Real-time quantitative Schlieren imaging by fast Fourier demodulation of a checkered backdrop

NASA Astrophysics Data System (ADS)

Wildeman, Sander

2018-06-01

A quantitative synthetic Schlieren imaging (SSI) method based on fast Fourier demodulation is presented. Instead of a random dot pattern (as usually employed in SSI), a 2D periodic pattern (such as a checkerboard) is used as a backdrop to the refractive object of interest. The range of validity and accuracy of this "Fast Checkerboard Demodulation" (FCD) method are assessed using both synthetic data and experimental recordings of patterns optically distorted by small waves on a water surface. It is found that the FCD method is at least as accurate as sophisticated, multi-stage, digital image correlation (DIC) or optical flow (OF) techniques used with random dot patterns, and it is significantly faster. Efficient, fully vectorized, implementations of both the FCD and DIC/OF schemes developed for this study are made available as open source Matlab scripts.

Schlieren System Enhancements at GRC

NASA Technical Reports Server (NTRS)

Woike, Mark; Clem, Michelle M.

2013-01-01

This presentation describes the latest improvements that have been made to the Schlieren systems at the NASA Glenn Research Center. These systems are used for the visualization of flow and shock structures in our wind tunnel test facilities. Improvements have been made to the optics, light sources and knife edges using the latest state-of-the-art technology. The eventual goal of this upgrade work is to improve the sensitivity of the systems so that they can be used to make quantitative flow measurements.

Background oriented schlieren in a density stratified fluid.

PubMed

Verso, Lilly; Liberzon, Alex

2015-10-01

Non-intrusive quantitative fluid density measurement methods are essential in the stratified flow experiments. Digital imaging leads to synthetic schlieren methods in which the variations of the index of refraction are reconstructed computationally. In this study, an extension to one of these methods, called background oriented schlieren, is proposed. The extension enables an accurate reconstruction of the density field in stratified liquid experiments. Typically, the experiments are performed by the light source, background pattern, and the camera positioned on the opposite sides of a transparent vessel. The multimedia imaging through air-glass-water-glass-air leads to an additional aberration that destroys the reconstruction. A two-step calibration and image remapping transform are the key components that correct the images through the stratified media and provide a non-intrusive full-field density measurements of transparent liquids.

Smartphone schlieren and shadowgraph imaging

NASA Astrophysics Data System (ADS)

Settles, Gary S.

2018-05-01

Schlieren and shadowgraph techniques are used throughout the realm of scientific experimentation to reveal transparent refractive phenomena, but the requirement of large precise optics has kept them mostly out of reach of the public. New developments, including the ubiquity of smartphones with high-resolution digital cameras and the Background-Oriented Schlieren technique (BOS), which replaces the precise optics with digital image processing, have changed these circumstances. This paper demonstrates a number of different schlieren and shadowgraph setups and image examples based only on a smartphone, its software applications, and some inexpensive accessories. After beginning with a simple traditional schlieren system the emphasis is placed on what can be visualized and measured using BOS and digital slit-scan imaging on the smartphone. Thermal plumes, liquid mixing and glass are used as subjects of investigation. Not only recreational and experimental photography, but also serious scientific imaging can be done.

Identifying Coherent Structures in a 3-Stream Supersonic Jet Flow using Time-Resolved Schlieren Imaging

NASA Astrophysics Data System (ADS)

Tenney, Andrew; Coleman, Thomas; Berry, Matthew; Magstadt, Andy; Gogineni, Sivaram; Kiel, Barry

2015-11-01

Shock cells and large scale structures present in a three-stream non-axisymmetric jet are studied both qualitatively and quantitatively. Large Eddy Simulation is utilized first to gain an understanding of the underlying physics of the flow and direct the focus of the physical experiment. The flow in the experiment is visualized using long exposure Schlieren photography, with time resolved Schlieren photography also a possibility. Velocity derivative diagnostics are calculated from the grey-scale Schlieren images are analyzed using continuous wavelet transforms. Pressure signals are also captured in the near-field of the jet to correlate with the velocity derivative diagnostics and assist in unraveling this complex flow. We acknowledge the support of AFRL through an SBIR grant.

Schlieren optics for leak detection

NASA Technical Reports Server (NTRS)

Peale, Robert E.; Ruffin, Alranzo B.

1995-01-01

The purpose of this research was to develop an optical method of leak detection. Various modifications of schlieren optics were explored with initial emphasis on leak detection of the plumbing within the orbital maneuvering system of the space shuttle (OMS pod). The schlieren scheme envisioned for OMS pod leak detection was that of a high contrast pattern on flexible reflecting material imaged onto a negative of the same pattern. We find that the OMS pod geometry constrains the characteristic length scale of the pattern to the order of 0.001 inch. Our experiments suggest that optical modulation transfer efficiency will be very low for such patterns, which will limit the sensitivity of the technique. Optical elements which allow a negative of the scene to be reversibly recorded using light from the scene itself were explored for their potential in adaptive single-ended schlieren systems. Elements studied include photochromic glass, bacteriorhodopsin, and a transmissive liquid crystal display. The dynamics of writing and reading patterns were studied using intensity profiles from recorded images. Schlieren detection of index gradients in air was demonstrated.

A comprehensive statistical investigation of schlieren image velocimetry (SIV) using high-velocity helium jet

NASA Astrophysics Data System (ADS)

Biswas, Sayan; Qiao, Li

2017-03-01

A detailed statistical assessment of seedless velocity measurement using Schlieren Image Velocimetry (SIV) was explored using open source Robust Phase Correlation (RPC) algorithm. A well-known flow field, an axisymmetric turbulent helium jet, was analyzed near and intermediate region (0≤ x/d≤ 20) for two different Reynolds numbers, Re d = 11,000 and Re d = 22,000 using schlieren with horizontal knife-edge, schlieren with vertical knife-edge and shadowgraph technique, and the resulted velocity fields from SIV techniques were compared to traditional Particle Image Velocimetry (PIV) measurements. A novel, inexpensive, easy to setup two-camera SIV technique had been demonstrated to measure high-velocity turbulent jet, with jet exit velocities 304 m/s (Mach = 0.3) and 611 m/s (Mach = 0.6), respectively. Several image restoration and enhancement techniques were tested to improve signal to noise ratio (SNR) in schlieren and shadowgraph images. Processing and post-processing parameters for SIV techniques were examined in detail. A quantitative comparison between self-seeded SIV techniques and traditional PIV had been made using correlation statistics. While the resulted flow field from schlieren with horizontal knife-edge and shadowgraph showed excellent agreement with PIV measurements, schlieren with vertical knife-edge performed poorly. The performance of spatial cross-correlations at different jet locations using SIV techniques and PIV was evaluated. Turbulence quantities like turbulence intensity, mean velocity fields, Reynolds shear stress influenced spatial correlations and correlation plane SNR heavily. Several performance metrics such as primary peak ratio (PPR), peak to correlation energy (PCE), the probability distribution of signal and noise were used to compare capability and potential of different SIV techniques.

Interpretation of the rainbow color scale for quantitative medical imaging: perceptually linear color calibration (CSDF) versus DICOM GSDF

NASA Astrophysics Data System (ADS)

Chesterman, Frédérique; Manssens, Hannah; Morel, Céline; Serrell, Guillaume; Piepers, Bastian; Kimpe, Tom

2017-03-01

Medical displays for primary diagnosis are calibrated to the DICOM GSDF1 but there is no accepted standard today that describes how display systems for medical modalities involving color should be calibrated. Recently the Color Standard Display Function3,4 (CSDF), a calibration using the CIEDE2000 color difference metric to make a display as perceptually linear as possible has been proposed. In this work we present the results of a first observer study set up to investigate the interpretation accuracy of a rainbow color scale when a medical display is calibrated to CSDF versus DICOM GSDF and a second observer study set up to investigate the detectability of color differences when a medical display is calibrated to CSDF, DICOM GSDF and sRGB. The results of the first study indicate that the error when interpreting a rainbow color scale is lower for CSDF than for DICOM GSDF with statistically significant difference (Mann-Whitney U test) for eight out of twelve observers. The results correspond to what is expected based on CIEDE2000 color differences between consecutive colors along the rainbow color scale for both calibrations. The results of the second study indicate a statistical significant improvement in detecting color differences when a display is calibrated to CSDF compared to DICOM GSDF and a (non-significant) trend indicating improved detection for CSDF compared to sRGB. To our knowledge this is the first work that shows the added value of a perceptual color calibration method (CSDF) in interpreting medical color images using the rainbow color scale. Improved interpretation of the rainbow color scale may be beneficial in the area of quantitative medical imaging (e.g. PET SUV, quantitative MRI and CT and doppler US), where a medical specialist needs to interpret quantitative medical data based on a color scale and/or detect subtle color differences and where improved interpretation accuracy and improved detection of color differences may contribute to a better

An improved large-field focusing schlieren system

NASA Technical Reports Server (NTRS)

Weinstein, Leonard M.

1991-01-01

The analysis and performance of a high-brightness large-field focusing schlieren system is described. The system can be used to examine complex two- and three-dimensional flows. Techniques are described to obtain focusing schlieren through distorting optical elements, to use multiple colors in a time multiplexing technique, and to use diffuse screen holography for three-dimensional photographs.

Schlieren technique in soap film flows

NASA Astrophysics Data System (ADS)

Auliel, M. I.; Hebrero, F. Castro; Sosa, R.; Artana, G.

2017-05-01

We propose the use of the Schlieren technique as a tool to analyse the flows in soap film tunnels. The technique enables to visualize perturbations of the film produced by the interposition of an object in the flow. The variations of intensity of the image are produced as a consequence of the deviations of the light beam traversing the deformed surfaces of the film. The quality of the Schlieren image is compared to images produced by the conventional interferometric technique. The analysis of Schlieren images of a cylinder wake flow indicates that this technique enables an easy visualization of vortex centers. Post-processing of series of two successive images of a grid turbulent flow with a dense motion estimator is used to derive the velocity fields. The results obtained with this self-seeded flow show good agreement with the statistical properties of the 2D turbulent flows reported on the literature.

Focusing-schlieren visualization in a dual-mode scramjet

NASA Astrophysics Data System (ADS)

Kouchi, Toshinori; Goyne, Christopher P.; Rockwell, Robert D.; McDaniel, James C.

2015-12-01

Schlieren imaging is particularly suited to measuring density gradients in compressible flowfields and can be used to capture shock waves and expansion fans, as well as the turbulent structures of mixing and wake flows. Conventional schlieren imaging, however, has difficulty clearly capturing such structures in long-duration supersonic combustion test facilities. This is because the severe flow temperatures locally change the refractive index of the window glass that is being used to provide optical access. On the other hand, focusing-schlieren imaging presents the potential of reduced sensitivity to thermal distortion of the windows and to clearly capture the flow structures even during a combustion test. This reduced sensitivity is due the technique's ability to achieve a narrow depth of focus. As part of this study, a focusing-schlieren system was developed with a depth of focus near ±5 mm and was applied to a direct-connect, continuous-flow type, supersonic combustion test facility with a stagnation temperature near 1200 K. The present system was used to successfully visualize the flowfield inside a dual-mode scramjet. The imaging system captured combustion-induced volumetric expansion of the fuel jet and an anchored bifurcated shock wave at the trailing edge of the ramp fuel injector. This is the first time successful focusing-schlieren measurements have been reported for a dual-mode scramjet.

Pattern-projected schlieren imaging method using a diffractive optics element

NASA Astrophysics Data System (ADS)

Min, Gihyeon; Lee, Byung-Tak; Kim, Nac Woo; Lee, Munseob

2018-04-01

We propose a novel schlieren imaging method by projecting a random dot pattern, which is generated in a light source module that includes a diffractive optical element. All apparatuses are located in the source side, which leads to one-body sensor applications. This pattern is distorted by the deflections of schlieren objects such that the displacement vectors of random dots in the pixels can be obtained using the particle image velocity algorithm. The air turbulences induced by a burning candle, boiling pot, heater, and gas torch were successfully imaged, and it was shown that imaging up to a size of 0.7 m  ×  0.57 m is possible. An algorithm to correct the non-uniform sensitivity according to the position of a schlieren object was analytically derived. This algorithm was applied to schlieren images of lenses. Comparing the corrected versions to the original schlieren images, we showed a corrected uniform sensitivity of 14.15 times on average.

Simultaneous schlieren photography and soot foil in the study of detonation phenomena

NASA Astrophysics Data System (ADS)

Kellenberger, Mark; Ciccarelli, Gaby

2017-10-01

The use of schlieren photography has been essential in unravelling the complex nature of high-speed combustion phenomena, but its line-of-sight integration makes it difficult to decisively determine the nature of multi-dimensional combustion wave propagation. Conventional schlieren alone makes it impossible to determine in what plane across the channel an observed structure may exist. To overcome this, a technique of simultaneous high-speed schlieren photography and soot foils was demonstrated that can be applied to the study of detonation phenomena. Using a kerosene lamp, soot was deposited on a glass substrate resulting in a semi-transparent sheet through which schlieren source light could pass. In order to demonstrate the technique, experiments were carried out in mixtures of stoichiometric hydrogen-oxygen at initial pressures between 10 and 15 kPa. Compared to schlieren imaging obtained without a sooted foil, high-speed video results show schlieren images with a small reduction of contrast with density gradients remaining clear. Areas of high temperature cause soot lofted from the foil to incandescence strongly, resulting in the ability to track hot spots and flame location. Post-processing adjustments were demonstrated to make up for camera sensitivity limitations to enable viewing of schlieren density gradients. High-resolution glass soot foils were produced that enable direct coupling of schlieren video to triple-point trajectories seen on the soot foils, allowing for the study of three-dimensional propagation mechanisms of detonation waves.

Schlieren Cinematography of Current Driven Plasma Jet Dynamics

NASA Astrophysics Data System (ADS)

Loebner, Keith; Underwood, Thomas; Cappelli, Mark

2016-10-01

Schlieren cinematography of a pulsed plasma deflagration jet is presented and analyzed. An ultra-high frame rate CMOS camera coupled to a Z-type laser Schlieren apparatus is used to obtain flow-field refractometry data for the continuous flow Z-pinch formed within the plasma deflagration jet. The 10 MHz frame rate for 256 consecutive frames provides high temporal resolution, enabling turbulent fluctuations and plasma instabilities to be visualized over the course of a single pulse (20 μs). The Schlieren signal is radiometrically calibrated to obtain a two dimensional mapping of the refraction angle of the axisymmetric pinch plasma, and this mapping is then Abel inverted to derive the plasma density distribution as a function radius, axial coordinate, and time. Analyses of previously unknown discharge characteristics and comparisons with prior work are discussed.

Gravitational Effects on Flow Instability and Transition in Low Density Jets

NASA Technical Reports Server (NTRS)

Agrawal, Ajay K.; Parthasarathy, Ramkumar

2004-01-01

Experiments were conducted in Earth gravity and microgravity to acquire quantitative data on near field flow structure of helium jets injected into air. Microgravity conditions were simulated in the 2.2-second drop tower at NASA Glenn Research Center. The jet flow was observed by quantitative rainbow schlieren deflectometry, a non-intrusive line of sight measurement technique suited for the microgravity environment. The flow structure was characterized by distributions of helium mole fraction obtained from color schlieren images taken at 60 Hz. Results show that the jet in microgravity was up to 70 percent wider than that in Earth gravity. Experiments reveal that the global flow oscillations observed in Earth gravity are absent in microgravity. The report provides quantitative details of flow evolution as the experiment undergoes change in gravity in the drop tower.

Self-synchronizing Schlieren photography and interferometry for the visualization of unsteady transonic flows

NASA Technical Reports Server (NTRS)

Kadlec, R.

1979-01-01

The use of self synchronizing stroboscopic Schlieren and laser interferometer systems to obtain quantitative space time measurements of distinguished flow surfaces, steakline patterns, and the density field of two dimensional flows that exhibit a periodic content was investigated. A large field single path stroboscopic Schlieren system was designed, constructed and successfully applied to visualize four periodic flows: near wake behind an oscillating airfoil; edge tone sound generation; 2-D planar wall jet; and axisymmetric pulsed sonic jet. This visualization technique provides an effective means of studying quasi-periodic flows in real time. The image on the viewing screen is a spatial signal average of the coherent periodic motion rather than a single realization, the high speed motion of a quasi-periodic flow can be reconstructed by recording photographs of the flow at different fixed time delays in one cycle. The preliminary design and construction of a self synchronizing stroboscopic laser interferometer with a modified Mach-Zehnder optical system is also reported.

Background Oriented Schlieren (BOS) and other Flow Visualization Developments and Applications at GRC

NASA Technical Reports Server (NTRS)

Clem, Michelle; Woike, Mark

2013-01-01

This is a presentation to be given at an internal NASA Advanced Schlieren Working Group Meeting. The presentation will cover the recent developments and applications of flow visualization methods at GRC. The topics being discussed will include the use of Background Oriented Schlieren (BOS) in the study of screech and its associated shock spacing as well as in the investigation of broadband shock noise reduction in the Jet-Surface Interaction Tests. In addition, other flow visualiztion methods will be discussed in an on-going study comparing schlieren, shadowgraph, BOS, and focusing schlieren.

Study of optical techniques for the Ames unitary wind tunnels. Part 1: Schlieren

NASA Technical Reports Server (NTRS)

Lee, George

1992-01-01

Alignment procedures and conceptual designs for the rapid alignment of the Ames Unitary Wind Tunnel schlieren systems were devised. The schlieren systems can be aligned by translating the light source, the mirrors, and the knife edge equal distances. One design for rapid alignment consists of a manual pin locking scheme. The other is a motorized electronic position scheme. A study of two optical concepts which can be used with the schlieren system was made. These are the 'point diffraction interferometers' and the 'focus schlieren'. Effects of vibrations were studied.

White Light Schlieren Optics Using Bacteriorhodopsin as an Adaptive Image Grid

NASA Technical Reports Server (NTRS)

Peale, Robert; Ruffin, Boh; Donahue, Jeff; Barrett, Carolyn

1996-01-01

A Schlieren apparatus using a bacteriorhodopsin film as an adaptive image grid with white light illumination is demonstrated for the first time. The time dependent spectral properties of the film are characterized. Potential applications include a single-ended Schlieren system for leak detection.

High-speed schlieren imaging of rocket exhaust plumes

NASA Astrophysics Data System (ADS)

Coultas-McKenney, Caralyn; Winter, Kyle; Hargather, Michael

2016-11-01

Experiments are conducted to examine the exhaust of a variety of rocket engines. The rocket engines are mounted in a schlieren system to allow high-speed imaging of the engine exhaust during startup, steady state, and shutdown. A variety of rocket engines are explored including a research-scale liquid rocket engine, consumer/amateur solid rocket motors, and water bottle rockets. Comparisons of the exhaust characteristics, thrust and cost for this range of rockets is presented. The variety of nozzle designs, target functions, and propellant type provides unique variations in the schlieren imaging.

Schlieren photography on freely flying hawkmoth.

PubMed

Liu, Yun; Roll, Jesse; Van Kooten, Stephen; Deng, Xinyan

2018-05-01

The aerodynamic force on flying insects results from the vortical flow structures that vary both spatially and temporally throughout flight. Due to these complexities and the inherent difficulties in studying flying insects in a natural setting, a complete picture of the vortical flow has been difficult to obtain experimentally. In this paper, Schlieren , a widely used technique for highspeed flow visualization, was adapted to capture the vortex structures around freely flying hawkmoth ( Manduca ). Flow features such as leading-edge vortex, trailing-edge vortex, as well as the full vortex system in the wake were visualized directly. Quantification of the flow from the Schlieren images was then obtained by applying a physics-based optical flow method, extending the potential applications of the method to further studies of flying insects. © 2018 The Author(s).

Optical Flow for Flight and Wind Tunnel Background Oriented Schlieren Imaging

NASA Technical Reports Server (NTRS)

Smith, Nathanial T.; Heineck, James T.; Schairer, Edward T.

2017-01-01

Background oriented Schlieren images have historically been generated by calculating the observed pixel displacement between a wind-on and wind-o image pair using normalized cross-correlation. This work uses optical flow to solve the displacement fields which generate the Schlieren images. A well established method used in the computer vision community, optical flow is the apparent motion in an image sequence due to brightness changes. The regularization method of Horn and Schunck is used to create Schlieren images using two data sets: a supersonic jet plume shock interaction from the NASA Ames Unitary Plan Wind Tunnel, and a transonic flight test of a T-38 aircraft using a naturally occurring background, performed in conjunction with NASA Ames and Armstrong Research Centers. Results are presented and contrasted with those using normalized cross-correlation. The optical flow Schlieren images are found to provided significantly more detail. We apply the method to historical data sets to demonstrate the broad applicability and limitations of the technique.

Gravitational Effects on Near Field Flow Structure of Low Density Gas Jets

NASA Technical Reports Server (NTRS)

Griffin, D. W.; Yep, T. W.; Agrawal, A. K.

2005-01-01

Experiments were conducted in Earth gravity and microgravity to acquire quantitative data on near field flow structure of helium jets injected into air. Microgravity conditions were simulated in the 2.2- second drop tower at NASA Glenn Research Center. The jet flow was observed by quantitative rainbow schlieren deflectometry, a non-intrusive line of site measurement technique for the whole field. The flow structure was characterized by distributions of angular deflection and helium mole percentage obtained from color schlieren images taken at 60 Hz. Results show that the jet in microgravity was up to 70 percent wider than that in Earth gravity. The global jet flow oscillations observed in Earth gravity were absent in microgravity, providing direct experimental evidence that the flow instability in the low density jet was buoyancy induced. The paper provides quantitative details of temporal flow evolution as the experiment undergoes change in gravity in the drop tower.

Development of Schlieren Imaging for Analysis of Supersonic Complex Multi-stream Rectangular Nozzle

NASA Astrophysics Data System (ADS)

Coleman, Thomas; Berry, Matthew; Magstadt, Andrew; Gogineni, Sivaram; Glauser, Mark; Skytop Turbulence Laboratories Team; Spectral Energies LLC. Collaboration

2015-11-01

A schlieren apparatus has been installed to provide the shock structure of the flow in a supersonic complex multi-stream rectangular jet nozzle. The schlieren images collected are being used for analysis which is paired with unsteady pressure data taken simultaneously, both of which complement PIV data taken in same facility. The schlieren setup is of Herschellian z-type configuration aligned vertically and perpendicular to the nozzle exit. By making use of large twin parabolic mirrors, a 12.5 inch diameter test window has been achieved, capable of capturing the evolution of shock cells from development to collapse. An LED light source was used with its driver circuit to allow for controlled microsecond pulses for collecting time resolved schlieren. Schlieren results to date indicate that there is a shock train arising inside the nozzle and persisting downstream that is quasi steady. This has also been observed in simulations. The shock structure appears to have a dominant effect in that they localize and provide the skeleton for the other flow structures, affecting and being affected by the adjacent shear layers. We would like to acknowledge SBIR Phase 2 with Spectral Energies under direction of Barry Kiel (Program Manager).

Exploring microwave resonant multi-point ignition using high-speed schlieren imaging

NASA Astrophysics Data System (ADS)

Liu, Cheng; Zhang, Guixin; Xie, Hong; Deng, Lei; Wang, Zhi

2018-03-01

Microwave plasma offers a potential method to achieve rapid combustion in a high-speed combustor. In this paper, microwave resonant multi-point ignition and its control method have been studied via high-speed schlieren imaging. The experiment was conducted with the microwave resonant ignition system and the schlieren optical system. The microwave pulse in 2.45 GHz with 2 ms width and 3 kW peak power was employed as an ignition energy source to produce initial flame kernels in the combustion chamber. A reflective schlieren method was designed to illustrate the flame development process with a high-speed camera. The bottom of the combustion chamber was made of a quartz glass coated with indium tin oxide, which ensures sufficient microwave reflection and light penetration. Ignition experiments were conducted at 2 bars of stoichiometric methane-air mixtures. Schlieren images show that flame kernels were generated at more than one location simultaneously and flame propagated with different speeds in different flame kernels. Ignition kernels were discussed in three types according to their appearances. Pressure curves and combustion duration also show that multi-point ignition plays a significant role in accelerating combustion.

Exploring microwave resonant multi-point ignition using high-speed schlieren imaging.

PubMed

Liu, Cheng; Zhang, Guixin; Xie, Hong; Deng, Lei; Wang, Zhi

2018-03-01

Microwave plasma offers a potential method to achieve rapid combustion in a high-speed combustor. In this paper, microwave resonant multi-point ignition and its control method have been studied via high-speed schlieren imaging. The experiment was conducted with the microwave resonant ignition system and the schlieren optical system. The microwave pulse in 2.45 GHz with 2 ms width and 3 kW peak power was employed as an ignition energy source to produce initial flame kernels in the combustion chamber. A reflective schlieren method was designed to illustrate the flame development process with a high-speed camera. The bottom of the combustion chamber was made of a quartz glass coated with indium tin oxide, which ensures sufficient microwave reflection and light penetration. Ignition experiments were conducted at 2 bars of stoichiometric methane-air mixtures. Schlieren images show that flame kernels were generated at more than one location simultaneously and flame propagated with different speeds in different flame kernels. Ignition kernels were discussed in three types according to their appearances. Pressure curves and combustion duration also show that multi-point ignition plays a significant role in accelerating combustion.

Gravitational Effects on Near Field Flow Structure of Low Density Gas Jets

NASA Technical Reports Server (NTRS)

Yep, Tze-Wing; Agrawal, Ajay K.; Griffin, DeVon; Salzman, Jack (Technical Monitor)

2001-01-01

Experiments were conducted in Earth gravity and microgravity to acquire quantitative data on near field flow structure of helium jets injected into air. Microgravity conditions were simulated in the 2.2-second drop tower at NASA Glenn Research Center. The jet flow was observed by quantitative rainbow schlieren deflectometry, a non-intrusive line of site measurement technique for the whole field. The flow structure was characterized by distributions of angular deflection and helium mole percentage obtained from color schlieren images taken at 60 Hz. Results show that the jet flow was significantly influenced by the gravity. The jet in microgravity was up to 70 percent wider than that in Earth gravity. The jet flow oscillations observed in Earth gravity were absent in microgravity, providing direct experimental evidence that the flow instability in the low density jet was buoyancy induced. The paper provides quantitative details of temporal flow evolution as the experiment undergoes a change in gravity in the drop tower.

Seeing the Invisible with Schlieren Imaging

ERIC Educational Resources Information Center

Lekholm, Ville; Ramme, Goran; Thornell, Greger

2011-01-01

Schlieren imaging is a method for visualizing differences in refractive index as caused by pressure or temperature non-uniformities within a medium, or as caused by the mixing of two fluids. It is an inexpensive yet powerful and straightforward tool for sensitive and high-resolution visualization of otherwise invisible phenomena. In this article,…

Background-Oriented Schlieren (BOS) for Scramjet Inlet-isolator Investigation

NASA Astrophysics Data System (ADS)

Che Idris, Azam; Rashdan Saad, Mohd; Hing Lo, Kin; Kontis, Konstantinos

2018-05-01

Background-oriented Schlieren (BOS) technique is a recently invented non-intrusive flow diagnostic method which has yet to be fully explored in its capabilities. In this paper, BOS technique has been applied for investigating the general flow field characteristics inside a generic scramjet inlet-isolator with Mach 5 flow. The difficulty in finding the delicate balance between measurement sensitivity and measurement area image focusing has been demonstrated. The differences between direct cross-correlation (DCC) and Fast Fourier Transform (FFT) raw data processing algorithm have also been demonstrated. As an exploratory study of BOS capability, this paper found that BOS is simple yet robust enough to be used to visualize complex flow in a scramjet inlet in hypersonic flow. However, in this case its quantitative data can be strongly affected by 3-dimensionality thus obscuring the density value with significant errors.

Background-Oriented Schlieren used in a hypersonic inlet test at NASA GRC

NASA Technical Reports Server (NTRS)

Clem, Michelle; Woike, Mark; Saunders, John

2016-01-01

Background Oriented Schlieren (BOS) is a derivative of the classical schlieren technology, which is used to visualize density gradients, such as shock wave structures in a wind tunnel. Changes in refractive index resulting from density gradients cause light rays to bend, resulting in apparent motion of a random background pattern. The apparent motion of the pattern is determined using cross-correlation algorithms (between no-flow and with-flow image pairs) producing a schlieren-like image. One advantage of BOS is its simplified setup which enables a larger field-of-view (FOV) than traditional schlieren systems. In the present study, BOS was implemented into the Combined Cycle Engine Large-Scale Inlet Mode Transition Experiment (CCE LIMX) in the 10x10 Supersonic Wind Tunnel at NASA Glenn Research Center. The model hardware for the CCE LIMX accommodates a fully integrated turbine based combined cycle propulsion system. To date, inlet mode transition between turbine and ramjet operation has been successfully demonstrated. High-speed BOS was used to visualize the behavior of the flow structures shock waves during unsteady inlet unstarts, a phenomenon known as buzz. Transient video images of inlet buzz were recorded for both the ramjet flow path (high speed inlet) and turbine flow path (low speed inlet). To understand the stability limits of the inlet, operation was pushed to the point of unstart and buzz. BOS was implemented in order to view both inlets simultaneously, since the required FOV was beyond the capability of the current traditional schlieren system. An example of BOS data (Images 1-6) capturing inlet buzz are presented.

Using Schlieren Visualization to Track Detonator Performance

NASA Astrophysics Data System (ADS)

Clarke, S. A.; Bolme, C. A.; Murphy, M. J.; Landon, C. D.; Mason, T. A.; Adrian, R. J.; Akinci, A. A.; Martinez, M. E.; Thomas, K. A.

2007-12-01

Several experiments will be presented that are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation, to full detonation, to transition, to booster and booster detonation. High-speed multiframe schlieren imagery has been used to study several explosive initiation events, such as exploding bridgewires (EBWs), exploding foil initiators (EFIs or "slappers"), direct optical initiation (DOI), and electrostatic discharge. Additionally, a series of tests has been performed on "cut-back" detonators with varying initial pressing heights. We have also used this diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. Future applications to other explosive events, such as boosters and insensitive high explosives booster evaluation, will be discussed. The EPIC finite element code has been used to analyze the shock fronts from the schlieren images to solve iteratively for consistent boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator.

Using Schlieren Visualization to Track Detonator Performance

NASA Astrophysics Data System (ADS)

Clarke, Steven; Thomas, Keith; Martinez, Michael; Akinci, Adrian; Murphy, Michael; Adrian, Ronald

2007-06-01

Several experiments that are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation to full detonation to transition to booster and booster detonation will be presented. High Speed Laser Schlieren Movies have been used to study several explosive initiation events, such as exploding bridgewires (EBW), Exploding Foil Initiators (EFI) (or slappers), Direct Optical Initiation (DOI), and ElectroStatic Discharge (ESD). Additionally, a series of tests have been performed on ``cut-back'' detonators with varying initial pressing (IP) heights. We have also used this diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. Future applications to other explosive events such as boosters and IHE booster evaluation will be discussed. EPIC Hydrodynamic code has been used to analyze the shock fronts from the Schlieren images to reverse calculate likely boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator. LA-UR-07-1229

High-speed multi-frame laser Schlieren for visualization of explosive events

NASA Astrophysics Data System (ADS)

Clarke, S. A.; Murphy, M. J.; Landon, C. D.; Mason, T. A.; Adrian, R. J.; Akinci, A. A.; Martinez, M. E.; Thomas, K. A.

2007-09-01

High-Speed Multi-Frame Laser Schlieren is used for visualization of a range of explosive and non-explosive events. Schlieren is a well-known technique for visualizing shock phenomena in transparent media. Laser backlighting and a framing camera allow for Schlieren images with very short (down to 5 ns) exposure times, band pass filtering to block out explosive self-light, and 14 frames of a single explosive event. This diagnostic has been applied to several explosive initiation events, such as exploding bridgewires (EBW), Exploding Foil Initiators (EFI) (or slappers), Direct Optical Initiation (DOI), and ElectroStatic Discharge (ESD). Additionally, a series of tests have been performed on "cut-back" detonators with varying initial pressing (IP) heights. We have also used this Diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. The setup has also been used to visualize a range of other explosive events, such as explosively driven metal shock experiments and explosively driven microjets. Future applications to other explosive events such as boosters and IHE booster evaluation will be discussed. Finite element codes (EPIC, CTH) have been used to analyze the schlieren images to determine likely boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator. These experiments are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation to full detonation to transition to booster and booster detonation.

Detonator Performance Characterization using Multi-Frame Laser Schlieren Imaging

NASA Astrophysics Data System (ADS)

Clarke, Steven; Landon, Colin; Murphy, Michael; Martinez, Michael; Mason, Thomas; Thomas, Keith

2009-06-01

Multi-frame Laser Schlieren Imaging of shock waves produced by detonators in transparent witness materials can be used to evaluate detonator performance. We use inverse calculations of the 2D propagation of shock waves in the EPIC finite element model computer code to calculate a temporal-spatial-pressure profile on the surface of the detonator that is consistent with the experimental shock waves from the schlieren imaging. Examples of calculated 2D temporal-spatial-pressure profiles from a range of detonator types (EFI --exploding foil initiators, DOI -- direct optical initiation, EBW -- exploding bridge wire, hotwire), detonator HE materials (PETN, HMX, etc), and HE densities. Also pressure interaction profiles from the interaction of multiple shock waves will be shown. LA-UR-09-00909.

Simultaneous visualization of transonic buffet on a rocket faring model using unsteady PSP measurement and Schlieren method

NASA Astrophysics Data System (ADS)

Nakakita, K.

2017-02-01

Simultaneous visualization technique of the combination of the unsteady Pressure-Sensitive Paint and the Schlieren measurement was introduced. It was applied to a wind tunnel test of a rocket faring model at the JAXA 2mx2m transonic wind tunnel. Quantitative unsteady pressure field was acquired by the unsteady PSP measurement, which consisted of a high-speed camera, high-power laser diode, and so on. Qualitative flow structure was acquired by the Schlieren measurement using a high-speed camera and Xenon lamp with a blue optical filter. Simultaneous visualization was achieved 1.6 kfps frame rate and it gave the detailed structure of unsteady flow fields caused by the unsteady shock wave oscillation due to shock-wave/boundary-layer interaction around the juncture between cone and cylinder on the model. Simultaneous measurement results were merged into a movie including surface pressure distribution on the rocket faring and spatial structure of shock wave system concerning to transonic buffet. Constructed movie gave a timeseries and global information of transonic buffet flow field on the rocket faring model visually.

On the initial singularity problem in rainbow cosmology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Santos, Grasiele; Gubitosi, Giulia; Amelino-Camelia, Giovanni, E-mail: grasiele.dossantos@icranet.org, E-mail: g.gubitosi@imperial.ac.uk, E-mail: giovanni.amelino-camelia@roma1.infn.it

2015-08-01

It has been recently claimed that the initial singularity might be avoided in the context of rainbow cosmology, where one attempts to account for quantum-gravitational corrections through an effective-theory description based on an energy-dependent ('rainbow') spacetime metric. We here scrutinize this exciting hypothesis much more in depth than previous analyses. In particular, we take into account all requirements for singularity avoidance, while previously only a subset of these requirements had been considered. Moreover, we show that the implications of a rainbow metric for thermodynamics are more significant than previously appreciated. Through the analysis of two particularly meaningful examples of rainbowmore » metrics we find that our concerns are not merely important conceptually, but actually change in quantitatively significant manner the outcome of the analysis. Notably we only find examples where the singularity is not avoided, though one can have that in the regime where our semi-classical picture is still reliable the approach to the singularity is slowed down when compared to the standard classical scenario. We conclude that the study of rainbow metrics provides tantalizing hints of singularity avoidance but is inconclusive, since some key questions remain to be addressed just when the scale factor is very small, a regime which, as here argued, cannot be reliably described by an effective rainbow-metric picture.« less

On the Uses of Full-Scale Schlieren Flow Visualization

NASA Astrophysics Data System (ADS)

Settles, G. S.; Miller, J. D.; Dodson-Dreibelbis, L. J.

2000-11-01

A lens-and-grid-type schlieren system using a very large grid as a light source was described at earlier APS/DFD meetings. With a field-of-view of 2.3x2.9 m (7.5x9.5 feet), it is the largest indoor schlieren system in the world. Still and video examples of several full-scale airflows and heat-transfer problems visualized thus far will be shown. These include: heating and ventilation airflows, flows due to appliances and equipment, the thermal plumes of people, the aerodynamics of an explosive trace detection portal, gas leak detection, shock wave motion associated with aviation security problems, and heat transfer from live crops. Planned future projects include visualizing fume-hood and grocery display freezer airflows and studying the dispersion of insect repellent plumes at full scale.

Nonsingular rainbow universes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Awad, Adel; Ali, Ahmed Farag; Majumder, Barun, E-mail: aawad@zewailcity.edu.eg, E-mail: ahmed.ali@fsc.bu.edu.eg, E-mail: barunbasanta@iitgn.ac.in

2013-10-01

In this work, we study FRW cosmologies in the context of gravity rainbow. We discuss the general conditions for having a nonsingular FRW cosmology in gravity rainbow. We propose that gravity rainbow functions can be fixed using two known modified dispersion relation (MDR), which have been proposed in literature. The first MDR was introduced by Amelino-Camelia, et el. in [9] and the second was introduced by Magueijo and Smolin in [24]. Studying these FRW-like cosmologies, after fixing the gravity rainbow functions, leads to nonsingular solutions which can be expressed in exact forms.

Evidence of major genes affecting stress response in rainbow trout using Bayesian methods of complex segregation analysis

USDA-ARS?s Scientific Manuscript database

As a first step towards the genetic mapping of quantitative trait loci (QTL) affecting stress response variation in rainbow trout, we performed complex segregation analyses (CSA) fitting mixed inheritance models of plasma cortisol using Bayesian methods in large full-sib families of rainbow trout. ...

Impacts of Northern Pike on stocked Rainbow Trout in Pactola Reservoir, South Dakota

USGS Publications Warehouse

Scheibel, Natalie C.; Dembkowski, Daniel J.; Davis, Jacob L.; Chipps, Steven R.

2016-01-01

Establishment of nonnative Northern Pike Esox lucius in Pactola Reservoir, South Dakota, has prompted concern among biologists about the influence of this species on the lake’s intensively managed salmonid fisheries. Ancedotal information suggests that catch rates of Rainbow Trout Oncorhynchus mykiss have declined while mean size and abundance of Northern Pike has increased, although quantitative information on diet and growth of the Northern Pike population is lacking. To address potential interactions between Northern Pike and Rainbow Trout, we assessed size-dependent predation by Northern Pike on Rainbow Trout and determined the relative energetic contribution of stocked Rainbow Trout to Northern Pike growth using bioenergetics modeling. Stable isotopes combined with traditional diet analyses revealed that smaller Northern Pike (<600 mm TL) consumed primarily centrarchids and Rainbow Smelt Osmerus mordax, and Rainbow Trout contributed less than 10% to their annual energy consumption. In contrast, larger Northern Pike (≥600 mm TL) consumed primarily Rainbow Trout, which accounted for 56% of their annual energy consumption. Combining estimates of Northern Pike predation with production costs of catchable-size Rainbow Trout revealed that annual economic losses ranged from US$15,259 to $24,801 per year. Over its lifespan, an age-10 Northern Pike was estimated to consume ~117 Rainbow Trout worth approximately $340. Thus, Northern Pike predation substantially influences salmonid management initiatives and is likely a primary factor contributing to reduced Rainbow Trout abundance and return to anglers in Pactola Reservoir. Strategies for reducing Northern Pike predation on Rainbow Trout include increasing the size of stocked fish or altering the timing and spatial distribution of stocking events.

Background Oriented Schlieren (BOS) of a Supersonic Aircraft in Flight

NASA Technical Reports Server (NTRS)

Heineck, James T.; Banks, Daniel W.; Schairer, Edward T.; Haering, Edward A.; Bean, Paul S.

2016-01-01

This article describes the development and use of Background Oriented Schlieren on a full-scale supersonic jet in flight. A series of flight tests was performed in October, 2014 and February 2015 using the flora of the desert floor in the Supersonic Flight Corridor on the Edwards Air Force Base as a background. Flight planning was designed based on the camera resolution, the mean size and color of the predominant plants, and the navigation and coordination of two aircraft. Software used to process the image data was improved with additional utilities. The planning proved to be effective and the vast majority of the passes of the target aircraft were successfully recorded. Results were obtained that are the most detailed schlieren imagery of an aircraft in flight to date.

Schlieren-based temperature measurement inside the cylinder of an optical spark ignition and homogeneous charge compression ignition engine.

PubMed

Aleiferis, Pavlos; Charalambides, Alexandros; Hardalupas, Yannis; Soulopoulos, Nikolaos; Taylor, A M K P; Urata, Yunichi

2015-05-10

Schlieren [Schlieren and Shadowgraphy Techniques (McGraw-Hill, 2001); Optics of Flames (Butterworths, 1963)] is a non-intrusive technique that can be used to detect density variations in a medium, and thus, under constant pressure and mixture concentration conditions, measure whole-field temperature distributions. The objective of the current work was to design a schlieren system to measure line-of-sight (LOS)-averaged temperature distribution with the final aim to determine the temperature distribution inside the cylinder of internal combustion (IC) engines. In a preliminary step, we assess theoretically the errors arising from the data reduction used to determine temperature from a schlieren measurement and find that the total error, random and systematic, is less than 3% for typical conditions encountered in the present experiments. A Z-type, curved-mirror schlieren system was used to measure the temperature distribution from a hot air jet in an open air environment in order to evaluate the method. Using the Abel transform, the radial distribution of the temperature was reconstructed from the LOS measurements. There was good agreement in the peak temperature between the reconstructed schlieren and thermocouple measurements. Experiments were then conducted in a four-stroke, single-cylinder, optical spark ignition engine with a four-valve, pentroof-type cylinder head to measure the temperature distribution of the reaction zone of an iso-octane-air mixture. The engine optical windows were designed to produce parallel rays and allow accurate application of the technique. The feasibility of the method to measure temperature distributions in IC engines was evaluated with simulations of the deflection angle combined with equilibrium chemistry calculations that estimated the temperature of the reaction zone at the position of maximum ray deflection as recorded in a schlieren image. Further simulations showed that the effects of exhaust gas recirculation and air

The mineralogy and geochemistry of quartz-tourmaline schlieren in the granites of the Primorsky Complex, Western Baikal Region

NASA Astrophysics Data System (ADS)

Savel'eva, V. B.; Bazarova, E. P.; Kanakin, S. V.

2014-12-01

Quartz-tourmaline schlieren have been found within rapakivi-like granites of the Early Proterozoic Primorsky Complex in the Western Baikal Region. These rocks are biotite leucogranites with normal alkalinity (A/CNK = 1.00-1.04); a high iron mole fraction (92-95%); a K2O/Na2O value of about 2.0; relatively high F, Li, Rb, Cs, Sn, Pb, Th, and U contents; and low Ba, Sr, Eu, Zn, Sc, and V contents. The schlieren composed of quartz and tourmaline with relics of feldspar also contain fluorite, rare muscovite, chlorite, and accessory rutile, ilmenite, zircon, monazite, xenotime, and bastnäsite. B2O3 and F contents in the schlieren are 2.29-2.63 and 0.30-0.47 wt %, respectively. Fe2O3 (4.8-5.4 wt %), F, and H2O contents are higher in these schlieren than in the host granite, while SiO2, CaO, Na2O, K2O, and P2O5 contents are lower than in host rocks. K2O/Na2O values decrease in the schlieren down to 0.4. Enrichment of the schlieren in Fe and other ore elements (Zn, Co, Cu, Sn, etc.), together with B, F, H2O, and Na, suggests that they crystallized from fluid-saturated melt segregated from aluminosilicate melt in the apical part of a shallow-seated intrusion. The formation of tourmaline may be related to the interaction of the fluid with feldspars in the crystallizing granites; it was accompanied by a separation of fluid F-CO2. Quartz precipitated at the next stage, due to the acidic character of the aqueous fluid. In general, the relationships of minerals in the schlieren indicate distinct fractionation of LREE, HREE, and Y in the fluid-saturated melt.

Detonator Performance Characterization Using Multi-Frame Laser Schlieren Imaging

NASA Astrophysics Data System (ADS)

Clarke, S. A.; Landon, C. D.; Murphy, M. J.; Martinez, M. E.; Mason, T. A.; Thomas, K. A.

2009-12-01

Several experiments that are part of a phased plan to understand the evolution of detonation in a detonator from initiation shock through run to detonation to full detonation to transition to booster and booster detonation will be presented. High speed laser schlieren movies have been used to study several explosive initiation events, such as exploding bridgewires (EBW), exploding foil initiators (EFI) (or slappers), direct optical initiation (DOI), and electrostatic discharge (ESD). Additionally, a series of tests have been performed on "cut-back" detonators with varying initial pressing (IP) heights. We have also used this diagnostic to visualize a range of EBW, EFI, and DOI full-up detonators. Future applications to other explosive events such as boosters and IHE booster evaluation will be discussed. The EPIC hydrodynamic code has been used to analyze the shock fronts from the schlieren images to reverse calculate likely boundary or initial conditions to determine the temporal-spatial pressure profile across the output face of the detonator. LA-UR-05099

Application of bacteriorhodopsin films in an adaptive-focusing schlieren system

NASA Astrophysics Data System (ADS)

Downie, John D.

1995-09-01

The photochromic property of bacteriorhodopsin films is exploited in the application of a focusing schlieren optical system for the visualization of optical phase information. By encoding an image on the film with light of one wavelength and reading out with a different wavelength, the readout beam can effectively see the photographic negative of the original image. The potential advantage of this system over previous focusing schlieren systems is that the updatable nature of the bacteriorhodopsin film allows system adaptation. I discuss two image encoding and readout techniques for the bacteriorhodopsin and use film transmission characteristics to choose the more appropriate method. I demonstrate the system principle with experimental results using argon-ion and He-Cd lasers as the two light sources of different wavelengths, and I discuss current limitations to implementation with a white-light source.

Application of Bacteriorhodopsin Films in an Adaptive-Focusing Schlieren System

NASA Technical Reports Server (NTRS)

Downie, John D.

1995-01-01

The photochromic property of bacteriorhodopsin films is exploited in the application of a focusing schlieren optical system for the visualization of optical phase information. By encoding an image on the film with light of one wavelength and reading out with a different wavelength, the readout beam can effectively see the photographic negative of the original image. The potential advantage of this system over previous focusing schlieren systems is that the updatable nature of the bacteriorhodopsin film allows system adaptation. I discuss two image encoding and readout techniques for the bacteriorhodopsin and use film transmission characteristics to choose the more appropriate method. I demonstrate the system principle with experimental results using argon-ion and He-Cd lasers as the two light sources of different wavelengths, and I discuss current limitations to implementation with a white-light source.

Detection of quantitative trait loci affecting response to crowding stress in rainbow trout

USDA-ARS?s Scientific Manuscript database

Aquaculture environmental stressors such as handling, overcrowding, sub-optimal water quality parameters and social interactions negatively impact growth, feed intake, feed efficiency, disease resistance, flesh quality and reproductive performance in rainbow trout. To identify QTL affecting response...

Classification of Rainbows

NASA Astrophysics Data System (ADS)

Ricard, J. L.; Peter, A. L.; Barckicke, J.

2015-12-01

CLASSIFICATION OF RAINBOWS Jean Louis Ricard,1,2,* Peter Adams ,2 and Jean Barckicke 2,3 1CNRM, Météo-France,42 Avenue Gaspard Coriolis, 31057 Toulouse, France 2CEPAL, 148 Himley Road, Dudley, West Midlands DY1 2QH, United Kingdom 3DP/Compas,Météo-France,42 Avenue Gaspard Coriolis, 31057 Toulouse, France *Corresponding author: Dr_Jean_Ricard@yahoo,co,ukRainbows are the most beautiful and most spectacular optical atmospheric phenomenon. Humphreys (1964) pointedly noted that "the "explanations" generally given of the rainbow [ in textbooks] may well be said to explain beautifully that which does not occur, and to leave unexplained which does" . . . "The records of close observations of rainbows soon show that not even the colors are always the same". Textbooks stress that the main factor affecting the aspect of the rainbow is the radius of the water droplets. In his well-known textbook entitled "the nature of light & colour in the open air", Minnaert (1954) gives the chief features of the rainbow depending on the diameter of the drops producing it. For this study, we have gathered hundreds of pictures of primary bows. We sort out the pictures into classes. The classes are defined in a such way that rainbows belonging to the same class look similar. Our results are surprising and do not confirm Minnaert's classification. In practice, the size of the water droplets is only a minor factor controlling the overall aspect of the rainbow. The main factor appears to be the height of the sun above the horizon. At sunset, the width of the red band increases, while the width of the other bands of colours decreases. The orange, the violet, the blue and the green bands disappear completely in this order. At the end, the primary bow is mainly red and slightly yellow. Picture = Contrast-enhanced photograph of a primary bow picture (prepared by Andrew Dunn).

Rainbow Fourier Transform

NASA Technical Reports Server (NTRS)

Alexandrov, Mikhail D.; Cairns, Brian; Mishchenko, Michael I.

2012-01-01

We present a novel technique for remote sensing of cloud droplet size distributions. Polarized reflectances in the scattering angle range between 135deg and 165deg exhibit a sharply defined rainbow structure, the shape of which is determined mostly by single scattering properties of cloud particles, and therefore, can be modeled using the Mie theory. Fitting the observed rainbow with such a model (computed for a parameterized family of particle size distributions) has been used for cloud droplet size retrievals. We discovered that the relationship between the rainbow structures and the corresponding particle size distributions is deeper than it had been commonly understood. In fact, the Mie theory-derived polarized reflectance as a function of reduced scattering angle (in the rainbow angular range) and the (monodisperse) particle radius appears to be a proxy to a kernel of an integral transform (similar to the sine Fourier transform on the positive semi-axis). This approach, called the rainbow Fourier transform (RFT), allows us to accurately retrieve the shape of the droplet size distribution by the application of the corresponding inverse transform to the observed polarized rainbow. While the basis functions of the proxy-transform are not exactly orthogonal in the finite angular range, this procedure needs to be complemented by a simple regression technique, which removes the retrieval artifacts. This non-parametric approach does not require any a priori knowledge of the droplet size distribution functional shape and is computationally fast (no look-up tables, no fitting, computations are the same as for the forward modeling).

High-speed schlieren videography of vortex-ring impact on a wall

NASA Astrophysics Data System (ADS)

Kissner, Benjamin; Hargather, Michael; Settles, Gary

2011-11-01

Ring vortices of approximately 20 cm diameter are generated through the use of an Airzooka toy. To make the vortex visible, it is seeded with difluoroethane gas, producing a refractive-index difference with the air. A 1-meter-diameter, single-mirror, double-pass schlieren system is used to visualize the ring-vortex motion, and also to provide the wall with which the vortex collides. High-speed imaging is provided by a Photron SA-1 digital video camera. The Airzooka is fired toward the mirror almost along the optical axis of the schlieren system, so that the view of the vortex-mirror collision is normal to the path of vortex motion. Vortex-wall interactions similar to those first observed by Walker et al. (JFM 181, 1987) are recorded at high speed. The presentation will consist of a screening and discussion of these video results.

Ground-to-air flow visualization using Solar Calcium-K line Background-Oriented Schlieren

NASA Astrophysics Data System (ADS)

Hill, Michael A.; Haering, Edward A.

2017-01-01

The Calcium-K Eclipse Background-Oriented Schlieren experiment was performed as a proof of concept test to evaluate the effectiveness of using the solar disk as a background to perform the Background-Oriented Schlieren (BOS) method of flow visualization. A ground-based imaging system was equipped with a Calcium-K line optical etalon filter to enable the use of the chromosphere of the sun as the irregular background to be used for BOS. A US Air Force T-38 aircraft performed three supersonic runs which eclipsed the sun as viewed from the imaging system. The images were successfully post-processed using optical flow methods to qualitatively reveal the density gradients in the flow around the aircraft.

Flow Visualization of Aircraft in Flight by Means of Background Oriented Schlieren Using Celestial Objects

NASA Technical Reports Server (NTRS)

Hill, Michael A.; Haering, Edward A., Jr.

2017-01-01

The Background Oriented Schlieren using Celestial Objects series of flights was undertaken in the spring of 2016 at National Aeronautics and Space Administration Armstrong Flight Research Center to further develop and improve a flow visualization technique which can be performed from the ground upon flying aircraft. Improved hardware and imaging techniques from previous schlieren tests were investigated. A United States Air Force T-38C and NASA B200 King Air aircraft were imaged eclipsing the sun at ranges varying from 2 to 6 nautical miles, at subsonic and supersonic speeds.

Compact field color schlieren system for use in microgravity materials processing

NASA Technical Reports Server (NTRS)

Poteet, W. M.; Owen, R. B.

1986-01-01

A compact color schlieren system designed for field measurement of materials processing parameters has been built and tested in a microgravity environment. Improvements in the color filter design and a compact optical arrangement allowed the system described here to retain the traditional advantages of schlieren, such as simplicity, sensitivity, and ease of data interpretation. Testing was accomplished by successfully flying the instrument on a series of parabolic trajectories on the NASA KC-135 microgravity simulation aircraft. A variety of samples of interest in materials processing were examined. Although the present system was designed for aircraft use, the technique is well suited to space flight experimentation. A major goal of this effort was to accommodate the main optical system within a volume approximately equal to that of a Space Shuttle middeck locker. Future plans include the development of an automated space-qualified facility for use on the Shuttle and Space Station.

Rainbow holography and its applications

NASA Astrophysics Data System (ADS)

Vlasov, N. G.; Ivanov, Vladimir S.

1993-09-01

The general equations of the rainbow holography are deduced. Their analysis makes it possible to offer different methods of the rainbow holographic images production. A new way of using the rainbow holograms as optical elements for effective color illuminating of transparent, specular, and polished objects is proposed. Application fields are the advertising industry, shop windows design, etc.

Use of schlieren methods to study gas flow in laser technology

NASA Astrophysics Data System (ADS)

Mrňa, Libor; Pavelka, Jan; Horník, Petr; Hrabovský, Jozef

2016-11-01

Laser technologies such as welding and cutting rely on process gases. We suggest to use schlieren imaging to visualize the gas flow during these processes. During the process of laser welding, the shielding gas flows to the welded area to prevent oxidation of the weld pool by surrounding air. The gas also interacts with hot plasma spurting from the key hole induced by the laser beam incident on the molten material. This interaction is quite complicated because hot plasma mixes with the cold shielding gas while the system is moving along the weld. Three shielding gases were used in the presented experiment: Ar, He and N2. Differences in dynamics of the flow are clearly visible on schlieren images. Moreover, high speed recording reveals a structure consisting of hot gas bubbles. We were also able to determine the velocity of the bubbles from the recording. During laser cutting, the process gas flows coaxially with the laser beam from the nozzle to remove the molten material out of the kerf. The gas flow is critical for the quality of the resulting edge of the cut. Schlieren method was used to study gas flow under the nozzle and then under the material being cut. This actually creates another slot nozzle. Due to the very low speed of flow below the material the schleiren method is already at the limit of its sensitivity. Therefore, it is necessary to apply a differential technique to increase the contrast. Distinctive widening of the flow shaped by the kerf was observed.

Black hole complementarity in gravity's rainbow

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gim, Yongwan; Kim, Wontae, E-mail: yongwan89@sogang.ac.kr, E-mail: wtkim@sogang.ac.kr

2015-05-01

To see how the gravity's rainbow works for black hole complementary, we evaluate the required energy for duplication of information in the context of black hole complementarity by calculating the critical value of the rainbow parameter in the certain class of the rainbow Schwarzschild black hole. The resultant energy can be written as the well-defined limit for the vanishing rainbow parameter which characterizes the deformation of the relativistic dispersion relation in the freely falling frame. It shows that the duplication of information in quantum mechanics could not be allowed below a certain critical value of the rainbow parameter; however, itmore » might be possible above the critical value of the rainbow parameter, so that the consistent formulation in our model requires additional constraints or any other resolutions for the latter case.« less

What Causes Rainbows?

ERIC Educational Resources Information Center

Beck, John

2004-01-01

If one looks at a rain cloud with the Sun behind one's back, the sunlight and water drops may interact just right, revealing the familiar arc of red, orange, yellow, green, blue, indigo, and violet. Many of people have been pleasantly surprised to see a rainbow in the sky, but probably have not considered why they occur. Rainbows are caused by…

Application Focused Schlieren to Nozzle Ejector Flowfields

NASA Technical Reports Server (NTRS)

Mitchell, L. Kerry; Ponton, Michael K.; Seiner, John M.; Manning, James C.; Jansen, Bernard J.; Lagen, Nicholas T.

