimality. The extensive testings and debugging done within this work on the simulation of systems of nematic colloids substantially contributed to the upgrade of an open source finite element-oriented programming language to its 3D meshing possibilities, as also to an outer 3D remeshing module.

  1. Shape effects on the random-packing density of tetrahedral particles.

    PubMed

    Zhao, Jian; Li, Shuixiang; Jin, Weiwei; Zhou, Xuan

    2012-09-01

    Regular tetrahedra have been demonstrated recently giving high packing density in random configurations. However, it is unknown whether the random-packing density of tetrahedral particles with other shapes can reach an even higher value. A numerical investigation on the random packing of regular and irregular tetrahedral particles is carried out. Shape effects of rounded corner, eccentricity, and height on the packing density of tetrahedral particles are studied. Results show that altering the shape of tetrahedral particles by rounding corners and edges, by altering the height of one vertex, or by lateral displacement of one vertex above its opposite face, all individually have the effect of reducing the random-packing density. In general, the random-packing densities of irregular tetrahedral particles are lower than that of regular tetrahedra. The ideal regular tetrahedron should be the shape which has the highest random-packing density in the family of tetrahedra, or even among convex bodies. An empirical formula is proposed to describe the rounded corner effect on the packing density, and well explains the density deviation of tetrahedral particles with different roundness ratios. The particles in the simulations are verified to be randomly packed by studying the pair correlation functions, which are consistent with previous results. The spherotetrahedral particle model with the relaxation algorithm is effectively applied in the simulations.

  2. Cache-oblivious mesh layouts

    SciTech Connect

    Yoon, Sung-Eui; Lindstrom, Peter; Pascucci, Valerio; Manocha, Dinesh

    2005-07-01

    We present a novel method for computing cache-oblivious layouts of large meshes that improve the performance of interactive visualization and geometric processing algorithms. Given that the mesh is accessed in a reasonably coherent manner, we assume no particular data access patterns or cache parameters of the memory hierarchy involved in the computation. Furthermore, our formulation extends directly to computing layouts of multi-resolution and bounding volume hierarchies of large meshes. We develop a simple and practical cache-oblivious metric for estimating cache misses. Computing a coherent mesh layout is reduced to a combinatorial optimization problem. We designed and implemented an out-of-core multilevel minimization algorithm and tested its performance on unstructured meshes composed of tens to hundreds of millions of triangles. Our layouts can significantly reduce the number of cache misses. We have observed 2-20 times speedups in view-dependent rendering, collision detection, and isocontour extraction without any modification of the algorithms or runtime applications.

  3. LayTracks3D: A new approach for meshing general solids using medial axis transform

    SciTech Connect

    Quadros, William Roshan

    2015-08-22

    This study presents an extension of the all-quad meshing algorithm called LayTracks to generate high quality hex-dominant meshes of general solids. LayTracks3D uses the mapping between the Medial Axis (MA) and the boundary of the 3D domain to decompose complex 3D domains into simpler domains called Tracks. Tracks in 3D have no branches and are symmetric, non-intersecting, orthogonal to the boundary, and the shortest path from the MA to the boundary. These properties of tracks result in desired meshes with near cube shape elements at the boundary, structured mesh along the boundary normal with any irregular nodes restricted to the MA, and sharp boundary feature preservation. The algorithm has been tested on a few industrial CAD models and hex-dominant meshes are shown in the Results section. Work is underway to extend LayTracks3D to generate all-hex meshes.

  4. Parallel octree-based hexahedral mesh generation for eulerian to lagrangian conversion.

    SciTech Connect

    Staten, Matthew L.; Owen, Steven James

    2010-09-01

    Computational simulation must often be performed on domains where materials are represented as scalar quantities or volume fractions at cell centers of an octree-based grid. Common examples include bio-medical, geotechnical or shock physics calculations where interface boundaries are represented only as discrete statistical approximations. In this work, we introduce new methods for generating Lagrangian computational meshes from Eulerian-based data. We focus specifically on shock physics problems that are relevant to ASC codes such as CTH and Alegra. New procedures for generating all-hexahedral finite element meshes from volume fraction data are introduced. A new primal-contouring approach is introduced for defining a geometric domain. New methods for refinement, node smoothing, resolving non-manifold conditions and defining geometry are also introduced as well as an extension of the algorithm to handle tetrahedral meshes. We also describe new scalable MPI-based implementations of these procedures. We describe a new software module, Sculptor, which has been developed for use as an embedded component of CTH. We also describe its interface and its use within the mesh generation code, CUBIT. Several examples are shown to illustrate the capabilities of Sculptor.

  5. Omental Lipid-Coated Mesh

    DTIC Science & Technology

    2011-06-16

    infection. If benefit is proven, this method will be a cost- effective way to prepare biologic and possibly synthetic meshes for use in hernia repair...omental coating is encouraging. 10. ::’UD./CI.I I CI’IIVI::’ Omentum, Mesh , Hernia 𔃺. ::.CI.Utill , I.LA::’::’II"II.A IIUN UI": I-­ a -.-I’I-c­...-u...abdominal wall hernia repair. If cheap and effective promotion of neovascularization could be initiated, we might be able to improve upon current

  6. Multiscale mesh generation on the sphere

    NASA Astrophysics Data System (ADS)

    Lambrechts, Jonathan; Comblen, Richard; Legat, Vincent; Geuzaine, Christophe; Remacle, Jean-François

    2008-12-01

    A method for generating computational meshes for applications in ocean modeling is presented. The method uses a standard engineering approach for describing the geometry of the domain that requires meshing. The underlying sphere is parametrized using stereographic coordinates. Then, coastlines are described with cubic splines drawn in the stereographic parametric space. The mesh generation algorithm builds the mesh in the parametric plane using available techniques. The method enables to import coastlines from different data sets and, consequently, to build meshes of domains with highly variable length scales. The results include meshes together with numerical simulations of various kinds.

  7. Hybrid Mesh for Nasal Airflow Studies

    PubMed Central

    Zubair, Mohammed; Abdullah, Mohammed Zulkifly; Ahmad, Kamarul Arifin

    2013-01-01

    The accuracy of the numerical result is closely related to mesh density as well as its distribution. Mesh plays a very significant role in the outcome of numerical simulation. Many nasal airflow studies have employed unstructured mesh and more recently hybrid mesh scheme has been utilized considering the complexity of anatomical architecture. The objective of this study is to compare the results of hybrid mesh with unstructured mesh and study its effect on the flow parameters inside the nasal cavity. A three-dimensional nasal cavity model is reconstructed based on computed tomographic images of a healthy Malaysian adult nose. Navier-Stokes equation for steady airflow is solved numerically to examine inspiratory nasal flow. The pressure drop obtained using the unstructured computational grid is about 22.6 Pa for a flow rate of 20 L/min, whereas the hybrid mesh resulted in 17.8 Pa for the same flow rate. The maximum velocity obtained at the nasal valve using unstructured grid is 4.18 m/s and that with hybrid mesh is around 4.76 m/s. Hybrid mesh reported lower grid convergence index (GCI) than the unstructured mesh. Significant differences between unstructured mesh and hybrid mesh are determined highlighting the usefulness of hybrid mesh for nasal airflow studies. PMID:23983811

  8. Design of a wire-mesh collimator for gamma cameras.

    PubMed

    Saripan, M Iqbal; Petrou, Maria; Wells, Kevin

    2007-09-01

    This paper presents a model of a wire-mesh collimator for a gamma camera that produces images of comparable quality as those produced with the conventional multihole collimator, but has about half the weight of the multihole collimator. The gamma camera and the collimator are simulated using the MCNPX code. Two final configurations of the wire-mesh collimator are proposed, and their performance is compared with other wire-mesh collimators and with the multihole collimator, using a point source, a planar square source, and two point sources, all in water. In all cases, photons with energy 140 keV are simulated. In addition, we use the simulation of a realistic phantom of a hot tumor in a warm background to assess the performance of our collimator in conjunction with an extended source.

  9. Multigrid for refined triangle meshes

    SciTech Connect

    Shapira, Yair

    1997-02-01

    A two-level preconditioning method for the solution of (locally) refined finite element schemes using triangle meshes is introduced. In the isotropic SPD case, it is shown that the condition number of the preconditioned stiffness matrix is bounded uniformly for all sufficiently regular triangulations. This is also verified numerically for an isotropic diffusion problem with highly discontinuous coefficients.

  10. Mesh Size Control of Friction

    NASA Astrophysics Data System (ADS)

    Pitenis, Angela; Uruena, Juan Manuel; Schulze, Kyle D.; Cooper, Andrew C.; Angelini, Thomas E.; Sawyer, W. Gregory

    Soft, permeable sliding interfaces in aqueous environments are ubiquitous in nature but their ability to maintain high lubricity in a poor lubricant (water) has not been well understood. Hydrogels are excellent materials for fundamental soft matter and biotribology studies due to their high water content. While mesh size controls the material and transport properties of a hydrogel, its effects on friction were only recently explored. Polyacrylamide hydrogels slid in a Gemini (self-mated) interface produced low friction under low speeds, low pressures, macroscopic contact areas, and room temperature aqueous environments. The friction coefficients at these interfaces are lowest at low speeds and are speed-independent. This behavior is due to thermal fluctuations at the interface separating the surfaces, with water shearing in this region being the main source of dissipation. We found that mesh size had an inverse correlation with friction. We further investigated a transition from this behavior at higher speeds, and found that the transition speed correlated with the mesh size and relaxation time of the polymer network. Very soft and correspondingly large mesh size Gemini hydrogels show superlubricity under specific conditions with friction being less than 0.005.

  11. Serine Protease Catalysis: A Computational Study of Tetrahedral Intermediates and Inhibitory Adducts.

    PubMed

    Ngo, Phong D; Mansoorabadi, Steven O; Frey, Perry A

    2016-08-04

    Peptide boronic acids and peptidyl trifluoromethyl ketones (TFKs) inhibit serine proteases by forming monoanionic, tetrahedral adducts to serine in the active sites. Investigators regard these adducts as analogs of monoanionic, tetrahedral intermediates. Density functional theory (DFT) calculations and fractional charge analysis show that tetrahedral adducts of model peptidyl TFKs are structurally and electrostatically very similar to corresponding tetrahedral intermediates. In contrast, the DFT calculations show the structures and electrostatic properties of analogous peptide boronate adducts to be significantly different. The peptide boronates display highly electrostatically positive boron, with correspondingly negative ligands in the tetrahedra. In addition, the computed boron-oxygen and boron-carbon bond lengths in peptide boronates (which are identical or very similar to the corresponding bonds in a peptide boronate adduct of α-lytic protease determined by X-ray crystallography at subangstrom resolution) are significantly longer than the corresponding bond lengths in model tetrahedral intermediates. Since protease-peptidyl TFKs incorporate low-barrier hydrogen bonds (LBHBs) between an active site histidine and aspartate, while the protease-peptide boronates do not, these data complement the spectroscopic and chemical evidence for the participation of LBHBs in catalysis by serine proteases. Moreover, while the potency of these classes of inhibitors can be correlated to the structures of the peptide moieties, the present results indicate that the strength of their bonds to serine contribute significantly to their inhibitory properties.

  12. [Late vaginal mesh exposure after prolapse repair].

    PubMed

    Chanelles, O; Poncelet, C

    2010-12-01

    Mesh exposure is the major complication of vaginal prolapse repair. Incidence rates are variable according to the series. Mesh exposure usually occurs during the year following the intervention. We report here the first case of a patient with a late exposure of an anterior vaginal mesh 4 years after a surgical cystocele repair. The mesh has been easily removed at the operative theatre by vaginal approach.

  13. Parallel paving: An algorithm for generating distributed, adaptive, all-quadrilateral meshes on parallel computers

    SciTech Connect

    Lober, R.R.; Tautges, T.J.; Vaughan, C.T.

    1997-03-01

    Paving is an automated mesh generation algorithm which produces all-quadrilateral elements. It can additionally generate these elements in varying sizes such that the resulting mesh adapts to a function distribution, such as an error function. While powerful, conventional paving is a very serial algorithm in its operation. Parallel paving is the extension of serial paving into parallel environments to perform the same meshing functions as conventional paving only on distributed, discretized models. This extension allows large, adaptive, parallel finite element simulations to take advantage of paving`s meshing capabilities for h-remap remeshing. A significantly modified version of the CUBIT mesh generation code has been developed to host the parallel paving algorithm and demonstrate its capabilities on both two dimensional and three dimensional surface geometries and compare the resulting parallel produced meshes to conventionally paved meshes for mesh quality and algorithm performance. Sandia`s {open_quotes}tiling{close_quotes} dynamic load balancing code has also been extended to work with the paving algorithm to retain parallel efficiency as subdomains undergo iterative mesh refinement.

  14. Vaginal repair with mesh versus colporrhaphy for prolapse: a randomised controlled trial

    PubMed Central

    Carey, M; Higgs, P; Goh, J; Lim, J; Leong, A; Krause, H; Cornish, A

    2009-01-01

    Objective To compare vaginal repair augmented by mesh with traditional colporrhaphy for the treatment of pelvic organ prolapse. Design Prospective randomised controlled trial. Setting Tertiary teaching hospital. Population One hundred and thirty-nine women with stage ≥2 prolapse according to the pelvic organ prolapse quantification (POP-Q) system requiring both anterior and posterior compartment repair. Methods Subjects were randomised to anterior and posterior vaginal repair with mesh augmentation (mesh group, n= 69) or traditional anterior and posterior colporrhaphy (no mesh group, n= 70). Main outcome measures The primary outcome was the absence of POP-Q stage ≥2 prolapse at 12 months. Secondary outcomes were symptoms, quality-of-life outcomes and satisfaction with surgery. Complications were also reported. Results For subjects attending the 12-month review, success in the mesh group was 81.0% (51 of 63 subjects) compared with 65.6% (40/61) in the no mesh group and was not significantly different (P-value = 0.07). A high level of satisfaction with surgery and improvements in symptoms and quality-of-life data were observed at 12 months compared to baseline in both groups, but there was no significant difference in these outcomes between the two groups. Vaginal mesh exposure occurred in four women in the mesh group (5.6%). De novo dyspareunia was reported by five of 30 (16.7%) sexually active women in the mesh group and five of 33 (15.2%) in the no mesh group at 12 months. Conclusion In this study, vaginal surgery augmented by mesh did not result in significantly less recurrent prolapse than traditional colporrhaphy 12 months following surgery. PMID:19583714

  15. Hybrid mesh generation using advancing reduction technique

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This study presents an extension of the application of the advancing reduction technique to the hybrid mesh generation. The proposed algorithm is based on a pre-generated rectangle mesh (RM) with a certain orientation. The intersection points between the two sets of perpendicular mesh lines in RM an...

  16. Haldane-Hubbard Mott Insulator: From Tetrahedral Spin Crystal to Chiral Spin Liquid.

    PubMed

    Hickey, Ciarán; Cincio, Lukasz; Papić, Zlatko; Paramekanti, Arun

    2016-04-01

    Motivated by cold atom experiments on Chern insulators, we study the honeycomb lattice Haldane-Hubbard Mott insulator of spin-1/2 fermions using exact diagonalization and density matrix renormalization group methods. We show that this model exhibits various chiral magnetic orders including a wide regime of triple-Q tetrahedral order. Incorporating third-neighbor hopping frustrates and ultimately melts this tetrahedral spin crystal. From analyzing the low energy spectrum, many-body Chern numbers, entanglement spectra, and modular matrices, we identify the molten state as a chiral spin liquid (CSL) with gapped semion excitations. We formulate and study the Chern-Simons-Higgs field theory of the exotic CSL-to-tetrahedral spin crystallization transition.

  17. Transformational part-count in layered octahedral-tetrahedral truss configurations

    NASA Technical Reports Server (NTRS)

    Lalvani, Haresh

    1990-01-01

    The number of component part (nodes, struts and panels) termed part count, is an important factor in the design, manufacture, and assembly of modular space structures. Part count expressions are presented for a variety of profiles derived from the layered octahedral-tetrahedral truss configuration. Referred to as the tetrahedral truss in the NASA projects, this specific geometry has been used in several missions. The general expressions presented here transforms to others as one profile changes to another. Such transformational part count relations provide a measure of flexibility and generality, and may be useful when dealing with a wider range of geometric configurations.

  18. Confined helium on Lagrange meshes.

    PubMed

    Baye, D; Dohet-Eraly, J

    2015-12-21

    The Lagrange-mesh method has the simplicity of a calculation on a mesh and can have the accuracy of a variational method. It is applied to the study of a confined helium atom. Two types of confinement are considered. Soft confinements by potentials are studied in perimetric coordinates. Hard confinement in impenetrable spherical cavities is studied in a system of rescaled perimetric coordinates varying in [0,1] intervals. Energies and mean values of the distances between electrons and between an electron and the helium nucleus are calculated. A high accuracy of 11 to 15 significant figures is obtained with small computing times. Pressures acting on the confined atom are also computed. For sphere radii smaller than 1, their relative accuracies are better than 10(-10). For larger radii up to 10, they progressively decrease to 10(-3), still improving the best literature results.

  19. The moving mesh code SHADOWFAX

    NASA Astrophysics Data System (ADS)

    Vandenbroucke, B.; De Rijcke, S.

    2016-07-01

    We introduce the moving mesh code SHADOWFAX, which can be used to evolve a mixture of gas, subject to the laws of hydrodynamics and gravity, and any collisionless fluid only subject to gravity, such as cold dark matter or stars. The code is written in C++ and its source code is made available to the scientific community under the GNU Affero General Public Licence. We outline the algorithm and the design of our implementation, and demonstrate its validity through the results of a set of basic test problems, which are also part of the public version. We also compare SHADOWFAX with a number of other publicly available codes using different hydrodynamical integration schemes, illustrating the advantages and disadvantages of the moving mesh technique.

  20. All-quad meshing without cleanup

    SciTech Connect

    Rushdi, Ahmad A.; Mitchell, Scott A.; Mahmoud, Ahmed H.; Bajaj, Chandrajit C.; Ebeida, Mohamed S.

    2016-08-22

    Here, we present an all-quad meshing algorithm for general domains. We start with a strongly balanced quadtree. In contrast to snapping the quadtree corners onto the geometric domain boundaries, we move them away from the geometry. Then we intersect the moved grid with the geometry. The resulting polygons are converted into quads with midpoint subdivision. Moving away avoids creating any flat angles, either at a quadtree corner or at a geometry–quadtree intersection. We are able to handle two-sided domains, and more complex topologies than prior methods. The algorithm is provably correct and robust in practice. It is cleanup-free, meaning we have angle and edge length bounds without the use of any pillowing, swapping, or smoothing. Thus, our simple algorithm is fast and predictable. This paper has better quality bounds, and the algorithm is demonstrated over more complex domains, than our prior version.

  1. Mesh segmentation with concavity-aware fields.

    PubMed

    Au, Oscar Kin-Chung; Zheng, Youyi; Chen, Menglin; Xu, Pengfei; Tai, Chiew-Lan

    2012-07-01

    This paper presents a simple and efficient automatic mesh segmentation algorithm that solely exploits the shape concavity information. The method locates concave creases and seams using a set of concavity-sensitive scalar fields. These fields are computed by solving a Laplacian system with a novel concavity-sensitive weighting scheme. Isolines sampled from the concavity-aware fields naturally gather at concave seams, serving as good cutting boundary candidates. In addition, the fields provide sufficient information allowing efficient evaluation of the candidate cuts. We perform a summarization of all field gradient magnitudes to define a score for each isoline and employ a score-based greedy algorithm to select the best cuts. Extensive experiments and quantitative analysis have shown that the quality of our segmentations are better than or comparable with existing state-of-the-art more complex approaches.

  2. All-quad meshing without cleanup

    DOE PAGES

    Rushdi, Ahmad A.; Mitchell, Scott A.; Mahmoud, Ahmed H.; ...

    2016-08-22

    Here, we present an all-quad meshing algorithm for general domains. We start with a strongly balanced quadtree. In contrast to snapping the quadtree corners onto the geometric domain boundaries, we move them away from the geometry. Then we intersect the moved grid with the geometry. The resulting polygons are converted into quads with midpoint subdivision. Moving away avoids creating any flat angles, either at a quadtree corner or at a geometry–quadtree intersection. We are able to handle two-sided domains, and more complex topologies than prior methods. The algorithm is provably correct and robust in practice. It is cleanup-free, meaning wemore » have angle and edge length bounds without the use of any pillowing, swapping, or smoothing. Thus, our simple algorithm is fast and predictable. This paper has better quality bounds, and the algorithm is demonstrated over more complex domains, than our prior version.« less

  3. Unstructured mesh algorithms for aerodynamic calculations

    NASA Technical Reports Server (NTRS)

    Mavriplis, D. J.

    1992-01-01

    The use of unstructured mesh techniques for solving complex aerodynamic flows is discussed. The principle advantages of unstructured mesh strategies, as they relate to complex geometries, adaptive meshing capabilities, and parallel processing are emphasized. The various aspects required for the efficient and accurate solution of aerodynamic flows are addressed. These include mesh generation, mesh adaptivity, solution algorithms, convergence acceleration, and turbulence modeling. Computations of viscous turbulent two-dimensional flows and inviscid three-dimensional flows about complex configurations are demonstrated. Remaining obstacles and directions for future research are also outlined.

  4. Three-dimensional resistivity structure of Asama Volcano revealed by data-space magnetotelluric inversion using unstructured tetrahedral elements

    NASA Astrophysics Data System (ADS)

    Usui, Yoshiya; Ogawa, Yasuo; Aizawa, Koki; Kanda, Wataru; Hashimoto, Takeshi; Koyama, Takao; Yamaya, Yusuke; Kagiyama, Tsuneomi

    2017-03-01

    Asama Volcano is an andesitic composite volcano and one of the most active volcanoes in Japan. In order to reveal electrical resistivity structure beneath the volcano accurately, we performed a 3-D inversion of dense magnetotelluric survey data. In order to prevent misinterpretation of the subsurface resistivity due to the steep topography around Asama Volcano, we used an unstructured tetrahedral mesh to represent the topography. Furthermore, we reduced the calculation time by transforming the inverse problem from the model space into the data space. Comparison of the new data-space method to the original model-space method showed that the calculation time required to update the model parameters was reduced as a result of the transformation, whereas the resistivity structure obtained remained unchanged. In the subsurface resistivity structure around Asama Volcano that was estimated from the inversion, resistive bodies were discovered to be located under the old eruption centres. In particular, under the 24 ka collapse caldera to the west of the presently active crater, a spherical resistive body was found to exist in isolation. In addition, there was a widespread conductive layer below the resistive surface layer. By comparison with previous hydrological and geochemical studies, the conductive layer was interpreted as being a high-water-content layer and an overlying layer rich in altered clay minerals. Because the western part of the volcanic conduit was considered to be the resistive area, which is inferred to consist of unfractured rocks with lower permeability than their surroundings, it would appear that the area obstructs the westward flow of the hydrothermal fluid beneath the summit, thereby contributing to higher concentrations of SO42- and Cl- in the spring water at the northern and eastern feet as well as the uneven location of a diffuse CO2 anomaly.

  5. Adaptive Mesh Refinement in CTH

    SciTech Connect

    Crawford, David

    1999-05-04

    This paper reports progress on implementing a new capability of adaptive mesh refinement into the Eulerian multimaterial shock- physics code CTH. The adaptivity is block-based with refinement and unrefinement occurring in an isotropic 2:1 manner. The code is designed to run on serial, multiprocessor and massive parallel platforms. An approximate factor of three in memory and performance improvements over comparable resolution non-adaptive calculations has-been demonstrated for a number of problems.

  6. Grating droplets with a mesh

    NASA Astrophysics Data System (ADS)

    Soto, Dan; Le Helloco, Antoine; Clanet, Cristophe; Quere, David; Varanasi, Kripa

    2016-11-01

    A drop thrown against a mesh can pass through its holes if impacting with enough inertia. As a result, although part of the droplet may remain on one side of the sieve, the rest will end up grated through the other side. This inexpensive method to break up millimetric droplets into micrometric ones may be of particular interest in a wide variety of applications: enhancing evaporation of droplets launched from the top of an evaporative cooling tower or preventing drift of pesticides sprayed above crops by increasing their initial size and atomizing them at the very last moment with a mesh. In order to understand how much liquid will be grated we propose in this presentation to start first by studying a simpler situation: a drop impacting a plate pierced with a single off centered hole. The study of the role of natural parameters such as the radius drop and speed or the hole position, size and thickness allows us to discuss then the more general situation of a plate pierced with multiple holes: the mesh.

  7. Dynamic Rupture Modeling in Three Dimensions on Unstructured Meshes Using a Discontinuous Galerkin Method

    NASA Astrophysics Data System (ADS)

    Pelties, C.; Käser, M.

    2010-12-01

    We will present recent developments concerning the extensions of the ADER-DG method to solve three dimensional dynamic rupture problems on unstructured tetrahedral meshes. The simulation of earthquake rupture dynamics and seismic wave propagation using a discontinuous Galerkin (DG) method in 2D was recently presented by J. de la Puente et al. (2009). A considerable feature of this study regarding spontaneous rupture problems was the combination of the DG scheme and a time integration method using Arbitrarily high-order DERivatives (ADER) to provide high accuracy in space and time with the discretization on unstructured meshes. In the resulting discrete velocity-stress formulation of the elastic wave equations variables are naturally discontinuous at the interfaces between elements. The so-called Riemann problem can then be solved to obtain well defined values of the variables at the discontinuity itself. This is in particular valid for the fault at which a certain friction law has to be evaluated. Hence, the fault’s geometry is honored by the computational mesh. This way, complex fault planes can be modeled adequately with small elements while fast mesh coarsening is possible with increasing distance from the fault. Due to the strict locality of the scheme using only direct neighbor communication, excellent parallel behavior can be observed. A further advantage of the scheme is that it avoids spurious high-frequency contributions in the slip rate spectra and therefore does not require artificial Kelvin-Voigt damping or filtering of synthetic seismograms. In order to test the accuracy of the ADER-DG method the Southern California Earthquake Center (SCEC) benchmark for spontaneous rupture simulations was employed. Reference: J. de la Puente, J.-P. Ampuero, and M. Käser (2009), Dynamic rupture modeling on unstructured meshes using a discontinuous Galerkin method, JOURNAL OF GEOPHYSICAL RESEARCH, VOL. 114, B10302, doi:10.1029/2008JB006271

  8. SHARP/PRONGHORN Interoperability: Mesh Generation

    SciTech Connect

    Avery Bingham; Javier Ortensi

    2012-09-01

    Progress toward collaboration between the SHARP and MOOSE computational frameworks has been demonstrated through sharing of mesh generation and ensuring mesh compatibility of both tools with MeshKit. MeshKit was used to build a three-dimensional, full-core very high temperature reactor (VHTR) reactor geometry with 120-degree symmetry, which was used to solve a neutron diffusion critical eigenvalue problem in PRONGHORN. PRONGHORN is an application of MOOSE that is capable of solving coupled neutron diffusion, heat conduction, and homogenized flow problems. The results were compared to a solution found on a 120-degree, reflected, three-dimensional VHTR mesh geometry generated by PRONGHORN. The ability to exchange compatible mesh geometries between the two codes is instrumental for future collaboration and interoperability. The results were found to be in good agreement between the two meshes, thus demonstrating the compatibility of the SHARP and MOOSE frameworks. This outcome makes future collaboration possible.

  9. Prospective randomized controlled study using polyethylene mesh for inguinal hernia meshplasty as a safe and cost-effective alternative to polypropylene mesh.

    PubMed

    Gundre, Nitin P; Iyer, Sandhya P; Subramaniyan, Prabhakar

    2012-03-01

    Most patients who come to a general hospital in a developing country are poor. The most important prohibiting factor for use of polypropylene mesh in hernia repair is its exorbitant cost. Hence, research workers have been on the lookout for an equally effective but economically affordable mesh. Worldwide, surgical repair of inguinal hernia is the most common general surgery procedure performed at the present. Lifetime risk of groin hernia is 15% in males and 5% in females. Most of the patients who visit a general hospital are from either lower middle class or poor socioeconomic strata. The most important prohibiting factor for use of polypropylene mesh in hernia repair for the common man is its exorbitant cost. The aim of this study is to document the feasibility, safety and cost-effectiveness of the use of polyethylene mesh. A single blind, prospective, randomized controlled study, comparing 35 patients of two groups was conducted in a tertiary teaching hospital over a period of 5 years. The patients in both groups underwent inguinal hernioplasty, and were administered similar antibiotics and analgesics. The postoperative course with regard to pain, seroma formation, infection, hospital stay, recurrence and scar quality was evaluated and compared. Statistical analysis was performed with Chi square test. The properties of both meshes were the same with respect to ease of handling, pain score, seroma formation, infection rate, resumption of daily activities, scar quality and mesh rejection. Recurrence rate was zero for both groups. Polyethylene mesh was 2,808 times cheaper than the commercially available polypropylene mesh. This study proved the safety, simplicity, efficacy and cost-effectiveness of polyethylene mesh for inguinal hernia meshplasty, insuring economical, accessible health care for the financially weak section of the population.

  10. Recent progress on fully analytic mesh based computer-generated holography

    NASA Astrophysics Data System (ADS)

    Park, Jae-Hyeung

    2016-10-01

    Computer generated holography plays a main role in the contents generation for holographic displays and digital archiving of three-dimensional objects. The fully analytic mesh based computer generated holography finds exact complex optical field for each triangular mesh of the three-dimensional objects for given sampling interval in the hologram plane without any approximation, enhancing the quality of the reconstruction. The mesh based processing rather than conventional point based one makes it compatible with most computer graphics techniques and efficient especially for large objects. In this paper, we present a few recent progress on fully analytic mesh based computer generated holography techniques including the dark line artifact removal, continuous shading of each mesh surface, the implementation of the angular reflectance distribution of the object surface and application of the texture map.

  11. h-Refinement for simple corner balance scheme of SN transport equation on distorted meshes

    NASA Astrophysics Data System (ADS)

    Yang, Rong; Yuan, Guangwei

    2016-11-01

    The transport sweep algorithm is a common method for solving discrete ordinate transport equation, but it breaks down once a concave cell appears in spatial meshes. To deal with this issue a local h-refinement for simple corner balance (SCB) scheme of SN transport equation on arbitrary quadrilateral meshes is presented in this paper by using a new subcell partition. It follows that a hybrid mesh with both triangle and quadrilateral cells is generated, and the geometric quality of these cells improves, especially it is ensured that all cells become convex. Combining with the original SCB scheme, an adaptive transfer algorithm based on the hybrid mesh is constructed. Numerical experiments are presented to verify the utility and accuracy of the new algorithm, especially for some application problems such as radiation transport coupled with Lagrangian hydrodynamic flow. The results show that it performs well on extremely distorted meshes with concave cells, on which the original SCB scheme does not work.

  12. Automatic generation of endocardial surface meshes with 1-to-1 correspondence from cine-MR images

    NASA Astrophysics Data System (ADS)

    Su, Yi; Teo, S.-K.; Lim, C. W.; Zhong, L.; Tan, R. S.

    2015-03-01

    In this work, we develop an automatic method to generate a set of 4D 1-to-1 corresponding surface meshes of the left ventricle (LV) endocardial surface which are motion registered over the whole cardiac cycle. These 4D meshes have 1- to-1 point correspondence over the entire set, and is suitable for advanced computational processing, such as shape analysis, motion analysis and finite element modelling. The inputs to the method are the set of 3D LV endocardial surface meshes of the different frames/phases of the cardiac cycle. Each of these meshes is reconstructed independently from border-delineated MR images and they have no correspondence in terms of number of vertices/points and mesh connectivity. To generate point correspondence, the first frame of the LV mesh model is used as a template to be matched to the shape of the meshes in the subsequent phases. There are two stages in the mesh correspondence process: (1) a coarse matching phase, and (2) a fine matching phase. In the coarse matching phase, an initial rough matching between the template and the target is achieved using a radial basis function (RBF) morphing process. The feature points on the template and target meshes are automatically identified using a 16-segment nomenclature of the LV. In the fine matching phase, a progressive mesh projection process is used to conform the rough estimate to fit the exact shape of the target. In addition, an optimization-based smoothing process is used to achieve superior mesh quality and continuous point motion.

  13. DNA tetrahedral scaffolds-based platform for the construction of electrochemiluminescence biosensor.

    PubMed

    Feng, Qiu-Mei; Zhou, Zhen; Li, Mei-Xing; Zhao, Wei; Xu, Jing-Juan; Chen, Hong-Yuan

    2017-04-15

    Proximal metallic nanoparticles (NPs) could quench the electrochemiluminescence (ECL) emission of semiconductor quantum dots (QDs) due to Förster energy transfer (FRET), but at a certain distance, the coupling of light-emission with surface plasmon resonance (SPR) result in enhanced ECL. Thus, the modification strategies and distances control between QDs and metallic NPs are critical for the ECL intensity of QDs. In this strategy, a SPR enhanced ECL sensor based on DNA tetrahedral scaffolds modified platform was reported for the detection of telomerase activity. Due to the rigid three-dimensional structure, DNA tetrahedral scaffolds grafting on the electrode surface could accurately modulate the distance between CdS QDs and luminol labelled gold nanoparticles (L-Au NPs), meanwhile provide an enhanced spatial dimension and accessibility for the assembly of multiple L-Au NPs. The ECL intensities of both CdS QDs (-1.25V vs. SCE) and luminol (+0.33V vs. SCE) gradually increased along with the formation of multiple L-Au NPs at the vertex of DNA tetrahedral scaffolds induced by telomerase, bringing in a dual-potential ECL analysis. The proposed method showed high sensitivity for the identification of telomerase and was successfully applied for the differentiation of cancer cells from normal cells. This work suggests that DNA tetrahedral scaffolds could serve as an excellent choice for the construction of SPR-ECL system.

  14. Fostering Teacher Development to a Tetrahedral Orientation in the Teaching of Chemistry

    ERIC Educational Resources Information Center

    Lewthwaite, Brian; Wiebe, Rick

    2011-01-01

    This paper reports on the initial outcomes from the end of the fourth year of a 5 year research and professional development project to improve chemistry teaching among three cohorts of chemistry teachers in Manitoba, Canada. The project responds to a new curriculum introduction advocating a tetrahedral orientation (Mahaffy, "Journal of…

  15. Mixed-metal chalcogenide tetrahedral clusters with an exo-polyhedral metal fragment.

    PubMed

    Yuvaraj, K; Roy, Dipak Kumar; Anju, V P; Mondal, Bijnaneswar; Varghese, Babu; Ghosh, Sundargopal

    2014-12-07

    The reaction of metal carbonyl compounds with group 6 and 8 metallaboranes led us to report the synthesis and structural characterization of several novel mixed-metal chalcogenide tetrahedral clusters. Thermolysis of arachno-[(Cp*RuCO)2B2H6], 1, and [Os3(CO)12] in the presence of 2-methylthiophene yielded [Cp*Ru(CO)2(μ-H){Os3(CO)9}S], 3, and [Cp*Ru(μ-H){Os3(CO)11}], 4. In a similar fashion, the reaction of [(Cp*Mo)2B5H9], 2, with [Ru3(CO)12] and 2-methylthiophene yielded [Cp*Ru(CO)2(μ-H){Ru3(CO)9}S], 5, and conjuncto-[(Cp*Mo)2B5H8(μ-H){Ru3(CO)9}S], 6. Both compounds 3 and 5 can be described as 50-cve (cluster valence electron) mixed-metal chalcogenide clusters, in which a sulfur atom replaces one of the vertices of the tetrahedral core. Compounds 3 and 5 possess a [M3S] tetrahedral core, in which the sulfur is attached to an exo-metal fragment, unique in the [M3S] metal chalcogenide tetrahedral arrangements. All the compounds have been characterized by mass spectrometry, IR, and (1)H, (11)B and (13)C NMR spectroscopy in solution, and the solid state structures were unequivocally established by crystallographic analysis of compounds 3, 5 and 6.

  16. A Review of Defects and Disorder in Multinary Tetrahedrally Bonded Semiconductors

    SciTech Connect

    Baranowski, Lauryn L.; Zawadzki, Pawel; Lany, Stephan; Toberer, Eric S.; Zakutayev, Andriy

    2016-12-01

    Defects are critical to understanding the electronic properties of semiconducting compounds, for applications such as light-emitting diodes, transistors, photovoltaics, and thermoelectrics. In this review, we describe our work investigating defects in tetrahedrally bonded, multinary semiconductors, and discuss the place of our research within the context of publications by other groups. We applied experimental and theory techniques to understand point defects, structural disorder, and extended antisite defects in one semiconductor of interest for photovoltaic applications, Cu2SnS3. We contrast our findings on Cu2SnS3 with other chemically related Cu-Sn-S compounds, as well as structurally related compounds such as Cu2ZnSnS4 and Cu(In,Ga)Se2. We find that evaluation of point defects alone is not sufficient to understand defect behavior in multinary tetrahedrally bonded semiconductors. In the case of Cu2SnS3 and Cu2ZnSnS4, structural disorder and entropy-driven cation clustering can result in nanoscale compositional inhomogeneities which detrimentally impact the electronic transport. Therefore, it is not sufficient to assess only the point defect behavior of new multinary tetrahedrally bonded compounds; effects such as structural disorder and extended antisite defects must also be considered. Overall, this review provides a framework for evaluating tetrahedrally bonded semiconducting compounds with respect to their defect behavior for photovoltaic and other applications, and suggests new materials that may not be as prone to such imperfections.

  17. A review of defects and disorder in multinary tetrahedrally bonded semiconductors

    NASA Astrophysics Data System (ADS)

    Baranowski, Lauryn L.; Zawadzki, Pawel; Lany, Stephan; Toberer, Eric S.; Zakutayev, Andriy

    2016-12-01

    Defects are critical to understanding the electronic properties of semiconducting compounds, for applications such as light-emitting diodes, transistors, photovoltaics, and thermoelectrics. In this review, we describe our work investigating defects in tetrahedrally bonded, multinary semiconductors, and discuss the place of our research within the context of publications by other groups. We applied experimental and theory techniques to understand point defects, structural disorder, and extended antisite defects in one semiconductor of interest for photovoltaic applications, Cu2SnS3. We contrast our findings on Cu2SnS3 with other chemically related Cu-Sn-S compounds, as well as structurally related compounds such as Cu2ZnSnS4 and Cu(In,Ga)Se2. We find that evaluation of point defects alone is not sufficient to understand defect behavior in multinary tetrahedrally bonded semiconductors. In the case of Cu2SnS3 and Cu2ZnSnS4, structural disorder and entropy-driven cation clustering can result in nanoscale compositional inhomogeneities which detrimentally impact the electronic transport. Therefore, it is not sufficient to assess only the point defect behavior of new multinary tetrahedrally bonded compounds; effects such as structural disorder and extended antisite defects must also be considered. Overall, this review provides a framework for evaluating tetrahedrally bonded semiconducting compounds with respect to their defect behavior for photovoltaic and other applications, and suggests new materials that may not be as prone to such imperfections.

  18. A Novel Coarsening Method for Scalable and Efficient Mesh Generation

    SciTech Connect

    Yoo, A; Hysom, D; Gunney, B

    2010-12-02

    In this paper, we propose a novel mesh coarsening method called brick coarsening method. The proposed method can be used in conjunction with any graph partitioners and scales to very large meshes. This method reduces problem space by decomposing the original mesh into fixed-size blocks of nodes called bricks, layered in a similar way to conventional brick laying, and then assigning each node of the original mesh to appropriate brick. Our experiments indicate that the proposed method scales to very large meshes while allowing simple RCB partitioner to produce higher-quality partitions with significantly less edge cuts. Our results further indicate that the proposed brick-coarsening method allows more complicated partitioners like PT-Scotch to scale to very large problem size while still maintaining good partitioning performance with relatively good edge-cut metric. Graph partitioning is an important problem that has many scientific and engineering applications in such areas as VLSI design, scientific computing, and resource management. Given a graph G = (V,E), where V is the set of vertices and E is the set of edges, (k-way) graph partitioning problem is to partition the vertices of the graph (V) into k disjoint groups such that each group contains roughly equal number of vertices and the number of edges connecting vertices in different groups is minimized. Graph partitioning plays a key role in large scientific computing, especially in mesh-based computations, as it is used as a tool to minimize the volume of communication and to ensure well-balanced load across computing nodes. The impact of graph partitioning on the reduction of communication can be easily seen, for example, in different iterative methods to solve a sparse system of linear equation. Here, a graph partitioning technique is applied to the matrix, which is basically a graph in which each edge is a non-zero entry in the matrix, to allocate groups of vertices to processors in such a way that many of

  19. Resource optimization scheme for multimedia-enabled wireless mesh networks.

    PubMed

    Ali, Amjad; Ahmed, Muhammad Ejaz; Piran, Md Jalil; Suh, Doug Young

    2014-08-08

    Wireless mesh networking is a promising technology that can support numerous multimedia applications. Multimedia applications have stringent quality of service (QoS) requirements, i.e., bandwidth, delay, jitter, and packet loss ratio. Enabling such QoS-demanding applications over wireless mesh networks (WMNs) require QoS provisioning routing protocols that lead to the network resource underutilization problem. Moreover, random topology deployment leads to have some unused network resources. Therefore, resource optimization is one of the most critical design issues in multi-hop, multi-radio WMNs enabled with multimedia applications. Resource optimization has been studied extensively in the literature for wireless Ad Hoc and sensor networks, but existing studies have not considered resource underutilization issues caused by QoS provisioning routing and random topology deployment. Finding a QoS-provisioned path in wireless mesh networks is an NP complete problem. In this paper, we propose a novel Integer Linear Programming (ILP) optimization model to reconstruct the optimal connected mesh backbone topology with a minimum number of links and relay nodes which satisfies the given end-to-end QoS demands for multimedia traffic and identification of extra resources, while maintaining redundancy. We further propose a polynomial time heuristic algorithm called Link and Node Removal Considering Residual Capacity and Traffic Demands (LNR-RCTD). Simulation studies prove that our heuristic algorithm provides near-optimal results and saves about 20% of resources from being wasted by QoS provisioning routing and random topology deployment.

  20. Resource Optimization Scheme for Multimedia-Enabled Wireless Mesh Networks

    PubMed Central

    Ali, Amjad; Ahmed, Muhammad Ejaz; Piran, Md. Jalil; Suh, Doug Young

    2014-01-01

    Wireless mesh networking is a promising technology that can support numerous multimedia applications. Multimedia applications have stringent quality of service (QoS) requirements, i.e., bandwidth, delay, jitter, and packet loss ratio. Enabling such QoS-demanding applications over wireless mesh networks (WMNs) require QoS provisioning routing protocols that lead to the network resource underutilization problem. Moreover, random topology deployment leads to have some unused network resources. Therefore, resource optimization is one of the most critical design issues in multi-hop, multi-radio WMNs enabled with multimedia applications. Resource optimization has been studied extensively in the literature for wireless Ad Hoc and sensor networks, but existing studies have not considered resource underutilization issues caused by QoS provisioning routing and random topology deployment. Finding a QoS-provisioned path in wireless mesh networks is an NP complete problem. In this paper, we propose a novel Integer Linear Programming (ILP) optimization model to reconstruct the optimal connected mesh backbone topology with a minimum number of links and relay nodes which satisfies the given end-to-end QoS demands for multimedia traffic and identification of extra resources, while maintaining redundancy. We further propose a polynomial time heuristic algorithm called Link and Node Removal Considering Residual Capacity and Traffic Demands (LNR-RCTD). Simulation studies prove that our heuristic algorithm provides near-optimal results and saves about 20% of resources from being wasted by QoS provisioning routing and random topology deployment. PMID:25111241

  1. High Performance Woven Mesh Heat Exchangers

    NASA Astrophysics Data System (ADS)

    Wirtz, Richard A.; Li, Chen; Park, Ji-Wook; Xu, Jun

    2002-07-01

    Simple-to-fabricate woven mesh structures, consisting of bonded laminates of two-dimensional plain-weave conductive screens, or three-dimensional orthogonal weaves are described. Geometric equations show that these porous matrices can be fabricated to have a wide range of porosity and a highly anisotropic thermal conductivity vector. A mathematical model of the thermal performance of such a mesh, deployed as a heat exchange surface, is developed. Measurements of pressure drop and overall heat transfer rate are reported and used with the performance model to develop correlation equations of mesh friction factor and Colburn j-factor as a function of coolant properties, mesh characteristics and flow rate through the mesh. A heat exchanger performance analysis delineates conditions where the two mesh technologies offer superior performance.

  2. Mesh networking optimized for robotic teleoperation

    NASA Astrophysics Data System (ADS)

    Hart, Abraham; Pezeshkian, Narek; Nguyen, Hoa

    2012-06-01

    Mesh networks for robot teleoperation pose different challenges than those associated with traditional mesh networks. Unmanned ground vehicles (UGVs) are mobile and operate in constantly changing and uncontrollable environments. Building a mesh network to work well under these harsh conditions presents a unique challenge. The Manually Deployed Communication Relay (MDCR) mesh networking system extends the range of and provides non-line-of-sight (NLOS) communications for tactical and explosive ordnance disposal (EOD) robots currently in theater. It supports multiple mesh nodes, robots acting as nodes, and works with all Internet Protocol (IP)-based robotic systems. Under MDCR, the performance of different routing protocols and route selection metrics were compared resulting in a modified version of the Babel mesh networking protocol. This paper discusses this and other topics encountered during development and testing of the MDCR system.

  3. Are meshes with lightweight construction strong enough?

    PubMed

    Holste, Joerg L

    2005-01-01

    The use of mesh has become essential in the repair of abdominal wall incisional hernias. Suture techniques, reapplied after failure of a primary repair, are characterized by recurrence rates of up to 50 percent, whereas the reinforcement of the abdominal wall with surgical mesh has significantly decreased these rates to <10 percent. This article describes the background for the development of mesh with lightweight construction and physiological biomechanical performance.

  4. Unstructured Polyhedral Mesh Thermal Radiation Diffusion

    SciTech Connect

    Palmer, T.S.; Zika, M.R.; Madsen, N.K.

    2000-07-27

    Unstructured mesh particle transport and diffusion methods are gaining wider acceptance as mesh generation, scientific visualization and linear solvers improve. This paper describes an algorithm that is currently being used in the KULL code at Lawrence Livermore National Laboratory to solve the radiative transfer equations. The algorithm employs a point-centered diffusion discretization on arbitrary polyhedral meshes in 3D. We present the results of a few test problems to illustrate the capabilities of the radiation diffusion module.

  5. [Treatment of paracolostomic hernias using polypropylene mesh].

    PubMed

    Grigoriuk, A A; Ishchenko, V N; Matveev, A V; Kovalev, V A; Krasnobaev, A E; Stuzhin, S A

    2015-01-01

    It was analyzed the results of treatment of 23 patients with large paracolostomic hernias. Twenty patients underwent colostomy suturing and hernial ring Onlay-plasty with polypropylene mesh without tension. Onlay-plasty of hernial ring with own tissues and polypropylene mesh and colostomy reconstruction outside of implant were performed in 3 patients. Onlay-alloplasty with polypropylene mesh "PROLENE" is effective method of treatment of postoperative paracolostomic ventral hernias with colostomy closing as well as with its reconstruction outside of implant.

  6. Floating shock fitting via Lagrangian adaptive meshes

    NASA Technical Reports Server (NTRS)

    Vanrosendale, John

    1995-01-01

    In recent work we have formulated a new approach to compressible flow simulation, combining the advantages of shock-fitting and shock-capturing. Using a cell-centered on Roe scheme discretization on unstructured meshes, we warp the mesh while marching to steady state, so that mesh edges align with shocks and other discontinuities. This new algorithm, the Shock-fitting Lagrangian Adaptive Method (SLAM), is, in effect, a reliable shock-capturing algorithm which yields shock-fitted accuracy at convergence.

  7. Design of electrospinning mesh devices

    NASA Astrophysics Data System (ADS)

    Russo, Giuseppina; Peters, Gerrit W. M.; Solberg, Ramon H. M.; Vittoria, Vittoria

    2012-07-01

    This paper describes the features of new membranes that can act as local biomedical devices owing to their peculiar shape in the form of mesh structure. These materials are designed to provide significant effects to reduce local inflammations and improve the tissue regeneration. Lamellar Hydrotalcite loaded with Diclofenac Sodium (HTLc-DIK) was homogenously dispersed inside a polymeric matrix of Poly-caprolactone (PCL) to manufacture membranes by electrospinning technique. The experimental procedure and the criteria employed have shown to be extremely effective at increasing potentiality and related applications. The employed technique has proved to be very useful to manufacture polymeric fibers with diameters in the range of nano-micro scale. In this work a dedicated collector based on a proprietary technology of IME Technologies and Eindhoven University of Technology (TU/e) was used. It allowed to obtain devices with a macro shape of a 3D-mesh. Atomic Force Microscopy (AFM) highlights a very interesting texture of the electrospun fibers. They show a lamellar morphology that is only slightly modified by the inclusion of the interclay embedded in the devices to control the drug release phenomena.

  8. Method of generating a surface mesh

    SciTech Connect

    Shepherd, Jason F.; Benzley, Steven; Grover, Benjamin T.

    2008-03-04

    A method and machine-readable medium provide a technique to generate and modify a quadrilateral finite element surface mesh using dual creation and modification. After generating a dual of a surface (mesh), a predetermined algorithm may be followed to generate and modify a surface mesh of quadrilateral elements. The predetermined algorithm may include the steps of generating two-dimensional cell regions in dual space, determining existing nodes in primal space, generating new nodes in the dual space, and connecting nodes to form the quadrilateral elements (faces) for the generated and modifiable surface mesh.

  9. Mesh infrastructure for coupled multiprocess geophysical simulations

    SciTech Connect

    Garimella, Rao V.; Perkins, William A.; Buksas, Mike W.; Berndt, Markus; Lipnikov, Konstantin; Coon, Ethan; Moulton, John D.; Painter, Scott L.

    2014-01-01

    We have developed a sophisticated mesh infrastructure capability to support large scale multiphysics simulations such as subsurface flow and reactive contaminant transport at storage sites as well as the analysis of the effects of a warming climate on the terrestrial arctic. These simulations involve a wide range of coupled processes including overland flow, subsurface flow, freezing and thawing of ice rich soil, accumulation, redistribution and melting of snow, biogeochemical processes involving plant matter and finally, microtopography evolution due to melting and degradation of ice wedges below the surface. In addition to supporting the usual topological and geometric queries about the mesh, the mesh infrastructure adds capabilities such as identifying columnar structures in the mesh, enabling deforming of the mesh subject to constraints and enabling the simultaneous use of meshes of different dimensionality for subsurface and surface processes. The generic mesh interface is capable of using three different open source mesh frameworks (MSTK, MOAB and STKmesh) under the hood allowing the developers to directly compare them and choose one that is best suited for the application's needs. We demonstrate the results of some simulations using these capabilities as well as present a comparison of the performance of the different mesh frameworks.

  10. Mesh infrastructure for coupled multiprocess geophysical simulations

    DOE PAGES

    Garimella, Rao V.; Perkins, William A.; Buksas, Mike W.; ...

    2014-01-01

    We have developed a sophisticated mesh infrastructure capability to support large scale multiphysics simulations such as subsurface flow and reactive contaminant transport at storage sites as well as the analysis of the effects of a warming climate on the terrestrial arctic. These simulations involve a wide range of coupled processes including overland flow, subsurface flow, freezing and thawing of ice rich soil, accumulation, redistribution and melting of snow, biogeochemical processes involving plant matter and finally, microtopography evolution due to melting and degradation of ice wedges below the surface. In addition to supporting the usual topological and geometric queries about themore » mesh, the mesh infrastructure adds capabilities such as identifying columnar structures in the mesh, enabling deforming of the mesh subject to constraints and enabling the simultaneous use of meshes of different dimensionality for subsurface and surface processes. The generic mesh interface is capable of using three different open source mesh frameworks (MSTK, MOAB and STKmesh) under the hood allowing the developers to directly compare them and choose one that is best suited for the application's needs. We demonstrate the results of some simulations using these capabilities as well as present a comparison of the performance of the different mesh frameworks.« less

  11. MOAB : a mesh-oriented database.

    SciTech Connect

    Tautges, Timothy James; Ernst, Corey; Stimpson, Clint; Meyers, Ray J.; Merkley, Karl

    2004-04-01

    A finite element mesh is used to decompose a continuous domain into a discretized representation. The finite element method solves PDEs on this mesh by modeling complex functions as a set of simple basis functions with coefficients at mesh vertices and prescribed continuity between elements. The mesh is one of the fundamental types of data linking the various tools in the FEA process (mesh generation, analysis, visualization, etc.). Thus, the representation of mesh data and operations on those data play a very important role in FEA-based simulations. MOAB is a component for representing and evaluating mesh data. MOAB can store structured and unstructured mesh, consisting of elements in the finite element 'zoo'. The functional interface to MOAB is simple yet powerful, allowing the representation of many types of metadata commonly found on the mesh. MOAB is optimized for efficiency in space and time, based on access to mesh in chunks rather than through individual entities, while also versatile enough to support individual entity access. The MOAB data model consists of a mesh interface instance, mesh entities (vertices and elements), sets, and tags. Entities are addressed through handles rather than pointers, to allow the underlying representation of an entity to change without changing the handle to that entity. Sets are arbitrary groupings of mesh entities and other sets. Sets also support parent/child relationships as a relation distinct from sets containing other sets. The directed-graph provided by set parent/child relationships is useful for modeling topological relations from a geometric model or other metadata. Tags are named data which can be assigned to the mesh as a whole, individual entities, or sets. Tags are a mechanism for attaching data to individual entities and sets are a mechanism for describing relations between entities; the combination of these two mechanisms is a powerful yet simple interface for representing metadata or application

  12. Antibiotic Coating of Hernia Meshes: The Next Step Toward Preventing Mesh Infection.

    PubMed

    Majumder, Arnab; Neupane, Ruel; Novitsky, Yuri W

    2015-11-01

    Mesh bacterial colonization/infection remains a critical issue in complex ventral hernia repair. Despite the recent emergence of biologic meshes, current strategies to prevent and treat mesh infection are largely ineffective, often leading to device failure and subsequent explantation along with the associated costs and effect on patient welfare. Unacceptably high rates of morbidity and hernia recurrence following mesh infection highlight the need for innovation in the area of hernia repair for the complex patient. One recent strategy to address such shortcomings is local antibiosis in the form of polymer coatings applied to the mesh itself. Current literature regarding the use of antibiotic-coated hernia mesh is limited but does illustrate the ability of these devices to inhibit bacterial growth and prevent mesh infection in both in vitro and in vivo studies. Although there is a paucity of literature regarding long-term clinical efficacy, this provides opportunity for further inquiry into a promising new development to combat mesh infective complications.

  13. Development and Verification of Unstructured Adaptive Mesh Technique with Edge Compatibility

    NASA Astrophysics Data System (ADS)

    Ito, Kei; Kunugi, Tomoaki; Ohshima, Hiroyuki

    In the design study of the large-sized sodium-cooled fast reactor (JSFR), one key issue is suppression of gas entrainment (GE) phenomena at a gas-liquid interface. Therefore, the authors have been developed a high-precision CFD algorithm to evaluate the GE phenomena accurately. The CFD algorithm has been developed on unstructured meshes to establish an accurate modeling of JSFR system. For two-phase interfacial flow simulations, a high-precision volume-of-fluid algorithm is employed. It was confirmed that the developed CFD algorithm could reproduce the GE phenomena in a simple GE experiment. Recently, the authors have been developed an important technique for the simulation of the GE phenomena in JSFR. That is an unstructured adaptive mesh technique which can apply fine cells dynamically to the region where the GE occurs in JSFR. In this paper, as a part of the development, a two-dimensional unstructured adaptive mesh technique is discussed. In the two-dimensional adaptive mesh technique, each cell is refined isotropically to reduce distortions of the mesh. In addition, connection cells are formed to eliminate the edge incompatibility between refined and non-refined cells. The two-dimensional unstructured adaptive mesh technique is verified by solving well-known lid-driven cavity flow problem. As a result, the two-dimensional unstructured adaptive mesh technique succeeds in providing a high-precision solution, even though poor-quality distorted initial mesh is employed. In addition, the simulation error on the two-dimensional unstructured adaptive mesh is much less than the error on the structured mesh with a larger number of cells.

  14. Preliminary design of a large tetrahedral truss/hexagonal heatshield panel aerobrake

    NASA Technical Reports Server (NTRS)

    Dorsey, John T.; Mikulas, Martin M., Jr.

    1989-01-01

    An aerobrake structural concept is introduced which consists of two primary components: (1) a lightweight erectable tetrahedral support truss; and (2) sandwich hexagonal heatshield panels which, when attached to the truss, form a continuous impermeable aerobraking surface. Generic finite element models and a general analysis procedure to design tetrahedral truss/hexagonal heatshield panel aerobrakes is developed, and values of the aerobrake design parameters which minimize mass and packaging volume for a 120-foot-diameter aerobrake are determined. Sensitivity of the aerobrake design to variations in design parameters is also assessed. The results show that a 120-foot-diameter aerobrake is viable using the concept presented (i.e., the aerobrake mass is less than or equal to 15 percent of the payload spacecraft mass). Minimizing the aerobrake mass (by increasing the number of rings in the support truss) however, leads to aerobrakes with the highest part count.

  15. Tetrahedral DNA nanostructure-based microRNA biosensor coupled with catalytic recycling of the analyte.

    PubMed

    Miao, Peng; Wang, Bidou; Chen, Xifeng; Li, Xiaoxi; Tang, Yuguo

    2015-03-25

    MicroRNAs are not only important regulators of a wide range of cellular processes but are also identified as promising disease biomarkers. Due to the low contents in serum, microRNAs are always difficult to detect accurately . In this study, an electrochemical biosensor for ultrasensitive detection of microRNA based on tetrahedral DNA nanostructure is developed. Four DNA single strands are engineered to form a tetrahedral nanostructure with a pendant stem-loop and modified on a gold electrode surface, which largely enhances the molecular recognition efficiency. Moreover, taking advantage of strand displacement polymerization, catalytic recycling of microRNA, and silver nanoparticle-based solid-state Ag/AgCl reaction, the proposed biosensor exhibits high sensitivity with the limit of detection down to 0.4 fM. This biosensor shows great clinical value and may have practical utility in early diagnosis and prognosis of certain diseases.

  16. Investigation of negative-parity states in Dy156: Search for evidence of tetrahedral symmetry

    DOE PAGES

    Hartley, D. J.; Riedinger, L. L.; Janssens, R. V. F.; ...

    2017-01-20

    In this paper, an experiment populating low/medium-spin states in 156Dy was performed to investigate the possibility of tetrahedral symmetry in this nucleus. In particular, focus was placed on the low-spin, negative-parity states since recent theoretical studies suggest that these may be good candidates for this high-rank symmetry. The states were produced in the 148Nd(12C,4n) reaction and the Gammasphere array was utilized to detect the emitted γ rays. B(E2)/B(E1) ratios of transition probabilities from the low-spin, negative-parity bands were determined and used to interpret whether these structures are best associated with tetrahedral symmetry or, as previously assigned, to octupole vibrations. Finally,more » in addition, several other negative-parity structures were observed to higher spin and two new sequences were established.« less

  17. Investigation of negative-parity states in Dy156 : Search for evidence of tetrahedral symmetry

    DOE PAGES

    Hartley, D. J.; Riedinger, L. L.; Janssens, R. V. F.; ...

    2017-01-01

    An experiment populating low/medium-spin states in 156Dy was performed to investigate the possibility of tetrahedral symmetry in this nucleus. In particular, focus was placed on the low-spin, negative-parity states since recent theoretical studies suggest that these may be good candidates for this high-rank symmetry. The states were produced in the 148Nd(12C,4 n) reaction and the Gammasphere array was utilized to detect the emitted rays. B(E 2) /B(E1) ratios of transition probabilities from the low-spin, negative-parity bands were determined and used to interpret whether these structures are best associated with tetrahedral symmetry or, as previously assigned, to octupole vibrations. Additionally, severalmore » other negative-parity structures were observed to higher spin and two new sequences were established« less

  18. Fostering Teacher Development to a Tetrahedral Orientation in the Teaching of Chemistry

    NASA Astrophysics Data System (ADS)

    Lewthwaite, Brian; Wiebe, Rick

    2011-11-01

    This paper reports on the initial outcomes from the end of the fourth year of a 5 year research and professional development project to improve chemistry teaching among three cohorts of chemistry teachers in Manitoba, Canada. The project responds to a new curriculum introduction advocating a tetrahedral orientation (Mahaffy, Journal of Chemical Education 83(1), 49-55, 2006) to the teaching of chemistry. The project in its entirety is based upon several theoretical models in fostering chemistry teacher development (in particular Bronfenbrenner's bio-ecological model). These models are described, as is the progress made by teachers based upon the use of a Chemistry Teacher Inventory and associated teacher responses. Overall, statistical analysis of perceptions of their own teaching and comments made by teachers suggests they are showing limited development towards a tetrahedral orientation, albeit in a manner consistent with the curriculum. Ongoing research-based activities in this project are also described.

  19. Exploration of tetrahedral structures in silicate cathodes using a motif-network scheme

    PubMed Central

    Zhao, Xin; Wu, Shunqing; Lv, Xiaobao; Nguyen, Manh Cuong; Wang, Cai-Zhuang; Lin, Zijing; Zhu, Zi-Zhong; Ho, Kai-Ming

    2015-01-01

    Using a motif-network search scheme, we studied the tetrahedral structures of the dilithium/disodium transition metal orthosilicates A2MSiO4 with A = Li or Na and M = Mn, Fe or Co. In addition to finding all previously reported structures, we discovered many other different tetrahedral-network-based crystal structures which are highly degenerate in energy. These structures can be classified into structures with 1D, 2D and 3D M-Si-O frameworks. A clear trend of the structural preference in different systems was revealed and possible indicators that affect the structure stabilities were introduced. For the case of Na systems which have been much less investigated in the literature relative to the Li systems, we predicted their ground state structures and found evidence for the existence of new structural motifs. PMID:26497381

  20. Exploration of tetrahedral structures in silicate cathodes using a motif-network scheme

    SciTech Connect

    Zhao, Xin; Wu, Shunqing; Lv, Xiaobao; Nguyen, Manh Cuong; Wang, Cai -Zhuang; Lin, Zijing; Zhu, Zi -Zhong; Ho, Kai -Ming

    2015-10-26

    Using a motif-network search scheme, we studied the tetrahedral structures of the dilithium/disodium transition metal orthosilicates A2MSiO4 with A = Li or Na and M = Mn, Fe or Co. In addition to finding all previously reported structures, we discovered many other different tetrahedral-network-based crystal structures which are highly degenerate in energy. In addition, these structures can be classified into structures with 1D, 2D and 3D M-Si-O frameworks. A clear trend of the structural preference in different systems was revealed and possible indicators that affect the structure stabilities were introduced. For the case of Na systems which have been much less investigated in the literature relative to the Li systems, we predicted their ground state structures and found evidence for the existence of new structural motifs.

  1. A 3D finite-volume scheme for the Euler equations on adaptive tetrahedral grids

    SciTech Connect

    Vijayan, P.; Kallinderis, Y. )

    1994-08-01

    The paper describes the development and application of a new Euler solver for adaptive tetrahedral grids. Spatial discretization uses a finite-volume, node-based scheme that is of central-differencing type. A second-order Taylor series expansion is employed to march the solution in time according to the Lax-Wendroff approach. Special upwind-like smoothing operators for unstructured grids are developed for shock-capturing, as well as for suppression of solution oscillations. The scheme is formulated so that all operations are edge-based, which reduces the computational effort significantly. An adaptive grid algorithm is employed in order to resolve local flow features. This is achieved by dividing the tetrahedral cells locally, guided by a flow feature detection algorithm. Application cases include transonic flow around the ONERA M6 wing and transonic flow past a transport aircraft configuration. Comparisons with experimental data evaluate accuracy of the developed adaptive solver. 31 refs., 33 figs.

  2. Exploration of tetrahedral structures in silicate cathodes using a motif-network scheme.

    PubMed

    Zhao, Xin; Wu, Shunqing; Lv, Xiaobao; Nguyen, Manh Cuong; Wang, Cai-Zhuang; Lin, Zijing; Zhu, Zi-Zhong; Ho, Kai-Ming

    2015-10-26

    Using a motif-network search scheme, we studied the tetrahedral structures of the dilithium/disodium transition metal orthosilicates A2MSiO4 with A = Li or Na and M = Mn, Fe or Co. In addition to finding all previously reported structures, we discovered many other different tetrahedral-network-based crystal structures which are highly degenerate in energy. These structures can be classified into structures with 1D, 2D and 3D M-Si-O frameworks. A clear trend of the structural preference in different systems was revealed and possible indicators that affect the structure stabilities were introduced. For the case of Na systems which have been much less investigated in the literature relative to the Li systems, we predicted their ground state structures and found evidence for the existence of new structural motifs.

  3. Exploration of tetrahedral structures in silicate cathodes using a motif-network scheme

    DOE PAGES

    Zhao, Xin; Wu, Shunqing; Lv, Xiaobao; ...

    2015-10-26

    Using a motif-network search scheme, we studied the tetrahedral structures of the dilithium/disodium transition metal orthosilicates A2MSiO4 with A = Li or Na and M = Mn, Fe or Co. In addition to finding all previously reported structures, we discovered many other different tetrahedral-network-based crystal structures which are highly degenerate in energy. In addition, these structures can be classified into structures with 1D, 2D and 3D M-Si-O frameworks. A clear trend of the structural preference in different systems was revealed and possible indicators that affect the structure stabilities were introduced. For the case of Na systems which have been muchmore » less investigated in the literature relative to the Li systems, we predicted their ground state structures and found evidence for the existence of new structural motifs.« less

  4. Investigation of negative-parity states in 156Dy: Search for evidence of tetrahedral symmetry

    NASA Astrophysics Data System (ADS)

    Hartley, D. J.; Riedinger, L. L.; Janssens, R. V. F.; Majola, S. N. T.; Riley, M. A.; Allmond, J. M.; Beausang, C. W.; Carpenter, M. P.; Chiara, C. J.; Cooper, N.; Curien, D.; Gall, B. J. P.; Garrett, P. E.; Kondev, F. G.; Kulp, W. D.; Lauritsen, T.; McCutchan, E. A.; Miller, D.; Miller, S.; Piot, J.; Redon, N.; Sharpey-Schafer, J. F.; Simpson, J.; Stefanescu, I.; Wang, X.; Werner, V.; Wood, J. L.; Yu, C.-H.; Zhu, S.; Dudek, J.

    2017-01-01

    An experiment populating low/medium-spin states in 156Dy was performed to investigate the possibility of tetrahedral symmetry in this nucleus. In particular, focus was placed on the low-spin, negative-parity states since recent theoretical studies suggest that these may be good candidates for this high-rank symmetry. The states were produced in the 148Nd(12C,4 n ) reaction and the Gammasphere array was utilized to detect the emitted γ rays. B (E 2 )/B (E 1 ) ratios of transition probabilities from the low-spin, negative-parity bands were determined and used to interpret whether these structures are best associated with tetrahedral symmetry or, as previously assigned, to octupole vibrations. In addition, several other negative-parity structures were observed to higher spin and two new sequences were established.

  5. Atomic Scale Picture of the Ion Conduction Mechanism in Tetrahedral Network of Lanthanum Barium Gallate

    SciTech Connect

    Jalarvo, Niina H; Gourdon, Olivier; Bi, Zhonghe; Gout, Delphine J; Ohl, Michael E; Paranthaman, Mariappan Parans

    2013-01-01

    Combined experimental study of impedance spectroscopy, neutron powder diffraction and quasielastic neutron scattering was performed to shed light into the atomic scale ion migration processes in proton and oxide ion conductor; La0.8Ba1.2GaO3.9 . This material consist of tetrahedral GaO4 units, which are rather flexible and rocking motion of these units promotes the ionic migration process. The oxide ion (vacancy) conduction takes place on channels along c axis, involving a single elementary step, which occurs between adjacent tetrahedron (inter-tetrahedron jump). The proton conduction mechanism consists of intra-tetrahedron and inter-tetrahedron elementary processes. The intra-tetrahedron proton transport is the rate-limiting process, with activation energy of 0.44 eV. The rocking motion of the GaO4 tetrahedron aids the inter-tetrahedral proton transport, which has the activation energy of 0.068 eV.

  6. Adaptive mesh refinement in titanium

    SciTech Connect

    Colella, Phillip; Wen, Tong

    2005-01-21

    In this paper, we evaluate Titanium's usability as a high-level parallel programming language through a case study, where we implement a subset of Chombo's functionality in Titanium. Chombo is a software package applying the Adaptive Mesh Refinement methodology to numerical Partial Differential Equations at the production level. In Chombo, the library approach is used to parallel programming (C++ and Fortran, with MPI), whereas Titanium is a Java dialect designed for high-performance scientific computing. The performance of our implementation is studied and compared with that of Chombo in solving Poisson's equation based on two grid configurations from a real application. Also provided are the counts of lines of code from both sides.