1999-01-01

The motivation of the testing was to reduce noise generated by eddy Mach wave emission via enhanced mixing in the jet plume. This was to be accomplished through the use of an ejector shroud, which would bring in cooler ambient fluid to mix with the hotter jet flow. In addition, the contour of the mixer, with its chutes and lobes, would accentuate the merging of the outer and inner flows. The objective of the focused schlieren work was to characterize the mixing performance inside of the ejector. Using flow visualization allowed this to be accomplished in a non-intrusive manner.

The rainbow: from ancient Greece to modern optics.

PubMed

Schwab, Ivan R; Lee, W Barry; Bisno, David

2009-01-01

We provide a historical perspective on the rainbow, with a review of early research and observations regarding the rainbow's origin and a discussion of some of the major contributors to our current understanding of what the rainbow represents. An overview of the various types of rainbows is undertaken. We conclude with a discussion of the rainbow's link to refraction, light, the visual system, and perception.

The rainbow in the box

NASA Astrophysics Data System (ADS)

Selmke, Markus; Selmke, Sarah

2018-04-01

We describe a three-dimensional (3D) rainbow demonstration experiment. Its key idea is to convey a particular aspect of the natural phenomenon, namely, the origin of the perceived rainbow being multiple individual glints from within a rainshower. Raindrops in this demonstration are represented by acrylic spheres arranged on pillars within a cubic volume. Defocused imaging with a camera or the eye reveals a mosaic rainbow (segment) when viewed and illuminated in the appropriate fashion.

A Computational Model of the Rainbow Trout Hypothalamus-Pituitary-Ovary-Liver Axis

PubMed Central

Gillies, Kendall; Krone, Stephen M.; Nagler, James J.; Schultz, Irvin R.

2016-01-01

Reproduction in fishes and other vertebrates represents the timely coordination of many endocrine factors that culminate in the production of mature, viable gametes. In recent years there has been rapid growth in understanding fish reproductive biology, which has been motivated in part by recognition of the potential effects that climate change, habitat destruction and contaminant exposure can have on natural and cultured fish populations. New approaches to understanding the impacts of these stressors are being developed that require a systems biology approach with more biologically accurate and detailed mathematical models. We have developed a multi-scale mathematical model of the female rainbow trout hypothalamus-pituitary-ovary-liver axis to use as a tool to help understand the functioning of the system and for extrapolation of laboratory findings of stressor impacts on specific components of the axis. The model describes the essential endocrine components of the female rainbow trout reproductive axis. The model also describes the stage specific growth of maturing oocytes within the ovary and permits the presence of sub-populations of oocytes at different stages of development. Model formulation and parametrization was largely based on previously published in vivo and in vitro data in rainbow trout and new data on the synthesis of gonadotropins in the pituitary. Model predictions were validated against several previously published data sets for annual changes in gonadotropins and estradiol in rainbow trout. Estimates of select model parameters can be obtained from in vitro assays using either quantitative (direct estimation of rate constants) or qualitative (relative change from control values) approaches. This is an important aspect of mathematical models as in vitro, cell-based assays are expected to provide the bulk of experimental data for future risk assessments and will require quantitative physiological models to extrapolate across biological scales. PMID

A Computational Model of the Rainbow Trout Hypothalamus-Pituitary-Ovary-Liver Axis.

PubMed

Gillies, Kendall; Krone, Stephen M; Nagler, James J; Schultz, Irvin R

2016-04-01

Reproduction in fishes and other vertebrates represents the timely coordination of many endocrine factors that culminate in the production of mature, viable gametes. In recent years there has been rapid growth in understanding fish reproductive biology, which has been motivated in part by recognition of the potential effects that climate change, habitat destruction and contaminant exposure can have on natural and cultured fish populations. New approaches to understanding the impacts of these stressors are being developed that require a systems biology approach with more biologically accurate and detailed mathematical models. We have developed a multi-scale mathematical model of the female rainbow trout hypothalamus-pituitary-ovary-liver axis to use as a tool to help understand the functioning of the system and for extrapolation of laboratory findings of stressor impacts on specific components of the axis. The model describes the essential endocrine components of the female rainbow trout reproductive axis. The model also describes the stage specific growth of maturing oocytes within the ovary and permits the presence of sub-populations of oocytes at different stages of development. Model formulation and parametrization was largely based on previously published in vivo and in vitro data in rainbow trout and new data on the synthesis of gonadotropins in the pituitary. Model predictions were validated against several previously published data sets for annual changes in gonadotropins and estradiol in rainbow trout. Estimates of select model parameters can be obtained from in vitro assays using either quantitative (direct estimation of rate constants) or qualitative (relative change from control values) approaches. This is an important aspect of mathematical models as in vitro, cell-based assays are expected to provide the bulk of experimental data for future risk assessments and will require quantitative physiological models to extrapolate across biological scales.

Layering transitions and Schlieren textures in Langmuir films of two organic radicals.

PubMed

Gallani, J-L; Bourgogne, C; Nakatsuji, S

2004-11-09

Two paramagnetic radicals have been investigated in terms of their film-forming properties at the air-water interface. Although the radicals failed to display any mesomorphic behavior in the bulk, they were found prone to built-up multilayer films on the Langmuir trough. The molecules seem to dimerize in the upper layers of the films that exhibit striking Schlieren textures when observed with Brewster angle microscopy. These Schlieren textures, together with the ability to form multilayers, indicate that the molecules came close to displaying smectic mesomorphism. A tentative model of the layers' structure is proposed, and a suggestion for synthesizing new molecules with actual mesomorphism is offered. The presented results show that the study of the behavior of molecules at the air-water interface can shed a new light on their behavior in the bulk and help in the design of new magnetic mesogens.

Identification of genes involved in cold-shock response in rainbow trout (Oncorhynchus mykiss).

PubMed

Borchel, Andreas; Verleih, Marieke; Rebl, Alexander; Goldammer, Tom

2017-09-01

A rapid decline in temperature poses a major challenge for poikilothermic fish, as their entire metabolism depends on ambient temperature. The gene expression of rainbow trout Oncorhynchus mykiss having undergone such a cold shock (0◦C) was compared to a control (5◦C) in a microarray and quantitative real-time PCR based study. The tissues of gill, kidney and liver were examined. The most differently expressed genes were found in liver, many of them contributing to the network 'cellular compromise, cellular growth and proliferation'.However, the number of genes found to be regulated at 0◦Cwas surprisingly low. Instead of classical genes involved in temperature shock, the three genes encoding fibroblast growth factor 1 (fgf1), growth arrest and DNA-damageinducible, alpha (gadd45a) and sclerostin domain-containing protein 1 (sostdc1) were upregulated in the liver upon cold shock in two different rainbow trout strains, suggesting that these genes may be considered as general biomarkers for cold shock in rainbow trout.

Identification of single nucleotide polymorphism markers associated with cortisol response to crowding in Rainbow Trout

USDA-ARS?s Scientific Manuscript database

Understanding stress responses is essential for improving animal welfare and increasing agriculture production efficiency. Previously, we reported microsatellite markers associated with quantitative trait loci (QTL) affecting plasma cortisol response to crowding in rainbow trout. Our main objectives...

Phase rainbow refractometry for accurate droplet variation characterization.

PubMed

Wu, Yingchun; Promvongsa, Jantarat; Saengkaew, Sawitree; Wu, Xuecheng; Chen, Jia; Gréhan, Gérard

2016-10-15

We developed a one-dimensional phase rainbow refractometer for the accurate trans-dimensional measurements of droplet size on the micrometer scale as well as the tiny droplet diameter variations at the nanoscale. The dependence of the phase shift of the rainbow ripple structures on the droplet variations is revealed. The phase-shifting rainbow image is recorded by a telecentric one-dimensional rainbow imaging system. Experiments on the evaporating monodispersed droplet stream show that the phase rainbow refractometer can measure the tiny droplet diameter changes down to tens of nanometers. This one-dimensional phase rainbow refractometer is capable of measuring the droplet refractive index and diameter, as well as variations.

Ultrasonic Waves in Water Visualized With Schlieren Imaging

NASA Technical Reports Server (NTRS)

Juergens, Jeffrey R.

2000-01-01

The Acoustic Liquid Manipulation project at the NASA Glenn Research Center at Lewis Field is working with high-intensity ultrasound waves to produce acoustic radiation pressure and acoustic streaming. These effects can be used to propel liquid flows to manipulate floating objects and liquid surfaces. Interest in acoustic liquid manipulation has been shown in acoustically enhanced circuit board electroplating, microelectromechanical systems (MEMS), and microgravity space experiments. The current areas of work on this project include phased-array ultrasonic beam steering, acoustic intensity measurements, and schlieren imaging of the ultrasonic waves.

The Rainbow Spectrum of RNA Secondary Structures.

PubMed

Li, Thomas J X; Reidys, Christian M

2018-06-01

In this paper, we analyze the length spectrum of rainbows in RNA secondary structures. A rainbow in a secondary structure is a maximal arc with respect to the partial order induced by nesting. We show that there is a significant gap in this length spectrum. We shall prove that there asymptotically almost surely exists a unique longest rainbow of length at least [Formula: see text] and that with high probability any other rainbow has finite length. We show that the distribution of the length of the longest rainbow converges to a discrete limit law and that, for finite k, the distribution of rainbows of length k becomes for large n a negative binomial distribution. We then put the results of this paper into context, comparing the analytical results with those observed in RNA minimum free energy structures, biological RNA structures and relate our findings to the sparsification of folding algorithms.

An improved schlieren method for measurement and automatic reconstruction of the far-field focal spot

PubMed Central

Wang, Zhengzhou; Hu, Bingliang; Yin, Qinye

2017-01-01

The schlieren method of measuring far-field focal spots offers many advantages at the Shenguang III laser facility such as low cost and automatic laser-path collimation. However, current methods of far-field focal spot measurement often suffer from low precision and efficiency when the final focal spot is merged manually, thereby reducing the accuracy of reconstruction. In this paper, we introduce an improved schlieren method to construct the high dynamic-range image of far-field focal spots and improve the reconstruction accuracy and efficiency. First, a detection method based on weak light beam sampling and magnification imaging was designed; images of the main and side lobes of the focused laser irradiance in the far field were obtained using two scientific CCD cameras. Second, using a self-correlation template matching algorithm, a circle the same size as the schlieren ball was dug from the main lobe cutting image and used to change the relative region of the main lobe cutting image within a 100×100 pixel region. The position that had the largest correlation coefficient between the side lobe cutting image and the main lobe cutting image when a circle was dug was identified as the best matching point. Finally, the least squares method was used to fit the center of the side lobe schlieren small ball, and the error was less than 1 pixel. The experimental results show that this method enables the accurate, high-dynamic-range measurement of a far-field focal spot and automatic image reconstruction. Because the best matching point is obtained through image processing rather than traditional reconstruction methods based on manual splicing, this method is less sensitive to the efficiency of focal-spot reconstruction and thus offers better experimental precision. PMID:28207758

Thin-shell wormholes in rainbow gravity

NASA Astrophysics Data System (ADS)

Amirabi, Z.; Halilsoy, M.; Mazharimousavi, S. Habib

2018-03-01

At the Planck scale of length ˜10‑35 m where the energy is comparable with the Planck energy, the quantum gravity corrections to the classical background spacetime results in gravity’s rainbow or rainbow gravity. In this modified theory of gravity, geometry depends on the energy of the test particle used to probe the spacetime, such that in the low energy limit, it yields the standard general relativity. In this work, we study the thin-shell wormholes in the spherically symmetric rainbow gravity. We find the corresponding properties in terms of the rainbow functions which are essential in the rainbow gravity and the stability of such thin-shell wormholes are investigated. Particularly, it will be shown that there are exact solutions in which high energy particles crossing the throat will encounter less amount of total exotic matter. This may be used as an advantage over general relativity to reduce the amount of exotic matter.

Rainbow Rindler metric and Unruh effect

NASA Astrophysics Data System (ADS)

Yadav, Gaurav; Komal, Baby; Majhi, Bibhas Ranjan

2017-11-01

The energy of a particle moving on a space-time, in principle, can affect the background metric. The modifications to it depend on the ratio of energy of the particle and the Planck energy, known as rainbow gravity. Here, we find the explicit expressions for the coordinate transformations from rainbow Minkowski space-time to accelerated frame. The corresponding metric is also obtained which we call as rainbow Rindler metric. So far we are aware of that no body has done it in a concrete manner. Here, this is found from the first principle and hence all the parameters are properly identified. The advantage of this is that the calculated Unruh temperature is compatible with the Hawking temperature of the rainbow black hole horizon, obtained earlier. Since the accelerated frame has several importance in revealing various properties of gravity, we believe that the present result will not only fill that gap, but also help to explore different aspects of rainbow gravity paradigm.

Orbiting Rainbows Simulation

NASA Image and Video Library

2015-04-22

This simulated image shows how a cloud of glitter in geostationary orbit would be illuminated and controlled by two laser beams. As the cloud orbits Earth, grains scatter the sun's light at different angles like many tiny prisms, similar to how rainbows are produced from light being dispersed by water droplets. That is why the project concept is called "Orbiting Rainbows." The cloud functions like a reflective surface, allowing the exoplanet (displayed in the bottom right) to be imaged. The orbit path is shown in the top right. On the bottom left, Earth's image is seen behind the cloud. To image an exoplanet, the cloud would need to have a diameter of nearly 98 feet (30 meters). This simulation confines the cloud to a 3.3 x 3.3 x 3.3 foot volume (1 x 1 x 1 meter volume) to simplify the computations. The elements of the orbiting telescope are not to scale. Orbiting Rainbows is currently in Phase II development through the NASA Innovative Advanced Concepts (NIAC) Program. It was one of five technology proposals chosen for continued study in 2014. In the current phase, Orbiting Rainbows researchers are conducting small-scale ground experiments to demonstrate how granular materials can be manipulated using lasers and simulations of how the imaging system would behave in orbit. http://photojournal.jpl.nasa.gov/catalog/PIA19318

Background-Oriented Schlieren Applications in NASA Glenn Research Center's Ground Test Facilities

NASA Technical Reports Server (NTRS)

Clem, Michelle M.; Woike, Mark R.

2015-01-01

This is a presentation for an invited session at the 2015 SciTech Conference 53rd AIAA Aerospace Sciences Meeting. The presentation covers the recent applications of Background-Oriented Schlieren in NASA Glenn Research Center's ground test facilities, such as the 8x6 SWT, open jet rig, and AAPL.

Design for Double Rainbow

ERIC Educational Resources Information Center

Thomas, Lisa Carlucci

2011-01-01

Rare is the inspirational, spontaneous, transformative moment shared among 20 million people. In the summer of 2010, people around the world were moved by the sighting of a double rainbow--almost a triple rainbow--"all the way across the sky" in Yosemite National Park. Caught on video and posted to by YouTube by Paul Vasquez in January 2010, the…

Rainbows, supernumerary rainbows and interference effects in the angular scattering of chemical reactions: an investigation using Heisenberg's S matrix programme.

PubMed

Shan, Xiao; Xiahou, Chengkui; Connor, J N L

2018-01-03

In earlier research, we have demonstrated that broad "hidden" rainbows can occur in the product differential cross sections (DCSs) of state-to-state chemical reactions. Here we ask the question: can pronounced and localized rainbows, rather than broad hidden ones, occur in reactive DCSs? Further motivation comes from recent measurements by H. Pan and K. Liu, J. Phys. Chem. A, 2016, 120, 6712, of a "bulge" in a reactive DCS, which they conjecture is a rainbow. Our theoretical approach uses a "weak" version of Heisenberg's scattering matrix program (wHSMP) introduced by X. Shan and J. N. L. Connor, Phys. Chem. Chem. Phys., 2011, 13, 8392. This wHSMP uses four general physical principles for chemical reactions to suggest simple parameterized forms for the S matrix; it does not employ a potential energy surface. We use a parameterization in which the modulus of the S matrix is a smooth-step function of the total angular momentum quantum number, J, and (importantly) its phase is a cubic polynomial in J. We demonstrate for a Legendre partial wave series (PWS) the existence of pronounced rainbows, supernumerary rainbows, and other interference effects, in reactive DCSs. We find that reactive rainbows can be more complicated in their structure than the familiar rainbows of elastic scattering. We also analyse the angular scattering using Nearside-Farside (NF) PWS theory and NF PWS Local Angular Momentum (LAM) theory, including resummations of the PWS. In addition, we apply full and NF asymptotic (semiclassical) rainbow theories to the PWS - in particular, the uniform Airy and transitional Airy approximations for the farside scattering. This lets us prove that structure in the DCSs are indeed rainbows, supernumerary rainbows as well as other interference effects.

A New Way to Demonstrate the Rainbow

ERIC Educational Resources Information Center

Ivanov, Dragia Trifonov; Nikolov, Stefan Nikolaev

2016-01-01

The rainbow is a beautiful optical phenomenon that has fascinated humankind since antiquity. It is caused by a huge number of water droplets in the atmosphere illuminated by the Sun. Many noted physicists have contributed to the explanation of the rainbow. The wave theory of the rainbow was developed by George Airy, and modern descriptions are…

Schlieren, Phase-Contrast, and Spectroscopy Diagnostics for the LBNL HIF Plasma Channel Experiment

NASA Astrophysics Data System (ADS)

Ponce, D. M.; Niemann, C.; Fessenden, T. J.; Leemans, W.; Vandersloot, K.; Dahlbacka, G.; Yu, S. S.; Sharp, W. M.; Tauschwitz, A.

1999-11-01

The LBNL Plasma Channel experiment has demonstrated stable 42-cm Z-pinch discharge plasma channels with peak currents in excess of 50 kA for a 7 torr nitrogen, 30 kV discharge. These channels offer the possibility of transporting heavy-ion beams for inertial fusion. We postulate that the stability of these channels resides in the existance of a neutral-gas density depresion created by a pre-pulse discharge before the main capacitor bank discharge is created. Here, we present the results and experimental diagnostics setup used for the study of the pre-pulse and main bank channels. Observation of both the plasma and neutral gas dynamics is achieved. Schlieren, Zernike's phase-contrast, and spectroscopic techniques are used. Preliminary Schlieren results show a gas shockwave moving radially at a rate of ≈ 10^6 mm/sec as a result of the fast and localized deposited energy during the evolution of the pre-pulse channel. This data will be used to validate simulation codes (BUCKY and CYCLOPS).

Focused Schlieren flow visualization studies of multiple venturi fuel injectors in a high pressure combustor

NASA Technical Reports Server (NTRS)

Chun, K. S.; Locke, R. J.; Lee, C. M.; Ratvasky, W. J.

1994-01-01

Multiple venturi fuel injectors were used to obtain uniform fuel distributions, better atomization and vaporization in the premixing/prevaporizing section of a lean premixed/prevaporized flame tube combustor. A focused Schlieren system was used to investigate the fuel/air mixing effectiveness of various fuel injection configurations. The Schlieren system was focused to a plane within the flow field of a test section equipped with optical windows. The focused image plane was parallel to the axial direction of the flow and normal to the optical axis. Images from that focused plane, formed by refracted light due to density gradients within the flow field, were filmed with a high-speed movie camera at framing rates of 8,000 frames per second (fps). Three fuel injection concepts were investigated by taking high-speed movies of the mixture flows at various operating conditions. The inlet air temperature was varied from 600 F to 1000 F, and inlet pressures from 80 psia to 150 psia. Jet-A fuel was used typically at an equivalence ratio of 0.5. The intensity variations of the digitized Schlieren images were analytically correlated to spatial density gradients of the mixture flows. Qualitative measurements for degree of mixedness, intensity of mixing, and mixing completion time are shown. Various mixing performance patterns are presented with different configurations of fuel injection points and operating conditions.

Fate of Tetracapsuloides bryosalmonae (Myxozoa) after infection of brown trout Salmo trutta and rainbow trout Oncorhynchus mykiss.

PubMed

Kumar, Gokhlesh; Abd-Elfattah, Ahmed; Saleh, Mona; El-Matbouli, Mansour

2013-11-25

Tetracapsuloides bryosalmonae (Myxozoa) is the causative agent of proliferative kidney disease in salmonids. We assessed differences in intensity of T. bryosalmonae infection between brown trout Salmo trutta and rainbow trout Oncorhynchus mykiss from the clinical phase of infection onwards. Specific pathogen-free fish were exposed to T. bryosalmonae spores under controlled laboratory conditions and sampled at 6, 8, 10, 12, 14, and 17 wk post exposure (wpe), and the transmission of T. bryosalmonae from infected fish to the bryozoan Fredericella sultana was observed. Parasite load was determined in fish kidneys by quantitative real-time PCR (qRT-PCR), and parasite stages were detected in kidney, liver, and spleen tissues at different time points by immunohistochemistry. T. bryosalmonae was successfully transmitted from infected brown trout to F. sultana colonies but not from infected rainbow trout. Body length and weight of infected brown trout did not differ significantly from control brown trout during all time points, while length and weight of infected rainbow trout differed significantly compared to controls from 10 to 17 wpe. qRT-PCR revealed that parasite load was significantly higher in kidneys of brown trout compared with rainbow trout. Immunohistochemistry showed high numbers of intra-luminal stages (sporogonic stages) in kidneys of brown trout with low numbers of pre-sporogonic stages. Sporogonic stages were not seen in kidneys of rainbow trout; only high numbers of pre-sporogonic stages were detected. Numbers of pre-sporogonic stages were low in the spleen and liver of brown trout but high in rainbow trout. These data confirmed that there are differences in the development and infection progress of T. bryosalmonae between brown trout and rainbow trout.

Fate of Tetracapsuloides bryosalmonae (Myxozoa) after infection of brown trout Salmo trutta and rainbow trout Oncorhynchus mykiss

PubMed Central

Kumar, Gokhlesh; Abd-Elfattah, Ahmed; Saleh, Mona; El-Matbouli, Mansour

2014-01-01

Tetracapsuloides bryosalmonae (Myxozoa) is the causative agent of proliferative kidney disease in salmonids. We assessed differences in intensity of T. bryosalmonae infection between brown trout Salmo trutta and rainbow trout Oncorhynchus mykiss from the clinical phase of infection onwards. Specific pathogen-free fish were exposed to T. bryosalmonae spores under controlled laboratory conditions and sampled at 6, 8, 10, 12, 14, and 17 wk post exposure (wpe), and the transmission of T. bryosalmonae from infected fish to the bryozoan Fredericella sultana was observed. Parasite load was determined in fish kidneys by quantitative real-time PCR (qRT-PCR), and parasite stages were detected in kidney, liver, and spleen tissues at different time points by immunohistochemistry. T. bryosalmonae was successfully transmitted from infected brown trout to F. sultana colonies but not from infected rainbow trout. Body length and weight of infected brown trout did not differ significantly from control brown trout during all time points, while length and weight of infected rainbow trout differed significantly compared to controls from 10 to 17 wpe. qRT-PCR revealed that parasite load was significantly higher in kidneys of brown trout compared with rainbow trout. Immunohistochemistry showed high numbers of intra-luminal stages (sporogonic stages) in kidneys of brown trout with low numbers of pre-sporogonic stages. Sporogonic stages were not seen in kidneys of rainbow trout; only high numbers of pre-sporogonic stages were detected. Numbers of pre-sporogonic stages were low in the spleen and liver of brown trout but high in rainbow trout. These data confirmed that there are differences in the development and infection progress of T. bryosalmonae between brown trout and rainbow trout. PMID:24270019

Thermodynamics of BTZ black holes in gravity’s rainbow

NASA Astrophysics Data System (ADS)

Alsaleh, Salwa

2017-05-01

In this paper, we deform the thermodynamics of a BTZ black hole from rainbow functions in gravity’s rainbow. The rainbow functions will be motivated from the results in loop quantum gravity and noncommutative geometry. It will be observed that the thermodynamics gets deformed due to these rainbow functions, indicating the existence of a remnant. However, the Gibbs free energy does not get deformed due to these rainbow functions, and so the critical behavior from Gibbs does not change by this deformation. This is because the deformation in the entropy cancels out the temperature deformation.

Perspective on rainbow-ladder truncation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Eichmann, G.; Institut fuer Physik, Karl-Franzens-Universitaet Graz, A-8010 Graz; Alkofer, R.

2008-04-15

Prima facie the systematic implementation of corrections to the rainbow-ladder truncation of QCD's Dyson-Schwinger equations will uniformly reduce in magnitude those calculated mass-dimensioned results for pseudoscalar and vector meson properties that are not tightly constrained by symmetries. The aim and interpretation of studies employing rainbow-ladder truncation are reconsidered in this light.

Perspective on rainbow-ladder truncation

NASA Astrophysics Data System (ADS)

Eichmann, G.; Alkofer, R.; Cloët, I. C.; Krassnigg, A.; Roberts, C. D.

2008-04-01

Prima facie the systematic implementation of corrections to the rainbow-ladder truncation of QCD's Dyson-Schwinger equations will uniformly reduce in magnitude those calculated mass-dimensioned results for pseudoscalar and vector meson properties that are not tightly constrained by symmetries. The aim and interpretation of studies employing rainbow-ladder truncation are reconsidered in this light.

Knocking Combustion Observed in a Spark-Ignition Engine with Simultaneous Direct and Schlieren High-Speed Motion Pictures and Pressure Records

NASA Technical Reports Server (NTRS)

Osterstrom, Gordon E

1948-01-01

Simultaneous direct and Schlieren photographs at 40,000 frames per second and correlated pressure records were taken of knocking combustion in a special spark-ignition engine to ascertain the intensity of certain end-zone reactions previously noted from Schlieren photography alone. A violent propagated homogeneous autoignition, or a similar phenomenon, previously observed, was again observed. The pressure records show autoignition of varying violence before the passage of a probable detonation wave. Extensive autoignition without occurrence of gas vibrations was seen in one explosion.

Three-dimensional quantitative flow diagnostics

NASA Technical Reports Server (NTRS)

Miles, Richard B.; Nosenchuck, Daniel M.

1989-01-01

The principles, capabilities, and practical implementation of advanced measurement techniques for the quantitative characterization of three-dimensional flows are reviewed. Consideration is given to particle, Rayleigh, and Raman scattering; fluorescence; flow marking by H2 bubbles, photochromism, photodissociation, and vibrationally excited molecules; light-sheet volume imaging; and stereo imaging. Also discussed are stereo schlieren methods, holographic particle imaging, optical tomography, acoustic and magnetic-resonance imaging, and the display of space-filling data. Extensive diagrams, graphs, photographs, sample images, and tables of numerical data are provided.

Thermodynamic phase transition of a black hole in rainbow gravity

NASA Astrophysics Data System (ADS)

Feng, Zhong-Wen; Yang, Shu-Zheng

2017-09-01

In this letter, using the rainbow functions that were proposed by Magueijo and Smolin, we investigate the thermodynamics and the phase transition of rainbow Schwarzschild black hole. First, we calculate the rainbow gravity corrected Hawking temperature. From this modification, we then derive the local temperature, free energy, and other thermodynamic quantities in an isothermal cavity. Finally, we analyze the critical behavior, thermodynamic stability, and phase transition of the rainbow Schwarzschild black hole. The results show that the rainbow gravity can stop the Hawking radiation in the final stages of black holes' evolution and lead to the remnants of black holes. Furthermore, one can observe that the rainbow Schwarzschild black hole has one first-order phase transition, two second-order phase transitions, and three Hawking-Page-type phase transitions in the framework of rainbow gravity theory.

Nonsingular universe in massive gravity's rainbow

NASA Astrophysics Data System (ADS)

Hendi, S. H.; Momennia, M.; Eslam Panah, B.; Panahiyan, S.

2017-06-01

One of the fundamental open questions in cosmology is whether we can regard the universe evolution without singularity like a Big Bang or a Big Rip. This challenging subject stimulates one to regard a nonsingular universe in the far past with an arbitrarily large vacuum energy. Considering the high energy regime in the cosmic history, it is believed that Einstein gravity should be corrected to an effective energy dependent theory which could be acquired by gravity's rainbow. On the other hand, employing massive gravity provided us with solutions to some of the long standing fundamental problems of cosmology such as cosmological constant problem and self acceleration of the universe. Considering these aspects of gravity's rainbow and massive gravity, in this paper, we initiate studying FRW cosmology in the massive gravity's rainbow formalism. At first, we show that although massive gravity modifies the FRW cosmology, but it does not itself remove the big bang singularity. Then, we generalize the massive gravity to the case of energy dependent spacetime and find that massive gravity's rainbow can remove the early universe singularity. We bring together all the essential conditions for having a nonsingular universe and the effects of both gravity's rainbow and massive gravity generalizations on such criteria are determined.

Similar Genetic Architecture with Shared and Unique Quantitative Trait Loci for Bacterial Cold Water Disease Resistance in Two Rainbow Trout Breeding Populations

PubMed Central

Vallejo, Roger L.; Liu, Sixin; Gao, Guangtu; Fragomeni, Breno O.; Hernandez, Alvaro G.; Leeds, Timothy D.; Parsons, James E.; Martin, Kyle E.; Evenhuis, Jason P.; Welch, Timothy J.; Wiens, Gregory D.; Palti, Yniv

2017-01-01

Bacterial cold water disease (BCWD) causes significant mortality and economic losses in salmonid aquaculture. In previous studies, we identified moderate-large effect quantitative trait loci (QTL) for BCWD resistance in rainbow trout (Oncorhynchus mykiss). However, the recent availability of a 57 K SNP array and a reference genome assembly have enabled us to conduct genome-wide association studies (GWAS) that overcome several experimental limitations from our previous work. In the current study, we conducted GWAS for BCWD resistance in two rainbow trout breeding populations using two genotyping platforms, the 57 K Affymetrix SNP array and restriction-associated DNA (RAD) sequencing. Overall, we identified 14 moderate-large effect QTL that explained up to 60.8% of the genetic variance in one of the two populations and 27.7% in the other. Four of these QTL were found in both populations explaining a substantial proportion of the variance, although major differences were also detected between the two populations. Our results confirm that BCWD resistance is controlled by the oligogenic inheritance of few moderate-large effect loci and a large-unknown number of loci each having a small effect on BCWD resistance. We detected differences in QTL number and genome location between two GWAS models (weighted single-step GBLUP and Bayes B), which highlights the utility of using different models to uncover QTL. The RAD-SNPs detected a greater number of QTL than the 57 K SNP array in one population, suggesting that the RAD-SNPs may uncover polymorphisms that are more unique and informative for the specific population in which they were discovered. PMID:29109734

Similar Genetic Architecture with Shared and Unique Quantitative Trait Loci for Bacterial Cold Water Disease Resistance in Two Rainbow Trout Breeding Populations.

PubMed

Vallejo, Roger L; Liu, Sixin; Gao, Guangtu; Fragomeni, Breno O; Hernandez, Alvaro G; Leeds, Timothy D; Parsons, James E; Martin, Kyle E; Evenhuis, Jason P; Welch, Timothy J; Wiens, Gregory D; Palti, Yniv

2017-01-01

Bacterial cold water disease (BCWD) causes significant mortality and economic losses in salmonid aquaculture. In previous studies, we identified moderate-large effect quantitative trait loci (QTL) for BCWD resistance in rainbow trout ( Oncorhynchus mykiss ). However, the recent availability of a 57 K SNP array and a reference genome assembly have enabled us to conduct genome-wide association studies (GWAS) that overcome several experimental limitations from our previous work. In the current study, we conducted GWAS for BCWD resistance in two rainbow trout breeding populations using two genotyping platforms, the 57 K Affymetrix SNP array and restriction-associated DNA (RAD) sequencing. Overall, we identified 14 moderate-large effect QTL that explained up to 60.8% of the genetic variance in one of the two populations and 27.7% in the other. Four of these QTL were found in both populations explaining a substantial proportion of the variance, although major differences were also detected between the two populations. Our results confirm that BCWD resistance is controlled by the oligogenic inheritance of few moderate-large effect loci and a large-unknown number of loci each having a small effect on BCWD resistance. We detected differences in QTL number and genome location between two GWAS models (weighted single-step GBLUP and Bayes B), which highlights the utility of using different models to uncover QTL. The RAD-SNPs detected a greater number of QTL than the 57 K SNP array in one population, suggesting that the RAD-SNPs may uncover polymorphisms that are more unique and informative for the specific population in which they were discovered.

On the total rainbow connection of the wheel related graphs

NASA Astrophysics Data System (ADS)

Hasan, M. S.; Slamin; Dafik; Agustin, I. H.; Alfarisi, R.

2018-04-01

Let G = (V(G), E(G)) be a nontrivial connected graph with an edge coloring c : E(G) → {1, 2, …, l}, l ɛ N, with the condition that the adjacent edges may be colored by the same colors. A path P in G is called rainbow path if no two edges of P are colored the same. The smallest number of colors that are needed to make G rainbow edge-connected is called the rainbow edge-connection of G, denoted by rc(G). A vertex-colored graph is rainbow vertex-connected if any two vertices are connected by a path whose internal vertices have distinct colors. The smallest number of colors that are needed to make G rainbow vertex-connected is called the rainbow vertex-connection of G, denoted by rvc(G). A total-colored path is total-rainbow if edges and internal vertices have distinct colours. The minimum number of colour required to color the edges and vertices of G is called the total rainbow connection number of G, denoted by trc(G). In this paper, we determine the total rainbow connection number of some wheel related graphs such as gear graph, antiweb-gear graph, infinite class of convex polytopes, sunflower graph, and closed-sunflower graph.

Gravitational time advancement under gravity's rainbow

NASA Astrophysics Data System (ADS)

Deng, Xue-Mei; Xie, Yi

2017-09-01

Under gravity's rainbow, we investigate its effects on the gravitational time advancement, which is a natural consequence of measuring proper time span for a photon's round trip. This time advancement can be complementary to the time delay for testing the gravity's rainbow, because they are sensitive to different modified dispersion relations (MDRs). Its observability on ranging a spacecraft far from the Earth by two radio and a laser links is estimated at superior conjunction (SC) and inferior conjunction (IC). We find that (1) the IC is more favorable than the SC for measurement on the advancement caused by the rainbow; (2) a specific type of MDR has a significantly larger effect on the advancement than others in both SC and IC cases; and (3) a combination of available optical clocks and the realization of planetary laser ranging in the future will benefit distinguishing the gravity's rainbow from GR by measuring the gravitational time advancement.

A first generation BAC-based physical map of the rainbow trout genome

PubMed Central

Palti, Yniv; Luo, Ming-Cheng; Hu, Yuqin; Genet, Carine; You, Frank M; Vallejo, Roger L; Thorgaard, Gary H; Wheeler, Paul A; Rexroad, Caird E

2009-01-01

Background Rainbow trout (Oncorhynchus mykiss) are the most-widely cultivated cold freshwater fish in the world and an important model species for many research areas. Coupling great interest in this species as a research model with the need for genetic improvement of aquaculture production efficiency traits justifies the continued development of genomics research resources. Many quantitative trait loci (QTL) have been identified for production and life-history traits in rainbow trout. A bacterial artificial chromosome (BAC) physical map is needed to facilitate fine mapping of QTL and the selection of positional candidate genes for incorporation in marker-assisted selection (MAS) for improving rainbow trout aquaculture production. This resource will also facilitate efforts to obtain and assemble a whole-genome reference sequence for this species. Results The physical map was constructed from DNA fingerprinting of 192,096 BAC clones using the 4-color high-information content fingerprinting (HICF) method. The clones were assembled into physical map contigs using the finger-printing contig (FPC) program. The map is composed of 4,173 contigs and 9,379 singletons. The total number of unique fingerprinting fragments (consensus bands) in contigs is 1,185,157, which corresponds to an estimated physical length of 2.0 Gb. The map assembly was validated by 1) comparison with probe hybridization results and agarose gel fingerprinting contigs; and 2) anchoring large contigs to the microsatellite-based genetic linkage map. Conclusion The production and validation of the first BAC physical map of the rainbow trout genome is described in this paper. We are currently integrating this map with the NCCCWA genetic map using more than 200 microsatellites isolated from BAC end sequences and by identifying BACs that harbor more than 300 previously mapped markers. The availability of an integrated physical and genetic map will enable detailed comparative genome analyses, fine mapping of

A schlieren optical study of the human cough with and without wearing masks for aerosol infection control

PubMed Central

Tang, Julian W.; Liebner, Thomas J.; Craven, Brent A.; Settles, Gary S.

2009-01-01

Various infectious agents are known to be transmitted naturally via respiratory aerosols produced by infected patients. Such aerosols may be produced during normal activities by breathing, talking, coughing and sneezing. The schlieren optical method, previously applied mostly in engineering and physics, can be effectively used here to visualize airflows around human subjects in such indoor situations, non-intrusively and without the need for either tracer gas or airborne particles. It accomplishes this by rendering visible the optical phase gradients owing to real-time changes in air temperature. In this study, schlieren video records are obtained of human volunteers coughing with and without wearing standard surgical and N95 masks. The object is to characterize the exhaled airflows and evaluate the effect of these commonly used masks on the fluid-dynamic mechanisms that spread infection by coughing. Further, a high-speed schlieren video of a single cough is analysed by a computerized method of tracking individual turbulent eddies, demonstrating the non-intrusive velocimetry of the expelled airflow. Results show that human coughing projects a rapid turbulent jet into the surrounding air, but that wearing a surgical or N95 mask thwarts this natural mechanism of transmitting airborne infection, either by blocking the formation of the jet (N95 mask), or by redirecting it in a less harmful direction (surgical mask). PMID:19815575

A schlieren optical study of the human cough with and without wearing masks for aerosol infection control.

PubMed

Tang, Julian W; Liebner, Thomas J; Craven, Brent A; Settles, Gary S

2009-12-06

Various infectious agents are known to be transmitted naturally via respiratory aerosols produced by infected patients. Such aerosols may be produced during normal activities by breathing, talking, coughing and sneezing. The schlieren optical method, previously applied mostly in engineering and physics, can be effectively used here to visualize airflows around human subjects in such indoor situations, non-intrusively and without the need for either tracer gas or airborne particles. It accomplishes this by rendering visible the optical phase gradients owing to real-time changes in air temperature. In this study, schlieren video records are obtained of human volunteers coughing with and without wearing standard surgical and N95 masks. The object is to characterize the exhaled airflows and evaluate the effect of these commonly used masks on the fluid-dynamic mechanisms that spread infection by coughing. Further, a high-speed schlieren video of a single cough is analysed by a computerized method of tracking individual turbulent eddies, demonstrating the non-intrusive velocimetry of the expelled airflow. Results show that human coughing projects a rapid turbulent jet into the surrounding air, but that wearing a surgical or N95 mask thwarts this natural mechanism of transmitting airborne infection, either by blocking the formation of the jet (N95 mask), or by redirecting it in a less harmful direction (surgical mask).

Introgression and susceptibility to disease in a wild population of rainbow trout

USGS Publications Warehouse

Currens, K.P.; Hemmingsen, A.R.; French, R.A.; Buchanan, D.V.; Schreck, C.B.; Li, H.W.

1997-01-01

We examined susceptibility of wild rainbow trout Oncorhynchus mykiss from the Metolius River, a tributary of the Deschutes River, Oregon, to genetic introgression and ceratomyxosis as a result of stocking nonnative hatchery rainbow trout. Ceratomyxa shasta, an enzootic myxosporean parasite that can be lethal to nonnative hatchery rainbow trout, might have been limiting the interbreeding of hatchery and wild rainbow trout in the river. However, rainbow trout from the Metolius River had allozyme frequencies intermediate between those of wild and hatchery fish at LDH-B2* and sSOD-1*, two diagnostic genetic loci that allow the inland subspecies of rainbow trout to be distinguished from hatchery strains of coastal origin. They also had notable frequencies of ADA-1*85, an allele documented in hatchery rainbow trout but rarely seen in wild populations. We also found that rainbow trout in the Metolius River averaged 138.9 scales in the lateral series, intermediate between the counts for 9 coastal or nonnative hatchery populations, which always had fewer than 140 scales, and 10 inland populations, which always had more than 140 scales. Disease challenges revealed that rainbow trout from the Metolius River had much greater susceptibility to C. shasta than rainbow trout from the Deschutes River, which have genetic resistance to the lethal disease. Based on these data, we concluded that introgression with nonnative hatchery rainbow trout has reduced the abilities of wild rainbow trout in the Metolius River to survive when conditions for ceratomyxosis infection occur.

Status and opportunities for genomics research with rainbow trout

USGS Publications Warehouse

Thorgaard, G.H.; Bailey, G.S.; Williams, D.; Buhler, D.R.; Kaattari, S.L.; Ristow, S.S.; Hansen, J.D.; Winton, J.R.; Bartholomew, J.L.; Nagler, J.J.; Walsh, P.J.; Vijayan, M.M.; Devlin, R.H.; Hardy, R.W.; Overturf, K.E.; Young, W.P.; Robison, B.D.; Rexroad, C.; Palti, Y.

2002-01-01

The rainbow trout (Oncorhynchus mykiss) is one of the most widely studied of model fish species. Extensive basic biological information has been collected for this species, which because of their large size relative to other model fish species are particularly suitable for studies requiring ample quantities of specific cells and tissue types. Rainbow trout have been widely utilized for research in carcinogenesis, toxicology, comparative immunology, disease ecology, physiology and nutrition. They are distinctive in having evolved from a relatively recent tetraploid event, resulting in a high incidence of duplicated genes. Natural populations are available and have been well characterized for chromosomal, protein, molecular and quantitative genetic variation. Their ease of culture, and experimental and aquacultural significance has led to the development of clonal lines and the widespread application of transgenic technology to this species. Numerous microsatellites have been isolated and two relatively detailed genetic maps have been developed. Extensive sequencing of expressed sequence tags has begun and four BAC libraries have been developed. The development and analysis of additional genomic sequence data will provide distinctive opportunities to address problems in areas such as evolution of the immune system and duplicate genes. ?? 2002 Elsevier Science Inc. All rights reserved.

Witches, Ghosts, and Other Apparitions (Rainbow Teachers, Rainbow Students).

ERIC Educational Resources Information Center

Cruz, MaryCarmen; Duff, Ogle Burks

1996-01-01

Describes a number of ghost stories from American cultures, all of which, despite their different origins, seek to stimulate horror, escapism, and fantastic pleasure. Suggests that the stories may be used to improve reading and writing and incorporate "rainbow" themes in the classroom. (TB)

Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD) is one of the frequent causes of elevated mortality in salmonid aquaculture. Previously, we identified and validated microsatellites associated with QTL (quantitative trait loci) for BCWD resistance and spleen size in rainbow trout. The objective of this study was...

Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD) is one of the frequent causes of elevated mortality in salmonid aquaculture. Previously, we identified and validated microsatellite markers associated with QTL (quantitative trait loci) for BCWD resistance and spleen size in rainbow trout. The objective of this st...

Rainbow Trapping in Hyperbolic Metamaterial Waveguide

PubMed Central

Hu, Haifeng; Ji, Dengxin; Zeng, Xie; Liu, Kai; Gan, Qiaoqiang

2013-01-01

The recent reported trapped “rainbow” storage of light using metamaterials and plasmonic graded surface gratings has generated considerable interest for on-chip slow light. The potential for controlling the velocity of broadband light in guided photonic structures opens up tremendous opportunities to manipulate light for optical modulation, switching, communication and light-matter interactions. However, previously reported designs for rainbow trapping are generally constrained by inherent difficulties resulting in the limited experimental realization of this intriguing effect. Here we propose a hyperbolic metamaterial structure to realize a highly efficient rainbow trapping effect, which, importantly, is not limited by those severe theoretical constraints required in previously reported insulator-negative-index-insulator, insulator-metal-insulator and metal-insulator-metal waveguide tapers, and therefore representing a significant promise to realize the rainbow trapping structure practically. PMID:23409240

Background-Oriented Schlieren for Large-Scale and High-Speed Aerodynamic Phenomena

NASA Technical Reports Server (NTRS)

Mizukaki, Toshiharu; Borg, Stephen; Danehy, Paul M.; Murman, Scott M.; Matsumura, Tomoharu; Wakabayashi, Kunihiko; Nakayama, Yoshio

2015-01-01

Visualization of the flow field around a generic re-entry capsule in subsonic flow and shock wave visualization with cylindrical explosives have been conducted to demonstrate sensitivity and applicability of background-oriented schlieren (BOS) for field experiments. The wind tunnel experiment suggests that BOS with a fine-pixel imaging device has a density change detection sensitivity on the order of 10(sup -5) in subsonic flow. In a laboratory setup, the structure of the shock waves generated by explosives have been successfully reconstructed by a computed tomography method combined with BOS.

Synchronized Schlieren method for vortex shedding in cascade during acoustic resonance

NASA Astrophysics Data System (ADS)

Nagashima, T.; Tanida, Y.

1986-10-01

An evaluation is made of synchronized schlieren optical system methods for the simultaneous visualization of both the acoustic wave and vortex shedding phenomena encountered during acoustic resonance excited by vortex shedding from the trailing edges of cascade blades. Attention is given to the case of parallel flat plate blades in throughflow velocities of up to 100 m/s. The acoustic wavefront is found to appear in the trailing edge region and travel upstream when a pair of vortices of opposite sign are fully developed at the trailing edge.

T-Shirts Can Create Positive Images (Rainbow Teachers, Rainbow Students).

ERIC Educational Resources Information Center

Parks-Lee, Barbara D.

1995-01-01

Explains how the artistic design of t-shirts with positive images, some having grown out of the study of particular literary works, do much for student attitudes, self-awareness, pride, and interest in school, especially in a "rainbow classroom." (TB)

Microsatellite analyses of San Franciscuito Creek rainbow trout

USGS Publications Warehouse

Nielsen, Jennifer L.

2000-01-01

Microsatellite genetic diversity found in San Francisquito Creek rainbow trout support a close genetic relationship with rainbow trout (Oncorhynchus mykiss) from another tributary of San Francisco Bay, Alameda Creek, and coastal trout found in Lagunitas Creek, Marin County, California. Fish collected for this study from San Francisquito Creek showed a closer genetic relationship to fish from the north-central California steelhead ESU than for any other listed group of O. mykiss. No significant genotypic or allelic frequency associations could be drawn between San Francisquito Creek trout and fish collected from the four primary rainbow trout hatchery strains in use in California, i.e. Whitney, Mount Shasta, Coleman, and Hot Creek hatchery fish. Indeed, genetic distance analyses (δµ2) supported separation between San Francisquito Creek trout and all hatchery trout with 68% bootstrap values in 1000 replicate neighbor-joining trees. Not surprisingly, California hatchery rainbow trout showed their closest evolutionary relationships with contemporary stocks derived from the Sacramento River. Wild collections of rainbow trout from the Sacramento-San Joaquin basin in the Central Valley were also clearly separable from San Francisquito Creek fish supporting separate, independent ESUs for two groups of O. mykiss (one coastal and one Central Valley) with potentially overlapping life histories in San Francisco Bay. These data support the implementation of management and conservation programs for rainbow trout in the San Francisquito Creek drainage as part of the central California coastal steelhead ESU.

Background - oriented schlieren analysis of shockwave propagation from encased and uncased explosives

NASA Astrophysics Data System (ADS)

Romo, Cynthia Paulinne

High speed digital video images of encased and uncased large-scale explosions of Ammonium Nitrate Fuel Oil (ANFO), and Composition C-4 (C-4) at different masses were analyzed using the background oriented schlieren visualization technique. The encased explosions for ANFO and C-4 took place in the form of car bombs and pipe bombs respectively. The data obtained from the video footage were used to produce shock wave radius vs time profiles, as well as Mach number vs shock wave position profiles. The experimentally measured shock wave data for each explosive material were scaled using Sachs' scaling laws to a 1 kilogram charge at normal temperature and pressure. The results of C-4 were compared to literature, while the results of scaled ANFO were compared to each other, and to the results obtained during the uncased detonations. The comparison between the scaled profiles gathered from the encased and uncased detonations resulted in the identification of the relative amount of energy lost due to the fragmentation of the case. The C-4 profiles were compared to those obtained from computational simulations performed via CTH. The C-4 results showed an agreement in the data reported in literature and that obtained using the background-oriented schlieren (BOS) technique, as well as a good overall agreement with the profiles obtained computationally.

Determination of benzocaine in rainbow trout plasma

USGS Publications Warehouse

Bernardy, Jeffery A.; Coleman, K.S.; Stehly, G.R.; Gingerich, William H.

1996-01-01

A liquid chromatographic method is described for analysis of benzocaine (BZ), a proposed fish anesthetic, in rainbow trout plasma, Mean recoveries of BZ from plasma samples fortified at 44-10 100 ng/mL were 96-100%. The method detection limit is 10 ng/mL, and the limit of quantitation is 37 ng/mL. Acetylation of BZ occurs in whole blood after storage at room temperature (i.e., 21 degrees C) for 10 min. However, no acetylation of BZ was detected in plasma samples held at room temperature for 4 h, Mean method precision for plasma samples with incurred BZ residue is similar to that for fortified samples in the same concentration range (relative standard deviations of 0.9 and 1.2%, respectively).

Schlieren Technique Applied to Magnetohydrodynamic Generator Plasma Torch

NASA Astrophysics Data System (ADS)

Chopra, Nirbhav; Pearcy, Jacob; Jaworski, Michael

2017-10-01

Magnetohydrodynamic (MHD) generators are a promising augmentation to current hydrocarbon based combustion schemes for creating electrical power. In recent years, interest in MHD generators has been revitalized due to advances in a number of technologies such as superconducting magnets, solid-state power electronics and materials science as well as changing economics associated with carbon capture, utilization, and sequestration. We use a multi-wavelength schlieren imaging system to evaluate electron density independently of gas density in a plasma torch under conditions relevant to MHD generators. The sensitivity and resolution of the optical system are evaluated alongside the development of an automated analysis and calibration program in Python. Preliminary analysis shows spatial resolutions less than 1mm and measures an electron density of ne = 1 ×1016 cm-3 in an atmospheric microwave torch. Work supported by DOE contract DE-AC02-09CH11466.

Calibration of a Background Oriented Schlieren (BOS) Set-up

NASA Astrophysics Data System (ADS)

Porta, David; Echeverría, Carlos; Cardoso, Hiroki; Aguayo, Alejandro; Stern, Catalina

2014-11-01

We use two materials with different known indexes of refraction to calibrate a Background Oriented Schlieren (BOS) experimental set-up, and to validate the Lorenz-Lorentz equation. BOS is used in our experiments to determine local changes of density in the shock pattern of an axisymmetric supersonic air jet. It is important to validate, in particular, the Gladstone Dale approximation (index of refraction close to one) in our experimental conditions and determine the uncertainty of our density measurements. In some cases, the index of refraction of the material is well known, but in others the density is measured and related to the displacement field. We acknowledge support from UNAM through DGAPA PAPIIT IN117712 and the Graduate Program in Mechanical Engineering.

Combined planar imaging of schlieren photography with OH-LIPF and spontaneous OH-emission in a 2-D valveless pulse combustor

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ishino, Yojiro; Hasegawa, Tatsuya; Yamaguchi, Shigeki

1999-07-01

Using a novel optical system, simultaneous imaging of schlieren photography and laser induced predissociation fluorescence of OH radicals (OH-LIPF) have been carried out to examine combustion processes and flame structure in a two-dimensional valveless pulse combustor. Simultaneous imaging of schlieren photographs and spontaneous OH-emission have also been made, in order to obtain information on the behavior of the flame front during a cycle of pulsation. The pulse combustor used in this experiment consists of a combustion chamber of a volume of 125 cm{sup 3} and a tailpipe of a length of 976 mm, which is followed by an automobile muffler.more » The fuel used is commercial grade gaseous propane.« less

Rainbows in rotationally inelastic scattering: a comparative study of different model potential surfaces and dynamical approximations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Schinke, R.; Korsch, H.J.; Poppe, D.

1982-12-15

Rainbow structures in rotationally elastic and inelastic differential cross sections in atom--diatom collisions are investigated by comparison of three model potential energy surfaces labeled I, II, and III which are represented by V(R,..gamma..) = V/sub 0/(R)+V/sub 2/(R)P/sub 2/(cos ..gamma..). The cross sections are calculated within the quantal infinite-order-sudden (IOS) approximation. The anisotropic part V/sub 2/ is the same for all potentials and purely repulsive. The isotropic part V/sub 0/ for potential I is also repulsive and the differential cross sections show the well-studied rotational rainbow structures. Structural changes occur for collisions in potential II and III which have V/sub 0/more » terms being attractive at intermediate and large atom--molecule separations and having well depths of 10% and 25% of the collision energy, respectively. For example, the elastic cross section has no classical rainbow in the case of potential I but three in the case of potential III. The rainbow structures are analyzed within the classical and semiclassical versions of the IOS approximation and interpreted in terms of catastrophe theory. The quantitative comparison of the classical with the quantal IOS cross sections manifests possible quantum effects, i.e., tunneling into nonclassical regions and interference effects due to the superposition of several contributions (up to six in the present study). They can be very prominent and thus we conclude that much caution is needed if experimental data are compared with classical calculations. The accuracy of the IOS approximation is tested by comparison of classical IOS cross sections with cross sections obtained from exact classical trajectory calculations. The agreement is generally good with the exemption of the rainbow region and small angle, rotationally elastic scattering.« less

Rainbow trapping of ultrasonic guided waves in chirped phononic crystal plates.

PubMed

Tian, Zhenhua; Yu, Lingyu

2017-01-05

The rainbow trapping effect has been demonstrated in electromagnetic and acoustic waves. In this study, rainbow trapping of ultrasonic guided waves is achieved in chirped phononic crystal plates that spatially modulate the dispersion, group velocity, and stopband. The rainbow trapping is related to the progressively slowing group velocity, and the extremely low group velocity near the lower boundary of a stopband that gradually varies in chirped phononic crystal plates. As guided waves propagate along the phononic crystal plate, waves gradually slow down and finally stop forward propagating. The energy of guided waves is concentrated at the low velocity region near the stopband. Moreover, the guided wave energy of different frequencies is concentrated at different locations, which manifests as rainbow guided waves. We believe implementing the rainbow trapping will open new paradigms for guiding and focusing of guided waves. Moreover, the rainbow guided waves with energy concentration and spatial separation of frequencies may have potential applications in nondestructive evaluation, spatial wave filtering, energy harvesting, and acoustofluidics.

Experimental evaluation of rainbow trout Oncorhynchus mykiss predation on longnose dace Rhinichthys cataractae

USGS Publications Warehouse

Turek, Kelly C.; Pegg, Mark A.; Pope, Kevin L.

2014-01-01

Laboratory and in-stream enclosure experiments were used to determine whether rainbow trout Oncorhynchus mykiss influence survival of longnose dace Rhinichthys cataractae. In the laboratory, adult rainbow trout preyed on longnose dace in 42% of trials and juvenile rainbow trout did not prey on longnose dace during the first 6 h after rainbow trout introduction. Survival of longnose dace did not differ in the presence of adult rainbow trout previously exposed to active prey and those not previously exposed to active prey ( = 0.28, P = 0.60). In field enclosures, the number of longnose dace decreased at a faster rate in the presence of rainbow trout relative to controls within the first 72 h, but did not differ between moderate and high densities of rainbow trout (F2,258.9 = 3.73, P = 0.03). Additionally, longnose dace were found in 7% of rainbow trout stomachs after 72 h in enclosures. Rainbow trout acclimated to the stream for longer periods had a greater initial influence on the number of longnose dace remaining in enclosures relative to those acclimated for shorter periods regardless of rainbow trout density treatment (F4,148.5 = 2.50, P = 0.04). More research is needed to determine how predation rates will change in natural environments, under differing amounts of habitat and food resources and in the context of whole assemblages. However, if rainbow trout are introduced into the habitat of longnose dace, some predation on longnose dace is expected, even when rainbow trout have no previous experience with active prey.

3. SWIMMING POOL. VIEW TO SOUTHEAST. Rainbow Hydroelectric Facility, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

3. SWIMMING POOL. VIEW TO SOUTHEAST. - Rainbow Hydroelectric Facility, Swimming Pool, On north bank of Missouri River 2 miles Northeast of Great Falls, & end of Rainbow Dam Road, Great Falls, Cascade County, MT

1. SWIMMING POOL. VIEW TO WEST. Rainbow Hydroelectric Facility, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

1. SWIMMING POOL. VIEW TO WEST. - Rainbow Hydroelectric Facility, Swimming Pool, On north bank of Missouri River 2 miles Northeast of Great Falls, & end of Rainbow Dam Road, Great Falls, Cascade County, MT

2. SWIMMING POOL. VIEW TO SOUTHEAST. Rainbow Hydroelectric Facility, ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

2. SWIMMING POOL. VIEW TO SOUTHEAST. - Rainbow Hydroelectric Facility, Swimming Pool, On north bank of Missouri River 2 miles Northeast of Great Falls, & end of Rainbow Dam Road, Great Falls, Cascade County, MT

Rainbow glare by retinal imaging

NASA Astrophysics Data System (ADS)

Sun, Han-Ying; Chiang, Yao-Ting; Yeh, Shang-Min; Huang, Shuan-Yu; Horng, Chi-Ting; Wang, Hsiang-Chen

2016-07-01

This study aims to determine whether IntraLase surgery can cause rainbow glare. Monte-Carlo ray tracing method is used to study visual conditions of an ordered microstructure array on the cornea. A corneal flap in the simulated eye model can generate numerous microbubbles caused by IntraLase surgery. Moreover, this study evaluates the visual performance under different conditions such as the size and interval of the microbubble structure on the cornea with vary incident angles and diameters of light. The results of this study can help elucidate the real cause of rainbow glare as a side effect of IntraLase.

Visualizing the Invisible: The Construction of Three Low-Cost Schlieren Imaging Systems for the Undergraduate Laboratory

ERIC Educational Resources Information Center

Gopal, Venkatesh; Klosowiak, Julian L.; Jaeger, Robert; Selimkhanov, Timur; Hartmann, Mitra J. Z.

2008-01-01

We describe the construction and operation of three low-cost schlieren imaging systems that can be fabricated using surplus optics and 80/20, an aluminium extrusion based construction system. Each system has a different optical configuration. The low cost and ease of construction makes these systems highly suitable for high-school and…

Background Oriented Schlieren Implementation in a Jet-Surface Interaction Test

NASA Technical Reports Server (NTRS)

Clem, Michelle M.; Brown, Clifford A.; Fagan, Amy

2013-01-01

Many current and future aircraft designs rely on the wing or other aircraft surfaces to shield the engine noise from observers on the ground. However the available data regarding how a planar surface interacts with a jet to shield and/or enhance the jet noise are currently limited. Therefore, the Jet-Surface Interaction Tests supported by NASA's Fundamental Aeronautics Program's Fixed Wing Project were undertaken to supply experimental data covering a wide range of surface geometries and positions interacting with high-speed jet flows in order to support the development of noise prediction methods. Phase 1 of the Test was conducted in the Aero-Acoustic Propulsion Laboratory at NASA Glenn Research Center and consisted of validating noise prediction schemes for a round nozzle interacting with a planar surface. Phased array data and far-field acoustic data were collected for both the shielded and reflected sides of the surface. Phase 1 results showed that the broadband shock noise was greatly reduced by the surface when the jet was operated at the over-expanded condition, however, it was unclear whether this reduction was due a change in the shock cell structure by the surface. In the present study, Background Oriented Schlieren is implemented in Phase 2 of the Jet-Surface Interaction Tests to investigate whether the planar surface interacts with the high-speed jet ow to change the shock cell structure. Background Oriented Schlieren data are acquired for under-expanded, ideally-expanded, and over-expanded ow regimes for multiple axial and radial positions of the surface at three different plate lengths. These data are analyzed with far-field noise measurements to relate the shock cell structure to the broadband shock noise produced by a jet near a surface.

NONSINGULAR UNIVERSES IN GAUSS–BONNET GRAVITY’S RAINBOW

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hendi, Seyed Hossein; Momennia, Mehrab; Panah, Behzad Eslam

In this paper, we study the rainbow deformation of Friedmann-Robertson-Walker (FRW) cosmology in both Einstein gravity and Gauss–Bonnet (GB) gravity. We demonstrate that the singularity in FRW cosmology can be removed because of the rainbow deformation of the FRW metric. We obtain the general constraints required for FRW cosmology to be free of singularities. We observe that the inclusion of GB gravity can significantly change the constraints required to obtain nonsingular universes. We use rainbow functions motivated by the hard spectra of gamma-ray bursts to deform FRW cosmology and explicitly demonstrate that such a deformation removes the singularity in FRWmore » cosmology.« less

Zooplankton size selection relative to gill raker spacing in rainbow trout

USGS Publications Warehouse

Budy, P.; Haddix, T.; Schneidervin, R.

2005-01-01

Rainbow trout Oncorhynchus mykiss are one of the most widely stocked salmonids worldwide, often based on the assumption that they will effectively utilize abundant invertebrate food resources. We evaluated the potential for feeding morphology to affect prey selection by rainbow trout using a combination of laboratory feeding experiments and field observations in Flaming Gorge Reservoir, Utah-Wyoming. For rainbow trout collected from the reservoir, inter-gill raker spacing averaged 1.09 mm and there was low variation among fish overall (SD = 0.28). Ninety-seven percent of all zooplankton observed in the diets of rainbow trout collected in the reservoir were larger than the interraker spacing, while only 29% of the zooplankton found in the environment were larger than the interraker spacing. Over the size range of rainbow trout evaluated here (200-475 mm), interraker spacing increased moderately with increasing fish length; however, the size of zooplankton found in the diet did not increase with increasing fish length. In laboratory experiments, rainbow trout consumed the largest zooplankton available; the mean size of zooplankton observed in the diets was significantly larger than the mean size of zooplankton available. Electivity indices for both laboratory and field observations indicated strong selection for larger-sized zooplankton. The size threshold at which electivity switched from selection against smaller-sized zooplankton to selection for larger-sized zooplankton closely corresponded to the mean interraker spacing for both groups (???1-1.2 mm). The combination of results observed here indicates that rainbow trout morphology limits the retention of different-sized zooplankton prey and reinforces the importance of understanding how effectively rainbow trout can utilize the type and sizes of different prey available in a given system. These considerations may improve our ability to predict the potential for growth and survival of rainbow trout within and

Rainbow trapping of ultrasonic guided waves in chirped phononic crystal plates

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tian, Zhenhua; Yu, Lingyu

The rainbow trapping effect has been demonstrated in electromagnetic and acoustic waves. In this study, rainbow trapping of ultrasonic guided waves is achieved in chirped phononic crystal plates that spatially modulate the dispersion, group velocity, and stopband. The rainbow trapping is related to the progressively slowing group velocity, and the extremely low group velocity near the lower boundary of a stopband that gradually varies in chirped phononic crystal plates. As guided waves propagate along the phononic crystal plate, waves gradually slow down and finally stop forward propagating. The energy of guided waves is concentrated at the low velocity region nearmore » the stopband. Moreover, the guided wave energy of different frequencies is concentrated at different locations, which manifests as rainbow guided waves. We believe implementing the rainbow trapping will open new paradigms for guiding and focusing of guided waves. Furthermore, the rainbow guided waves with energy concentration and spatial separation of frequencies may have potential applications in nondestructive evaluation, spatial wave filtering, energy harvesting, and acoustofluidics.« less

Rainbow trapping of ultrasonic guided waves in chirped phononic crystal plates

DOE PAGES

Tian, Zhenhua; Yu, Lingyu

2017-01-05

The rainbow trapping effect has been demonstrated in electromagnetic and acoustic waves. In this study, rainbow trapping of ultrasonic guided waves is achieved in chirped phononic crystal plates that spatially modulate the dispersion, group velocity, and stopband. The rainbow trapping is related to the progressively slowing group velocity, and the extremely low group velocity near the lower boundary of a stopband that gradually varies in chirped phononic crystal plates. As guided waves propagate along the phononic crystal plate, waves gradually slow down and finally stop forward propagating. The energy of guided waves is concentrated at the low velocity region nearmore » the stopband. Moreover, the guided wave energy of different frequencies is concentrated at different locations, which manifests as rainbow guided waves. We believe implementing the rainbow trapping will open new paradigms for guiding and focusing of guided waves. Furthermore, the rainbow guided waves with energy concentration and spatial separation of frequencies may have potential applications in nondestructive evaluation, spatial wave filtering, energy harvesting, and acoustofluidics.« less

Schlieren image velocimetry measurements in a rocket engine exhaust plume

NASA Astrophysics Data System (ADS)

Morales, Rudy; Peguero, Julio; Hargather, Michael

2017-11-01

Schlieren image velocimetry (SIV) measures velocity fields by tracking the motion of naturally-occurring turbulent flow features in a compressible flow. Here the technique is applied to measuring the exhaust velocity profile of a liquid rocket engine. The SIV measurements presented include discussion of visibility of structures, image pre-processing for structure visibility, and ability to process resulting images using commercial particle image velocimetry (PIV) codes. The small-scale liquid bipropellant rocket engine operates on nitrous oxide and ethanol as propellants. Predictions of the exhaust velocity are obtained through NASA CEA calculations and simple compressible flow relationships, which are compared against the measured SIV profiles. Analysis of shear layer turbulence along the exhaust plume edge is also presented.

75 FR 57912 - Application To Export Electric Energy; Rainbow Energy Marketing Corporation

Federal Register 2010, 2011, 2012, 2013, 2014

2010-09-23

... DEPARTMENT OF ENERGY [OE Docket No. EA-375] Application To Export Electric Energy; Rainbow Energy Marketing Corporation AGENCY: Office of Electricity Delivery and Energy Reliability, DOE. ACTION: Notice of application. SUMMARY: Rainbow Energy Marketing Corporation (Rainbow) has applied for authority to transmit...

Transitional Gas Jet Diffusion Flames in Microgravity

NASA Technical Reports Server (NTRS)

Agrawal, Ajay K.; Alammar, Khalid; Gollahalli, S. R.; Griffin, DeVon (Technical Monitor)

2000-01-01

Drop tower experiments were performed to identify buoyancy effects in transitional hydrogen gas jet diffusion flames. Quantitative rainbow schlieren deflectometry was utilized to optically visualize the flame and to measure oxygen concentration in the laminar portion of the flame. Test conditions consisted of atmospheric pressure flames burning in quiescent air. Fuel from a 0.3mm inside diameter tube injector was issued at jet exit Reynolds numbers (Re) of 1300 to 1700. Helium mole percentage in the fuel was varied from 0 to 40%. Significant effects of buoyancy were observed in near field of the flame even-though the fuel jets were momentum-dominated. Results show an increase of breakpoint length in microgravity. Data suggest that transitional flames in earth-gravity at Re<1300 might become laminar in microgravity.

Genetic basis of differences in myxospore count between whirling disease-resistant and -susceptible strains of rainbow trout

USGS Publications Warehouse

Fetherman, Eric R.; Winkelman, Dana L.; Schisler, George J.; Antolin, Michael F.

2012-01-01

We used a quantitative genetics approach and estimated broad sense heritability (h2b) of myxospore count and the number of genes involved in myxospore formation to gain a better understanding of how resistance to Myxobolus cerebralis, the parasite responsible for whirling disease, is inherited in rainbow trout Oncorhynchus mykiss. An M. cerebralis-resistant strain of rainbow trout, the German Rainbow (GR), and a wild, susceptible strain of rainbow trout, the Colorado River Rainbow (CRR), were spawned to create 3 intermediate crossed populations (an F1 cross, F2 intercross, and a B2 backcross between the F1 and the CRR). Within each strain or cross, h2b was estimated from the between-family variance of myxospore counts using full-sibling families. Estimates of h2b and average myxospore counts were lowest in the GR strain, F1 cross, and F2 intercross (h2b = 0.34, 0.42, and 0.34; myxospores fish−1 = 275, 9566, and 45780, respectively), and highest in the B2 backcross and CRR strain (h2b = 0.93 and 0.89; myxospores fish−1 = 97865 and 187595, respectively). Comparison of means and a joint-scaling test suggest that resistance alleles arising from the GR strain are dominant to susceptible alleles from the CRR strain. Resistance was retained in the intermediate crosses but decreased as filial generation number increased (F2) or backcrossing occurred (B2). The estimated number of segregating loci responsible for differences in myxospore count in the parental strains was 9 ± 5. Our results indicate that resistance to M. cerebralis is a heritable trait within these populations and would respond to either artificial selection in hatcheries or natural selection in the wild.

Wide range instantaneous temperature measurements of convective fluid flows by using a schlieren system based in color images

NASA Astrophysics Data System (ADS)

Martínez-González, A.; Moreno-Hernández, D.; Monzón-Hernández, D.; León-Rodríguez, M.

2017-06-01

In the schlieren method, the deflection of light by the presence of an inhomogeneous medium is proportional to the gradient of its refractive index. Such deflection, in a schlieren system, is represented by light intensity variations on the observation plane. Then, for a digital camera, the intensity level registered by each pixel depends mainly on the variation of the medium refractive index and the status of the digital camera settings. Therefore, in this study, we regulate the intensity value of each pixel by controlling the camera settings such as exposure time, gamma and gain values in order to calibrate the image obtained to the actual temperature values of a particular medium. In our approach, we use a color digital camera. The images obtained with a color digital camera can be separated on three different color-channels. Each channel corresponds to red, green, and blue color, moreover, each one has its own sensitivity. The differences in sensitivity allow us to obtain a range of temperature values for each color channel. Thus, high, medium and low sensitivity correspond to green, blue, and red color channel respectively. Therefore, by adding up the temperature contribution of each color channel we obtain a wide range of temperature values. Hence, the basic idea in our approach to measure temperature, using a schlieren system, is to relate the intensity level of each pixel in a schlieren image to the corresponding knife-edge position measured at the exit focal plane of the system. Our approach was applied to the measurement of instantaneous temperature fields of the air convection caused by a heated rectangular metal plate and a candle flame. We found that for the metal plate temperature measurements only the green and blue color-channels were required to sense the entire phenomena. On the other hand, for the candle case, the three color-channels were needed to obtain a complete measurement of temperature. In our study, the candle temperature was took as

Quantitative trait loci for magnitude of the plasma cortisol response to confinement in rainbow trout.

PubMed

Quillet, E; Krieg, F; Dechamp, N; Hervet, C; Bérard, A; Le Roy, P; Guyomard, R; Prunet, P; Pottinger, T G

2014-04-01

Better understanding of the mechanisms underlying interindividual variation in stress responses and their links with production traits is a key issue for sustainable animal breeding. In this study, we searched for quantitative trait loci (QTL) controlling the magnitude of the plasma cortisol stress response and compared them to body size traits in five F2 full-sib families issued from two rainbow trout lines divergently selected for high or low post-confinement plasma cortisol level. Approximately 1000 F2 individuals were individually tagged and exposed to two successive acute confinement challenges (1 month interval). Post-stress plasma cortisol concentrations were determined for each fish. A medium density genome scan was carried out (268 markers, overall marker spacing less than 10 cM). QTL detection was performed using qtlmap software, based on an interval mapping method (http://www.inra.fr/qtlmap). Overall, QTL of medium individual effects on cortisol responsiveness (<10% of phenotypic variance) were detected on 18 chromosomes, strongly supporting the hypothesis that control of the trait is polygenic. Although a core array of QTL controlled cortisol concentrations at both challenges, several QTL seemed challenge specific, suggesting that responses to the first and to a subsequent exposure to the confinement stressor are distinct traits sharing only part of their genetic control. Chromosomal location of the steroidogenic acute regulatory protein (STAR) makes it a good potential candidate gene for one of the QTL. Finally, comparison of body size traits QTL (weight, length and body conformation) with cortisol-associated QTL did not support evidence for negative genetic relationships between the two types of traits. © 2014 Stichting International Foundation for Animal Genetics.

Status of the rainbow trout genome reference sequence assembly

USDA-ARS?s Scientific Manuscript database

Rainbow trout (Oncorhynchus mykiss) are the most cultivated cold water fish in the U.S. In addition to interests associated with aquaculture and sport fisheries, the rainbow trout serves as a model research organism for studies related to carcinogenesis, toxicology, comparative immunology, disease ...

Thermodynamics of charged dilatonic BTZ black holes in rainbow gravity

NASA Astrophysics Data System (ADS)

Dehghani, M.

2018-02-01

In this paper, the charged three-dimensional Einstein's theory coupled to a dilatonic field has been considered in the rainbow gravity. The dilatonic potential has been written as the linear combination of two Liouville-type potentials. Four new classes of charged dilatonic rainbow black hole solutions, as the exact solution to the coupled field equations of the energy dependent space time, have been obtained. Two of them are correspond to the Coulomb's electric field and the others are consequences of a modified Coulomb's law. Total charge and mass as well as the entropy, temperature and electric potential of the new charged black holes have been calculated in the presence of rainbow functions. Although the thermodynamic quantities are affected by the rainbow functions, it has been found that the first law of black hole thermodynamics is still valid for all of the new black hole solutions. At the final stage, making use of the canonical ensemble method and regarding the black hole heat capacity, the thermal stability or phase transition of the new rainbow black hole solutions have been analyzed.

Application of rainbow refractometry for measurement of droplets with solid inclusions

NASA Astrophysics Data System (ADS)

Li, Can; Wu, Xue-cheng; Cao, Jian-zheng; Chen, Ling-hong; Gréhan, Gerard; Cen, Ke-fa

2018-01-01

Characterization of droplets with solid inclusions is of great research interest and has wide industrial applications. Reported here is a theoretical and experimental investigation of the measurement of droplets with solid inclusions using rainbow refractometry. A rainbow extinction model of a droplet with solid inclusions was deduced based on Beer-Lambert's Law. It takes into account the volume concentration, relative size, scattering efficiency of the solid inclusion, and liquid refractive index. An acoustic levitation system for a single droplet and a global rainbow instrumentation system for spray were integrated to study the effect of the H2O-CaCO3 suspension droplets on the rainbow signal and the measured parameters. The results showed that the rainbow encountered unusual disturbances, introduced by the solid inclusions, but its overall structure was not destroyed. Discoveries also included that for volume concentrations of 2.5% or less the CaCO3 particles with diameters below 4 μm had little effect on the measured parameters of the host droplet. The extinction characteristic was also analyzed. The rainbow extinction model failed to quantity the volume concentration of CaCO3, but succeeded in its qualitative analysis.

Identification of differentially expressed genes of brown trout (Salmo trutta) and rainbow trout (Oncorhynchus mykiss) in response to Tetracapsuloides bryosalmonae (Myxozoa).

PubMed

Kumar, Gokhlesh; Abd-Elfattah, Ahmed; El-Matbouli, Mansour

2015-03-01

Tetracapsuloides bryosalmonae Canning et al., 1999 (Myxozoa) is the causative agent of proliferative kidney disease in various species of salmonids in Europe and North America. We have shown previously that the development and distribution of the European strain of T. bryosalmonae differs in the kidney of brown trout (Salmo trutta) Linnaeus, 1758 and rainbow trout (Oncorhynchus mykiss) Walbaum, 1792, and that intra-luminal sporogonic stages were found in brown trout but not in rainbow trout. We have now compared transcriptomes from kidneys of brown trout and rainbow trout infected with T. bryosalmonae using suppressive subtractive hybridization (SSH). The differentially expressed transcripts produced by SSH were cloned, transformed, and tested by colony PCR. Differential expression screening of PCR products was validated using dot blot, and positive clones having different signal intensities were sequenced. Differential screening and a subsequent NCBI-BLAST analysis of expressed sequence tags revealed nine clones expressed differently between both fish species. These differentially expressed genes were validated by quantitative real-time PCR of kidney samples from both fish species at different time points of infection. Expression of anti-inflammatory (TSC22 domain family protein 3) and cell proliferation (Prothymin alpha) genes were upregulated significantly in brown trout but downregulated in rainbow trout. The expression of humoral immune response (immunoglobulin mu) and endocytic pathway (Ras-related protein Rab-11b) genes were significantly upregulated in rainbow trout but downregulated in brown trout. This study suggests that differential expression of host anti-inflammatory, humoral immune and endocytic pathway responses, cell proliferation, and cell growth processes do not inhibit the development of intra-luminal sporogonic stages of the European strain of T. bryosalmonae in brown trout but may suppress it in rainbow trout.

Development of Background-Oriented Schlieren for NASA Langley Research Center Ground Test Facilities

NASA Technical Reports Server (NTRS)

Bathel, Brett F.; Borg, Stephen; Jones, Stephen; Overmeyer, Austin; Walker, Eric; Goad, William; Clem, Michelle; Schairer, Edward T.; Mizukaki, Toshiharu

2015-01-01

This paper provides an overview of recent wind tunnel tests performed at the NASA Langley Research Center where the Background-Oriented Schlieren (BOS) technique was used to provide information pertaining to flow-field density disturbances. The facilities in which the BOS technique was applied included the National Transonic Facility (NTF), Transonic Dynamics Tunnel (TDT), 31-Inch Mach 10 Air Tunnel, 15-Inch Mach 6 High-Temperature Air Tunnel, Rotor Test Cell at the 14 by 22 Subsonic Tunnel, and a 13-Inch Low-Speed Tunnel.

Kootenai River Fisheries Investigations; Rainbow and Bull Trout Recruitment, 2002-2003 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Walters, Jody P.

Rainbow trout Oncorhynchus mykiss provide the most important sport fishery in the Kootenai River, Idaho, but densities and catch rates are low. Low recruitment is one possible factor limiting the rainbow trout population. Bull trout Salvelinus confluentus also exist in the Kootenai River, but little is known about this population. Research reported here addresses the following objectives for the Kootenai River, Idaho: increase rainbow trout recruitment, identify rainbow and bull trout spawning tributaries and migration timing, establish baseline data on bull trout redd numbers in tributaries, and improve the rainbow trout population size structure. Six adult rainbow trout were movedmore » to spawning habitat upstream of a potential migration barrier on Caboose Creek, but numbers of redds and age-0 out-migrants did not appear to increase relative to a reference stream. Measurements taken on the Moyie River indicated the gradient is inadequate to deliver suitable flows to a proposed rainbow trout spawning channel. Summer water temperatures measured in the Deep Creek drainage sometimes exceeded 24 C, higher than those reported as suitable for rainbow trout. Radio-tagged rainbow trout were located in Boulder Creek during the spring spawning season, and bull trout were located in the Moyie River and O'Brien Creek, Montana in the fall. Bull trout spawning migration timing was related to increases in Kootenai River flows. Bull trout redd surveys documented 19 redds on Boulder Creek and North and South Callahan creeks. Fall 2002 electrofishing showed that the Kootenai River rainbow trout proportional stock density was 54, higher than prior years when more liberal fishing regulations were in effect. Boulder Creek produces the highest number of age-0 rainbow trout out-migrants upstream of Bonners Ferry, but the survival rate of these out-migrants upon reaching the Kootenai River is unknown. Determining juvenile survival rates and sources of mortality could aid management

Reassessment of the predatory effects of rainbow smelt on ciscoes in Lake Superior

USGS Publications Warehouse

Myers, Jared T.; Jones, Michael L.; Stockwell, Jason D.; Yule, Daniel L.

2009-01-01

Evidence from small lakes suggests that predation on larval ciscoes Coregonus artedi by nonnative rainbow smelt Osmerus mordax can lead to cisco suppression or extirpation. However, evidence from larger lakes has led to equivocal conclusions. In this study, we examine the potential predation effects of rainbow smelt in two adjacent but contrasting embayments in Lake Superior (Thunder and Black bays, Ontario). During May 2006, we sampled the ichthyoplankton, pelagic fish communities, and diet composition of rainbow smelt in both bays. Using acoustics and midwater trawling, we estimated rainbow smelt densities to be 476 ± 34/ha (mean ± SE) in Thunder Bay and 3,435 ± 460/ha in Black Bay. We used a bioenergetics model to estimate the proportion of cisco larvae consumed by rainbow smelt. Our results suggest that predation by rainbow smelt accounts for 15–52% and 37–100% of the mortality of larval ciscoes in Thunder and Black bays, respectively, depending on the predator feeding rate and the scale of predator–prey overlap. We also examined the sensitivity of past conclusions (based on 1974 field collections) to assumptions of temporal overlap between rainbow smelt and larval ciscoes and estimates of rainbow smelt abundance derived from bottom trawl samples. After adjusting these parameters to reflect current understanding, we found that the previous predation estimates may have been conservative. We conclude that rainbow smelt may have been a more important contributor to the demise and slow recovery of ciscoes in Lake Superior than previously thought.

Pricing geometric Asian rainbow options under fractional Brownian motion

NASA Astrophysics Data System (ADS)

Wang, Lu; Zhang, Rong; Yang, Lin; Su, Yang; Ma, Feng

2018-03-01

In this paper, we explore the pricing of the assets of Asian rainbow options under the condition that the assets have self-similar and long-range dependence characteristics. Based on the principle of no arbitrage, stochastic differential equation, and partial differential equation, we obtain the pricing formula for two-asset rainbow options under fractional Brownian motion. Next, our Monte Carlo simulation experiments show that the derived pricing formula is accurate and effective. Finally, our sensitivity analysis of the influence of important parameters, such as the risk-free rate, Hurst exponent, and correlation coefficient, on the prices of Asian rainbow options further illustrate the rationality of our pricing model.

Polarization-resolved simulations of multiple-order rainbows using realistic raindrop shapes

NASA Astrophysics Data System (ADS)

Haußmann, Alexander

2016-05-01

This paper presents selected results of a simulation study of the first five (primary-quinary) rainbow orders based on a realistic, size-dependent shape model for falling raindrops, taking into account that the drops' bottom part is flattened to higher degree than the dome-like top part. Moreover, broad drop size distributions are included in the simulations, as it is one goal of this paper to analyze, whether the predicted amplification and attenuation patterns for higher-order rainbows, as derived from previous simulations with monodisperse drop sizes, will still be pronounced under the conditions of natural rainfall. Secondly, deviations of the multiple rainbow orders' polarization state from the reference case of spherical drops are discussed. It is shown that each rainbow order may contain a small amount of circularly polarized light due to total internal reflections. Thirdly, it is investigated, how the conditions that generate twinned primary rainbows will affect the higher orders. For the simulations, geometric-optic ray tracing of the full Stokes vector as well as an approximate approach using appropriately shifted Debye series data is applied.

Comparison of rainbow smelt age estimates from fin rays and otoliths

USGS Publications Warehouse

Walsh, M.G.; Maloy, A.P.; O'Brien, T. P.

2008-01-01

Rainbow smelt Osmerus mordax, although nonnative, are an important component of the offshore food web in the Laurentian Great Lakes. In Lake Ontario, we estimate ages of rainbow smelt annually to study population dynamics such as year-class strength and age-specific growth and mortality. Since the early 1980s, we have used pectoral fin rays to estimate rainbow smelt ages, but the sectioning and mounting of fin rays are time and labor intensive. Our objective was to assess the feasibility of using otoliths rather than fin rays to estimate rainbow smelt ages. Three readers interpreted the ages of 172 rainbow smelt (60-198 mm total length) based on thin sections of pectoral fin rays, whole otoliths with no preparation, and whole otoliths that had been cleared for 1 month in a 70:30 ethanol : glycerin solution. Bias was lower and precision was greater for fin rays than for otoliths; these results were consistent for comparisons within readers (first and second readings by one individual; three readers were used) and between readers (one reading for each reader within a pair). Both otolith methods appeared to misclassify age-1 rainbow smelt. Fin ray ages had the highest precision and provided the best approximation of age estimates inferred from the Lake Ontario population's length frequency distribution and from our understanding of this population. ?? American Fisheries Society 2008.

Two Simple Activities to Bring Rainbows into the Classroom

ERIC Educational Resources Information Center

Isik, Hakan; Yurumezoglu, Kemal

2012-01-01

A rainbow reveals the colors of sunlight in a breathtaking way, but the formation of this natural event cannot be controlled by human beings. Transforming this out-of-class experience into a teaching activity is a challenge for science educators. This paper outlines two activities for rainbow formation in the science classroom in cases of good…

Rainbows, polarization, and the search for habitable planets.

PubMed

Bailey, Jeremy

2007-04-01

Current proposals for the characterization of extrasolar terrestrial planets rest primarily on the use of spectroscopic techniques. While spectroscopy is effective in detecting the gaseous components of a planet's atmosphere, it provides no way of detecting the presence of liquid water, the defining characteristic of a habitable planet. In this paper, I investigate the potential of an alternative technique for characterizing the atmosphere of a planet using polarization. By looking for a polarization peak at the "primary rainbow" scattering angle, it is possible to detect the presence of liquid droplets in a planet's atmosphere and constrain the nature of the liquid through its refractive index. Single scattering calculations are presented to show that a well-defined rainbow scattering peak is present over the full range of likely cloud droplet sizes and clearly distinguishes the presence of liquid droplets from solid particles such as ice or dust. Rainbow scattering has been used in the past to determine the nature of the cloud droplets in the Venus atmosphere and by the POLarization and Directionality of Earth Reflectances (POLDER) instrument to distinguish between liquid and ice clouds in the Earth atmosphere. While the presence of liquid water clouds does not guarantee the presence of water at the surface, this technique could complement spectroscopic techniques for characterizing the atmospheres of potential habitable planets. The disk-integrated rainbow peak for Earth is estimated to be at a degree of polarization of 12.7% or 15.5% for two different cloud cover scenarios. The observation of this rainbow peak is shown to be feasible with the proposed Terrestrial Planet Finder Coronograph mission in similar total integration times to those required for spectroscopic characterization.

Kootenai River Fisheries Investigations : Rainbow Trout Recruitment : Period Covered: 1997.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Downs, Chris

1999-02-02

The objective of this study was to determine if juvenile production is limiting the population of rainbow trout Oncorbynchus mykiss in the Idaho reach of the Kootenai River. We used snorkeling and electrofishing techniques to estimate juvenile rainbow trout abundance in, and outmigration from, the Deep, Boulder, and Myrtle creek drainages in Idaho. The total population estimates for the three drainages estimated in 1997 were 30,023; 763; and 235; respectively. A rotary-screw trap was utilized to capture juvenile outmigrants for quantification of age at outmigration and total outmigration from the Deep Creek drainage to the Kootenai River. The total outmigrantmore » estimate for 1997 from the Deep Creek drainage was 38,206 juvenile rainbow trout. Age determination based largely on scales suggests that most juvenile rainbow trout outmigration from the Deep Creek drainage occurs at age-l, during the spring runoff period. Forty-three adult rainbow trout captured in the Deep Creek drainage were tagged with $10.00 reward T-bar anchor tags in 1997. A total of three of these fish were harvested, all in Kootenay Lake, British Columbia. This suggests the possibility of an adfluvial component in the spawning population of the Deep Creek drainage.« less

Kootenai River Fisheries Investigations; Rainbow and Bull Trout Recruitment, 1999 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Walters, Jody P.; Downs, Christopher C.

2001-08-01

Our 1999 objectives were to determine sources of rainbow trout Oncorhynchus mykiss and bull trout Salvelinus confluentus spawning and recruitment in the Idaho reach of the Kootenai River. We used a rotary-screw trap to capture juvenile trout to determine age at out-migration and to estimate total out-migration from the Boundary Creek drainage to the Kootenai River. The out-migrant estimate for March through August 1999 was 1,574 (95% C. I. = 825-3,283) juvenile rainbow trout. Most juveniles out-migrated at age-2 and age-3. No out-migrating bull trout were caught. Five of 17 rainbow trout radio-tagged in Idaho migrated upstream into Montana watersmore » during the spawning season. Five bull trout originally radio-tagged in O'Brien Creek, Montana in early October moved downstream into Idaho and British Columbia by mid-October. Annual angler exploitation for the rainbow trout population upstream of Bonners Ferry, Idaho was estimated to be 58%. Multi-pass depletion estimates for index reaches of Caboose, Curley, and Debt creeks showed 0.20, 0.01, and 0.13 rainbow trout juveniles/m{sup 2}, respectively. We estimated rainbow trout (180-415 mm TL) standing stock of 1.6 kg/ha for the Hemlock Bar reach (29.4 ha) of the Kootenai River, similar to the 1998 estimate. Recruitment of juvenile rainbow and bull trout from Idaho tributaries is not sufficient to be the sole source of subsequent older fish in the mainstem Kootenai River. These populations are at least partly dependent on recruitment from Montana waters. The low recruitment and high exploitation rate may be indicators of a rainbow trout population in danger of further decline.« less

Ecological factors affecting Rainbow Smelt recruitment in the main basin of Lake Huron, 1976-2010

USGS Publications Warehouse

O'Brien, Timothy P.; Taylor, William W.; Roseman, Edward F.; Madenjian, Charles P.; Riley, Stephen C.

2014-01-01

Rainbow Smelt Osmerus mordax are native to northeastern Atlantic and Pacific–Arctic drainages and have been widely introduced throughout North America. In the Great Lakes region, Rainbow Smelt are known predators and competitors of native fish and a primary prey species in pelagic food webs. Despite their widespread distribution, importance as a prey species, and potential to negatively interact with native fish species, there is limited information concerning stock–recruitment relationships for Rainbow Smelt. To better understand recruitment mechanisms, we evaluated potential ecological factors determining recruitment dynamics for Rainbow Smelt in Lake Huron using data from bottom trawl catches. We specifically evaluated influence of stock size, environmental factors (water temperature, lake levels, and precipitation), and salmonine predation on the production of age-0 recruits from 1976 to 2010. Rainbow Smelt recruitment was negatively related to stock size exceeding 10 kg/ha, indicating that compensatory, density-dependent mortality from cannibalism or intraspecific competition was an important factor related to the production of age-0 recruits. Recruitment was positively related to spring precipitation suggesting that the amount of stream-spawning habitat as determined by precipitation was important for the production of strong Rainbow Smelt recruitment. Additionally, density of age-0 Rainbow Smelt was positively related to Lake Trout Salvelinus namaycush abundance. However, spawning stock biomass of Rainbow Smelt, which declined substantially from 1989 to 2010, was negatively associated with Lake Trout catch per effort suggesting predation was an important factor related to the decline of age-2 and older Rainbow Smelt in Lake Huron. As such, we found that recruitment of Rainbow Smelt in Lake Huron was regulated by competition with or cannibalism by older conspecifics, spring precipitation influencing stream spawning habitats, and predation by Lake Trout on

Red rainbows at sunset/sunrise

NASA Astrophysics Data System (ADS)

Ricard, J. L.

2016-12-01

The rainbow model deveeloped at CEPAL is based on the Airy theory. The outputs show that a pure red rainbow could only observed from a hill or a mountain when the sun is below the horizon. When the sun is on the horizon, there should be a juxtaposition of a red band on the outside and of a yellow band on the inside (upper figures). However, observers report pure red bows at sea level (lower left figure). In these rare cases, it is possible to still see the sun after it has set. As sunlight passes through more and more dense atmosphere at sunset the light slows and bends closer and closer toward the normal. When the eye traces the light ray it appears to be higher in the sky (lower right figure).

Rainbows and Rocket Engine

NASA Image and Video Library

2017-02-22

Rainbows and rocket engines – doesn’t get much better than that! Check out these gorgeous aerial views from today’s Space Launch System RS-25 engine test @NASA’s Stennis Space Center. PAO Name:Kim Henry Phone Number:256-544-1899 Email Address: kimberly.m.henry@nasa.gov

Color-coordinate system from a 13th-century account of rainbows.

PubMed

Smithson, Hannah E; Anderson, Philip S; Dinkova-Bruun, Greti; Fosbury, Robert A E; Gasper, Giles E M; Laven, Philip; McLeish, Tom C B; Panti, Cecilia; Tanner, Brian K

2014-04-01

We present a new analysis of Robert Grosseteste's account of color in his treatise De iride (On the Rainbow), dating from the early 13th century. The work explores color within the 3D framework set out in Grosseteste's De colore [see J. Opt. Soc. Am. A29, A346 (2012)], but now links the axes of variation to observable properties of rainbows. We combine a modern understanding of the physics of rainbows and of human color perception to resolve the linguistic ambiguities of the medieval text and to interpret Grosseteste's key terms.

Schlieren and OH* chemiluminescence imaging of combustion in a turbulent boundary layer over a solid fuel

NASA Astrophysics Data System (ADS)

Jens, Elizabeth T.; Miller, Victor A.; Cantwell, Brian J.

2016-03-01

Combustion in a turbulent boundary layer over a solid fuel is studied using simultaneous schlieren and OH* chemiluminescence imaging. The flow configuration is representative of a hybrid rocket motor combustor. Six different hydrocarbon fuels, including both classical hybrid rocket fuels and a high regression rate fuel (paraffin wax), are burned in an undiluted oxygen free-stream at pressures ranging from atmospheric to 1524.2 kPa (221.1 psi). A detailed explanation of methods for registering the schlieren and OH* chemiluminescence images to one another is presented, and additionally, details of the routines used to extract flow features of interest (like the boundary layer height and flame location) are provided. At atmospheric pressure, the boundary layer location is consistent between all fuels; however, the flame location varies for each fuel. The flame zone appears to be smoothly distributed over the fuel surface at atmospheric pressure. At elevated pressures and correspondingly increased Dahmköhler number (but at constant Reynolds number), flame morphology is markedly different, exhibiting large rollers in a shear layer above the fuel grain and finer structures in the flame. The chemiluminescence intensity is found to be roughly proportional to the fuel burn rate at both atmospheric and elevated chamber pressures.

Native rainbow smelt and nonnative alewife distribution related to temperature and light gradients in Lake Champlain

USGS Publications Warehouse

Parrish, Donna; Simonin, Paul W.; Rudstam, Lars G.; Sullivan, Patrick J.; Pientka, Bernard

2012-01-01

Alewife (Alosa pseudoharengus) recently became established in Lake Champlain and may compete with native rainbow smelt (Osmerus mordax) for food or consume larval rainbow smelt. The strength of this effect depends partly on the spatial and temporal overlap of different age groups of the two species; therefore, we need a better understanding of factors affecting alewife and rainbow smelt distributions in Lake Champlain. We used hydroacoustics, trawls, and gill nets to document vertical fish distribution, and recorded environmental data during 16 day–night surveys over two years. Temperature, temperature change, and light were all predictors of adult and age-0 rainbow smelt distribution, and temperature and light were predictors of age-0 alewives' distribution (based on GAMM models evaluated with AIC). Adult alewives were 5–30 m shallower and age-0 alewives were 2–15 m shallower than their rainbow smelt counterparts. Adult rainbow smelt distribution overlapped with age-0 rainbow smelt and age-0 alewives near the thermocline (10–25 m), whereas adult alewives were shallower (0–6 m) and overlapped with age-0 alewives and rainbow smelt in the epilimnion. Adult rainbow smelt were in water < 10–12 °C, whereas age-0 rainbow smelt were in 10–20 °C, and adult and age-0 alewives were in 15–22 °C water. Predicting these species distributions is necessary for quantifying the strength of predatory and competitive interactions between alewife and rainbow smelt, as well as between alewife and other fish species in Lake Champlain.

Similar genetic architecture with shared and unique quantitative trait loci for bacterial cold water disease resistance in two rainbow trout breeding populations

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD) causes significant mortality and economic losses in salmonid aquaculture. In previous studies, we identified moderate-large effect QTL for BCWD resistance in rainbow trout (Oncorhynchus mykiss). However, the recent availability of a 57K SNP array and a genome phys...

Buoyancy Effects on Flow Transition in Low-Density Inertial Gas Jets

NASA Technical Reports Server (NTRS)

Pasumarthi, Kasyap S.; Agrawal, Ajay K.

2005-01-01

Effects of buoyancy on transition from laminar to turbulent flow are presented for momentum-dominated helium jet injected into ambient air. The buoyancy was varied in a 2.2-sec drop tower facility without affecting the remaining operating parameters. The jet flow in Earth gravity and microgravity was visualized using the rainbow schlieren deflectometry apparatus. Results show significant changes in the flow structure and transition behavior in the absence of buoyancy.

Kootenai River Fisheries Investigations; Rainbow and Bull Trout Recruitment, 2003-2004 Annual Report.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Walters, Jody P.

2005-08-01

Rainbow trout Oncorhynchus mykiss provide the most important sport fishery in the Kootenai River, Idaho, but densities and catch rates are low. Low recruitment is one possible factor limiting the rainbow trout population. Bull trout Salvelinus confluentus also exist in the Kootenai River, but little is known about this population. Research reported here addresses the following objectives for the Kootenai River, Idaho: identify sources of rainbow and bull trout recruitment, monitor the rainbow trout population size structure to evaluate regulation changes initiated in 2002, and identify factors potentially limiting rainbow trout recruitment. A screw trap was used to estimate juvenilemore » redband and bull trout out-migration from the Callahan Creek drainage, and electrofishing was conducted to estimate summer densities of bull trout rearing in the Idaho portion of the drainage. An estimated 1,132 juvenile redband trout and 68 juvenile bull trout out-migrated from Callahan Creek to the Kootenai River from April 7 through July 15, 2003. Densities of bull trout {ge} age-1 in North and South Callahan creeks ranged from 1.6 to 7.7 fish/100m{sup 2} in August. Bull trout redd surveys were conducted in North and South Callahan creeks, Boulder Creek, and Myrtle Creek. Thirty-two bull trout redds were located in North Callahan Creek, while 10 redds were found in South Callahan Creek. No redds were found in the other two streams. Modeling of culverts in the Deep Creek drainage identified two as upstream migration barriers, preventing rainbow trout from reaching spawning and rearing habitat. Water temperature monitoring in Deep Creek identified two sites where maximum temperatures exceeded those suitable for rainbow trout. Boulder Creek produces the most rainbow trout recruits to the Kootenai River in Idaho upstream of Deep Creek, but may be below carrying capacity for rearing rainbow trout due to nutrient limitations. Monthly water samples indicate Boulder Creek is nutrient

Report on the Audit ot the Acquisition of the Tacit Rainbow Anti-Radiation Missile System

DTIC Science & Technology

1991-06-24

This is our final report on the audit of the Tacit Rainbow Anti-Radiation Missile System (Tacit Rainbow) for your information and use. We performed... the audit from March through December 1990. The audit objective was to evaluate the acquisition management of the air-launched Tacit Rainbow system to...contains no recommendations because DoD took action to cancel the Tacit Rainbow system in FY 1992. We are bringing the issues identified during the audit to

Movement of resident rainbow trout transplanted below a barrier to anadromy

USGS Publications Warehouse

Wilzbach, Margaret A.; Ashenfelter, Mark J.; Ricker, Seth J.

2012-01-01

We tracked the movement of resident coastal rainbow trout Oncorhynchus mykiss irideus that were experimentally transplanted below a migration barrier in a northern California stream. In 2005 and 2006, age-1 and older rainbow trout were captured above a 5-m-high waterfall in Freshwater Creek and individually marked with passive integrated transponder tags. Otolith microchemistry confirmed that the above-barrier trout were the progeny of resident rather than anadromous parents, and genetic analysis indicated that the rainbow trout were introgressed with cutthroat trout O. clarkii. At each of three sampling events, half of the tagged individuals (n = 22 and 43 trout in 2005 and 2006, respectively) were released 5 km downstream from the waterfall (approximately 10 km upstream from tidewater), and an equal number of tagged individuals were released above the barrier. Tagged individuals were subsequently relocated with stationary and mobile antennae or recaptured in downstream migrant traps, or both, until tracking ceased in October 2007. Most transplanted individuals remained within a few hundred meters of their release location. Three individuals, including one rainbow trout released above the waterfall, were last detected in the tidally influenced lower creek. Two additional tagged individuals released above the barrier were found alive in below-barrier reaches and had presumably washed over the falls. Two of seven tagged rainbow trout captured in downstream migrant traps had smolted and one was a presmolt. The smoltification of at least some individuals, coupled with above-barrier "leakage" of fish downstream, suggests that above-barrier resident trout have the potential to exhibit migratory behavior and to enter breeding populations of steelhead (anadromous rainbow trout) within the basin.

Black hole thermodynamics in Lovelock gravity's rainbow with (A)dS asymptote

NASA Astrophysics Data System (ADS)

Hendi, Seyed Hossein; Dehghani, Ali; Faizal, Mir

2017-01-01

In this paper, we combine Lovelock gravity with gravity's rainbow to construct Lovelock gravity's rainbow. Considering the Lovelock gravity's rainbow coupled to linear and also nonlinear electromagnetic gauge fields, we present two new classes of topological black hole solutions. We compute conserved and thermodynamic quantities of these black holes (such as temperature, entropy, electric potential, charge and mass) and show that these quantities satisfy the first law of thermodynamics. In order to study the thermal stability in canonical ensemble, we calculate the heat capacity and determinant of the Hessian matrix and show in what regions there are thermally stable phases for black holes. Also, we discuss the dependence of thermodynamic behavior and thermal stability of black holes on rainbow functions. Finally, we investigate the critical behavior of black holes in the extended phase space and study their interesting properties.

THz near-field spectral encoding imaging using a rainbow metasurface.

PubMed

Lee, Kanghee; Choi, Hyun Joo; Son, Jaehyeon; Park, Hyun-Sung; Ahn, Jaewook; Min, Bumki

2015-09-24

We demonstrate a fast image acquisition technique in the terahertz range via spectral encoding using a metasurface. The metasurface is composed of spatially varying units of mesh filters that exhibit bandpass features. Each mesh filter is arranged such that the centre frequencies of the mesh filters are proportional to their position within the metasurface, similar to a rainbow. For imaging, the object is placed in front of the rainbow metasurface, and the image is reconstructed by measuring the transmitted broadband THz pulses through both the metasurface and the object. The 1D image information regarding the object is linearly mapped into the spectrum of the transmitted wave of the rainbow metasurface. Thus, 2D images can be successfully reconstructed using simple 1D data acquisition processes.

Buoyancy Effects on Flow Transition in Hydrogen Gas Jet Diffusion Flames

NASA Technical Reports Server (NTRS)

Albers, Burt W.; Agrawal, Ajay K.; Griffin, DeVon (Technical Monitor)

2000-01-01

Experiments were performed in earth-gravity to determine how buoyancy affected transition from laminar to turbulent flow in hydrogen gas jet diffusion flames. The jet exit Froude number characterizing buoyancy in the flame was varied from 1.65 x 10(exp 5) to 1.14 x 10(exp 8) by varying the operating pressure and/or burner inside diameter. Laminar fuel jet was discharged vertically into ambient air flowing through a combustion chamber. Flame characteristics were observed using rainbow schlieren deflectometry, a line-of-site optical diagnostic technique. Results show that the breakpoint length for a given jet exit Reynolds number increased with increasing Froude number. Data suggest that buoyant transitional flames might become laminar in the absence of gravity. The schlieren technique was shown as effective in quantifying the flame characteristics.

Beyond the Rainbow: Retrieval Practice Leads to Better Spelling than Does Rainbow Writing

ERIC Educational Resources Information Center

Jones, Angela C.; Wardlow, Liane; Pan, Steven C.; Zepeda, Cristina; Heyman, Gail D.; Dunlosky, John; Rickard, Timothy C.

2016-01-01

In three experiments, we compared the effectiveness of rainbow writing and retrieval practice, two common methods of spelling instruction. In experiment 1 (n = 14), second graders completed 2 days of spelling practice, followed by spelling tests 1 day and 5 weeks later. A repeated measures analysis of variance demonstrated that spelling accuracy…

Comparative mapping reveals quantitative trait loci that affect spawning time in coho salmon (Oncorhynchus kisutch)

PubMed Central

Araneda, Cristian; Díaz, Nelson F.; Gomez, Gilda; López, María Eugenia; Iturra, Patricia

2012-01-01

Spawning time in salmonids is a sex-limited quantitative trait that can be modified by selection. In rainbow trout (Oncorhynchus mykiss), various quantitative trait loci (QTL) that affect the expression of this trait have been discovered. In this study, we describe four microsatellite loci associated with two possible spawning time QTL regions in coho salmon (Oncorhynchus kisutch). The four loci were identified in females from two populations (early and late spawners) produced by divergent selection from the same base population. Three of the loci (OmyFGT34TUF, One2ASC and One19ASC) that were strongly associated with spawning time in coho salmon (p < 0.0002) were previously associated with QTL for the same trait in rainbow trout; a fourth loci (Oki10) with a suggestive association (p = 0.00035) mapped 10 cM from locus OmyFGT34TUF in rainbow trout. The changes in allelic frequency observed after three generations of selection were greater than expected because of genetic drift. This work shows that comparing information from closely-related species is a valid strategy for identifying QTLs for marker-assisted selection in species whose genomes are poorly characterized or lack a saturated genetic map. PMID:22888302

Interferometric and schlieren characterization of the plasmas and shock wave dynamics during laser-triggered discharge in atmospheric air

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wei, Wenfu; Li, Xingwen, E-mail: xwli@mail.xjtu.edu.cn; Wu, Jian

2014-08-15

This paper describes our efforts to reveal the underlying physics of laser-triggered discharges in atmospheric air using a Mach-Zehnder interferometer and schlieren photography. Unlike the hemispherical shock waves that are produced by laser ablation, bell-like morphologies are observed during laser-triggered discharges. Phase shifts are recovered from the interferograms at a time of 1000 ns by the 2D fast Fourier transform method, and then the values of the refractive index are deduced using the Abel inversion. An abundance of free electrons is expected near the cathode surface. The schlieren photographs visualize the formation of stagnation layers at ∼600 ns in the interaction zonesmore » of the laser- and discharge-produced plasmas. Multiple reflected waves are observed at later times with the development of shock wave propagations. Estimations using the Taylor-Sedov self-similar solution indicated that approximately 45.8% and 51.9% of the laser and electrical energies are transferred into the gas flow motions, respectively. Finally, numerical simulations were performed, which successfully reproduced the main features of the experimental observations, and provided valuable insights into the plasma and shock wave dynamics during the laser-triggered discharge.« less

Making a Chemical Rainbow

ERIC Educational Resources Information Center

Angelin, Marcus; Ramstrom, Olof

2010-01-01

In this laboratory experiment, high school students are challenged to prepare a six-layered chemical "rainbow" in a test tube. Students start with six unknown, colorless liquids and six pigments ranging from violet to red. The experiment is problem based and forces the students to apply their knowledge of solubility and density and combine it with…

Effect of electric barrier on passage and physical condition of juvenile and adult rainbow trout

USGS Publications Warehouse

Layhee, Megan J.; Sepulveda, Adam; Shaw, Amy; Smuckall, Matthew; Kapperman, Kevin; Reyes, Alejandro

2016-01-01

Electric barriers can inhibit passage and injure fish. Few data exist on electric barrier parameters that minimize these impacts and on how body size affects susceptibility, especially to nontarget fish species. The goal of this study was to determine electric barrier voltage and pulse-width settings that inhibit passage of larger bodied rainbow trout Oncorhynchus mykiss (215–410 mm fork length) while allowing passage of smaller bodied juvenile rainbow trout (52–126 mm) in a static laboratory setting. We exposed rainbow trout to 30-Hz pulsed-direct current voltage gradients (0.00–0.45 V cm−1) and pulse widths (0.0–0.7 ms) and recorded their movement, injury incidence, and mortality. No settings tested allowed all juveniles to pass while impeding all adult passage. Juvenile and adult rainbow trout avoided the barrier at higher pulse widths, and fewer rainbow trout passed the barrier at 0.7-ms pulse width compared to 0.1 ms and when the barrier was turned off. We found no effect of voltage gradient on fish passage. No mortality occurred, and we observed external bruising in 5 (7%) juvenile rainbow trout and 15 (21%) adult rainbow trout. This study may aid managers in selecting barrier settings that allow for increased juvenile passage.

Schlieren imaging of loud sounds and weak shock waves in air near the limit of visibility

NASA Astrophysics Data System (ADS)

Hargather, Michael John; Settles, Gary S.; Madalis, Matthew J.

2010-02-01

A large schlieren system with exceptional sensitivity and a high-speed digital camera are used to visualize loud sounds and a variety of common phenomena that produce weak shock waves in the atmosphere. Frame rates varied from 10,000 to 30,000 frames/s with microsecond frame exposures. Sound waves become visible to this instrumentation at frequencies above 10 kHz and sound pressure levels in the 110 dB (6.3 Pa) range and above. The density gradient produced by a weak shock wave is examined and found to depend upon the profile and thickness of the shock as well as the density difference across it. Schlieren visualizations of weak shock waves from common phenomena include loud trumpet notes, various impact phenomena that compress a bubble of air, bursting a toy balloon, popping a champagne cork, snapping a wooden stick, and snapping a wet towel. The balloon burst, snapping a ruler on a table, and snapping the towel and a leather belt all produced readily visible shock-wave phenomena. In contrast, clapping the hands, snapping the stick, and the champagne cork all produced wave trains that were near the weak limit of visibility. Overall, with sensitive optics and a modern high-speed camera, many nonlinear acoustic phenomena in the air can be observed and studied.

Thermal fluctuations of dilaton black holes in gravity's rainbow

NASA Astrophysics Data System (ADS)

Dehghani, M.

2018-06-01

In this work, thermodynamics and phase transition of some new dilaton black hole solutions have been explored in the presence of the rainbow functions. By introducing an energy dependent space time, the dilaton potential has been obtained as the linear combination of two Liouville-type potentials and three new classes of black hole solutions have been constructed. The conserved and thermodynamic quantities of the new dilaton black holes have been calculated in the energy dependent space times. It has been shown that, even if some of the thermodynamic quantities are affected by the rainbow functions, the thermodynamical first law still remains valid. Also, the impacts of rainbow functions on the stability or phase transition of the new black hole solutions have been investigated. Finally, the quantum gravitational effects on the thermodynamics and phase transition of the solutions have been studied through consideration of the thermal fluctuations.

Classical theory of atom-surface scattering: The rainbow effect

NASA Astrophysics Data System (ADS)

Miret-Artés, Salvador; Pollak, Eli

2012-07-01

The scattering of heavy atoms and molecules from surfaces is oftentimes dominated by classical mechanics. A large body of experiments have gathered data on the angular distributions of the scattered species, their energy loss distribution, sticking probability, dependence on surface temperature and more. For many years these phenomena have been considered theoretically in the framework of the “washboard model” in which the interaction of the incident particle with the surface is described in terms of hard wall potentials. Although this class of models has helped in elucidating some of the features it left open many questions such as: true potentials are clearly not hard wall potentials, it does not provide a realistic framework for phonon scattering, and it cannot explain the incident angle and incident energy dependence of rainbow scattering, nor can it provide a consistent theory for sticking. In recent years we have been developing a classical perturbation theory approach which has provided new insight into the dynamics of atom-surface scattering. The theory includes both surface corrugation as well as interaction with surface phonons in terms of harmonic baths which are linearly coupled to the system coordinates. This model has been successful in elucidating many new features of rainbow scattering in terms of frictions and bath fluctuations or noise. It has also given new insight into the origins of asymmetry in atomic scattering from surfaces. New phenomena deduced from the theory include friction induced rainbows, energy loss rainbows, a theory of super-rainbows, and more. In this review we present the classical theory of atom-surface scattering as well as extensions and implications for semiclassical scattering and the further development of a quantum theory of surface scattering. Special emphasis is given to the inversion of scattering data into information on the particle-surface interactions.

Classical theory of atom-surface scattering: The rainbow effect

NASA Astrophysics Data System (ADS)

Miret-Artés, Salvador; Pollak, Eli

The scattering of heavy atoms and molecules from surfaces is oftentimes dominated by classical mechanics. A large body of experiments have gathered data on the angular distributions of the scattered species, their energy loss distribution, sticking probability, dependence on surface temperature and more. For many years these phenomena have been considered theoretically in the framework of the "washboard model" in which the interaction of the incident particle with the surface is described in terms of hard wall potentials. Although this class of models has helped in elucidating some of the features it left open many questions such as: true potentials are clearly not hard wall potentials, it does not provide a realistic framework for phonon scattering, and it cannot explain the incident angle and incident energy dependence of rainbow scattering, nor can it provide a consistent theory for sticking. In recent years we have been developing a classical perturbation theory approach which has provided new insight into the dynamics of atom-surface scattering. The theory includes both surface corrugation as well as interaction with surface phonons in terms of harmonic baths which are linearly coupled to the system coordinates. This model has been successful in elucidating many new features of rainbow scattering in terms of frictions and bath fluctuations or noise. It has also given new insight into the origins of asymmetry in atomic scattering from surfaces. New phenomena deduced from the theory include friction induced rainbows, energy loss rainbows, a theory of super-rainbows, and more. In this review we present the classical theory of atom-surface scattering as well as extensions and implications for semiclassical scattering and the further development of a quantum theory of surface scattering. Special emphasis is given to the inversion of scattering data into information on the particle-surface interactions.

77 FR 20375 - Application to Export Electric Energy; Rainbow Energy Marketing Corporation

Federal Register 2010, 2011, 2012, 2013, 2014

2012-04-04

... Energy Marketing Corporation AGENCY: Office of Electricity Delivery and Energy Reliability, DOE. ACTION: Notice of application. SUMMARY: Rainbow Energy Marketing Corporation (Rainbow) has applied to renew its... Energy Marketing Corporation, Kirkwood Office Tower, 919 South 7th Street, Suite 405, Bismarck, ND 58504...