  7. Matrix computations on mesh arrays

    SciTech Connect

    Moreno, J.H.

    1989-01-01

    This dissertation addresses the systematic derivation of mesh arrays for matrix computations, in particular realizing the algorithm-specific arrays and mapping algorithms onto class-specific arrays. A data-dependency graph-based transformational method is proposed in a design frame work consisting of two stages, namely algorithm regularization and derivation of arrays. The first stage derives the fully-parallel data-dependency graph (FPG) of an algorithm and transforms this graph into a three-dimensional one with unidirectional nearest-neighbor dependencies (a multi-mesh graph MMG). The second stage transforms the MMG into a two-dimensional G-graph, which is realized as an algorithm-specific array or mapped onto a class-specific array. This stage allows the incorporation of implementation restrictions and the evaluation of tradeoffs in properties of cells, as well as the derivation of arrays for fixed-size data and partitioned problems, while performing optimization of specific performance/cost measures. The proposed method is formalized by presenting a sufficient set of transformations and demonstrating the equivalence of graphs obtained from those transformations. Moreover, it is demonstrated that the MMG representation is always possible, due to the characteristics of the operators. The method has been applied to a collection of matrix algorithms, including matrix multiplication, convolution, matrix decompositions, transitive closure, the Faddeev algorithm, and BBA{sup {minus}1}. The examples show that, in addition to the features listed earlier, this method is easy to apply. Moreover, the method is compared with other techniques, concluding that it is advantageous because it meets evaluation criteria and produces more efficient arrays.

  8. Structured mesh generation with smoothness controls

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In geometrically complex domains, the RL (Ryskin and Leal) orthogonal mesh generation system may cause mesh distortion and overlapping problems when using the “weak constraint” method with specified boundary point distribution for all boundaries. To resolve these problems, an improved RL system with...

  9. 50 CFR 300.110 - Mesh size.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... either with a manual force or using a weight or dynamometer, until it is stopped at the tapering edges by... without using a weight or dynamometer. The mesh size of the net will then be determined in accordance with... for the determination of the mesh size and the net will be remeasured. (A) A weight or...

  10. 50 CFR 300.110 - Mesh size.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... either with a manual force or using a weight or dynamometer, until it is stopped at the tapering edges by... without using a weight or dynamometer. The mesh size of the net will then be determined in accordance with... for the determination of the mesh size and the net will be remeasured. (A) A weight or...

  11. Mesh Sutured Repairs of Abdominal Wall Defects

    PubMed Central

    Lanier, Steven T.; Jordan, Sumanas W.; Miller, Kyle R.; Ali, Nada A.; Stock, Stuart R.

    2016-01-01

    Background: A new closure technique is introduced, which uses strips of macroporous polypropylene mesh as a suture for closure of abdominal wall defects due to failures of standard sutures and difficulties with planar meshes. Methods: Strips of macroporous polypropylene mesh of 2 cm width were passed through the abdominal wall and tied as simple interrupted sutures. The surgical technique and surgical outcomes are presented. Results: One hundred and seven patients underwent a mesh sutured abdominal wall closure. Seventy-six patients had preoperative hernias, and the mean hernia width by CT scan for those with scans was 9.1 cm. Forty-nine surgical fields were clean-contaminated, contaminated, or dirty. Five patients had infections within the first 30 days. Only one knot was removed as an office procedure. Mean follow-up at 234 days revealed 4 recurrent hernias. Conclusions: Mesh sutured repairs reliably appose tissue under tension using concepts of force distribution and resistance to suture pull-through. The technique reduces the amount of foreign material required in comparison to sheet meshes, and avoids the shortcomings of monofilament sutures. Mesh sutured closures seem to be tolerant of bacterial contamination with low hernia recurrence rates and have replaced our routine use of mesh sheets and bioprosthetic grafts. PMID:27757361

  12. 21 CFR 878.3300 - Surgical mesh.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Surgical mesh. 878.3300 Section 878.3300 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES GENERAL AND PLASTIC SURGERY DEVICES Prosthetic Devices § 878.3300 Surgical mesh. (a)...

  13. 21 CFR 878.3300 - Surgical mesh.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Surgical mesh. 878.3300 Section 878.3300 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) MEDICAL DEVICES GENERAL AND PLASTIC SURGERY DEVICES Prosthetic Devices § 878.3300 Surgical mesh. (a)...

  14. Robust diamond meshes with unique wettability properties.

    PubMed

    Yang, Yizhou; Li, Hongdong; Cheng, Shaoheng; Zou, Guangtian; Wang, Chuanxi; Lin, Quan

    2014-03-18

    Robust diamond meshes with excellent superhydrophobic and superoleophilic properties have been fabricated. Superhydrophobicity is observed for water with varying pH from 1 to 14 with good recyclability. Reversible superhydrophobicity and hydrophilicity can be easily controlled. The diamond meshes show highly efficient water-oil separation and water pH droplet transference.

  15. 7th International Meshing Roundtable '98

    SciTech Connect

    Eldred, T.J.

    1998-10-01

    The goal of the 7th International Meshing Roundtable is to bring together researchers and developers from industry, academia, and government labs in a stimulating, open environment for the exchange of technical information related to the meshing process. In the past, the Roundtable has enjoyed significant participation from each of these groups from a wide variety of countries.

  16. Specific recognition of a tetrahedral phosphonamidate transition state analogue group by a recombinant antibody Fab fragment.

    PubMed

    Hua, T D; Lamaty, F; Souriau, C; Rolland-Fulcrand, V; Lazaro, R; Viallefont, P; Lefranc, M P; Weill, M

    1996-06-01

    In order to obtain antibodies able to catalyse a peptide synthesis, a naive combinatorial library of human Fab antibody fragments was screened with the phosphonamidate transition state analogue of the reaction. Several Fab fragments were able to bind the analogue. Competitive binding studies performed with molecules containing representative parts of the hapten showed that two Fabs were able to recognize specifically the tetrahedral phosphorus present in the hapten.

  17. A study of pH-dependence of shrink and stretch of tetrahedral DNA nanostructures.

    PubMed

    Wang, Ping; Xia, Zhiwei; Yan, Juan; Liu, Xunwei; Yao, Guangbao; Pei, Hao; Zuo, Xiaolei; Sun, Gang; He, Dannong

    2015-04-21

    We monitored the shrink and stretch of the tetrahedral DNA nanostructure (TDN) and the i-motif connected TDN structure at pH 8.5 and pH 4.5, and we found that not only the i-motif can change its structure when the pH changes, but also the TDN and the DNA double helix change their structures when the pH changes.

  18. Anomalous properties of liquids for a family of models with short range tetrahedral interactions

    NASA Astrophysics Data System (ADS)

    Buldyrev, Sergey; Franzese, Giancarlo

    2012-02-01

    Liquids with tetrahedral symmetry of the first coordination shell often display anomalous thermodynamic and dynamic behavior. The main reason for these anomalies is that pressurizing such liquids leads to the disordering of this local symmetry by the particles migrating from the second to the first coordination shell. This in some case may lead to the increase of entropy upon pressurizing and consequently to the volume increase upon cooling. Molecular simulations of various models with tetrahedral symmetry are able to reproduce this anomalous behavior. We study a family of simple models in which we can gradually change the degree of tetrahedrality and investigate the associated changes of the phase diagram by discrete molecular dynamics. A molecule in these models consist of a hard sphere and four point particles attached to the center of the hard sphere by directional bonds arranged in tetrahedral geometry. Each of these four particles has a narrow attractive square well so that the particles belonging to different molecules can attract to each other. We also impose a condition which does not allow a point particle in one molecule to include in its attractive well more than one point particle belonging to different molecules. We investigate how the phase diagram of the system depends on the parameters of the models. None of these models has a liquid -liquid phase transition in the accessible region of the phase. However, adding weak attractive square well to the hard sphere, or wider weak attractive square wells to the point particles can create a liquid-liquid critical point. A comparison with other simple models of the anomalous liquids is made.

  19. Laparoscopic sacrocolpopexy: a comparison of Prolene and Tutoplast mesh.

    PubMed

    Loffeld, Cora J W; Thijs, Susanne; Mol, Ben W; Bongers, Marlies Y; Roovers, Jan-Paul W R

    2009-01-01

    A retrospective study was carried out to evaluate which mesh (cadaveric fascia lata (Tutoplast or Prolene mesh) is associated with the best outcome of laparoscopic sacrocolpopexy for vaginal vault prolapse. Nineteen women who had surgery with Tutoplast and 20 who underwent surgery with Prolene were followed and asked to complete the Urogenital Distress Inventory and Defecation Distress Inventory to measure disease-specific quality of life. The women were invited for a follow-up visit for pelvic examination at a mean time of 45 months. There were no significant differences in operating time, blood loss or hospital stay between the groups. The risk of re-intervention because of recurrent prolapse was higher in the Tutoplast group than in the Prolene group (relative risk 2.9 (95% Confidence interval 0.9-9.5)). Women in the Prolene group were significantly more satisfied with the operative result.

  20. Tetrahedral Finite-Volume Solutions to the Navier-Stokes Equations on Complex Configurations

    NASA Technical Reports Server (NTRS)

    Frink, Neal T.; Pirzadeh, Shahyar Z.

    1998-01-01

    A review of the algorithmic features and capabilities of the unstructured-grid flow solver USM3Dns is presented. This code, along with the tetrahedral grid generator, VGRIDns, is being extensively used throughout the U.S. for solving the Euler and Navier-Stokes equations on complex aerodynamic problems. Spatial discretization is accomplished by a tetrahedral cell-centered finite-volume formulation using Roe's upwind flux difference splitting. The fluxes are limited by either a Superbee or MinMod limiter. Solution reconstruction within the tetrahedral cells is accomplished with a simple, but novel, multidimensional analytical formula. Time is advanced by an implicit backward-Euler time-stepping scheme. Flow turbulence effects are modeled by the Spalart-Allmaras one-equation model, which is coupled with a wall function to reduce the number of cells in the near-wall region of the boundary layer. The issues of accuracy and robustness of USM3Dns Navier-Stokes capabilities are addressed for a flat-plate boundary layer, and a full F-16 aircraft with external stores at transonic speed.

  1. Ultrahigh-Resolution {gamma}-Ray Spectroscopy of {sup 156}Gd: A Test of Tetrahedral Symmetry

    SciTech Connect

    Jentschel, M.; Krempel, J.; Urban, W.; Tonev, D.; Petkov, P.; Dudek, J.; Curien, D.; Lauss, B.; Angelis, G. de

    2010-06-04

    Tetrahedral symmetry in strongly interacting systems would establish a new class of quantum effects at subatomic scale. Excited states in {sup 156}Gd that could carry the information about the tetrahedral symmetry were populated in the {sup 155}Gd(n,{gamma}){sup 156}Gd reaction and studied using the GAMS4/5 Bragg spectrometers at the Institut Laue-Langevin. We have identified the 5{sub 1}{sup -{yields}}3{sub 1}{sup -} transition of 131.983(12) keV in {sup 156}Gd and determined its intensity to be 1.9(3)x10{sup -6} per neutron capture. The lifetime {tau}=220{sub -30}{sup +180}fs of the 5{sub 1}{sup -} state in {sup 156}Gd has been measured using the GRID technique. The resulting B(E2)=293{sub -134}{sup +61}Weisskopf unit rate of the 131.983 keV transition provides the intrinsic quadrupole moment of the 5{sub 1}{sup -} state in {sup 156}Gd to be Q{sub 0}=7.1{sub -1.6}{sup +0.7} b. This large value, comparable to the quadrupole moment of the ground state in {sup 156}Gd, gives strong evidence against tetrahedral symmetry in the lowest odd-spin, negative-parity band of {sup 156}Gd.

  2. Automatic Mesh Generation of Hybrid Mesh on Valves in Multiple Positions in Feedline Systems

    NASA Technical Reports Server (NTRS)

    Ross, Douglass H.; Ito, Yasushi; Dorothy, Fredric W.; Shih, Alan M.; Peugeot, John

    2010-01-01

    Fluid flow simulations through a valve often require evaluation of the valve in multiple opening positions. A mesh has to be generated for the valve for each position and compounding. The problem is the fact that the valve is typically part of a larger feedline system. In this paper, we propose to develop a system to create meshes for feedline systems with parametrically controlled valve openings. Herein we outline two approaches to generate the meshes for a valve in a feedline system at multiple positions. There are two issues that must be addressed. The first is the creation of the mesh on the valve for multiple positions. The second is the generation of the mesh for the total feedline system including the valve. For generation of the mesh on the valve, we will describe the use of topology matching and mesh generation parameter transfer. For generation of the total feedline system, we will describe two solutions that we have implemented. In both cases the valve is treated as a component in the feedline system. In the first method the geometry of the valve in the feedline system is replaced with a valve at a different opening position. Geometry is created to connect the valve to the feedline system. Then topology for the valve is created and the portion of the topology for the valve is topology matched to the standard valve in a different position. The mesh generation parameters are transferred and then the volume mesh for the whole feedline system is generated. The second method enables the user to generate the volume mesh on the valve in multiple open positions external to the feedline system, to insert it into the volume mesh of the feedline system, and to reduce the amount of computer time required for mesh generation because only two small volume meshes connecting the valve to the feedline mesh need to be updated.

  3. On the influence of tetrahedral covalent-hybridization on electronic band structure of topological insulators from first principles

    SciTech Connect

    Zhang, X. M.; Xu, G. Z.; Liu, E. K.; Wang, W. H. Wu, G. H.; Liu, Z. Y.

    2015-01-28

    Based on first-principles calculations, we investigate the influence of tetrahedral covalent-hybridization between main-group and transition-metal atoms on the topological band structures of binary HgTe and ternary half-Heusler compounds, respectively. Results show that, for the binary HgTe, when its zinc-blend structure is artificially changed to rock-salt one, the tetrahedral covalent-hybridization will be removed and correspondingly the topologically insulating band character lost. While for the ternary half-Heusler system, the strength of covalent-hybridization can be tuned by varying both chemical compositions and atomic arrangements, and the competition between tetrahedral and octahedral covalent-hybridization has been discussed in details. As a result, we found that a proper strength of tetrahedral covalent-hybridization is probably in favor to realizing the topologically insulating state with band inversion occurring at the Γ point of the Brillouin zone.

  4. Geometric multigrid to accelerate the solution of the quasi-static electric field problem by tetrahedral finite elements.

    PubMed

    Hollaus, K; Weiss, B; Magele, Ch; Hutten, H

    2004-02-01

    The acceleration of the solution of the quasi-static electric field problem considering anisotropic complex conductivity simulated by tetrahedral finite elements of first order is investigated by geometric multigrid.

  5. Refining 3D Earth models by unifying geological and geophysical information on unstructured meshes

    NASA Astrophysics Data System (ADS)

    Lelièvre, P. G.; Carter-McAuslan, A.; Tycholiz, C.; Farquharson, C. G.; Hurich, C. A.

    2012-04-01

    Earth models used for mineral exploration or other subsurface investigations should be consistent with all available geological and geophysical information. Geophysical inversion provides the means to integrate geological information, geophysical survey data, and physical property measurements taken on rock samples. Incorporation of geological information into inversions is always an iterative process. One begins with the geologists' best guess about the Earth (i.e. the geological model) and the models recovered from geophysical inversion may indicate that the geological model should be changed slightly prior to the next iteration of the procedure. In this way, geological and geophysical data can be combined through inversion and we can move towards the creation of a common Earth model consistent with all the available data. As more information is incorporated, the inherent non-uniqueness of the inverse problem is reduced, yielding a higher potential to resolve deeper features that are less well-constrained by the geophysical data alone. Geological ore deposit models are commonly created during delineation drilling. The accuracy of these models is crucial when used to determine if a deposit is economic. 3D geological Earth models typically comprise wireframe surfaces that represent the geological contacts between different rock units. The contacts may be known at points from down-hole intersections and surface mapping, and can be interpolated between boreholes and extrapolated outwards. Contacts may also be interpreted from seismic traces. Wireframe surfaces, comprising tessellated triangular facets, are sufficiently flexible to allow the representation of arbitrarily complicated geological structures. These surfaces can be honoured exactly within fully unstructured 3D volumetric tetrahedral meshes. In contrast, geophysical forward modelling and inversion algorithms typically work with rectilinear meshes when parameterizing the subsurface because this simplifies

  6. Method of modifying a volume mesh using sheet extraction

    DOEpatents

    Borden, Michael J.; Shepherd, Jason F.

    2007-02-20

    A method and machine-readable medium provide a technique to modify a hexahedral finite element volume mesh using dual generation and sheet extraction. After generating a dual of a volume stack (mesh), a predetermined algorithm may be followed to modify the volume mesh of hexahedral elements. The predetermined algorithm may include the steps of determining a sheet of hexahedral mesh elements, generating nodes for merging, and merging the nodes to delete the sheet of hexahedral mesh elements and modify the volume mesh.

  7. Tetrahedral lander

    NASA Technical Reports Server (NTRS)

    Roberts, Michael L. (Inventor)

    1993-01-01

    An apparatus and method is disclosed for decelerating and absorbing impact of a re-entry vehicle suitable for payloads that are relatively light as well as payloads weighing several tons or more. The apparatus includes four inflatable legs displaced equidistantly from each other around a capsule or housing which contains a payload. The legs are inflated at a designated altitude after entering earth's atmosphere to slow the descent of the re-entry vehicle. Connected between each of the four legs are drag inducing surfaces that deploy as the legs inflate. The drag inducing surfaces are triangularly shaped with one such surface being connected between each pair of legs for a total of six drag inducing surfaces. The legs have drag inducing outer surfaces which act to slow the descent of the re-entry vehicle.

  8. Pillowing doublets: Refining a mesh to ensure that faces share at most one edge

    SciTech Connect

    Mitchell, S.A.; Tautges, T.J.

    1995-11-01

    Occasionally one may be confronted by a hexahedral or quadrilateral mesh containing doublets, two faces sharing two edges. In this case, no amount of smoothing will produce a mesh with agreeable element quality: in the planar case, one of these two faces will always have an angle of at least 180 degrees between the two edges. The authors describe a robust scheme for refining a hexahedral or quadrilateral mesh to separate such faces, so that any two faces share at most one edge. Note that this also ensures that two hexahedra share at most one face in the three dimensional case. The authors have implemented this algorithm and incorporated it into the CUBIT mesh generation environment developed at Sandia National Laboratories.

  9. Evolution of the mandibular mesh implant.

    PubMed

    Salyer, K E; Johns, D F; Holmes, R E; Layton, J G

    1977-07-01

    Between 1960 and 1972, the Dallas Veterans Administration Hospital Maxillofacial Research Laboratory developed and made over 150 cast-mesh implants. Successive designs were ovoid, circular, and double-lumened in cross section to improve implant strength, surface area for bioattachment, and adjustability. Sleeves, collars, and bows were employed in the assembly of these implants, with an acrylic condylar head attached when indicated. In 1972, our laboratory developed a mandibular mesh tray, cast in one piece on a single sprue, with preservation of the vertically adjustable ramus. Stainless steel replaced Vitallium because of its greater malleability. Essentially, a lost-wax technique is used to cast the mesh tray. The model of a mandibular segment is duplicated as a refractory model. Mesh wax, made in our own custom-made die, is adapted to the refractory model. The unit is then sprued and invested. The wax is fired our of the mold in a gas furnace. Casting is done by the transferral of molten stainless steel from the crucible to the mold by centrifugal force in an electro-induction casting machine. Other mesh implants that have been developed are made from wire mesh, Dacron mesh, cast Ticonium, and hydroformed titanium.

  10. Central mesh recurrence after incisional hernia repair with Marlex--are the meshes strong enough?

    PubMed

    Langer, C; Neufang, T; Kley, C; Liersch, T; Becker, H

    2001-09-01

    The use of biomaterial meshes in the repair of incisional abdominal wall hernias is now widely accepted internationally. The introduction of synthetic meshes to achieve tension-free repair has led to a satisfactory reduction in the recurrence rate to less than 10%. However, the use of such biomaterials can result in the occurrence of undesirable complications such as increased risk of infection, seromas, restriction of the abdominal wall and failure caused by mesh shrinkage. Additionally, at the time of writing there is much discussion concerning the potential risk of a persistent foreign body reaction directly associated with the meshes with regard to possible malignant transformation. As such, the trend seems to be toward the use of lighter meshes utilizing less non-absorbable material. One particular novel mesh theoretically capable of guaranteeing the necessary mechanical stability uses 70% less biomaterial. Against this background, we report a central mesh recurrence through the mesh following incisional hernia repair with a Marlex mesh. To our knowledge, this is the first description of a central mesh recurrence, and we discuss a possible mechanism with particular emphasis on the required abdominal wall forces both physiologically and after incisional hernia repair.

  11. Mesh optimization for microbial fuel cell cathodes constructed around stainless steel mesh current collectors

    NASA Astrophysics Data System (ADS)

    Zhang, Fang; Merrill, Matthew D.; Tokash, Justin C.; Saito, Tomonori; Cheng, Shaoan; Hickner, Michael A.; Logan, Bruce E.

    Mesh current collectors made of stainless steel (SS) can be integrated into microbial fuel cell (MFC) cathodes constructed of a reactive carbon black and Pt catalyst mixture and a poly(dimethylsiloxane) (PDMS) diffusion layer. It is shown here that the mesh properties of these cathodes can significantly affect performance. Cathodes made from the coarsest mesh (30-mesh) achieved the highest maximum power of 1616 ± 25 mW m -2 (normalized to cathode projected surface area; 47.1 ± 0.7 W m -3 based on liquid volume), while the finest mesh (120-mesh) had the lowest power density (599 ± 57 mW m -2). Electrochemical impedance spectroscopy showed that charge transfer and diffusion resistances decreased with increasing mesh opening size. In MFC tests, the cathode performance was primarily limited by reaction kinetics, and not mass transfer. Oxygen permeability increased with mesh opening size, accounting for the decreased diffusion resistance. At higher current densities, diffusion became a limiting factor, especially for fine mesh with low oxygen transfer coefficients. These results demonstrate the critical nature of the mesh size used for constructing MFC cathodes.

  12. Algebraic surface design and finite element meshes

    NASA Technical Reports Server (NTRS)

    Bajaj, Chandrajit L.

    1992-01-01

    Some of the techniques are summarized which are used in constructing C sup 0 and C sup 1 continuous meshes of low degree, implicitly defined, algebraic surface patches in three dimensional space. These meshes of low degree algebraic surface patches are used to construct accurate computer models of physical objects. These meshes are also used in the finite element simulation of physical phenomena (e.g., heat dissipation, stress/strain distributions, fluid flow characteristics) required in the computer prototyping of both the manufacturability and functionality of the geometric design.

  13. Composite mesh generator for CFD problems

    NASA Astrophysics Data System (ADS)

    Kalinin, E. I.; Mazo, A. B.; Isaev, S. A.

    2016-11-01

    In present paper a brief introduction of HybMesh grid generator which uses composite approach is given. The process of complicated area meshing using HybMesh generator consists of sequential building structured prototype grids in relatively simple geometry, mapping them to a non-regular domains and superposing to assemble resulting grid. Transitional areas between two superposed low level grids are filled with triangular cells. Currently only 2D algorithms of such approach are implemented; 3D grids can only be restored as a result of extrusion or revolution of 2D objects.

  14. Engagement of Metal Debris into Gear Mesh

    NASA Technical Reports Server (NTRS)

    handschuh, Robert F.; Krantz, Timothy L.

    2010-01-01

    A series of bench-top experiments was conducted to determine the effects of metallic debris being dragged through meshing gear teeth. A test rig that is typically used to conduct contact fatigue experiments was used for these tests. Several sizes of drill material, shim stock and pieces of gear teeth were introduced and then driven through the meshing region. The level of torque required to drive the "chip" through the gear mesh was measured. From the data gathered, chip size sufficient to jam the mechanism can be determined.

  15. H(curl) Auxiliary Mesh Preconditioning

    SciTech Connect

    Kolev, T V; Pasciak, J E; Vassilevski, P S

    2006-08-31

    This paper analyzes a two-level preconditioning scheme for H(curl) bilinear forms. The scheme utilizes an auxiliary problem on a related mesh that is more amenable for constructing optimal order multigrid methods. More specifically, we analyze the case when the auxiliary mesh only approximately covers the original domain. The latter assumption is important since it allows for easy construction of nested multilevel spaces on regular auxiliary meshes. Numerical experiments in both two and three space dimensions illustrate the optimal performance of the method.

  16. Adaptive radial basis function mesh deformation using data reduction

    NASA Astrophysics Data System (ADS)

    Gillebaart, T.; Blom, D. S.; van Zuijlen, A. H.; Bijl, H.

    2016-09-01

    Radial Basis Function (RBF) mesh deformation is one of the most robust mesh deformation methods available. Using the greedy (data reduction) method in combination with an explicit boundary correction, results in an efficient method as shown in literature. However, to ensure the method remains robust, two issues are addressed: 1) how to ensure that the set of control points remains an accurate representation of the geometry in time and 2) how to use/automate the explicit boundary correction, while ensuring a high mesh quality. In this paper, we propose an adaptive RBF mesh deformation method, which ensures the set of control points always represents the geometry/displacement up to a certain (user-specified) criteria, by keeping track of the boundary error throughout the simulation and re-selecting when needed. Opposed to the unit displacement and prescribed displacement selection methods, the adaptive method is more robust, user-independent and efficient, for the cases considered. Secondly, the analysis of a single high aspect ratio cell is used to formulate an equation for the correction radius needed, depending on the characteristics of the correction function used, maximum aspect ratio, minimum first cell height and boundary error. Based on the analysis two new radial basis correction functions are derived and proposed. This proposed automated procedure is verified while varying the correction function, Reynolds number (and thus first cell height and aspect ratio) and boundary error. Finally, the parallel efficiency is studied for the two adaptive methods, unit displacement and prescribed displacement for both the CPU as well as the memory formulation with a 2D oscillating and translating airfoil with oscillating flap, a 3D flexible locally deforming tube and deforming wind turbine blade. Generally, the memory formulation requires less work (due to the large amount of work required for evaluating RBF's), but the parallel efficiency reduces due to the limited

  17. Effects on Diagnostic Parameters After Removing Additional Synchronous Gear Meshes

    NASA Technical Reports Server (NTRS)

    Decker, Harry J.

    2003-01-01

    Gear cracks are typically difficult to diagnose with sufficient time before catastrophic damage occurs. Significant damage must be present before algorithms appear to be able to detect the damage. Frequently there are multiple gear meshes on a single shaft. Since they are all synchronous with the shaft frequency, the commonly used synchronous averaging technique is ineffective in removing other gear mesh effects. Carefully applying a filter to these extraneous gear mesh frequencies can reduce the overall vibration signal and increase the accuracy of commonly used vibration metrics. The vibration signals from three seeded fault tests were analyzed using this filtering procedure. Both the filtered and unfiltered vibration signals were then analyzed using commonly used fault detection metrics and compared. The tests were conducted on aerospace quality spur gears in a test rig. The tests were conducted at speeds ranging from 2500 to 5000 revolutions per minute and torques from 184 to 228 percent of design load. The inability to detect these cracks with high confidence results from the high loading which is causing fast fracture as opposed to stable crack growth. The results indicate that these techniques do not currently produce an indication of damage that significantly exceeds experimental scatter.

  18. Anisotropic norm-oriented mesh adaptation for a Poisson problem

    NASA Astrophysics Data System (ADS)

    Brèthes, Gautier; Dervieux, Alain

    2016-10-01

    We present a novel formulation for the mesh adaptation of the approximation of a Partial Differential Equation (PDE). The discussion is restricted to a Poisson problem. The proposed norm-oriented formulation extends the goal-oriented formulation since it is equation-based and uses an adjoint. At the same time, the norm-oriented formulation somewhat supersedes the goal-oriented one since it is basically a solution-convergent method. Indeed, goal-oriented methods rely on the reduction of the error in evaluating a chosen scalar output with the consequence that, as mesh size is increased (more degrees of freedom), only this output is proven to tend to its continuous analog while the solution field itself may not converge. A remarkable quality of goal-oriented metric-based adaptation is the mathematical formulation of the mesh adaptation problem under the form of the optimization, in the well-identified set of metrics, of a well-defined functional. In the new proposed formulation, we amplify this advantage. We search, in the same well-identified set of metrics, the minimum of a norm of the approximation error. The norm is prescribed by the user and the method allows addressing the case of multi-objective adaptation like, for example in aerodynamics, adaptating the mesh for drag, lift and moment in one shot. In this work, we consider the basic linear finite-element approximation and restrict our study to L2 norm in order to enjoy second-order convergence. Numerical examples for the Poisson problem are computed.

  19. Simulation of nonpoint source contamination based on adaptive mesh refinement

    NASA Astrophysics Data System (ADS)

    Kourakos, G.; Harter, T.

    2014-12-01

    Contamination of groundwater aquifers from nonpoint sources is a worldwide problem. Typical agricultural groundwater basins receive contamination from a large array (in the order of ~10^5-6) of spatially and temporally heterogeneous sources such as fields, crops, dairies etc, while the received contaminants emerge at significantly uncertain time lags to a large array of discharge surfaces such as public supply, domestic and irrigation wells and streams. To support decision making in such complex regimes several approaches have been developed, which can be grouped into 3 categories: i) Index methods, ii)regression methods and iii) physically based methods. Among the three, physically based methods are considered more accurate, but at the cost of computational demand. In this work we present a physically based simulation framework which exploits the latest hardware and software developments to simulate large (>>1,000 km2) groundwater basins. First we simulate groundwater flow using a sufficiently detailed mesh to capture the spatial heterogeneity. To achieve optimal mesh quality we combine adaptive mesh refinement with the nonlinear solution for unconfined flow. Starting from a coarse grid the mesh is refined iteratively in the parts of the domain where the flow heterogeneity appears higher resulting in optimal grid. Secondly we simulate the nonpoint source pollution based on the detailed velocity field computed from the previous step. In our approach we use the streamline model where the 3D transport problem is decomposed into multiple 1D transport problems. The proposed framework is applied to simulate nonpoint source pollution in the Central Valley aquifer system, California.

  20. 50 CFR 300.110 - Mesh size.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... will be stretched in the direction of the long diagonal of the meshes. (ii) A gauge as described in.... This distance will be measured perpendicular to the lacings, ropes or codline with the net stretched...

  1. LR: Compact connectivity representation for triangle meshes

    SciTech Connect

    Gurung, T; Luffel, M; Lindstrom, P; Rossignac, J

    2011-01-28

    We propose LR (Laced Ring) - a simple data structure for representing the connectivity of manifold triangle meshes. LR provides the option to store on average either 1.08 references per triangle or 26.2 bits per triangle. Its construction, from an input mesh that supports constant-time adjacency queries, has linear space and time complexity, and involves ordering most vertices along a nearly-Hamiltonian cycle. LR is best suited for applications that process meshes with fixed connectivity, as any changes to the connectivity require the data structure to be rebuilt. We provide an implementation of the set of standard random-access, constant-time operators for traversing a mesh, and show that LR often saves both space and traversal time over competing representations.

  2. A mesh gradient technique for numerical optimization

    NASA Technical Reports Server (NTRS)

    Willis, E. A., Jr.

    1973-01-01

    A class of successive-improvement optimization methods in which directions of descent are defined in the state space along each trial trajectory are considered. The given problem is first decomposed into two discrete levels by imposing mesh points. Level 1 consists of running optimal subarcs between each successive pair of mesh points. For normal systems, these optimal two-point boundary value problems can be solved by following a routine prescription if the mesh spacing is sufficiently close. A spacing criterion is given. Under appropriate conditions, the criterion value depends only on the coordinates of the mesh points, and its gradient with respect to those coordinates may be defined by interpreting the adjoint variables as partial derivatives of the criterion value function. In level 2, the gradient data is used to generate improvement steps or search directions in the state space which satisfy the boundary values and constraints of the given problem.

  3. Lagrange-mesh calculations in momentum space.

    PubMed

    Lacroix, Gwendolyn; Semay, Claude; Buisseret, Fabien

    2012-08-01

    The Lagrange-mesh method is a powerful method to solve eigenequations written in configuration space. It is very easy to implement and very accurate. Using a Gauss quadrature rule, the method requires only the evaluation of the potential at some mesh points. The eigenfunctions are expanded in terms of regularized Lagrange functions which vanish at all mesh points except one. It is shown that this method can be adapted to solve eigenequations written in momentum space, keeping the convenience and the accuracy of the original technique. In particular, the kinetic operator is a diagonal matrix. Observables and wave functions in both configuration space and momentum space can also be easily computed with good accuracy using only eigenfunctions computed in the momentum space. The method is tested with Gaussian and Yukawa potentials, requiring, respectively, a small and a large mesh to reach convergence. Corresponding wave functions in both spaces are compared with each other using the Fourier transform.

  4. Efficiently Sorting Zoo-Mesh Data Sets

    SciTech Connect

    Cook, R; Max, N; Silva, C; Williams, P

    2001-03-26

    The authors describe the SXMPVO algorithm for performing a visibility ordering zoo-meshed polyhedra. The algorithm runs in practice in linear time and the visibility ordering which it produces is exact.

  5. Some mesh generation requirements and methods

    NASA Technical Reports Server (NTRS)

    Dickson, L. J.

    1978-01-01

    Discretized solution algorithms, which find solutions of field equations in a two or three dimensional field, generally use meshes which are fitted to the field boundary to allow convenient formulation of boundary conditions there. A mesh is defined to be the image of a rectangular grid in computational space under a mesh mapping which maps computational space into physical space. It is not necessary that all of computational space be mapped onto the region of interest in physical space. Parts of it can be excised to give a better fit to the boundary. Many different excisions can be made to fit a single boundary; the choice depends on the mesh arrangement desired in the field.

  6. Grid adaption using Chimera composite overlapping meshes

    NASA Technical Reports Server (NTRS)

    Kao, Kai-Hsiung; Liou, Meng-Sing; Chow, Chuen-Yen

    1993-01-01

    The objective of this paper is to perform grid adaptation using composite over-lapping meshes in regions of large gradient to capture the salient features accurately during computation. The Chimera grid scheme, a multiple overset mesh technique, is used in combination with a Navier-Stokes solver. The numerical solution is first converged to a steady state based on an initial coarse mesh. Solution-adaptive enhancement is then performed by using a secondary fine grid system which oversets on top of the base grid in the high-gradient region, but without requiring the mesh boundaries to join in any special way. Communications through boundary interfaces between those separated grids are carried out using tri-linear interpolation. Applications to the Euler equations for shock reflections and to a shock wave/boundary layer interaction problem are tested. With the present method, the salient features are well resolved.