Full-Scale Schlieren Visualization of Commercial Kitchen Ventilation Aerodynamics

NASA Astrophysics Data System (ADS)

Miller, J. D.; Settles, G. S.

1996-11-01

The efficient removal of cooking effluents from commercial kitchens has been identified as the most pressing energy-related issue in the food service industry. A full-scale schlieren optical system with a 2.1x2.7m field-of-view, described at previous APS/DFD meetings, images the convective airflow associated with a typical gas-fired cooking griddle and ventilation hood. Previous attempts to visualize plumes from cooking equipment by smoke and neutrally-buoyant bubbles were not sufficiently keyed to thermal convection. Here, the point where the ventilation hood fails to capture the effluent plume is clearly visible, thus determining the boundary condition for a balanced ventilation system. Further, the strong influence of turbulent entrainment is seen in the behavior of the combustion products vented by the griddle and the interference caused by a makeup-air outlet located too close to the lip of the ventilation hood. Such applications of traditional fluid dynamics techniques and principles are believed to be important to the maturing of ventilation technology. (Research supported by EPRI and IFMA, Inc.)

Brown Trout removal effects on short-term survival and movement of Myxobolus cerebralis-resistant rainbow trout

USGS Publications Warehouse

Fetherman, Eric R.; Winkelman, Dana L.; Bailey, Larissa L.; Schisler, George J.; Davies, K.

2015-01-01

Following establishment of Myxobolus cerebralis (the parasite responsible for salmonid whirling disease) in Colorado, populations of Rainbow Trout Oncorhynchus mykissexperienced significant declines, whereas Brown Trout Salmo trutta densities increased in many locations across the state, potentially influencing the success of M. cerebralis-resistant Rainbow Trout reintroductions. We examined the effects of Brown Trout removal on the short-term (3-month) survival and movement of two crosses of reintroduced, M. cerebralis-resistant Rainbow Trout in the Cache la Poudre River, Colorado. Radio frequency identification passive integrated transponder tags and antennas were used to track movements of wild Brown Trout and stocked Rainbow Trout in reaches where Brown Trout had or had not been removed. Multistate mark–recapture models were used to estimate tagged fish apparent survival and movement in these sections 3 months following Brown Trout removal. A cross between the German Rainbow Trout and Colorado River Rainbow Trout strains exhibited similar survival and movement probabilities in the reaches, suggesting that the presence of Brown Trout did not affect its survival or movement. However, a cross between the German Rainbow Trout and Harrison Lake Rainbow Trout exhibited less movement from the reach in which Brown Trout had been removed. Despite this, the overall short-term benefits of the removal were equivocal, suggesting that Brown Trout removal may not be beneficial for the reintroduction of Rainbow Trout. Additionally, the logistical constraints of conducting removals in large river systems are substantial and may not be a viable management option in many rivers.

RAINBOWS and CERAMBOWS: The Technologies of Pre-Stressed Piezo Actuators

NASA Technical Reports Server (NTRS)

Haertling, Gene H.

1996-01-01

Amplified mechanical displacement effects, similar to those observed in the recently reported Rainbow actuators, have also been found to exist in prestressed ceramic/metal composite structures coined as CERAMBOW's - an acronym for CERamic And Metal Biased Oxide Wafer. Mimicking the Rainbows in many ways, the intentionally created internal compressive and tensile stresses within the Cerambows are used to amplify their displacement properties via the combined effects of piezoelectric d31 strain and domain reorientation. They are fabricated from ferroelectric, piezoelectric or electrostrictive materials and metal substrates of significantly different thermal expansions which are largely responsible for the creation of the stress. Typical ceramics used in Cerambows are PZT, PLZT, PBZT, PSZT and PMN and some typical metal substrates are Al, Ag, Ni, brass, steel and Be/Cu foil. Shapes can vary from round disks to square plates and rectangular bars. Formed at an elevated temperature of approximately 250 C, the stresses on cooling to room temperature are generally sufficient to produce displacements as large as 0.125mm (5 mils) when activated unipolar and 0.25mm (10 mils) when operated bipolar at 450 volts in a dome mode. Comparing equal structures of a Cerambow with a Rainbow, the Cerambow was found to achieve approximately 70% of the displacement that would normally be obtained with a Rainbow. Although this difference in displacement is sufficient to prefer a Rainbow for many applications, there are some advantages for the Cerambow. Among these are (1) the processing temperatures are lower, (2) high lead-containing ceramics are not required and (3) in some instances the metal substrate is more convenient to interface with other elements of a device. However, the disadvantages include (1) lower displacement in the dome mode of operation, (2) the higher displacement saddle mode has not yet been demonstrated with a Cerambow and (3) the ceramic/metal bond interface is a

Somewhere in the Rainbow

NASA Technical Reports Server (NTRS)

1998-01-01

Aerometrics, Inc.'s Rainbow Refractometer was developed through an SBIR (Small Business Innovative Research) contract with Lewis Research Center. The system is a non- intrusive instrument for measuring droplet inside of refraction. It can also derive the temperature and chemical composition of refractive droplets. The technology can be integrated with the Phase Doppler Particle Analyzer systems (featured in Spinoff 1994) or used independently.

Experimental evaluation of size-dependent predation by adult post-spawned rainbow smelt (Osmerus mordax) on larval lake whitefish (Coregonus clupeaformis)

USGS Publications Warehouse

Zydlewski, Joseph D.; Gorsky, Dimitry

2013-01-01

Introduced landlocked Rainbow Smelt Osmerus mordax are hypothesized to be a major factor in the decline of Lake Whitefish Coregonus clupeaformis populations in many lakes. We sought to identify the size of Lake Whitefish preyed upon by adult Rainbow Smelt and how the efficiency of Rainbow Smelt predation changes Lake Whitefish ontogeny. In a laboratory setting, we exposed larval Lake Whitefish of increasing sizes to groups of seven Rainbow Smelt (>100 mm) for a 1-h period and observed predation behaviors and efficiencies. In each trial, the group of Rainbow Smelt consumed at least one larval Lake Whitefish, which were up to 45 mm in length (up to 89% of Rainbow Smelt gape width). Predation efficiency, the total number of Lake Whitefish consumed by Rainbow Smelt during trials, was 100% after Lake Whitefish hatching and followed a decreasing sigmoidal response to increasing lengths of Lake Whitefish. The apparent predatory window of Rainbow Smelt on Lake Whitefish is from Lake Whitefish size at hatch (∼12 mm) to approximately 34 mm. Rainbow Smelt generally required multiple attacks to capture a single Lake Whitefish. The capture efficiencies of Rainbow Smelt decreased from 30% as Lake Whitefish length increased and were highly variable within each Lake Whitefish size-group. The overall impact that Rainbow Smelt predation will have on Lake Whitefish populations is dependent on the growth rate of Lake Whitefish, environmental conditions that cause the Lake Whitefish hatching period to coincide with Rainbow Smelt spawning events, and the degree of overlap in habitat use between spawning Rainbow Smelt, nonspawning subadult Rainbow Smelt, and hatching Lake Whitefish.

Thermodynamics and luminosities of rainbow black holes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mu, Benrong; Wang, Peng; Yang, Haitang, E-mail: mubenrong@uestc.edu.cn, E-mail: pengw@scu.edu.cn, E-mail: hyanga@scu.edu.cn

2015-11-01

Doubly special relativity (DSR) is an effective model for encoding quantum gravity in flat spacetime. As result of the nonlinearity of the Lorentz transformation, the energy-momentum dispersion relation is modified. One simple way to import DSR to curved spacetime is ''Gravity's rainbow'', where the spacetime background felt by a test particle would depend on its energy. Focusing on the ''Amelino-Camelia dispersion relation'' which is E{sup 2} = m{sup 2}+p{sup 2}[1−η(E/m{sub p}){sup n}] with n > 0, we investigate the thermodynamical properties of a Schwarzschild black hole and a static uncharged black string for all possible values of η and n in the framework ofmore » rainbow gravity. It shows that there are non-vanishing minimum masses for these two black holes in the cases with η < 0 and n ≥ 2. Considering effects of rainbow gravity on both the Hawking temperature and radius of the event horizon, we use the geometric optics approximation to compute luminosities of a 2D black hole, a Schwarzschild one and a static uncharged black string. It is found that the luminosities can be significantly suppressed or boosted depending on the values of η and n.« less

Composition measurements of binary mixture droplets by rainbow refractometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wilms, J.; Weigand, B

2007-04-10

So far, refractive index measurements by rainbow refractometry have been used to determine the temperature of single droplets and ensembles of droplets. Rainbow refractometry is, for the first time, to the best of our knowledge, applied to measure composition histories of evaporating, binary mixture droplets. An evaluation method is presented that makes use of Airy theory and the simultaneous size measurement by Mie scattering imaging. The method further includes an empirical correction function for a certain diameter and refractive index range. The measurement uncertainty was investigated by numerical simulations with Lorenz-Mie theory. For the experiments, an optical levitation setup wasmore » used allowing for long measurement periods. Temperature measurements of single-component droplets at different temperature levels are shown to demonstrate the accuracy of rainbow refractometry. Measurements of size and composition histories of binary mixture droplets are presented for two different mixtures. Experimental results show good agreement with numerical results using a rapid-mixing model.« less

Composition measurements of binary mixture droplets by rainbow refractometry.

PubMed

Wilms, J; Weigand, B

2007-04-10

So far, refractive index measurements by rainbow refractometry have been used to determine the temperature of single droplets and ensembles of droplets. Rainbow refractometry is, for the first time, to the best of our knowledge, applied to measure composition histories of evaporating, binary mixture droplets. An evaluation method is presented that makes use of Airy theory and the simultaneous size measurement by Mie scattering imaging. The method further includes an empirical correction function for a certain diameter and refractive index range. The measurement uncertainty was investigated by numerical simulations with Lorenz-Mie theory. For the experiments, an optical levitation setup was used allowing for long measurement periods. Temperature measurements of single-component droplets at different temperature levels are shown to demonstrate the accuracy of rainbow refractometry. Measurements of size and composition histories of binary mixture droplets are presented for two different mixtures. Experimental results show good agreement with numerical results using a rapid-mixing model.

Changes in a population of exotic rainbow smelt in Lake Superior: Boom to bust, 1974-2005

USGS Publications Warehouse

Gorman, O.T.

2007-01-01

Changes in a population of rainbow smelt (Osmerus mordax) in the Apostle Islands region of Lake Superior were chronicled over a 32-yr time series, 1974–2005. At the beginning of the time series, rainbow smelt was the predominant prey species, abundance of lake herring (Coregonis artedi) was very low, and the dominant predator was stocked lake trout (Salvelinus namaycush). Following a period of successful lake trout stocking in the 1970s, the rainbow smelt population declined sharply in 1980, largely through mortality of adult fish and subsequent poor recruitment. In the succeeding 4 years, rainbow smelt populations reached historic low levels, resulting in reduced food resources for both wild and stocked lake trout. During 1985–1990 lake herring stocks began a spectacular recovery following the appearance of a very strong 1984 year class and subsequent 1988, 1989, and 1990 year classes. Rainbow smelt benefited from the high abundance of young lake herring as an alternate prey source for lake trout and showed a partial recovery in the late 1980s. However, a growing lake trout population coupled with an 8-yr period of low herring reproduction after 1990 resulted in a diminished rainbow smelt population dominated by age-1 and 2 fish and showing a pattern of alternating recruitment attributed to cannibalism. Low productivity of rainbow smelt and intermittent production of herring over the past decade has left lake trout populations with a diminished prey base. Although lake trout recovery benefited from the presence of rainbow smelt as a prey resource, the Lake Superior fish community was fundamentally altered by the introduction of rainbow smelt.

Growth rates of rainbow smelt in Lake Champlain: Effects of density and diet

USGS Publications Warehouse

Stritzel, Thomson J.L.; Parrish, D.L.; Parker-Stetter, S. L.; Rudstam, L. G.; Sullivan, P.J.

2011-01-01

Stritzel Thomson JL, Parrish DL, Parker-Stetter SL, Rudstam LG, Sullivan PJ. Growth rates of rainbow smelt in Lake Champlain: effects of density and diet. Ecology of Freshwater Fish 2010. ?? 2010 John Wiley & Sons A/S Abstract- We estimated the densities of rainbow smelt (Osmerus mordax) using hydroacoustics and obtained specimens for diet analysis and groundtruthed acoustics data from mid-water trawl sampling in four areas of Lake Champlain, USA-Canada. Densities of rainbow smelt cohorts alternated during the 2-year study; age-0 rainbow smelt were very abundant in 2001 (up to 6fish per m2) and age-1 and older were abundant (up to 1.2fish per m2) in 2002. Growth rates and densities varied among areas and years. We used model selection on eight area-year-specific variables to investigate biologically plausible predictors of rainbow smelt growth rates. The best supported model of growth rates of age-0 smelt indicated a negative relationship with age-0 density, likely associated with intraspecific competition for zooplankton. The next best-fit model had age-1 density as a predictor of age-0 growth. The best supported models (N=4) of growth rates of age-1 fish indicated a positive relationship with availability of age-0 smelt and resulting levels of cannibalism. Other plausible models were contained variants of these parameters. Cannibalistic rainbow smelt consumed younger conspecifics that were up to 53% of their length. Prediction of population dynamics for rainbow smelt requires an understanding of the relationship between density and growth as age-0 fish outgrow their main predators (adult smelt) by autumn in years with fast growth rates, but not in years with slow growth rates. ?? 2011 John Wiley & Sons A/S.

The Trouble with "Rainbow Boys"

ERIC Educational Resources Information Center

Crisp, Thomas

2008-01-01

Few pieces of GLBTQ fiction have received the popular and scholarly acclaim awarded to Alex Sanchez's "Rainbow Boys" series. Although "problem novels" are rarely taken seriously as literature, the books--the first novel in particular--have joined the few pieces of GLBTQ literature incorporated into educational discourse and curriculum. In this…

Quantum primary rainbows in transmission of positrons through very short carbon nanotubes

NASA Astrophysics Data System (ADS)

Ćosić, M.; Petrović, S.; Nešković, N.

2016-04-01

This paper is devoted to a quantum mechanical consideration of the transmission of positrons of a kinetic energy of 1 MeV through very short (11, 9) single-wall chiral carbon nanotubes. The nanotube lengths are between 50 and 320 nm. The transmission process is determined by the rainbow effects. The interaction potential of a positron and the nanotube is deduced from the Molire's interaction potential of the positron and a nanotube atom using the continuum approximation. We solve numerically the time-dependent Schrödinger equation, and calculate the spatial and angular distributions of transmitted positrons. The initial positron beam is assumed to be an ensemble of non-interacting Gaussian wave packets. We generate the spatial and angular distributions using the computer simulation method. The examination is focused on the spatial and angular primary rainbows. It begins with an analysis of the corresponding classical rainbows, and continues with a detailed investigation of the amplitudes and phases of the wave functions of transmitted positrons. These analyses enable one to identify the principal and supernumerary primary rainbows appearing in the spatial and angular distributions. They also result in a detailed explanation of the way of their generation, which includes the effects of wrinkling of each wave packet during its deflection from the nanotube wall, and of its concentration just before a virtual barrier lying close to the corresponding classical rainbow. The wrinkling of the wave packets occurs due to their internal focusing. In addition, the wave packets wrinkle in a mutually coordinated way. This explanation may induce new theoretical and experimental investigations of quantum rainbows occurring in various atomic collision processes.

Schlieren photographs and internal pressure distributions for three-dimensional sidewall-compression scramjet inlets at a Mach number of 6 in CF4

NASA Technical Reports Server (NTRS)

Holland, Scott D.

1993-01-01

Three-dimensional sidewall-compression scramjet inlets with leading-edge sweeps of 30 deg and 70 deg were tested in the Langley Hypersonic CF4 Tunnel at a Mach number of 6 and a free-stream ratio of specific heats of 1.2. The parametric effects of leading-edge sweep, cowl position, contraction ratio, and Reynolds number were investigated. The models were instrumented with static pressure orifices distributed on the sidewalls, baseplate, and cowl. Schlieren movies were made of selected tunnel runs for flow visualization of the entrance plane and cowl region. Although these movies could not show the internal flow, the effect of the internal flow on the external flow was evident by way of spillage. The purpose is to provide a preliminary data release for the investigation. The models, facility, and testing methods are described, and the test matrix and a tabulation of tunnel runs are provided. Line plots highlighting the stated parametric effects and a representative set of schlieren photographs are presented without analysis.

Rainbow Waterproofing and Restoration Co. Information Sheet

EPA Pesticide Factsheets

Rainbow Waterproofing and Restoration Co. (the Company) is located in San Francisco, California. The settlement involves renovation activities conducted at property constructed prior to 1978, located in San Francisco, California.

Characterization of the interferon genes in homozygous rainbow trout reveals two novel genes, alternate splicing and differential regulation of duplicated genes

USGS Publications Warehouse

Purcell, M.K.; Laing, K.J.; Woodson, J.C.; Thorgaard, G.H.; Hansen, J.D.

2009-01-01

The genes encoding the type I and type II interferons (IFNs) have previously been identified in rainbow trout and their proteins partially characterized. These previous studies reported a single type II IFN (rtIFN-??) and three rainbow trout type I IFN genes that are classified into either group I (rtIFN1, rtIFN2) or group II (rtIFN3). In this present study, we report the identification of a novel IFN-?? gene (rtIFN-??2) and a novel type I group II IFN (rtIFN4) in homozygous rainbow trout and predict that additional IFN genes or pseudogenes exist in the rainbow trout genome. Additionally, we provide evidence that short and long forms of rtIFN1 are actively and differentially transcribed in homozygous trout, and likely arose due to alternate splicing of the first exon. Quantitative reverse transcriptase PCR (qRT-PCR) assays were developed to systematically profile all of the rainbow trout IFN transcripts, with high specificity at an individual gene level, in na??ve fish and after stimulation with virus or viral-related molecules. Cloned PCR products were used to ensure the specificity of the qRT-PCR assays and as absolute standards to assess transcript abundance of each gene. All IFN genes were modulated in response to Infectious hematopoietic necrosis virus (IHNV), a DNA vaccine based on the IHNV glycoprotein, and poly I:C. The most inducible of the type I IFN genes, by all stimuli tested, were rtIFN3 and the short transcript form of rtIFN1. Gene expression of rtIFN-??1 and rtIFN-??2 was highly up-regulated by IHNV infection and DNA vaccination but rtIFN-??2 was induced to a greater magnitude. The specificity of the qRT-PCR assays reported here will be useful for future studies aimed at identifying which cells produce IFNs at early time points after infection. ?? 2008 Elsevier Ltd.

Full spatial-field visualization of gas temperature in an air micro-glow discharge by calibrated Schlieren photography

NASA Astrophysics Data System (ADS)

Xiong, Qing; Xu, Le; Wang, Xia; Xiong, Lin; Huang, Qinghua; Chen, Qiang; Wang, Jingang; Peng, Wenxiong; Li, Jiarui

2018-03-01

Gas temperature is an important basic parameter for both fundamental research and applications of plasmas. In this work, efforts were made to visualize the full spatial field of gas temperature (T g) in a microdischarge with sharp T g gradients by a method of calibrated Schlieren (CS) photography. Compared to other two typical diagnostic approaches, optical emission spectroscopy (OES) and Rayleigh scattering, the proposed CS method exhibits the ability to capture the whole field of gas temperature using a single Schlieren image, even the discharge is of non-luminous zones like Faraday dark space (FDS). The image shows that the T g field in the studied micro-glow air discharge expands quickly with the increase of discharge currents, especially in the cathode region. The two-dimensional maps of gas temperature display a ‘W-shape’ with sharp gradients in both areas of negative and positive glows, slightly arched distributions in the positive column, and cooling zones in the FDS. The obtained T g fields show similar patterns to that of the discharge luminance. With an increase in discharge currents, more electric energy is dissipated by heating air gas and inducing constriction of the low-temperature FDS. Except in the vicinities of electrode boundaries, due to the interference from optical diffraction, the estimated gas temperature distributions are of acceptable accuracy, confirmed by the approaches of OES and UV Rayleigh scattering.

Dispersal, mortality, and predation on recently-stocked rainbow trout in Dale Hollow Lake, Tennessee

USGS Publications Warehouse

Ivasauskas, Tomas J.; Bettoli, Phillip William

2011-01-01

Forty-four hatchery-raised rainbow trout (Oncorhynchus mykiss) were implanted with ultrasonic tags and stocked into Dale Hollow Lake, Tennessee, and tracked at least once per week for eight weeks to describe post-stocking dispersal rates, movements, and habitat use. Dispersal followed a three-stage pattern characterized by rapid movement away from each stocking site during the first week, relatively little dispersal during the next three weeks, and further dispersion during the final four weeks that fish were tracked. Rainbow trout exhibited a strong affinity for coves and were rarely encountered in the main channel. Tagged fish stocked in March exhibited lower mortality (Zweekly = 0.027) than those stocked in January (Zweekly = 0.062) during the first eight weeks post-stocking. Diets of potential predators in Dale Hollow Lake were examined. Walleye (Sander vitreus), smallmouth bass (Micropterus dolomieu), largemouth bass (M. salmoides), and holdover rainbow trout all preyed on recently stocked trout. Larger walleye were more likely to prey on stocked rainbow trout, and walleye of all sizes tended to prey on the smaller trout in each stocked cohort. Walleye were more likely to feed on rainbow trout during January than March. Effective stocking strategies should focus on reducing predation by stocking larger rainbow trout or by stocking when predation risk is minimized (i.e., March).

Quantum Tunneling from Apparent Horizon of Rainbow-FRW Universe

NASA Astrophysics Data System (ADS)

Lin, Kai; Yang, Shuzheng

2009-07-01

The quantum tunneling from the apparent horizon of rainbow-FRW universe is studied in this paper. We apply the semi-classical approximation, which is put forward by Parikh and Wilczek et al., to research on the scalar field particles tunneling from the apparent horizon of the rainbow-FRW universe, and then use the spin 1/2 Fermions tunneling theory, which brought forward by Kerner and Mann firstly, to research on the Fermions Hawking radiation via semi-classical approximation. Finally, we discuss the meanings of the quantum effect via Finsler geometry.

Application of Background Oriented Schlieren for Altitude Testing of Rocket Engines

NASA Technical Reports Server (NTRS)

Wernet, Mark P.; Stiegemeier, Benjamin R.

2017-01-01

A series of experiments was performed to determine the feasibility of using the Background Oriented Schlieren, BOS, flow visualization technique to image a simulated, small, rocket engine, plume under altitude test conditions. Testing was performed at the NASA Glenn Research Centers Altitude Combustion Stand, ACS, using nitrogen as the exhaust gas simulant. Due to limited optical access to the facility test capsule, all of the hardware required to conduct the BOS were located inside the vacuum chamber. During the test series 26 runs were performed using two different nozzle configurations with pressures in the test capsule around 0.3 psia. No problems were encountered during the test series resulting from the optical hardware being located in the test capsule and acceptable resolution images were captured. The test campaign demonstrated the ability of using the BOS technique for small, rocket engine, plume flow visualization during altitude testing.

Feeding periodicity, diet composition, and food consumption of subyearling rainbow trout in winter

USGS Publications Warehouse

Johnson, James H.; Chalupnicki, Marc; Abbett, Ross

2016-01-01

Although winter is a critically important period for stream salmonids, aspects of the ecology of several species are poorly understood. Consequently, we examined the diel feeding ecology of subyearling rainbow trout (Oncorhynchus mykiss) during winter in a central New York stream. Rainbow trout diet was significantly different during each 4-h interval and also differed from the drift and benthos. Feeding was significantly greater during darkness (i.e. 20:00 h – 04:00 h) than during daylight hours (i.e. 08:00 h – 16:00 h), peaking at 20:00 h. Daily food consumption (1.9 mg) and daily ration (3.4 %) during winter were substantially lower than previously reported for subyearling rainbow trout in the same stream during summer. These findings provide important new insights into the winter feeding ecology of juvenile rainbow trout in streams.

Rainbow: a tool for large-scale whole-genome sequencing data analysis using cloud computing.

PubMed

Zhao, Shanrong; Prenger, Kurt; Smith, Lance; Messina, Thomas; Fan, Hongtao; Jaeger, Edward; Stephens, Susan

2013-06-27

Technical improvements have decreased sequencing costs and, as a result, the size and number of genomic datasets have increased rapidly. Because of the lower cost, large amounts of sequence data are now being produced by small to midsize research groups. Crossbow is a software tool that can detect single nucleotide polymorphisms (SNPs) in whole-genome sequencing (WGS) data from a single subject; however, Crossbow has a number of limitations when applied to multiple subjects from large-scale WGS projects. The data storage and CPU resources that are required for large-scale whole genome sequencing data analyses are too large for many core facilities and individual laboratories to provide. To help meet these challenges, we have developed Rainbow, a cloud-based software package that can assist in the automation of large-scale WGS data analyses. Here, we evaluated the performance of Rainbow by analyzing 44 different whole-genome-sequenced subjects. Rainbow has the capacity to process genomic data from more than 500 subjects in two weeks using cloud computing provided by the Amazon Web Service. The time includes the import and export of the data using Amazon Import/Export service. The average cost of processing a single sample in the cloud was less than 120 US dollars. Compared with Crossbow, the main improvements incorporated into Rainbow include the ability: (1) to handle BAM as well as FASTQ input files; (2) to split large sequence files for better load balance downstream; (3) to log the running metrics in data processing and monitoring multiple Amazon Elastic Compute Cloud (EC2) instances; and (4) to merge SOAPsnp outputs for multiple individuals into a single file to facilitate downstream genome-wide association studies. Rainbow is a scalable, cost-effective, and open-source tool for large-scale WGS data analysis. For human WGS data sequenced by either the Illumina HiSeq 2000 or HiSeq 2500 platforms, Rainbow can be used straight out of the box. Rainbow is available

John Milton's Rainbow: Sonnet XIX.

ERIC Educational Resources Information Center

Scher, Amy

John Milton presented a wide spectrum of materials and ideas illuminating the literary landscape like a rainbow which critics and authors have been discussing for centuries. One example of the multiple layers of meaning in Milton's poems is found in Sonnet XIX, which can be useful for both forensic discussion as well as for composition…

The return of rainbow diet pills.

PubMed

Cohen, Pieter A; Goday, Alberto; Swann, John P

2012-09-01

The US Food and Drug Administration (FDA) has recently warned consumers about the risks of weight loss supplements adulterated with multiple pharmaceutical agents. Some of these supplements combine potent anorectics, such as amphetamines derivatives, with benzodiazepines, beta-blockers, and other medications to suppress the anorectics' adverse effects. These weight loss supplements represent the most recent generation of rainbow diet pills, named for their bright and varied colors, which date back more than 70 years. Beginning in the 1940s, several US pharmaceutical firms aggressively promoted rainbow pills to physicians and patients. By the 1960s the pills had caused dozens of deaths before the FDA began removing them from the US market. We used a variety of original resources to trace these deadly pills from their origins in the United States to their popularity in Spain and Brazil to their reintroduction to the United States as weight loss dietary supplements.

Students' Understanding of Cloud and Rainbow Formation and Teachers' Awareness of Students' Performance

ERIC Educational Resources Information Center

Malleus, Elina; Kikas, Eve; Kruus, Sigrid

2016-01-01

This study describes primary school students' knowledge about rainfall, clouds and rainbow formation together with teachers' predictions about students' performance. In our study, primary school students' (N = 177) knowledge about rainfall and rainbow formation was examined using structured interviews with open-ended questions. Primary school…

Growth, morphology, and developmental instability of rainbow trout, Yellowstone cutthroat trout, and four hybrid generations

USGS Publications Warehouse

Ostberg, C.O.; Duda, J.J.; Graham, J.H.; Zhang, S.; Haywood, K. P.; Miller, B.; Lerud, T.L.

2011-01-01

Hybridization of cutthroat trout Oncorhynchus clarkii with nonindigenous rainbow trout O. mykiss contributes to the decline of cutthroat trout subspecies throughout their native range. Introgression by rainbow trout can swamp the gene pools of cutthroat trout populations, especially if there is little selection against hybrids. We used rainbow trout, Yellowstone cutthroat trout O. clarkii bouvieri, and rainbow trout × Yellowstone cutthroat trout F1 hybrids as parents to construct seven different line crosses: F1 hybrids (both reciprocal crosses), F2 hybrids, first-generation backcrosses (both rainbow trout and Yellowstone cutthroat trout), and both parental taxa. We compared growth, morphology, and developmental instability among these seven crosses reared at two different temperatures. Growth was related to the proportion of rainbow trout genome present within the crosses. Meristic traits were influenced by maternal, additive, dominant, overdominant, and (probably) epistatic genetic effects. Developmental stability, however, was not disturbed in F1 hybrids, F2 hybrids, or backcrosses. Backcrosses were morphologically similar to their recurrent parent. The lack of developmental instability in hybrids suggests that there are few genetic incompatibilities preventing introgression. Our findings suggest that hybrids are not equal: that is, growth, development, character traits, and morphology differ depending on the genomic contribution from each parental species as well as the hybrid generation.

Monte Carlo Computer Simulation of a Rainbow.

ERIC Educational Resources Information Center

Olson, Donald; And Others

1990-01-01

Discusses making a computer-simulated rainbow using principles of physics, such as reflection and refraction. Provides BASIC program for the simulation. Appends a program illustrating the effects of dispersion of the colors. (YP)

A color coordinate system from a 13th century account of rainbows

PubMed Central

Smithson, Hannah E.; Anderson, Philip S.; Dinkova-Bruun, Greti; Fosbury, Robert A. E.; Gasper, Giles E. M.; Laven, Philip; McLeish, Tom C. B.; Panti, Cecilia; Tanner, Brian

2015-01-01

We present a new analysis of Robert Grosseteste’s account of color in his treatise De iride, On the Rainbow, dating from the early 13th century. The work explores color within the three-dimensional framework set out in Grosseteste’s De colore (see Smithson et al, 2012, A three-dimensional color space from the 13th century.” Journal of the Optical Society of America (A), 29 (2), A346-A352), but now links the axes of variation to observable properties of rainbows. We combine a modern understanding of the physics of rainbows and of human color perception to resolve the linguistic ambiguities of the medieval text and to interpret Grosseteste’s key terms. PMID:24695192

Experiments on the effects of nanoparticles on subcooled nucleate pool boiling

NASA Astrophysics Data System (ADS)

Kangude, Prasad; Bhatt, Dhairya; Srivastava, Atul

2018-05-01

The effect of nanoparticles on a single bubble-based nucleate pool boiling phenomenon under subcooled conditions has been studied. Water (as the base fluid) and two different concentrations of water-silica nanofluids (0.005% and 0.01% V/V) have been employed as the working fluids. The boiling experiments have been conducted in a specially designed chamber, wherein an ITO-coated heater substrate has been used to induce single bubble nucleation. Measurements have been performed in a completely non-intrusive manner using one of the refractive index-based diagnostics techniques, namely, rainbow schlieren deflectometry. Thus, the thermal gradients prevailing in the boiling chamber have directly been mapped as a two-dimensional distribution of hue values that are recorded in the form of rainbow schlieren images. The schlieren-based measurements clearly revealed the plausible influence of nanoparticles on the strength of temperature gradients prevailing in the boiling chamber. As compared to the base fluid, the experiments with dilute nanofluids showed that the suspended nanoparticles tend to diffuse (homogenize) the strength of temperature gradients, both in the vicinity of the heated substrate and in the thermal boundary layer enveloping the vapor bubble. An overall reduction in the bubble volume and dynamic contact angle was seen with increasing concentrations of dilute nanofluids. In addition, the vapor bubble was found to assume a more spherical shape at higher concentrations of dilute nanofluids in comparison to its shape with water-based experiments. Clear oscillations of the vapor bubble in the subcooled pool of liquids (water and/or nanofluids) were observed, the frequency of which was found to be significantly reduced as the nanoparticle concentration was increased from 0% (water) to 0.01% (V/V). A force balance analysis has been performed to elucidate the plausible mechanisms explaining the observed trends of the oscillation frequencies of the vapor bubble.

Virulence and molecular variation of Flavobacterium columnare affecting rainbow trout in ID, USA

USDA-ARS?s Scientific Manuscript database

Columnaris disease is an emerging problem in the rainbow trout (Oncorhychus mykiss) aquaculture industry of Idaho. The epidemiology of this pathogen in the area, and for rainbow trout, is all isolates taken from disease outbreaks are genomovar I and similar based on basic typing protocols. Virulence...

High-Speed Schlieren and 10-Hz Kr PLIF for the new AFRL Mach-6 Ludwieg Tube Hypersonic Wind Tunnel

DTIC Science & Technology

2017-11-01

STATES AIR FORCE AFRL-RQ-WP-TP-2017-0167 HIGH -SPEED SCHLIEREN AND 10-HZ KR PLIF FOR THE NEW AFRL MACH 6 LUDWIEG TUBE HYPERSONIC WIND TUNNEL Roger...L. Kimmel and Campbell D. Carter Hypersonic Sciences Branch High Speed Systems Division Joshua D. Pickles and Venkateswaran Narayanaswamy North...Public Affairs Office (PAO) and is available to the general public, including foreign nationals. Copies may be obtained from the Defense Technical

Ebb and flow of encroachment by nonnative rainbow trout in a small stream in the southern Appalachian Mountains

USGS Publications Warehouse

Larson, Gary L.; Moore, S.E.

1995-01-01

Brook trout Salvelinus fontinalis is the native salmonid species of streams in the southern Appalachian Mountains. The present distribution of this species, once widespread from headwaters to lower reaches of large streams, is restricted to mostly headwater areas. Changes in the distribution of native brook trout in the presence of' nonnative rainbow trout Oncorhynchus mykiss have been documented in Great Smoky Mountains National Park. When rainbow trout were first found in a tributary (Rock Creek) in the park in 1979, a study was begun to assess changes through time in distribution and abundance of rainbow trout in Rock Creek and to compare the brook trout and rainbow trout associations in Rock Creek with associations found in other park streams. Abundance of brook trout was low in the downstream sections of Rock Creek in 1979a??1993. Brook trout abundance was highest in the steep-gradient, pool-dominated headwater section which was only 2 km from the confluence of Rock Creek and Cosby Creek. Rainbow trout were present in low densities in Rock Creek during the same period. Although rainbow trout were most abundant in the lower stream sections and never found in the headwater section, adult and age-0 rainbow trout were found in the middle section in 1988. Rainbow trout were absent in the middle section in 1991, but one large adult rainbow trout was present in the section in 1992 and 1993. Floods, freshets, and periods of low stream discharge appeared to play an important role in the distribution and population structure of rainbow trout in Rock Creek. The lower portion of Rock Creek was poor trout habitat because the sections were dominated by cobblea??rubble substrate and shallow riffle areas. Stream habitat appeared to be better suited for brook trout than for rainbow trout in the steep-gradient upstream sections which were dominated by boulder-cobble substrate and deep pools. The results of this study suggest that encroachment by rainbow trout can exhibit

Quality assessment of rainbow trout (Oncorhynchus mykiss) fillets during super chilling and chilled storage.

PubMed

Shen, Song; Jiang, Yan; Liu, Xiaochang; Luo, Yongkang; Gao, Liang

2015-08-01

In order to evaluate the effect of super chilling (-3 °C) and chilled (3 °C) storage on the quality of rainbow trout fillets, total volatile base nitrogen (TVB-N), drip loss, pH, electric conductivity (EC), total aerobic count (TAC), K and related values, adenosine triphosphate (ATP) and related compounds, color and sensory score were determined and correlation between these indicators were analyzed. According to the comprehensive evaluation of TAC, K value and sensory score, the limit for acceptability of rainbow trout fillets was 5 days at 3 °C and 11 days at -3 °C. Additionally, the correlation coefficients between TVB-N and other freshness indicators (TAC, K value, sensory score) were relatively low. TVB-N may be inadequate for evaluating freshness changes of rainbow trout fillets compared with other indicators. Among the K and related values, H value was a better freshness indicator in rainbow trout fillets during chilled and super chilling storage for its better correlation coefficients with other freshness indicators. Super chilling storage could extend the shelf life of rainbow trout fillets by 6 days compared to chilled storage.

A metasurface-based prism analogue for terahertz rainbow spectrum manipulation

NASA Astrophysics Data System (ADS)

Zheng, Shen; Li, Chao; Li, Shichao; Zhang, Xiaojuan; Fang, Guangyou

2017-06-01

Optical prisms can spread compound light spatially into a rainbow and have widespread applications in spectroscopy and imaging. Limited by the natural materials as well as technologies, there has been no natural counterpart of the optical prism that works in the Terahertz (THz) band so far. In this letter, a THz prism analogue based on metasurfaces working in the transmission diffraction mechanism is first proposed to generate the THz rainbow spectrum. The physics of different modes excited by the interaction between the incident wave and the metasurface is investigated in theory and simulation. A coherent enhancement method was developed to improve the mode competition of the rainbow spectrum over other unwanted leaky modes to guarantee the high transfer efficiency of the wavelength dependent transmission diffraction. The experimental results show that the prism analogue can spread the incident spectrum from 0.15 to 0.22 THz in an angular scope of about 30.8° with comparatively high transferring efficiency.

Spray formation of biodiesel-water in air-assisted atomizer using Schlieren photography

NASA Astrophysics Data System (ADS)

Amirnordin, S. H.; Khalid, A.; Sapit, A.; Salleh, H.; Razali, A.; Fawzi, M.

2016-11-01

Biodiesels are attractive renewable energy sources, particularly for industrial boiler and burner operators. However, biodiesels produce higher nitrogen oxide (NOx) emissions compared with diesel. Although water-emulsified fuels can lower NOx emissions by reducing flame temperature, its influence on atomization needs to be investigated further. This study investigates the effects of water on spray formation in air-assisted atomizers. The Schlieren method was used to capture the spray images in terms of tip penetration, spray angle, and spray area. The experiment used palm oil biodiesel at different blending ratios (B5, B10, and B15) and water contents (0vol%-15vol%). Results show that water content in the fuel increases the spray penetration and area but reduces the spray angle because of the changes in fuel properties. Therefore, biodiesel-water application is applicable to burner systems.

Rainbow Plasmonic Nanobubbles: Synergistic Activation of Gold Nanoparticle Clusters

PubMed Central

Lukianova-Hleb, Ekaterina Y; Oginsky, Alexander O; Shenefelt, Derek L; Drezek, Rebekah A; Hafner, Jason H; Farach-Carson, Mary C; Lapotko, Dmitri O

2011-01-01

The synergistic physical and biological effects of selective targeting and activation of plasmonic nanoparticles were studied for a transient vapor nanobubble mode. Simultaneous optical activation of two plasmon resonances in multi-nanoparticle clusters significantly improved the selectivity and efficacy of the nanobubble generation through and was termed “rainbow plasmonic nanobubbles.” The rainbow nanobubble mechanism has been studied in water and in living cells in vitro. This mechanism provided maximal selectivity of the nanobubble generation in both models and therefore, can the therapeutic selectivity and optical contrast of gold nanoparticles in a heterogeneous physiological microenvironment at cell level. PMID:21804947

Infection experiments with novel Piscine orthoreovirus from rainbow trout (Oncorhynchus mykiss) in salmonids

PubMed Central

Taksdal, Torunn; Olsen, Anne Berit; Wessel, Øystein; Mikkelsen, Susie Sommer; Alencar, Anna Luiza Farias; Olesen, Niels Jørgen

2017-01-01

A new disease in farmed rainbow trout (Onchorhyncus mykiss) was described in Norway in 2013. The disease mainly affected the heart and resembled heart and skeletal muscle inflammation (HSMI) in Atlantic salmon (Salmo salar L.). HSMI is associated with Piscine orthoreovirus (PRV), and a search for a similar virus in the diseased rainbow trout led to detection of a sequence with 85% similarity to PRV. This finding called for a targeted effort to assess the risk the new PRV-variant pose on farmed rainbow trout and Atlantic salmon by studying infection and disease pathogenesis, aiming to provide more diagnostic knowledge. Based on the genetic relationship to PRV, the novel virus is referred to as PRV-Oncorhynchus mykiss (PRV-Om) in contrast to PRV-Salmo salar (PRV-Ss). In experimental trials, intraperitoneally injected PRV-Om was shown to replicate in blood in both salmonid species, but more effectively in rainbow trout. In rainbow trout, the virus levels peaked in blood and heart of cohabitants 6 weeks post challenge, along with increased expression of antiviral genes (Mx and viperin) in the spleen, with 80–100% of the cohabitants infected. Heart inflammation was diagnosed in all cohabitants examined 8 weeks post challenge. In contrast, less than 50% of the Atlantic salmon cohabitants were infected between 8 and 16 weeks post challenge and the antiviral response in these fish was very low. From 12 weeks post challenge and onwards, mild focal myocarditis was demonstrated in a few virus-positive salmon. In conclusion, PRV-Om infects both salmonid species, but faster transmission, more notable antiviral response and more prominent heart pathology were observed in rainbow trout. PMID:28678799

The Return of Rainbow Diet Pills

PubMed Central

Cohen, Pieter A.; Goday, Alberto; Swann, John P.

2012-01-01

The US Food and Drug Administration (FDA) has recently warned consumers about the risks of weight loss supplements adulterated with multiple pharmaceutical agents. Some of these supplements combine potent anorectics, such as amphetamines derivatives, with benzodiazepines, beta-blockers, and other medications to suppress the anorectics’ adverse effects. These weight loss supplements represent the most recent generation of rainbow diet pills, named for their bright and varied colors, which date back more than 70 years. Beginning in the 1940s, several US pharmaceutical firms aggressively promoted rainbow pills to physicians and patients. By the 1960s the pills had caused dozens of deaths before the FDA began removing them from the US market. We used a variety of original resources to trace these deadly pills from their origins in the United States to their popularity in Spain and Brazil to their reintroduction to the United States as weight loss dietary supplements. PMID:22813089

Comparison of heavy metal levels of farmed and escaped farmed rainbow trout and health risk assessment associated with their consumption.

PubMed

Varol, Memet; Sünbül, Muhammet Raşit

2017-10-01

In this study, levels of ten metals (arsenic, cadmium, cobalt, chromium, copper, iron, manganese, nickel, lead, and zinc) in muscles of farmed and escaped farmed rainbow trout (Oncorhynchus mykiss) in the Keban Dam Reservoir (Turkey) were determined. Also, human health risks associated with their consumption were assessed. Of ten metals, only Co and Fe levels in escaped rainbow trout were significantly higher than those in farmed rainbow trout. The metal levels in farmed and escaped rainbow trout were below the maximum permissible limits. The estimated daily intake (EDI) of each metal in both farmed and escaped farmed rainbow trout was much lower than the respective tolerable daily intake (TDI). The target hazard quotient (THQ) values for individual metal and the total THQ values for combined metals were lower than 1 in both farmed and escaped rainbow trout, indicating no health risk for humans. The cancer risk (CR) values estimated for inorganic As in both farmed and escaped rainbow trout indicated low carcinogenic risk to the consumers. According to the maximum allowable monthly consumption limits (CR mm) , adults may safely consume 24 meals of farmed rainbow trout per month or 39 meals of escaped rainbow trout per month, with minimal adverse carcinogenic and non-carcinogenic health effects. This study revealed that the risk from consuming farmed and escaped farmed rainbow trout in the Keban Dam Reservoir due to these trace elements is minimal.

Transforming White Light into Rainbows: Segmentation Strategies for Successful School Tax Elections

ERIC Educational Resources Information Center

Senden, J. Bradford; Lifto, Don E.

2009-01-01

In the late 1600s, British physicist Sir Isaac Newton first demonstrated refraction and dispersion in a triangular prism. He discovered that a prism could decompose white light into a spectrum. Hold a prism up to the light at the correct angle and white light magically splits into vivid colors of the rainbow! So what do prisms and rainbows have to…

Tissue astaxanthin and canthaxanthin distribution in rainbow trout (Oncorhynchus mykiss) and Atlantic salmon (Salmo salar).

PubMed

Page, G I; Davies, S J

2006-01-01

A comparative investigation of tissue carotenoid distribution between rainbow trout, Oncorhynchus mykiss, and Atlantic salmon, Salmo salar, was undertaken to identify the relative efficiency of utilization of astaxanthin and canthaxanthin. Higher apparent digestibility coefficients (ADCs) (96% in trout vs. 28-31% in salmon; P<0.05), and pigment retention efficiencies (11.5-12.5% in trout vs. 5.5% in salmon; P<0.05), for both astaxanthin and canthaxanthin, were observed for rainbow trout. Astaxanthin deposition was higher than canthaxanthin in rainbow trout, while the reverse was true for Atlantic salmon, suggesting species-specificity in carotenoid utilization. The white muscle (95% in trout vs. 93% in salmon) and kidneys (0.5% in trout vs. 0.2% in salmon) represented higher proportions of the total body carotenoid pool in rainbow trout than in Atlantic salmon (P<0.05), whereas the liver was a more important storage organ in Atlantic salmon (2-6% in salmon vs. 0.2% in trout; P<0.05). The liver and kidney appeared to be important sites of carotenoid catabolism based on the relative proportion of the peak chromatogram of the fed carotenoid in both species, with the pyloric caecae and hind gut being more important in Atlantic salmon than in the rainbow trout. Liver catabolism is suspected to be a critical determinant in carotenoid clearance, with higher catabolism expected in Atlantic salmon than in rainbow trout.

Alpha particle condensation in {sup 12}C and nuclear rainbow scattering

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ohkubo, S.; Hirabayashi, Y.

2008-05-12

It is shown that the large radius of the Hoyle state of {sup 12}C with a dilute density distribution in an {alpha} particle condensate can be clearly seen in the shift of the rainbow angle (therefore the Airy minimum) to a larger angle in {alpha}+{sup 12}C rainbow scattering at the high energy region and prerainbow oscillations in {sup 3}He+{sup 12}C scattering at the lower energy region.

Rainbow: a tool for large-scale whole-genome sequencing data analysis using cloud computing

PubMed Central

2013-01-01

Background Technical improvements have decreased sequencing costs and, as a result, the size and number of genomic datasets have increased rapidly. Because of the lower cost, large amounts of sequence data are now being produced by small to midsize research groups. Crossbow is a software tool that can detect single nucleotide polymorphisms (SNPs) in whole-genome sequencing (WGS) data from a single subject; however, Crossbow has a number of limitations when applied to multiple subjects from large-scale WGS projects. The data storage and CPU resources that are required for large-scale whole genome sequencing data analyses are too large for many core facilities and individual laboratories to provide. To help meet these challenges, we have developed Rainbow, a cloud-based software package that can assist in the automation of large-scale WGS data analyses. Results Here, we evaluated the performance of Rainbow by analyzing 44 different whole-genome-sequenced subjects. Rainbow has the capacity to process genomic data from more than 500 subjects in two weeks using cloud computing provided by the Amazon Web Service. The time includes the import and export of the data using Amazon Import/Export service. The average cost of processing a single sample in the cloud was less than 120 US dollars. Compared with Crossbow, the main improvements incorporated into Rainbow include the ability: (1) to handle BAM as well as FASTQ input files; (2) to split large sequence files for better load balance downstream; (3) to log the running metrics in data processing and monitoring multiple Amazon Elastic Compute Cloud (EC2) instances; and (4) to merge SOAPsnp outputs for multiple individuals into a single file to facilitate downstream genome-wide association studies. Conclusions Rainbow is a scalable, cost-effective, and open-source tool for large-scale WGS data analysis. For human WGS data sequenced by either the Illumina HiSeq 2000 or HiSeq 2500 platforms, Rainbow can be used straight out of

Genetic and transcriptomic analyses provide new insights on the early antiviral response to VHSV in resistant and susceptible rainbow trout.

PubMed

Verrier, Eloi R; Genet, Carine; Laloë, Denis; Jaffrezic, Florence; Rau, Andrea; Esquerre, Diane; Dechamp, Nicolas; Ciobotaru, Céline; Hervet, Caroline; Krieg, Francine; Jouneau, Luc; Klopp, Christophe; Quillet, Edwige; Boudinot, Pierre

2018-06-19

The viral hemorrhagic septicemia virus (VHSV) is a major threat for salmonid farming and for wild fish populations worldwide. Previous studies have highlighted the importance of innate factors regulated by a major quantitative trait locus (QTL) for the natural resistance to waterborne VHSV infection in rainbow trout. The aim of this study was to analyze the early transcriptomic response to VHSV inoculation in cell lines derived from previously described resistant and susceptible homozygous isogenic lines of rainbow trout to obtain insights into the molecular mechanisms responsible for the resistance to the viral infection. We first confirmed the presence of the major QTL in a backcross involving a highly resistant fish isogenic line (B57) and a highly susceptible one (A22), and were able to define the confidence interval of the QTL and to identify its precise position. We extended the definition of the QTL since it controls not only resistance to waterborne infection but also the kinetics of mortality after intra-peritoneal injection. Deep sequencing of the transcriptome of B57 and A22 derived cell lines exposed to inactivated VHSV showed a stronger response to virus inoculation in the resistant background. In line with our previous observations, an early and strong induction of interferon and interferon-stimulated genes was correlated with the resistance to VHSV, highlighting the major role of innate immune factors in natural trout resistance to the virus. Interestingly, major factors of the antiviral innate immunity were much more expressed in naive B57 cells compared to naive A22 cells, which likely contributes to the ability of B57 to mount a fast antiviral response after viral infection. These observations were further extended by the identification of several innate immune-related genes localized close to the QTL area on the rainbow trout genome. Taken together, our results improve our knowledge in virus-host interactions in vertebrates and provide novel

MicroTrout: A comprehensive, genome-wide miRNA target prediction framework for rainbow trout, Oncorhynchus mykiss.

PubMed

Mennigen, Jan A; Zhang, Dapeng

2016-12-01

Rainbow trout represent an important teleost research model and aquaculture species. As such, rainbow trout are employed in diverse areas of biological research, including basic biological disciplines such as comparative physiology, toxicology, and, since rainbow trout have undergone both teleost- and salmonid-specific rounds of genome duplication, molecular evolution. In recent years, microRNAs (miRNAs, small non-protein coding RNAs) have emerged as important posttranscriptional regulators of gene expression in animals. Given the increasingly recognized importance of miRNAs as an additional layer in the regulation of gene expression and hence biological function, recent efforts using RNA- and genome sequencing approaches have resulted in the creation of several resources for the construction of a comprehensive repertoire of rainbow trout miRNAs and isomiRs (variant miRNA sequences that all appear to derive from the same gene but vary in sequence due to post-transcriptional processing). Importantly, through the recent publication of the rainbow trout genome (Berthelot et al., 2014), mRNA 3'UTR information has become available, allowing for the first time the genome-wide prediction of miRNA-target RNA relationships in this species. We here report the creation of the microtrout database, a comprehensive resource for rainbow trout miRNA and annotated 3'UTRs. The comprehensive database was used to implement an algorithm to predict genome-wide rainbow trout-specific miRNA-mRNA target relationships, generating an improved predictive framework over previously published approaches. This work will serve as a useful framework and sequence resource to experimentally address the role of miRNAs in several research areas using the rainbow trout model, examples of which are discussed. Copyright © 2016 Elsevier Inc. All rights reserved.

Rainbow net analysis of VAXcluster system availability

NASA Technical Reports Server (NTRS)

Johnson, Allen M., Jr.; Schoenfelder, Michael A.

1991-01-01

A system modeling technique, Rainbow Nets, is used to evaluate the availability and mean-time-to-interrupt of the VAXcluster. These results are compared to the exact analytic results showing that reasonable accuracy is achieved through simulation. The complexity of the Rainbow Net does not increase as the number of processors increases, but remains constant, unlike a Markov model which expands exponentially. The constancy is achieved by using tokens with identity attributes (items) that can have additional attributes associated with them (features) which can exist in multiple states. The time to perform the simulation increases, but this is a polynomial increase rather than exponential. There is no restriction on distributions used for transition firing times, allowing real situations to be modeled more accurately by choosing the distribution which best fits the system performance and eliminating the need for simplifying assumptions.

Effect of stocking sub-yearling Atlantic salmon on the habitat use of sub-yearling rainbow trout

USGS Publications Warehouse

Johnson, James H.

2016-01-01

Atlantic salmon (Salmo salar) restoration in the Lake Ontario watershed may depend on the species' ability to compete with naturalized non-native salmonids, including rainbow trout (Oncorhynchus mykiss) in Lake Ontario tributaries. This study examined interspecific habitat associations between sub-yearling Atlantic salmon and rainbow trout as well as the effect of salmon stocking on trout habitat in two streams in the Lake Ontario watershed. In sympatry, Atlantic salmon occupied significantly faster velocities and deeper areas than rainbow trout. However, when examining the habitat use of rainbow trout at all allopatric and sympatric sites in both streams, trout habitat use was more diverse at the sympatric sites with an orientation for increased cover and larger substrate. In Grout Brook, where available habitat remained constant, there was evidence suggesting that trout may have shifted to slower and shallower water in the presence of salmon. The ability of sub-yearling Atlantic salmon to affect a habitat shift in rainbow trout may be due to their larger body size and/or larger pectoral fin size. Future studies examining competitive interactions between these species during their first year of stream residence should consider the size advantage that earlier emerging Atlantic salmon will have over rainbow trout.

Study of interfaces in an Axisymmetric Supersonic Jet using Background Oriented Schlieren (BOS)

NASA Astrophysics Data System (ADS)

Echeverría, Carlos; Porta, David; Aguayo, Alejandro; Cardoso, Hiroki; Stern, Catalina

2014-11-01

We have used several techniques to study a small axisymmetric supersonic jet: Rayleigh scattering, Schlieren Toepler and PIV. Each technique gives different kind of information. In this paper, a BOS set-up is used to study the structure of the shock pattern. A shadowgraph of a dot matrix is obtained with and without a flow. The displacement field of the dots is related to changes in the index of refraction, which can be related, through the Gladstone-Dale equation, to changes in density. Previous results with this technique were not conclusive because of the relative size of the dots compared to the diameter of the nozzle. Measurements have been taken for three different exit speeds. We acknowledge support from UNAM through DGAPA PAPIIT IN117712 and the Graduate Program in Mechanical Engineering.

Estrogen receptor mRNA in mineralized tissues of rainbow trout: calcium mobilization by estrogen.

PubMed

Armour, K J; Lehane, D B; Pakdel, F; Valotaire, Y; Graham, R; Russell, R G; Henderson, I W

1997-07-07

RT-PCR was undertaken on total RNA extracts from bone and scales of the rainbow trout, Oncorhynchus mykiss. The rainbow trout estrogen receptor (ER)-specific primers used amplified a single product of expected size from each tissue which, using Southern blotting, strongly hybridized with a 32P-labelled rtER probe under stringent conditions. These data provide the first in vivo evidence of ER mRNA in bone and scale tissues of rainbow trout and suggest that the effects of estrogen observed in this study (increased bone mineral and decreased scale mineral contents, respectively) may be mediated directly through ER.

Case Report: Strawberry Disease in Farmed Chilean Rainbow Trout.

PubMed

Sandoval, Carlos; Infante, Jorge; Abad, Jessica; Ferguson, Hugh W; Paredes, Enrique; Valdebenito, Samuel; Yáñez, Alejandro J; Ilardi, Pedro; Avendaño-Herrera, Ruben

2016-03-01

Strawberry disease is a chronic, nonlethal skin condition that affects Rainbow Trout Oncorhynchus mykiss in the United States and several European countries, where it is also known as red-mark syndrome. We provide the first identification and characterization of three strawberry disease outbreaks occurring at two aquaculture farms in southern Chile. Clinically affected fish weighing an average of 400 g presented multiple bright-red, usually raised, skin lesions on the flank, ventral surface, and dorsal surface. A PCR using Rickettsia-like-organism (RLO)-specific primers was performed on nine affected fish, and all skin samples were positive for the RLO 16S ribosomal RNA sequence. All PCR results for Flavobacterium psychrophilum and other bacterial and viral pathogens were negative. Histopathological examination of the skin lesions revealed extensive dermatitis, with severe lymphocytic infiltration in advanced cases. This report is the first to describe strawberry disease in farmed Chilean Rainbow Trout. Additional studies are needed to evaluate the risk for Rainbow Trout culture; fish challenge experiments should be performed to fulfill Koch's postulates and to demonstrate that RLO is the cause of this disease. Received December 27, 2014; accepted October 23, 2015.

Chasing nuclear rainbows

NASA Astrophysics Data System (ADS)

Allison, Wade

2010-01-01

Expeditions in search of a rainbow's end never reach their goal. Efforts to solve the problem of nuclear-waste disposal have not had much success either - perhaps because they have been addressing questions the wrong way round. There are two basic challenges of waste disposal. The first is scientific: the waste must be kept somewhere out of harm's way, where it does not incur major risks to current or future residents of the planet. The second is political: scientists must persuade and reassure the community as a whole that the waste is being handled, stored and disposed of safely.

Fabrication of digital rainbow holograms and 3-D imaging using SEM based e-beam lithography.

PubMed

Firsov, An; Firsov, A; Loechel, B; Erko, A; Svintsov, A; Zaitsev, S

2014-11-17

Here we present an approach for creating full-color digital rainbow holograms based on mixing three basic colors. Much like in a color TV with three luminescent points per single screen pixel, each color pixel of initial image is presented by three (R, G, B) distinct diffractive gratings in a hologram structure. Change of either duty cycle or area of the gratings are used to provide proper R, G, B intensities. Special algorithms allow one to design rather complicated 3D images (that might even be replacing each other with hologram rotation). The software developed ("RainBow") provides stability of colorization of rotated image by means of equalizing of angular blur from gratings responsible for R, G, B basic colors. The approach based on R, G, B color synthesis allows one to fabricate gray-tone rainbow hologram containing white color what is hardly possible in traditional dot-matrix technology. Budgetary electron beam lithography based on SEM column was used to fabricate practical examples of digital rainbow hologram. The results of fabrication of large rainbow holograms from design to imprinting are presented. Advantages of the EBL in comparison to traditional optical (dot-matrix) technology is considered.

Erosion of interspecific reproductive barriers resulting from hatchery supplementation of rainbow trout sympatric with cutthroat trout.

PubMed

Docker, Margaret F; Dale, Angie; Heath, Daniel D

2003-12-01

The frequency of hybridization between cutthroat (Onchorhynchus clarki clarki) and rainbow (O. mykiss irideus) trout from coastal habitats in British Columbia, Canada, was examined in seven populations where the two species are sympatric with no history of rainbow trout stocking and compared with areas where native rainbow trout populations have been supplemented with hatchery fish (three populations). Four nuclear markers were used to identify each species and interspecific hybrids and one mitochondrial marker showed the direction of gene exchange between species. The frequency of hybrids was significantly higher (Fisher exact test, P < 0.001) in river systems where hatchery rainbow trout have been introduced (50.6% hybrids) than in populations where the two species naturally co-occur without supplementation (9.9% hybrids).

MODELING THE ENDOCRINE CONTROL OF VITELLOGENIN PRODUCTION IN FEMALE RAINBOW TROUT

PubMed Central

Sundling, Kaitlin; Craciun, Gheorghe; Schultz, Irvin; Hook, Sharon; Nagler, James; Cavileer, Tim; Verducci, Joseph; Liu, Yushi; Kim, Jonghan; Hayton, William

2015-01-01

The rainbow trout endocrine system is sensitive to changes in annual day length, which is likely the principal environmental cue controlling its reproductive cycle. This study focuses on the endocrine regulation of vitellogenin (Vg) protein synthesis, which is the major egg yolk precursor in this fish species. We present a model of Vg production in female rainbow trout which incorporates a biological pathway beginning with sex steroid estradiol-17β levels in the plasma and concluding with Vg secretion by the liver and sequestration in the oocytes. Numerical simulation results based on this model are compared with experimental data for estrogen receptor mRNA, Vg mRNA, and Vg in the plasma from female rainbow trout over a normal annual reproductive cycle. We also analyze the response of the model to parameter changes. The model is subsequently tested against experimental data from female trout under a compressed photoperiod regime. Comparison of numerical and experimental results suggests the possibility of a time-dependent change in oocyte Vg uptake rate. This model is part of a larger effort that is developing a mathematical description of the endocrine control of reproduction in female rainbow trout. We anticipate that these mathematical and computational models will play an important role in future regulatory toxicity assessments and in the prediction of ecological risk. PMID:24506554

Hybridization dynamics between Colorado's native cutthroat trout and introduced rainbow trout.

PubMed

Metcalf, Jessica L; Siegle, Matthew R; Martin, Andrew P

2008-01-01

Newly formed hybrid populations provide an opportunity to examine the initial consequences of secondary contact between species and identify genetic patterns that may be important early in the evolution of hybrid inviability. Widespread introductions of rainbow trout (Oncorhynchus mykiss) into watersheds with native cutthroat trout (Oncorhynchus clarkii) have resulted in hybridization. These introductions have contributed to the decline of native cutthroat trout populations. Here, we examine the pattern of hybridization between introduced rainbow trout and 2 populations of cutthroat trout native to Colorado. For this study, we utilized 7 diagnostic, codominant nuclear markers and a diagnostic mitochondrial marker to investigate hybridization in a population of greenback cutthroat trout (Oncorhynchus clarkii stomias) and a population of Colorado River cutthroat trout (Oncorhynchus clarkii pleuriticus). We infer that cutthroat-rainbow trout hybrid swarms have formed in both populations. Although a mixture of hybrid genotypes was present, not all genotype combinations were detected at expected frequencies. We found evidence that mitochondrial DNA introgression in hybrids is asymmetric and more likely from rainbow trout than from cutthroat trout. A difference in spawning time of the 2 species or differences in the fitness between the reciprocal crosses may explain the asymmetry. Additionally, the presence of intraspecific cytonuclear associations found in both populations is concordant with current hypotheses regarding coevolution of mitochondrial and nuclear genomes.

Status of rainbow smelt in the U.S. waters of Lake Ontario, 2013

USGS Publications Warehouse

Weidel, Brian C.; Connerton, Michael J.

2014-01-01

Rainbow Smelt Osmerus mordax are the second most abundant pelagic prey fish in Lake Ontario after Alewife Alosa psuedoharengus. The 2013, USGS/NYSDEC bottom trawl assessment indicated the abundance of Lake Ontario age-1 and older Rainbow Smelt decreased by 69% relative to 2012. Length frequency-based age analysis indicated that age-1 Rainbow Smelt constituted approximately 50% of the population, which is similar to recent trends where the proportion of age-1 has ranged from 95% to 42% of the population. While they constituted approximately half of the catch, the overall abundance index for age 1 was one of the lowest observed in the time series, potentially a result of cannibalism from the previous year class. Combined data from all bottom trawl assessments along the southern shore and eastern basin indicate the proportion of the fish community that is Rainbow Smelt has declined over the past 30 years. In 2013 the proportion of the pelagic fish catch (only pelagic species) that was Rainbow Smelt was the second lowest in the time series at 3.1%. Community diversity indices, based on bottom trawl catches, indicate that Lake Ontario fish community diversity, as assessed by bottom trawls, has sharply declined over the past 36 years and in 2013 the index was the lowest value in the time series. Much of this community diversity decline is driven by changes in the pelagic fish community and dominance of Alewife.

Interactions between hatch dates, growth rates, and mortality of Age-0 native Rainbow Smelt and nonnative Alewife in Lake Champlain

USGS Publications Warehouse

Parrish, Donna; Simonin, Paul W.; Rudstam, Lars G.; Pientka, Bernard; Sullivan, Patrick J.

2016-01-01

Timing of hatch in fish populations can be critical for first-year survival and, therefore, year-class strength and subsequent species interactions. We compared hatch timing, growth rates, and subsequent mortality of age-0 Rainbow Smelt Osmerus mordax and Alewife Alosa pseudoharengus, two common open-water fish species of northern North America. In our study site, Lake Champlain, Rainbow Smelt hatched (beginning May 26) almost a month earlier than Alewives (June 20). Abundance in the sampling area was highest in July for age-0 Rainbow Smelt and August for age-0 Alewives. Late-hatching individuals of both species grew faster than those hatching earlier (0.6 mm/d versus 0.4 for Rainbow Smelt; 0.7 mm/d versus 0.6 for Alewives). Mean mortality rate during the first 45 d of life was 3.4%/d for age-0 Rainbow Smelt and was 5.5%/d for age-0 Alewives. Alewife mortality rates did not differ with hatch timing but daily mortality rates of Rainbow Smelt were highest for early-hatching fish. Cannibalism is probably the primary mortality source for age-0 Rainbow Smelt in this lake. Therefore, hatching earlier may not be advantageous because the overlap of adult and age-0 Rainbow Smelt is highest earlier in the season. However, Alewives, first documented in Lake Champlain in 2003, may increase the mortality of age-0 Rainbow Smelt in the summer, which should favor selection for earlier hatching.

Schlieren flow visualization of helium atmospheric plasma jet and influence of the gas flow rate and applied voltage frequency

NASA Astrophysics Data System (ADS)

Borghei, S. M.; Vaziri, N.; Alibabaei, S.

2018-03-01

We used schlieren photography to visualize the influence of gas flow rates of 1, 2.5, 5, 10 L/min and of the applied voltage frequency on a helium atmospheric plasma jet induced at the nozzle of a capillary tube. The expansion of the gas in the surrounding medium (air) was analyzed in the two different modes – plasma on/plasma off. Changes in the above parameters affect the gas flow regime and the hydrodynamics of the jet.

Field evaluation of rainbow trout selectively bred for resistance to bacterial cold water disease

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD) is a frequent cause of elevated mortality in rainbow trout and the development of effective control strategies is a priority within the U.S. Since 2005, the NCCCWA has implemented a selective breeding program and has created three genetic lines of outbred rainbow...

Liquid chromatographic determination of benzocaine and N-acetylbenzocaine in the edible fillet tissue from rainbow trout

USGS Publications Warehouse

Meinertz, J.R.; Stehly, G.R.; Hubert, T.D.; Bernardy, J.A.

1999-01-01

A method was developed for determining benzocaine and N-acetylbenzocaine concentrations in fillet tissue of rainbow trout. The method involves extracting the analytes with acetonitrile, removing lipids or hydrophobic compounds from the extract with hexane, and providing additional clean-up with solid-phase extraction techniques. Analyte concentrations are determined using reversed-phase high-performance liquid chromatographic techniques with an isocratic mobile phase and UV detection. The accuracy (range, 92 to 121%), precision (R.S.D., <14%), and sensitivity (method quantitation limit, <24 ng/g) for each analyte indicate the usefulness of this method for studies characterizing the depletion of benzocaine residues from fish exposed to benzocaine. Copyright (C) 1999.

Advanced Rainbow Solar Photovoltaic Arrays

NASA Technical Reports Server (NTRS)

Mardesich, Nick; Shields, Virgil

2003-01-01

Photovoltaic arrays of the rainbow type, equipped with light-concentrator and spectral-beam-splitter optics, have been investigated in a continuing effort to develop lightweight, high-efficiency solar electric power sources. This investigation has contributed to a revival of the concept of the rainbow photovoltaic array, which originated in the 1950s but proved unrealistic at that time because the selection of solar photovoltaic cells was too limited. Advances in the art of photovoltaic cells since that time have rendered the concept more realistic, thereby prompting the present development effort. A rainbow photovoltaic array comprises side-by-side strings of series-connected photovoltaic cells. The cells in each string have the same bandgap, which differs from the bandgaps of the other strings. Hence, each string operates most efficiently in a unique wavelength band determined by its bandgap. To obtain maximum energy-conversion efficiency and to minimize the size and weight of the array for a given sunlight input aperture, the sunlight incident on the aperture is concentrated, then spectrally dispersed onto the photovoltaic array plane, whereon each string of cells is positioned to intercept the light in its wavelength band of most efficient operation. The number of cells in each string is chosen so that the output potentials of all the strings are the same; this makes it possible to connect the strings together in parallel to maximize the output current of the array. According to the original rainbow photovoltaic concept, the concentrated sunlight was to be split into multiple beams by use of an array of dichroic filters designed so that each beam would contain light in one of the desired wavelength bands. The concept has since been modified to provide for dispersion of the spectrum by use of adjacent prisms. A proposal for an advanced version calls for a unitary concentrator/ spectral-beam-splitter optic in the form of a parabolic curved Fresnel-like prism

Residues of benzocaine in rainbow trout, largemouth bass, and fish meal

USGS Publications Warehouse

Allen, J.L.

1988-01-01

Residues of the anesthetic benzocaine in muscle tissue of rainbow trout (Salmo gairdneri ) and largemouth bass (Micropterus salmoides ) were determined after exposure of the fish to 50 mg benzocaine/L for 15 min and withdrawal times of 0-24 h. The mean concentration of benzocaine residues in fish sampled immediately after exposure was 14.0 mu g/g in rainbow trout and 10.6 mu g/g in largemouth bass. Residues were below the control value after 8 h of withdrawal in largemouth bass and near the control value after 4 h of withdrawal in rainbow trout. Although residues of benzocaine were high in fish immediately after exposure, the concentration declined rapidly when the fish were held in flowing fresh water. Fish meal prepared from Pacific salmon (Oncorhynchus sp.) that had been anesthetized with benzocaine or tricaine (MS-222) contained residues of 45.1 mu g benzocaine/g or 47.7 mu g tricaine/g.

Ultraviolet-B radiation and the immune response of rainbow trout: Chapter 18

USGS Publications Warehouse

Fabacher, David L.; Little, Edward E.; Jones, S.B.; DeFabo, E.C.; Webber, L.J.; Stolen, Joanne S.; Fletcher, Thelma C.

1994-01-01

As part of a larger study on global climate change and ozone depletion we are investigating the effects of ultraviolet-B (UVB) radiation on fishes. We conducted a number of experiments to explore the possible effects of UVB radiation on the immune response of juvenile rainbow trout Oncorhynchus mykiss. In one study, the fish developed sunburn and fungal infection on the dorsal skin after exposure to levels of UVB that simulated ambient solar UVB levels observed at mid-latitudes. In a separate study, UVB-exposed rainbow trout with surgically administered dorsal lesions developed fungal infection on the lesions and surrounding skin. Many of these fish subsequently died within a 9 day exposure period. Fish with surgical lesions, but not exposed to UVB radiation, did not develop fungal infection and did not die. In mammals, UVB-induced immunosuppression is thought to occur through the isomerization of urocanic acid or the formation of DNA pyrimidine dimers, or through some interaction between the two. We found a substance that appeared, upon HPLC detection, to be trans-urocanic acid in the skin of UVB-exposed and unexposed rainbow trout. Neurotransmitter stimulation of adrenoceptors may be involved in changes in pigmentation observed in UVB-exposed fishes. We measured adrenoceptors in skin membranes from rainbow trout exposed to UVB and found a decrease in cz2-adrenoceptors compared with fish not exposed to UVB. Results of our study indicate that prolonged exposure of juvenile rainbow trout to mid-latitude levels of solar UVB may play an important role in the initiation of certain disease outbreaks and may decrease survival of fish that have lesions on the dorsal skin.

Review of potential interactions between stocked rainbow trout and listed Snake River sockeye salmon in Pettit Lake Idaho

DOE Office of Scientific and Technical Information (OSTI.GOV)

Teuscher, D.

1996-05-01

The objective of this study was to determine if hatchery rainbow trout compete with or prey on juvenile Snake River sockeye salmon Oncorhynchus nerka in Pettit Lake, Idaho. In 1995, a total of 8,570 age-0 sockeye and 4,000 hatchery rainbow trout were released in Pettit Lake. After releasing the fish, gillnets were set in the pelagic and littoral zones to collected diet and spatial distribution data. Interactions were assessed monthly from June 1995 through March 1996. Competition for food was discounted based on extremely low diet overlap results observed throughout the sample period. Conversely, predation interactions were more significant. Amore » total of 119 rainbow trout stomachs were analyzed, two contained O. nerka. The predation was limited to one sample period, but when extrapolated to the whole rainbow trout populations results in significant losses. Total consumption of O. nerka by rainbow trout ranged from an estimated 10 to 23% of initial stocking numbers. Predation results contradict earlier findings that stocked rainbow trout do not prey on wild kokanee or sockeye in the Sawtooth Lakes. The contradiction may be explained by a combination of poorly adapted hatchery sockeye and a littoral release site that forced spatial overlap that was not occurring in the wild populations. Releasing sockeye in the pelagic zone may have reduced or eliminated predation losses to rainbow trout.« less

Fish assemblage structure in an Oklahoma Ozark stream before and after rainbow trout introduction

USGS Publications Warehouse

Walsh, M.G.; Winkelman, D.L.

2005-01-01

Rainbow trout Oncorhynchus mykiss have been widely stocked throughout the United States as a popular sport fish. Our study was initiated to evaluate potential effects of rainbow trout introduction on native fishes to inform future decisions about trout stocking in northeastern Oklahoma streams. We sampled fish assemblages in pools, glides, and riffles in Brush Creek, Delaware County, Oklahoma, from February 2000 to September 2002, and experimentally stocked rainbow trout into the stream from November 2000 to March 2001 and November 2001 to March 2002. We used a combination of multivariate analyses to evaluate seasonal and habitat effects on native fish assemblages and to compare assemblage structure between prestocking, the first year of stocking, and the second year of stocking. Mesohabitat type significantly affected assemblage structure among years, whereas we did not detect an effect of season. We did not detect differences in assemblage structure among years in glide or riffle habitats. Native fish assemblage structure in pool habitats before rainbow trout introduction differed from assemblage structure in both the first and second year of stocking. Declines in seven species, including two native game fish (smallmouth bass Micropterus dolomieu and bluegill Lepomis machrochirus), contributed to assemblage dissimilarity in pool habitats between prestocking conditions and the second year of stocking. Our results indicate that stocking rainbow trout may cause local disruption in assemblage structure in pool habitats. ?? 2004 by the American Fisheries Society.

SNP identification, genetic mapping and tissue expression of the rainbow trout TLR9 gene

USDA-ARS?s Scientific Manuscript database

Single nucleotide polymorphisms (SNPs) in Toll-like receptor (TLR) genes have been reported to be associated with disease resistance in human and livestock. A number of TLR genes have been identified in rainbow trout including TLR2, TLR3, TLR5, TLR20, TLR22 and TLR23. The rainbow trout (Oncorhynch...

Interferograms, schlieren, and shadowgraphs constructed from real- and ideal-gas, two- and three-dimensional computed flowfields

NASA Technical Reports Server (NTRS)

Yates, Leslie A.

1993-01-01

The construction of interferograms, schlieren, and shadowgraphs from computed flowfield solutions permits one-to-one comparisons of computed and experimental results. A method of constructing these images from both ideal- and real-gas, two and three-dimensional computed flowfields is described. The computational grids can be structured or unstructured, and multiple grids are an option. Constructed images are shown for several types of computed flows including nozzle, wake, and reacting flows; comparisons to experimental images are also shown. In addition, th sensitivity of these images to errors in the flowfield solution is demonstrated, and the constructed images can be used to identify problem areas in the computations.

Interferograms, Schlieren, and Shadowgraphs Constructed from Real- and Ideal-Gas, Two- and Three-Dimensional Computed Flowfields

NASA Technical Reports Server (NTRS)

Yates, Leslie A.

1992-01-01

The construction of interferograms, schlieren, and shadowgraphs from computed flowfield solutions permits one-to-one comparisons of computed and experimental results. A method for constructing these images from both ideal- and real-gas, two- and three-dimensional computed flowfields is described. The computational grids can be structured or unstructured, and multiple grids are an option. Constructed images are shown for several types of computed flows including nozzle, wake, and reacting flows; comparisons to experimental images are also shown. In addition, the sensitivity of these images to errors in the flowfield solution is demonstrated, and the constructed images can be used to identify problem areas in the computations.

Schlieren imaging of the standing wave field in an ultrasonic acoustic levitator

NASA Astrophysics Data System (ADS)

Rendon, Pablo Luis; Boullosa, Ricardo R.; Echeverria, Carlos; Porta, David

2015-11-01

We consider a model of a single axis acoustic levitator consisting of two cylinders immersed in air and directed along the same axis. The first cylinder has a flat termination and functions as a sound emitter, and the second cylinder, which is simply a refector, has the side facing the first cylinder cut out by a spherical surface. By making the first cylinder vibrate at ultrasonic frequencies a standing wave is produced in the air between the cylinders which makes it possible, by means of the acoustic radiation pressure, to levitate one or several small objects of different shapes, such as spheres or disks. We use schlieren imaging to observe the acoustic field resulting from the levitation of one or several objects, and compare these results to previous numerical approximations of the field obtained using a finite element method. The authors acknowledge financial support from DGAPA-UNAM through project PAPIIT IN109214.

Evaluation of the utility of the new rainbow trout genome assembly for analyzing RNA-seq data from stress response experiments

USDA-ARS?s Scientific Manuscript database

The newly released rainbow trout genome assembly in NCBI RefSeq has greatly expanded our abilities for analyzing rainbow trout sequencing data. In this poster, we evaluate the utility of this genome assembly for analyzing RNA sequencing (RNA-seq) data of rainbow trout responses to various stressors,...

Transcriptome analysis of rainbow trout infected with high and low virulence strains of Infectious hematopoietic necrosis virus

USGS Publications Warehouse

Purcell, Maureen K.; Marjara, Inderjit Singh; Batts, William; Kurath, Gael; Hansen, John D.

2010-01-01

There are three main genetic lineages or genogroups of Infectious hematopoietic necrosis virus (IHNV) in N. America. Strains representing the M genogroup are more virulent in rainbow trout relative to the U genogroup. In this study, we used microarray analysis to evaluate potential mechanisms responsible for host-specific virulence in rainbow trout that were given intraperitoneal injections of buffer or a representative M or U type virus strain. Reverse transcriptase quantitative PCR (RT-qPCR) was used to assess viral load and gene expression of select immune genes. Viral load was significantly higher in trout infected with the M virus starting at 24 h post-infection (p.i.) and continuing until 72 h p.i. Microarray analysis of the 48 h time point revealed 153 up-regulated and 248 down-regulated features in response to M virus infection but only 62 up-regulated and 49 down-regulated features following U virus infection. Translation and transcription features were among the most frequent down-regulated features in response to M virus infection and may be associated with the host cell shutoff phenomenon. A greater host cell shutoff response by the M virus may facilitate subversion of the host cell transcriptional machinery and enhance viral replication, suggesting the M virus may be better optimized to manipulate the rainbow trout transcriptional and translational machinery. Anti-viral associated features were the most commonly up-regulated features. A common set of features were up-regulated in both the M and U infection groups, but were induced to a higher magnitude in the M infection group. Gene expression of the anti-viral genes Mx-1 and Vig-1 was correlated but not entirely dependent on viral load in the anterior kidney. Slower replication of the U virus may allow the host more time to induce protective anti-viral immune mechanisms.

Comparison of chromogenic Biolog Rainbow agar Shigella/Aeromonas with xylose lysine desoxycholate agar for isolation and detection of Shigella spp. from foods.

PubMed

Zhang, Guodong; Lampel, Keith A

2010-08-01

Shigella outbreaks are widely reported throughout the world. However, it remains a challenge to isolate Shigella spp. from foods by using conventional microbiological media. The main objective of this study was to determine the effectiveness of a novel chromogenic medium, Rainbow agar Shigella/Aeromonas (Rainbow agar), for the isolation and detection of Shigella spp. in foods. All four Shigella species, S. sonnei, S. flexneri, S. dysenteriae, and S. boydii, were studied. Rainbow agar was compared with tryptic soy agar, xylose lysine desoxycholate agar (XLD), and Salmonella Shigella agar (SSA) for enumeration of Shigella spp. in pure culture. This chromogenic agar and XLD were also used to isolate Shigella spp. in artificially contaminated foods (4.8 log CFU/g of food), including lettuce, parsley, cilantro, spinach, potato salad, and shrimp. The inhibitory effect on Shigella growth by Rainbow agar was between that of XLD and SSA. All vegetables studied showed a moderately high background microflora on XLD and Rainbow agar. With artificially inoculated produce, Rainbow agar recovered about 1 to 2 log CFU more S. sonnei, S. dysenteriae, and S. boydii per g of food than did XLD. For potato salad and shrimp, which had low background microflora on Rainbow agar, Rainbow agar was slightly better in recovering Shigella spp. than XLD was in most cases. However, we found that the addition of streptomycin (6.25 mg/liter) to Rainbow agar could facilitate the isolation of Shigella in vegetables tested. In conclusion, Rainbow agar was a much more effective medium than was XLD for the isolation of Shigella spp. from foods.

Habitat shifts in rainbow trout: competitive influences of brown trout.

PubMed

Gatz, A J; Sale, M J; Loar, J M

1987-11-01

We compared habitat use by rainbow trout sympatric (three streams) and allopatric (two streams) with brown trout to determine whether competition occurred between these two species in the southern Appalachian Mountains. We measured water depth, water velocity, substrate, distance to overhead vegetation, sunlight, and surface turbulence both where we collected trout and for the streams in general. This enabled us to separate the effects of habitat availability from possible competitive effects. The results provided strong evidence for asymmetrical interspecific competition. Habitat use varied significantly between allopatric and sympatric rainbow trout in 68% of the comparisons made. Portions of some differences refelected differences in habitats available in the several streams. However, for all habitat variables measured except sunlight, rainbow trout used their preferred habitats less in sympatry with brown trout than in allopatry if brown trout also preferred the same habitats. Multivariate analysis indicated that water velocity and its correlates (substrate particle size and surface turbulence) were the most critical habitat variables in the interaction between the species, cover in the form of shade and close overhead vegetation was second most important, and water depth was least important.

Innocent until proven guilty? Stable coexistence of alien rainbow trout and native marble trout in a Slovenian stream

NASA Astrophysics Data System (ADS)

Vincenzi, Simone; Crivelli, Alain J.; Jesensek, Dusan; Rossi, Gianluigi; de Leo, Giulio A.

2011-01-01

To understand the consequences of the invasion of the nonnative rainbow trout Oncorhynchus mykiss on the native marble trout Salmo marmoratus, we compared two distinct headwater sectors where marble trout occur in allopatry (MTa) or sympatry (MTs) with rainbow trout (RTs) in the Idrijca River (Slovenia). Using data from field surveys from 2002 to 2009, with biannual (June and September) sampling and tagging from June 2004 onwards, we analyzed body growth and survival probabilities of marble trout in each stream sector. Density of age-0 in September over the study period was greater for MTs than MTa and very similar between MTs and RTs, while density of trout ≥age-1 was similar for MTa and MTs and greater than density of RTs. Monthly apparent survival probabilities were slightly higher in MTa than in MTs, while RTs showed a lower survival than MTs. Mean weight of marble and rainbow trout aged 0+ in September was negatively related to cohort density for both marble and rainbow trout, but the relationship was not significantly different between MTs and MTa. No clear depression of body growth of sympatric marble trout between sampling intervals was observed. Despite a later emergence, mean weight of RTs cohorts at age 0+ in September was significantly higher than weight of both MTs and MTa. The establishment of a self-sustaining population of rainbow trout does not have a significant impact on body growth and survival probabilities of sympatric marble trout. The numerical dominance of rainbow trout in streams at lower altitudes seem to suggest that while the low summer flow pattern of Slovenian streams is favorable for rainbow trout invasion, the adaptation of marble trout to headwater environments may limit the invasion success of rainbow trout in headwaters.

Healing Rate of Swim Bladders in Rainbow Trout

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bellgraph, Brian J.; Brown, Richard S.; Stephenson, John R.

2008-12-01

The swimbladders of juvenile rainbow trout Onchorhynchus mykiss were ruptured and subsequently observed for 28 days to identify healing patterns of swimbladder wounds and the effects of swimbladder rupture on direct mortality. Healing began within seven days, wounds were completely closed after 14 days, and no mortalities occurred. The healing process followed a pattern in which tissue first thickened around the opening (7 to 14 days), followed by scarring of the ruptured area, and disappearance of any evidence of the wound (21 to 28 days). The healing observed in juvenile rainbow trout swimbladders suggests that swimbladder rupture does not resultmore » in direct mortality as was hypothesized; however, the indirect effects of swimbladder injury (e.g., a decreased ability to swim efficiently) may lead to mortality by predation or other natural phenomena that were not observable in this study.« less

Robotics and medicine: A scientific rainbow in hospital.

PubMed

Jeelani, S; Dany, A; Anand, B; Vandana, S; Maheswaran, T; Rajkumar, E

2015-08-01

The journey of robotics is a real wonder and astonishingly can be considered as a scientific rainbow showering surprising priceless power in the era of future technologies. The astonishing seven technologies discussed in this paper are da Vinci Robotic surgical system and sperm sorters for infertility, Veebot for blood investigation, Hanako the robotic dental patient for simulating the dental patient and helping a trainee dentist, RP-7 robot who is around-the-clock physician connecting the physician and patient, Robot for Interactive Body Assistance (RIBA) who is a RIBA serving as a nurse, Bushbot serving as a brilliant surgeon, and Virtibot helping in virtual autopsy. Thus, robotics in medicine is a budding field contributing a great lot to human life from before birth to afterlife in seven forms thus gracefully portraying a scientific rainbow in hospital environment.

Compositional Effects on Electromechanical Degradation of RAINBOW Actuators

NASA Technical Reports Server (NTRS)

Dausch, David E.; Wise, Stephanie A.

1998-01-01

The effect of ceramic composition on the electromechanical displacement degradation of RAINBOW (Reduced and Internally Biased Oxide Wafer) actuators was investigated. RAINBOWs were fabricated from commercially available PZT-5H and PZT-5A piezoelectric disks as well as from tape cast PLZT piezoelectric 7/65/35 and electrostrictive 9/65/35 compositions. Displacement properties were measured at low electric fields (10 to 13 kV/cm) under loads of 0 to 500 g, and displacement degradation as a function of time was observed over 107 cycles. The PZT-5A and PLZT 9/65/35 compositions exhibited minimal decrease in displacement when load was applied. Furthermore, these compositions retained approximately 65 percent of their initial displacement after 10(exp 7) cycles under a load of 300 g. PZT-5H and PLZT 7/65/35 degraded completely under these conditions.

Robotics and medicine: A scientific rainbow in hospital

PubMed Central

Jeelani, S.; Dany, A.; Anand, B.; Vandana, S.; Maheswaran, T.; Rajkumar, E.

2015-01-01

The journey of robotics is a real wonder and astonishingly can be considered as a scientific rainbow showering surprising priceless power in the era of future technologies. The astonishing seven technologies discussed in this paper are da Vinci Robotic surgical system and sperm sorters for infertility, Veebot for blood investigation, Hanako the robotic dental patient for simulating the dental patient and helping a trainee dentist, RP-7 robot who is around-the-clock physician connecting the physician and patient, Robot for Interactive Body Assistance (RIBA) who is a RIBA serving as a nurse, Bushbot serving as a brilliant surgeon, and Virtibot helping in virtual autopsy. Thus, robotics in medicine is a budding field contributing a great lot to human life from before birth to afterlife in seven forms thus gracefully portraying a scientific rainbow in hospital environment. PMID:26538882

Chemical composition of rainbow trout urine following acute hypoxic stress

USGS Publications Warehouse

Hunn, Joseph B.

1969-01-01

Rainbow trout (Salmo gairdnerii) were anesthetized with MS-222, catheterized, and introduced into urine collecting chambers. Twenty-four hours after introduction, a 4-hour accumulation of urine was collected to serve as the control. Water flow to the chambers was then discontinued for 30 minutes during which the oxygen content of the water exiting in the chamber dropped from 4.9 to 2.8 mg/l. Following this hypoxic stress fresh water was restored and accumulated urine samples were taken for analysis at 1, 4, and 20 hours post-hypoxic stress. Rainbow trout excrete abnormally high concentrations of Na, K, Mg, Cl, and inorganic PO4 following hypoxia.

Primordial perturbations in a rainbow universe with running Newton constant

NASA Astrophysics Data System (ADS)

Brighenti, Francesco; Gubitosi, Giulia; Magueijo, Joao

2017-03-01

We compute the spectral index of primordial perturbations in a rainbow universe. We allow the Newton constant G to run at (super-) Planckian energies and we consider both vacuum and thermal perturbations. If the rainbow metric is the one associated to a generalized Horava-Lifshitz dispersion relation, we find that only when G tends asymptotically to 0 can one match the observed value of the spectral index and solve the horizon problem, both for vacuum and thermal perturbations. For vacuum fluctuations the observational constraints imply that the primordial universe expansion can be both accelerating or decelerating, while in the case of thermal perturbations only decelerating expansion is allowed.

Parthenogenesis in a Brazilian rainbow boa (Epicrates cenchria cenchria).

PubMed

Kinney, Matthew E; Wack, Raymund F; Grahn, Robert A; Lyons, Leslie

2013-03-01

A 22-year-old captive Brazilian rainbow boa (Epicrates cenchria cenchria) gave birth to four offspring after being housed with a vasectomized male. Sexual reproduction as a result of failed prior vasectomy, recanalization of the vas deferens, or prolonged sperm storage was ruled out using the clinical history, histopathology, and gross necropsy. Short tandem repeat (STR) DNA markers were genotyped in the male, female, and four offspring. None of the offspring possessed a diagnostic STR allele present in the potential sire. In addition, all offspring were homozygous at each STR locus evaluated, supporting parthenogenetic reproduction. This is the first report of parthenogenesis in a Brazilian rainbow boa and has implications for the conservation of reptiles maintained in captive breeding programs. © 2012 Wiley Periodicals, Inc.

Evaluation of angler effort and harvest of rainbow trout (Oncorhynchus mykiss), Lake Scanewa, Washington, 2010

USGS Publications Warehouse

Liedtke, Theresa L.; Kock, Tobias J.; Ekstrom, Brian K.; Tomka, Ryan G.; Rondorf, Dennis W.

2011-01-01

A creel evaluation was conducted in Lake Scanewa, a reservoir on the Cowlitz River, to monitor catch rates of rainbow trout (Oncorhynchus mykiss) and determine if the trout fishery was having negative impacts on juvenile anadromous salmon (Oncorhynchus spp.) in the system. The trout fishery, which is supported by releases of 20,000 fish (2 fish per pound) per year from June to August, was developed to mitigate for the construction of the Cowlitz Falls Dam in 1994. The trout fishery has a target catch rate of at least 0.50 fish per hour. Interviews with 1,214 anglers during the creel evaluation found that most anglers targeted rainbow trout (52 percent) or Chinook and coho salmon (48 percent). The interviewed anglers caught a total of 1,866 fish, most of which were rainbow trout (1,213 fish; 78 percent) or coho salmon (311 fish; 20 percent). We estimated that anglers spent 17,365 hours fishing in Lake Scanewa from June to November 2010. Catch rates for boat anglers (1.39 fish per hour) exceeded the 0.50 fish per hour target, whereas catch rates for shore anglers (0.35 fish per hour) fell short of the goal. The combined catch rates for all trout anglers in the reservoir were 0.96 fish per hour. We estimated that anglers harvested 7,584 (95 percent confidence interval = 2,795-12,372 fish) rainbow trout during the study period and boat anglers caught more fish than shore anglers (5,975 and 1,609 fish, respectively). This estimate suggests that more than 12,000 of the 20,000 rainbow trout released into Lake Scanewa during 2010 were not harvested, and could negatively impact juvenile salmon in the reservoir through predation or competition. We examined 1,236 stomach samples from rainbow trout and found that 2.1 percent (26 fish) of these samples contained juvenile fish. Large trout (greater than 300 millimeters) had a higher incidence of predation than small trout (less than 300 millimeters; 8.50 and 0.06 percent, respectively). A total of 39 fish were found in rainbow

Population control of exotic rainbow trout in streams of a natural area park

NASA Astrophysics Data System (ADS)

Moore, Stephen E.; Larson, Gary L.; Ridley, Bromfield

1986-03-01

Expansion of the distribution of exotic rainbow trout is thought to be a leading cause for the decline of native brook trout since the 1930s in Great Smoky Mountains National Park, USA. An experimental rehabilitation project was conducted from 1976 to 1981 using backpack electrofish shockers on four remnant brook trout populations sympatric with rainbow trout. The objectives were to evaluate the effectiveness of the technique to remove the exotic rainbow trout, to determine the population responses by native brook trout, and to evaluate the usefulness of the technique for trout management in the park. Rainbow trout populations were greatly reduced in density after up to six years of electrofishing, but were not eradicated. Rainbow trout recruitment, however, was essentially eliminated. Brook trout populations responded by increasing in density (including young-of-the-year), but rates of recovery differed among streams. The maximum observed densities ir each stream occurred at the end of the project. The findings suggest that electrofishing had a major negative impact on the exotic species, which was followed by positive responses from the native species in the second and third order study streams. The technique would probably be less effective in larger (fourth-order) park streams, but as an eradication tool the technique may have its highest potential in small first order streams. Nonetheless, the technique appears useful for population control without causing undue impacts on native aquatic species, although it is labor intensive, and capture efficiency is greatly influenced by fish size and stream morphology. To completely remove the exotic fish from selected streams, different technologies will have to be explored and developed.

Chasing the rainbow: lesbian, gay, bisexual, transgender and queer youth and pride semiotics.

PubMed

Wolowic, Jennifer M; Heston, Laura V; Saewyc, Elizabeth M; Porta, Carolyn; Eisenberg, Marla E

2017-05-01

While the pride rainbow has been part of political and social intervention for decades, few have researched how lesbian, gay, bisexual, transgender and queer young people perceive and use the symbol. How do lesbian, gay, bisexual, transgender and queer youth who experience greater feelings of isolation and discrimination than heterosexual youth recognise and deploy the symbol? As part of a larger study on supportive lesbian, gay, bisexual, transgender and queer youth environments, we conducted 66 go-along interviews with lesbian, gay, bisexual, transgender and queer youth people from Massachusetts, Minnesota and British Columbia. During interviews, young people identified visible symbols of support, including recognition and the use of the pride rainbow. A semiotic analysis reveals that young people use the rainbow to construct meanings related to affiliation and positive feelings about themselves, different communities and their futures. Constructed and shared meanings help make the symbol a useful tool for navigating social and physical surroundings. As part of this process, however, young people also recognize that there are limits to the symbolism; it is useful for navigation but its display does not always guarantee supportive places and people. Thus, the pride rainbow connotes safety and support, but using it as a tool for navigation is a learned activity that requires caution.

Chasing the rainbow: lesbian, gay, bisexual, transgender and queer youth and pride semiotics

PubMed Central

Wolowic, Jennifer M.; Heston, Laura V.; Saewyc, Elizabeth M.; Porta, Carolyn; Eisenberg, Marla E.

2017-01-01

While the pride rainbow has been part of political and social intervention for decades, few have researched how lesbian, gay, bisexual, transgender and queer young people perceive and use the symbol. How do lesbian, gay, bisexual, transgender and queer youth who experience greater feelings of isolation and discrimination than heterosexual youth recognise and deploy the symbol? As part of a larger study on supportive lesbian, gay, bisexual, transgender and queer youth environments, we conducted 66 go-along interviews with lesbian, gay, bisexual, transgender and queer youth people from Massachusetts, Minnesota and British Columbia. During interviews, young people identified visible symbols of support, including recognition and the use of the pride rainbow. A semiotic analysis reveals that young people use the rainbow to construct meanings related to affiliation and positive feelings about themselves, different communities and their futures. Constructed and shared meanings help make the symbol a useful tool for navigating social and physical surroundings. As part of this process, however, young people also recognize that there are limits to the symbolism; it is useful for navigation but its display does not always guarantee supportive places and people. Thus, the pride rainbow connotes safety and support, but using it as a tool for navigation is a learned activity that requires caution. PMID:27829321

Quantitative expression profiling of immune response genes in rainbow trout following infectious haematopoietic necrosis virus (IHNV) infection or DNA vaccination

USGS Publications Warehouse

Purcell, Maureen K.; Kurath, Gael; Garver, Kyle A.; Herwig, Russell P.; Winton, James R.

2004-01-01

Infectious haematopoietic necrosis virus (IHNV) is a well-studied virus of salmonid fishes. A highly efficacious DNA vaccine has been developed against this virus and studies have demonstrated that this vaccine induces both an early and transient non-specific anti-viral phase as well as long-term specific protection. The mechanisms of the early anti-viral phase are not known, but previous studies noted changes in Mx gene expression, suggesting a role for type I interferon. This study used quantitative real-time reverse transcriptase PCR methodology to compare expression changes over time of a number of cytokine or cytokine-related genes in the spleen of rainbow trout following injection with poly I:C, live IHNV, the IHNV DNA vaccine or a control plasmid encoding the non-antigenic luciferase gene. The target genes included Mx-1, viral haemorrhagic septicaemia virus induced gene 8 (Vig-8), TNF-α1, TNF-α2, IL-1β1, IL-8, TGF-β1 and Hsp70. Poly I:C stimulation induced several genes but the strongest and significant response was observed in the Mx-1 and Vig-8 genes. The live IHN virus induced a significant response in all genes examined except TGF-β1. The control plasmid construct and the IHNV DNA vaccine marginally induced a number of genes, but the main difference between these two groups was a statistically significant induction of the Mx-1 and Vig-8 genes by the IHNV vaccine only. The gene expression profiles elicited by the live virus and the IHNV DNA vaccine differed in a number of aspects but this study confirms the clear role for a type I interferon-like response in early anti-viral defence.

Assessment of genetic differentiation and genetic assignment of commercial rainbow trout strains using a SNP panel

USDA-ARS?s Scientific Manuscript database

Rainbow trout (Oncorhynchus mykiss) is the most widely cultured cold freshwater fish in the world, with production on every continent except Antarctica. Troutlodge, Inc., one of the largest commercial rainbow trout egg producers in the world, has developed four strains (February, May, August and Nov...

Optical elements formed by compressed gases: Analysis and potential applications

NASA Technical Reports Server (NTRS)

Howes, W. L.

1986-01-01

Spherical, cylindrical, and conical shock waves are optically analogous to gas lenses. The geometrical optics of these shock configurations are analyzed as they pertain to flow visualization instruments, particularly the rainbow schlieren apparatus and single-pass interferometers. It is proposed that a lens or mirror formed by gas compressed between plastic sheets has potential as a fluid visualization test object; as the objective mirror in a very large space-based telescope, communication antenna, or energy collector; as the objective mirror in inexpensive commercial telescopes; and as a component in fluid visualization apparatuses.

Optical caustics associated with the primary and the secondary rainbows of oblate droplets

NASA Astrophysics Data System (ADS)

Yu, Haitao; Shen, Jianqi; Tropea, Cameron

2014-08-01

The vector ray tracing (VRT) model is used to simulate the optical caustic structures near the primary and the secondary rainbow angles of oblate water droplets. The evolution process of the optical caustic structures in response to shape deformation of the water droplet is discussed. The dependence of the caustic structures on equatorial radius, refractive index and aspect ratio of the droplet are studied and the curvatures of the two rainbow fringes are calculated.

Effects of whirling disease on selected hematological parameters in rainbow trout

USGS Publications Warehouse

Densmore, Christine L.; Blazer, V.S.; Waldrop, T.B.; Pooler, P.S.

2001-01-01

Hematological responses to whirling disease in rainbow trout (Oncorhynchus mykiss) were investigated. Two-mo-old fingerling rainbow trout were exposed to cultured triactinomyxon spores of Myxobolus cerebralis at 9,000 spores/fish in December, 1997. Twenty-four wks post-exposure, fish were taken from infected and uninfected groups for peripheral blood and cranial tissue sampling. Histological observations on cranial tissues confirmed M. cerebralis infection in all exposed fish. Differences in hematological parameters between the two groups included significantly lower total leukocyte and small lymphocyte counts for the infected fish. No effects on hematocrit, plasma protein concentration, or other differential leukocyte counts were noted.

Rainbows of Intelligence. Exploring How Students Learn.

ERIC Educational Resources Information Center

Teele, Sue

This book offers practical applications for exploring multiple intelligences in the classroom to help each student express his or her own personal learning rainbow. Special features of the book include seven complete lesson plans ready to be adapted to any grade level; objectives, activities, and applications that meet U.S. and California…

Molecular analysis of population genetic structure and recolonization of rainbow trout following the Cantara spill

USGS Publications Warehouse

Nielsen, J.L.; Heine, Erika L.; Gan, Christina A.; Fountain, Monique C.

2000-01-01

Mitochondrial DNA (mtDNA) sequence and allelic frequency data for 12 microsatellite loci were used to analyze population genetic structure and recolonization by rainbow trout, Oncorhynchus mykiss, following the 1991 Cantara spill on the upper Sacramento River, California. Genetic analyses were performed on 1,016 wild rainbow trout collected between 1993 and 1996 from the mainstem and in 8 tributaries. Wild trout genotypes were compared to genotypes for 79 Mount Shasta Hatchery rainbow trout. No genetic heterogeneity was found 2 years after the spill (1993) between tributary populations and geographically proximate mainstem fish, suggesting recolonization of the upper mainstem directly from adjacent tributaries. Trout collections made in 1996 showed significant year-class genetic variation for mtDNA and microsatellites when compared to fish from the same locations in 1993. Five years after the spill, mainstem populations appeared genetically mixed with no significant allelic frequency differences between mainstem populations and geographically proximate tributary trout. In our 1996 samples, we found no significant genetic differences due to season of capture (summer or fall) or sampling technique used to capture rainbow trout, with the exception of trout collected by electrofishing and hook and line near Prospect Avenue. Haplotype and allelic frequencies in wild rainbow trout populations captured in the upper Sacramento River and its tributaries were found to differ genetically from Mount Shasta Hatchery trout for both years, with the notable exception of trout collected in the lower mainstem river near Shasta Lake, where mtDNA and microsatellite data both suggested upstream colonization by hatchery fish from the reservoir. These data suggest that the chemical spill in the upper Sacramento River produced significant effects over time on the genetic population structure of rainbow trout throughout the entire upper river basin.

Marker-assisted selection for resistance to bacterial cold water disease in a commercial rainbow trout breeding population

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD), caused by Flavobacterium psychrophilum, is an endemic and problematic disease in rainbow trout (Oncorhynchus mykiss) aquaculture. Previously, we have identified SNPs (single nucleotide polymorphisms) associated with BCWD resistance in rainbow trout. The objective...

Influence of variable rainbow smelt and gizzard shad abundance on walleye diets and growth

USGS Publications Warehouse

Fincel, Mark J.; Dembkowski, Daniel J.; Chipps, Steven R.

2014-01-01

Prey availability influences growth and condition of walleye (Sander vitreus) in large systems. In Lake Oahe, South Dakota, rainbow smelt (Osmerus mordax) and gizzard shad (Dorosoma cepedianum) are primary prey of walleye, but their abundance varies substantially year to year. To evaluate the influence of gizzard shad and rainbow smelt on walleye diets and growth in Lake Oahe, we compared recent estimates of walleye diets and growth in 2008 through 2010 with those from the late 1990s and early 2000s. Walleye diets differed seasonally with increased piscivory in July and October. In 2008, gizzard shad were the dominant prey item of walleye, representing about 60% of the diets by weight; however, by 2009, gizzard shad declined appreciably in the diet (22%) and were completely absent from walleye diets by 2010. Conversely, rainbow smelt abundance represented 12%, 27%, and 90% of walleye diets by weight in 2008, 2009 and 2010, respectively. Changes in growth corresponded to changes in diets, with the slowest growth occurring when gizzard shad were dominant in the diets and increasing growth every year thereafter. Because gizzard shad are only available during short periods (<3 months) in late summer, walleye can only achieve about 50% of their annual maintenance energy requirements from this prey source. Conversely, rainbow smelt, which are available and consumed year round, provide a continuous energy source that contributes to high growth rates. Nonetheless, when abundant, gizzard shad may provide an important subsidy to Lake Oahe walleye during periods of low rainbow smelt abundance.

Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library.

PubMed

Sánchez, Cecilia Castaño; Smith, Timothy P L; Wiedmann, Ralph T; Vallejo, Roger L; Salem, Mohamed; Yao, Jianbo; Rexroad, Caird E

2009-11-25

To enhance capabilities for genomic analyses in rainbow trout, such as genomic selection, a large suite of polymorphic markers that are amenable to high-throughput genotyping protocols must be identified. Expressed Sequence Tags (ESTs) have been used for single nucleotide polymorphism (SNP) discovery in salmonids. In those strategies, the salmonid semi-tetraploid genomes often led to assemblies of paralogous sequences and therefore resulted in a high rate of false positive SNP identification. Sequencing genomic DNA using primers identified from ESTs proved to be an effective but time consuming methodology of SNP identification in rainbow trout, therefore not suitable for high throughput SNP discovery. In this study, we employed a high-throughput strategy that used pyrosequencing technology to generate data from a reduced representation library constructed with genomic DNA pooled from 96 unrelated rainbow trout that represent the National Center for Cool and Cold Water Aquaculture (NCCCWA) broodstock population. The reduced representation library consisted of 440 bp fragments resulting from complete digestion with the restriction enzyme HaeIII; sequencing produced 2,000,000 reads providing an average 6 fold coverage of the estimated 150,000 unique genomic restriction fragments (300,000 fragment ends). Three independent data analyses identified 22,022 to 47,128 putative SNPs on 13,140 to 24,627 independent contigs. A set of 384 putative SNPs, randomly selected from the sets produced by the three analyses were genotyped on individual fish to determine the validation rate of putative SNPs among analyses, distinguish apparent SNPs that actually represent paralogous loci in the tetraploid genome, examine Mendelian segregation, and place the validated SNPs on the rainbow trout linkage map. Approximately 48% (183) of the putative SNPs were validated; 167 markers were successfully incorporated into the rainbow trout linkage map. In addition, 2% of the sequences from the

The Rainbow/Holistic Approach to Aboriginal Literacy.

ERIC Educational Resources Information Center

George, Ningwakwe Priscilla

2003-01-01

Aboriginal literacy programs in Canada are using literacy as a means of reclaiming Aboriginal languages and a positive cultural identity. The Rainbow/Holistic Approach to Aboriginal literacy uses seven ways of knowing, each corresponding to a color. The approach recognizes that spirit, heart, mind, and body equally contribute to a life of balance,…

78 FR 64283 - Requested Administrative Waiver of the Coastwise Trade Laws: Vessel RAINBOW'S END; Invitation for...

Federal Register 2010, 2011, 2012, 2013, 2014

2013-10-28

... Administrative Waiver of the Coastwise Trade Laws: Vessel RAINBOW'S END; Invitation for Public Comments AGENCY... and all documents entered into this docket is available on the World Wide Web at http://www... of the vessel RAINBOW'S END is: Intended Commercial Use Of Vessel: ``1 day to 2 week cruising...

Effects of cooking techniques on fatty acid and oxylipin content of farmed rainbow trout (Oncorhynchus mykiss)

USDA-ARS?s Scientific Manuscript database

Rainbow trout is an excellent source of long chain omega-3 polyunsaturated fatty acids (PUFA) which have beneficial health effects. We determined the fatty acid and oxylipin content of 2-year old rainbow trout fillets that were raw, baked, broiled, microwaved, or pan-fried in corn (CO), canola (CaO...

Occurrence, size, and tag retention of sneaker male hatchery rainbow trout

USGS Publications Warehouse

Isely, J.J.; Grabowski, T.B.

2004-01-01

One alternative reproductive tactic involving early-maturing, cryptic males is referred to as "sneaking." Although sneakers tend to be easily detectable upon close inspection, little is known about the proportion of a fish population consisting of sneakers. We examined 15,400 age-1 rainbow trout Oncorhynchus mykiss in a hatchery. Total length (mm), wet weight (g), and sex (sneaker male or unknown) were recorded for each fish. We also individually tagged each sneaker male with soft visual implant alphanumeric (VIalpha) tags that were sequentially numbered and held the fish for 25 d before inspection. Sneakers constituted 2.8% of the hatchery rainbow trout population and were smaller in total length and weight than typical rainbow trout of the same age. Retention of the VIalpha tags in sneakers was 58.9%, significantly lower than has been reported under similar circumstances. We found that sneaker males may contribute substantially to hatchery populations. Reduced tag retention in sneakers may bias studies evaluating the effect of hatchery fish on wild populations. We believe that hatchery-produced sneaker males have the potential to contribute importantly to the genetic composition of wild populations.

Identification of steelhead and resident rainbow trout progeny in the Deschutes River, Oregon, revealed with otolith microchemistry

USGS Publications Warehouse

Zimmerman, C.E.; Reeves, G.H.

2002-01-01

Comparisons of strontium:calcium (Sr:Ca) ratios in otolith primordia and freshwater growth regions were used to identify the progeny of steelhead Oncorhynchus mykiss (anadromous rainbow trout) and resident rainbow trout in the Deschutes River, Oregon. We cultured progeny of known adult steelhead and resident rainbow trout to confirm the relationship between Sr:Ca ratios in otolith primordia and the life history of the maternal parent. The mean (??SD) Sr:Ca ratio was significantly higher in the otolith primordia of the progeny of steelhead (0.001461 ?? 0.00029; n = 100) than in those of the progeny of resident rainbow trout (0.000829 ?? 0.000012; n = 100). We used comparisons of Sr:Ca ratios in the primordia and first-summer growth regions of otoliths to determine the maternal origin of unknown O. mykiss juveniles (n = 272) collected from rearing habitats within the main-stem Deschutes River and tributary rearing habitats and thus to ascertain the relative proportion of each life history morph in each rearing habitat. Resident rainbow trout fry dominated the bi-monthly samples collected from main-stem rearing habitats between May and November 1995. Steelhead fry dominated samples collected from below waterfalls on two tributaries in 1996 and 1998.

Improved husbandry to control an outbreak of rainbow trout fry syndrome caused by infection with Flavobacterium psychrophilum

USGS Publications Warehouse

Bebak, J.A.; Welch, T.J.; Starliper, C.E.; Baya, A.M.; Garner, M.M.

2007-01-01

Case Description - A cohort of 35,200, 13-week-old, female rainbow trout at a fish farm was evaluated because of a 2-week history of anorexia and lethargy and a mortality rate of approximately 100 fish/d. Clinical Findings - Affected fish were lethargic and thin and had disequilibrium, bilateral exophthalmia, pale red gills and kidneys, red-tinged coelomic fluid, and pale brown livers. Some fish were differentially pigmented bilaterally. The presumptive diagnosis was bacterial or viral septicemia. The definitive diagnosis was rainbow trout fry syndrome caused by infection with Flavobacterium psychrophilum. Treatment and Outcome - A strategy for controlling the outbreak based on reducing pathogen numbers in affected tanks and reducing pathogen spread among tanks was developed. The option of treating with antimicrobial-medicated feed was discussed with the farmer, but was declined. After changes were made, mortality rate declined quickly, with no more deaths within 10 days after the initial farm visit. Clinical Relevance - Bacterial coldwater disease is the most common manifestation of infection with F psychrophilum in fingerling and adult rainbow trout. However, the organism can also cause rainbow trout fry syndrome. This condition should be included on a list of differential diagnoses for septicemia in hatchery-reared rainbow trout fry.

Role of the GH-IGF-1 system in Atlantic salmon and rainbow trout postsmolts at elevated water temperature.

PubMed

Hevrøy, Ernst M; Tipsmark, Christian K; Remø, Sofie C; Hansen, Tom; Fukuda, Miki; Torgersen, Thomas; Vikeså, Vibeke; Olsvik, Pål A; Waagbø, Rune; Shimizu, Munetaka

2015-10-01

A comparative experiment with Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss) postsmolts was conducted over 35 days to provide insight into how growth, respiration, energy metabolism and the growth hormone (GH) and insulin-like growth factor 1 (IGF-1) system are regulated at elevated sea temperatures. Rainbow trout grew better than Atlantic salmon, and did not show reduced growth at 19 °C. Rainbow trout kept at 19 °C had increased blood hemoglobin concentration compared to rainbow trout kept at 13 °C, while salmon did not show the same hemoglobin response due to increased temperature. Both species showed reduced length growth and decreased muscle glycogen stores at 19 °C. Circulating IGF-1 concentration was higher in rainbow trout than in Atlantic salmon, but was not affected by temperature in either species. Plasma IGF-binding protein 1b (IGFBP-1b) concentration was reduced in Atlantic salmon reared at 19 °C after 15 days but increased in rainbow trout at 19 °C after 35 days. The igfbp1b mRNA level in liver showed a positive correlation to plasma concentrations of glucose and IGFBP-1b, suggesting involvement of this binding protein in carbohydrate metabolism at 19 °C. At this temperature muscle igfbp1a mRNA was down-regulated in both species. The muscle expression of this binding protein correlated negatively with muscle igf1 and length growth. The plasma IGFBP-1b concentration and igfbp1b and igfbp1a expression suggests reduced muscle igf1 signaling at elevated temperature leading to glucose allostasis, and that time course is species specific due to higher thermal tolerance in rainbow trout. Copyright © 2015 Elsevier Inc. All rights reserved.

Accurate genomic predictions for BCWD resistance in rainbow trout are achieved using low-density SNP panels: Evidence that long-range LD is a major contributing factor.