  7. Grid adaptation using chimera composite overlapping meshes

    NASA Technical Reports Server (NTRS)

    Kao, Kai-Hsiung; Liou, Meng-Sing; Chow, Chuen-Yen

    1994-01-01

    The objective of this paper is to perform grid adaptation using composite overlapping meshes in regions of large gradient to accurately capture the salient features during computation. The chimera grid scheme, a multiple overset mesh technique, is used in combination with a Navier-Stokes solver. The numerical solution is first converged to a steady state based on an initial coarse mesh. Solution-adaptive enhancement is then performed by using a secondary fine grid system which oversets on top of the base grid in the high-gradient region, but without requiring the mesh boundaries to join in any special way. Communications through boundary interfaces between those separated grids are carried out using trilinear interpolation. Application to the Euler equations for shock reflections and to shock wave/boundary layer interaction problem are tested. With the present method, the salient features are well-resolved.

  8. Grid adaptation using Chimera composite overlapping meshes

    NASA Technical Reports Server (NTRS)

    Kao, Kai-Hsiung; Liou, Meng-Sing; Chow, Chuen-Yen

    1993-01-01

    The objective of this paper is to perform grid adaptation using composite over-lapping meshes in regions of large gradient to capture the salient features accurately during computation. The Chimera grid scheme, a multiple overset mesh technique, is used in combination with a Navier-Stokes solver. The numerical solution is first converged to a steady state based on an initial coarse mesh. Solution-adaptive enhancement is then performed by using a secondary fine grid system which oversets on top of the base grid in the high-gradient region, but without requiring the mesh boundaries to join in any special way. Communications through boundary interfaces between those separated grids are carried out using tri-linear interpolation. Applications to the Euler equations for shock reflections and to a shock wave/boundary layer interaction problem are tested. With the present method, the salient features are well resolved.

  9. Lithium-6 coated wire mesh neutron detector

    SciTech Connect

    Young, C.A.; Geelhood, B.D.

    1984-11-06

    A neutron detection apparatus is provided which includes a selected number of surfaces of Lithium-6 coated wire mesh and which further includes a gas mixture in contact with each sheet of Lithium-6 coated wire mesh for selectively reacting to charged particles emitted or radiated by the Lithium-6 coated mesh. A container is provided to seal the Lithium-6 coated mesh and the gas mixture in a volume from which water vapor and atmospheric gases are excluded, the container having one or more walls which are transmissive to neutrons. Monitoring equipment in contact with the gas mixture detects the generation of charged particles in the gas mixture and, in response to such charged particles, provides an indication of the flux of neutrons passing through the volume of the detector.

  10. Surface Generation and Cartesian Mesh Support

    NASA Technical Reports Server (NTRS)

    Haimes, Robert

    2004-01-01

    This document serves as the final report for the grant titled Surface Generation and Cartesian Mesh Support . This completed work was in algorithmic research into automatically generating surface triangulations from CAD geometries. NASA's OVERFLOW and Cart3D simulation packages use surface triangulations as an underlying geometry description and the ability to automatically generate these from CAD files (without translation) substantially reduces both the wall-clock time and expertise required to get geometry out of CAD and into mesh generation. This surface meshing was exercised greatly during the Shuttle investigation during the last year with success. The secondary efforts performed in this grant involve work on a visualization system cut-cell handling for Cartesian Meshes with embedded boundaries.

  11. MHD simulations on an unstructured mesh

    SciTech Connect

    Strauss, H.R.; Park, W.; Belova, E.; Fu, G.Y.; Longcope, D.W.; Sugiyama, L.E.

    1998-12-31

    Two reasons for using an unstructured computational mesh are adaptivity, and alignment with arbitrarily shaped boundaries. Two codes which use finite element discretization on an unstructured mesh are described. FEM3D solves 2D and 3D RMHD using an adaptive grid. MH3D++, which incorporates methods of FEM3D into the MH3D generalized MHD code, can be used with shaped boundaries, which might be 3D.

  12. 3D-Meshes aus medizinischen Volumendaten

    NASA Astrophysics Data System (ADS)

    Zelzer, Sascha; Meinzer, Hans-Peter

    Diese Arbeit beschreibt eine template-basierte Methode zur Erzeugung von adaptiven Hexaeder-Meshes aus Volumendaten, welche komplizierte konkave Strukturen aufweisen können. Es wird ein vollständiger Satz von Templates generiert der es erlaubt, die Ränder konkaver Regionen feiner zu zerlegen als angrenzende Bereiche und somit die Gesamtzahl an Hexaeder verringert. Der Algorithmus arbeitet mit beliebigen gelabelten Volumendaten und erzeugt ein adaptives, konformes, reines Hexaeder-Mesh.

  13. Adaptive Mesh Refinement for Microelectronic Device Design

    NASA Technical Reports Server (NTRS)

    Cwik, Tom; Lou, John; Norton, Charles

    1999-01-01

    Finite element and finite volume methods are used in a variety of design simulations when it is necessary to compute fields throughout regions that contain varying materials or geometry. Convergence of the simulation can be assessed by uniformly increasing the mesh density until an observable quantity stabilizes. Depending on the electrical size of the problem, uniform refinement of the mesh may be computationally infeasible due to memory limitations. Similarly, depending on the geometric complexity of the object being modeled, uniform refinement can be inefficient since regions that do not need refinement add to the computational expense. In either case, convergence to the correct (measured) solution is not guaranteed. Adaptive mesh refinement methods attempt to selectively refine the region of the mesh that is estimated to contain proportionally higher solution errors. The refinement may be obtained by decreasing the element size (h-refinement), by increasing the order of the element (p-refinement) or by a combination of the two (h-p refinement). A successful adaptive strategy refines the mesh to produce an accurate solution measured against the correct fields without undue computational expense. This is accomplished by the use of a) reliable a posteriori error estimates, b) hierarchal elements, and c) automatic adaptive mesh generation. Adaptive methods are also useful when problems with multi-scale field variations are encountered. These occur in active electronic devices that have thin doped layers and also when mixed physics is used in the calculation. The mesh needs to be fine at and near the thin layer to capture rapid field or charge variations, but can coarsen away from these layers where field variations smoothen and charge densities are uniform. This poster will present an adaptive mesh refinement package that runs on parallel computers and is applied to specific microelectronic device simulations. Passive sensors that operate in the infrared portion of

  14. Quadrilateral/hexahedral finite element mesh coarsening

    DOEpatents

    Staten, Matthew L; Dewey, Mark W; Scott, Michael A; Benzley, Steven E

    2012-10-16

    A technique for coarsening a finite element mesh ("FEM") is described. This technique includes identifying a coarsening region within the FEM to be coarsened. Perimeter chords running along perimeter boundaries of the coarsening region are identified. The perimeter chords are redirected to create an adaptive chord separating the coarsening region from a remainder of the FEM. The adaptive chord runs through mesh elements residing along the perimeter boundaries of the coarsening region. The adaptive chord is then extracted to coarsen the FEM.

  15. Use of NLM medical subject headings with the MeSH2010 thesaurus in the PORTAL-DOORS system.

    PubMed

    Taswell, Carl

    2010-01-01

    The NLM MeSH Thesaurus has been incorporated for use in the PORTAL-DOORS System (PDS) for resource metadata management on the semantic web. All 25588 descriptor records from the NLM 2010 MeSH Thesaurus have been exposed as web accessible resources by the PDS MeSH2010 Thesaurus implemented as a PDS PORTAL Registry operating as a RESTful web service. Examples of records from the PDS MeSH2010 PORTAL are demonstrated along with their use by records in other PDS PORTAL Registries that reference the concepts from the MeSH2010 Thesaurus. Use of this important biomedical terminology will greatly enhance the quality of metadata content of other PDS records thus improving cross-domain searches between different problem oriented domains and amongst different clinical specialty fields.

  16. TVD differencing on three-dimensional unstructured meshes with monotonicity-preserving correction of mesh skewness

    NASA Astrophysics Data System (ADS)

    Denner, Fabian; van Wachem, Berend G. M.

    2015-10-01

    Total variation diminishing (TVD) schemes are a widely applied group of monotonicity-preserving advection differencing schemes for partial differential equations in numerical heat transfer and computational fluid dynamics. These schemes are typically designed for one-dimensional problems or multidimensional problems on structured equidistant quadrilateral meshes. Practical applications, however, often involve complex geometries that cannot be represented by Cartesian meshes and, therefore, necessitate the application of unstructured meshes, which require a more sophisticated discretisation to account for their additional topological complexity. In principle, TVD schemes are applicable to unstructured meshes, however, not all the data required for TVD differencing is readily available on unstructured meshes, and the solution suffers from considerable numerical diffusion as a result of mesh skewness. In this article we analyse TVD differencing on unstructured three-dimensional meshes, focusing on the non-linearity of TVD differencing and the extrapolation of the virtual upwind node. Furthermore, we propose a novel monotonicity-preserving correction method for TVD schemes that significantly reduces numerical diffusion caused by mesh skewness. The presented numerical experiments demonstrate the importance of accounting for the non-linearity introduced by TVD differencing and of imposing carefully chosen limits on the extrapolated virtual upwind node, as well as the efficacy of the proposed method to correct mesh skewness.

  17. Preliminary design of a large tetrahedral truss/hexagonal panel aerobrake structural system

    NASA Technical Reports Server (NTRS)

    Dorsey, John T.; Mikulas, Martin M., Jr.

    1990-01-01

    This paper introduces an aerobrake structural concept consisting of two primary components: (1) a lightweight erectable tetrahedral support truss, and (2) a heatshield composed of individual sandwich hexagonal panels which, when attached to the truss, function as a continuous aerobraking surface. A general preliminary analysis procedure to design the aerobrake components is developed, and values of the aerobrake design parameters which minimize the mass and packaging volume for a 120-foot-diameter aerobrake are determined. Sensitivity of the aerobrake design to variations in design parameters is also assessed.

  18. A ROBUST ARBITRARILY HIGH ORDER TRANSPORT METHOD OF THE CHARACTERISTIC TYPE FOR UNSTRUCTURED TETRAHEDRAL GRIDS

    SciTech Connect

    R. M. Ferrer; Y. Y. Azmy

    2009-05-01

    We present a robust arbitrarily high order transport method of the characteristic type for unstructured tetrahedral grids. Previously encountered difficulties have been addressed through the reformulation of the method based on coordinate transformations, evaluation of the moments balance relation as a linear system of equations involving the expansion coefficients of the projected basis, and the asymptotic expansion of the integral kernels in the thin cell limit. The proper choice of basis functions for the high-order spatial expansion of the solution is discussed and its effect on problems involving scattering discussed. Numerical tests are presented to illustrate the beneficial effect of these improvements, and the improved robustness they yield.

  19. Island of Rare Earth Nuclei with Tetrahedral and Octahedral Symmetries: Possible Experimental Evidence

    SciTech Connect

    Dudek, J.; Dubray, N.; Pangon, V.; Dobaczewski, J.; Olbratowski, P.; Schunck, N.

    2006-08-18

    Calculations using realistic mean-field methods suggest the existence of nuclear shapes with tetrahedral T{sub d} and/or octahedral O{sub h} symmetries sometimes at only a few hundreds of keV above the ground states in some rare earth nuclei around {sup 156}Gd and {sup 160}Yb. The underlying single-particle spectra manifest exotic fourfold rather than Kramers's twofold degeneracies. The associated shell gaps are very strong, leading to a new form of shape coexistence in many rare earth nuclei. We present possible experimental evidence of the new symmetries based on the published experimental results--although an unambiguous confirmation will require dedicated experiments.

  20. Automatic scheme selection for toolkit hex meshing

    SciTech Connect

    WHITE,DAVID R.; TAUTGES,TIMOTHY J.

    2000-02-17

    Current hexahedral mesh generation techniques rely on a set of meshing tools, which when combined with geometry decomposition leads to an adequate mesh generation process. Of these tools, sweeping tends to be the workhorse algorithm, accounting for at least 50% of most meshing applications. Constraints which must be met for a volume to be sweepable are derived, and it is proven that these constraints are necessary but not sufficient conditions for sweepability. This paper also describes a new algorithm for detecting extruded or sweepable geometries. This algorithm, based on these constraints, uses topological and local geometric information, and is more robust than feature recognition-based algorithms. A method for computing sweep dependencies in volume assemblies is also given. The auto sweep detect and sweep grouping algorithms have been used to reduce interactive user time required to generate all-hexahedral meshes by filtering out non-sweepable volumes needing further decomposition and by allowing concurrent meshing of independent sweep groups. Parts of the auto sweep detect algorithm have also been used to identify independent sweep paths, for use in volume-based interval assignment.

  1. Hybrid Surface Mesh Adaptation for Climate Modeling

    SciTech Connect

    Ahmed Khamayseh; Valmor de Almeida; Glen Hansen

    2008-10-01

    Solution-driven mesh adaptation is becoming quite popular for spatial error control in the numerical simulation of complex computational physics applications, such as climate modeling. Typically, spatial adaptation is achieved by element subdivision (h adaptation) with a primary goal of resolving the local length scales of interest. A second, less-popular method of spatial adaptivity is called “mesh motion” (r adaptation); the smooth repositioning of mesh node points aimed at resizing existing elements to capture the local length scales. This paper proposes an adaptation method based on a combination of both element subdivision and node point repositioning (rh adaptation). By combining these two methods using the notion of a mobility function, the proposed approach seeks to increase the flexibility and extensibility of mesh motion algorithms while providing a somewhat smoother transition between refined regions than is produced by element subdivision alone. Further, in an attempt to support the requirements of a very general class of climate simulation applications, the proposed method is designed to accommodate unstructured, polygonal mesh topologies in addition to the most popular mesh types.

  2. View-dependent progressive mesh coding for graphic streaming

    NASA Astrophysics Data System (ADS)

    Yang, Sheng; Kim, Chang-Su; Kuo, C.-C. Jay

    2001-11-01

    A view-dependent progressive mesh (VDPM) coding algorithm is proposed in this research to facilitate interactive 3D graphics streaming and browsing. The proposed algorithm splits a 3D graphics model into several partitions, progressively compresses each partition, and reorganizes topological and geometrical data to enable the transmission of visible parts with a higher priority. With the real-time streaming protocol (RTSP), the server is informed of the viewing parameters before transmission. Then, the server can adaptively transmit visible parts in detail, while cutting off invisible parts. Experimental results demonstrate that the proposed algorithm reduces the required transmission bandwidth, and exhibits acceptable visual quality even at low bit rates.

  3. Adaptive Mesh Euler Equation Computation of Vortex Breakdown in Delta Wing Flow.

    NASA Astrophysics Data System (ADS)

    Modiano, David Laurence

    A solution method for the three-dimensional Euler equations is formulated and implemented. The solver uses an unstructured mesh of tetrahedral cells and performs adaptive refinement by mesh-point embedding to increase mesh resolution in regions of interesting flow features. The fourth-difference artificial dissipation is increased to a higher order of accuracy using the method of Holmes and Connell. A new method of temporal integration is developed to accelerate the explicit computation of unsteady flows. The solver is applied to the solution of the flow around a sharp edged delta wing, with emphasis on the behavior of the leading edge vortex above the leeside of the wing at high angle of attack, under which conditions the vortex suffers from vortex breakdown. Large deviations in entropy, which indicate vortical regions of the flow, specify the region in which adaptation is performed. Adaptive flow calculations are performed at ten different angles of attack, at seven of which vortex breakdown occurs. The aerodynamic normal force coefficients show excellent agreement with wind tunnel data measured by Jarrah, which demonstrates the importance of adaptation in obtaining an accurate solution. The pitching moment coefficient and the location of vortex breakdown are compared with experimental data measured by Hummel and Srinivasan, with which fairly good agreement is seen in cases in which the location of breakdown is over the wing. A series of unsteady calculations involving a pitching delta wing were performed. The use of the acceleration technique is validated. A hysteresis in the normal force is observed, as in experiments, and a lag in the breakdown position is demonstrated. (Copies available exclusively from MIT Libraries, Rm. 14-0551, Cambridge, MA 02139-4307. Ph. 617 -253-5668; Fax 617-253-1690.).

  4. 50 CFR 622.208 - Minimum mesh size applicable to rock shrimp off Georgia and Florida.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... mesh size applicable to rock shrimp off Georgia and Florida. (a) The minimum mesh size for the cod end...), stretched mesh. This minimum mesh size is required in at least the last 40 meshes forward of the cod...

  5. The 2D and 3D hypersonic flows with unstructured meshes

    NASA Technical Reports Server (NTRS)

    Thareja, Rajiv

    1993-01-01

    Viewgraphs on 2D and 3D hypersonic flows with unstructured meshes are presented. Topics covered include: mesh generation, mesh refinement, shock-shock interaction, velocity contours, mesh movement, vehicle bottom surface, and adapted meshes.

  6. LayTracks3D: A new approach for meshing general solids using medial axis transform

    DOE PAGES

    Quadros, William Roshan

    2015-08-22

    This study presents an extension of the all-quad meshing algorithm called LayTracks to generate high quality hex-dominant meshes of general solids. LayTracks3D uses the mapping between the Medial Axis (MA) and the boundary of the 3D domain to decompose complex 3D domains into simpler domains called Tracks. Tracks in 3D have no branches and are symmetric, non-intersecting, orthogonal to the boundary, and the shortest path from the MA to the boundary. These properties of tracks result in desired meshes with near cube shape elements at the boundary, structured mesh along the boundary normal with any irregular nodes restricted to themore » MA, and sharp boundary feature preservation. The algorithm has been tested on a few industrial CAD models and hex-dominant meshes are shown in the Results section. Work is underway to extend LayTracks3D to generate all-hex meshes.« less

  7. Positive Contrast MRI Techniques for Visualization of Iron-Loaded Hernia Mesh Implants in Patients

    PubMed Central

    Ciritsis, Alexander; Truhn, Daniel; Hansen, Nienke L.; Otto, Jens; Kuhl, Christiane K.; Kraemer, Nils A.

    2016-01-01

    Object In MRI, implants and devices can be delineated via susceptibility artefacts. To discriminate susceptibility voids from proton-free structures, different positive contrast techniques were implemented. The purpose of this study was to evaluate a pulse sequence-based positive contrast technique (PCSI) and a post-processing susceptibility gradient mapping algorithm (SGM) for visualization of iron loaded mesh implants in patients. Material and Methods Five patients with iron-loaded MR-visible inguinal hernia mesh implants were examined at 1.5 Tesla. A gradient echo sequence (GRE; parameters: TR: 8.3ms; TE: 4.3ms; NSA:2; FA:20°; FOV:350mm²) and a PCSI sequence (parameters: TR: 25ms; TE: 4.6ms; NSA:4; FA:20°; FOV:350mm²) with on-resonant proton suppression were performed. SGM maps were calculated using two algorithms. Image quality and mesh delineation were independently evaluated by three radiologists. Results On GRE, the iron-loaded meshes generated distinct susceptibility-induced signal voids. PCSI exhibited susceptibility differences including the meshes as hyperintense signals. SGM exhibited susceptibility differences with positive contrast. Visually, the different algorithms presented no significant differences. Overall, the diagnostic value was rated best in GRE whereas PCSI and SGM were barely “sufficient”. Conclusion Both “positive contrast” techniques depicted implanted meshes with hyperintense signal. SGM comes without additional acquisition time and can therefore be utilized in every patient. PMID:27192201

  8. Method of modifying a volume mesh using sheet insertion

    SciTech Connect

    Borden, Michael J.; Shepherd, Jason F.

    2006-08-29

    A method and machine-readable medium provide a technique to modify a hexahedral finite element volume mesh using dual generation and sheet insertion. After generating a dual of a volume stack (mesh), a predetermined algorithm may be followed to modify (refine) the volume mesh of hexahedral elements. The predetermined algorithm may include the steps of locating a sheet of hexahedral mesh elements, determining a plurality of hexahedral elements within the sheet to refine, shrinking the plurality of elements, and inserting a new sheet of hexahedral elements adjacently to modify the volume mesh. Additionally, another predetermined algorithm using mesh cutting may be followed to modify a volume mesh.

  9. Effect of a concave grid mesh in a carbon nanotube-based field emission X-ray source

    SciTech Connect

    Kim, Hyun Suk; Castro, Edward Joseph D.; Lee, Choong Hun

    2014-10-15

    Highlights: • Successful design using a concave grid mesh for the focusing electron. • Much better X-ray image due to the concave grid mesh. • Higher anode current efficiency using the concave grid mesh versus a flat grid mesh. - Abstract: This study introduces a simple approach to improve the X-ray image quality produced by the carbon nanotube (CNT) field emitter X-ray source by altering the geometrical shape of the grid mesh from the conventional flat shape to a concave one in a typical triode structure. The concave shape of the grid electrode increases the effective number of the grid cells in the mesh, which exerted an electric field in the direction of the emitted electrons, thereby increasing the emission current reaching the anode. Furthermore, the curved mesh (concave grid mesh), which was responsible for the extraction of electrons from the field emitter, exhibited a focusing effect on the electron beam trajectory thereby, reducing the focal spot size impinging on the anode and resulted in a better spatial resolution of the X-ray images produced.

  10. Facial expression reconstruction on the basis of selected vertices of triangle mesh

    NASA Astrophysics Data System (ADS)

    Peszor, Damian; Wojciechowska, Marzena

    2016-06-01

    Facial expression reconstruction is an important issue in the field of computer graphics. While it is relatively easy to create an animation based on meshes constructed through video recordings, this kind of high-quality data is often not transferred to another model because of lack of intermediary, anthropometry-based way to do so. However, if a high-quality mesh is sampled with sufficient density, it is possible to use obtained feature points to encode the shape of surrounding vertices in a way that can be easily transferred to another mesh with corresponding feature points. In this paper we present a method used for obtaining information for the purpose of reconstructing changes in facial surface on the basis of selected feature points.

  11. Structure and mechanical properties of low stress tetrahedral amorphous carbon films prepared by pulsed laser deposition

    NASA Astrophysics Data System (ADS)

    Bonelli, M.; Ferrari, A. C.; Fioravanti, A.; Li Bassi, A.; Miotello, A.; Ossi, P. M.

    2002-02-01

    Tetrahedral amorphous carbon films have been produced by pulsed laser deposition, at a wavelength of 248 nm, ablating highly oriented pyrolytic graphite at room temperature, in a 10-2 Pa vacuum, at fluences ranging between 0.5 and 35 Jcm-2. Both (100) Si wafers and wafers covered with a SiC polycrystalline interlayer were used as substrates. Film structure was investigated by Raman spectroscopy at different excitation wavelength from 633 nm to 229 nm and by transmission Electron Energy Loss Spectroscopy. The films, which are hydrogen-free, as shown by Fourier Transform Infrared Spectroscopy, undergo a transition from mainly disordered graphitic to up to 80% tetrahedral amorphous carbon (ta-C) above a threshold laser fluence of 5 J cm-2. By X-ray reflectivity roughness, density and cross-sectional layering of selected samples were studied. Film hardness as high as 70 GPa was obtained by nanoindentation on films deposited with the SiC interlayer. By scratch test film adhesion and friction coefficients between 0.06 and 0.11 were measured. By profilometry we obtained residual stress values not higher than 2 GPa in as-deposited 80% sp3 ta-C films.

  12. Identifying Vortex-Core-Line using a tetrahedral satellite configuration: Field Topology Approach

    NASA Astrophysics Data System (ADS)

    Jiang, Yao; Lembege, Bertrand; Nishikawa, Ken-ichi; Cai, DongSheng; Hasegawa, Hiroshi

    2016-04-01

    Identifying vortices are the key to understanding the turbulence in plasma shear layers. Here, the term 'vortex' or 'vortex core' is associated with a region of Galilean invariance [Jeong and Hussain, 1995]. Unfortunately, no single precise definition of a vortex is currently universally accepted, despite the fact that many space plasma authors claim that many observations have detected "vortices" (as Kelvin-Helmholtz vortices at/around the magnetopause). By using the four satellite velocity data, and Taylor series, we expand the velocity data around the satellites, calculate its first order tensor, and linearly approximate the field. We can identify the vortex structures by using various vortex identification criteria as follows: (i) The first criterion is Q-criterion that defines vortices as regions in which the vorticity energy prevails other energies; (ii) the second criterion is the lambda2-criterion that is related to the minus of the Hessian matrix of the pressure related term; and (iii) the third criterion requires the existence of vortex-core-lines that is the Galilean invariance inside the four satellite tetrahedral region. Using these methods, we can identify and analyze more precisely the 3D vortex using tetrahedral satellite configuration.

  13. A Reconstructed Discontinuous Galerkin Method for the Compressible Flows on Unstructured Tetrahedral Grids

    SciTech Connect

    Hong Luo; Yidong Xia; Robert Nourgaliev; Chunpei Cai

    2011-06-01

    A reconstruction-based discontinuous Galerkin (RDG) method is presented for the solution of the compressible Navier-Stokes equations on unstructured tetrahedral grids. The RDG method, originally developed for the compressible Euler equations, is extended to discretize viscous and heat fluxes in the Navier-Stokes equations using a so-called inter-cell reconstruction, where a smooth solution is locally reconstructed using a least-squares method from the underlying discontinuous DG solution. Similar to the recovery-based DG (rDG) methods, this reconstructed DG method eliminates the introduction of ad hoc penalty or coupling terms commonly found in traditional DG methods. Unlike rDG methods, this RDG method does not need to judiciously choose a proper form of a recovered polynomial, thus is simple, flexible, and robust, and can be used on unstructured grids. The preliminary results indicate that this RDG method is stable on unstructured tetrahedral grids, and provides a viable and attractive alternative for the discretization of the viscous and heat fluxes in the Navier-Stokes equations.

  14. Octahedral versus tetrahedral coordination of Al in synthetic micas determined by XANES

    SciTech Connect

    Mottana, A.; Ventura, G.D.; Robert, J.L.

    1997-05-01

    We used the JUMBO monochromator at SSRL to measure the Al K-edge X-ray absorption spectra of synthetic micas having variable Al content and occupancy, from 0 to 2/3 in the octahedral M positions, and 0 to 2/3 in the tetrahedral T positions. The measured Al K edges differ markedly, but the differences may have a common explanation: (1) Micas containing 1/3 Al in M or {1/4} Al in T have K edges that differ in the energy and intensity of the first two features, which are related to interaction of Al with its first-shell nearest neighbors (O and OH or F). They are nearly identical to the K edges of reference minerals such as albite (tetrahedral Al only) or grossular (octahedral Al only). (2) Micas containing Al in both M and T have K edges that can be interpreted as a weighed combination of the simple edges. 39 refs., 4 figs., 1 tab.

  15. Artificial intelligence approach to planning the robotic assembly of large tetrahedral truss structures

    NASA Technical Reports Server (NTRS)

    Homemdemello, Luiz S.

    1992-01-01

    An assembly planner for tetrahedral truss structures is presented. To overcome the difficulties due to the large number of parts, the planner exploits the simplicity and uniformity of the shapes of the parts and the regularity of their interconnection. The planning automation is based on the computational formalism known as production system. The global data base consists of a hexagonal grid representation of the truss structure. This representation captures the regularity of tetrahedral truss structures and their multiple hierarchies. It maps into quadratic grids and can be implemented in a computer by using a two-dimensional array data structure. By maintaining the multiple hierarchies explicitly in the model, the choice of a particular hierarchy is only made when needed, thus allowing a more informed decision. Furthermore, testing the preconditions of the production rules is simple because the patterned way in which the struts are interconnected is incorporated into the topology of the hexagonal grid. A directed graph representation of assembly sequences allows the use of both graph search and backtracking control strategies.

  16. Raman Spectroscopic Studies of the High Pressure Behavior of Network Forming Tetrahedral Oxide Glasses.

    NASA Astrophysics Data System (ADS)

    Durben, Daniel John

    The ambient temperature structural and vibrational properties of a series of network forming tetrahedral oxide glasses have been investigated as a function of pressure with Raman spectroscopy. Glass samples were chosen to examine a range of network structures, from the fully polymerized GeO_2, to the partially depolymerized alkali tetrasilicates and disilicates, to the fully depolymerized forsterite. The Raman data suggest that fully polymerized oxide glass structures undergo network cation coordination changes in response to extreme compression through the involvement of bridging oxygens, without requiring bond breaking reactions. Spectral changes observed in partially depolymerized network glass structures are consistent with an increase in Si coordination during compression at the expense of nonbridging oxygens. The pressure range over which the coordination change occurs appears to be controlled by the size and concentration of alkali cations in the structure and depends on a balance between the competing beta-state conversion mechanism at low alkali content and steric considerations at higher alkali content. High pressure structural changes are largely reversible upon decompression, albeit with a large hysteresis. However, the spectra suggest that the breakup of the high coordinated network during the backtransformation to tetrahedral Si coordination occurs without a memory of the original Q -speciation or Si-O ring distribution. Thus, the backtransformation to low coordinated species upon decompression, occurring while the glass is compacted, favors a redistribution of Q-species and ring statistics relative to the original ambient structure.

  17. Parallel Adaptive Mesh Refinement for High-Order Finite-Volume Schemes in Computational Fluid Dynamics

    NASA Astrophysics Data System (ADS)

    Schwing, Alan Michael

    For computational fluid dynamics, the governing equations are solved on a discretized domain of nodes, faces, and cells. The quality of the grid or mesh can be a driving source for error in the results. While refinement studies can help guide the creation of a mesh, grid quality is largely determined by user expertise and understanding of the flow physics. Adaptive mesh refinement is a technique for enriching the mesh during a simulation based on metrics for error, impact on important parameters, or location of important flow features. This can offload from the user some of the difficult and ambiguous decisions necessary when discretizing the domain. This work explores the implementation of adaptive mesh refinement in an implicit, unstructured, finite-volume solver. Consideration is made for applying modern computational techniques in the presence of hanging nodes and refined cells. The approach is developed to be independent of the flow solver in order to provide a path for augmenting existing codes. It is designed to be applicable for unsteady simulations and refinement and coarsening of the grid does not impact the conservatism of the underlying numerics. The effect on high-order numerical fluxes of fourth- and sixth-order are explored. Provided the criteria for refinement is appropriately selected, solutions obtained using adapted meshes have no additional error when compared to results obtained on traditional, unadapted meshes. In order to leverage large-scale computational resources common today, the methods are parallelized using MPI. Parallel performance is considered for several test problems in order to assess scalability of both adapted and unadapted grids. Dynamic repartitioning of the mesh during refinement is crucial for load balancing an evolving grid. Development of the methods outlined here depend on a dual-memory approach that is described in detail. Validation of the solver developed here against a number of motivating problems shows favorable

  18. Automatic finite-element mesh generation using artificial neural networks. Part 1: Prediction of mesh density

    SciTech Connect

    Chedid, R.; Najjar, N.

    1996-09-01

    One of the inconveniences associated with the existing finite-element packages is the need for an educated user to develop a correct mesh at the preprocessing level. Procedures which start with a coarse mesh and attempt serious refinements, as is the case in most adaptive finite-element packages, are time consuming and costly. Hence, it is very important to develop a tool that can provide a mesh that either leads immediately to an acceptable solution, or would require fewer correcting steps to achieve better results. In this paper, the authors present a technique for automatic mesh generation based on artificial neural networks (ANN). The essence of this technique is to predict the mesh density distribution of a given model, and then supply this information to a Kohonen neural network which provides the final mesh. Prediction of mesh density is accomplished by a simple feedforward neural network which has the ability to learn the relationship between mesh density and model geometric features. It will be shown that ANN are able to recognize delicate areas where a sharp variation of the magnetic field is expected. Examples of 2-D models are provided to illustrate the usefulness of the proposed technique.

  19. A nanobursa mesh: a graded electrospun nanofiber mesh with metal nanoparticles on carbon nanotubes

    NASA Astrophysics Data System (ADS)

    Senturk-Ozer, Semra; Chen, Tao; Degirmenbasi, Nebahat; Gevgilili, Halil; Podkolzin, Simon G.; Kalyon, Dilhan M.

    2014-07-01

    A new type of material, a ``nanobursa'' mesh (from ``bursa'' meaning ``sac or pouch''), is introduced. This material consists of sequential layers of porous polymeric nanofibers encapsulating carbon nanotubes, which are functionalized with different metal nanoparticles in each layer. The nanobursa mesh is fabricated via a novel combination of twin-screw extrusion and electrospinning. Use of this hybrid process at industrially-relevant rates is demonstrated by producing a nanobursa mesh with graded layers of Pd, Co, Ag, and Pt nanoparticles. The potential use of the fabricated nanobursa mesh is illustrated by modeling of catalytic hydrocarbon oxidation.A new type of material, a ``nanobursa'' mesh (from ``bursa'' meaning ``sac or pouch''), is introduced. This material consists of sequential layers of porous polymeric nanofibers encapsulating carbon nanotubes, which are functionalized with different metal nanoparticles in each layer. The nanobursa mesh is fabricated via a novel combination of twin-screw extrusion and electrospinning. Use of this hybrid process at industrially-relevant rates is demonstrated by producing a nanobursa mesh with graded layers of Pd, Co, Ag, and Pt nanoparticles. The potential use of the fabricated nanobursa mesh is illustrated by modeling of catalytic hydrocarbon oxidation. Electronic supplementary information (ESI) available: Experimental methods and computational details. See DOI: 10.1039/c4nr01145g

  20. MESH Pakistan: Prospects and Challenges

    ERIC Educational Resources Information Center

    Leask, Marilyn; Jumani, Nabi Bux

    2015-01-01

    The Organisation for Economic Co-operation and Development periodically surveys teaching and learning issues (the TALIS surveys) in the most developed countries. In their 2009 report, they commented that although teacher quality is the fundamental component in high performing systems, the education sector has been slow to develop systemic…

  1. Formation of a chronic pain syndrome due to mesh shrinkage after laparoscopic intraperitoneal onlay mesh (IPOM).

    PubMed

    Klein, Fritz; Ospina, Carlos; Rudolph, Birgit; Wüstefeld, Joost; Denecke, Timm; Neuhaus, Peter; Schmidt, Sven-Christian

    2012-10-01

    The case of a 58-year-old male patient who developed a chronic pain syndrome after laparoscopic intraperitoneal onlay mesh for treatment of a large symptomatic umbilical hernia combined with rectus diastasis is reported. Twelve months after an uncomplicated initial surgery, the patient presented with progressive signs of a foreign body sensation and pain in the anterior abdominal wall. Computed tomography examination revealed no pathologic findings but a marked shrinkage of the mesh implant. Because of further progressive symptoms, explorative laparotomy was performed. Mesh shrinkage and adhesions with a surrounding chronic tissue reaction were found as the cause of the pain syndrome. This case demonstrates a case of a chronic pain syndrome due to mesh shrinkage 12 months after initial ventral hernia repair. Mesh shrinkage should therefore be taken into consideration in patients with progressive pain chronic syndromes after laparoscopic ventral hernia repair.