PubMed

Vallejo, Roger L; Silva, Rafael M O; Evenhuis, Jason P; Gao, Guangtu; Liu, Sixin; Parsons, James E; Martin, Kyle E; Wiens, Gregory D; Lourenco, Daniela A L; Leeds, Timothy D; Palti, Yniv

2018-06-05

Previously accurate genomic predictions for Bacterial cold water disease (BCWD) resistance in rainbow trout were obtained using a medium-density single nucleotide polymorphism (SNP) array. Here, the impact of lower-density SNP panels on the accuracy of genomic predictions was investigated in a commercial rainbow trout breeding population. Using progeny performance data, the accuracy of genomic breeding values (GEBV) using 35K, 10K, 3K, 1K, 500, 300 and 200 SNP panels as well as a panel with 70 quantitative trait loci (QTL)-flanking SNP was compared. The GEBVs were estimated using the Bayesian method BayesB, single-step GBLUP (ssGBLUP) and weighted ssGBLUP (wssGBLUP). The accuracy of GEBVs remained high despite the sharp reductions in SNP density, and even with 500 SNP accuracy was higher than the pedigree-based prediction (0.50-0.56 versus 0.36). Furthermore, the prediction accuracy with the 70 QTL-flanking SNP (0.65-0.72) was similar to the panel with 35K SNP (0.65-0.71). Genomewide linkage disequilibrium (LD) analysis revealed strong LD (r 2  ≥ 0.25) spanning on average over 1 Mb across the rainbow trout genome. This long-range LD likely contributed to the accurate genomic predictions with the low-density SNP panels. Population structure analysis supported the hypothesis that long-range LD in this population may be caused by admixture. Results suggest that lower-cost, low-density SNP panels can be used for implementing genomic selection for BCWD resistance in rainbow trout breeding programs. © 2018 The Authors. This article is a U.S. Government work and is in the public domain in the USA. Journal of Animal Breeding and Genetics published by Blackwell Verlag GmbH.

IN VIVO RATE OF PHENOL GLUCURONIDATION BY RAINBOW TROUT

EPA Science Inventory

Induction of vitellogenin (VTG) in male fish has become an accepted biomarker for xenoestrogenicity. This study utilized the male rainbow trout liver slice model to determine the estrogenicity of parent compound, methoxychlor (MXC) and metabolites, di-hydroxy methoxychlor (HPTE) ...

Biomagnification and tissue distribution of perfluoroalkyl substances (PFASs) in market-size rainbow trout (Oncorhynchus mykiss).

PubMed

Goeritz, Ina; Falk, Sandy; Stahl, Thorsten; Schäfers, Christoph; Schlechtriem, Christian

2013-09-01

The present study investigated the biomagnification potential as well as the substance and tissue-specific distribution of perfluoroalkyl substances (PFASs) in market-size rainbow trout (Oncorhynchus mykiss). Rainbow trout with an average body weight of 314 ± 21 g were exposed to perfluorobutane sulfonate (PFBS), perfluorohexane sulfonate (PFHxS), perfluorooctane sulfonate (PFOS), perfluorooctanoic acid (PFOA), and perfluorononanoic acid (PFNA) in the diet for 28 d. The accumulation phase was followed by a 28-d depuration phase, in which the test animals were fed with nonspiked trout feed. On days 0, 7, 14, 28, 31, 35, 42, and 56 of the present study, fish were sampled from the test basin for PFAS analysis. Biomagnification factors (BMFs) for all test compounds were determined based on a kinetic approach. Distribution factors were calculated for each test compound to illustrate the disposition of PFASs in rainbow trout after 28 d of exposure. Dietary exposure of market-size rainbow trout to PFASs did not result in biomagnification; BMF values were calculated as 0.42 for PFOS, >0.23 for PFNA, >0.18 for PFHxS, >0.04 for PFOA, and >0.02 for PFBS, which are below the biomagnification threshold of 1. Liver, blood, kidney, and skin were identified as the main target tissues for PFASs in market-size rainbow trout. Evidence was shown that despite relative low PFAS contamination, the edible parts of the fish (the fillet and skin) can significantly contribute to the whole-body burden. Copyright © 2013 SETAC.

Toxicokinetics of perfluorooctane sulfonate in rainbow trout (Oncorhynchus mykiss)

EPA Science Inventory

Rainbow trout (Oncorhynchus mykiss) confined to respirometer-metabolism chambers were dosed with perfluorooctane sulfonate (PFOS) by intra-arterial injection and sampled to obtain concentration time-course data for plasma, and either urine or expired water. The data were then an...

Effects of frying in various cooking oils on fatty acid content of farmed rainbow trout (Oncorhynchus mykiss)

USDA-ARS?s Scientific Manuscript database

Our goal was to describe the effects of frying with various oils on the fatty acid content of rainbow trout. Four different oils were evaluated (peanut oil, high oleic sunflower oil, corn oil, and canola oil). Farmed rainbow trout (Oncorhynchus mykiss) fillets were sliced into three portions and eac...

Intracellular diffusion restrictions in isolated cardiomyocytes from rainbow trout.

PubMed

Sokolova, Niina; Vendelin, Marko; Birkedal, Rikke

2009-12-17

Restriction of intracellular diffusion of adenine nucleotides has been studied intensively on adult rat cardiomyocytes. However, their cause and role in vivo is still uncertain. Intracellular membrane structures have been suggested to play a role. We therefore chose to study cardiomyocytes from rainbow trout (Oncorhynchus mykiss), which are thinner and have fewer intracellular membrane structures than adult rat cardiomyocytes. Previous studies suggest that trout permeabilized cardiac fibers also have diffusion restrictions. However, results from fibers may be affected by incomplete separation of the cells. This is avoided when studying permeabilized, isolated cardiomyocytes. The aim of this study was to verify the existence of diffusion restrictions in trout cardiomyocytes by comparing ADP-kinetics of mitochondrial respiration in permeabilized fibers, permeabilized cardiomyocytes and isolated mitochondria from rainbow trout heart. Experiments were performed at 10, 15 and 20 degrees C in the absence and presence of creatine. Trout cardiomyocytes hypercontracted in the solutions used for mammalian cardiomyocytes. We developed a new solution in which they retained their shape and showed stable steady state respiration rates throughout an experiment. The apparent ADP-affinity of permeabilized cardiomyocytes was different from that of fibers. It was higher, independent of temperature and not increased by creatine. However, it was still about ten times lower than in isolated mitochondria. The differences between fibers and cardiomyocytes suggest that results from trout heart fibers were affected by incomplete separation of the cells. However, the lower ADP-affinity of cardiomyocytes compared to isolated mitochondria indicate that intracellular diffusion restrictions are still present in trout cardiomyocytes despite their lower density of intracellular membrane structures. The lack of a creatine effect indicates that trout heart lacks mitochondrial creatine kinase tightly

Effects of increased discharge on spawning and age-0 recruitment of rainbow trout in the Colorado River at Lees Ferry, Arizona

USGS Publications Warehouse

Avery, Luke A.; Korman, Josh; Persons, William R.

2015-01-01

Negative interactions of Rainbow Trout Oncorhynchus mykiss with endangered Humpback Chub Gila cypha pose challenges to the operation of Glen Canyon Dam (GCD) to manage for both species in the Colorado River. Operations to enhance the Rainbow Trout tailwater fishery may lead to an increase in downstream movement of the trout to areas where they are likely to interact with Humpback Chub. We evaluated the effects of dam operations on age-0 Rainbow Trout in the tailwater fishery to inform managers about how GCD operations could benefit a tailwater fishery for Rainbow Trout; although this could affect a Humpback Chub population farther downstream. A near year-long increase in discharge at GCD in 2011 enabled us to evaluate whether high and stable flows led to increased spawning and production of age-0 Rainbow Trout compared with other years. Rainbow Trout spawning was monitored by fitting a model to observed redd counts to estimate the number of redds created over a spawning season. Data collected during electrofishing trips in July–September and November were used to acquire age-0 trout population and mortality rate estimates. We found that high and stable flows in 2011 resulted in 3,062 redds (1.7 times the mean of all survey years) and a population estimate of 686,000 age-0 Rainbow Trout (second highest on record). Despite high initial abundance, mortality remained low through the year (0.0043%/d) resulting in significant recruitment with a record high November population estimate of 214,000 age-0 Rainbow Trout. Recent monitoring indicates this recruitment event was followed by an increase in downstream migration, which may lead to increased interactions with downstream populations of Humpback Chub. Consequently, while our results indicate that manipulating flow at GCD can be used to manage Rainbow Trout spawning and recruitment, fisheries managers should use flow manipulation in moderation to minimize downstream migration in order to reduce negative

UPTAKE AND ELIMINATION OF DICHLOROACETIC ACID BY RAINBOW TROUT

EPA Science Inventory

Dichloroacetic acid (DCA) is a by-product of drinking water chlorination and is a hepatocarcinogen in rodents. Preliminary results of a chronic testing effort with Japanese medaka suggest the possibility of similar effects is fish. Adult rainbow trout were cannulated from the dor...

Rainbow Pool, Eastern portion of West Potomac Park; bounded by ...

Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

Rainbow Pool, Eastern portion of West Potomac Park; bounded by Elm Walks to the north and south, Seventeenth Street to the east and the Reflecting Pool to the west, Washington, District of Columbia, DC

Exact solutions and phenomenological constraints from massive scalars in a gravity's rainbow spacetime

NASA Astrophysics Data System (ADS)

Bezerra, V. B.; Christiansen, H. R.; Cunha, M. S.; Muniz, C. R.

2017-07-01

We obtain the exact (confluent Heun) solutions to the massive scalar field in a gravity's rainbow Schwarzschild metric. With these solutions at hand, we study the Hawking radiation resulting from the tunneling rate through the event horizon. We show that the emission spectrum obeys nonextensive statistics and is halted when a certain mass remnant is reached. Next, we infer constraints on the rainbow parameters from recent LHC particle physics experiments and Hubble STIS astrophysics measurements. Finally, we study the low frequency limit in order to find the modified energy spectrum around the source.

Facilitating Career Development through Super's Life Career Rainbow.

ERIC Educational Resources Information Center

Okocha, Aneneosa A.

Super's life-span life-space theory offers a developmental framework for career counseling. This paper provides a brief overview of Super's theory of Life Career Rainbow (LCR) segment. The LCR feature is useful for identifying the stage of a client's career development and in formulating goals for counseling. The assessment is accomplished by…

RAINBOW LAKE WILDERNESS AND FLYNN LAKE WILDERNESS STUDY AREA, WISCONSIN.

USGS Publications Warehouse

Cannon, W.F.; Dunn, Maynard L.

1984-01-01

The Rainbow Lake Wilderness and Flynn Lake Wilderness study area in Wisconsin are contiguous and were studied as a unit. The rainbow Lake Wilderness contains a demonstrated resource of about 210,000 tons of commercial-quality peat in an area of substantiated peat resource potential. The Flynn Lake Wilderness study area contains a demonstrated resource of about 300,000 tons of commercial-quality peat in an area of substantiated peat resource potential. These deposits, however, are of limited importance because larger deposits of similar material are abundant outside the areas, closer to present markets. Rocks in the subsurface contain a low-grade copper resource identified by mining company exploration drilling. Although this is an area of substantiated copper resource potential, it is a low-grade resource, thin and generally at great depth.

Gyrodactylid Ectoparasites in a Population of Rainbow Trout (Oncorhynchus mykiss)

PubMed Central

Garcia, Rachel L; Hansen, Adam G; Chan, Maia M; Sanders, George E

2014-01-01

A colony of rainbow trout (Oncorhynchus mykiss) in a decentralized aquatic animal facility was noted to have an increase in morbidity and mortality (from 4 or 5 fish each month to 3 or 4 fish daily) approximately 2 wk after experimental procedures began. The primary clinical signs were erratic swimming behavior and ‘flashing’ of fish against surfaces within housing enclosures. Moribund and normal rainbow trout were presented alive for diagnostic evaluation; samples of water from housing enclosures were provided for water quality assessment. The trout were determined to be infected with gyrodactylids, a common monogenean ectoparasite of the skin and gills in both marine and freshwater fish. This case report describes the diagnosis, pathology, and treatment of gyrodactylids and husbandry modifications associated with the resolution of this clinical aquatic-animal case. PMID:24411786

Local Seismicity of the Rainbow Massif on the Mid-Atlantic Ridge

NASA Astrophysics Data System (ADS)

Horning, G.; Sohn, R. A.; Canales, J. P.; Dunn, R. A.

2018-02-01

The Rainbow massif, an oceanic core complex located in a nontransform discontinuity on the Mid-Atlantic Ridge (36°N), is notable for hosting high-temperature hydrothermal discharge through ultramafic rocks. Here we report results from a 9 month microearthquake survey conducted with a network of 13 ocean bottom seismometers deployed on and around the Rainbow massif as part of the MARINER experiment in 2013-2014. High rates ( 300 per day) of low-magnitude (average ML 0.5) microearthquakes were detected beneath the massif. The hypocenters do not cluster along deeply penetrating fault surfaces and do not exhibit mainshock/aftershock sequences, supporting the hypothesis that the faulting associated with the exhumation of the massif is currently inactive. Instead, the hypocenters demarcate a diffuse zone of continuous, low-magnitude deformation at relatively shallow (< 3 km) depths beneath the massif, sandwiched in between the seafloor and seismic reflectors interpreted to be magmatic sills driving hydrothermal convection. Most of the seismicity is located in regions where seismic refraction data indicate serpentinized ultramafic host rock, and although the seismic network we deployed was not capable of constraining the focal mechanism of most events, our analysis suggests that serpentinization may play an important role in microearthquake generation at the Rainbow massif.

The 1954 Rainbow Mountain-Fairview Peak-Dixie Valley earthquakes: A triggered normal faulting sequence

NASA Astrophysics Data System (ADS)

Hodgkinson, Kathleen M.; Stein, Ross S.; King, Geoffrey C. P.

1996-11-01

In 1954, four earthquakes of M > 6.0 occurred within a 30 km radius in a period of six months. The Rainbow Mountain-Fairview Peak-Dixie Valley earthquakes are among the largest to have been recorded geodetically in the Basin and Range province. The Fairview Peak earthquake (M = 7.2, December 12, 1954) followed two events in the Rainbow Mountains (M = 6.2, July 6, and M = 6.5, August 24, 1954) by 6 months. Four minutes later the Dixie Valley fault ruptured (M = 6.7, December 12, 1954). The changes in static stresses caused by the events are calculated using the Coulomb-Navier failure criterion and assuming uniform slip on rectangular dislocations embedded in an elastic half-space. Coulomb stress changes are resolved on optimally oriented faults and on each of the faults that ruptured in the chain of events. These calculations show that each earthquake in the Rainbow Mountain-Fairview Peak-Dixie Valley sequence was preceded by a static stress change that encouraged failure. The magnitude of the stress increases transferred from one earthquake to another ranged from 0.01 MPa (0.1 bar) to over 0.1 MPa (1 bar). Stresses were reduced by up to 0.1 MPa over most of the Rainbow Mountain-Fairview Peak area as a result of the earthquake sequence.

Modified TOV in gravity’s rainbow: properties of neutron stars and dynamical stability conditions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hendi, S.H.; Research Institute for Astronomy and Astrophysics of Maragha; Bordbar, G.H.

In this paper, we consider a spherical symmetric metric to extract the hydrostatic equilibrium equation of stars in (3+1)-dimensional gravity’s rainbow in the presence of cosmological constant. Then, we generalize the hydrostatic equilibrium equation to d-dimensions and obtain the hydrostatic equilibrium equation for this gravity. Also, we obtain the maximum mass of neutron star using the modern equations of state of neutron star matter derived from the microscopic calculations. It is notable that, in this paper, we consider the effects of rainbow functions on the diagrams related to the mass-central mass density (M-ρ{sub c}) relation and also the mass-radius (M-R)more » relation of neutron star. We also study the effects of rainbow functions on the other properties of neutron star such as the Schwarzschild radius, average density, strength of gravity and gravitational redshift. Then, we apply the cosmological constant to this theory to obtain the diagrams of M-ρ{sub c} (or M-R) and other properties of these stars. Next, we investigate the dynamical stability condition for these stars in gravity’s rainbow and show that these stars have dynamical stability. We also obtain a relation between mass of neutron stars and Planck mass. In addition, we compare obtained results of this theory with the observational data.« less

The 1954 Rainbow Mountain-Fairview Peak-Dixie Valley earthquakes: A triggered normal faulting sequence

USGS Publications Warehouse

Hodgkinson, K.M.; Stein, R.S.; King, G.C.P.

1996-01-01

In 1954, four earthquakes of M > 6.0 occurred within a 30 km radius in a period of six months. The Rainbow Mountain-Fairview Peak-Dixie Valley earthquakes are among the largest to have been recorded geodetically in the Basin and Range province. The Fairview Peak earthquake (M=7.2, December 12, 1954) followed two events in the Rainbow Mountains (M=6.2, July 6, and M=6.5, August 24, 1954) by 6 months. Four minutes later the Dixie Valley fault ruptured (M=6.7, December 12, 1954). The changes in static stresses caused by the events are calculated using the Coulomb-Navier failure criterion and assuming uniform slip on rectangular dislocations embedded in an elastic half-space. Coulomb stress changes are resolved on optimally oriented faults and on each of the faults that ruptured in the chain of events. These calculations show that each earthquake in the Rainbow Mountain-Fairview Peak-Dixie Valley sequence was preceded by a static stress change that encouraged failure. The magnitude of the stress increases transferred from one earthquake to another ranged from 0.01 MPa (0.1 bar) to over 0.1 MPa (1 bar). Stresses were reduced by up to 0.1 MPa over most of the Rainbow Mountain-Fairview Peak area as a result of the earthquake sequence. Copyright 1996 by the American Geophysical Union.

Transcriptome Assembly, Gene Annotation and Tissue Gene Expression Atlas of the Rainbow Trout

PubMed Central

Salem, Mohamed; Paneru, Bam; Al-Tobasei, Rafet; Abdouni, Fatima; Thorgaard, Gary H.; Rexroad, Caird E.; Yao, Jianbo

2015-01-01

Efforts to obtain a comprehensive genome sequence for rainbow trout are ongoing and will be complemented by transcriptome information that will enhance genome assembly and annotation. Previously, transcriptome reference sequences were reported using data from different sources. Although the previous work added a great wealth of sequences, a complete and well-annotated transcriptome is still needed. In addition, gene expression in different tissues was not completely addressed in the previous studies. In this study, non-normalized cDNA libraries were sequenced from 13 different tissues of a single doubled haploid rainbow trout from the same source used for the rainbow trout genome sequence. A total of ~1.167 billion paired-end reads were de novo assembled using the Trinity RNA-Seq assembler yielding 474,524 contigs > 500 base-pairs. Of them, 287,593 had homologies to the NCBI non-redundant protein database. The longest contig of each cluster was selected as a reference, yielding 44,990 representative contigs. A total of 4,146 contigs (9.2%), including 710 full-length sequences, did not match any mRNA sequences in the current rainbow trout genome reference. Mapping reads to the reference genome identified an additional 11,843 transcripts not annotated in the genome. A digital gene expression atlas revealed 7,678 housekeeping and 4,021 tissue-specific genes. Expression of about 16,000–32,000 genes (35–71% of the identified genes) accounted for basic and specialized functions of each tissue. White muscle and stomach had the least complex transcriptomes, with high percentages of their total mRNA contributed by a small number of genes. Brain, testis and intestine, in contrast, had complex transcriptomes, with a large numbers of genes involved in their expression patterns. This study provides comprehensive de novo transcriptome information that is suitable for functional and comparative genomics studies in rainbow trout, including annotation of the genome. PMID

Determination of malachite green residues in the eggs, fry, and adult muscle-tissue of rainbow-trout (Oncorhynchus-mykiss)

USGS Publications Warehouse

Allen, John L.; Gofus, J.E.; Meinertz, Jeffery R.

1994-01-01

Malachite green, an effective antifungal therapeutant used in fish culture, is a known teratogen. We developed a method to simultaneously detect both the chromatic and leuco forms of malachite green residues in the eggs, fry, and adult muscle tissue of rainbow trout (oncorhynchus mykiss). Homogenates of these tissues were fortified with [c-14] malachite green chloride and extracted with 1% (v/v) acetic acid in acetonitrile or in methanol. The extracts were partitioned with chloroform, dried, redissolved in mobile phase, and analyzed by liquid chromatography (lc) with postcolumn oxidation of leuco malachite green to the chromatic form. Lc fractions were collected every 30 s for quantitation by scintillation counting. Recoveries of total [c-14] malachite green chloride residue were 85 and 98% in eggs fortified with labeled malachite green at concentrations of 0.5 And 1.00 Mug/g, respectively; 68% in fry similarly fortified at a concentration of 0.65 Mug/g; and 66% in muscle homogenate similarly fortified at a level of 1.00 Mug/g. The method was tested under operational conditions by exposing adult rainbow trout to 1.00 Mg/l [c-14] malachite green chloride bath for 1 h. Muscle samples analyzed by sample oxidation and scintillation counting contained 1.3 And 0.5 Mug/g total malachite green chloride residues immediately after exposure and after a 5-day withdrawal period, respectively.

Chronic bioassays of rainbow trout fry with compounds representative of contaminants in Great Lakes fish

USGS Publications Warehouse

Passino-Reader, Dora R.; Berlin, William H.; Hickey, James P.

1995-01-01

To evaluate the hazard of organic compounds detected in Great Lakes fish by gas chromatography/mass spectrometry, we tested compounds representative of heterocyclic nitrogen compounds, polycyclic aromatic hydrocarbons, and cyclic alkanes and alkenes. Sixty-day bioassays on the effects of nicotine, phenanthrene, pinane, and pinene on the behavior, growth, and survival of rainbow trout fry, Oncorhynchus mykiss, were conducted in a large, constant-flow, temperature-controlled water system. The following 60-day LCSO's were determined (mg/L): nicotine 5.0, phenanthrene 0.2, pinane 0.8, and pinene 1.2. Values of lowest observed effects level (LOEL) and no observed effects level (NOEL) showed that growth was generally as sensitive an endpoint as behavior and was more sensitive than time of swim-up. The 60-day LC50 values for rainbow trout were compared with earlier acute bioassays with Daphnia pulexand rainbow trout and chronic bioassays with D.pulex conducted at the Great Lakes Science Center. Rainbow trout fry were less sensitive than daphnids in all tests, indicating that toxicity tests with daphnids should be protective of salmonid fry for these types of compounds. The results for representative compounds indicate that these classes of compounds should be included in aquatic risk assessments at sites in the Great Lakes.

Size and age structure of anadromous and landlocked populations of Rainbow Smelt

USGS Publications Warehouse

O'Malley, Andrew; Enterline, Claire; Zydlewski, Joseph D.

2017-01-01

Rainbow Smelt Osmerus mordax are widely distributed in both anadromous and landlocked populations throughout northeastern North America; abundance, size at age, and maximum size vary widely among populations and life histories. In the present study, size at age, von Bertalanffy growth parameters, population age distributions, and precision and bias in age assessment based on scales and sectioned otoliths were compared between ecotypes and among populations of Rainbow Smelt. To compare the ecotypes, we collected spawning adults from four anadromous and three landlocked populations in Maine during spring 2014. A significant bias was identified in only one of four scale comparisons but in four of seven otolith comparisons; however, a comparable level of precision was indicated. Anadromous populations had larger and more variable size at age and von Bertalanffy growth parameters than landlocked fish. Populations were composed of ages 1–4; six populations were dominated by age-2 or age-3 individuals, and one population was dominated by age-1 fish. These data suggest the presence of considerable plasticity among populations. A latitudinal gradient was observed in the anadromous Rainbow Smelt, which may show signs of population stress at the southern extent of their distribution.

Rapid loss of lampricide from catfish and rainbow trout following routine treatment

USGS Publications Warehouse

Dawson, V.K.; Schreier, Theresa M.; Boogaard, M.A.; Spanjers, N.J.; Gingerich, W.H.

2002-01-01

Rainbow trout (Oncorhynchus mykiss) and channel catfish (Ictalurus punctatus) were exposed to 3-trifluoromethyl-4-nitrophenol (TFM) and Bayluscide (niclosamide) during a sea lamprey control treatment of the Ford River, located in the upper peninsula of Michigan. Caged fish were exposed to a nominal concentration of 0.02 mg/L of niclosamide for a period of approximately 12 h. Samples of fillet tissue were collected from each fish species before treatment and at 6, 12, 18, 24, 48, 96, and 192 h following the arrival of the block of chemical at the exposure site. The fish were dissected, homogenized, extracted, and analyzed by high-performance liquid chromatography. The major residues found in the fillet tissues were TFM and niclosamide. Niclosamide concentrations were highest 12 h after arrival of the chemical block for rainbow trout (0.0395 ?? 0.0251 ??g/g) and 18 h after arrival of the chemical block for channel catfish (0.0465 ?? 0.0212 ??g/g). Residues decreased rapidly after the block of lampricide had passed and were below the detection limits in fillets of rainbow trout within 24 h and channel catfish within 96 h after the arrival of the lampricide.

Identification of mitochondrial genome-encoded small RNAs related to egg deterioration caused by postovulatory aging in rainbow trout

USDA-ARS?s Scientific Manuscript database

Many factors have been reported to affect rainbow trout egg quality, among which, postovulatory aging is one of the most significant causes as reared rainbow trout do not usually volitionally oviposit the ovulated eggs. In order to uncover the genetic regulation underling egg deterioration caused by...

A Simple Text File for Curing Rainbow Blindness

NASA Technical Reports Server (NTRS)

Krylo, Robert; Tomlin, Marilyn; Seager, Michael

2008-01-01

This slide presentation reviews the use of a simple text file to work with large, multi-component thermal models that present a post-processing challenge. This complexity is due to temperatures for many components, with varying requirements, need to be examined and that false color temperature maps, or rainbows, provide a qualitative assessment of results.

Comparative analysis of innate immune responses to Streptococcus phocae strains in Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss).

PubMed

Salazar, Soraya; Oliver, Cristian; Yáñez, Alejandro J; Avendaño-Herrera, Ruben

2016-04-01

Streptococcus phocae subsp. salmonis is a Gram-positive bacterium that causes mortality only in Atlantic salmon (Salmo salar) farmed in Chile, even when this species is co-cultured with rainbow trout (Oncorhynchus mykiss). This susceptibility could be determined by innate immune response components and their responses to bacterial infection. This fish pathogen shares subspecies status with Streptococcus phocae subsp. phocae isolated from seals. The present study compared innate immune system mechanisms in Atlantic salmon and rainbow trout when challenged with different S. phocae, including two isolates from Atlantic salmon (LM-08-Sp and LM-13-Sp) and two from seal (ATCC 51973(T) and P23). Streptococcus phocae growth was evaluated in the mucus and serum of both species, with rainbow trout samples evidencing inhibitory effects. Lysozyme activity supported this observation, with significantly higher (p < 0.01) expression in rainbow trout serum and mucus as compared to Atlantic salmon. No differences were found in phagocytic capacity between fish species when stimulated with ATCC 51973(T) and P23. Against all S. phocae strains, rainbow trout and Atlantic salmon showed up to two-fold increased bactericidal activity, and rainbow trout demonstrated up to three-fold greater reactive oxygen species production in macrophages. In conclusion, the non-specific humoral and cellular barriers of Atlantic salmon were immunologically insufficient against S. phocae subsp. salmonis, thereby facilitating streptococcosis. Moreover, the more robust response of rainbow trout to S. phocae could not be attributed to any specific component of the innate immune system, but was rather the consequence of a combined response by the evaluated components. Copyright © 2016 Elsevier Ltd. All rights reserved.

Selective breeding of food sized rainbow trout against Flavobacteriosis

USDA-ARS?s Scientific Manuscript database

Selective breeding of rainbow trout is an important component of an integrated fish health management program. The current goals of our selective breeding program are to improve disease resistance, growth and survival in a reuse water environment. To improve these traits, data are recorded on thousa...

Selective breeding of food size rainbow trout against Flavobacteriosis

USDA-ARS?s Scientific Manuscript database

Selective breeding of rainbow trout is an important component of an integrated fish health management program. The current goals of our selective breeding program are to improve disease resistance, growth and survival in a reuse water environment. To improve these traits, data are recorded on thousa...

Gene expression dynamics during embryonic development in rainbow trout

USDA-ARS?s Scientific Manuscript database

The supply of maternal RNAs in fertilized egg and activation of embryonic genome during maternal-zygotic transition (MZT) are important for normal embryonic development. In order to identify genes and gene products that are essential in the regulation of embryonic development in rainbow trout, RNA-S...

Retroreflective Background Oriented Schlieren Imaging Results from the NASA Plume/Shock Interaction Test

NASA Technical Reports Server (NTRS)

Smith, Nathanial T.; Durston, Donald A.; Heineck, James T.

2017-01-01

In support of NASA's Commercial Supersonics Technology (CST) project, a test was conducted in the 9-by-7 ft. supersonic section of the NASA Ames Unitary Plan Wind Tunnel (UPWT). The tests were designed to study the interaction of shocks with a supersonic jet characteristic of those that may occur on a commercial supersonic aircraft. Multiple shock generating geometries were tested to examine the interaction dynamics as they pertain to sonic boom mitigation. An integral part of the analyses of these interactions are the interpretation of the data generated from the retroreflective Background Oriented Schlieren (RBOS) imaging technique employed for this test. The regularization- based optical flow methodology used to generate these data is described. Sample results are compared to those using normalized cross-correlation. The reduced noise, additional feature detail, and fewer false artifacts provided by the optical flow technique produced clearer time-averaged images, allowing for better interpretation of the underlying flow phenomena. These images, coupled with pressure signatures in the near field, are used to provide an overview of the detailed interaction flowfields.

Effects of intermittent chlorination on rainbow trout and yellow perch

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brooks, A.S.; Seegert, G.L.

1977-05-01

Rainbow trout, Salmo gairdneri, and yellow perch, Perca flavescens, were exposed to residual chlorine for single 30-minute and triple 5-minute doses. Tests were conducted at 10, 15, and 20 C with both species plus 25 and 30 C for the perch. Single exposure 30-minute LC50 values for the perch ranged from 0.70 mg/liter at 30 C to 8.0 mg/liter at 10 C. Triple 5-minute exposure LC50 values for the perch were 22.6 and 9.0 mg/liter at 10 and 20 C, respectively. Rainbow trout 30-minute LC50 values were 0.99 and 0.94 mg/liter at 10 and 15 C, respectively. Two groups ofmore » trout tested at 20 C yielded 30-minute LC50 values of 0.60 and 0.43 mg/liter. Triple exposure 5-minute LC50 values for the trout were 2.87 mg/liter at 10 C and 1.65 mg/liter at 20 C. Mortality occurred immediately after exposure to chlorine in the 30-minute perch tests at 10 and 15 C, but was delayed 2 to 12 hours at the higher temperatures. This pattern was reversed in the 5-minute triple exposure tests. Rainbow trout exhibited rapid mortality in all tests except the 10 C triple exposure series where mortality was delayed 12 to 24 hours. For both species, concentrations resulting in no mortality were approximately one-half the LC50 value.« less

Thermodynamic phase transition in the rainbow Schwarzschild black hole

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gim, Yongwan; Kim, Wontae, E-mail: yongwan89@sogang.ac.kr, E-mail: wtkim@sogang.ac.kr

2014-10-01

We study the thermodynamic phase transition in the rainbow Schwarzschild black hole where the metric depends on the energy of the test particle. Identifying the black hole temperature with the energy from the modified dispersion relation, we obtain the modified entropy and thermodynamic energy along with the modified local temperature in the cavity to provide well defined black hole states. It is found that apart from the conventional critical temperature related to Hawking-Page phase transition there appears an additional critical temperature which is of relevance to the existence of a locally stable tiny black hole; however, the off-shell free energymore » tells us that this black hole should eventually tunnel into the stable large black hole. Finally, we discuss the reason why the temperature near the horizon is finite in the rainbow black hole by employing the running gravitational coupling constant, whereas it is divergent near the horizon in the ordinary Schwarzschild black hole.« less

Rainbows without unicorns: metric structures in theories with modified dispersion relations

NASA Astrophysics Data System (ADS)

Lobo, Iarley P.; Loret, Niccoló; Nettel, Francisco

2017-07-01

Rainbow metrics are a widely used approach to the metric formalism for theories with modified dispersion relations. They have had a huge success in the quantum gravity phenomenology literature, since they allow one to introduce momentum-dependent space-time metrics into the description of systems with a modified dispersion relation. In this paper, we introduce the reader to some realizations of this general idea: the original rainbow metrics proposal, the momentum-space-inspired metric and a Finsler geometry approach. As the main result of this work we also present an alternative definition of a four-velocity dependent metric which allows one to handle the massless limit. This paper aims to highlight some of their properties and how to properly describe their relativistic realizations.

A trial of two trouts: Comparing the impacts of rainbow and brown trout on a native galaxiid

USGS Publications Warehouse

Young, K.A.; Dunham, J.B.; Stephenson, J.F.; Terreau, A.; Thailly, A.F.; Gajardo, G.; de Leaniz, C. G.

2010-01-01

Rainbow trout Oncorhynchus mykiss and brown trout Salmo trutta are the world's two most widespread exotic fishes, dominate the fish communities of most cold-temperate waters in the southern hemisphere and are implicated in the decline and extirpation of native fish species. Here, we provide the first direct comparison of the impacts of rainbow and brown trout on populations of a native fish by quantifying three components of exotic species impact: range, abundance and effect. We surveyed 54 small streams on the island of Chilo?? in Chilean Patagonia and found that the rainbow trout has colonized significantly more streams and has a wider geographic range than brown trout. The two species had similar post-yearling abundances in allopatry and sympatry, and their abundances depended similarly on reach-level variation in the physical habitat. The species appeared to have dramatically different effects on native drift-feeding Aplochiton spp., which were virtually absent from streams invaded by brown trout but shared a broad sympatric range with rainbow trout. Within this range, the species' post-yearling abundances varied independently before and after controlling for variation in the physical habitat. In the north of the island, Aplochiton spp. inhabited streams uninvaded by exotic trouts. Our results provide a context for investigating the mechanisms responsible for apparent differences in rainbow and brown trout invasion biology and can help inform conservation strategies for native fishes in Chilo?? and elsewhere. ?? 2010 The Authors. Journal compilation ?? 2010 The Zoological Society of London.

Improving the Rainbow Attack by Reusing Colours

NASA Astrophysics Data System (ADS)

Ågren, Martin; Johansson, Thomas; Hell, Martin

Hashing or encrypting a key or a password is a vital part in most network security protocols. The most practical generic attack on such schemes is a time memory trade-off attack. Such an attack inverts any one-way function using a trade-off between memory and execution time. Existing techniques include the Hellman attack and the rainbow attack, where the latter uses different reduction functions ("colours") within a table.

METHOXYCHLOR METABOLISM AND VITELLOGENINESIS IN MALE RAINBOW TROUT LIVER SLICES

EPA Science Inventory

Induction of vitellogenesis (VTG) in male fish has become an accepted biomarker for xenoestrogenicity. This study utilized the male rainbow trout liver slice model to determine the estrogenicity of parent compound, methoxychlor (MXC) and metabolites, di-hydroxy methoxychlor (HPTE...

Differences in growth, fillet quality, and fatty acid metabolism-related gene expression between juvenile male and female rainbow trout

USDA-ARS?s Scientific Manuscript database

Sexual maturation occurs at the expense of stored energy and nutrients, including lipids; however, little is known regarding gender effects on nutrient regulatory mechanisms in rainbow trout prior to maturity. Thirty-two, 14 month old, male and female rainbow trout were sampled for growth, carcass ...

A bioinformatics-based update on microRNAs and their targets in rainbow trout (Oncorhynchus mykiss).

PubMed

Yang, Liandong; He, Shunping

2014-01-01

MicroRNAs (miRNAs) participate in various vitally biological processes via controlling target genes activity and thousands of miRNAs have been identified in many species to date, including 18,698 known animal miRNA in miRBase. However, there are only limited studies reported in rainbow trout (Oncorhynchus mykiss) especially via the computational-based approaches. In present study, we systematically investigated the miRNAs in rainbow trout using a well-developed comparative genome-based homologue search. A total of 196 potential miRNAs, belonging to 124 miRNA families, were identified, most of which were firstly reported in rainbow trout. The length of miRNAs ranged from 17 to 24 nt with an average of 20 nt while the length of their precursors varied from 47 to 152 nt with an average of 85 nt. The identified miRNAs were not evenly distributed in each miRNA family, with only one member per family for a majority, and multiple members were also identified for several families. Nucleotide U was dominant in the pre-miRNAs with a percentage of 30.04%. The rainbow trout pre-miRNAs had relatively high negative minimal folding free energy (MFE) and adjusted MFE (AMFE). Not only the mature miRNAs but their precursor sequences are conserved among the living organisms. About 2466 O. mykiss genes were predicted as potential targets for 189 miRNAs. Gene Ontology (GO) analysis showed that nearly 2093, 2107, and 2081 target genes are involved in cellular component, molecular function, and biological processes respectively. KEGG pathway enrichment analysis illuminated that these miRNAs targets might regulate 105 metabolic pathways, including those of purine metabolism, nitrogen metabolism, and oxidative phosphorylation. This study has provided an update on rainbow trout miRNAs and their targets, which represents a foundation for future studies. © 2013.

METHOXYCHLOR METABOLISM AND VITELLOGENESIS IN MALE RAINBOW TROUT LIVER SLICES

EPA Science Inventory

Induction of vitellogenin (VTG) in male fish has become an accepted biomarker to xenoestrogenicity. This study utilized the male rainbow trout liver slice model to determine the estrogenicity of parent compound, methoxychlor (MXC) and metabolites, di-hydroxy methoxychlor (HPTE) a...

THE EFFECT OF DIETARY ARSENIC ON SWIM-UP RAINBOW TROUT

EPA Science Inventory

Two 30-day toxicity tests were conducted in which swim-up rainbow trout were fed live diets of oligochaetes (Lumbriculus variegatus) containing elevated arsenic. Arsenic was incorporated into the diet by exposing oligochaetes to waterborne arsenate (test one) and waterborne ars...

Fish life histories, wildfire, and resilience - A case study of rainbow trout in the Boise River, Idaho

Treesearch

Amanda E. Rosenberger; Jason B. Dunham; Helen Neville

2012-01-01

In this short piece we address the question of how aquatic ecosystems and species can change in response to disturbances, such as those related to the influence of wildfire on stream ecosystems. Our focal species is rainbow trout (Oncorhynchus mykiss) in the Boise River, Idaho. Rainbow trout in this system have persisted in the face of widespread and often severe...

Utilization of dietary urea in rainbow trout.

PubMed

Kaushik, S J; Dabrowski, K R; Dabrowska, H; Olah, E; Luquet, P

1983-01-01

Experiments were conducted to examine the potential utilization of dietary urea by rainbow trout. A control diet and two diets supplemented with 1 and 3% of urea were fed to fish. Postprandial levels of urea and ammonia in blood plasma, and postprandial excretion of these metabolites were followed during 24 h. Apparent digestibility of urea in rainbow trout was very high (greater than 98%). Maximum values of urea levels in plasma were reached 6 h (32.3 +/- 10.2 micrograms/ml) after a meal in the control fish and respectively 6 h (83.4 +/- 18.4 micrograms/ml) and 8 h (250.3 +/- 96.1 micrograms/ml) after a meal in trout fed 1 and 3% urea diets. Peaks of urea excretion rates appeared 7-9 h after meal, coinciding with the highest circulating urea concentration. Total daily urea excretion amounted to 5.53, 10.43 and 33.80 mg urea N/100 mg N intake in trout fed the control, 1 and 3% urea diets, respectively. It is concluded that the dietary urea is readily absorbed in the digestive tract of trout but is totally excreted thus leading to no beneficial effect on nitrogen balance. This excretion of urea also takes place passively without any increase in energy demands.

Embryotoxicity of Great Lakes lake trout extracts to developing rainbow trout

USGS Publications Warehouse

Wright, Peggy J.; Tillitt, Donald E.

1999-01-01

Planar halogenated hydrocarbons (PHHs), such as polychlorinated dibenzo-p-dioxins, dibenzofurans, and biphenyls are present in aquatic systems, and are known to produce adverse effects in fish. This study investigated the embryotoxicity of PHH mixtures through the nanoinjection of environmental extracts into newly fertilized eggs from two strains of rainbow trout. Organic extracts were obtained from whole adult lake trout collected from Lake Michigan in 1988 and Lake Superior in 1994. The graded doses of the final extracts used for injection were quantified as 2,3,7,8-tetrachlorodibenzo-p-dioxin toxic-equivalents (TEQs) based on the concentrations of dioxins, furans and non-o-PCBs in each, and as equivalent amounts found in the eggs of the original lake trout (eggEQ). Total TEQs in the lake trout were 14.7 pg TEQ/g in the Lake Michigan sample and 7.3 pg TEQ/g in the Lake Superior sample. The extract of the Lake Michigan lake trout was embryotoxic to rainbow trout; LD50 values were 35 eggEQ (15–90, 95% F.L.) in the Arlee strain and 14 eggEQ (5–99, 95% F.L.) in the Erwin strain of rainbow trout. The LD50 values of the Lake Michigan extract in either of these strains of rainbow trout fall within the actual range of TCDD LD50values based on TEQs. This indicates that an additive model of toxicity is appropriate to quantify PHHs in relation to early life stage mortality in fish. Gross lesions characteristic of exposure to PHHs (i.e. yolk-sac edema, craniofacial deformities, and hemorrhaging) increased in a dose-related manner. The lowest observable adverse effect concentrations (LOAEC) for these gross lesions and cumulative mortalities suggests that current concentrations of PHHs in lake trout from Lake Michigan are above a threshold for adverse effects and these compounds may have implications on the lack of recruitment in certain Great Lakes lake trout populations.

Acute and chronic toxicity of nickel to rainbow trout (Oncorhynchus mykiss).

PubMed

Brix, Kevin V; Keithly, James; DeForest, David K; Laughlin, Jim

2004-09-01

Of the fish species tested in chronic Ni exposures, rainbow trout (Oncorhynchus mykiss) is the most sensitive. To develop additional Ni toxicity data and to investigate the toxic mode of action for Ni, we conducted acute (96-h) and chronic (85-d early life-stage) flow-through studies using rainbow trout. In addition to standard toxicological endpoints, we investigated the effects of Ni on ionoregulatory physiology (Na, Ca, and Mg). The acute median lethal concentration for Ni was 20.8 mg/L, and the 24-h gill median lethal accumulation was 666 nmol/g wet weight. No effects on plasma Ca, Mg, or Na were observed during acute exposure. In the chronic study, no significant effects on embryo survival, swim-up, hatching, or fingerling survival or growth were observed at dissolved Ni concentrations up to 466 microg/L, the highest concentration tested. This concentration is considerably higher than the only other reported chronic no-observed-effect concentration (<33 microg/L) for rainbow trout. Accumulation of Ni in trout eggs indicates the chorion is only a partial barrier with 36%, 63%, and 1% of total accumulated Ni associated with the chorion, yolk, and embryo, respectively. Whole-egg ion concentrations were reduced by Ni exposure. However, most of this reduction occurred in the chorion rather than in the embryos, and no effects on hatching success or larval survival were observed as a result. Plasma ion concentrations measured in swim-up fingerlings at the end of the chronic-exposure period were not significantly reduced by exposure to Ni. Nickel accumulated on the gill in an exponential manner but plateaued in trout plasma at waterborne Ni concentrations of 118 microg/L or greater. Consistent with previous studies, Ni did not appear to disrupt ionoregulation in acute exposures of rainbow trout. Our results also suggest that Ni is not an ionoregulatory toxicant in long-term exposures, but the lack of effects in the highest Ni treatment precludes a definitive

A new rainbow trout (Oncorhynchus mykiss) reference genome assembly

USDA-ARS?s Scientific Manuscript database

In an effort to improve the rainbow trout reference genome assembly, we have re-sequenced the doubled-haploid Swanson line using the longest available reads from the Illumina technology. Overall we generated over 510 million 260nt paired-end shotgun reads, and 1 billion 160nt mate-pair reads from f...

Simultaneous high-speed schlieren and OH chemiluminescence imaging in a hybrid rocket combustor at elevated pressures

NASA Astrophysics Data System (ADS)

Miller, Victor; Jens, Elizabeth T.; Mechentel, Flora S.; Cantwell, Brian J.; Stanford Propulsion; Space Exploration Group Team

2014-11-01

In this work, we present observations of the overall features and dynamics of flow and combustion in a slab-type hybrid rocket combustor. Tests were conducted in the recently upgraded Stanford Combustion Visualization Facility, a hybrid rocket combustor test platform capable of generating constant mass-flux flows of oxygen. High-speed (3 kHz) schlieren and OH chemiluminescence imaging were used to visualize the flow. We present imaging results for the combustion of two different fuel grains, a classic, low regression rate polymethyl methacrylate (PMMA), and a high regression rate paraffin, and all tests were conducted in gaseous oxygen. Each fuel grain was tested at multiple free-stream pressures at constant oxidizer mass flux (40 kg/m2s). The resulting image sequences suggest that aspects of the dynamics and scaling of the system depend strongly on both pressure and type of fuel.

Comprehensive analysis of lncRNAs and mRNAs in skeletal muscle of rainbow trout (Oncorhynchus mykiss) exposed to estradiol

USDA-ARS?s Scientific Manuscript database

Estradiol (E2) is a steroid hormone that negatively affects muscle growth in rainbow trout, but the mechanisms directing with this response are not fully understood. To better characterize the effects of E2 in muscle, we identified differentially regulated mRNAs and lncRNAs in juvenile rainbow trout...

Effect of turpentine oil on C-reactive protein (CRP) production in rainbow trout (Oncorhynchus mykiss).

PubMed

Liu, Youchang; Iwasaki, Tadashi; Watarai, Shinobu; Kodama, Hiroshi

2004-09-01

The effect of turpentine oil on C-reactive protein (CRP) production was studied in rainbow trout (Oncorhynchus mykiss). Serum CRP concentration was estimated by sandwich enzyme-linked immunosorbent assay using anti-rainbow trout CRP monoclonal antibody (mAb) AC4 and polyclonal antibody. Intracellular CRP was demonstrated by flow cytometry using anti-trout CRP mAb. Hepatocytes, head kidney macrophages, spleen lymphocytes and peripheral blood lymphocytes showed reaction against AC4, but RTG-2 fibroblastic line cells, derived from rainbow trout gonad did not. This is the first report on the detection of intracellular CRP in fish. CRP levels decreased significantly 1 day after intramuscular injection of turpentine oil and remained low for 14 days. Significant decreases in the expression of CRP in hepatocytes, head kidney macrophages and spleen lymphocytes after injection of turpentine oil were found. The reduction of serum CRP concentration after turpentine oil injection may be attributed to decreases in intracellular CRP synthesis.

Diel resource partitioning among juvenile Atlantic Salmon, Brown Trout, and Rainbow Trout during summer

USGS Publications Warehouse

Johnson, James H.; McKenna, James E.

2015-01-01

Interspecific partitioning of food and habitat resources has been widely studied in stream salmonids. Most studies have examined resource partitioning between two native species or between a native species and one that has been introduced. In this study we examine the diel feeding ecology and habitat use of three species of juvenile salmonids (i.e., Atlantic Salmon Salmo salar, Brown Trout Salmo trutta, and Rainbow Trout Oncorhynchus mykiss) in a tributary of Skaneateles Lake, New York. Subyearling Brown Trout and Rainbow Trout fed more heavily from the drift than the benthos, whereas subyearling Atlantic Salmon fed more from the benthos than either species of trout. Feeding activity of Atlantic Salmon and Rainbow Trout was similar, with both species increasing feeding at dusk, whereas Brown Trout had no discernable feeding peak or trough. Habitat availability was important in determining site-specific habitat use by juvenile salmonids. Habitat selection was greater during the day than at night. The intrastream, diel, intraspecific, and interspecific variation we observed in salmonid habitat use in Grout Brook illustrates the difficulty of acquiring habitat use information for widespread management applications.

Limnology of nine small lakes, Matanuska-Susitna Borough, Alaska, and the survival and growth rates of rainbow trout

USGS Publications Warehouse

Woods, P.F.

1985-01-01

The survival and growth rates of rainbow trout (Salmo gairdnieri) were concurrently measured with selected limnological characteristics in nine small (surface area < 25 sq hectometers) lakes in the Matanuska-Susitna Borough. The project goal was to develop empirical models for predicting rainbow trout growth rates from the following variables: total phosphorus concentration, chlorophyll a concentration, Secchi disc transparency, or the morphoedaphic index--a means of characterizing potential biological productivity. No suitable model could be developed from the data collected during 1982 and 1983. The lack of significant correlation was attributed in part to the wide variation in survival of rainbow trout. Winterkills, caused by severe depletion of dissolved oxygen, were suspected in four of the lakes. Varied levels of fishing pressure and competition with threespine stickleback (Gasterosteus aculeatus) also influenced survival of rainbow trout but their effects were overshadowed by winterkill. Predictive capability was also reduced because of inconsistencies in rankings generated by each of the four limnological variables chosen as indicators of potential biological productivity. A lake ranked low in productivity by one variable was commonly ranked high in productivity by another variable. The survivability of rainbow trout stocked in lakes such as these nine may be a more important indicator of potential biomass production than are indicators of lake fertility. Assessments of a lake 's susceptibility to winterkill and the degree of competition with threespine stickleback are suggested as important topics for additional research. (Author 's abstract)

Reversed rainbow with a nonlocal metamaterial

DOE Office of Scientific and Technical Information (OSTI.GOV)

Morgado, Tiago A., E-mail: tiago.morgado@co.it.pt; Marcos, João S.; Silveirinha, Mário G., E-mail: mario.silveirinha@co.it.pt

2014-12-29

One of the intriguing potentials of metamaterials is the possibility to realize a nonlocal electromagnetic reaction, such that the effective medium response at a given point is fundamentally entangled with the macroscopic field distribution at long distances. Here, it is experimentally and numerically verified that a microwave nonlocal metamaterial formed by crossed metallic wires enables a low-loss broadband anomalous material response such that the refractive index decreases with frequency. Notably, it is shown that an electromagnetic beam refracted by our metamaterial prism creates a reversed microwave rainbow.

Survival and Reproduction of Myxobolus cerebralis-Resistant Rainbow Trout Introduced to the Colorado River and Increased Resistance of Age-0 Progeny

PubMed Central

Fetherman, Eric R.; Winkelman, Dana L.; Baerwald, Melinda R.; Schisler, George J.

2014-01-01

Myxobolus cerebralis caused severe declines in rainbow trout populations across Colorado following its introduction in the 1980s. One promising approach for the recovery of Colorado’s rainbow trout populations has been the production of rainbow trout that are genetically resistant to the parasite. We introduced one of these resistant crosses, known as the GR×CRR (cross between the German Rainbow [GR] and Colorado River Rainbow [CRR] trout strains), to the upper Colorado River. The abundance, survival, and growth of the stocked GR×CRR population was examined to determine if GR×CRRs had contributed offspring to the age-0 population, and determine whether these offspring displayed increased resistance and survival characteristics compared to their wild CRR counterparts. Apparent survival of the introduced GR×CRR over the entire study period was estimated to be 0.007 (±0.001). Despite low survival of the GR×CRRs, age-0 progeny of the GR×CRR were encountered in years 2008 through 2011. Genetic assignments revealed a shift in the genetic composition of the rainbow trout fry population over time, with CRR fish comprising the entirety of the fry population in 2007, and GR-cross fish comprising nearly 80% of the fry population in 2011. A decrease in average infection severity (myxospores fish−1) was observed concurrent with the shift in the genetic composition of the rainbow trout fry population, decreasing from an average of 47,708 (±8,950) myxospores fish−1 in 2009 to 2,672 (±4,379) myxospores fish−1 in 2011. Results from this experiment suggest that the GR×CRR can survive and reproduce in rivers with a high prevalence of M. cerebralis. In addition, reduced myxospore burdens in age-0 fish indicated that stocking this cross may ultimately lead to an overall reduction in infection prevalence and severity in the salmonid populations of the upper Colorado River. PMID:24811066

Rainbow trout embryotoxicity of a complex contaminant mixture extracted from Lake Michigan lake trout

USGS Publications Warehouse

Wilson, P.J.; Tillitt, D.E.

1996-01-01

Persistent Hydrophobic contaminants such as poly chlorinated dibenzo-p-dioxins, dibenzofurans and biphenyl congeners are present in aquatic systems, and are known to produce adverse effects in fish. Reproductive failure in fish populations has been observed in aquatic systems contaminated with persistent hydrophobic compounds. In order to mimic maternal transfer of environmental contaminants to newly fertilized fish eggs, a complex environmental extract was tested for embryotoxicity in a nanoinjection bioassay with embryos of rainbow trout. The extract was obtained from whole adult lake trout collected from Lake Michigan in 1988. The tissue extraction involved blending and dehydration with sodium sulfate, column extraction, dialysis separation, reactive cleanup and, finally, high-performance gel permeation chromatography. Egg gram-equivalent doses (g tissue/g egg normalized for egg % lipid) of the final extract (0.02, 0.10, 0.20, 1.0, 2.0, 4.0, 10.0, 20.0 eggEQ) were injected into newly fertilized rainbow trout eggs using triolein as the vehicle. The extract of the lake trout was embryotoxic to rainbow trout, with an LD50 of 35 eggEQ, based on total cumulative mortality. Gross physical abnormalities characteristic of dioxin exposure, such as hemorrhaging, yolk-sac edema and craniofacial deformities, were observed and showed significant dose-related increases. Sublethal effects in the rainbow trout, such as delayed time to hatch, mild hemorrhaging and moderate yolk-sac edema, resulted from estimated total PCB exposure as low as 8.8 ng/g, and this may have significant implications on Great Lakes lake trout fry and juvenile mortality.

Genetic characterization of hybridization and introgression between anadromous rainbow trout (oncorhynchus mykiss irideus) and coastal cutthroat trout (o. clarki clarki)

USGS Publications Warehouse

Young, W.P.; Ostberg, C.O.; Keim, P.; Thorgaard, G.H.

2001-01-01

Interspecific hybridization represents a dynamic evolutionary phenomenon and major conservation problem in salmonid fishes. In this study we used amplified fragment length polymorphisms (AFLP) and mitochondrial DNA (mtDNA) markers to describe the extent and characterize the pattern of hybridization and introgression between coastal rainbow trout (Oncorhynchus mykiss irideus) and coastal cutthroat trout (O. clarki clarki). Hybrid individuals were initially identified using principle coordinate analysis of 133 polymorphic AFLP markers. Subsequent analysis using 23 diagnostic AFLP markers revealed the presence of F1, rainbow trout backcross, cutthroat trout backcross and later-generation hybrids. mtDNA analysis demonstrated equal numbers of F1 hybrids with rainbow and cutthroat trout mtDNA indicating reciprocal mating of the parental types. In contrast, rainbow and cutthroat trout backcross hybrids always exhibited the mtDNA from the recurrent parent, indicating a male hybrid mating with a pure female. This study illustrates the usefulness of the AFLP technique for generating large numbers of species diagnostic markers. The pattern of hybridization raises many questions concerning the existence and action of reproductive isolating mechanisms between these two species. Our findings are consistent with the hypothesis that introgression between anadromous populations of coastal rainbow and coastal cutthroat trout is limited by an environment-dependent reduction in hybrid fitness.

Three-Dimensional Large Screen Display Using Polymer-Dispersed Liquid-Crystal Light Valves and a Schlieren Optical System: Proposal and Basic Experiments

NASA Astrophysics Data System (ADS)

Takizawa, Kuniharu

A novel three-dimensional (3-D) projection display used with polarized eyeglasses is proposed. It consists of polymer-dispersed liquid crystal-light valves that modulate the illuminated light based on light scattering, a polarization beam splitter, and a Schlieren projection system. The features of the proposed display include a 3-D image display with a single projector, half size and half power consumption compared with a conventional 3-D projector with polarized glasses. Measured electro-optic characteristics of a polymer-dispersed liquid-crystal cell inserted between crossed polarizers suggests that the proposed display achieves small cross talk and high-extinction ratio.

Rainbow: A Framework for Analysing Computer-Mediated Pedagogical Debates

ERIC Educational Resources Information Center

Baker, Michael; Andriessen, Jerry; Lund, Kristine; van Amelsvoort, Marie; Quignard, Matthieu

2007-01-01

In this paper we present a framework for analysing when and how students engage in a specific form of interactive knowledge elaboration in CSCL environments: broadening and deepening understanding of a space of debate. The framework is termed "Rainbow," as it comprises seven principal analytical categories, to each of which a colour is assigned,…

Identification of mitochondrial genome-encoded small RNAs related to egg quality deterioration caused by post-ovulatory aging in rainbow trout

USDA-ARS?s Scientific Manuscript database

Numerous factors have been reported to affect rainbow trout egg quality, among which, post-ovulatory aging is one of the most significant causes as reared rainbow trout do not usually volitionally oviposit the ovulated eggs. Frequent examination of the stock is therefore required in order to reduce...

INDUCTION OF AN ESTROGEN-RESPONSIVE REPORTER GENE IN RAINBOW TROUT HEPATOMA CELLS (RTH 149) AT 11 OR 18 DEGREES C

EPA Science Inventory

A reporter gene assay in a cultured rainbow trout cell line was used to determine the influence of temperature on the expression of an estrogen-responsive gene. Rainbow trout hepatoma cells (RTH 149) incubated at 11 or 18 degrees C were co-transfected with an estrogen-responsive ...

Subunit vaccine candidates against Aeromonas salmonicida in rainbow trout Oncorhynchus mykiss.

PubMed

Marana, Moonika Haahr; Jørgensen, Louise von Gersdorff; Skov, Jakob; Chettri, Jiwan Kumar; Holm Mattsson, Andreas; Dalsgaard, Inger; Kania, Per Walter; Buchmann, Kurt

2017-01-01

Aeromonas salmonicida subsp. salmonicida is the etiological agent of furunculosis and a major fish health problem in salmonid aquaculture worldwide. Injection vaccination with commercial mineral oil-adjuvanted bacterin vaccines has been partly successful in preventing the disease but in Danish rainbow trout (Oncorhynchus mykiss, Walbaum) aquaculture furunculosis outbreaks still occur. In this study we tested the efficacy of experimental subunit vaccines against A. salmonicida infection in rainbow trout. We utilized in silico screening of the proteome of A. salmonicida subsp. salmonicida strain A449 and identified potential protective protein antigens that were tested by in vivo challenge trial. A total of 14 proteins were recombinantly expressed in Escherichia coli and prepared in 3 different subunit vaccine combinations to immunize 3 groups of rainbow trout by intraperitoneal (i.p.) injection. The fish were exposed to virulent A. salmonicida 7 weeks after immunization. To assess the efficacy of the subunit vaccines we evaluated the immune response in fish after immunization and challenge infection by measuring the antibody levels and monitoring the survival of fish in different groups. The survival of fish at 3 weeks after challenge infection showed that all 3 groups of fish immunized with 3 different protein combinations exhibited significantly lower mortalities (17-30%) compared to the control groups (48% and 56%). The ELISA results revealed significantly elevated antibody levels in fish against several protein antigens, which in some cases were positively correlated to the survival.

Inherent losses induced absorptive acoustic rainbow trapping with a gradient metasurface

NASA Astrophysics Data System (ADS)

Liu, Tuo; Liang, Shanjun; Chen, Fei; Zhu, Jie

2018-03-01

Acoustic rainbow trapping represents the phenomenon of strong acoustic dispersion similar to the optical "trapped rainbow," which allows spatial-spectral modulation and broadband trapping of sound. It can be realized with metamaterials that provide the required strong dispersion absent in natural materials. However, as the group velocity cannot be reduced to exactly zero before the forward mode being coupled to the backward mode, such trapping is temporary and the local sound oscillation ultimately radiates backward. Here, we propose a gradient metasurface, a rigid surface structured with gradient perforation along the wave propagation direction, in which the inherent thermal and viscous losses inside the holes are considered. We show that the gradually diminished group velocity of the structure-induced surface acoustic waves (SSAWs) supported by the metasurface becomes anomalous at the trapping position, induced by the existence of the inherent losses, which implies that the system's absorption reaches its maximum. Together with the progressively increased attenuation of the SSAWs along the gradient direction, reflectionless spatial-spectral modulation and sound enhancement are achieved in simulation. Such phenomenon, which we call as absorptive trapped rainbow, results from the balanced interplay among the local resonance inside individual holes, the mutual coupling of adjacent unit cells, and the inherent losses due to thermal conductivity and viscosity. This study deepens the understanding of the SSAWs propagation at a lossy metasurface and may contribute to the practical design of acoustic devices for high performance sensing and filtering.

Toxicity of formalin, malachite green, and the mixture to four life stages of rainbow trout

USGS Publications Warehouse

Bills, Terry D.; Advised by: Hosler, Charles F.; Cumming, Kenneth B.; Nord, Richard P.; Senff, Robert E.

1974-01-01

Formalin, malachite green, or a mixture of them are utilized in fish culture for control of external parasites of fish and control of fungus on fish and fish eggs. Very little information is available concerning the toxicity of these compounds to fish under laboratory test conditions or the differences in sensitivity to these chemicals at various life stages. This study was designed to 1) determine the toxicity of formalin, malachite green and the mixture to four life stages of rainbow trout (Salmo gairdneri) under various laboratory test conditions, 2) determine the degradation of formalin and malachite green in water, 3) determine the effect of additive toxicity, and 4) determine the differences in sensitivity of two different lots of eggs to the chemicals. The 96-hour LC50 (lethal concentration required to produce 50% mortality) for formalin against rainbow trout in soft water ranged from 580 micrograms/liter for the eyed egg stage to 134 micrograms/liter for the fingerling stage. The 96-hour LC50 for malachite green against rainbow trout in soft water ranged from 2.00 mg/L for the eyed egg stage to 0.0224 mg/L for the fingerling stage. The additive indices for formalin and malachite green when applied in combination show strictly additive toxicity as the ranges overlap zero in all tests. Deactivation indices for formalin and malachite green show essentially no change in toxicity of the solutions to rainbow trout when aged for periods of 1, 2, and 3 weeks.

BRANCHIAL ELIMINATION OF SUPERHYDROPHOBIC ORGANIC COMPOUNDS BY RAINBOW TROUT (ONCORHYNCHUS MYKISS)

EPA Science Inventory

The branchial elimination of pentachloroethane and four congeneric polychlorinated bephenyls by rainbow trout was measured using a fish respirometer-metabolism chamber and an adsorption resin column. Branchial elimination was characterized by calculating a set of apparent in vivo...

The effects of exogenous cortisol on myostatin transcription in rainbow trout, Oncorhynchus mykiss

PubMed Central

Galt, Nicholas J.; Froehlich, Jacob Michael; Remily, Ethan A.; Romero, Sinibaldo R.; Biga, Peggy R.

2014-01-01

Glucocorticoids (GCs) strongly regulate myostatin transcript levels in mammals via glucocorticoid response elements (GREs) in the myostatin promoter, and bioinformatics methods suggest that this regulatory mechanism is conserved among many vertebrates. However, the multiple myostatin genes found in some fishes may be an exception. In rainbow trout (Oncorhynchus mykiss), two genome duplication events have produced three putatively functional myostatin genes, myostatin-1a, -1b and -2a, which are ubiquitously and differentially expressed. In addition, in silico promoter analyses of the rainbow trout myostatin promoters have failed to identify putative GREs, suggesting a divergence in myostatin function. Therefore, we hypothesized that myostatin mRNA expression is not regulated by glucocorticoids in rainbow trout. In this study, both juvenile rainbow trout and primary trout myoblasts were treated with cortisol to examine the relationship between this glucocorticoid and myostatin mRNA expression. Results suggest that exogenous cortisol does not regulate myostatin-1a and -1b expression in vivo, as myostatin mRNA levels were not significantly affected by cortisol treatment in either red or white muscle tissue. In red muscle, myostatin-2a levels were significantly elevated in the cortisol treatment group relative to the control, but not the vehicle control, at both 12 h and 24 h post-injection. As such, it is unclear if cortisol was acting alone or in combination with the vehicle. Cortisol increased myostatin-1b expression in a dose-dependent manner in vitro. Further work is needed to determine if this response is the direct result of cortisol acting on the myostatin-1b promoter or through an alternative mechanism. These results suggest that regulation of myostatin by cortisol may not be as highly conserved as previously thought and support previous work that describes potential functional divergence of the multiple myostatin genes in fishes. PMID:24875565

The effects of rainbow trout (Oncorhynchus mykiss) on the use of spatial resources and behavior of rosyside dace (Clinostomus funduloides)

Treesearch

Pedro A. Rincón; Gary D. Grossman

1998-01-01

Rainbow trout (Oncorhynchus mykiss) and rosyside dace (Clinostomus fitnduloides) exhibit substantial overlap in microhabitat use in Coweeta Creek, North Carolina, USA. We conducted a replicated experiment in an artificial stream to assess the effects of both the presence of rainbow trout and dace density on: 1) microhabitat use, 2...

Design and Development of an Optical Path Difference Scan Mechanism for Fourier Transform Spectrometers using High Displacement RAINBOW Actuators

NASA Technical Reports Server (NTRS)

Wise, Stephanie A.; Hardy, Robin C.; Dausch, David E.

1997-01-01

A new piezoelectric drive mechanism has been developed for optical translation in space-based spectrometer systems. The mechanism utilizes a stack of RAINBOW high displacement piezoelectric actuators to move optical components weighing less than 250 grams through a one centimeter travel. The mechanism uses the direct motion of the piezoelectric devices, stacked such that the displacement of the individual RAINBOW actuators is additive. A prototype device has been built which utilizes 21 RAINBOWs to accomplish the necessary travel. The mechanism weighs approximately 0.6 kilograms and uses less than 2 Watts of power at a scanning frequency of 0.5 Hertz, significantly less power than that required by state-of-the-art motor systems.

Plasma proteins of rainbow trout (Oncorhynchus mykiss) isolated by binding to lipopolysaccharide from Aeromonas salmonicida.

PubMed

Hoover, G J; el-Mowafi, A; Simko, E; Kocal, T E; Ferguson, H W; Hayes, M A

1998-07-01

In an attempt to find plasma proteins that might be involved in the constitutive resistance of rainbow trout to furunculosis, a disease caused by Aeromonas salmonicida (AS), we purified serum and plasma proteins based on their calcium- and carbohydrate-dependent affinity for A. salmonicida lipopolysaccharide (LPS) coupled to an epoxy-activated synthetic matrix (Toyopearl AF Epoxy 650M). A multimeric family of high molecular weight (96 to 200-kDa) LPS-binding proteins exhibiting both calcium and mannose dependent binding was isolated. Upon reduction the multimers collapsed to subunits of approximately 16-kDa as estimated by 1D-PAGE and exhibited pI values of 5.30 and 5.75 as estimated from 2D-PAGE. Their N-terminal sequences were related to rainbow trout ladderlectin (RT-LL), a Sepharose-binding protein. Polyclonal antibodies to the LPS-purified 16-kDa subunits recognized both the reduced 16-kDa subunits and the non-reduced multimeric forms. A calcium- and N-acetylglucosamine (GlcNAc)-dependent LPS-binding multimeric protein (approximately 207-kDa) composed of 34.5-kDa subunits was purified and found to be identical to trout serum amyloid P (SAP) by N-terminal sequence (DLQDLSGKVFV). A protein of 24-kDa, in reduced and non-reduced conditions, was isolated and had N-terminal sequence identity with a known C-reactive protein (CRP) homologue, C-polysaccharide-binding protein 2 (TCBP2) of rainbow trout. A novel calcium-dependent LPS-binding protein was purified and termed rainbow trout lectin 37 (RT-L37). This protein, composed of dimers, tetramers and pentamers of 37 kDa subunits (pI 5.50-6.10) with N-terminal sequence (IQE(D/N)GHAEAPGATTVLNEILR) showed no close homology to proteins known or predicted from cDNA sequences. These findings demonstrate that rainbow trout have several blood proteins with lectin properties for the LPS of A. salmonicida; the biological functions of these proteins in resistance to furunculosis are still unknown.

Studies on the metabolism of astaxanthin in the rainbow trout (Salmo gairdneri)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Al-Khalifah, A.S.

Racemic astaxanthin was fed to rainbow trout (Salmo gairdneri) for 2, 4, and 6 weeks. The fish showed a bright pink coloration of the skin and flesh; the highest amount of astaxanthin was found in the skin of fish fed the test diet for six weeks. Lutein, 3-epilutein, and zeaxanthin were also detected in the flesh and skin; it was concluded that astaxanthin was converted to zeaxanthin in the skin. The mean vitamin A content of the liver was determined; the ratio of vitamin A/sub 1/:vitamin A/sub 2/ was approximately 1:3. Retinol and 3,4-dehydroretinol were extracted from the intestine ofmore » rainbow trout low in vitamin A, after force feeding with astaxanthin using a feeding tube. Antibiotic-treated fish had no marked difference in vitamin A content compared with a control group that received no antibiotic. This proves that astaxanthin was converted to vitamin A in fish depleted of vitamin A, that microorganisms were not involved in the conversion, and that conversion occurred in the intestine. An in vitro study using /sup 3/H 3S, 3S'-astaxanthin incubated with duodenal and ileal segments of the intestine provided HLPC and radioisotope data, which showed that rainbow trout were able to bioconvert astaxanthin to vitamin A.« less

RELATIVE BINDING AFFINITY OF ALKYLPHENOLS TO RAINBOW TROUT ESTROGEN RECEPTOR

EPA Science Inventory

RELATIVE BINDING AFFINITY OF ALKYLPHENOLS TO RAINBOW TROUT ESTROGEN RECEPTOR. T R Henry1, J S Denny2 and P K Schmieder2. USEPA, ORD, NHEERL, 1Experimental Toxicology Division and 2Mid-Continent Ecology Division, Duluth, MN, USA.
The USEPA has been mandated to screen industria...

Toxicokinetics of the neonicotinoid insecticide imidacloprid in rainbow trout (Oncorhynchus mykiss)

EPA Science Inventory

Imidacloprid (IMI) is the largest selling insecticide internationally. Little is known about the toxicokinetics of IMI in fish, however. In vivo time-course studies were conducted to study the distribution and elimination of IMI in rainbow trout. Animals confined to respiromet...

Incidence of rainbow glare after laser in situ keratomileusis flap creation with a 60 kHz femtosecond laser.

PubMed

Bamba, Sonya; Rocha, Karolinne M; Ramos-Esteban, Jerome C; Krueger, Ronald R

2009-06-01

To report the incidence of and factors associated with rainbow glare after laser in situ keratomileusis (LASIK) flap creation with a 60 kHz femtosecond laser. Department of Refractive Surgery, Cleveland Clinic Cole Eye Institute, Cleveland, Ohio, USA. Consecutive patients having LASIK by the same surgeon were questioned during postoperative examinations or by telephone about postoperative rainbow glare (radiating colors around a white light at night). Femtosecond laser (IntraLase) settings included pulse frequency 60 kHz, flap thickness 90 to 110 mum, and spot/line separation 8 mum. Raster energy was 0.8 microJ (75% of eyes) and 1.0 to 1.1 microJ (25%). Excimer laser ablation was performed with the LADAR 4000 or 6000 platform using custom or conventional treatments. Of 260 consecutive patients, 256 (98.5%) were successfully contacted. Fifteen patients (28 eyes) reported postoperative rainbow glare (5.8%), described as 4 to 12 bands of color around a white light, with 6 bands most common. The symptom did not correlate with refractive error, age, or sex but was more frequent at 1.0 microJ or 1.1 microJ raster energy (11.6%) than at 0.8 microJ (4.1%). The incidence followed a bimodal distribution, with the first grouping due to inadequate alignment and higher energy just after laser installation and the second just before a later maintenance service call. Rainbow glare is a mild optical side effect of femtosecond LASIK. In this study, higher raster energy levels and length of time between service calls were associated with the occurrence of rainbow glare.

Trace Metal Levels in Rainbow Trout (Oncorhynchus mykiss) Cultured in Net Cages in a Reservoir and Evaluation of Human Health Risks from Consumption.

PubMed

Varol, Memet; Kaya, Gülderen Kurt; Alp, Sumru Anık; Sünbül, Muhammet Raşit

2017-09-19

Although fish consumption has positive health effects, metals accumulated in fish can cause human health risks. In this study, the levels of ten metals in rainbow trout (Oncorhynchus mykiss) farmed in the Keban Dam Reservoir, which has the biggest rainbow trout production capacity in Turkey, were determined and compared with the maximum permissible levels (MPLs). Also, human health risks associated with rainbow trout consumption were assessed. The metal concentrations in rainbow trout were found below the MPLs. The estimated daily intake of each metal was much lower than the respective tolerable daily intake. The target hazard quotient (THQ) for individual metal and total THQ for combined metals did not exceed 1, indicating no health risk for consumers. The cancer risk (CR) value for inorganic arsenic was within the acceptable lifetime risk range of 10 -6 and 10 -4 . For carcinogenic and non-carcinogenic effects, the maximum allowable fish consumption rates were high enough to ensure the human health. According to these results, the consumption of rainbow trout farmed in the Keban Dam Reservoir does not pose a risk on human health.

Quantitative evaluation of macrophage aggregates in brook trout Salvelinus fontinalis and rainbow trout Oncorhynchus mykiss

USGS Publications Warehouse

Schwindt, Adam R.; Truelove, Nathan; Schreck, Carl B.; Fournie, John W.; Landers, Dixon H.; Kent, Michael L.

2006-01-01

Macrophage aggregates (MAs) occur in various organs of fishes, especially the kidney, liver and spleen, and contain melanin, ceroid/lipofuscin and hemosiderin pigments. They have been used as indicators of a number of natural and anthropogenic stressors. Macrophage aggregates occur in salmonids but are poorly organized, irregularly shaped, and are generally smaller than those in derived teleosts. These features complicate quantification, and thus these fishes have seldom been used in studies correlating MAs with environmental stressors. To alleviate these complications, we developed color filtering algorithms for use with the software package ImagePro Plus® (Media Cybernetics) that select and quantify pigmented area (i.e. colors ranging from gold to brown to black) in tissue sections. Image analysis results compared well with subjective scoring when tested on brook trout Salvelinus fontinalis and rainbow trout Oncorhynchus mykiss captured from high-elevation lakes or hatcheries. Macrophage aggregate pigments correlated positively with age and negatively with condition factor. Within individual fish, pigmentation correlated positively among organs, suggesting that the kidney, liver or spleen are suitable indicator organs. In age-matched fishes, MA pigments were not different between hatcheries and lakes in the organs examined. Between lakes, differences in pigments were observed in the kidney and spleen, but were not explained by age, condition factor, sex or maturation state. Our results indicate that quantification of the area occupied by MA pigments is an efficient and accurate means of evaluating MAs in salmonid organs and that organ pigmentation correlates with age and condition factor, as seen in studies with more derived fishes. 

Casimir effect in the rainbow Einstein's universe

NASA Astrophysics Data System (ADS)

Bezerra, V. B.; Mota, H. F.; Muniz, C. R.

2017-10-01

In the present paper we investigate the effects caused by the modification of the dispersion relation obtained by solving the Klein-Gordon equation in the closed Einstein's universe in the context of rainbow's gravity models. Thus, we analyse how the quantum vacuum fluctuations of the scalar field are modified when compared with the results obtained in the usual General Relativity scenario. The regularization, and consequently the renormalization, of the vacuum energy is performed adopting the Epstein-Hurwitz and Riemann's zeta functions.

Dietary effects of Spirulina platensis on hematological and serum biochemical parameters of rainbow trout (Oncorhynchus mykiss).

PubMed

Yeganeh, Sakineh; Teimouri, Mahdi; Amirkolaie, Abdolsamad Keramat

2015-08-01

This study evaluated the effects of diets containing 0, 2.5, 5, 7.5 and 10% of Spirulina platensis on hematological and serum biochemical parameters of rainbow trout (Oncorhynchus mykiss). Fish (n=180; 101±8 g) were randomly divided into fifteen 300 L fiberglass tanks in triplicates for a period of ten weeks. The RBC, WBC, hemoglobin, total protein and albumin levels increased significantly in the groups supplemented with S. platensis. Dietary inclusion of S. platensis had no significant effects on hematocrit, cholesterol, triglyceride and lactate of the blood. HDL-cholesterol was larger in rainbow trout fed 10% S. platensis in comparison with the other diets, whereas LDL-cholesterol significantly decreased with increasing of S. platensis inclusion. Cortisol and glucose significantly decreased with increasing of S. platensis inclusion. The present results demonstrate that inclusion of 10% S. platensis can be introduced as an immunostimulant in rainbow trout diets. Copyright © 2015 Elsevier Ltd. All rights reserved.

Ultrastructural effects of pharmaceuticals (carbamazepine, clofibric acid, metoprolol, diclofenac) in rainbow trout (Oncorhynchus mykiss) and common carp (Cyprinus carpio).

PubMed

Triebskorn, R; Casper, H; Scheil, V; Schwaiger, J

2007-02-01

In order to assess potential effects of human pharmaceuticals in aquatic wildlife, laboratory experiments were conducted with carbamazepine, clofibric acid, metoprolol, and diclofenac using fish as test organisms. For each substance, at least one environmentally relevant concentration was tested. In liver, kidney, and gills of trout and carp exposed to carbamazepine, clofibric acid, and metoprolol, ultrastructural effects were qualitatively described and semi-quantitatively assessed. The obtained assessment values were compared with previously published data for diclofenac-induced effects in rainbow trout tissues. Quantitative analyses of protein accumulated in kidneys of diclofenac-exposed trout corroborated previously published data which indicated that diclofenac induced a severe glomerulonephritis resulting in a hyaline droplet degeneration of proximal kidney tubules. The investigations provided information on the general health status of the pharmaceutical-exposed fish, and allowed a differential diagnosis of harmful effects caused by these human pharmaceuticals in non-target species. For the different cytological effects observed, lowest observed effect concentration (LOECs) for at least three of the test substances (diclofenac, carbamazepine, metoprolol) were in the range of environmentally relevant concentrations (1 microg/L).

Effect of catch-and-release angling on growth and survival of rainbow trout, Oncorhynchus mykiss

USGS Publications Warehouse

Pope, K.L.; Wilde, G.R.; Knabe, D.W.

2007-01-01

Catch-and-release angling is popular in many parts of the world and plays an increasingly important role in fish conservation efforts. Although survival rates associated with catch-and-release angling are well documented for many species, sublethal effects have been less studied. An experiment was conducted to directly assess the effects of catch-and-release angling on growth and survival of rainbow trout, Oncorhynchus mykiss (Walbaum). Catch-and-release events were simulated in laboratory tanks maintained at 15-16 ??C with hooks manually placed in pre-designated locations in the mouths of the fish. There were no differences in standard length (P = 0.59) or wet weight (P = 0.81) gained between caught and uncaught fish over a 1-month angling and recovery period. Survival was 96.99 ?? 0.06% for rainbow trout caught and released, and did not vary with number (one, two or four) of captures. Thus, catch-and-release angling appears to have little effect on growth and mortality of rainbow trout hooked in the mouth. ?? 2007 The Authors. Journal compilation 2007 Blackwell Publishing Ltd.

Diel resource partitioning among juvenile Atlantic Salmon, Brown Trout, and Rainbow Trout during summer

USGS Publications Warehouse

Johnson, James H.; McKenna, James E.

2015-01-01

Interspecific partitioning of food and habitat resources has been widely studied in stream salmonids. Most studies have examined resource partitioning between two native species or between a native species and one that has been introduced. In this study we examine the diel feeding ecology and habitat use of three species of juvenile salmonids (i.e., Atlantic Salmon Salmo salar, Brown Trout Salmo trutta, and Rainbow Trout Oncorhynchus mykiss) in a tributary of Skaneateles Lake, New York. Subyearling Brown Trout and Rainbow Trout fed more heavily from the drift than the benthos, whereas subyearling Atlantic Salmon fed more from the benthos than either species of trout. Feeding activity of Atlantic Salmon and Rainbow Trout was similar, with both species increasing feeding at dusk, whereas Brown Trout had no discernable feeding peak or trough. Habitat availability was important in determining site-specific habitat use by juvenile salmonids. Habitat selection was greater during the day than at night. The intrastream, diel, intraspecific, and interspecific variation we observed in salmonid habitat use in Grout Brook illustrates the difficulty of acquiring habitat use information for widespread management applications.

The forward rainbow scattering of low energy protons by a graphene sheet

NASA Astrophysics Data System (ADS)

Ćosić, M.; Petrović, S.; Nešković, N.

2018-05-01

This article studies the rainbow scattering of 5-keV protons by the single sheet of free-standing graphene and its possible use as a tool for investigation of the ion-graphene interaction. The proton-graphene interaction potential was constructed by using the Doyle-Turner, ZBL, and Molière proton-carbon interaction potentials. The thermal motion of carbon atoms was included by averaging the potentials according to the Debye model. Proton trajectories were obtained by numerical solution of the corresponding Newton equations of motion. They were used to obtain the mapping of the proton initial positions to their scattering angles. Morphological properties of the introduced mapping including its multiplicity and the rainbow singularities were used to explain important features of the obtained angular distributions of transmitted protons.

An obscure disease of rainbow trout

USGS Publications Warehouse

Rucker, R.R.; Yasutake, W.T.; Wedemeyer, G.

1970-01-01

An annul mortality among Rainbow Trout (Salmo gairdneri) has plagued the Shelton Hatchery of the Washington State Department of Game for the last several years. No infectious agent could be isolated from the moribund fish, but histopathologica1 changes in the liver of 1-month-old fish suggested the presence of a toxic substance. Scoliosis in 3-month-old fish suggested a possible deficiency in vitamin C. With this background in mind, we designed studies to determine the nature and source of possible toxicants and the role of vitamin C deficiency in the etiology of this disease.

Rainbow smelt (Osmerus mordax) as predators on young bloaters (Coregonus hoyi) in Lake Michigan

USGS Publications Warehouse

Stedman, Ralph M.; Argyle, Ray L.

1985-01-01

Examination of the stomach contents of rainbow smelt caught in bottom trawls in Lake Michigan during mid October, 1982, revealed that of 267 rainbow smelt (Osmerus mordax) with food in their stomachs, 56% (150) had eaten young-of-the-year fish. Nearly 15% of the prey fish consumed were bloaters (Coregonus hoyi), 21 % were alewives(Alosa pseudoharengus), and the rest could not be positively identified but were probably bloaters and alewives. Although smelt predation did not appear to have affected bloater abundance, continued increases in smelt abundance and declines in alewife populations could lead to increased predator pressure on bloater stocks, which are in the process of rebuilding.

Black hole complementarity with the generalized uncertainty principle in Gravity's Rainbow

NASA Astrophysics Data System (ADS)

Gim, Yongwan; Um, Hwajin; Kim, Wontae

2018-02-01

When gravitation is combined with quantum theory, the Heisenberg uncertainty principle could be extended to the generalized uncertainty principle accompanying a minimal length. To see how the generalized uncertainty principle works in the context of black hole complementarity, we calculate the required energy to duplicate information for the Schwarzschild black hole. It shows that the duplication of information is not allowed and black hole complementarity is still valid even assuming the generalized uncertainty principle. On the other hand, the generalized uncertainty principle with the minimal length could lead to a modification of the conventional dispersion relation in light of Gravity's Rainbow, where the minimal length is also invariant as well as the speed of light. Revisiting the gedanken experiment, we show that the no-cloning theorem for black hole complementarity can be made valid in the regime of Gravity's Rainbow on a certain combination of parameters.

Simultaneous measurement of monocomponent droplet temperature/refractive index, size and evaporation rate with phase rainbow refractometry

NASA Astrophysics Data System (ADS)

Wu, Yingchun; Crua, Cyril; Li, Haipeng; Saengkaew, Sawitree; Mädler, Lutz; Wu, Xuecheng; Gréhan, Gérard

2018-07-01

The accurate measurements of droplet temperature, size and evaporation rate are of great importance to characterize the heat and mass transfer during evaporation/condensation processes. The nanoscale size change of a micron-sized droplet exactly describes its transient mass transfer, but is difficult to measure because it is smaller than the resolutions of current size measurement techniques. The Phase Rainbow Refractometry (PRR) technique is developed and applied to measure droplet temperature, size and transient size changes and thereafter evaporation rate simultaneously. The measurement principle of PRR is theoretically derived, and it reveals that the phase shift of the time-resolved ripple structures linearly depends on, and can directly yield, nano-scale size changes of droplets. The PRR technique is first verified through the simulation of rainbows of droplets with changing size, and results show that PRR can precisely measure droplet refractive index, absolute size, as well as size change with absolute and relative errors within several nanometers and 0.6%, respectively, and thus PRR permits accurate measurements of transient droplet evaporation rates. The evaporations of flowing single n-nonane droplet and mono-dispersed n-heptane droplet stream are investigated by two PRR systems with a high speed linear CCD and a low speed array CCD, respectively. Their transient evaporation rates are experimentally determined and quantitatively agree well with the theoretical values predicted by classical Maxwell and Stefan-Fuchs models. With the demonstration of evaporation rate measurement of monocomponent droplet in this work, PRR is an ideal tool for measurements of transient droplet evaporation/condensation processes, and can be extended to multicomponent droplets in a wide range of industrially-relevant applications.

Background oriented schlieren measurement of the refractive index field of air induced by a hot, cylindrical measurement object.

PubMed

Beermann, Rüdiger; Quentin, Lorenz; Pösch, Andreas; Reithmeier, Eduard; Kästner, Markus

2017-05-10

To optically capture the topography of a hot measurement object with high precision, the light deflection by the inhomogeneous refractive index field-induced by the heat transfer from the measurement object to the ambient medium-has to be considered. We used the 2D background oriented schlieren method with illuminated wavelet background, an optical flow algorithm, and Ciddor's equation to quantify the refractive index field located directly above a red-glowing, hot measurement object. A heat transfer simulation has been implemented to verify the magnitude and the shape of the measured refractive index field. Provided that no forced external flow is disturbing the shape of the convective flow originating from the hot object, a laminar flow can be observed directly above the object, resulting in a sharply bounded, inhomogeneous refractive index field.

Survival and reproduction of myxobolus cerebralis-resistant Rainbow Trout introduced to the colorado river and increased resistance of age-0 progeny

USGS Publications Warehouse

Winkelman, Dana L.; Fetherman, Eric R.; Baerwald, Melinda R.; Schisler, George J.

2014-01-01

Myxobolus cerebralis caused severe declines in rainbow trout populations across Colorado following its introduction in the 1980s. One promising approach for the recovery of Colorado’s rainbow trout populations has been the production of rainbow trout that are genetically resistant to the parasite. We introduced one of these resistant crosses, known as the GR×CRR (cross between the German Rainbow [GR] and Colorado River Rainbow [CRR] trout strains), to the upper Colorado River. The abundance, survival, and growth of the stocked GR×CRR population was examined to determine if GR×CRRs had contributed offspring to the age-0 population, and determine whether these offspring displayed increased resistance and survival characteristics compared to their wild CRR counterparts. Apparent survival of the introduced GR×CRR over the entire study period was estimated to be 0.007 (±0.001). Despite low survival of the GR×CRRs, age-0 progeny of the GR×CRR were encountered in years 2008 through 2011. Genetic assignments revealed a shift in the genetic composition of the rainbow trout fry population over time, with CRR fish comprising the entirety of the fry population in 2007, and GR-cross fish comprising nearly 80% of the fry population in 2011. A decrease in average infection severity (myxospores fish−1) was observed concurrent with the shift in the genetic composition of the rainbow trout fry population, decreasing from an average of 47,708 (±8,950) myxospores fish−1 in 2009 to 2,672 (±4,379) myxospores fish−1 in 2011. Results from this experiment suggest that the GR×CRR can survive and reproduce in rivers with a high prevalence of M. cerebralis. In addition, reduced myxospore burdens in age-0 fish indicated that stocking this cross may ultimately lead to an overall reduction in infection prevalence and severity in the salmonid populations of the upper Colorado River.

Annual changes in plasma levels of cortisol and sex steroid hormones in male rainbow trout, Oncorhynchus mykiss

NASA Astrophysics Data System (ADS)

Hou, Ya-Yi; Han, Xiao-Dong; Suzuki, Yuzuru

2001-09-01

The profiles of cortisol, testosterone, 11-ketotestosterone and 17α, 20β-dihydroxy-4-pregnene-3-one in male rainbow trout reared under constant water temperature and natural photoperiod were determined by radioimmunoassay. Gonads of male rainbow trout reached maturity when the fish were two years old. Changes in the plasma levels of both sex steroid hormones and cortisol were closely related to the GSI. Plasma levels of testosterone, 11-ketotestosterone and 17α; 20β-dihydroxy 4-pregnene-3-one showed a clear peak in the annual breeding season, when the GSI reached their maxima. Plasma cortisol levels also showed clearly seasonal changes in both two- and three-year-old fish. The results suggest that the elevated plasma levels of cortisol may not just be due to stresses during the breeding season but have certain physiological functions in the reproduction of rainbow trout.

Rainbow trout movement behavior and habitat occupancy are influenced by sex and Pacific salmon presence in an Alaska river system

USGS Publications Warehouse

Fraley, Kevin M.; Falke, Jeffrey A.; McPhee, Megan V.; Prakash, Anupma

2018-01-01

We used spatially continuous field-measured and remotely-sensed aquatic habitat characteristics paired with weekly ground-based telemetry tracking and snorkel surveys to describe movements and habitat occupancy of adult rainbow trout (N = 82) in a runoff-fed, salmon-influenced southcentral Alaska river system. We found that during the ice-free feeding season (June through September) rainbow trout occurrence was associated more with fine-scale (channel unit) characteristics relative to coarse-scale (stream reach) variables. The presence of Pacific salmon (which provide an important seasonal food subsidy), and habitat size were particularly useful predictors. Weekly movement distance differed between pre- and post- spawning salmon arrival, but did not vary by sex. Habitat quality, season, and the arrival of spawning salmon influenced the likelihood of rainbow trout movement, and fish moved farther to seek out higher quality habitats. Because rainbow trout respond to habitat factors at multiple scales and seek out salmon-derived subsidies, it will be important to take a multiscale approach in protecting trout and salmon populations and managing the associated fisheries.

Determination of digestible and metabolizable energy of fishmeal and soybean meal in rainbow trout with two different sizes (Oncorhynchus mykiss).

PubMed

Allameh, Sayed Kamaleddin; Soofiani, Nasrollah Mahboobi; Pourreza, Javad

2007-10-15

The present research carried out to measure digestible (DE) and Metabolizable Energy (ME) for fishmeal and soybean meal in rainbow trout with two different sizes (120 and 220 g mean body weights). DE and ME are evaluation systems for feedstuffs and also, necessary for diet formulation. The fishes were maintained in metabolic chamber with single ingredient assay of feeding and chromic oxide (Cr2O3) was used as an external marker using total fecal collection method. Gross energy and chromic oxide values measured in feces, fishmeal and soybean meal. The results indicated that DE offishmeal was 3700 and 3591 kcal kg(-1) in 120 and 220 g body weight rainbow trout, respectively. Soybean meal had 3004 and 2889 kcal kg(-1) respectively. Calculated ME from DE were 3204 and 3110 kcal kg(-1) for fishmeal and 2601 and 2502 kcal kg(-1) for soybean meal in 120 and 220 g rainbow trout, respectively. The results showed that rainbow trout can utilize fishmeal more efficiently than soybean meal.

Teaching the Absorption of Light Colours Using an Artificial Rainbow

ERIC Educational Resources Information Center

Yurumezoglu, Kemal; Isik, Hakan; Arikan, Gizem; Kabay, Gozde

2015-01-01

This paper presents an experimental activity based on the absorption of light colours by pigments. The activity is constructed using a stepwise design and offers an opportunity for students and teachers to compare and generalize the interactions between light and pigment colours. The light colours composing an artificial rainbow produced in the…

Invasion and initial replication of ultraviolet irradiated waterborne infective stages of Myxobolus cerebralis results in immunity to whirling disease in rainbow trout.

PubMed

Hedrick, Ronald P; McDowell, Terry S; Adkison, Mark A; Myklebust, Karin A; Mardones, Fernando O; Petri, Brian

2012-06-01

Myxobolus cerebralis is a microscopic metazoan parasite (Phylum Myxozoa: Myxosporea) associated with salmonid whirling disease. There are currently no vaccines to minimise the serious negative economical and ecological impacts of whirling disease among populations of salmonid fish worldwide. UV irradiation has been shown to effectively inactivate the waterborne infective stages or triactinomyxons of M. cerbralis in experimental and hatchery settings but the mechanisms by which the parasite is compromised are unknown. Treatments of triactinomyxons with UV irradiation at doses from 10 to 80 mJ/cm(2) either prevented (20-80 mJ/cm(2)) or significantly inhibited (10 mJ/cm(2)) completion of the parasite life cycle in experimentally exposed juvenile rainbow trout (Oncorhynchus mykiss). However, even the highest doses of UV irradiation examined (80 mJ/cm(2)) did not prevent key steps in the initiation of parasite infection, including attachment and penetration of the epidermis of juvenile rainbow trout as demonstrated by scanning electron and light microscopy. Furthermore, replication of UV-treated parasites within the first 24h following invasion of the caudal fin was suggested by the detection of concentrations of parasite DNA by quantitative PCR comparable to that among fish exposed to an equal concentration of untreated triactinomyxons. Subsequent development of parasites treated with an 80 mJ/cm(2) dose of UV irradiation however, was impaired as demonstrated by the decline and then lack of detection of parasite DNA; a trend beginning at 10 days and continuing thereafter until the end of the study at 46 days post parasite exposure. Treatments of triactinomyxons with a lower dose of UV irradiation (20 mJ/cm(2)) resulted in a more prolonged survival with parasite DNA detected, although at very low concentrations, in fish up to 49 days post parasite exposure. The successful invasion but only short-term survival of parasites treated with UV in rainbow trout resulted in a

DEVELOPMENT OF AN ENVIRONMENTAL ESTROGEN SCREEN USING TRANSIENTLY TRANSFECTED RAINBOW TROUT CELL LINES

EPA Science Inventory

Rainbow troutp hepatoma (RTH-149) and gonad cells (RTG-2) were used to develop a screening protocol for estrogen disrupting chemicals. Transfection of an estrogen-responsive luciferase reporter plasmid into...

Family differences related to carbohydrate utilization in rainbow trout Oncorhynchus mykiss

USDA-ARS?s Scientific Manuscript database

Rainbow trout utilize protein as an energy source much more efficiently than carbohydrates. Alternative diets utilizing plant material typically contain higher levels of carbohydrate than standard fish meal diets. The goal of this study was to determine if there are molecular and physiological diffe...

Metals-contaminated benthic invertebrates in the Clark Fork River, Montana: Effects on age-0 brown trout and rainbow trout

USGS Publications Warehouse

Woodward, Daniel F.; Farag, Aïda M.; Bergman, Harold L.; Delonay, Aaron J.; Little, Edward E.; Smiths, Charlie E.; Barrows, Frederic T.

1995-01-01

Benthic organisms in the upper Clark Fork River have recently been implicated as a dietary source of metals that may be a chronic problem for young-of-the-year rainbow trout (Oncorhynchus mykiss). In this present study, early life stage brown trout (Salmo trutta) and rainbow trout were exposed for 88 d to simulated Clark Fork River water and a diet of benthic invertebrates collected from the river. These exposures resulted in reduced growth and elevated levels of metals in the whole body of both species. Concentrations of As, Cd, Cu, and Pb increased in whole brown trout; in rainbow trout, As and Cd increased in whole fish, and As also increased in liver. Brown trout on the metals-contaminated diets exhibited constipation, gut impaction, increased cell membrane damage (lipid peroxidation), decreased digestive enzyme production (zymogen), and a sloughing of intestinal mucosal epithelial cells. Rainbow trout fed the contaminated diets exhibited constipation and reduced feeding activity. We believe that the reduced standing crop of trout in the Clark Fork River results partly from chronic effects of metals contamination in benthic invertebrates that are important as food for young-of-the-year fish.

Effect of capture stress on plasma enzyme activities in rainbow trout (Salmo gairdneri)

USGS Publications Warehouse

Bouck, G.R.; Cairns, M. A.; Christian, A. R.

1978-01-01

Four capture methods were used to collect domesticated rainbow trout (Salmo gairdneri): angling, electroshocking, seining, and direct netting (control). Blood was sampled rapidly upon capture, usually within 2 min. No significant differences were noted within the time frame of the experiment between the four capture groups for plasma protein concentration, lactate dehydrogenase activity, or leucine aminonaphthylamidase activity. Creatine phosphokinase activity was elevated among electroshocked fish. Acid phosphatase activity was too low for accurate measurement. Hematocrits were significantly elevated by capture struggles. These results indicate that these capture methods do not preclude the use of plasma enzyme levels for investigating the health of wild fish. Key words: plasma enzyme, capture stress, physiology, plasma protein, rainbow trout, lactate dehydrogenase, leucine aminonaphthylamidase, creatine phosphokinase

Physiological response to hooking stress in hatchery and wild rainbow trout (Salmo gairdneri)

USGS Publications Warehouse

Wydoski, R.S.; Wedemeyer, G.A.; Nelson, N. C.

1976-01-01

This study evaluated the physiological response of rainbow trout to hooking stress after being played under standardized conditions (0–5 min) and estimated the time needed for recovery (to 72 h). Plasma osmolality and chloride measurements were used to evaluate osmoregulatory disturbances and gill ion-exchange function, and plasma glucose was used as an index of the generalized nonspecific physiological stress response. Hooking stress caused more severe blood chemistry differences in hatchery fish than in wild trout. Also, hooking stress imposed a greater stress on larger than on smaller hatchery rainbow trout. Higher water temperatures aggravated the delayed hyperglycemia and hyperchloremia in both hatchery and wild trout but only about 3 days were needed for recovery at 4, 10, or 20 C.

Biotic and abiotic factors related to rainbow smelt recruitment in the Wisconsin waters of Lake Superior, 1978-1997

USGS Publications Warehouse

Hoff, Michael H.

2004-01-01

Lake Superior rainbow smelt (Osmerus mordax) recruitment to 12-13 months of age in the Wisconsin waters of Lake Superior varied by a factor of 9.3 during 1978-1997. Management agencies have sought models that accurately predict recruitment, but no satisfactory models had previously been developed. In this study, modeling was conducted to determine which factors best explained recruitment variability. The Ricker stock-recruitment model derived from only the paired stock and recruit data accounted for 63% of the variability in recruitment data. The functional relationship that accounted for the greatest amount of recruitment variation (81%) included rainbow smelt stock size, May rainfall, and bloater (Coregonus hoyi) biomass. Model results were interpreted to mean that recruitment was affected negatively by increased river flows from increased rainfall, and affected positively by the biomass of bloater, and those results were interpreted to mean that bloater mediated the effects of lake trout predation on rainbow smelt recruits. Model results were also interpreted to mean that stock size caused compensatory, density-dependent mortality on rainbow smelt recruits. Correlations observed here may be of value to managers seeking approaches to either enhance or control populations of this species, which is not indigenous to the Great Lakes.

Determination of metabolic stability using cryopreserved hepatocytes from rainbow trout (Oncorhynchus mykiss)

EPA Science Inventory

Standard protocols for isolating, cryopreserving, and thawing rainbow trout hepatocytes are described, along with procedures for using fresh or cryopreserved hepatocytes to assess chemical metabolic stability in fish by means of a substrate depletion approach. Variations on thes...

Rainbow-Like Spectra with a CD: An Active-Learning Exercise

ERIC Educational Resources Information Center

Planinsic, G.

2008-01-01

Rainbow-like spectra, produced by reflexive diffraction of white light on a CD, offer a spectacular visual effect as well as an excellent classroom opportunity for students to learn how physics works. In this paper we show that building a coherent qualitative explanation can be a challenging task that requires students to combine gained knowledge…

RAD sequencing yields a high success rate for westslope cutthroat and rainbow trout species-diagnostic SNP assays

USGS Publications Warehouse

Stephen J. Amish,; Paul A. Hohenlohe,; Sally Painter,; Robb F. Leary,; Muhlfeld, Clint C.; Fred W. Allendorf,; Luikart, Gordon

2012-01-01

Hybridization with introduced rainbow trout threatens most native westslope cutthroat trout populations. Understanding the genetic effects of hybridization and introgression requires a large set of high-throughput, diagnostic genetic markers to inform conservation and management. Recently, we identified several thousand candidate single-nucleotide polymorphism (SNP) markers based on RAD sequencing of 11 westslope cutthroat trout and 13 rainbow trout individuals. Here, we used flanking sequence for 56 of these candidate SNP markers to design high-throughput genotyping assays. We validated the assays on a total of 92 individuals from 22 populations and seven hatchery strains. Forty-six assays (82%) amplified consistently and allowed easy identification of westslope cutthroat and rainbow trout alleles as well as heterozygote controls. The 46 SNPs will provide high power for early detection of population admixture and improved identification of hybrid and nonhybridized individuals. This technique shows promise as a very low-cost, reliable and relatively rapid method for developing and testing SNP markers for nonmodel organisms with limited genomic resources.

Mechanisms of fenthion activation in rainbow trout (Oncorhynchus mykiss) acclimated to hypersaline environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lavado, Ramon; Rimoldi, John M.; Schlenk, Daniel

2009-03-01

Previous studies in rainbow trout have shown that acclimation to hypersaline environments enhances the toxicity to thioether organophosphate and carbamate pesticides. In order to determine the role of biotransformation in this process, the metabolism of the thioether organophosphate biocide, fenthion was evaluated in microsomes from gills, liver and olfactory tissues in rainbow trout (Oncorhynchus mykiss) acclimated to freshwater and 17 per mille salinity. Hypersalinity acclimation increased the formation of fenoxon and fenoxon sulfoxide from fenthion in liver microsomes from rainbow trout, but not in gills or in olfactory tissues. NADPH-dependent and independent hydrolysis was observed in all tissues, but onlymore » NADPH-dependent fenthion cleavage was differentially modulated by hypersalinity in liver (inhibited) and gills (induced). Enantiomers of fenthion sulfoxide (65% and 35% R- and S-fenthion sulfoxide, respectively) were formed in liver and gills. The predominant pathway of fenthion activation in freshwater appears to be initiated through initial formation of fenoxon which may be subsequently converted to the most toxic metabolite fenoxon R-sulfoxide. However, in hypersaline conditions both fenoxon and fenthion sulfoxide formation may precede fenoxon sulfoxide formation. Stereochemical evaluation of sulfoxide formation, cytochrome P450 inhibition studies with ketoconazole and immunoblots indicated that CYP3A27 was primarily involved in the enhancement of fenthion activation in hypersaline-acclimated fish with limited contribution of FMO to initial sulfoxidation.« less

Hepatic glucose metabolic responses to digestible dietary carbohydrates in two isogenic lines of rainbow trout.

PubMed

Song, Xuerong; Marandel, Lucie; Dupont-Nivet, Mathilde; Quillet, Edwige; Geurden, Inge; Panserat, Stephane

2018-06-05

Rainbow trout ( Oncorhynchus mykiss ) was recognized as a typical 'glucose-intolerant' fish and poor dietary carbohydrate user. Our first objective was to test the effect of dietary carbohydrates themselves (without modification of dietary protein intake) on hepatic glucose gene expression (taking into account the paralogs). The second aim was to research if two isogenic trout lines had different responses to carbohydrate intake, showing one with a better use dietary carbohydrates. Thus, we used two isogenic lines of rainbow trout (named A32h and AB1h) fed with either a high carbohydrate diet or a low carbohydrate diet for 12 weeks. We analysed the zootechnical parameters, the plasma metabolites, the hepatic glucose metabolism at the molecular level and the hormonal-nutrient sensing pathway. Globally, dietary carbohydrate intake was associated with hyperglycaemia and down regulation of the energy sensor Ampk, but also with atypical regulation of glycolysis and gluconeogenesis in the liver. Indeed, the first steps of glycolysis and gluconeogenesis catalysed by the glucokinase and the phospenolpyruvate carboxykinase are regulated at the molecular level by dietary carbohydrates as expected (i.e. induction of the glycolytic gck and repression of the gluconeogenic pck ); by contrast, and surprisingly, for two other key glycolytic enzymes (phosphofructokinase enzyme - pfk l and pyruvate kinase - p k ) some of the paralogs ( pfklb and pklr ) are inhibited by carbohydrates whereas some of the genes coding gluconeogenic enzymes (the glucose-6-phosphatase enzyme g6pcb1b and g6pcb2a gene and the fructose1-6 biphosphatase paralog fbp1a ) are induced. On the other hand, some differences for the zootechnical parameters and metabolic genes were also found between the two isogenic lines, confirming the existence of genetic polymorphisms for nutritional regulation of intermediary metabolism in rainbow trout. In conclusion, our study determines some new and unexpected molecular

Effects of turbidity on predation vulnerability of juvenile humpback chub to rainbow and brown trout

USGS Publications Warehouse

Ward, David L.; Morton-Starner, Rylan; Vaage, Benjamin M.

2016-01-01

Predation on juvenile native fish by introduced rainbow trout Oncorhynchus mykiss and brown trout Salmo trutta is considered a significant threat to the persistence of endangered humpback chub Gila cypha in the Colorado River in Grand Canyon. Diet studies of rainbow and brown trout in Glen and Grand canyons indicate that these species eat native fish, but impacts are difficult to assess because predation vulnerability is highly variable depending on the physical conditions under which the predation interactions take place. We conducted laboratory experiments to evaluate how short-term predation vulnerability of juvenile humpback chub changes in response to changes in turbidity. In overnight laboratory trials, we exposed hatchery-reared juvenile humpback chub and bonytail Gila elegans (a surrogate for humpback chub) to adult rainbow and brown trout at turbidities ranging from 0 to 1,000 formazin nephlometric units. We found that turbidity as low as 25 formazin nephlometric units significantly reduced predation vulnerability of bonytail to rainbow trout and led to a 36% mean increase in survival (24–60%, 95% CI) compared to trials conducted in clear water. Predation vulnerability of bonytail to brown trout at 25 formazin nephlometric units also decreased with increasing turbidity and resulted in a 25% increase in survival on average (17–32%, 95% CI). Understanding the effects of predation by trout on endangered humpback chub is important when evaluating management options aimed at preservation of native fishes in Grand Canyon National Park. This research suggests that relatively small changes in turbidity may be sufficient to alter predation dynamics of trout on humpback chub in the mainstem Colorado River and that turbidity manipulation may warrant further investigation as a fisheries management tool.

Characterization of the rainbow trout transcriptome using Sanger and 454-Pyrosequencing approaches

USDA-ARS?s Scientific Manuscript database

BACKGROUND: Rainbow trout is an important fish species for aquaculture and a model species for research investigations associated with carcinogenesis, comparative immunology, toxicology and the evolutionary biology. However, to date there is no genome reference sequence to facilitate the development...

Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches

USDA-ARS?s Scientific Manuscript database

Background: Rainbow trout is an important fish for aquaculture and recreational fisheries and serves as a model species for research investigations associated with carcinogenesis, comparative immunology, toxicology and the evolutionary biology. However, to date there is no genome reference sequence...

Mapping of QTL for bacterial cold water disease resistance in rainbow trout

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD) causes significant economic loss in salmonids aquaculture. We previously detected genetic variation in survival following challenge with Flavobacterium psychrophilum (Fp), the causative agent of BCWD in rainbow trout, and a family-based selection program to impro...

Effects of phytoestrogens on protein turnover in rainbow trout primary myocytes

USDA-ARS?s Scientific Manuscript database

Soybean-derived ingredients used in aquaculture feeds may contain phytoestrogens, but it is unknown if these compounds can mimic the catabolic effects of estradiol in fish muscle. Six day-old rainbow trout primary myocytes were exposed to increasing concentrations (10 nM – 100 µM) of either geniste...

Histopathological findings in farmed rainbow trout (Oncorhynchus mykiss) naturally infected with 3 different Aeromonas species

PubMed Central

Zepeda-Velázquez, Andrea Paloma; Vega-Sánchez, Vicente; Salgado-Miranda, Celene; Soriano-Vargas, Edgardo

2015-01-01

This study describes the macroscopic and microscopic lesions in farmed rainbow trout (Oncorhynchus mykiss) naturally infected with genetically identified Aeromonas salmonicida, A. hydrophila, and A. veronii species. The genus Aeromonas includes bacteria that naturally inhabit both waterways and organisms. At least 27 Aeromonas species have been identified to date, some of which can cause significant economic losses in aquaculture. As up to 68.8% of Aeromonas isolates may be misidentified in routine biochemical and phenotypic tests, however, reported cases of Aeromonas infection in fish may be wrongly identified. Our findings confirmed that the 3 Aeromonas species studied are associated with septicemia and dermal lesions in rainbow trout. PMID:26130859

Microsomal biotransformation of chlorpyrifos, parathion and fenthion in rainbow trout (Oncorhynchus mykiss) and coho salmon (Oncorhynchus kisutch): mechanistic insights into interspecific differences in toxicity

PubMed Central

Lavado, Ramon

2010-01-01

Rainbow trout often serve as a surrogate species evaluating xenobiotic toxicity in cold-water species including other salmonids of the same genus, which are listed as threatened or endangered. Biotransformation tends to show species-specific patterns that influence susceptibility to xenobiotic toxicity, particularly organophoshpate insecticides (OPs). To evaluate the contribution of biotransformation in the mechanism of toxicity of three organophosphate (phosphorothionate) insecticides, chlorpyrifos, parathion and fenthion, microsomal bioactivation and detoxification pathways were measured in gills, liver and olfactory tissues in juvenile rainbow trout (Oncorhynchus mykiss) and compared to juvenile coho salmon (Oncorhynchus kisutch). Consistent with species differences in acute toxicity, significantly higher chlorpyrifos bioactivation was found in liver microsomes of rainbow trout (up to 2-fold) when compared with coho salmon. Although bioactivation to the oxon was observed, the catalytic efficiency towards chlorpyrifos dearylation (detoxification) was significantly higher in liver for both species (1.82 and 0.79 for trout and salmon, respectively) when compared to desulfuration (bioactivation). Bioactivation of parathion to paraoxon was significantly higher (up to 2.2-fold) than detoxification to p-nitrophenol in all tissues of both species with rates of conversion in rainbow trout, again significantly higher than coho salmon. Production of fenoxon and fenthion sulfoxides from fenthion was detected only in liver and gills of both species with activities in rainbow trout significantly higher than coho salmon. NADPH-Dependent hydrolysis of fenthion was observed in all tissues, and was the only activity detected in olfactory tissues. These results indicate rainbow trout are more sensitive than coho salmon to the acute toxicity of OP pesticides because trout have higher catalytic rates of oxon formation. Thus, rainbow trout may serve as a conservative surrogate

Microsomal biotransformation of chlorpyrifos, parathion and fenthion in rainbow trout (Oncorhynchus mykiss) and coho salmon (Oncorhynchus kisutch): mechanistic insights into interspecific differences in toxicity.

PubMed

Lavado, Ramon; Schlenk, Daniel

2011-01-17

Rainbow trout often serve as a surrogate species evaluating xenobiotic toxicity in cold-water species including other salmonids of the same genus, which are listed as threatened or endangered. Biotransformation tends to show species-specific patterns that influence susceptibility to xenobiotic toxicity, particularly organophosphate insecticides (OPs). To evaluate the contribution of biotransformation in the mechanism of toxicity of three organophosphate (phosphorothionate) insecticides, (chlorpyrifos, parathion and fenthion), microsomal bioactivation and detoxification pathways were measured in gills, liver and olfactory tissues in juvenile rainbow trout (Oncorhynchus mykiss) and compared to juvenile coho salmon (Oncorhynchus kisutch). Consistent with species differences in acute toxicity, significantly higher chlorpyrifos bioactivation was found in liver microsomes of rainbow trout (up to 2-fold) when compared with coho salmon. Although bioactivation to the oxon was observed, the catalytic efficiency towards chlorpyrifos dearylation (detoxification) was significantly higher in liver for both species (1.82 and 0.79 for trout and salmon, respectively) when compared to desulfuration (bioactivation). Bioactivation of parathion to paraoxon was significantly higher (up to 2.2-fold) than detoxification to p-nitrophenol in all tissues of both species with rates of conversion in rainbow trout, again significantly higher than coho salmon. Production of fenoxon and fenthion sulfoxides from fenthion was detected only in liver and gills of both species with activities in rainbow trout significantly higher than coho salmon. NADPH-dependent cleavage of fenthion was observed in all tissues, and was the only activity detected in olfactory tissues. These results indicate rainbow trout are more sensitive than coho salmon to the acute toxicity of OP pesticides because trout have higher catalytic rates of oxon formation. Thus, rainbow trout may serve as a conservative surrogate

Experimental infection of rainbow trout with Saprolegnia parasitica

USGS Publications Warehouse

Howe, George E.; Stehly, Guy R.