  2. The Graft Tool: An All-Hexahedral Transition Algorithm for Creating a Multi-Directional Swept Volume Mesh

    SciTech Connect

    BENZLEY,STEVEN E.; JANKOVICH,STEVEN R.; MITCHELL,SCOTT A.; SHEPHERD,JASON F.

    1999-09-27

    Sweeping algorithms have become very mature and can create a semi-structured mesh on a large set of solids. However, these algorithms require that all linking surfaces be mappable or submappable. This restriction excludes solids with imprints or protrusions on the linking surfaces. The grafting algorithm allows these solids to be swept. It then locally modifies the position and connectivity of the nodes on the linking surfaces to align with the graft surfaces. Once a high-quality surface mesh is formed on the graft surface, it is swept along the branch creating a 2 3/4-D mesh.

  3. 2D nearly orthogonal mesh generation

    NASA Astrophysics Data System (ADS)

    Zhang, Yaoxin; Jia, Yafei; Wang, Sam S. Y.

    2004-11-01

    The Ryskin and Leal (RL) system is the most widely used mesh generation system for the orthogonal mapping. However, when this system is used in domains with complex geometry, particularly in those with sharp corners and strong curvatures, serious distortion or overlapping of mesh lines may occur and an acceptable solution may not be possible. In the present study, two methods are proposed to generate nearly orthogonal meshes with the smoothness control. In the first method, the original RL system is modified by introducing smoothness control functions, which are formulated through the blending of the conformal mapping and the orthogonal mapping; while in the second method, the RL system is modified by introducing the contribution factors. A hybrid system of both methods is also developed. The proposed methods are illustrated by several test examples. Applications of these methods in a natural river channel are demonstrated. It is shown that the modified RL systems are capable of producing meshes with an adequate balance between the orthogonality and the smoothness for complex computational domains without mesh distortions and overlapping.

  4. Hydrophobic meshes for oil spill recovery devices.

    PubMed

    Deng, Da; Prendergast, Daniel P; MacFarlane, John; Bagatin, Roberto; Stellacci, Francesco; Gschwend, Philip M

    2013-02-01

    Widespread use of petrochemicals often leads to accidental releases in aquatic environments, occasionally with disastrous results. We have developed a hydrophobic and oleophilic mesh that separates oil from water continuously in situ via capillary action, providing a means of recovering spilt oil from surface waters. Steel mesh is dip-coated in a xylene solution of low-density polyethylene, creating a hydrophobic surface with tunable roughness and opening size. The hydrophobic mesh allows oil to pass through the openings while preventing the concomitant passage of water. A bench-top prototype demonstrated the efficacy of such an oil recovery device and allowed us to quantify the factors governing the ability of the mesh to separate oil and water. Preliminary data analysis suggested that the oleophilic openings behave somewhat like capillary tubes: the oil flux is inversely proportional to oil viscosity, and directly proportional to the size of the mesh openings. An unpinned meniscus model was found to predict the water intrusion pressure successfully, which increased as the opening size decreased. The trade-off between water intrusion and oil flow rate suggests an optimal pore size for given oil properties and sea conditions.

  5. Floating shock fitting via Lagrangian adaptive meshes

    NASA Technical Reports Server (NTRS)

    Vanrosendale, John

    1994-01-01

    In recent works we have formulated a new approach to compressible flow simulation, combining the advantages of shock-fitting and shock-capturing. Using a cell-centered Roe scheme discretization on unstructured meshes, we warp the mesh while marching to steady state, so that mesh edges align with shocks and other discontinuities. This new algorithm, the Shock-fitting Lagrangian Adaptive Method (SLAM) is, in effect, a reliable shock-capturing algorithm which yields shock-fitted accuracy at convergence. Shock-capturing algorithms like this, which warp the mesh to yield shock-fitted accuracy, are new and relatively untried. However, their potential is clear. In the context of sonic booms, accurate calculation of near-field sonic boom signatures is critical to the design of the High Speed Civil Transport (HSCT). SLAM should allow computation of accurate N-wave pressure signatures on comparatively coarse meshes, significantly enhancing our ability to design low-boom configurations for high-speed aircraft.

  6. Conservative interpolation between general spherical meshes

    NASA Astrophysics Data System (ADS)

    Kritsikis, Evaggelos; Aechtner, Matthias; Meurdesoif, Yann; Dubos, Thomas

    2017-01-01

    An efficient, local, explicit, second-order, conservative interpolation algorithm between spherical meshes is presented. The cells composing the source and target meshes may be either spherical polygons or latitude-longitude quadrilaterals. Second-order accuracy is obtained by piece-wise linear finite-volume reconstruction over the source mesh. Global conservation is achieved through the introduction of a supermesh, whose cells are all possible intersections of source and target cells. Areas and intersections are computed exactly to yield a geometrically exact method. The main efficiency bottleneck caused by the construction of the supermesh is overcome by adopting tree-based data structures and algorithms, from which the mesh connectivity can also be deduced efficiently.The theoretical second-order accuracy is verified using a smooth test function and pairs of meshes commonly used for atmospheric modelling. Experiments confirm that the most expensive operations, especially the supermesh construction, have O(NlogN) computational cost. The method presented is meant to be incorporated in pre- or post-processing atmospheric modelling pipelines, or directly into models for flexible input/output. It could also serve as a basis for conservative coupling between model components, e.g., atmosphere and ocean.

  7. Laparoscopic-assisted Ventral Hernia Repair: Primary Fascial Repair with Polyester Mesh versus Polyester Mesh Alone.

    PubMed

    Karipineni, Farah; Joshi, Priya; Parsikia, Afshin; Dhir, Teena; Joshi, Amit R T

    2016-03-01

    Laparoscopic-assisted ventral hernia repair (LAVHR) with mesh is well established as the preferred technique for hernia repair. We sought to determine whether primary fascial closure and/or overlap of the mesh reduced recurrence and/or complications. We conducted a retrospective review on 57 LAVHR patients using polyester composite mesh between August 2010 and July 2013. They were divided into mesh-only (nonclosure) and primary fascial closure with mesh (closure) groups. Patient demographics, prior surgical history, mesh overlap, complications, and recurrence rates were compared. Thirty-nine (68%) of 57 patients were in the closure group and 18 (32%) in the nonclosure group. Mean defect sizes were 15.5 and 22.5 cm(2), respectively. Participants were followed for a mean of 1.3 years [standard deviation (SD) = 0.7]. Recurrence rates were 2/39 (5.1%) in the closure group and 1/18 (5.6%) in the nonclosure group (P = 0.947). There were no major postoperative complications in the nonclosure group. The closure group experienced four (10.3%) complications. This was not a statistically significant difference (P = 0.159). The median mesh-to-hernia ratio for all repairs was 15.2 (surface area) and 3.9 (diameter). Median length of stay was 14.5 hours (1.7-99.3) for patients with nonclosure and 11.9 hours (6.9-90.3 hours) for patients with closure (P = 0.625). In conclusion, this is one of the largest series of LAVHR exclusively using polyester dual-sided mesh. Our recurrence rate was about 5 per cent. Significant mesh overlap is needed to achieve such low recurrence rates. Primary closure of hernias seems less important than adequate mesh overlap in preventing recurrence after LAVHR.

  8. Parallelized 3D CSEM modeling using edge-based finite element with total field formulation and unstructured mesh

    NASA Astrophysics Data System (ADS)

    Cai, Hongzhu; Hu, Xiangyun; Li, Jianhui; Endo, Masashi; Xiong, Bin

    2017-02-01

    We solve the 3D controlled-source electromagnetic (CSEM) problem using the edge-based finite element method. The modeling domain is discretized using unstructured tetrahedral mesh. We adopt the total field formulation for the quasi-static variant of Maxwell's equation and the computation cost to calculate the primary field can be saved. We adopt a new boundary condition which approximate the total field on the boundary by the primary field corresponding to the layered earth approximation of the complicated conductivity model. The primary field on the modeling boundary is calculated using fast Hankel transform. By using this new type of boundary condition, the computation cost can be reduced significantly and the modeling accuracy can be improved. We consider that the conductivity can be anisotropic. We solve the finite element system of equations using a parallelized multifrontal solver which works efficiently for multiple source and large scale electromagnetic modeling.

  9. Geometrical and algebraic approach to central molecular chirality: a chirality index and an Aufbau description of tetrahedral molecules.

    PubMed

    Capozziello, Salvatore; Lattanzi, Alessandra

    2006-08-01

    On the basis of empirical Fischer projections, we develop an algebraic approach to the central molecular chirality of tetrahedral molecules. The elements of such an algebra are obtained from the 24 projections which a single chiral tetrahedron can generate in S and R absolute configurations. They constitute a matrix representation of the O4 orthogonal group. According to this representation, given a molecule with n chiral centres, it is possible to define an "index of chirality chi identical with {n, p}", where n is the number of stereogenic centres of the molecule and p the number of permutations observed under rotations and superimpositions of the tetrahedral molecule to its mirror image. The chirality index not only assigns the global chirality of a given tetrahedral chain, but indicates also a way to predict the same property for new compounds, which can be built up consistently.

  10. Mesh Surgery for Anterior Vaginal Wall Prolapse: A Meta-analysis.

    PubMed

    Juliato, Cássia Raquel Teatin; Santos Júnior, Luiz Carlos do; Haddad, Jorge Milhem; Castro, Rodrigo Aquino; Lima, Marcelo; Castro, Edilson Benedito de

    2016-07-01

    Purpose Pelvic organ prolapse (POP) is a major health issue worldwide, affecting 6-8% of women. The most affected site is the anterior vaginal wall. Multiple procedures and surgical techniques have been used, with or without the use of vaginal meshes, due to common treatment failure, reoperations, and complication rates in some studies. Methods Systematic review of the literature and meta-analysis regarding the use of vaginal mesh in anterior vaginal wall prolapse was performed. A total of 115 papers were retrieved after using the medical subject headings (MESH) terms: 'anterior pelvic organ prolapse OR cystocele AND surgery AND (mesh or colporrhaphy)' in the PubMed database. Exclusion criteria were: follow-up shorter than 1 year, use of biological or absorbable meshes, and inclusion of other vaginal wall prolapses. Studies were put in a data chart by two independent editors; results found in at least two studies were grouped for analysis. Results After the review of the titles by two independent editors, 70 studies were discarded, and after abstract assessment, 18 trials were eligible for full text screening. For final screening and meta-analysis, after applying the Jadad score (> 2), 12 studies were included. Objective cure was greater in the mesh surgery group (odds ratio [OR] = 1,28 [1,07-1,53]), which also had greater blood loss (mean deviation [MD] = 45,98 [9,72-82,25]), longer surgery time (MD = 15,08 [0,48-29,67]), but less prolapse recurrence (OR = 0,22 [01,3-0,38]). Dyspareunia, symptom resolution and reoperation rates were not statistically different between groups. Quality of life (QOL) assessment through the pelvic organ prolapse/urinary incontinence sexual questionnaire (PISQ-12), the pelvic floor distress inventory (PFDI-20), the pelvic floor impact questionnaire (PFIQ-7), and the perceived quality of life scale (PQOL) was not significantly different. Conclusions Anterior vaginal prolapse mesh surgery has greater anatomic

  11. A Space-Time Conservation Element and Solution Element Method for Solving the Two- and Three-Dimensional Unsteady Euler Equations Using Quadrilateral and Hexahedral Meshes

    NASA Technical Reports Server (NTRS)

    Zhang, Zeng-Chan; Yu, S. T. John; Chang, Sin-Chung; Jorgenson, Philip (Technical Monitor)

    2001-01-01

    In this paper, we report a version of the Space-Time Conservation Element and Solution Element (CE/SE) Method in which the 2D and 3D unsteady Euler equations are simulated using structured or unstructured quadrilateral and hexahedral meshes, respectively. In the present method, mesh values of flow variables and their spatial derivatives are treated as independent unknowns to be solved for. At each mesh point, the value of a flow variable is obtained by imposing a flux conservation condition. On the other hand, the spatial derivatives are evaluated using a finite-difference/weighted-average procedure. Note that the present extension retains many key advantages of the original CE/SE method which uses triangular and tetrahedral meshes, respectively, for its 2D and 3D applications. These advantages include efficient parallel computing ease of implementing non-reflecting boundary conditions, high-fidelity resolution of shocks and waves, and a genuinely multidimensional formulation without using a dimensional-splitting approach. In particular, because Riemann solvers, the cornerstones of the Godunov-type upwind schemes, are not needed to capture shocks, the computational logic of the present method is considerably simpler. To demonstrate the capability of the present method, numerical results are presented for several benchmark problems including oblique shock reflection, supersonic flow over a wedge, and a 3D detonation flow.

  12. Mesh saliency with adaptive local patches

    NASA Astrophysics Data System (ADS)

    Nouri, Anass; Charrier, Christophe; Lézoray, Olivier

    2015-03-01

    3D object shapes (represented by meshes) include both areas that attract the visual attention of human observers and others less or not attractive at all. This visual attention depends on the degree of saliency exposed by these areas. In this paper, we propose a technique for detecting salient regions in meshes. To do so, we define a local surface descriptor based on local patches of adaptive size and filled with a local height field. The saliency of mesh vertices is then defined as its degree measure with edges weights computed from adaptive patch similarities. Our approach is compared to the state-of-the-art and presents competitive results. A study evaluating the influence of the parameters establishing this approach is also carried out. The strength and the stability of our approach with respect to noise and simplification are also studied.

  13. GRChombo: Numerical relativity with adaptive mesh refinement

    NASA Astrophysics Data System (ADS)

    Clough, Katy; Figueras, Pau; Finkel, Hal; Kunesch, Markus; Lim, Eugene A.; Tunyasuvunakool, Saran

    2015-12-01

    In this work, we introduce {\\mathtt{GRChombo}}: a new numerical relativity code which incorporates full adaptive mesh refinement (AMR) using block structured Berger-Rigoutsos grid generation. The code supports non-trivial ‘many-boxes-in-many-boxes’ mesh hierarchies and massive parallelism through the message passing interface. {\\mathtt{GRChombo}} evolves the Einstein equation using the standard BSSN formalism, with an option to turn on CCZ4 constraint damping if required. The AMR capability permits the study of a range of new physics which has previously been computationally infeasible in a full 3 + 1 setting, while also significantly simplifying the process of setting up the mesh for these problems. We show that {\\mathtt{GRChombo}} can stably and accurately evolve standard spacetimes such as binary black hole mergers and scalar collapses into black holes, demonstrate the performance characteristics of our code, and discuss various physics problems which stand to benefit from the AMR technique.

  14. Molecular orbital (MSXα) calculations of s-electron densities of tetrahedrally coordinated ferric iron: Comparison with experimental isomer shifts

    NASA Astrophysics Data System (ADS)

    Tang Kai, A.; Annersten, H.; Ericsson, T.

    1980-04-01

    The MSXα method has been used to calculate the s-electron densities at the nucleus for tetrahedrally coordinated ferric iron, (FeO4)5-, comparing the observed increase in isomer shift values with increasing Fe-O separation. The results give an isomer shift calibration constant of -0.3 (a.u. mm×s-1) assuming a constant ratio for the iron and oxygen sphere radii for the different polyhedra sizes. It is suggested that increasing bonding distances in tetrahedral coordination polyhedra are the dominant factors determining the value of the isomer shifts in Fe-Mg-silicates.

  15. Titanium Mesh Nasal Repair without Nasal Lining.

    PubMed

    Zenga, Joseph; Kao, Katherine; Chen, Collin; Gross, Jennifer; Hahn, Samuel; Chi, John J; Branham, Gregory H

    2017-02-01

    The objective of this study was to describe outcomes for patients who underwent titanium mesh reconstruction of full-thickness nasal defects without internal lining repair. This is a retrospective cohort study. Patients with through-and-through nasal defects were identified at a single academic institution between 2008 and 2016. Nasal reconstruction was performed with either titanium mesh and external skin reconstruction without repair of the intranasal lining or traditional three-layer closure. Five patients underwent titanium mesh reconstruction and 11 underwent traditional three-layer repair. Median follow-up was 11 months (range, 2-66 months). The only significant difference between groups was older age in patients undergoing titanium reconstruction (mean, 81 vs. 63 years; difference of 18; 95% confidence interval [CI], 4-32 years). Defect extent including overall size and structures removed was similar between groups (p > 0.05). Paramedian forehead flap was the most common external reconstruction in both groups (100% for titanium mesh and 73% for three-layer closure). Time under anesthesia was significantly shorter for titanium mesh reconstruction (median, 119 vs. 314 minutes; difference of 195; 95% CI, 45-237). Estimated blood loss and length of hospital stay were similar between groups (p > 0.05). Complication rates were substantial although not significantly different, 40 and 36% in titanium and three-layer reconstruction, respectively (p > 0.05). All patients with complications after titanium reconstruction had prior or postoperative radiotherapy. Titanium mesh reconstruction of through-and-through nasal defects can successfully be performed without reconstruction of the intranasal lining, significantly decreasing operative times. This reconstructive technique may not be suitable for patients who undergo radiotherapy.

  16. Development of modular cable mesh deployable antenna

    NASA Astrophysics Data System (ADS)

    Meguro, Akira; Mitsugi, Jin; Andou, Kazuhide

    1993-03-01

    This report describes a concept and key technologies for the modular mesh deployable antenna. The antenna reflector composed of independently manufactured and tested modules is presented. Each module consists of a mesh surface, a cable network, and a deployable truss structure. The cable network comprises three kinds of cables, surface, tie, and back cables. Adjustment of tie cable lengths improves the surface accuracy. Synchronous deployment truss structures are considered as a supporting structure. Their design method, BBM's (Bread Board Model) and deployment analysis are also explained.

  17. Unstructured Adaptive Meshes: Bad for Your Memory?

    NASA Technical Reports Server (NTRS)

    Biswas, Rupak; Feng, Hui-Yu; VanderWijngaart, Rob

    2003-01-01

    This viewgraph presentation explores the need for a NASA Advanced Supercomputing (NAS) parallel benchmark for problems with irregular dynamical memory access. This benchmark is important and necessary because: 1) Problems with localized error source benefit from adaptive nonuniform meshes; 2) Certain machines perform poorly on such problems; 3) Parallel implementation may provide further performance improvement but is difficult. Some examples of problems which use irregular dynamical memory access include: 1) Heat transfer problem; 2) Heat source term; 3) Spectral element method; 4) Base functions; 5) Elemental discrete equations; 6) Global discrete equations. Nonconforming Mesh and Mortar Element Method are covered in greater detail in this presentation.

  18. Shuffle-exchanges on augmented meshes

    NASA Technical Reports Server (NTRS)

    Bokhari, S. H.

    1984-01-01

    A mesh connected array of size N = two to the Kth power, K an integer, can be augmented by adding at most one edge per node such that it can perform a shuffle-exchange of size N/2 in constant time. A shuffle-exchange of size N is performed on this augmented array in constant time. This is done by combining the available perfect shuffle of size N/2 with the existing nearest neighbor connections of the mesh. By carefully scheduling the different permutations that are composed in order to achieve the shuffle, the time required is reduced to 5 steps, which is optimal for this network.

  19. Multigrid solution strategies for adaptive meshing problems

    NASA Technical Reports Server (NTRS)

    Mavriplis, Dimitri J.

    1995-01-01

    This paper discusses the issues which arise when combining multigrid strategies with adaptive meshing techniques for solving steady-state problems on unstructured meshes. A basic strategy is described, and demonstrated by solving several inviscid and viscous flow cases. Potential inefficiencies in this basic strategy are exposed, and various alternate approaches are discussed, some of which are demonstrated with an example. Although each particular approach exhibits certain advantages, all methods have particular drawbacks, and the formulation of a completely optimal strategy is considered to be an open problem.

  20. Three-dimensional modeling of capsule implosions in OMEGA tetrahedral hohlraums

    SciTech Connect

    Schnittman, J. D.; Craxton, R. S.

    2000-07-01

    Tetrahedral hohlraums have been proposed as a means for achieving the highly uniform implosions needed for ignition with inertial confinement fusion (ICF) [J. D. Schnittman and R. S. Craxton, Phys. Plasmas 3, 3786 (1996)]. Recent experiments on the OMEGA laser system have achieved good drive uniformity consistent with theoretical predictions [J. M. Wallace et al., Phys. Rev. Lett. 82, 3807 (1999)]. To better understand these experiments and future investigations of high-convergence ICF implosions, the three-dimensional (3-D) view-factor code BUTTERCUP has been expanded to model the time-dependent radiation transport in the hohlraum and the hydrodynamic implosion of the capsule. Additionally, a 3-D postprocessor has been written to simulate x-ray images of the imploded core. Despite BUTTERCUP's relative simplicity, its predictions for radiation drive temperatures, fusion yields, and core deformation show close agreement with experiment. (c) 2000 American Institute of Physics.

  1. Three-dimensional modeling of capsule implosions in OMEGA tetrahedral hohlraums

    NASA Astrophysics Data System (ADS)

    Schnittman, J. D.; Craxton, R. S.

    2000-07-01

    Tetrahedral hohlraums have been proposed as a means for achieving the highly uniform implosions needed for ignition with inertial confinement fusion (ICF) [J. D. Schnittman and R. S. Craxton, Phys. Plasmas 3, 3786 (1996)]. Recent experiments on the OMEGA laser system have achieved good drive uniformity consistent with theoretical predictions [J. M. Wallace et al., Phys. Rev. Lett. 82, 3807 (1999)]. To better understand these experiments and future investigations of high-convergence ICF implosions, the three-dimensional (3-D) view-factor code BUTTERCUP has been expanded to model the time-dependent radiation transport in the hohlraum and the hydrodynamic implosion of the capsule. Additionally, a 3-D postprocessor has been written to simulate x-ray images of the imploded core. Despite BUTTERCUP's relative simplicity, its predictions for radiation drive temperatures, fusion yields, and core deformation show close agreement with experiment.

  2. Supported Tetrahedral Oxo-Sn Catalyst: Single Site, Two Modes of Catalysis

    SciTech Connect

    Beletskiy, Evgeny V.; Hou, Xianliang; Shen, Zhongliang; Gallagher, James R.; Miller, Jeffrey T.; Wu, Yuyang; Li, Tiehu; Kung, Mayfair C.; Kung, Harold H.

    2016-03-17

    Mild calcination in ozone of a (POSS)-Sn- (POSS) complex grafted on silica generated a heterogenized catalyst that mostly retained the tetrahedral coordination of its homogeneous precursor, as evidenced by spectroscopic characterizations using EXAFS, NMR, UV-vis, and DRIFT. The Sn centers are accessible and uniform and can be quantified by stoichiometric pyridine poisoning. This Sn-catalyst is active in hydride transfer reactions as a typical solid Lewis acid. However, the Sn centers can also create Brønsted acidity with alcohol by binding the alcohol strongly as alkoxide and transferring the hydroxyl H to the neighboring Sn-O-Si bond. The resulting acidic silanol is active in epoxide ring opening and acetalization reactions.

  3. Comparative morphology of configurations with reduced part count derived from the octahedral-tetrahedral truss

    NASA Technical Reports Server (NTRS)

    Lalvani, Haresh; Collins, Timothy J.

    1991-01-01

    Morphology (the study of structure and form) of the octahedral-tetrahedral (octet) truss is described. Both the geometry and symmetry of the octet truss are considered. Morphological techniques based on symmetry operations are presented which enable the derivation of reduced-part-count truss configurations from the octet truss by removing struts and nodes. These techniques are unique because their Morphological origination and they allow for the systematic generation and analysis of a large variety of structures. Methods for easily determining the part count and redundancy of infinite truss configurations are presented. Nine examples of truss configurations obtained by applying the derivation techniques are considered. These configurations are structurally stable while at the same time exhibiting significant reductions in part count. Some practical and analytical considerations, such as structural performance, regarding the example reduced-part-count truss geometries are briefly discussed.

  4. Self-assembly of a tetrahedral 58-nuclear barium vanadium oxide cluster.

    PubMed

    Kastner, Katharina; Puscher, Bianka; Streb, Carsten

    2013-01-07

    We report the synthesis and characterization of a molecular barium vanadium oxide cluster featuring high nuclearity and high symmetry. The tetrameric, 2.3 nm cluster H(5)[Ba(10)(NMP)(14)(H(2)O)(8)[V(12)O(33)](4)Br] is based on a bromide-centred, octahedral barium scaffold which is capped by four previously unknown [V(12)O(33)](6-) clusters in a tetrahedral fashion. The compound represents the largest polyoxovanadate-based heterometallic cluster known to date. The cluster is formed in organic solution and it is suggested that the bulky N-methyl-2-pyrrolidone (NMP) solvent ligands allow the isolation of this giant molecule and prevent further condensation to a solid-state metal oxide. The cluster is fully characterized using single-crystal XRD, elemental analysis, ESI mass spectrometry and other spectroscopic techniques.

  5. Structural stiffness, strength and dynamic characteristics of large tetrahedral space truss structures

    NASA Technical Reports Server (NTRS)

    Mikulas, M. M., Jr.; Bush, H. G.; Card, M. F.

    1977-01-01

    Physical characteristics of large skeletal frameworks for space applications are investigated by analyzing one concept: the tetrahedral truss, which is idealized as a sandwich plate with isotropic faces. Appropriate analytical relations are presented in terms of the truss column element properties which for calculations were taken as slender graphite/epoxy tubes. Column loads, resulting from gravity gradient control and orbital transfer, are found to be small for the class structure investigated. Fundamental frequencies of large truss structures are shown to be an order of magnitude lower than large earth based structures. Permissible loads are shown to result in small lateral deflections of the truss due to low-strain at Euler buckling of the slender graphite/epoxy truss column elements. Lateral thermal deflections are found to be a fraction of the truss depth using graphite/epoxy columns.

  6. First-principles study of anharmonic phonon effects in tetrahedral semiconductors via an external electric field

    NASA Astrophysics Data System (ADS)

    Dabiri, Zohreh; Kazempour, Ali; Sadeghzadeh, Mohammad Ali

    2016-11-01

    The strength of phonon anharmonicity is investigated in the framework of the Density Functional Perturbation Theory via an applied constant electric field. In contrast to routine approaches, we have employed the electric field as an effective probe to quest after the quasi-harmonic and anharmonic effects. Two typical tetrahedral semiconductors (diamond and silicon) have been selected to test the efficiency of this approach. In this scheme the applied field is responsible for establishing the perturbation and also inducing the anharmonicity in systems. The induced polarization is a result of changing the electronic density while ions are located at their ground state coordinates or at a specified strain. Employing this method, physical quantities of the semiconductors are calculated in presence of the electron-phonon interaction directly and, phonon-phonon interaction, indirectly. The present approach, which is in good agreement with previous theoretical and experimental studies, can be introduced as a benchmark to simply investigate the anharmonicity and pertinent consequences in materials.

  7. Epitaxially stabilized iridium spinel oxide without cations in the tetrahedral site

    NASA Astrophysics Data System (ADS)

    Kuriyama, Hiromichi; Matsuno, Jobu; Niitaka, Seiji; Uchida, Masaya; Hashizume, Daisuke; Nakao, Aiko; Sugimoto, Kunihisa; Ohsumi, Hiroyuki; Takata, Masaki; Takagi, Hidenori

    2010-05-01

    Single-crystalline thin film of an iridium dioxide polymorph Ir2O4 has been fabricated by the pulsed laser deposition of LixIr2O4 precursor and the subsequent Li-deintercalation using soft chemistry. Ir2O4 crystallizes in a spinel (AB2O4) without A cations in the tetrahedral site, which is isostructural to λ-MnO2. Ir ions form a pyrochlore sublattice, which is known to give rise to a strong geometrical frustration. This Ir spinel was found to be a narrow gap insulator, in remarkable contrast to the metallic ground state of rutile-type IrO2. We argue that an interplay of a strong spin-orbit coupling and a Coulomb repulsion gives rise to an insulating ground state as in a layered perovskite Sr2IrO4.

  8. Gas-phase acidities of tetrahedral oxyacids from ab initio electronic structure theory

    SciTech Connect

    Rustad, J.R.; Dixon, D.A.; Kubicki, J.D.; Felmy, A.R.

    2000-05-04

    Density functional calculations have been performed on several protonation states of the oxyacids of Si, P, V, As, Cr, and S. Structures and vibrational frequencies are in good agreement with experimental values where these are available. A reasonably well-defined correlation between the calculated gas-phase acidities and the measured pK{sub a} in aqueous solution has been found. The pK{sub a}/gas-phase acidity slopes are consistent with those derived from previous molecular mechanics calculations on ferric hydrolysis and the first two acidity constants for orthosilicic acid. The successive deprotonation of other H{sub n}TO{sub 4} species, for a given tetrahedral anion T are roughly consistent with this slope, but not to the extent that there is a universal correlation among all species.

  9. Rarefield gas flows through meshes and implications for atmospheric measurements

    NASA Astrophysics Data System (ADS)

    Gumbel, J.

    2001-05-01

    Meshes are commonly used as part of instruments for in situ atmospheric measurements. This study analyses the aerodynamic effect of meshes by means of wind tunnel experiments and numerical simulations. Based on the Direct Simulation Monte Carlo method, a simple mesh parameterisation is described and applied to a number of representative flow conditions. For open meshes freely exposed to the flow, substantial compression effects are found both upstream and downstream of the mesh. Meshes attached to close instrument structures, on the other hand, cause only minor flow disturbances. In an accompanying paper, the approach developed here is applied to the quantitative analysis of rocket-borne density measurements in the middle atmosphere.

  10. Quantifying tetrahedral adduct formation and stabilization in the cysteine and the serine proteases.

    PubMed

    Cleary, Jennifer A; Doherty, William; Evans, Paul; Malthouse, J Paul G

    2015-10-01

    Two new papain inhibitors have been synthesized where the terminal α-carboxyl groups of Z-Phe-Ala-COOH and Ac-Phe-Gly-COOH have been replaced by a proton to give Z-Phe-Ala-H and Ac-Phe-Gly-H. We show that for papain, replacing the terminal carboxylate group of a peptide inhibitor with a hydrogen atom decreases binding 3-4 fold while replacing an aldehyde or glyoxal group with a hydrogen atom decreases binding by 300,000-1,000,000 fold. Thiohemiacetal formation by papain with aldehyde or glyoxal inhibitors is shown to be ~10,000 times more effective than hemiacetal or hemiketal formation with chymotrypsin. It is shown using effective molarities, that for papain, thiohemiacetal stabilization is more effective with aldehyde inhibitors than with glyoxal inhibitors. The effective molarity obtained when papain is inhibited by an aldehyde inhibitor is similar to the effective molarity obtained when chymotrypsin is inhibited by glyoxal inhibitors showing that both enzymes can stabilize tetrahedral adducts by similar amounts. Therefore the greater potency of aldehyde and glyoxal inhibitors with papain is not due to greater thiohemiacetal stabilization by papain compared to the hemiketal and hemiacetal stabilization by chymotrypsin, instead it reflects the greater intrinsic reactivity of the catalytic thiol group of papain compared to the catalytic hydroxyl group of chymotrypsin. It is argued that while the hemiacetals and thiohemiacetals formed with the serine and cysteine proteases respectively can mimic the catalytic tetrahedral intermediate they are also analogues of the productive and non-productive acyl intermediates that can be formed with the cysteine and serine proteases.

  11. MeshEZW: an image coder using mesh and finite elements

    NASA Astrophysics Data System (ADS)

    Landais, Thomas; Bonnaud, Laurent; Chassery, Jean-Marc

    2003-08-01

    In this paper, we present a new method to compress the information in an image, called MeshEZW. The proposed approach is based on the finite elements method, a mesh construction and a zerotree method. The zerotree method is an adaptive of the EZW algorithm with two new symbols for increasing the performance. These steps allow a progressive representation of the image by the automatic construction of a bitstream. The mesh structure is adapted to the image compression domain and is defined to allow video comrpession. The coder is described and some preliminary results are discussed.

  12. Shear Alignment of Diblock Copolymers for Patterning Nanowire Meshes

    SciTech Connect

    Gustafson, Kyle T.

    2016-09-08

    Metallic nanowire meshes are useful as cheap, flexible alternatives to indium tin oxide – an expensive, brittle material used in transparent conductive electrodes. We have fabricated nanowire meshes over areas up to 2.5 cm2 by: 1) mechanically aligning parallel rows of diblock copolymer (diBCP) microdomains; 2) selectively infiltrating those domains with metallic ions; 3) etching away the diBCP template; 4) sintering to reduce ions to metal nanowires; and, 5) repeating steps 1 – 4 on the same sample at a 90° offset. We aligned parallel rows of polystyrene-b-poly(2-vinylpyridine) [PS(48.5 kDa)-b-P2VP(14.5 kDa)] microdomains by heating above its glass transition temperature (Tg ≈ 100°C), applying mechanical shear pressure (33 kPa) and normal force (13.7 N), and cooling below Tg. DiBCP samples were submerged in aqueous solutions of metallic ions (15 – 40 mM ions; 0.1 – 0.5 M HCl) for 30 – 90 minutes, which coordinate to nitrogen in P2VP. Subsequent ozone-etching and sintering steps yielded parallel nanowires. We aimed to optimize alignment parameters (e.g. shear and normal pressures, alignment duration, and PDMS thickness) to improve the quality, reproducibility, and scalability of meshes. We also investigated metals other than Pt and Au that may be patterned using this technique (Cu, Ag).

  13. Highly Symmetric and Congruently Tiled Meshes for Shells and Domes

    PubMed Central

    Rasheed, Muhibur; Bajaj, Chandrajit

    2016-01-01

    We describe the generation of all possible shell and dome shapes that can be uniquely meshed (tiled) using a single type of mesh face (tile), and following a single meshing (tiling) rule that governs the mesh (tile) arrangement with maximal vertex, edge and face symmetries. Such tiling arrangements or congruently tiled meshed shapes, are frequently found in chemical forms (fullerenes or Bucky balls, crystals, quasi-crystals, virus nano shells or capsids), and synthetic shapes (cages, sports domes, modern architectural facades). Congruently tiled meshes are both aesthetic and complete, as they support maximal mesh symmetries with minimal complexity and possess simple generation rules. Here, we generate congruent tilings and meshed shape layouts that satisfy these optimality conditions. Further, the congruent meshes are uniquely mappable to an almost regular 3D polyhedron (or its dual polyhedron) and which exhibits face-transitive (and edge-transitive) congruency with at most two types of vertices (each type transitive to the other). The family of all such congruently meshed polyhedra create a new class of meshed shapes, beyond the well-studied regular, semi-regular and quasi-regular classes, and their duals (platonic, Catalan and Johnson). While our new mesh class is infinite, we prove that there exists a unique mesh parametrization, where each member of the class can be represented by two integer lattice variables, and moreover efficiently constructable. PMID:27563368

  14. Particle Collection Efficiency for Nylon Mesh Screens

    PubMed Central

    Cena, Lorenzo G.; Ku, Bon-Ki; Peters, Thomas M.

    2015-01-01

    Mesh screens composed of nylon fibers leave minimal residual ash and produce no significant spectral interference when ashed for spectrometric examination. These characteristics make nylon mesh screens attractive as a collection substrate for nanoparticles. A theoretical single-fiber efficiency expression developed for wire-mesh screens was evaluated for estimating the collection efficiency of submicrometer particles for nylon mesh screens. Pressure drop across the screens, the effect of particle morphology (spherical and highly fractal) on collection efficiency and single-fiber efficiency were evaluated experimentally for three pore sizes (60, 100 and 180 μm) at three flow rates (2.5, 4 and 6 Lpm). The pressure drop across the screens was found to increase linearly with superficial velocity. The collection efficiency of the screens was found to vary by less than 4% regardless of particle morphology. Single-fiber efficiency calculated from experimental data was in good agreement with that estimated from theory for particles between 40 and 150 nm but deviated from theory for particles outside this size range. New coefficients for the single-fiber efficiency model were identified that minimized the sum of square error (SSE) between the values estimated with the model and those determined experimentally. Compared to the original theory, the SSE calculated using the modified theory was at least one order of magnitude lower for all screens and flow rates with the exception of the 60-μm pore screens at 2.5 Lpm, where the decrease was threefold. PMID:26692631

  15. Stainless steel mesh-acrylic cranioplasty.

    PubMed

    Tysvaer, A T; Hovind, K H

    1977-03-01

    Twenty-four steel mesh-acrylic plates have been used for repair of skull defects in 1970-73. Three plates had to be removed due to complications, two due to infection and one due to an allergic reaction. The plate is easy to mould, strong, and light. The cosmetic results are excellent.

  16. Functionalized Nanofiber Meshes Enhance Immunosorbent Assays.

    PubMed

    Hersey, Joseph S; Meller, Amit; Grinstaff, Mark W

    2015-12-01

    Three-dimensional substrates with high surface-to-volume ratios and subsequently large protein binding capacities are of interest for advanced immunosorbent assays utilizing integrated microfluidics and nanosensing elements. A library of bioactive and antifouling electrospun nanofiber substrates, which are composed of high-molecular-weight poly(oxanorbornene) derivatives, is described. Specifically, a set of copolymers are synthesized from three 7-oxanorbornene monomers to create a set of water insoluble copolymers with both biotin (bioactive) and triethylene glycol (TEG) (antifouling) functionality. Porous three-dimensional nanofiber meshes are electrospun from these copolymers with the ability to specifically bind streptavidin while minimizing the nonspecific binding of other proteins. Fluorescently labeled streptavidin is used to quantify the streptavidin binding capacity of each mesh type through confocal microscopy. A simplified enzyme-linked immunosorbent assay (ELISA) is presented to assess the protein binding capabilities and detection limits of these nanofiber meshes under both static conditions (26 h) and flow conditions (1 h) for a model target protein (i.e., mouse IgG) using a horseradish peroxidase (HRP) colorimetric assay. Bioactive and antifouling nanofiber meshes outperform traditional streptavidin-coated polystyrene plates under flow, validating their use in future advanced immunosorbent assays and their compatibility with microfluidic-based biosensors.

  17. Hash functions and triangular mesh reconstruction*1

    NASA Astrophysics Data System (ADS)

    Hrádek, Jan; Kuchař, Martin; Skala, Václav

    2003-07-01

    Some applications use data formats (e.g. STL file format), where a set of triangles is used to represent the surface of a 3D object and it is necessary to reconstruct the triangular mesh with adjacency information. It is a lengthy process for large data sets as the time complexity of this process is O( N log N), where N is number of triangles. Triangular mesh reconstruction is a general problem and relevant algorithms can be used in GIS and DTM systems as well as in CAD/CAM systems. Many algorithms rely on space subdivision techniques while hash functions offer a more effective solution to the reconstruction problem. Hash data structures are widely used throughout the field of computer science. The hash table can be used to speed up the process of triangular mesh reconstruction but the speed strongly depends on hash function properties. Nevertheless the design or selection of the hash function for data sets with unknown properties is a serious problem. This paper describes a new hash function, presents the properties obtained for large data sets, and discusses validity of the reconstructed surface. Experimental results proved theoretical considerations and advantages of hash function use for mesh reconstruction.

  18. Constrained and joint inversion on unstructured meshes

    NASA Astrophysics Data System (ADS)

    Doetsch, J.; Jordi, C.; Rieckh, V.; Guenther, T.; Schmelzbach, C.

    2015-12-01

    Unstructured meshes allow for inclusion of arbitrary surface topography, complex acquisition geometry and undulating geological interfaces in the inversion of geophysical data. This flexibility opens new opportunities for coupling different geophysical and hydrological data sets in constrained and joint inversions. For example, incorporating geological interfaces that have been derived from high-resolution geophysical data (e.g., ground penetrating radar) can add geological constraints to inversions of electrical resistivity data. These constraints can be critical for a hydrogeological interpretation of the inversion results. For time-lapse inversions of geophysical data, constraints can be derived from hydrological point measurements in boreholes, but it is difficult to include these hard constraints in the inversion of electrical resistivity monitoring data. Especially mesh density and the regularization footprint around the hydrological point measurements are important for an improved inversion compared to the unconstrained case. With the help of synthetic and field examples, we analyze how regularization and coupling operators should be chosen for time-lapse inversions constrained by point measurements and for joint inversions of geophysical data in order to take full advantage of the flexibility of unstructured meshes. For the case of constraining to point measurements, it is important to choose a regularization operator that extends beyond the neighboring cells and the uncertainty in the point measurements needs to be accounted for. For joint inversion, the choice of the regularization depends on the expected subsurface heterogeneity and the cell size of the parameter mesh.

  19. The Factory Approach to Creating TSTT Meshes

    SciTech Connect

    Epperly, T

    2003-10-21

    The factory approach (a.k.a. virtual constructor) hides the details of the class implementing the TSTT from TSTT users. In version 0.5 of TSTT.sidl, the client hard codes the name of the implementing class into their code. The client is forced to choose from the small set of possible concrete classes defined in TSTT.sidl. This approach makes it impossible to support multiple implementations of the TSTT in a single process because each implementation has to implement the same class. The factory approach hides the details of mesh creation from the client. The client does not need to know the name of the implementing class, and the client can dynamically determine which interfaces are supported by the new mesh. A factory can support multiple TSTT implementation because each implementation defines its own concrete classes to implement. The factory approach does require the TSTT compliant mesh packages to implement a MeshFactory interface, and everyone needs to link against an implementation of the Registry. The Registry only has 7 methods that are fairly easy to implement, and everyone can share one implementation of the Registry.

  20. A novel wire mesh "cell" for studying lipid oxidative processes by fourier transform infrared spectroscopy.

    PubMed

    García-González, Diego L; van de Voort, Frederik R

    2009-05-01

    A novel infrared (IR) sample handling accessory has been developed to monitor and study oxidation processes of edible oils under moderate temperature conditions by Fourier transform infrared (FT-IR) spectroscopy. A reusable stainless steel mesh IR "cell" was designed and evaluated from the standpoint of mesh size, transmission characteristics, its ability to entrap oil, and techniques to apply sample and normalize path length so as to obtain good quality, reproducible spectra. The concept is to entrap oil within the mesh by means of its inherent surface tension and to take advantage of the high surface area provided by the mesh to facilitate rapid oxidation of the oil by air at ambient or slightly elevated temperatures without having to resort to more extreme temperature conditions to track oxidative changes in real time. Changes taking place in canola oil at room temperature, in the dark and exposed to light, as well as at 50 degrees C are presented to illustrate the performance of the cell in monitoring oxidative changes in real time (e.g., formation of hydroperoxides, loss of cis and formation of trans double bonds). The mesh cell should be useful for comparing the relative performance of antioxidants as well as evaluating the oxidative stability of oils, among other applications.

  1. Electronic Transitions as a Probe of Tetrahedral versus Octahedral Coordination in Nickel(II) Complexes: An Undergraduate Inorganic Chemistry Experiment.

    ERIC Educational Resources Information Center

    Filgueiras, Carlos A. L.; Carazza, Fernando

    1980-01-01

    Discusses procedures, theoretical considerations, and results of an experiment involving the preparation of a tetrahedral nickel(II) complex and its transformation into an octahedral species. Suggests that fundamental aspects of coordination chemistry can be demonstrated by simple experiments performed in introductory level courses. (Author/JN)

  2. The role of fcc tetrahedral subunits in the phase behavior of medium sized Lennard-Jones clusters.

    PubMed

    Saika-Voivod, Ivan; Poon, Louis; Bowles, Richard K

    2010-08-21

    The free energy of a 600-atom Lennard-Jones cluster is calculated as a function of surface and bulk crystallinity in order to study the structural transformations that occur in the core of medium sized clusters. Within the order parameter range studied, we find the existence of two free energy minima at temperatures near freezing. One minimum, at low values of both bulk and surface order, belongs to the liquid phase. The second minimum exhibits a highly ordered core with a disordered surface and is related to structures containing a single fcc-tetrahedral subunit, with an edge length of seven atoms (l=7), located in the particle core. At lower temperatures, a third minimum appears at intermediate values of the bulk order parameter which is shown to be related to the formation of multiple l=6 tetrahedra in the core of the cluster. We also use molecular dynamics simulations to follow a series of nucleation events and find that the clusters freeze to structures containing l=5, 6, 7, and 8 sized tetrahedra as well as those containing no tetrahedral units. The structural correlations between bulk and surface order with the size of the tetrahedral units in the cluster core are examined. Finally, the relationships between the formation of fcc tetrahedral subunits in the core, the phase behavior of medium sized clusters and the nucleation of noncrystalline global structures such as icosahedra and decahedra are discussed.

  3. Oxidation and degradation of polypropylene transvaginal mesh.

    PubMed

    Talley, Anne D; Rogers, Bridget R; Iakovlev, Vladimir; Dunn, Russell F; Guelcher, Scott A

    2017-04-01

    Polypropylene (PP) transvaginal mesh (TVM) repair for stress urinary incontinence (SUI) has shown promising short-term objective cure rates. However, life-altering complications have been associated with the placement of PP mesh for SUI repair. PP degradation as a result of the foreign body reaction (FBR) has been proposed as a contributing factor to mesh complications. We hypothesized that PP oxidizes under in vitro conditions simulating the FBR, resulting in degradation of the PP. Three PP mid-urethral slings from two commercial manufacturers were evaluated. Test specimens (n = 6) were incubated in oxidative medium for up to 5 weeks. Oxidation was assessed by Fourier Transform Infrared Spectroscopy (FTIR), and degradation was evaluated by scanning electron microscopy (SEM). FTIR spectra of the slings revealed evidence of carbonyl and hydroxyl peaks after 5 weeks of incubation time, providing evidence of oxidation of PP. SEM images at 5 weeks showed evidence of surface degradation, including pitting and flaking. Thus, oxidation and degradation of PP pelvic mesh were evidenced by chemical and physical changes under simulated in vivo conditions. To assess changes in PP surface chemistry in vivo, fibers were recovered from PP mesh explanted from a single patient without formalin fixation, untreated (n = 5) or scraped (n = 5) to remove tissue, and analyzed by X-ray photoelectron spectroscopy. Mechanical scraping removed adherent tissue, revealing an underlying layer of oxidized PP. These findings underscore the need for further research into the relative contribution of oxidative degradation to complications associated with PP-based TVM devices in larger cohorts of patients.

  4. Two-Year Outcomes After Vaginal Prolapse Reconstruction With Mesh Pelvic Floor Repair System

    PubMed Central

    Alperin, Marianna; Ellison, Rennique; Meyn, Leslie; Frankman, Elizabeth; Zyczynski, Halina M.

    2014-01-01

    Objective The aim of this study was to assess anatomical and functional outcomes 2 years after prolapse repair using vaginal mesh repair system. Methods Women enrolled in a 12-month observational study of outcomes after transvaginal mesh-augmented prolapse repair were invited to participate in an extended follow-up. Subjects completed questionnaires assessing pelvic symptoms, quality of life, global satisfaction, and a pelvic examination for anatomical support and mesh complications. Results Of 118 eligible women, 85 enrolled, 82 provided subjective data at 24 months, and pelvic examination/Pelvic Organ Prolapse Quantification data are available from 79 women. Total, anterior, and posterior Prolift kits were used in 47 (55%), 25 (29%), and 13 (15%), respectively. At baseline, most of the women had stage III prolapse (75%), with the anterior compartment constituting the leading edge in 71% of subjects. At 24 months, Pelvic Organ Prolapse Quantification measures were significantly improved from baseline in all compartments, with 51 (65%) stage 0/I, 25 (31%) stage II, 3 (4%) and stage III (P < 0.001), as were quality of life scores (P < 0.001), with the exception of sexual function. Symptomatic prolapse was reported by 7 (8.5%) women, of which 4 demonstrated prolapse in the nonoperated compartment. Three subjects (4%) reported persistent pelvic pain. The 2-year mesh exposure incidence was at least 13% (11/85). The proportion reporting dyspareunia was 28.9% (13/45) and was unchanged from baseline. The median global satisfaction was 9.3 (range 2.0–10.0). Conclusions Anatomical support, symptom relief, and satisfaction are high 24 months after mesh-augmented vaginal prolapse repair, although mesh exposure and new onset prolapse of the nonoperated compartment are not uncommon. PMID:23442503

  5. On Adaptive Mesh Generation in Two-Dimensions

    SciTech Connect

    D'Azevedo, E.

    1999-10-11

    This work considers the effectiveness of using anisotropic coordinate transformation in adaptive mesh generation. The anisotropic coordinate transformation is derived by interpreting the Hessian matrix of the data function as a metric tensor that measures the local approximation error. The Hessian matrix contains information about the local curvature of the surface and gives guidance in the aspect ratio and orientation for mesh generation. Since theoretically, an asymptotically optimally efficient mesh can be produced by transforming a regular mesh of optimal shape elements, it would be interesting to compare this approach with existing techniques in solution adaptive meshes. PLTMG , a general elliptic solver, is used to generate solution adapted triangular meshes for comparison. The solver has the capability of performing a posteriori error estimates in performing longest edge refinement, vertex unrefinement and mesh smoothing. Numerical experiments on three simple problems suggest the methodology employed in PLTMG is effective in generating near optimally efficient meshes.

  6. CUBIT mesh generation environment. Volume 1: Users manual

    SciTech Connect

    Blacker, T.D.; Bohnhoff, W.J.; Edwards, T.L.

    1994-05-01

    The CUBIT mesh generation environment is a two- and three-dimensional finite element mesh generation tool which is being developed to pursue the goal of robust and unattended mesh generation--effectively automating the generation of quadrilateral and hexahedral elements. It is a solid-modeler based preprocessor that meshes volume and surface solid models for finite element analysis. A combination of techniques including paving, mapping, sweeping, and various other algorithms being developed are available for discretizing the geometry into a finite element mesh. CUBIT also features boundary layer meshing specifically designed for fluid flow problems. Boundary conditions can be applied to the mesh through the geometry and appropriate files for analysis generated. CUBIT is specifically designed to reduce the time required to create all-quadrilateral and all-hexahedral meshes. This manual is designed to serve as a reference and guide to creating finite element models in the CUBIT environment.

  7. Cartesian-cell based grid generation and adaptive mesh refinement

    NASA Technical Reports Server (NTRS)

    Coirier, William J.; Powell, Kenneth G.

    1993-01-01

    Viewgraphs on Cartesian-cell based grid generation and adaptive mesh refinement are presented. Topics covered include: grid generation; cell cutting; data structures; flow solver formulation; adaptive mesh refinement; and viscous flow.

  8. Conjugation of gold nanoparticles to polypropylene mesh for enhanced biocompatibility.

    PubMed

    Grant, D N; Benson, J; Cozad, M J; Whelove, O E; Bachman, S L; Ramshaw, B J; Grant, D A; Grant, S A

    2011-12-01

    Polypropylene mesh materials have been utilized in hernia surgery for over 40 years. However, they are prone to degradation due to the body's aggressive foreign body reaction, which may cause pain or complications, forcing mesh removal from the patient. To mitigate these complications, gold nanomaterials were attached to polypropylene mesh in order to improve cellular response. Pristine samples of polypropylene mesh were exposed to hydrogen peroxide/cobalt chloride solutions to induce formation of surface carboxyl functional groups. Gold nanoparticles were covalently linked to the mesh. Scanning electron microscopy confirmed the presence of gold nanoparticles. Differential scanning calorimetry and mechanical testing confirmed that the polypropylene did not undergo any significantly detrimental changes in physicochemical properties. A WST-1 cell culture study showed an increase in cellularity on the gold nanoparticle-polypropylene mesh as compared to pristine mesh. This study showed that biocompatibility of polypropylene mesh may be improved via the conjugation of gold nanoparticles.

  9. Automatic Tooth Segmentation of Dental Mesh Based on Harmonic Fields.

    PubMed

    Liao, Sheng-hui; Liu, Shi-jian; Zou, Bei-ji; Ding, Xi; Liang, Ye; Huang, Jun-hui

    2015-01-01

    An important preprocess in computer-aided orthodontics is to segment teeth from the dental models accurately, which should involve manual interactions as few as possible. But fully automatic partition of all teeth is not a trivial task, since teeth occur in different shapes and their arrangements vary substantially from one individual to another. The difficulty is exacerbated when severe teeth malocclusion and crowding problems occur, which is a common occurrence in clinical cases. Most published methods in this area either are inaccurate or require lots of manual interactions. Motivated by the state-of-the-art general mesh segmentation methods that adopted the theory of harmonic field to detect partition boundaries, this paper proposes a novel, dental-targeted segmentation framework for dental meshes. With a specially designed weighting scheme and a strategy of a priori knowledge to guide the assignment of harmonic constraints, this method can identify teeth partition boundaries effectively. Extensive experiments and quantitative analysis demonstrate that the proposed method is able to partition high-quality teeth automatically with robustness and efficiency.

  10. On Reducing Delay in Mesh-Based P2P Streaming: A Mesh-Push Approach

    NASA Astrophysics Data System (ADS)

    Liu, Zheng; Xue, Kaiping; Hong, Peilin

    The peer-assisted streaming paradigm has been widely employed to distribute live video data on the internet recently. In general, the mesh-based pull approach is more robust and efficient than the tree-based push approach. However, pull protocol brings about longer streaming delay, which is caused by the handshaking process of advertising buffer map message, sending request message and scheduling of the data block. In this paper, we propose a new approach, mesh-push, to address this issue. Different from the traditional pull approach, mesh-push implements block scheduling algorithm at sender side, where the block transmission is initiated by the sender rather than by the receiver. We first formulate the optimal upload bandwidth utilization problem, then present the mesh-push approach, in which a token protocol is designed to avoid block redundancy; a min-cost flow model is employed to derive the optimal scheduling for the push peer; and a push peer selection algorithm is introduced to reduce control overhead. Finally, we evaluate mesh-push through simulation, the results of which show mesh-push outperforms the pull scheduling in streaming delay, and achieves comparable delivery ratio at the same time.

  11. Cubit Mesh Generation Toolkit V11.1

    SciTech Connect

    HANKS, BYRON; KERR, ROBERT; KNUPP, PATRICK; MAEZ, JONATHAN; WHITE, DAVID; MITCHELL, SCOTT; OWEN, STEVEN; SHEPHERD, JASON; TAUTGES, TIMOTHY; MELANDER, DARRYL; BLACKER, TEDDY; BORDEN, MICHAEL; BREWER, MICHAEL; CLARK, BRETT; FORTIER, LESLIE; KALLAHER, JENNA; PEBAY, PHILIPPE; STATEN, MATTHEW; VINEYARD, CRAIG; GROVER, BENJAMIN; BENZLEY, STEVEN; SIMPSON, CLINTON; NIELSON, ERIC; KOPP, JOEL; STORM, STEVE; NUGENT, MARK; WALTON, KIRK; BORDEN, MIKE; ERNST, CORY; FOWLER, JOHN; KRAFTCHECL, JASON; STEPHNSON, MIKE; YEOU, RAMMAGAY; MERKLEY, KARL; METERS, RAY; DEWET, MARK; RICHARDS, SARA; PENDLEY, KEVIN; MORRIS, RANDY; RICHARDSON, MARK; VYAS, VED; SHOWMAN, SAM; HAYS, ALEX; TIDWELL, BOYD; MILLAR, ALEX

    2009-03-25

    CUBIT prepares models to be used in computer-based simulation of real-world events. CUBIT is a full-featured software toolkit for robust generation of two- and three-dimensional finite element meshes (grids) and geometry preparation. Its main goal is to reduce the time to generate meshes, particularly large hex meshes of complicated, interlocking assemblies.

  12. A density driven mesh generator guided by a neural network

    SciTech Connect

    Lowther, D.A.; Dyck, D.N. )

    1993-03-01

    A neural network guided mesh generator is described. The mesh generator used density information provided by the neural network to determine the size and placement of elements. This system is coupled with an adaptive meshing and solving process and is shown to have major computational benefits compared with adaptation alone.

  13. 21 CFR 870.3650 - Pacemaker polymeric mesh bag.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Pacemaker polymeric mesh bag. 870.3650 Section 870...) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3650 Pacemaker polymeric mesh bag. (a) Identification. A pacemaker polymeric mesh bag is an implanted device used to hold...

  14. 21 CFR 870.3650 - Pacemaker polymeric mesh bag.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Pacemaker polymeric mesh bag. 870.3650 Section 870...) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3650 Pacemaker polymeric mesh bag. (a) Identification. A pacemaker polymeric mesh bag is an implanted device used to hold...

  15. 21 CFR 870.3650 - Pacemaker polymeric mesh bag.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Pacemaker polymeric mesh bag. 870.3650 Section 870...) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3650 Pacemaker polymeric mesh bag. (a) Identification. A pacemaker polymeric mesh bag is an implanted device used to hold...

  16. 21 CFR 870.3650 - Pacemaker polymeric mesh bag.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Pacemaker polymeric mesh bag. 870.3650 Section 870...) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3650 Pacemaker polymeric mesh bag. (a) Identification. A pacemaker polymeric mesh bag is an implanted device used to hold...

  17. 21 CFR 870.3650 - Pacemaker polymeric mesh bag.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Pacemaker polymeric mesh bag. 870.3650 Section 870...) MEDICAL DEVICES CARDIOVASCULAR DEVICES Cardiovascular Prosthetic Devices § 870.3650 Pacemaker polymeric mesh bag. (a) Identification. A pacemaker polymeric mesh bag is an implanted device used to hold...

  18. Culture of bovine embryos in polyester mesh sections: the effect of pore size and oxygen tension on in vitro development.

    PubMed

    Somfai, T; Inaba, Y; Aikawa, Y; Ohtake, M; Kobayashi, S; Akai, T; Hattori, H; Konishi, K; Imai, K

    2010-12-01

    The purpose of this study was to assess the feasibility of polyester mesh culture for the in vitro production of bovine embryos, as polyester mesh is an alternative way for tracking individual embryos throughout culture using time-lapse cinematography (TLC). Bovine embryos were isolated during in vitro culture using sections of three different polyethylene terephthalate (PET) mesh products. In vitro matured and fertilized bovine oocytes were cultured in the 217 × 217, 230 × 230 or 238 × 238-μm openings of PET mesh sections or in simple micro-drops (control) for 7 days under either 20% or 5% O(2) tensions. No difference in embryo developmental rates was found between the culture groups in terms of cleavage, blastocyst formation and blastocyst expansion irrespective of O(2) tension. In contrast, under 20% O(2) tension, blastocysts that developed in PET mesh with 217 × 217-μm opening had significantly higher numbers of total and trophectoderm (TE) cells than control embryos; however, the numbers and proportions of inner cell mass (ICM) cells did not differ. Under 5% O(2) tension, no difference was found among the culture groups in the numbers of total, ICM and TE cells in embryos. All three PET mesh products investigated in this study were proven to be effective to prevent embryo movement. The results demonstrate that bovine embryos can be cultured in PET mesh sections without negative side-effects and suggest that embryo distance determined by the mesh affects embryo quality at atmospheric oxygen tension. Polyethylene terephthalate mesh with 217 × 217-μm openings was found to be the most suitable for further application in TLC.

  19. Prosthetic Mesh Repair for Incarcerated Inguinal Hernia

    PubMed Central

    Tatar, Cihad; Tüzün, İshak Sefa; Karşıdağ, Tamer; Kızılkaya, Mehmet Celal; Yılmaz, Erdem

    2016-01-01

    Background: Incarcerated inguinal hernia is a commonly encountered urgent surgical condition, and tension-free repair is a well-established method for the treatment of non-complicated cases. However, due to the risk of prosthetic material-related infections, the use of mesh in the repair of strangulated or incarcerated hernia has often been subject to debate. Recent studies have demonstrated that biomaterials represent suitable materials for performing urgent hernia repair. Certain studies recommend mesh repair only for cases where no bowel resection is required; other studies, however, recommend mesh repair for patients requiring bowel resection as well. Aim: The aim of this study was to compare the outcomes of different surgical techniques performed for strangulated hernia, and to evaluate the effect of mesh use on postoperative complications. Study Design: Retrospective cross-sectional study. Methods: This retrospective study was performed with 151 patients who had been admitted to our hospital’s emergency department to undergo surgery for a diagnosis of incarcerated inguinal hernia. The patients were divided into two groups based on the applied surgical technique. Group 1 consisted of 112 patients treated with mesh-based repair techniques, while Group 2 consisted of 39 patients treated with tissue repair techniques. Patients in Group 1 were further divided into two sub-groups: one consisting of patients undergoing bowel resection (Group 3), and the other consisting of patients not undergoing bowel resection (Group 4). Results: In Group 1, it was observed that eight (7.14%) of the patients had wound infections, while two (1.78%) had hematomas, four (3.57%) had seromas, and one (0.89%) had relapse. In Group 2, one (2.56%) of the patients had a wound infection, while three (7.69%) had hematomas, one (2.56%) had seroma, and none had relapses. There were no statistically significant differences between the two groups with respect to wound infection, seroma

  20. Meshing complex macro-scale objects into self-assembling bricks

    PubMed Central

    Hacohen, Adar; Hanniel, Iddo; Nikulshin, Yasha; Wolfus, Shuki; Abu-Horowitz, Almogit; Bachelet, Ido

    2015-01-01

    Self-assembly provides an information-economical route to the fabrication of objects at virtually all scales. However, there is no known algorithm to program self-assembly in macro-scale, solid, complex 3D objects. Here such an algorithm is described, which is inspired by the molecular assembly of DNA, and based on bricks designed by tetrahedral meshing of arbitrary objects. Assembly rules are encoded by topographic cues imprinted on brick faces while attraction between bricks is provided by embedded magnets. The bricks can then be mixed in a container and agitated, leading to properly assembled objects at high yields and zero errors. The system and its assembly dynamics were characterized by video and audio analysis, enabling the precise time- and space-resolved characterization of its performance and accuracy. Improved designs inspired by our system could lead to successful implementation of self-assembly at the macro-scale, allowing rapid, on-demand fabrication of objects without the need for assembly lines. PMID:26226488

  1. Adaptive upscaling with the dual mesh method

    SciTech Connect

    Guerillot, D.; Verdiere, S.

    1997-08-01

    The objective of this paper is to demonstrate that upscaling should be calculated during the flow simulation instead of trying to enhance the a priori upscaling methods. Hence, counter-examples are given to motivate our approach, the so-called Dual Mesh Method. The main steps of this numerical algorithm are recalled. Applications illustrate the necessity to consider different average relative permeability values depending on the direction in space. Moreover, these values could be different for the same average saturation. This proves that an a priori upscaling cannot be the answer even in homogeneous cases because of the {open_quotes}dynamical heterogeneity{close_quotes} created by the saturation profile. Other examples show the efficiency of the Dual Mesh Method applied to heterogeneous medium and to an actual field case in South America.

  2. Structured mesh generation with smoothness controls

    NASA Astrophysics Data System (ADS)

    Zhang, Yaoxin; Jia, Yafei; Wang, Sam S. Y.

    2006-08-01

    In geometrically complex domains, the Ryskin and Leal (RL) orthogonal mesh generation system may cause mesh distortion and overlapping problems when using the weak constraint method with specified boundary point distribution for all boundaries. To resolve these problems, an improved RL system with automatic smoothness control is proposed. In this improved RL system, the automatic smoothness control mechanism is based on five types of smoothness conditions and includes the self-adjustment mechanism and the auto-evaluation mechanism for an empirical parameter. The proposed system is illustrated using several test examples. Several applications to natural domains are also demonstrated. It is shown that the improved RL system is capable of resolving the above problems at little cost of orthogonality.

  3. Isomorphic routing on a toroidal mesh

    NASA Technical Reports Server (NTRS)

    Mao, Weizhen; Nicol, David M.

    1993-01-01

    We study a routing problem that arises on SIMD parallel architectures whose communication network forms a toroidal mesh. We assume there exists a set of k message descriptors (xi, yi), where (xi, yi) indicates that the ith message's recipient is offset from its sender by xi hops in one mesh dimension, and yi hops in the other. Every processor has k messages to send, and all processors use the same set of message routing descriptors. The SIMD constraint implies that at any routing step, every processor is actively routing messages with the same descriptors as any other processor. We call this isomorphic routing. Our objective is to find the isomorphic routing schedule with least makespan. We consider a number of variations on the problem, yielding complexity results from O(k) to NP-complete. Most of our results follow after we transform the problem into a scheduling problem, where it is related to other well-known scheduling problems.

  4. Vertical-Axis Wind Turbine Mesh Generator

    SciTech Connect

    2014-01-24

    VAWTGen is a mesh generator for creating a finite element beam mesh of arbitrary vertical-axis wind turbines (VAWT). The software accepts input files specifying tower and blade structural and aerodynamic descriptions and constructs a VAWT using a minimal set of inputs. VAWTs with an arbitrary number of blades can be constructed with or without a central tower. Strut connections between the tower and blades can be specified in an arbitrary manner. The software also facilitates specifying arbitrary joints between structural components and concentrated structural tenns (mass and stiffness). The output files which describe the VAWT configuration are intended to be used with the Offshore Wind ENergy Simulation (OWENS) Toolkit software for structural dynamics analysis of VAWTs. Furthermore, VAWTGen is useful for visualizing output from the OWENS analysis software.

  5. 3-D Mesh Generation Nonlinear Systems

    SciTech Connect

    Christon, M. A.; Dovey, D.; Stillman, D. W.; Hallquist, J. O.; Rainsberger, R. B

    1994-04-07

    INGRID is a general-purpose, three-dimensional mesh generator developed for use with finite element, nonlinear, structural dynamics codes. INGRID generates the large and complex input data files for DYNA3D, NIKE3D, FACET, and TOPAZ3D. One of the greatest advantages of INGRID is that virtually any shape can be described without resorting to wedge elements, tetrahedrons, triangular elements or highly distorted quadrilateral or hexahedral elements. Other capabilities available are in the areas of geometry and graphics. Exact surface equations and surface intersections considerably improve the ability to deal with accurate models, and a hidden line graphics algorithm is included which is efficient on the most complicated meshes. The primary new capability is associated with the boundary conditions, loads, and material properties required by nonlinear mechanics programs. Commands have been designed for each case to minimize user effort. This is particularly important since special processing is almost always required for each load or boundary condition.

  6. 3D active shape models of human brain structures: application to patient-specific mesh generation

    NASA Astrophysics Data System (ADS)

    Ravikumar, Nishant; Castro-Mateos, Isaac; Pozo, Jose M.; Frangi, Alejandro F.; Taylor, Zeike A.

    2015-03-01

    The use of biomechanics-based numerical simulations has attracted growing interest in recent years for computer-aided diagnosis and treatment planning. With this in mind, a method for automatic mesh generation of brain structures of interest, using statistical models of shape (SSM) and appearance (SAM), for personalised computational modelling is presented. SSMs are constructed as point distribution models (PDMs) while SAMs are trained using intensity profiles sampled from a training set of T1-weighted magnetic resonance images. The brain structures of interest are, the cortical surface (cerebrum, cerebellum & brainstem), lateral ventricles and falx-cerebri membrane. Two methods for establishing correspondences across the training set of shapes are investigated and compared (based on SSM quality): the Coherent Point Drift (CPD) point-set registration method and B-spline mesh-to-mesh registration method. The MNI-305 (Montreal Neurological Institute) average brain atlas is used to generate the template mesh, which is deformed and registered to each training case, to establish correspondence over the training set of shapes. 18 healthy patients' T1-weightedMRimages form the training set used to generate the SSM and SAM. Both model-training and model-fitting are performed over multiple brain structures simultaneously. Compactness and generalisation errors of the BSpline-SSM and CPD-SSM are evaluated and used to quantitatively compare the SSMs. Leave-one-out cross validation is used to evaluate SSM quality in terms of these measures. The mesh-based SSM is found to generalise better and is more compact, relative to the CPD-based SSM. Quality of the best-fit model instance from the trained SSMs, to test cases are evaluated using the Hausdorff distance (HD) and mean absolute surface distance (MASD) metrics.

  7. Diffusive mesh relaxation in ALE finite element numerical simulations

    SciTech Connect

    Dube, E.I.

    1996-06-01

    The theory for a diffusive mesh relaxation algorithm is developed for use in three-dimensional Arbitary Lagrange/Eulerian (ALE) finite element simulation techniques. This mesh relaxer is derived by a variational principle for an unstructured 3D grid using finite elements, and incorporates hourglass controls in the numerical implementation. The diffusive coefficients are based on the geometric properties of the existing mesh, and are chosen so as to allow for a smooth grid that retains the general shape of the original mesh. The diffusive mesh relaxation algorithm is then applied to an ALE code system, and results from several test cases are discussed.

  8. BMP-2-loaded silica nanotube fibrous meshes for bone generation

    PubMed Central

    Chen, Song; Shi, Xuetao; Morita, Hiromi; Li, Jie; Ogawa, Nobuhiro; Ikoma, Toshiyuki; Hayakawa, Satoshi; Shirosaki, Yuki; Osaka, Akiyoshi; Hanagata, Nobutaka

    2011-01-01

    Silica nanotube fibrous meshes were fabricated as multiple functional matrices for both delivering bone morphological protein-2 (BMP-2) and supporting osteoblast attachment and proliferation. The meshes were fabricated via a collagen-templated sol–gel route and consisted of tubular silica with open ends. BMP-2 was loaded to the meshes by soaking in BMP-2 solution. The meshes effectively enabled the attachment and proliferation of osteoblast MC3T3-E1 cells and delivered bioactive BMP-2 to stimulate cell differentiation. These results demonstrate the potential use of the meshes in bone generation applications. PMID:27877463

  9. Wireless experiments on a Motorola mesh testbed.

    SciTech Connect

    Riblett, Loren E., Jr.; Wiseman, James M.; Witzke, Edward L.

    2010-06-01

    Motomesh is a Motorola product that performs mesh networking at both the client and access point levels and allows broadband mobile data connections with or between clients moving at vehicular speeds. Sandia National aboratories has extensive experience with this product and its predecessors in infrastructure-less mobile environments. This report documents experiments, which characterize certain aspects of how the Motomesh network performs when obile units are added to a fixed network infrastructure.

  10. Mesh Networking Optimized for Robotic Teleoperation

    DTIC Science & Technology

    2012-04-01

    system extends the range of and provides non-line-of-sight (NLOS) communications for tactical and explosive ordnance disposal ( EOD ) robots currently...networking system extends the range of and provides non-line-of-sight (NLOS) communications for tactical and explosive ordnance disposal ( EOD ) robots ...Mesh networking optimized for robotic teleoperation Abraham Hart, Narek Pezeshkian, Hoa Nguyen Unmanned Systems Branch, Code 71713 Space and Naval

  11. Optimal eigenvalue computation on a mesh multiprocessor

    SciTech Connect

    Crivelli, S.; Jessup, E. R.

    1993-01-01

    In this paper, we compare the costs of computing a single eigenvalue of a symmetric tridiagonal matrix by serial bisection and by parallel multisection on a mesh multiprocessor. We show how the optimal method for computing one eigenvalue depends on such variables as the matrix order and parameters of the multiprocessor used. We present the results of experiments on the 520-processor Intel Touchstone Delta to support our analysis.

  12. Particle Mesh Hydrodynamics for Astrophysics Simulations

    NASA Astrophysics Data System (ADS)

    Chatelain, Philippe; Cottet, Georges-Henri; Koumoutsakos, Petros

    We present a particle method for the simulation of three dimensional compressible hydrodynamics based on a hybrid Particle-Mesh discretization of the governing equations. The method is rooted on the regularization of particle locations as in remeshed Smoothed Particle Hydrodynamics (rSPH). The rSPH method was recently introduced to remedy problems associated with the distortion of computational elements in SPH, by periodically re-initializing the particle positions and by using high order interpolation kernels. In the PMH formulation, the particles solely handle the convective part of the compressible Euler equations. The particle quantities are then interpolated onto a mesh, where the pressure terms are computed. PMH, like SPH, is free of the convection CFL condition while at the same time it is more efficient as derivatives are computed on a mesh rather than particle-particle interactions. PMH does not detract from the adaptive character of SPH and allows for control of its accuracy. We present simulations of a benchmark astrophysics problem demonstrating the capabilities of this approach.

  13. Constant-mesh, multiple-shaft transmission

    SciTech Connect

    Rea, J.E.; Mills, D.D.; Sewell, J.S.

    1992-04-21

    This patent describes a multiple-shaft, constant-mesh transmission adapted to establish selectively a reverse torque delivery path and a forward drive torque delivery path and having a torque input means including a torque input shaft, a mainshaft aligned with the input shaft, a countershaft geared to the input shaft in spaced, parallel relationship with respect to the mainshaft, a torque output shaft joined to the mainshaft; multiple mainshaft gear elements journalled on the main airshaft, multiple cluster gear elements carried by the countershaft in meshing engagement with the mainshaft gear elements, one of the cluster gear elements being rotatably journalled on the countershaft; a reverse idle gear, a reverse gear journalled on the countershaft, the reverse idler gear being in constant mesh with the reverse gear and one of the mainshaft gear elements; first clutch means for connecting selectively the reverse gear and the countershaft; second synchronizer clutch means for connecting selectively the one of the mainshaft gear elements to the mainshaft; and third synchronizer clutch means for selectively connecting another of the mainshaft gear elements to the mainshaft; the first clutch means being a double-acting clutch with a first common axially movable clutch element adapted upon movement in one axial direction to drivably connected the reverse gear to the countershaft and adapted upon movement in the opposite axial direction to connect the one cluster gear element to the countershaft.

  14. Software for Automated Generation of Cartesian Meshes

    NASA Technical Reports Server (NTRS)

    Aftosmis, Michael J.; Melton, John E.; Berger, Marshal J.

    2006-01-01

    Cart3D is a collection of computer programs for generating Cartesian meshes [for computational fluid dynamics (CFD) and other applications] in volumes bounded by solid objects. Aspects of Cart3D at earlier stages of development were reported in "Robust and Efficient Generation of Cartesian Meshes for CFD" (ARC-14275), NASA Tech Briefs, Vol. 23, No. 8 (August 1999), page 30. The geometric input to Cart3D comprises surface triangulations like those commonly generated by computer-aided-design programs. Complexly shaped objects can be represented as assemblies of simpler ones. Cart3D deletes all portions of such an assembled object that are not on the exterior surface. Intersections between components are preserved in the resulting triangulation. A tie-breaking routine unambiguously resolves geometric degeneracies. Then taking the intersected surface triangulation as input, the volume mesh is generated through division of cells of an initially coarse hexahedral grid. Cells are subdivided to refine the grid in regions of increased surface curvature and/or increased flow gradients. Cells that become split into multiple unconnected regions by thin pieces of surface are identified.

  15. Retrieval study at 623 human mesh explants made of polypropylene--impact of mesh class and indication for mesh removal on tissue reaction.

    PubMed

    Klosterhalfen, B; Klinge, U

    2013-11-01

    Textile meshes frequently are implanted in the abdominal wall to reinforce a hernia repair. However, revisions for mesh associated complications confirm that these devices are not completely free of risk. Explanted devices offer an opportunity to define the impact of mesh structure on tissue response. This retrieval study analyses the tissue reaction to 623 polypropylene mesh samples (170 class 1 with large pores, and 453 class 2 with small pores) explanted for pain, infection, or recurrence. Histopathological assessment included morphometry of inflammatory infiltrate (IF) and connective tissue (CT), and of collagen 1/3 ratio. Half of the meshes were removed after more than 23 month. Despite large inter-individual differences removal for infection showed more IF than for pain or recurrence with significant correlation of IF with CT. Class 1 meshes with large pores showed less IF, CT, fistula formation, calcification, and bridging than class 2 meshes with small pores. Meshes removed for recurrence showed a lowered collagen 1/3 ratio in 70%. Large pore class 1 meshes showed an improved tissue response and may be considered as favorable to prevent inflammatory side effects. The presence of lowered collagen 1/3 ratio in most of the samples with recurrences stresses the relevance of an intact healing process. Late manifestation of complications demands long-lasting follow-up.

  16. Retrieval study at 623 human mesh explants made of polypropylene - impact of mesh class and indication for mesh removal on tissue reaction.

    PubMed

    Klosterhalfen, B; Klinge, U

    2013-05-19

    Textile meshes frequently are implanted in the abdominal wall to reinforce a hernia repair. However, revisions for mesh associated complications confirm that these devices are not completely free of risk. Explanted devices offer an opportunity to define the impact of mesh structure on tissue response. This retrieval study analyses the tissue reaction to 623 polypropylene mesh samples (170 class 1 with large pores, and 453 class 2 with small pores) explanted for pain, infection, or recurrence. Histopathological assessment included morphometry of inflammatory infiltrate (IF) and connective tissue (CT), and of collagen 1/3 ratio. Half of the meshes were removed after more than 23 month. Despite large inter-individual differences removal for infection showed more IF than for pain or recurrence with significant correlation of IF with CT. Class 1 meshes with large pores showed less IF, CT, fistula formation, calcification, and bridging than class 2 meshes with small pores. Meshes removed for recurrence showed a lowered collagen 1/3 ratio in 70%. Large pore class 1 meshes showed an improved tissue response and may be considered as favorable to prevent inflammatory side effects. The presence of lowered collagen 1/3 ratio in most of the samples with recurrences stresses the relevance of an intact healing process. Late manifestation of complications demands long-lasting follow-up. © 2013 Wiley Periodicals, Inc. J Biomed Mater Res Part B: Appl Biomater, 2013.

  17. Data-Parallel Mesh Connected Components Labeling and Analysis

    SciTech Connect

    Harrison, Cyrus; Childs, Hank; Gaither, Kelly

    2011-04-10

    We present a data-parallel algorithm for identifying and labeling the connected sub-meshes within a domain-decomposed 3D mesh. The identification task is challenging in a distributed-memory parallel setting because connectivity is transitive and the cells composing each sub-mesh may span many or all processors. Our algorithm employs a multi-stage application of the Union-find algorithm and a spatial partitioning scheme to efficiently merge information across processors and produce a global labeling of connected sub-meshes. Marking each vertex with its corresponding sub-mesh label allows us to isolate mesh features based on topology, enabling new analysis capabilities. We briefly discuss two specific applications of the algorithm and present results from a weak scaling study. We demonstrate the algorithm at concurrency levels up to 2197 cores and analyze meshes containing up to 68 billion cells.

  18. Tetrahedral oxyanions-assisted supramolecular assemblies of pyridine-based tectons into hydrogen-bonding networks

    NASA Astrophysics Data System (ADS)

    Ding, Xue-Hua; Wang, Shi; Li, Yong-Hua; Huang, Wei

    2015-01-01

    The systematic research has been done into structural variations of supramolecular architectures by the self assembly of two pyridine-based potential anion receptors, 1-(4-pyridyl)piperazine (L1) and 4-pyrrolidinopyridine (L2), and different inorganic acids (HCl, HBr, HI, HNO3, HClO4, HIO4, H2SO4 and H3PO4). The formation of four fascinating salts, i.e. (H2L12+)·(H2PO4-)2 (1), (H2L12+)·(ClO4-)2 (2), (HL2+)·(ClO4-) (3) and (HL2+)·(IO4-) (4), indicates that N-heterocyclic L1 and L2 are prone to cocrystallize with tetrahedral oxyanions and anionic topologies play a crucial role in the crystallization process. Structural analyses reveal that various intermolecular ring motifs have been generated by robust hydrogen-bonding interactions in compounds 1-4. In particular, interesting substructures were observed in H2PO4- from salts 1 due to its polytopic potential hydrogen-bonding donor and acceptor oxygen atoms, including ring motifs, 1D ribbons and 2D supramolecular framework. Much to our surprise, crystal 4 proves to be a member of few supramolecular salts crystallizing with IO4- anion according to the Cambridge Structure Database (CSD).

  19. Correlation between substrate bias, growth process and structural properties of phosphorus incorporated tetrahedral amorphous carbon films

    NASA Astrophysics Data System (ADS)

    Liu, Aiping; Zhu, Jiaqi; Han, Jiecai; Wu, Huaping; Jia, Zechun

    2007-09-01

    We investigate the growth process and structural properties of phosphorus incorporated tetrahedral amorphous carbon (ta-C:P) films which are deposited at different substrate biases by filtered cathodic vacuum arc technique with PH 3 as the dopant source. The films are characterized by X-ray photoelectron spectroscopy (XPS), atomic force microscopy, Raman spectroscopy, residual stress measurement, UV/VIS/NIR absorption spectroscopy and temperature-dependent conductivity measurement. The atomic fraction of phosphorus in the films as a function of substrate bias is obtained by XPS analysis. The optimum bias for phosphorus incorporation is about -80 V. Raman spectra show that the amorphous structures of all samples with atomic-scaled smooth surface are not remarkably changed when PH 3 is implanted, but some small graphitic crystallites are formed. Moreover, phosphorus impurities and higher-energetic impinging ions are favorable for the clustering of sp 2 sites dispersed in sp 3 skeleton and increase the level of structural ordering for ta-C:P films, which further releases the compressive stress and enhances the conductivity of the films. Our analysis establishes an interrelationship between microstructure, stress state, electrical properties, and substrate bias, which helps to understand the deposition mechanism of ta-C:P films.

  20. Collision-induced absorption in mixtures of symmetrical linear and tetrahedral molecules - Methane-nitrogen

    NASA Technical Reports Server (NTRS)

    Birnbaum, G.; Borysow, A.; Buechele, A.

    1993-01-01

    The far infrared absorption of a CH4-N2 mixture was measured at 297, 195, and 162 K from 30 to 650/cm. The spectral invariants gamma1 and alpha1, proportional, respectively, to the zeroth and first spectral moments, due to bimolecular collisions between CH4 and N2 were obtained from these data and compared with theoretical values. The theory for collision-induced dipoles between a tetrahedral and a diatomic or symmetrical linear molecule includes contributions not previously considered. Whereas the theoretical values of gamma1 are only somewhat greater than experiment at all temperatures, the theoretical values of alpha1 are significantly lower than the experimental values. From the theoretical spectral moments for the various induced dipole components, the parameters of the BC shape were computed, and theoretical spectra were constructed. Good agreement was obtained at the lower frequencies, but with increasing frequencies the theoretical spectra were increasingly less intense than the experimental spectra. Although the accuracy of the theoretical results may suffer from the lack of a reliable potential function, it does not appear that this high frequency discrepancy can be removed by any conceivable modification in the potential.

  1. Non-Axial Octupole Deformations and Tetrahedral Symmetry in Heavy Nuclei

    SciTech Connect

    Mazurek, Katarzyna; Dudek, Jerzy

    2005-11-21

    The total energies of about 120 nuclei in the Thorium region have been calculated within the macroscopic-microscopic method in the 5-dimensional space of deformation parameters {alpha}20, {alpha}22, {alpha}30, {alpha}32 and {alpha}40. The macroscopic energy term contains the nuclear surface-curvature dependence as proposed within the LSD approach. The microscopic energies are calculated with the Woods-Saxon single particle potential employing the universal set of parameters.We study a possible presence of the octupole axial and non-axial degrees of freedom all-over in the ({beta}, {gamma})-plane focussing on the ground-states, secondary minima and in the saddle points. In fact, a competition between axial and tri-axial octupole deformation parameters is obtained at the saddle points and in the secondary minima for many isotones with N > 136. The presence of the tetrahedral symmetry minima is predicted in numerous nuclei in the discussed region, although most of the time at relatively high excitation energies.

  2. Insights into Substrate Specificity and Metal Activation of Mammalian Tetrahedral Aspartyl Aminopeptidase

    SciTech Connect

    Chen, Yuanyuan; Farquhar, Erik R.; Chance, Mark R.; Palczewski, Krzysztof; Kiser, Philip D.

    2012-07-11

    Aminopeptidases are key enzymes involved in the regulation of signaling peptide activity. Here, we present a detailed biochemical and structural analysis of an evolutionary highly conserved aspartyl aminopeptidase called DNPEP. We show that this peptidase can cleave multiple physiologically relevant substrates, including angiotensins, and thus may play a key role in regulating neuron function. Using a combination of x-ray crystallography, x-ray absorption spectroscopy, and single particle electron microscopy analysis, we provide the first detailed structural analysis of DNPEP. We show that this enzyme possesses a binuclear zinc-active site in which one of the zinc ions is readily exchangeable with other divalent cations such as manganese, which strongly stimulates the enzymatic activity of the protein. The plasticity of this metal-binding site suggests a mechanism for regulation of DNPEP activity. We also demonstrate that DNPEP assembles into a functionally relevant tetrahedral complex that restricts access of peptide substrates to the active site. These structural data allow rationalization of the enzyme's preference for short peptide substrates with N-terminal acidic residues. This study provides a structural basis for understanding the physiology and bioinorganic chemistry of DNPEP and other M18 family aminopeptidases.

  3. Residual stress and Raman spectra of laser deposited highly-tetrahedral-coordinated-amorphous-carbon films

    SciTech Connect

    Friedmann, T.A.; Siegal, M.P.; Tallant, D.R.; Simpson, R.L.; Dominguez, F.

    1994-05-01

    We are studying carbon thin films by using a pulsed excimer laser to ablate pyrolytic graphite targets to form highly tetrahedral coordinated amorphous carbon ({alpha}t-C) films. These films have been grown on room temperature p-type Si (100) substrates without the intentional incorporation of hydrogen. In order to understand and optimize the growth of {alpha}t-C films, parametric studies of the growth parameters have been performed. We have also introduced various background gases (H{sub 2}, N{sub 2} and Ar) and varied the background gas pressure during deposition. The residual compressive stress levels in the films have been measured and correlated to changes in the Raman spectra of the {alpha}t-C band near 1565 cm{sup {minus}1}. The residual compressive stress falls with gas pressure, indicating a decreasing atomic sp{sup 3}-bonded carbon fraction. We find that reactive gases such as hydrogen and nitrogen significantly alter the Raman spectra at higher pressures. These effects are due to a combination of chemical incorporation of nitrogen and hydrogen into the film as well as collisional cooling of the ablation plume. In contrast, films grown in non-reactive Ar background gases show much less dramatic changes in the Raman spectra at similar pressures.

  4. Surface sites and unrelaxed surface energies of tetrahedral silica polymorphs and silicate

    NASA Astrophysics Data System (ADS)

    Murashov, Vladimir V.; Demchuk, Eugene

    2005-12-01

    Surface properties of respirable silica, which represents a major occupational safety concern, were investigated computationally, and a model for quantitative characterization of crystalline silica surface sites was developed. It was found that the surface energy of crystalline solids, such as silica and silicates, can be calculated as a product of the surface site density and site energy. The energies of sites formed by faceting tetrahedral silica polymorphs and aluminosilicate were determined by parametric fitting ab initio surface energies to site densities. Boltzmann's statistics was used to describe the distribution of faces as an exponential function of unrelaxed surface energy in the comminuted crystalline solids. Using these findings, crystallographic face distributions on fractured quartz, coesite, tridymite, and cristobalite were derived and average silanol hydroxyl densities in fractured particulate of these materials were estimated as 0.070, 0.059, 0.058, and 0.055 Å -2, respectively. The proposed method of quantitative characterization of the surface bridges the gap between microscopic simulations and measurable observables, such as cytotoxicity of respirable silica.

  5. Adsorption of carbon oxide on tetrahedral bimetallic gold-copper clusters

    NASA Astrophysics Data System (ADS)

    Gogol', V. V.; Pichugina, D. A.; Kuz'menko, N. E.

    2016-12-01

    The interaction between carbon oxide and [Au20-nCun]q clusters ( n = 0, 1, 19, 20 and q = 0, ±1) is studied by means of DFT/PBE in the scalar relativistic approximation. To establish the composition and structure of an adsorption site, isomers of bimetallic Au19Cu and AuCu19 particles with different positions of the heteroatom at an apex, edge, and face of the tetrahedral framework are considered. The optimized structures are used as the basis to determine the electronic properties of clusters (average bond energy per atom, difference of energies between the highest occupied molecular orbital (HOMO) and the lowest unoccupied molecular orbital (LUMO), ionization potential, electron affinity energy). The calculated parameters shrink as the copper content in clusters grows. Among the uncharged models, the highest CO adsorption energy is typical of Au19Cu, the heteroatom of which lies at a cluster's apex. The CO adsorption energy for cationic and anionic clusters grows in comparison to neutral clusters.

  6. Intense turquoise colors of apatite-type compounds with Mn5+ in tetrahedral coordination

    NASA Astrophysics Data System (ADS)

    Medina, Elena A.; Li, Jun; Stalick, Judith K.; Subramanian, M. A.

    2016-02-01

    The solid solutions of chlorapatite compounds Ba5Mn3-xVxO12Cl (x = 0-3.0) and Ba5Mn3-xPxO12Cl (x = 0-3.0) have been synthesized through solid state reactions and Pechini or sol-gel method using citric acid. The colors of the samples change from white (x = 3.0) through turquoise (x = 1.5) to dark green (x = 0) with increasing amount of manganese. Optical measurements reveal that the origin of the color is presumably a combination of d-d transitions of Mn5+ and cation-anion charge transfer from transition metals to oxygens. Near IR reflectance measurements indicate that synthesized compounds are promising materials for "cool pigments" applications. Magnetic measurements verify that manganese has two unpaired electrons and exhibits 5 + oxidation state. The IR spectra change systematically with sample compositions and the fingerprint region (700 cm-1 to 1100 cm-1) indicates characteristic bands belonging to (MnO4)3-, (VO4)3- and (PO4)3- functional groups. Structure refinements using neutron data confirm that Mn5+, V5+ and P5+ cations occupy the tetrahedral sites in the apatite structure.

  7. A spherical hohlraum design with tetrahedral 4 laser entrance holes and high radiation performance

    NASA Astrophysics Data System (ADS)

    Jiang, Shaoen; Jing, Longfei; Huang, Yunbao; Li, Haiyan; Huang, Tianxuan; Ding, Yongkun

    2016-12-01

    As usual cylindrical hohlraum with double laser ring cones may lead to serious laser-plasma interaction, such as the simulated Raman scatter and cross-beam energy transfer effect, spherical hohlraum with octahedral 6 Laser Entrance Holes (LEHs) and single cone laser beams, was investigated and reported to have a consistent high radiation symmetry during the whole implosion process. However, it has several potential challenges such as the smaller space left for diagnosis and the assembly of centrally located capsule. In this paper, based on the view-factor model, we investigate the radiation symmetry and the drive temperature on the capsule located in the spherical hohlraum with tetrahedral 4 LEHs and single cone laser beams, since there is more available space for laser disposition and diagnosis. Then, such target is optimized on the laser beam pointing direction to achieve a high radiation performance, i.e., the radiation symmetry and drive temperature on the capsule. Finally, an optimal spherical hohlraum with optimal laser beam pointing has been demonstrated and compared with the spherical hohlraum with octahedral 6 LEHs. The resulting radiation symmetry and the drive temperature shows that it has almost a similar radiation symmetry (the radiation asymmetry variation is no more than 0.2%), and higher drive temperature (the temperature has been increased by 1.73%, and an additional 133 kJ energy of 2 MJ energy for fusion can be saved).

  8. A Novel Spherical Hohlraum Design with Tetrahedral 4 Laser Entrance Holes and High Radiation Performance

    NASA Astrophysics Data System (ADS)

    Jing, Longfei; Huang, Yunbao; Jiang, Shaoen; Li, Haiyan; Huang, Tianxuan; Ding, Yongkun

    2016-10-01

    As usual cylindrical hohlraum with double laser ring cones may lead to serious CBET effect, spherical hohlraum with octahedral 6 LEHs and single laser ring cone is presented to achieve higher radiation symmetry during the fusion process. However, it has several potential problems such as the long run distance, smaller space is left for diagnose, and the assembly of centrally located capsule. In this paper, we investigate the radiation performance, i.e., radiation symmetry and drive temperature on the capsule in the spherical hohlraum with tetrahedral 4 LEHs and single laser ring cone, since there is more available space for laser disposition and diagnose. Then, such target is optimized on the laser beam pointing direction and shape sizes to achieve high radiation performance, or the radiation symmetry and drive temperature on the capsule. Finally, a novel spherical hohlraum with optimal laser beam pointing and shape size has been demonstrated to have almost similar radiation symmetry (the radiation asymmetry variation is no more than 0.2%), and higher drive temperature (the temperature has been increased by 1.73%, and additional 133 KJ energy of 2MJ energy for fusion can be utilized).. This work was supportedby NSAF#U1430124, and NSFC#51375185, #51405177, #11475154.

  9. A Novel Spherical Hohlraum Design with Tetrahedral 4 Laser Entrance Holes and High Radiation Performance

    NASA Astrophysics Data System (ADS)

    Huang, Yunbao; Jing, Longfei; Jiang, Shaoen

    2016-10-01

    As usual cylindrical hohlraum with double laser ring cones may lead to serious CBET, and LPI effect, spherical hohlraum with octahedral 6 LEHs and single laser ring cone is investigated and presented to achieve higher radiation symmetry during the fusion process. However, it has several potential problems such as the long run distance and the close distance between the spot and their closet LEH for the laser beams, smaller space is left for diagnose, and the assembly of centrally located capsule. In this paper, based on view-factor transportation model, we investigate the radiation symmetry and the drive temperature on the centrally located capsule in the spherical hohlraum with tetrahedral 4 LEHs and single laser ring cone, since there is more available space for laser disposition and diagnose. Then, such target is optimized on the laser beam pointing direction and shape sizes to achieve high radiation performance, or the radiation symmetry and drive temperature on the capsule. Finally, a novel spherical hohlraum with optimal laser beam pointing and shape size has been demonstrated to have almost similar radiation symmetry (the radiation asymmetry variation is no more than 0.2%), and higher drive temperature (the temperature has been increased by 1.73%, and additional 133 KJ energy of 2MJ energy for fusion can be utilized).

  10. Oral, intestinal, and skin bacteria in ventral hernia mesh implants

    PubMed Central

    Langbach, Odd; Kristoffersen, Anne Karin; Abesha-Belay, Emnet; Enersen, Morten; Røkke, Ola; Olsen, Ingar

    2016-01-01

    Background In ventral hernia surgery, mesh implants are used to reduce recurrence. Infection after mesh implantation can be a problem and rates around 6–10% have been reported. Bacterial colonization of mesh implants in patients without clinical signs of infection has not been thoroughly investigated. Molecular techniques have proven effective in demonstrating bacterial diversity in various environments and are able to identify bacteria on a gene-specific level. Objective The purpose of this study was to detect bacterial biofilm in mesh implants, analyze its bacterial diversity, and look for possible resemblance with bacterial biofilm from the periodontal pocket. Methods Thirty patients referred to our hospital for recurrence after former ventral hernia mesh repair, were examined for periodontitis in advance of new surgical hernia repair. Oral examination included periapical radiographs, periodontal probing, and subgingival plaque collection. A piece of mesh (1×1 cm) from the abdominal wall was harvested during the new surgical hernia repair and analyzed for bacteria by PCR and 16S rRNA gene sequencing. From patients with positive PCR mesh samples, subgingival plaque samples were analyzed with the same techniques. Results A great variety of taxa were detected in 20 (66.7%) mesh samples, including typical oral commensals and periodontopathogens, enterics, and skin bacteria. Mesh and periodontal bacteria were further analyzed for similarity in 16S rRNA gene sequences. In 17 sequences, the level of resemblance between mesh and subgingival bacterial colonization was 98–100% suggesting, but not proving, a transfer of oral bacteria to the mesh. Conclusion The results show great bacterial diversity on mesh implants from the anterior abdominal wall including oral commensals and periodontopathogens. Mesh can be reached by bacteria in several ways including hematogenous spread from an oral site. However, other sites such as gut and skin may also serve as sources for the

  11. Magnetic Resonance–Visible Meshes for Laparoscopic Ventral Hernia Repair

    PubMed Central

    Pallwein-Prettner, Leo; Koch, Oliver Owen; Luketina, Ruzica Rosalia; Lechner, Michael; Emmanuel, Klaus

    2015-01-01

    Background and Objectives: We aimed to evaluate the first human use of magnetic resonance–visible implants for intraperitoneal onlay repair of incisional hernias regarding magnetic resonance presentability. Methods: Ten patients were surgically treated with intraperitoneally positioned superparamagnetic flat meshes. A magnetic resonance investigation with a qualified protocol was performed on postoperative day 1 and at 3 months postoperatively to assess mesh appearance and demarcation. The total magnetic resonance–visible mesh surface area of each implant was calculated and compared with the original physical mesh size to evaluate potential reduction of the functional mesh surfaces. Results: We were able to show a precise mesh demarcation, as well as accurate assessment of the surrounding tissue, in all 10 cases. We documented a significant decrease in the magnetic resonance–visualized total mesh surface area after release of the pneumoperitoneum compared with the original mesh size (mean, 190 cm2 vs 225 cm2; mean reduction of mesh area, 35 cm2; P < .001). At 3 months postoperatively, a further reduction of the surface area due to significant mesh shrinkage could be observed (mean, 182 cm2 vs 190 cm2; mean reduction of mesh area, 8 cm2; P < .001). Conclusion: The new method of combining magnetic resonance imaging and meshes that provide enhanced signal capacity through direct integration of iron particles into the polyvinylidene fluoride base material allows for detailed mesh depiction and quantification of structural changes. In addition to a significant early postoperative decrease in effective mesh surface area, a further considerable reduction in size occurred within 3 months after implantation. PMID:25848195

  12. WE-D-9A-01: A Novel Mesh-Based Deformable Surface-Contour Registration

    SciTech Connect

    Zhong, Z; Cai, Y; Guo, X; Jia, X; Chiu, T; Kearney, V; Liu, H; Jiang, L; Chen, S; Yordy, J; Nedzi, L; Mao, W

    2014-06-15

    Purpose: Initial guess is vital for 3D-2D deformable image registration (DIR) while dealing with large deformations for adaptive radiation therapy. A fast procedure has been developed to deform body surface to match 2D body contour on projections. This surface-contour DIR will provide an initial deformation for further complete 3D DIR or image reconstruction. Methods: Both planning CT images and come-beam CT (CBCT) projections are preprocessed to create 0–1 binary mask. Then the body surface and CBCT projection body contours are extracted by Canny edge detector. A finite element modeling system was developed to automatically generate adaptive meshes based on the image surface. After that, the projections of the CT surface voxels are computed and compared with corresponding 2D projection contours from CBCT scans. As a result, the displacement vector field (DVF) on mesh vertices around the surface was optimized iteratively until the shortest Euclidean distance between the pixels on the projections of the deformed CT surface and the corresponding CBCT projection contour is minimized. With the help of the tetrahedral meshes, we can smoothly diffuse the deformation from the surface into the interior of the volume. Finally, the deformed CT images are obtained by the optimal DVF applied on the original planning CT images. Results: The accuracy of the surface-contour registration is evaluated by 3D normalized cross correlation increased from 0.9176 to 0.9957 (sphere-ellipsoid phantom) and from 0.7627 to 0.7919 (H and N cancer patient data). Under the GPU-based implementation, our surface-contour-guided method on H and N cancer patient data takes 8 seconds/iteration, about 7.5 times faster than direct 3D method (60 seconds/iteration), and it needs fewer optimization iterations (30 iterations vs 50 iterations). Conclusion: The proposed surface-contour DIR method can substantially improve both the accuracy and the speed of reconstructing volumetric images, which is helpful

  13. Synthesis of tetrahedral quasi-type-II CdSe-CdS core-shell quantum dots.

    PubMed

    Sugunan, Abhilash; Zhao, Yichen; Mitra, Somak; Dong, Lin; Li, Shanghua; Popov, Sergei; Marcinkevicius, Saulius; Toprak, Muhammet S; Muhammed, Mamoun

    2011-10-21

    Synthesis of colloidal nanocrystals of II-VI semiconductor materials has been refined in recent decades and their size dependent optoelectronic properties have been well established. Here we report a facile synthesis of CdSe-CdS core-shell heterostructures using a two-step hot injection process. Red-shifts in absorption and photoluminescence spectra show that the obtained quantum dots have quasi-type-II alignment of energy levels. The obtained nanocrystals have a heterostructure with a large and highly faceted tetrahedral CdS shell grown epitaxially over a spherical CdSe core. The obtained morphology as well as high resolution electron microscopy confirms that the tetrahedral shell have a zinc blende crystal structure. A phenomenological mechanism for the growth and morphology of the nanocrystals is discussed.

  14. Cytosine Nucleobase Ligand: A Suitable Choice for Modulating Magnetic Anisotropy in Tetrahedrally Coordinated Mononuclear Co(II) Compounds.

    PubMed

    Bruno, Rosaria; Vallejo, Julia; Marino, Nadia; De Munno, Giovanni; Krzystek, J; Cano, Joan; Pardo, Emilio; Armentano, Donatella

    2017-02-20

    A family of tetrahedral mononuclear Co(II) complexes with the cytosine nucleobase ligand is used as the playground for an in-depth study of the effects that the nature of the ligand, as well as their noninnocent distortions on the Co(II) environment, may have on the slow magnetic relaxation effects. Hence, those compounds with greater distortion from the ideal tetrahedral geometry showed a larger-magnitude axial magnetic anisotropy (D) together with a high rhombicity factor (E/D), and thus, slow magnetic relaxation effects also appear. In turn, the more symmetric compound possesses a much smaller value of the D parameter and, consequently, lacks single-ion magnet behavior.

  15. Development of a fully automated CFD system for three-dimensional flow simulations based on hybrid prismatic-tetrahedral grids

    SciTech Connect

    Berg, J.W. van der; Maseland, J.E.J.; Oskam, B.

    1996-12-31

    In this paper an assessment of CFD methods based on the underlying grid type is made. It is safe to say that emerging CFD methods based on hybrid body-fitted grids of tetrahedral and prismatic cells using unstructured data storage schemes have the potential to satisfy the basic requirements of problem-turnaround-time and accuracy for complex geometries. The CFD system described in this paper is based on the hybrid prismatic-tetrahedral grid approach. In an analysis it is shown that the cells in the prismatic layer have to satisfy a central symmetry property in order to obtain a second-order accurate approximation of the viscous terms in the Reynolds-averaged Navier-Stokes equations. Prismatic grid generation is demonstrated for the ONERA M6 wing-alone configuration and the AS28G wing/body configuration.

  16. Parallel deterministic transport sweeps of structured and unstructured meshes with overloaded mesh decompositions

    SciTech Connect

    Pautz, Shawn D.; Bailey, Teresa S.

    2016-11-29

    Here, the efficiency of discrete ordinates transport sweeps depends on the scheduling algorithm, the domain decomposition, the problem to be solved, and the computational platform. Sweep scheduling algorithms may be categorized by their approach to several issues. In this paper we examine the strategy of domain overloading for mesh partitioning as one of the components of such algorithms. In particular, we extend the domain overloading strategy, previously defined and analyzed for structured meshes, to the general case of unstructured meshes. We also present computational results for both the structured and unstructured domain overloading cases. We find that an appropriate amount of domain overloading can greatly improve the efficiency of parallel sweeps for both structured and unstructured partitionings of the test problems examined on up to 105 processor cores.

  17. Parallel deterministic transport sweeps of structured and unstructured meshes with overloaded mesh decompositions

    DOE PAGES

    Pautz, Shawn D.; Bailey, Teresa S.

    2016-11-29

    Here, the efficiency of discrete ordinates transport sweeps depends on the scheduling algorithm, the domain decomposition, the problem to be solved, and the computational platform. Sweep scheduling algorithms may be categorized by their approach to several issues. In this paper we examine the strategy of domain overloading for mesh partitioning as one of the components of such algorithms. In particular, we extend the domain overloading strategy, previously defined and analyzed for structured meshes, to the general case of unstructured meshes. We also present computational results for both the structured and unstructured domain overloading cases. We find that an appropriate amountmore » of domain overloading can greatly improve the efficiency of parallel sweeps for both structured and unstructured partitionings of the test problems examined on up to 105 processor cores.« less

  18. Incidence of Extrusion Following Type I Polypropylene Mesh “Kit” Repairs in the Correction of Pelvic Organ Prolapse

    PubMed Central

    Lukban, James C.; Beyer, Roger D.; Moore, Robert D.

    2012-01-01

    Introduction and Hypothesis. We sought to determine the mesh extrusion (vaginal exposure) rates and subject outcomes following IntePro (Type I polypropylene) mesh “kit” repairs for vaginal prolapse. Methods. Data were pooled from two prospective multicenter studies evaluating the safety and efficacy of the Perigee and Apogee (American Medical Systems, Minnetonka, Minn, USA) to treat anterior and posterior/apical prolapses, respectively. Extrusions involving the anterior compartment (AC) or posterior compartment/apex (PC/A) were recorded. Results. Two hundred sixty women underwent mesh placement, with a total of 368 mesh units inserted (173 in the AC and 195 in the PC/A). Extrusions were noted in 13 (7.5%) of AC implants and 27 (13.8%) of PC/A implants through 12 months. No difference was seen between those with and without extrusion in regard to anatomic cure, postoperative painor quality of life at 1 year. Conclusions. Extrusion had no apparent effect on short-term outcomes. Given the unknown long-term sequellae of vaginal mesh exposure, a thorough assessment of risks and benefits of transvaginal mesh placement should be considered at the time of preoperative planning. PMID:22190952

  19. Adaptive unstructured triangular mesh generation and flow solvers for the Navier-Stokes equations at high Reynolds number

    NASA Technical Reports Server (NTRS)

    Ashford, Gregory A.; Powell, Kenneth G.

    1995-01-01

    A method for generating high quality unstructured triangular grids for high Reynolds number Navier-Stokes calculations about complex geometries is described. Careful attention is paid in the mesh generation process to resolving efficiently the disparate length scales which arise in these flows. First the surface mesh is constructed in a way which ensures that the geometry is faithfully represented. The volume mesh generation then proceeds in two phases thus allowing the viscous and inviscid regions of the flow to be meshed optimally. A solution-adaptive remeshing procedure which allows the mesh to adapt itself to flow features is also described. The procedure for tracking wakes and refinement criteria appropriate for shock detection are described. Although at present it has only been implemented in two dimensions, the grid generation process has been designed with the extension to three dimensions in mind. An implicit, higher-order, upwind method is also presented for computing compressible turbulent flows on these meshes. Two recently developed one-equation turbulence models have been implemented to simulate the effects of the fluid turbulence. Results for flow about a RAE 2822 airfoil and a Douglas three-element airfoil are presented which clearly show the improved resolution obtainable.

  20. New oxygen-deficient cationic-ordered perovskites containing turquoise-coloring Mn5+O4 tetrahedral layers

    NASA Astrophysics Data System (ADS)

    Han, Yifeng; Ye, Xuanhong; Zhu, Hong; Li, Yuexiang; Kuang, Xiaojun

    2017-03-01

    Ba6Na2M2Mn2O17 (M=Nb, Ta) oxides were synthesized by high-temperature solid-state reaction. The compounds adopt 6-layer perovskite-related structure (referred to as 6C) in P 3 ̅m1, analogous to Ba6Na2Nb2P2O17. The 6C structure consists of cubic (c) BaO3 layers and pseudo-cubic (c') oxygen-vacancy-ordered BaO2 layers stacked according to a sequence of c'ccccc. Ordering of oxygen vacancies in oxygen-deficient c'-BaO2 layers leads to two successive isolated tetrahedral layers, which stabilize an unusual +5 oxidation state for Mn cations in the tetrahedral sites. In Ba6Na2M2Mn2O17, these two Mn5+O4 layers are sandwiched by two single octahedral NaO6 layers that connected by two successive octahedral NbO6 layers, forming alternative 2:1-ordered (Ba3NaM2O9)- and (Ba3NaMn2O8)+ perovskite-like units along the stacking direction. The Mn5+O4 tetrahedral units act as a turquoise chromophore in Ba6Na2M2Mn2O17, making these two compounds potential turquoise-coloring materials for the cool pigments.

  1. Activity of Cu{sup 2+} ions on the tetrahedral and octahedral sites of spinel oxide catalysts for CO oxidation

    SciTech Connect

    Ghose, J.; Murthy, K.S.R.C.

    1996-09-01

    In studies of CO oxidation on substituted copper chromite spinel oxide catalyst decreases as the Cu{sup 2+} content of the catalyst decreases, either by substitution with a divalent ion, i.e., Cu{sub 1-x} Mg{sub x} [Cr{sub 2}]O{sub 4}, or by reduction of Cu{sup 2+} to Cu{sup 1+}. Crystallographic studies have shown that Cu[Cr{sub 2}]O{sub 4} changes from normal to partially inverse when Cr{sup 3+} is replaced by Al{sup 3+}. Thus, in aluminum-substituted copper chromite catalysts, copper is present on both tetrahedral and octahedral sites of the spinel lattice, i.e., Cu{sub 1-x}Al{sub x} [Cu{sub x}Cr{sub 2-(x+y)}Al{sub y}]O{sub 4}. ESCA studies have shown that upon Al substitution some of the tetrahedral Cu{sup 2+} ions are reduced to Cu{sup 1+} and this causes a reduction in the catalytic activity of the catalysts. The present work was taken up to compare the activity of Cu{sup 2+} on tetrahedral sites with that on octahedral sites of the spinel oxide catalysts. For this, CO oxidation studies were carried out on the inverse spinel CuFe{sub 2}O{sub 4} and on the normal spinel CuRh{sub 2}O{sub 4} catalysts. 7 refs., 1 fig.

  2. Observation by sup 13 C NMR of the EPSP synthase tetrahedral intermediate bound to the enzyme active site

    SciTech Connect

    Anderson, K.S.; Sammons, R.D.; Leo, G.C.; Sikorski, J.A. ); Benesi, A.J.; Johnson, K.A. )

    1990-02-13

    Direct observation of the tetrahedral intermediate in the EPSP synthase reaction pathway was provided by {sup 13}C NMR by examining the species bound to the enzyme active site under internal equilibrium conditions and using (2-{sup 13}C)PEP as a spectroscopic probe. The tetrahedral center of the intermediate bound to the enzyme gave a unique signal appearing at 104 ppm. Separate signals were observed for free EPSP and EPSP bound to the enzyme in a ternary complex with phosphate. These peak assignments account for the quantitation of the species bound to the enzyme and liberated upon quenching with either triethylamine or base. A comparison of quenching with acid, base, or triethylamine was conducted. After long times of incubation during the NMR measurement, a signal at 107 ppm appeared. The compound giving rise to this resonance was isolated and identified as an EPSP ketal. The rate of formation of the EPSP ketal was very slow establishing that it is a side product of the normal enzymatic reaction. To look for additional signals that might arise from a covalent adduct which has been postulated to arise from reaction of enzyme with PEP, and NMR experiment was performed with an analogue of S3P lacking the 4- and 5-hydroxyl groups. All of these results reaffirm identification of the tetrahedral species as the only observable intermediate in the EPSP synthase reaction.

  3. Synthesis and Catalytic Activity of Pt Monolayer on Pd Tetrahedral Nanocrystals with CO-adsorption-induced Removal of Surfactants

    SciTech Connect

    Gong K.; Vukmirovic M.B.; Ma C.; Zhu Y.; Adzic R.R.

    2011-11-01

    We synthesized the Pt monolayer shell-Pd tetrahedral core electrocatalysts that are notable for their high activity and stable performance. A small number of low-coordination sites and defects, and high content of the (1 1 1)-oriented facets on Pd tetrahedron makes them a suitable support for a Pt monolayer to obtain an active O{sub 2} reduction reaction (ORR) electrocatalyst. The surfactants, used to control size and shape of Pd tetrahedral nanoparticles, are difficult to remove and cause adverse effects on the ORR. We describe a simple and noninvasive method to synthesize high-purity tetrahedral Pd nanocrystals (TH Pd) by combining a hydrothermal route and CO adsorption-induced removal of surfactants. Poly(vinylpyrrolidone) (PVP), used as a protecting and reducing agent in hydrothermal reactions, is strongly bonded to the surface of the resulting nanocrystals. We demonstrate that PVP was displaced efficiently by adsorbed CO. A clean surface was achieved upon CO stripping at a high potential (1.0 V vs RHE). It played a decisive role in improving the activity of the Pt monolayer/TH Pd electrocatalyst for the ORR. Furthermore, the results demonstrate a versatile method for removal of surfactants from various nanoparticles that severely limited their applications.

  4. Tetrahedral shapes of neutron-rich Zr isotopes from a multidimensionally constrained relativistic Hartree-Bogoliubov model

    NASA Astrophysics Data System (ADS)

    Zhao, Jie; Lu, Bing-Nan; Zhao, En-Guang; Zhou, Shan-Gui

    2017-01-01

    We develop a multidimensionally constrained relativistic Hartree-Bogoliubov (MDC-RHB) model in which the pairing correlations are taken into account by making the Bogoliubov transformation. In this model, the nuclear shape is assumed to be invariant under the reversion of x and y axes; i.e., the intrinsic symmetry group is V4 and all shape degrees of freedom βλ μ with even μ are included self-consistently. The RHB equation is solved in an axially deformed harmonic oscillator basis. A separable pairing force of finite range is adopted in the MDC-RHB model. The potential energy curves of neutron-rich even-even Zr isotopes are calculated with relativistic functionals DD-PC1 and PC-PK1 and possible tetrahedral shapes in the ground and isomeric states are investigated. The ground state shape of 110Zr is predicted to be tetrahedral with both functionals and so is that of 112Zr with the functional DD-PC1. The tetrahedral ground states are caused by large energy gaps around Z =40 and N =70 when β32 deformation is included. Although the inclusion of the β30 deformation can also reduce the energy around β20=0 and lead to minima with pear-like shapes for nuclei around 110Zr, these minima are unstable due to their shallowness.

  5. Octahedral-tetrahedral equilibrium and solvent exchange of cobalt(II) ions in primary alkylamines.

    PubMed

    Aizawa, Sen-ichi; Funahashi, Shigenobu

    2002-08-26

    The enthalpy differences (Delta H degrees ) of the equilibrium between the octahedral and tetrahedral solvated cobalt(II) complexes were obtained in some primary alkylamines such as propylamine (pa, 36.1 +/- 2.3 kJ mol(-1)), n-hexylamine (ha, 34.9 +/- 1.0 kJ mol(-1)), 2-methoxyethylamine (meea, 44.8 +/- 3.1 kJ mol(-1)), and benzylamine (ba, 50.1 +/- 3.6 kJ mol(-1)) by the spectrophotometric method. The differences in the energy levels between the two geometries of the cobalt(II) complexes in the spherically symmetric field (Delta E(spher)) were estimated from the values of Delta H degrees by offsetting the ligand field stabilization energies. It was indicated that the value of Delta E(spher) is the decisive factor in determining the value of Delta H degrees and is largely dependent on the electronic repulsion between the d-electrons and the donor atoms and the interelectronic repulsion in the d orbitals. The comparison between activation enthalpies (Delta H(++)) for the solvent exchange reactions of octahedral cobalt(II) ions in pa and meea revealed that the unexpectedly large rate constant and small Delta H(++) in pa are attributed to the strong electronic repulsion in the ground state and removal of the electronic repulsion in the dissociative transition state, which can give the small Delta E(spher) between the ground and transition states. Differences in the solvent exchange rates and the DeltaH(++) values of the octahedral metal(II) ions in some other solvents are discussed in connection with the electronic repulsive factors.

  6. The stability of a crystal with diamond structure for patchy particles with tetrahedral symmetry

    NASA Astrophysics Data System (ADS)

    Noya, Eva G.; Vega, Carlos; Doye, Jonathan P. K.; Louis, Ard A.

    2010-06-01

    The phase diagram of model anisotropic particles with four attractive patches in a tetrahedral arrangement has been computed at two different values of the range of the potential, with the aim of investigating the conditions under which a diamond crystal can be formed. We find that the diamond phase is never stable for our longer-ranged potential. At low temperatures and pressures, the fluid freezes into a body-centered-cubic solid that can be viewed as two interpenetrating diamond lattices with a weak interaction between the two sublattices. Upon compression, an orientationally ordered face-centered-cubic crystal becomes more stable than the body-centered-cubic crystal, and at higher temperatures, a plastic face-centered-cubic phase is stabilized by the increased entropy due to orientational disorder. A similar phase diagram is found for the shorter-ranged potential, but at low temperatures and pressures, we also find a region over which the diamond phase is thermodynamically favored over the body-centered-cubic phase. The higher vibrational entropy of the diamond structure with respect to the body-centered-cubic solid explains why it is stable even though the enthalpy of the latter phase is lower. Some preliminary studies on the growth of the diamond structure starting from a crystal seed were performed. Even though the diamond phase is never thermodynamically stable for the longer-ranged model, direct coexistence simulations of the interface between the fluid and the body-centered-cubic crystal and between the fluid and the diamond crystal show that at sufficiently low pressures, it is quite probable that in both cases the solid grows into a diamond crystal, albeit involving some defects. These results highlight the importance of kinetic effects in the formation of diamond crystals in systems of patchy particles.

  7. Simple shearing flow of dry soap foams with TCP structure[Tetrahedrally Close-Packed

    SciTech Connect

    REINELT,DOUGLAS A.; KRAYNIK,ANDREW M.

    2000-02-16

    The microrheology of dry soap foams subjected to large, quasistatic, simple shearing deformations is analyzed. Two different monodisperse foams with tetrahedrally close-packed (TCP) structure are examined: Weaire-Phelan (A15) and Friauf-Laves (C15). The elastic-plastic response is evaluated by calculating foam structures that minimize total surface area at each value of strain. The minimal surfaces are computed with the Surface Evolver program developed by Brakke. The foam geometry and macroscopic stress are piecewise continuous functions of strain. The stress scales as T/V{sup 1/3} where T is surface tension and V is cell volume. Each discontinuity corresponds to large changes in foam geometry and topology that restore equilibrium to unstable configurations that violate Plateau's laws. The instabilities occur when the length of an edge on a polyhedral foam cell vanishes. The length can tend to zero smoothly or abruptly with strain. The abrupt case occurs when a small increase in strain changes the energy profile in the neighborhood of a foam structure from a local minimum to a saddle point, which can lead to symmetry-breaking bifurcations. In general, the new foam topology associated with each stable solution branch results from a cascade of local topology changes called T1 transitions. Each T1 cascade produces different cell neighbors, reduces surface energy, and provides an irreversible, film-level mechanism for plastic yield behavior. Stress-strain curves and average stresses are evaluated by examining foam orientations that admit strain-periodic behavior. For some orientations, the deformation cycle includes Kelvin cells instead of the original TCP structure; but the foam does not remain perfectly ordered. Bifurcations during subsequent T1 cascades lead to disorder and can even cause strain localization.

  8. The stability of a crystal with diamond structure for patchy particles with tetrahedral symmetry.

    PubMed

    Noya, Eva G; Vega, Carlos; Doye, Jonathan P K; Louis, Ard A

    2010-06-21

    The phase diagram of model anisotropic particles with four attractive patches in a tetrahedral arrangement has been computed at two different values of the range of the potential, with the aim of investigating the conditions under which a diamond crystal can be formed. We find that the diamond phase is never stable for our longer-ranged potential. At low temperatures and pressures, the fluid freezes into a body-centered-cubic solid that can be viewed as two interpenetrating diamond lattices with a weak interaction between the two sublattices. Upon compression, an orientationally ordered face-centered-cubic crystal becomes more stable than the body-centered-cubic crystal, and at higher temperatures, a plastic face-centered-cubic phase is stabilized by the increased entropy due to orientational disorder. A similar phase diagram is found for the shorter-ranged potential, but at low temperatures and pressures, we also find a region over which the diamond phase is thermodynamically favored over the body-centered-cubic phase. The higher vibrational entropy of the diamond structure with respect to the body-centered-cubic solid explains why it is stable even though the enthalpy of the latter phase is lower. Some preliminary studies on the growth of the diamond structure starting from a crystal seed were performed. Even though the diamond phase is never thermodynamically stable for the longer-ranged model, direct coexistence simulations of the interface between the fluid and the body-centered-cubic crystal and between the fluid and the diamond crystal show that at sufficiently low pressures, it is quite probable that in both cases the solid grows into a diamond crystal, albeit involving some defects. These results highlight the importance of kinetic effects in the formation of diamond crystals in systems of patchy particles.

  9. Thermal expansion and structural complexity of Ba silicates with tetrahedrally coordinated Si atoms

    NASA Astrophysics Data System (ADS)

    Gorelova, Liudmila A.; Bubnova, Rimma S.; Krivovichev, Sergey V.; Krzhizhanovskaya, Maria G.; Filatov, Stanislav K.

    2016-03-01

    Thermal expansion of Ba silicates with tetrahedrally coordinated Si atoms in the temperature range of 25-1100 °C had been studied by high-temperature X-ray powder diffraction. The volume thermal expansion coefficients (TECs) are in the range 41-50×10-6 °C-1 with an average value of <αV > = 45 ×10-6 °C-1. In the structures with chain and layered silicate anions, thermal expansion is anisotropic: the direction of maximal TEC is parallel to the extension of the zweier chains of silicate tetrahedra, which are strained owing to the interactions with Ba2+. The strain is released during thermal expansion due to the increasing effective size of Ba2+ induced by thermal vibrations. Information-theoretic analysis of the structural and topological complexities of Ba silicates indicates that their structural complexity is a function of the topological complexity of their silicate anions. The latter displays a non-linear behaviour with increasing SiO2 content (=the increasing degree of polymerization and increasing dimensionality): it starts from simple topologies, reaches a maximum at topologies of intermediate complexity, and ends up at simple topologies again. The specificity of the interactions of Ba2+ with the silicate anions results in higher complexity of high-temperature α-BaSi2O5 compared to that of low-temperature β-BaSi2O5. This uncommon behaviour may be explained by the vibrational advantages provided by flatter and more complex silicate layers in the α-phase, which overcome negative differences in configurational entropies of the two modifications apparent in the differences of their structural Shannon information.

  10. Nanodiamonds on tetrahedral amorphous carbon significantly enhance dopamine detection and cell viability.

    PubMed

    Peltola, Emilia; Wester, Niklas; Holt, Katherine B; Johansson, Leena-Sisko; Koskinen, Jari; Myllymäki, Vesa; Laurila, Tomi

    2017-02-15

    We hypothesize that by using integrated carbon nanostructures on tetrahedral amorphous carbon (ta-C), it is possible to take the performance and characteristics of these bioelectrodes to a completely new level. The integrated carbon electrodes were realized by combining nanodiamonds (NDs) with ta-C thin films coated on Ti-coated Si-substrates. NDs were functionalized with mixture of carboxyl and amine groups NDandante or amine NDamine, carboxyl NDvox or hydroxyl groups NDH and drop-casted or spray-coated onto substrate. By utilizing these novel structures we show that (i) the detection limit for dopamine can be improved by two orders of magnitude [from 10µM to 50nM] in comparison to ta-C thin film electrodes and (ii) the coating method significantly affects electrochemical properties of NDs and (iii) the ND coatings selectively promote cell viability. NDandante and NDH showed most promising electrochemical properties. The viability of human mesenchymal stem cells and osteoblastic SaOS-2 cells was increased on all ND surfaces, whereas the viability of mouse neural stem cells and rat neuroblastic cells was improved on NDandante and NDH and reduced on NDamine and NDvox. The viability of C6 cells remained unchanged, indicating that these surfaces will not cause excess gliosis. In summary, we demonstrated here that by using functionalized NDs on ta-C thin films we can significantly improve sensitivity towards dopamine as well as selectively promote cell viability. Thus, these novel carbon nanostructures provide an interesting concept for development of various in vivo targeted sensor solutions.

  11. Simple shearing flow of dry soap foams with tetrahedrally close-packed structure

    SciTech Connect

    Reinelt, Douglas A.; Kraynik, Andrew M.

    2000-05-01

    The microrheology of dry soap foams subjected to quasistatic, simple shearing flow is analyzed. Two different monodisperse foams with tetrahedrally close-packed (TCP) structure are examined: Weaire-Phelan (A15) and Friauf-Laves (C15). The elastic-plastic response is evaluated by using the Surface Evolver to calculate foam structures that minimize total surface area at each value of strain. The foam geometry and macroscopic stress are piecewise continuous functions of strain. The stress scales as T/V{sup 1/3}, where T is surface tension and V is cell volume. Each discontinuity corresponds to large changes in foam geometry and topology that restore equilibrium to unstable configurations that violate Plateau's laws. The instabilities occur when the length of an edge on a polyhedral foam cell vanishes. The length can tend to zero smoothly or abruptly with strain. The abrupt case occurs when a small increase in strain changes the energy profile in the neighborhood of a foam structure from a local minimum to a saddle point, which can lead to symmetry-breaking bifurcations. In general, the new structure associated with each stable solution branch results from an avalanche of local topology changes called T1 transitions. Each T1 cascade produces different cell neighbors, reduces surface energy, and provides an irreversible, film-level mechanism for plastic yield behavior. Stress-strain curves and average stresses are evaluated by examining foam orientations that admit strain-periodic behavior. For some orientations, the deformation cycle includes Kelvin cells instead of the original TCP structure; but the foam does not remain perfectly ordered. Bifurcations during subsequent T1 cascades lead to disorder and can even cause strain localization. (c) 2000 Society of Rheology.

  12. Tetrahedral Clusters of GaMo 4S 8-Type Compounds: A Metal Bonding Analysis

    NASA Astrophysics Data System (ADS)

    Le Beuze, A.; Loirat, H.; Zerrouki, M. C.; Lissillour, R.

    1995-11-01

    Extended Hückel tight binding calculations have been performed on ligated as well as on ligand-free Mo4 and Mo6 extended frames, in order to analyze the metal-metal bonding within the clusters and particularly the appreciable changes of the metal-metal bond lengths through the M4 tetrahedral units contained in GaM4X8 (M = Mo, Nb, V, Ta; X = S, Se, Te), Mo4S4Y4 (Y = Cl, Br, I). A comparison with the M6 octahedral units of the M Mo6X8 (M = Pb, Ag, La; X = S, Se) series is made. By means of DOS, COOP curves, and overlap populations, results clearly display the strong reorganization of the electronic structure of the bare metal clusters network while the ligand interactions occur, inducing a strong reduction of the strength of the metal-metal bonds. We outline the relationship between the metal-metal bond lengths and various parameters such as the valence electron count (VEC) per cluster and the nature of the ligands. Our results indicate that the two series M4 and M6 differ: M-M bond lengths are unaffected by the VEC in the regular M4 cluster, whereas some M-M bond lengths undergo a significant change when the VEC increases in the distorded M6 clusters. Likewise, it is worthy to note that metal d orbitals have a more significant effect in M4 cluster series. In contrast, the metal-ligand covalency induces similar elongations of metal-metal bonds in the two series.

  13. Importance of Tetrahedral Iron during Microbial Reduction of Clay Mineral NAu-2

    NASA Astrophysics Data System (ADS)

    Shi, B.; Wu, L.; Liu, K.; Smeaton, C. M.; Li, W.; Beard, B. L.; Johnson, C.; Roden, E. E.; Van Cappellen, P.

    2015-12-01

    Transformations between Fe(II) and Fe(III) in ferruginous clay minerals significantly impact the physicochemical properties of soils and sediments, such as the ion exchange capacity and redox potential. An increasing number of studies have focused on clay minerals that undergo redox changes, however, none have so far addressed Fe isotope fractionation during these processes. In this study, Fe isotope fractionations were determined during microbial reduction of Fe(III) in nontronite NAu-2 with different concentrations of lactate. No secondary Fe-bearing minerals, including Fe oxides, were detected by SEM in over 100 days of incubation, suggesting that the measured fractionations only reflected the net isotope effect associated with the clay minerals. The initial reduction likely started from edge sites, and the reductive dissolution released aqueous Fe(II). Basal plane sorbed Fe(II) was detectable after the extent of Fe reduction exceeded 5% and extensive electron transfer and isotope exchange had occurred between basal plane sorbed Fe(II) and structural Fe(III). With lower concentrations of the lactate(40 mM), the maximum Fe isotope fractionation was larger (∆56Febasal Fe(II)-structure Fe(III)= -4.37‰), consistent with greater adsorption than in systems with more lactate. After the Fe in reactive sites was all reduced, isotope exchange between Fe(II) and structural Fe(III) was inhibited due to blockage of electron transfer pathways by the collapse of the clay layers. The results agree with another study in our group on microbial reduction of NAu-1, despite both the smaller extent of reduction (~10% vs. 22% max bioreduction for NAu-1 and NAu-2, respectively) and smaller isotope fractionation factor than for NAu-2. We speculate that tetrahedral Fe in NAu-2 may have accelerated the electron transfer between Fe atoms, thus inducing a higher extent of reduction and a larger Fe isotope fractionation compared to NAu-1.

  14. Adaptive mesh refinement and adjoint methods in geophysics simulations

    NASA Astrophysics Data System (ADS)

    Burstedde, Carsten

    2013-04-01

    It is an ongoing challenge to increase the resolution that can be achieved by numerical geophysics simulations. This applies to considering sub-kilometer mesh spacings in global-scale mantle convection simulations as well as to using frequencies up to 1 Hz in seismic wave propagation simulations. One central issue is the numerical cost, since for three-dimensional space discretizations, possibly combined with time stepping schemes, a doubling of resolution can lead to an increase in storage requirements and run time by factors between 8 and 16. A related challenge lies in the fact that an increase in resolution also increases the dimensionality of the model space that is needed to fully parametrize the physical properties of the simulated object (a.k.a. earth). Systems that exhibit a multiscale structure in space are candidates for employing adaptive mesh refinement, which varies the resolution locally. An example that we found well suited is the mantle, where plate boundaries and fault zones require a resolution on the km scale, while deeper area can be treated with 50 or 100 km mesh spacings. This approach effectively reduces the number of computational variables by several orders of magnitude. While in this case it is possible to derive the local adaptation pattern from known physical parameters, it is often unclear what are the most suitable criteria for adaptation. We will present the goal-oriented error estimation procedure, where such criteria are derived from an objective functional that represents the observables to be computed most accurately. Even though this approach is well studied, it is rarely used in the geophysics community. A related strategy to make finer resolution manageable is to design methods that automate the inference of model parameters. Tweaking more than a handful of numbers and judging the quality of the simulation by adhoc comparisons to known facts and observations is a tedious task and fundamentally limited by the turnaround times

  15. On Convergence Acceleration Techniques for Unstructured Meshes

    NASA Technical Reports Server (NTRS)

    Mavriplis, Dimitri J.

    1998-01-01

    A discussion of convergence acceleration techniques as they relate to computational fluid dynamics problems on unstructured meshes is given. Rather than providing a detailed description of particular methods, the various different building blocks of current solution techniques are discussed and examples of solution strategies using one or several of these ideas are given. Issues relating to unstructured grid CFD problems are given additional consideration, including suitability of algorithms to current hardware trends, memory and cpu tradeoffs, treatment of non-linearities, and the development of efficient strategies for handling anisotropy-induced stiffness. The outlook for future potential improvements is also discussed.

  16. Perspective on the Lagrange-Jacobi mesh

    NASA Astrophysics Data System (ADS)

    Rampho, Gaotsiwe J.

    2016-07-01

    This paper presents a unified treatment of the kinetic energy matrix elements related to a number of Lagrange functions associated with the Lagrange-Jacobi mesh. The matrix elements can be readily modified for application to problems requiring eigenfunction expansion with Lagrange-Legendre, Lagrange-Chebyshev, Lagrange-Gegenbauer, as well as the Lagrange-Jacobi functions. The applicability of and the accuracy attainable with the matrix elements is demonstrated with the solution to the Schrödinger equation for confining trigonometric Pöschl-Teller potentials. The results obtained are within machine accuracy when appropriate choices of the basis functions are used.

  17. Earth As An Unstructured Mesh and Its Recovery from Seismic Waveform Data

    NASA Astrophysics Data System (ADS)

    De Hoop, M. V.

    2015-12-01

    We consider multi-scale representations of Earth's interior from thepoint of view of their possible recovery from multi- andhigh-frequency seismic waveform data. These representations areintrinsically connected to (geologic, tectonic) structures, that is,geometric parametrizations of Earth's interior. Indeed, we address theconstruction and recovery of such parametrizations using localiterative methods with appropriately designed data misfits andguaranteed convergence. The geometric parametrizations containinterior boundaries (defining, for example, faults, salt bodies,tectonic blocks, slabs) which can, in principle, be obtained fromsuccessive segmentation. We make use of unstructured meshes. For the adaptation and recovery of an unstructured mesh we introducean energy functional which is derived from the Hausdorff distance. Viaan augmented Lagrangian method, we incorporate the mentioned datamisfit. The recovery is constrained by shape optimization of theinterior boundaries, and is reminiscent of Hausdorff warping. We useelastic deformation via finite elements as a regularization whilefollowing a two-step procedure. The first step is an update determinedby the energy functional; in the second step, we modify the outcome ofthe first step where necessary to ensure that the new mesh isregular. This modification entails an array of techniques includingtopology correction involving interior boundary contacting andbreakup, edge warping and edge removal. We implement this as afeed-back mechanism from volume to interior boundary meshesoptimization. We invoke and apply a criterion of mesh quality controlfor coarsening, and for dynamical local multi-scale refinement. Wepresent a novel (fluid-solid) numerical framework based on theDiscontinuous Galerkin method.

  18. A Mesh-Duox pathway regulates homeostasis in the insect gut.

    PubMed

    Xiao, Xiaoping; Yang, Lijuan; Pang, Xiaojing; Zhang, Rudian; Zhu, Yibin; Wang, Penghua; Gao, Guanjun; Cheng, Gong

    2017-03-01

    The metazoan gut harbours complex communities of commensal and symbiotic bacterial microorganisms. The quantity and quality of these microorganisms fluctuate dynamically in response to physiological changes. The mechanisms that hosts have developed to respond to and manage such dynamic changes and maintain homeostasis remain largely unknown. Here, we identify a dual oxidase (Duox)-regulating pathway that contributes to maintaining homeostasis in the gut of both Aedes aegypti and Drosophila melanogaster. We show that a gut-membrane-associated protein, named Mesh, plays an important role in controlling the proliferation of gut bacteria by regulating Duox expression through an Arrestin-mediated MAPK JNK/ERK phosphorylation cascade. Expression of both Mesh and Duox is correlated with the gut bacterial microbiome, which, in mosquitoes, increases dramatically soon after a blood meal. Ablation of Mesh abolishes Duox induction, leading to an increase of the gut microbiome load. Our study reveals that the Mesh-mediated signalling pathway is a central homeostatic mechanism of the insect gut.

  19. Laparoscopic Transabdominal Preperitoneal Inguinal Hernia Repair Using Memory-Ring Mesh: A Pilot Study

    PubMed Central

    Nomura, Tsutomu; Matsuda, Akihisa; Takao, Yoshimune

    2016-01-01

    Purpose. To evaluate the feasibility, safety, and effectiveness of laparoscopic transabdominal preperitoneal (TAPP) inguinal hernia repair using a memory-ring patch (Polysoft™ mesh). Patients and Methods. Between April 2010 and March 2013, a total of 76 inguinal hernias underwent TAPP repair using Polysoft mesh in 67 adults under general anesthesia. Three different senior resident surgeons performed TAPP repair under the instruction of a specialist surgeon. Nine patients had bilateral hernias. The 76 hernias included 37 indirect inguinal hernias, 29 direct hernias, 1 femoral hernia, 1 pantaloon hernia (combined direct/indirect inguinal hernia), and 8 recurrent hernias after open anterior hernia repair. The immediate postoperative outcomes as well as the short-term outcomes (mainly recurrence and incidence of chronic pain) were studied. Results. There was no conversion from TAPP repair to anterior open repair. The mean operation time was 109 minutes (range, 40–132) for unilateral hernia repair. Scrotal seroma was diagnosed at the operation site in 5 patients. No patient had operation-related orchitis, testicle edema, trocar site infection, or chronic pain during follow-up. Conclusions. The use of Polysoft mesh for TAPP inguinal hernia repair does not seem to adversely affect the quality of repair. The use of this mesh is therefore feasible and safe and may reduce postoperative pain. PMID:27635414

  20. Laparoscopic Transabdominal Preperitoneal Inguinal Hernia Repair Using Memory-Ring Mesh: A Pilot Study.

    PubMed

    Matsutani, Takeshi; Nomura, Tsutomu; Hagiwara, Nobutoshi; Matsuda, Akihisa; Takao, Yoshimune; Uchida, Eiji

    2016-01-01

    Purpose. To evaluate the feasibility, safety, and effectiveness of laparoscopic transabdominal preperitoneal (TAPP) inguinal hernia repair using a memory-ring patch (Polysoft™ mesh). Patients and Methods. Between April 2010 and March 2013, a total of 76 inguinal hernias underwent TAPP repair using Polysoft mesh in 67 adults under general anesthesia. Three different senior resident surgeons performed TAPP repair under the instruction of a specialist surgeon. Nine patients had bilateral hernias. The 76 hernias included 37 indirect inguinal hernias, 29 direct hernias, 1 femoral hernia, 1 pantaloon hernia (combined direct/indirect inguinal hernia), and 8 recurrent hernias after open anterior hernia repair. The immediate postoperative outcomes as well as the short-term outcomes (mainly recurrence and incidence of chronic pain) were studied. Results. There was no conversion from TAPP repair to anterior open repair. The mean operation time was 109 minutes (range, 40-132) for unilateral hernia repair. Scrotal seroma was diagnosed at the operation site in 5 patients. No patient had operation-related orchitis, testicle edema, trocar site infection, or chronic pain during follow-up. Conclusions. The use of Polysoft mesh for TAPP inguinal hernia repair does not seem to adversely affect the quality of repair. The use of this mesh is therefore feasible and safe and may reduce postoperative pain.