1998-01-01

A method was developed to experimentally induce saprolegniasis in rainbow trout Oncorhynchus mykiss. The development of a reliable method to produce infected fish is essential to efforts to determine the efficacy of various antifungal treatments. Three methods for inducing saprolegniasis were evaluated in waters containing known concentrations of Saprolegnia parasitica zoospores. These methods included application of the following stressors to fish: (1) abrasion and dewatering, (2) water temperature increase, and (3) a combination of abrasion, dewatering, and temperature increase. Neither physical abrasion nor temperature increase stress alone was effective for inducing saprolegniasis. Only 25.9% of fish stressed by abrasion and dewatering alone became infected. Application of both abrasion and temperature stress, however, induced saprolegniasis in 77.8% of fish tested. Most of these fish became infected after 5 d of stress treatments. No fish became infected or died in the positive control group (not stressed but exposed to S. parasitica zoospores) or the negative control group (not stressed or challenged). This method should enable researchers to induce saprolegniasis in rainbow trout to study its pathogenesis or to test the efficacy of antifungal treatments. In conducting efficacy studies, it is important that therapeutic treatments begin promptly after the first signs of saprolegniasis are observed because the disease can progress very quickly and often results in mortality.

Comparative susceptibility of Atlantic salmon, lake trout and rainbow trout to Myxobolus cerebralis in controlled laboratory exposures

USGS Publications Warehouse

Blazer, V.S.; Densmore, Christine L.; Schill, W.B.; Cartwright, Deborah D.; Page, S.J.

2004-01-01

The susceptibility of lake trout Salvelinus namaycush, rainbow trout Oncorhynchus mykiss and Atlantic salmon Salmo salar to Myxobolus cerebralis, the causative agent of whirling disease, was compared in controlled laboratory exposures. A total of 450 (225 for each dose) fry for each species were exposed to a low (200 spores per fish) or high (2000 spores per fish) dose of the infective triactinomyxon. At 22 wk post-exposure, 60 fish from each group, as well as controls for each species, were examined for clinical signs (whirling behavior, blacktail, deformed heads and skeletal deformities), microscopic lesions, and presence of spores. Rainbow trout were highly susceptible to infection, with 100% being positive for spores and with microscopic pathological changes in both exposure groups. Rainbow trout were the only species to show whirling behavior and blacktail. Atlantic salmon were less susceptible, with only 44 and 61% being positive for spores, respectively, in the low and high dose groups, while 68 and 75%, respectively, had microscopic pathology associated with cartilage damage. Rainbow trout heads contained mean spore concentrations of 2.2 (low dose) or 4.0 (high dose) ?? 106 spores g tissue-1. The means for positive Atlantic salmon (not including zero values) were 1.7 (low) and 7.4 (high) ?? 104 spores g tissue-1. Lake trout showed no clinical signs of infection, were negative for spores in both groups and showed no histopathological signs of M. cerebralis infection.

Comparative susceptibility of Atlantic salmon, lake trout and rainbow trout to Myxobolus cerebralis in controlled laboratory exposures.

PubMed

Blazer, V S; Densmore, C L; Schill, W B; Cartwright, D D; Page, S J

2004-01-28

The susceptibility of lake trout Salvelinus namaycush, rainbow trout Oncorhynchus mykiss and Atlantic salmon Salmo salar to Myxobolus cerebralis, the causative agent of whirling disease, was compared in controlled laboratory exposures. A total of 450 (225 for each dose) fry for each species were exposed to a low (200 spores per fish) or high (2000 spores per fish) dose of the infective triactinomyxon. At 22 wk post-exposure, 60 fish from each group, as well as controls for each species, were examined for clinical signs (whirling behavior, blacktail, deformed heads and skeletal deformities), microscopic lesions, and presence of spores. Rainbow trout were highly susceptible to infection, with 100% being positive for spores and with microscopic pathological changes in both exposure groups. Rainbow trout were the only species to show whirling behavior and blacktail. Atlantic salmon were less susceptible, with only 44 and 61% being positive for spores, respectively, in the low and high dose groups, while 68 and 75%, respectively, had microscopic pathology associated with cartilage damage. Rainbow trout heads contained mean spore concentrations of 2.2 (low dose) or 4.0 (high dose) x 10(6) spores g tissue(-1). The means for positive Atlantic salmon (not including zero values) were 1.7 (low) and 7.4 (high) x 10(4) spores g tissue(-1). Lake trout showed no clinical signs of infection, were negative for spores in both groups and showed no histopathological signs of M. cerebralis infection.

The effects of myxobolus cerebralis on the physiological performance of whirling disease resistant and susceptible strains of rainbow trout

USGS Publications Warehouse

Fetherman, E.R.; Myrick, Christopher A.; Winkelman, D.L.; Schisler, G.J.

2011-01-01

The development of rainbow trout Oncorhynchus mykiss strains that are resistant to whirling disease has shown promise as amanagement tool for populationsin areas where Myxobolus cerebralisis present. However, the physiological effects of the disease on characteristics necessary for fish survival in natural river conditions have not been tested in many of these strains. Five rainbow trout strains were evaluated for their swimming ability and growth characteristics in relation to M. cerebralis exposure: the resistant German rainbow trout (GR) strain (Hofer strain), the susceptible Colorado River rainbow trout (CRR) strain, and three intermediate (hybrid) strains (F1 = GR ?? CRR; F2 = F1 ?? F1; B2 = backcross of F1 ?? CRR). Three broad response patterns among strain and exposure were evident in our study. First, exposure metrics, growth performance, and swimming ability differed among strains. Second, exposure to the parasite did not necessarily produce differences in growth or swimming ability. Exposure to M. cerebralis did not affect batch weight for any strain, and critical swimming velocity did not differ between exposed and unexposed families. Third, although exposure did not necessarily affect growth or swimming ability, individuals that exhibited clinical deformities did show reduced growth and swimming performance; fish with clinical deformities were significantly smaller and had lower critical swimming velocities than exposed fish without clinical deformities. Research and management have focused on GR ?? CRR hybrid strains; however, given the performance of the GR strain in our study, it should not be discounted as a potential broodstock. Additional field trials comparing the GR and F1 strains should be conducted before wholesale adoption of the GR strain to reestablish rainbow trout populations in Colorado. ?? American Fisheries Society 2011.

A comparison of susceptibility to Myxobolus cerebralis among strains of rainbow trout and steelhead in field and laboratory trials

USGS Publications Warehouse

Densmore, Christine L.; Blazer, V.S.; Cartwright, Deborah D.; Schill, W.B.; Schachte, J.H.; Petrie, C.J.; Batur, M.V.; Waldrop, T.B.; Mack, A.; Pooler, P.S.

2001-01-01

Three strains of rainbow trout and steelhead Oncorhynchus mykiss were evaluated for the presence of whirling disease in field and laboratory trials. In the field exposures, fingerling Salmon River steelhead and Cayuga Lake and Randolph strains of rainbow trout were placed in wire cages in an earthen, stream-fed pond in New York State that was known to harbor Myxobolus cerebralis. Control fish were held at another hatchery that was free of whirling disease. In the controlled trials at the National Fish Health Research Laboratory, fingerling steelhead and Cayuga Lake and Mount Lassen rainbow trout were exposed to triactinomyxons at low (200 triactinomyxons/fish) or high (2,000 triactinomyxons/fish) levels for 2 h. Controls of each group were sham-exposed. Following an incubation period of 154 d for laboratory trials and 180 d for field trials, cranial tissue samples were taken for spore enumeration (field and laboratory trials) and histological analyses (laboratory only). Clinical signs of disease, including whirling behavior, blacktail, and skeletal deformities, were recorded for each fish in the laboratory trial at the terminal sampling. No clinical evidence of disease was noted among fish in the field trials. Clinical signs were noted among all strains in the laboratory trials at both exposure levels, and these signs were consistently greatest for the Mount Lassen strain. Whirling and skeletal deformities were more evident in the steelhead than in the Cayuga Lake rainbow trout; blacktail was more common in the Cayuga Lake fish. In both field and laboratory trials, spore counts were significantly higher for Cayuga Lake rainbow trout than in steelhead. In laboratory trials, moderate to marked cranial tissue lesions predominated in all three strains.

BIOACCUMULATION AND BIOTRANSFORMATION OF CHIRAL TRIAZOLE FUNGICIDES IN RAINBOW TROUT (ONCORHYNCHUS MYKISS)

EPA Science Inventory

There are very little data on the bioaccumulation and biotransformation of current-use pesticides (CUPs) despite the fact that such data are critical in assessing their fate and potential toxic effects in aquatic organisms. To help address this issue, juvenile rainbow trout (Onco...

Factors affecting swimming performance of fasted rainbow trout with implications of exhaustive exercise on overwinter mortality

USGS Publications Warehouse

Simpkins, D.G.; Hubert, W.A.; Del Rio, C.M.; Rule, D.C.

2004-01-01

We evaluated the effects of body size, water temperature, and sustained swimming activity on swimming performance and the effects of exhaustive exercise on mortality of fasted juvenile rainbow trout. Fasting caused swimming performance to decline more rapidly for small fish than large fish, and warmer water temperatures and sustained swimming activity further decreased swimming performance. Exhaustive exercise increased mortality among fasted fish. Our observations suggest that juvenile rainbow trout with little or no food intake during winter can swim for long periods of time with little effect on mortality, but swimming to exhaustion can enhance mortality, especially among the smallest juveniles.

Sequence analysis of the internal transcribed spacer (ITS) region reveals a novel clade of Ichthyophonus sp. from rainbow trout

USGS Publications Warehouse

Rasmussen, C.; Purcell, M.K.; Gregg, J.L.; LaPatra, S.E.; Winton, J.R.; Hershberger, P.K.

2010-01-01

The mesomycetozoean parasite Ichthyophonus hoferi is most commonly associated with marine fish hosts but also occurs in some components of the freshwater rainbow trout Oncorhynchus mykiss aquaculture industry in Idaho, USA. It is not certain how the parasite was introduced into rainbow trout culture, but it might have been associated with the historical practice of feeding raw, ground common carp Cyprinus carpio that were caught by commercial fisherman. Here, we report a major genetic division between west coast freshwater and marine isolates of Ichthyophonus hoferi. Sequence differences were not detected in 2 regions of the highly conserved small subunit (18S) rDNA gene; however, nucleotide variation was seen in internal transcribed spacer loci (ITS1 and ITS2), both within and among the isolates. Intra-isolate variation ranged from 2.4 to 7.6 nucleotides over a region consisting of ~740 bp. Majority consensus sequences from marine/anadromous hosts differed in only 0 to 3 nucleotides (99.6 to 100% nucleotide identity), while those derived from freshwater rainbow trout had no nucleotide substitutions relative to each other. However, the consensus sequences between isolates from freshwater rainbow trout and those from marine/anadromous hosts differed in 13 to 16 nucleotides (97.8 to 98.2% nucleotide identity).

Response of steelhead/rainbow trout (Oncorhynchus mykiss) populations to debris flows

Treesearch

Jason L. White; Bret C. Harvey

2017-01-01

To better understand the effects of debris flows on salmonid populations, we studied juvenile steelhead/rainbow trout (Oncorhynchus mykiss) populations in six streams in the Klamath Mountains of northern California: three affected by debris flows on 01 January 1997 and three that experienced elevated streamflows but no debris flows. We surveyed...

Genetic improvement of feed conversion ratio via indirect selection against lipid deposition in farmed rainbow trout (Oncorhynchus mykiss Walbaum).

PubMed

Kause, Antti; Kiessling, Anders; Martin, Samuel A M; Houlihan, Dominic; Ruohonen, Kari

2016-11-01

In farmed fish, selective breeding for feed conversion ratio (FCR) may be possible via indirectly selecting for easily-measured indicator traits correlated with FCR. We tested the hypothesis that rainbow trout with low lipid% have genetically better FCR, and that lipid% may be genetically related to retention efficiency of macronutrients, making lipid% a useful indicator trait. A quantitative genetic analysis was used to quantify the benefit of replacing feed intake in a selection index with one of three lipid traits: body lipid%, muscle lipid% or viscera% weight of total body weight (reflecting visceral lipid). The index theory calculations showed that simultaneous selection for weight gain and against feed intake (direct selection to improve FCR) increased the expected genetic response in FCR by 1·50-fold compared with the sole selection for growth. Replacing feed intake in the selection index with body lipid%, muscle lipid% or viscera% increased genetic response in FCR by 1·29-, 1·49- and 1·02-fold, respectively, compared with the sole selection for growth. Consequently, indirect selection for weight gain and against muscle lipid% was almost as effective as direct selection for FCR. Fish with genetically low body and muscle lipid% were more efficient in turning ingested protein into protein weight gain. Both physiological and genetic mechanisms promote the hypothesis that low-lipid% fish are more efficient. These results highlight that in breeding programmes of rainbow trout, control of lipid deposition improves not only FCR but also protein-retention efficiency. This improves resource efficiency of aquaculture and reduces nutrient load to the environment.

Characterization of the rainbow trout spleen transcriptome and identification of immune-related genes

USDA-ARS?s Scientific Manuscript database

Disease susceptibility affects production efficiency and profitability in rainbow trout aquaculture. There is limited information available regarding the functions and mechanisms of teleost immune pathways. Immunogenomics provides powerful approaches to identify disease resistance genes/gene pathway...

Computational estimation of rainbow trout estrogen receptor binding affinities for environmental estrogens

DOE Office of Scientific and Technical Information (OSTI.GOV)

Shyu, Conrad; Cavileer, Timothy D.; Nagler, James J.

2011-02-01

Environmental estrogens have been the subject of intense research due to their documented detrimental effects on the health of fish and wildlife and their potential to negatively impact humans. A complete understanding of how these compounds affect health is complicated because environmental estrogens are a structurally heterogeneous group of compounds. In this work, computational molecular dynamics simulations were utilized to predict the binding affinity of different compounds using rainbow trout (Oncorhynchus mykiss) estrogen receptors (ERs) as a model. Specifically, this study presents a comparison of the binding affinity of the natural ligand estradiol-17{beta} to the four rainbow trout ER isoformsmore » with that of three known environmental estrogens 17{alpha}-ethinylestradiol, bisphenol A, and raloxifene. Two additional compounds, atrazine and testosterone, that are known to be very weak or non-binders to ERs were tested. The binding affinity of these compounds to the human ER{alpha} subtype is also included for comparison. The results of this study suggest that, when compared to estradiol-17{beta}, bisphenol A binds less strongly to all four receptors, 17{alpha}-ethinylestradiol binds more strongly, and raloxifene has a high affinity for the {alpha} subtype only. The results also show that atrazine and testosterone are weak or non-binders to the ERs. All of the results are in excellent qualitative agreement with the known in vivo estrogenicity of these compounds in the rainbow trout and other fishes. Computational estimation of binding affinities could be a valuable tool for predicting the impact of environmental estrogens in fish and other animals.« less

Effects on Biotransformation, Oxidative Stress, and Endocrine Disruption in Rainbow Trout (Oncorhynchus mykiss) Exposed to Hydraulic Fracturing Flowback and Produced Water.

PubMed

He, Yuhe; Folkerts, Erik J; Zhang, Yifeng; Martin, Jonathan W; Alessi, Daniel S; Goss, Greg G

2017-01-17

The effects of hydraulic fracturing (HF) flowback and produced water (HF-FPW), a complex saline mixture of injected HF fluids and deep formation water that return to the surface, was examined in rainbow trout (Oncorhynchus mykiss). Exposure to HF-FPWs resulted in significant induction of ethoxyresorufin-O-deethylase (EROD) activity in both liver and gill tissues. Increased lipid peroxidation via oxidative stress was also detected by thiobarbituric acid reactive substances (TBARS) assay. The mRNA expressions of a battery of genes related to biotransformation, oxidative stress, and endocrine disruption were also measured using quantitative real-time polymerase chain reaction (Q-RT-PCR). The increased expression of cyp1a (2.49 ± 0.28-fold), udpgt (2.01 ± 0.31-fold), sod (1.67 ± 0.09-fold), and gpx (1.58 ± 0.10-fold) in raw sample exposure group (7.5%) indicated elevated metabolic enzyme activity, likely through the aryl hydrocarbon receptor pathway, and generation of reactive oxygen species. In addition, the elevated vtg and era2 expression demonstrated endocrine disrupting potential exerted by HF-FPW in rainbow trout. The overall results suggested HF-FPW could cause significant adverse effects on fish, and the organic contents might play the major role in its toxicity. Future studies are needed to help fully determine the toxic mechanism(s) of HF-FPW on freshwater fish, and aid in establishing monitoring, treatment, and remediation protocols for HF-FPW.

INFLUENCE OF TEMPERATURE ON AN ESTROGEN-RESPONSIVE RAINBOW TROUT CELL TRANSFECTION ASSAY

EPA Science Inventory

One uncertainty in extrapolating estrogenic effects in mammalian systems to those in fish and wildlife is the influence that temperature has on these effects. A reporter gene assay in cultured rainbow trout cell lines was used to determine the influence of temperature on the exp...

A New and Improved Rainbow Trout (Oncorhynchus mykiss) Reference Genome Assembly

USDA-ARS?s Scientific Manuscript database

In an effort to improve the rainbow trout reference genome assembly, we re-sequenced the doubled-haploid Swanson line using the longest available reads from the Illumina technology; generating over 510 million paired-end shotgun reads (2x260nt), and 1 billion mate-pair reads (2x160nt) from four sequ...

Glucosensing capacity of rainbow trout telencephalon.

PubMed

Otero-Rodiño, C; Rocha, A; Álvarez-Otero, R; Ceinos, R M; López-Patiño, M A; Míguez, J M; Cerdá-Reverter, J M; Soengas, J L

2018-03-01

To assess the hypothesis of glucosensing systems present in fish telencephalon, we first demonstrated in rainbow trout, by in situ hybridisation, the presence of glucokinase (GK). Then, we assessed the response of glucosensing markers in rainbow trout telencephalon 6 hours after i.c.v. treatment with glucose or 2-deoxyglucose (inducing glucoprivation). We evaluated the response of parameters related to the mechanisms dependent on GK, liver X receptor (LXR), mitochondrial activity, sweet taste receptor and sodium-glucose linked transporter 1 (SGLT-1). We also assessed mRNA abundance of neuropeptides involved in the metabolic control of food intake (agouti-related protein, neuropeptide Y, pro-opiomelanocortin, and cocaine- and amphetamine-related transcript), as well as the abundance and phosphorylation status of proteins possibly involved in linking glucosensing with neuropeptide expression, such as protein kinase B (AkT), AMP-activated protein kinase (AMPK), mechanistic target of rapamycin and cAMP response element-binding protein (CREB). The responses obtained support the presence in the telencephalon of a glucosensing mechanism based on GK and maybe one based on LXR, although they do not support the presence of mechanisms dependent on mitochondrial activity and SGLT-1. The mechanism based on sweet taste receptor responded to glucose but in a converse way to that characterised previously in the hypothalamus. In general, systems responded only to glucose but not to glucoprivation. Neuropeptides did not respond to glucose or glucoprivation. By contrast, the presence of glucose activates Akt and inhibits AMPK, CREB and forkhead box01. This is the first study in any vertebrate species in which the response to glucose of putative glucosensing mechanisms is demonstrated in the telencephalon. Their role might relate to processes other than homeostatic control of food intake, such as the hedonic and reward system. © 2018 British Society for Neuroendocrinology.

Stem cell activity of type A spermatogonia is seasonally regulated in rainbow trout.

PubMed

Sato, Mana; Hayashi, Makoto; Yoshizaki, Goro

2017-06-01

Spermatogonial stem cells (SSCs) support continuous production of sperm throughout the male's life. However, the biological characteristics of SSCs are poorly understood in animals exhibiting seasonal reproduction, even though most wild animals are seasonal breeders. During the spermiation season in rainbow trout, the lumen of the testes contains only spermatozoa and scattered type A spermatogonia (ASG) along the walls of the testicular lobules. These few remaining ASG, designated "residual ASG," are the only germ cells capable of supporting the next spermatogenesis, suggesting that the residual ASG are true SSCs. However, whether residual ASG can behave as SSCs in any teleost species is unknown. In this study, we attempted to clarify the biological characteristics of SSCs associated with seasonal reproduction in rainbow trout using spermatogonial transplantation. We found that the stem cell activity was clearly regulated seasonally during the annual reproductive cycle. Although the residual ASG exhibited moderate transplantability and colony-forming ability at the beginning of the spermiation season, these parameters decreased dramatically later and remained low until the next spermatogenesis was initiated. Furthermore, no clear correlations were observed between these qualitative changes and previously described morphologic characteristics of ASG or plasma sex steroid levels. Our results suggest that the biological properties of SSC populations in rainbow trout are seasonally regulated by a novel mechanism. © The Authors 2017. Published by Oxford University Press on behalf of Society for the Study of Reproduction. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Revisiting the round bottom flask rainbow experiment

NASA Astrophysics Data System (ADS)

Selmke, Markus; Selmke, Sarah

2018-01-01

A popular demonstration experiment in optics uses a round-bottom flask filled with water to project a circular rainbow on a screen with a hole through which the flask is illuminated. We show how the vessel's wall shifts the first- and second-order bows towards each other and consequently reduces the width of Alexander's dark band. We address the challenge this introduces in observing Alexander's dark band, and explain the importance of a sufficient distance between the flask and the screen. The wall-effect also introduces a splitting of the bows that can easily be misinterpreted.

Influence of spatial curvature of a liquid jet on the rainbow positions: Ray tracing and experimental study

NASA Astrophysics Data System (ADS)

Duan, Qingwei; Zhong, Ruliang; Han, Xiang'e.; Ren, Kuan Fang

2017-07-01

Rainbow refractometry is largely used in optical metrology of particles thanks to its advantages of being non-intrusive, precise and fast. Many authors have contributed to its development and the application in the characterization of liquid jets/droplets. The researches reported in the literature are mainly for the spherical droplets or the liquid jets which can be considered as a cylinder of constant section. However, the section of a real liquid jet, even in the simplest configuration, varies with distance from the exit. The influence of the spatial curvature of the jets must, therefore, be taken into account. In this paper, we report experimental measurements of the shifts of the rainbow positions in the horizontal and vertical directions of a liquid jet and the theoretical investigation with the vectorial complex ray model. It is shown that the shifts of rainbow positions are very sensitive to the spatial curvature of the jets. This work is hoped to provide a new approach to characterizing the structure and the instability of liquid jets.

A hematopoietic virus disease of rainbow trout and sockeye salmon

USGS Publications Warehouse

Amend, Donald F.; Yasutake, William T.; Mead, Robert W.

1969-01-01

A previously undescribed virus disease epizootic of hatchery rainbow trout (Salmo gairdneri) in British Columbia, Canada is presented. In the same locality, a similar virus disease was experienced among hatchery sockeye salmon (Oncorhynchus nerka). Typical symptoms included flashing, fecal casts, hemorrhagic areas at the base of fins, and petechial hemorrhages on the visceral fat and membranes in the abdominal cavity. Histopathologic changes were typified by extensive degeneration and necrosis in the hematopoietic tissues of the kidney and spleen. A virus was isolated from both species of fish on tissue culture and the viruses showed cross-infectivity. Based upon the pathological changes in the hematopoietic tissue and the demonstration of a vital infection, a tentative descriptive name was designated Infectious Hematopoietic Necrosis. The isolated viruses were distinctly different from the infectious pancreatic necrosis or viral hemorrhagic septicemia viruses of trout, but did show similarities to the Oregon sockeye and Sacramento River chinook viruses. Positive identification awaits further tests. The significance of these observations is the reporting of a new viral disease of rainbow trout and the extension of the geographic range of sockeye salmon viruses.

Effects of aquaculture production noise on hearing, growth, and disease resistance of rainbow trout Oncorhynchus mykiss

USGS Publications Warehouse

Wysocki, L.E.; Davidson, J. W.; Smith, M.E.; Frankel, A.S.; Ellison, W.T.; Mazik, P.M.; Popper, A.N.; Bebak, J.

2007-01-01

Intensive aquaculture production often utilizes equipment (e.g., aerators, air and water pumps, harvesters, blowers, filtration systems, and maintenance machinery) that increases noise levels in fish culture tanks. Consequently, chronic exposure to elevated noise levels in tanks could negatively impact cultured species. Possible effects include impairment of the auditory system, increased stress, and reduced growth rates. The objective of this study was to evaluate the long-term effects of sound exposure on the hearing sensitivity, growth, and survival of cultured rainbow trout (Oncorhynchus mykiss). Two cohorts of rainbow trout were cultured for 8??months in replicated tanks consisting of three sound treatments: 115, 130, or 150 decibels referenced at 1 micropascal (dB re 1????Pa root mean square [RMS]) levels. Auditory evoked potential (AEP) recordings revealed no significant differences in hearing thresholds resulting from exposure to increased ambient sound levels. Although there was no evident noise-induced hearing loss, there were significant differences in hearing thresholds between the two fish cohorts examined. No statistical effect of sound treatment was found for growth rate and mortality within each fish cohort. There was no significant difference in mortality between sound treatments when fish were exposed to the pathogen Yersinia ruckeri, but there was significantly different mortality between cohorts. This study indicated that rainbow trout hearing sensitivity, growth, survival, stress, and disease susceptibility were not negatively impacted by noise levels common to recirculating aquaculture systems. These findings should not be generalized to all cultured fish species, however, because many species, including catfish and cyprinids, have much greater hearing sensitivity than rainbow trout and could be affected differently by noise. ?? 2007 Elsevier B.V. All rights reserved.

Behaviour of rainbow trout ( Oncorhynchus mykiss) under defensible and indefensible patterns of food delivery

NASA Astrophysics Data System (ADS)

Saeed Heydarnejad, M.; Purser, G. J.

2010-07-01

The goal of this study was to investigate the behaviour of rainbow trout ( n=30), Oncorhynchus mykiss, in small raceways when either self-feeders (T2) or hand-feeding (t2) were used. The method of food delivery in T2 was defensible while that of t2 was indefensible. Fish in both raceways were subjected to restricted feeding (RF) for 25 days. Food was available in the morning (09:00-10:00) in the downstream area and in the afternoon (16:00-17:00) in the upstream area of the raceways. The results showed that the behaviour of rainbow trout was significantly different under interference competition (T2) for food compared with that under scramble competition (t2). RF in T2 fish limited food availability to meal times when feeding rewards were available while t2 fish only responded to the location of food delivery. The aggressive fish in T2 were dominant, and t2 fish at high densities showed intense social interactions under the indefensible pattern of food distribution; these interactions did not dampen to a minimum level to suppress the development of dominance hierarchies. Further, the stocking density did not break down the dominance hierarchies between the T2 fish. This suggests that decreased efficiency in the search for food or inefficient foraging, induced by interference competition at high densities, affected the behaviour of rainbow trout.

Intra-strain dioxin sensitivity and morphometric effects in swim-up rainbow trout (Oncorhynchus mykiss)

USGS Publications Warehouse

Carvalho, Paulo S. M.; Noltie, Douglas B.; Tillitt, D.E.

2004-01-01

Inter and intra-specific differences in sensitivity of early life stage salmonids to 2,3,7,8-TCDD exposure have been reported, but intra-strain differences have not been found in the literature. Our results indicate that intra-strain variability in terms of embryo mortality (LD50) is small in Eagle Lake strain of rainbow trout, LD50 values ranging from 285 to 457 pg TCDD egg g−1. These results confirm Eagle Lake as a less sensitive strain within rainbow trout, and do not indicate overlap with reported LD50 values for brook or lake trout. Our results also demonstrate that although generalized edema in regions including the yolk-sac are frequently associated with mortality following dioxin exposure, not all edematous fish die. We detected dose-dependent decreases in cranial length, eye diameter, mass, and total length (P<0.05) in viable swim-up rainbow trout. These effects are presumed to indicate more subtle dose-dependent disruptions of the viteline vein vasculature and, therefore, in access to energy sources. A tendency for dose-dependent decrease in liver glycogen reserves concurred with previous results on salmonids and with the well described TCDD-induced alterations in intermediate metabolism of rats and chicken embryos (wasting syndrome). This syndrome could be contributing to the reduced growth that we observed.

DIETARY UPTAKE KINETICS OF 2,2', 5, 5'-TETRACHLOROBIPHENYL IN RAINBOW TROUT

EPA Science Inventory

The disposition of 2,2',5,5'-tetrachlorobiphenyl (TCB) in rainbow trout (Oncorhynchus mykiss) was studied in dietary exposures with live prey. Trout were fed TCB-dosed fathead minnows (Pimephales promelas; 4% of body wt) containing whole-body residues of 244 (low dose) or 1663 (h...

Detection of QTL in rainbow trout affecting survival when challenged with Flavobacterium psychrophilum

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD) causes significant economic loss in salmonid aquaculture. We previously detected genetic variation in survival following challenge with Flavobacterium psychrophilum (Fp), the causative agent of BCWD in rainbow trout (Oncorhynchus mykiss). A family-based selectio...

Yersinia ruckeri Isolates Recovered from Diseased Atlantic Salmon (Salmo salar) in Scotland Are More Diverse than Those from Rainbow Trout (Oncorhynchus mykiss) and Represent Distinct Subpopulations

PubMed Central

Ormsby, Michael J.; Caws, Thomas; Burchmore, Richard; Wallis, Tim; Verner-Jeffreys, David W.

2016-01-01

ABSTRACT Yersinia ruckeri is the etiological agent of enteric redmouth (ERM) disease of farmed salmonids. Enteric redmouth disease is traditionally associated with rainbow trout (Oncorhynchus mykiss, Walbaum), but its incidence in Atlantic salmon (Salmo salar) is increasing. Yersinia ruckeri isolates recovered from diseased Atlantic salmon have been poorly characterized, and very little is known about the relationship of the isolates associated with these two species. Phenotypic approaches were used to characterize 109 Y. ruckeri isolates recovered over a 14-year period from infected Atlantic salmon in Scotland; 26 isolates from infected rainbow trout were also characterized. Biotyping, serotyping, and comparison of outer membrane protein profiles identified 19 Y. ruckeri clones associated with Atlantic salmon but only five associated with rainbow trout; none of the Atlantic salmon clones occurred in rainbow trout and vice versa. These findings suggest that distinct subpopulations of Y. ruckeri are associated with each species. A new O serotype (designated O8) was identified in 56 biotype 1 Atlantic salmon isolates and was the most common serotype identified from 2006 to 2011 and in 2014, suggesting an increased prevalence during the time period sampled. Rainbow trout isolates were represented almost exclusively by the same biotype 2, serotype O1 clone that has been responsible for the majority of ERM outbreaks in this species within the United Kingdom since the 1980s. However, the identification of two biotype 2, serotype O8 isolates in rainbow trout suggests that vaccines containing serotypes O1 and O8 should be evaluated in both rainbow trout and Atlantic salmon for application in Scotland. IMPORTANCE Vaccination plays an important role in protecting Atlantic salmon against the bacterial pathogen Yersinia ruckeri, but, in recent years, there has been an increasing incidence of vaccine breakdown in salmon. This is largely because current vaccines are aimed at

Yersinia ruckeri Isolates Recovered from Diseased Atlantic Salmon (Salmo salar) in Scotland Are More Diverse than Those from Rainbow Trout (Oncorhynchus mykiss) and Represent Distinct Subpopulations.

PubMed

Ormsby, Michael J; Caws, Thomas; Burchmore, Richard; Wallis, Tim; Verner-Jeffreys, David W; Davies, Robert L

2016-10-01

Yersinia ruckeri is the etiological agent of enteric redmouth (ERM) disease of farmed salmonids. Enteric redmouth disease is traditionally associated with rainbow trout (Oncorhynchus mykiss, Walbaum), but its incidence in Atlantic salmon (Salmo salar) is increasing. Yersinia ruckeri isolates recovered from diseased Atlantic salmon have been poorly characterized, and very little is known about the relationship of the isolates associated with these two species. Phenotypic approaches were used to characterize 109 Y. ruckeri isolates recovered over a 14-year period from infected Atlantic salmon in Scotland; 26 isolates from infected rainbow trout were also characterized. Biotyping, serotyping, and comparison of outer membrane protein profiles identified 19 Y. ruckeri clones associated with Atlantic salmon but only five associated with rainbow trout; none of the Atlantic salmon clones occurred in rainbow trout and vice versa These findings suggest that distinct subpopulations of Y. ruckeri are associated with each species. A new O serotype (designated O8) was identified in 56 biotype 1 Atlantic salmon isolates and was the most common serotype identified from 2006 to 2011 and in 2014, suggesting an increased prevalence during the time period sampled. Rainbow trout isolates were represented almost exclusively by the same biotype 2, serotype O1 clone that has been responsible for the majority of ERM outbreaks in this species within the United Kingdom since the 1980s. However, the identification of two biotype 2, serotype O8 isolates in rainbow trout suggests that vaccines containing serotypes O1 and O8 should be evaluated in both rainbow trout and Atlantic salmon for application in Scotland. Vaccination plays an important role in protecting Atlantic salmon against the bacterial pathogen Yersinia ruckeri, but, in recent years, there has been an increasing incidence of vaccine breakdown in salmon. This is largely because current vaccines are aimed at rainbow trout and are

Effects of hybridization between nonnative Rainbow Trout and native Westslope Cutthroat Trout on fitness-related traits

USGS Publications Warehouse

Drinan, Daniel P.; Webb, Molly A. H.; Naish, Kerry A.; Kalinowski, Steven T.; Boyer, Matthew C.; Steed, Amber C.; Shepard, Bradley B.; Muhlfeld, Clint C.

2015-01-01

Hybridization between introduced and native fauna is a risk to native species and may threaten the long-term persistence of numerous taxa. Rainbow Trout Oncorhynchus mykiss has been one of the most widely introduced species around the globe and often hybridizes with native Cutthroat Trout O. clarkii in the Rocky Mountains. Previous work has shown that hybridization negatively affects reproductive success, but identification of the traits contributing to that reduction has been elusive. In this study, we used a combination of field and laboratory techniques to assess how hybridization with Rainbow Trout affects seven traits during several stages of Westslope Cutthroat Trout development: embryonic survival, ova size, ova energy concentration, sperm motility, juvenile weight, juvenile survival, and burst swimming endurance. Rainbow Trout admixture was correlated with an increase in embryonic survival and ova energy concentration but with a decrease in juvenile weight and burst swimming endurance. These correlations differed from previously observed patterns of reproductive success and likely do not explain the declines in reproductive success associated with admixture. Future investigation of additional, unstudied traits and the use of different environments may shed light on the traits responsible for reproductive success in admixed Cutthroat Trout.

Induction of monooxygenation in rainbow trout by polybrominated biphenyls: a comparative study.

PubMed Central

Elcombe, C R; Lech, J J

1978-01-01

Two commercial polychlorinated biphenyl mixtures (Aroclor 1254 and Aroclor 1242) and one polybrominated biphenyl mixture (FireMaster BP-6) were examined for their abilities to induce hepatic microsomal monooxygenation in rainbow trout (Salmo gairdneri). Pretreatment of rainbow trout with Aroclors 1254 and 1242 (150 mg/kg IP) resulted in an approximate 10-fold induction of arylhydrocarbon (benzo[a]pyrene) hydroxylation, ethoxycoumarin-O-deethylation and ethoxyresorufin-O-deethylation within 7 days after injection. These enzyme activities remained elevated above control values for at least 2-3 weeks. Administration of FireMaster BP-6 (150 mg/kg IP) also resulted in an induction of several monooxygenase activities. Arylhydrocarbon (benzo[a]pyrene) hydroxylation, ethoxycoumarin-O-deethylation and ethoxyresorufin-O-deethylation were increased by 6-, 3,- and 25-fold, respectively. Only the latter two activities remained elevated two weeks post-injection. Ethylmorphine-N-demethylation was unaffected by the polyhalogenated biphenyls. Significant increases in P-450 hemoprotein were not observed after pretreatment with any of the polyhalogenated biphenyls studied. PMID:209992

Importance of tributary streams for rainbow trout reproduction: insights from a small stream in Georgia and a bi-genomic approach

USGS Publications Warehouse

Lee, D.; Lack, Justin B.; Van Den Bussche, Ronald A.; Long, James M.

2012-01-01

Tributaries of tailwater fisheries in the southeastern USA have been used for spawning by stocked rainbow trout (Oncorhynchus mykiss), but their importance may have been underestimated using traditional fish survey methods such as electrofishing and redd counts. We used a bi-genomic approach, mitochondrial DNA sequences and nuclear microsatellite loci, to estimate the number of spawning adults in one small tributary (Cabin Creek) of the Chattahoochee River, Georgia, where rainbow trout are known to spawn and have successful recruitment. We extracted and analysed DNA from seven mature male rainbow trout and four juveniles that were captured in February 2006 in Cabin Creek and from 24 young-of-year (YOY) trout that were captured in April 2006. From these samples, we estimated that 24 individuals were spawning to produce the amount of genetic variation observed in the juveniles and YOY, although none of the mature males we sampled were indicated as sires. Analysis of the mitochondrial D-loop region identified four distinct haplotypes, suggesting that individuals representing four maternal lineages contributed to the offspring. Our analyses indicated that many more adults were spawning in this system than previously estimated with direct count methods and provided insight into rainbow trout spawning behavior.

Seasonal movements and habitat use of Potamodromous Rainbow Trout across a complex Alaska riverscape

USGS Publications Warehouse

Fraley, Kevin M.; Falke, Jeffrey A.; Yanusz, Richard; Ivey, Sam S.

2016-01-01

Potamodromous Rainbow Trout Oncorhynchus mykiss are an important ecological and recreational resource in freshwater ecosystems of Alaska, and increased human development, hydroelectric projects, and reduced escapement of Chinook Salmon Oncorhynchus tshawytscha may threaten their populations. We used aerial and on-the-ground telemetry tracking, a digital landscape model, and resource selection functions to characterize seasonal movements and habitat use of 232 adult (>400 mm FL) Rainbow Trout across the complex, large (31,221 km2) Susitna River basin of south-central Alaska during 2003–2004 and 2013–2014. We found that fish overwintered in main-stem habitats near tributary mouths from November to April. After ice-out in May, fish ascended tributaries up to 51 km to spawn and afterward moved downstream to lower tributary reaches, assumedly to intercept egg and flesh subsidies provided by spawning salmonids in July and August. Fish transitioned back to main-stem overwintering habitats at the onset of autumn when salmonid spawning waned. Fidelity to tributaries where fish were initially tagged varied across seasons but was high (>0.75) in three out of four drainages. Model-averaged resource selection functions suggested that Rainbow Trout habitat use varied seasonally; fish selected low-gradient, sinuous, main-stem stream reaches in the winter, reaches with suitably sized substrate during spawning, larger reaches during the feeding season prior to the arrival of spawning salmonids, and reaches with high Chinook Salmon spawning habitat potential following the arrival of adult fish. We found little difference in movement patterns between males and females among a subset of fish for which sex was determined using genetic analysis. As most Rainbow Trout undertake extensive movements within and among tributaries and make use of a variety of seasonal habitats to complete their life histories, it will be critical to take a basinwide approach to their management (i

Genomic selection exploits within-family genetic variation for disease resistance in rainbow trout

USDA-ARS?s Scientific Manuscript database

Flavobacterium psychrophilum is the etiological agent causing bacterial cold water disease (BCWD) in salmonid fish. Previous breeding strategies to reduce losses due to BCWD involve testing and determining phenotypic differences between multiple families of rainbow trout. These results were used to ...

Determination of niclosamide residues in rainbow trout (Oncorhynchus mykiss) and channel catfish (Ictalurus punctatus) fillet tissue by high-performance liquid chromatography

USGS Publications Warehouse

Schreier, Theresa M.; Dawson, V.K.; Cho, Yirang; Spanjers, N.J.; Boogaard, M.A.

2000-01-01

Bayluscide [the ethanolamine salt of niclosamide (NIC)] is a registered piscicide used in combination with 3-(trifluoromethyl)-4-nitrophenol (TFM) to control sea lamprey populations in streams tributary to the Great Lakes. A high-performance liquid chromatography (HPLC) method was developed for the determination of NIC residues in muscle fillet tissues of fish exposed to NIC and TFM during sea lamprey control treatments. NIC was extracted from fortified channel catfish and rainbow trout fillet tissue with a series of acetone extractions and cleaned up on C-18 solid-phase extraction cartridges. NIC concentrations were determined by HPLC with detection at 360 and 335 nm for rainbow trout and catfish, respectively. Recovery of NIC from rainbow trout (n = 7) fortified at 0.04 mu g/g was 77 +/- 6.5% and from channel catfish (n = 7) fortified at 0.02 mu g/g was 113 +/- 11%. NIC detection limit was 0.0107 mu g/g for rainbow trout and 0.0063 mu g/g for catfish. Percent recovery of incurred radioactive residues by this method from catfish exposed to [C-14]NIC was 89.3 +/- 4.1%. Percent recoveries of NIC from fortified storage stability tissue samples for rainbow trout (n = 3) analyzed at 5 and 7.5 month periods were 78 +/- 5.1 and 68 +/- 2.4%, respectively. Percent recoveries of NIC from fortified storage stability tissue samples for channel catfish (n = 3) analyzed at 5 and 7.5 month periods were 88 +/- 13 and 76 +/- 21%, respectively.

Developing acute-to-chronic toxicity ratios for lead, cadmium, and zinc using rainbow trout, a mayfly, and a midge

USGS Publications Warehouse

Mebane, C.A.; Hennessy, D.P.; Dillon, F.S.

2008-01-01

In order to estimate acute-to-chronic toxicity ratios (ACRs) relevant to a coldwater stream community, we exposed rainbow trout (Oncorhynchus mykiss) to cadmium (Cd), lead (Pb), and zinc (Zn) in 96-h acute and 60+ day early-life stage (ELS) exposures. We also tested the acute and sublethal responses of a mayfly (Baetis tricaudatus) and a midge (Chironomus dilutus, formerly C. tentans) with Pb. We examine the statistical interpretation of test endpoints and the acute-to-chronic ratio concept. Increasing the number of control replicates by 2 to 3x decreased the minimum detectable differences by almost half. Pb ACR estimates mostly increased with increasing acute resistance of the organisms (rainbow trout ACRs rainbow trout and Cd were 0.6 and 0.95; Zn about 1.0; and for Pb 3.3 and 11. The comparable Pb ACRs for the mayfly and Chironomus were 5.2 and 51 respectively. Our rainbow trout ACRs with Pb were about 5-20x lower than earlier reports with salmonids. We suggest discounting previous ACR results that used larger and older fish in their acute tests. ?? 2007 GovernmentEmployee: U.S. Geological Survey.

In vivo fitness correlates with host-specific virulence of Infectious hematopoietic necrosis virus (IHNV) in sockeye salmon and rainbow trout

USGS Publications Warehouse

Penaranda, M.M.D.; Wargo, A.R.; Kurath, G.

2011-01-01

The relationship between virulence and overall within-host fitness of the fish rhabdovirus Infectious hematopoietic necrosis virus (IHNV) was empirically investigated in vivo for two virus isolates belonging to different IHNV genogroups that exhibit opposing host-specific virulence. U group isolates are more virulent in sockeye salmon and M group isolates are more virulent in rainbow trout. In both single and mixed infections in the two fish hosts, the more virulent IHNV type exhibited higher prevalence and higher viral load than the less virulent type. Thus, a positive correlation was observed between higher in vivo fitness and higher host-specific virulence in sockeye salmon and rainbow trout. Comparisons of mean viral loads in single and mixed infections revealed no evidence for limitation due to competition effects between U and M viruses in either rainbow trout or sockeye salmon co-infections.

Novel molecular markers differentiate Oncorhynchus mykiss (rainbow trout and steelhead) and the O. clarki (cutthroat trout) subspecies

USGS Publications Warehouse

Ostberg, C.O.; Rodriguez, R.J.

2002-01-01

A suite of 26 PCR-based markers was developed that differentiates rainbow (Oncorhynchus mykiss) and coastal cutthroat trout (O. clarki clarki). The markers also differentiated rainbow from other cutthroat trout subspecies (O. clarki), and several of the markers differentiated between cutthroat trout subspecies. This system has numerous positive attributes, including: nonlethal sampling, high species-specificity and products that are easily identified and scored using agarose gel electrophoresis. The methodology described for developing the markers can be applied to virtually any system in which numerous markers are desired for identifying or differentiating species or subspecies.

Contribution of High-Order Rainbows to the Scattering of a Gaussian Laser Beam by a Spherical Particle

NASA Technical Reports Server (NTRS)

Lock, James A.

1993-01-01

I review the theory of the scattering of a Gaussian laser beam by a dielectric spherical particle and give the details for constructing a computer program to implement the theory. Computational results indicate that if the width of the laser beam is much less than the diameter of the particle and if the axis of the beam is incident near the edge of the particle, the fifth-, sixth-, and ninth-order rainbows should be evident in the far-field scattered intensity. I performed an experiment that yielded tentative evidence for the presence of the sixth- order rainbow.

Estradiol regulates expression of miRNAs associated with myogenesis in rainbow trout

USDA-ARS?s Scientific Manuscript database

17-Estradiol (E2) is a steroid hormone that negatively affects muscle growth in rainbow trout, but the mechanism associated with this response is not fully understood. To better characterize the effects of E2 on muscle, we identified differentially regulated microRNAs (miRNAs) and muscle atrophy-rel...

Pathogenic infection confounds induction of the estrogenic biomarker vitellogenin in rainbow trout

USDA-ARS?s Scientific Manuscript database

To examine the behavior of the estrogenic biomarker vitellogenin (VTG) under the combined impact of estrogens and pathogens, parasite-infected or noninfected rainbow trout were exposed to two doses of 17 beta-estradiol (E2). Infected and E2-exposed fish showed significantly lower hepatic VTG mRNA le...

The trenbolone acetate affects the immune system in rainbow trout, Oncorhynchus mykiss.

PubMed

Massart, Sophie; Redivo, Baptiste; Flamion, Enora; Mandiki, S N M; Falisse, Elodie; Milla, Sylvain; Kestemont, Patrick

2015-06-01

In aquatic systems, the presence of endocrine-disrupting chemicals (EDC) can disrupt the reproductive function but also the immune system of wildlife. Some studies have investigated the effects of androgens on the fish immune parameters but the mechanisms by which the xenoandrogens alter the immunity are not well characterized. In order to test the effects of trenbolone acetate (TbA) on fish immune system, we exposed rainbow trout male juveniles during three weeks to TbA levels at 0.1 and 1μg/L. The present results suggest that TbA impacts, in a tissue-dependent manner, the rainbow trout immunity by affecting primarily the humoral immunity. Indeed, TbA inhibited lysozyme activity in plasma and liver and enhanced the alternative complement pathway activity (ACH50) in kidney. In plasma, the modulation of the complement system was time-dependent. The mRNA expression of genes encoding some cytokines such as renal TGF-β1, TNF-α in skin and hepatic IL-1β was also altered in fish exposed to TbA. Regarding the cellular immunity, no effect was observed on the leucocyte population. However, the expression of genes involved in the development and maturation of lymphoid cells (RAG-1 and RAG-2) was decreased in TbA-treated fish. Among those effects, we suggest that the modulation of RAG-1 and mucus apolipoprotein-A1 gene expression as well as plasma and hepatic lysozyme activities are mediated through the action of the androgen receptor. All combined, we conclude that trenbolone affects the rainbow trout immunity. Copyright © 2015 Elsevier B.V. All rights reserved.

Geological mapping of the Rainbow Massif, Mid-Atlantic Ridge, 36°14'N

NASA Astrophysics Data System (ADS)

Ildefonse, B.; Fouquet, Y.; Hoisé, E.; Dyment, J.; Gente, P.; Thibaud, R.; Bissessur, D.; Yatheesh, V.; Momardream 2008 Scientific Party*, T.

2008-12-01

The Rainbow hydrothermal field at 36°14'N on the Mid-Atlantic Ridge is one of the few known sites hosted in ultramafic basement. The Rainbow Massif is located along the non-transform offset between the AMAR and South AMAR second-order ridge segments, and presents the characteristic dome morphology of oceanic core complexes, although no corrugated surface has been observed so far. One of the objectives of Cruises MOMAR DREAM (July 2007, R/V Pourquoi Pas ?; Aug-Sept 2008, R/V Atalante) was to study the petrological and structural context of the hydrothermal system at the scale of the Rainbow Massif. Our geological sampling complements previous ones achieved during Cruises FLORES (1997) and IRIS (2001), and consisted in dredge hauls, and submersible dives by manned submersible Nautile and ROV Victor. The tectonics of the Rainbow Massif is dominated by a N-S trending fault pattern on the western flank of the massif, and a series of SW-NW ridges on its northeastern side. The active hydrothermal site is located in the area were these two systems crosscut. The most abundant recovered rock type is peridotite (harzburgite and dunite) that presents a variety of serpentinization styles and intensity, and a variety of deformation styles (commonly undeformed, sometimes displaying ductile or brittle foliations). Serpentinites are frequently oxidized. Some peridotite samples have melt impregnation textures. Massive chromitite was recovered in one dredge haul. Variously evolved gabbroic rocks were collected as discrete samples or as centimeter to decimeter-thick dikes in peridotites. Basalts and fresh basaltic glass were also sampled in talus and sediments on the southwestern and northeastern flanks of the massif. Our sampling is consistent with the lithological variability encountered in oceanic core complexes along the Mid-Atlantic Ridge and Southwest Indian Ridge. The stockwork of the hydrothermal system has been sampled on the western side of the present-day hydrothermal

An egg injection method for assessing early life stage mortality of polychlorinated dibenzo-p-dioxins, dibenzofurans, and biphenyls in rainbow trout, (Oncorhynchus mykiss)

USGS Publications Warehouse

Walker, M.K.; Hufnagle, L.C.; Clayton, M.K.; Peterson, R.E.

1992-01-01

To characterize the risk that polychlorinated dibenzo-p-dioxins (PCDDs), dibenzofurans (PCDFs), and biphenyls (PCBs) pose to salmonid early life stage survival, we developed a method to expose rainbow trout (Oncorhynchus mykiss) eggs to graded doses of PCDD, PCDF, and PCB congeners, using 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) as a prototype. Rainbow trout eggs were injected 24–50 h post-fertilization with 0.2 μl of 50 mM phosphatidylcholine (PC) liposomes (control) or 0.2 μl of 5–7 graded doses of TCDD incorporated into 50 mM PC liposomes. Injection volume never exceeded 0.6% egg volume. Immediately following injection, the injection site was sealed with Super glue®, resulting in 92–97% of TCDD dose retained by the egg. Following both egg injection and waterborne egg exposure. TCDD toxicity in rainbow trout was manifested by half-hatching mortality but predominantly by sac fry mortality associated with hemorrhages, pericardial edema, and yolk sac edema. TCDD LD50s, following injection and waterborne exposure of rainbow trout eggs, were 421 (331–489) and 439 (346–519) pg TCDD/g egg (LD50, 95% fiducial limits), respectively. As in rainbow trout, TCDD toxicity in lake trout (Salvelinus namaycush) following the same two routes of exposure was manifested by half-hatching mortality but predominantly by sac fry mortality preceded by hemorrhages and yolk sac edema. LD50s, based on the dose of TCDD in lake trout eggs, were 47 (21–65) and 65 (60–71) pg/g following injection and waterborne exposure, respectively. The egg injection method is ideal for assessing the relationship between early life stage mortality in rainbow trout and graded egg doses of individual PCDD, PCDF, or PCB congeners.

A legacy of divergent fishery management regimes and the resilience of rainbow and cutthroat trout populations in Lake Crescent, Olympic National Park, Washington

USGS Publications Warehouse

Brenkman, Samuel J.; Duda, Jeffrey J.; Kennedy, Philip R.; Baker, Bruce M.

2014-01-01

As a means to increase visitation, early fisheries management in the National Park Service (NPS) promoted sport harvest and hatchery supplementation. Today, NPS management objectives focus on the preservation of native fish. We summarized management regimes of Olympic National Park's Lake Crescent, which included decades of liberal sport harvest and hatchery releases of 14.3 million salmonids. Notably, nonnative species failed to persist in the lake. Complementary analyses of annual redd counts (1989–2012) and genetics data delineated three sympatric trout (one rainbow; two cutthroat) populations that exhibited distinct spatial and temporal spawning patterns, variable emergence timings, and genetic distinctiveness. Allacustrine rainbow trout spawned in the lake outlet from January to May. Cutthroat trout spawned in the major inlet tributary (Barnes Creek) from February to June and in the outlet river (Lyre) from September to March, an unusual timing for coastal cutthroat trout. Redd counts for each species were initially low (rainbow = mean 89; range 37–159; cutthroat = mean 93; range 18–180), and significantly increased for rainbow trout (mean 306; range 254–352) after implementation of catch-and-release regulations. Rainbow and cutthroat trout reached maximum sizes of 10.4 kg and 5.4 kg, respectively, and are among the largest throughout their native ranges. Morphometric analyses revealed interspecific differences but no intraspecific differences between the two cutthroat populations. Genetic analyses identified three distinct populations and low levels (9–17%) of interspecific hybridization. Lake Crescent rainbow trout were genetically divergent from 24 nearby Oncorhynchus mykiss populations, and represented a unique evolutionary legacy worthy of protection. The indigenous and geographically isolated Lake Crescent trout populations were resilient to overharvest and potential interactions with introduced fish species.

Complete genome sequence of Flavobacterium psychrophilum strain CSF259-93 used to select rainbow trout for increased genetic resistance against bacterial cold water disease

USDA-ARS?s Scientific Manuscript database

The genome sequence of Flavobacterium psychrophilum strain CSF259-93, isolated from rainbow trout (Oncorhynchus mykiss), consists of a single circular genome of 2,900,735 bp and 2,701 predicted open reading frames (ORFs). Strain CSF259-93 has been used to select a line of rainbow trout with increase...

Estimating recruitment dynamics and movement of rainbow trout (Oncorhynchus mykiss) in the Colorado River in Grand Canyon using an integrated assessment model

USGS Publications Warehouse

Korman, Josh; Martell, Steven J.D.; Walters, Carl J.; Makinster, Andrew S.; Coggins, Lewis G.; Yard, Michael D.; Persons, William R.

2012-01-01

We used an integrated assessment model to examine effects of flow from Glen Canyon Dam, Arizona, USA, on recruitment of nonnative rainbow trout (Oncorhynchus mykiss) in the Colorado River and to estimate downstream migration from Glen Canyon to Marble Canyon, a reach used by endangered native fish. Over a 20-year period, recruitment of rainbow trout in Glen Canyon increased with the annual flow volume and when hourly flow variation was reduced and after two of three controlled floods. The model predicted that approximately 16 000 trout·year–1 emigrated to Marble Canyon and that the majority of trout in this reach originate from Glen Canyon. For most models that were examined, over 70% of the variation in emigration rates was explained by variation in recruitment in Glen Canyon, suggesting that flow from the dam controls in large part the extent of potential negative interactions between rainbow trout and native fish. Controlled floods and steadier flows, which were originally aimed at partially restoring conditions before the dam (greater native fish abundance and larger sand bars), appear to have been more beneficial to nonnative rainbow trout than to native fish.

Assessing the potential for rainbow trout reproduction in tributaries of the Mountain Fork River below Broken Bow Dam, southeastern Oklahoma

USGS Publications Warehouse

Long, James M.; Starks, Trevor A.; Farling, Tyler; Bastarache, Robert

2016-01-01

inventory of the resident fish communities in these tributaries is lacking. To address these gaps, we surveyed 10 tributaries, from intermittent through third order, for fishes during presumed spawning periods of rainbow trout; we used backpack electrofishing in February and April 2015 and 2016 to determine the composition of the fish assemblages and whether trout were present. Stocked adult trout were found in three tributaries in 2015; wild juvenile rainbow trout were found in Bee Branch in 2015 and in an intermittent tributary of Spillway Creek, just above the “Cold Hole,” in 2016. Fish assemblages were dominated by highland stonerollers (Campostoma spadiceum) in larger, wider systems and by orangebelly darters (Etheostoma radiosum) in smaller, narrower streams. These data fill an information gap in our understanding of small streams in the Ouachita Mountains, and they demonstrate that some streams are suitable for rainbow trout reproduction.

Interacting effects of water temperature and swimming activity on body composition and mortality of fasted juvenile rainbow trout

USGS Publications Warehouse

Simpkins, D.G.; Hubert, W.A.; Martinez Del Rio, C.; Rule, D.C.

2003-01-01

Abstract: We assessed changes in proximate body composition, wet mass, and the occurrence of mortality among sedentary and actively swimming (15 cm/s) juvenile rainbow trout (Oncorhynchus mykiss) (120-142 mm total length) that were held at 4.0, 7.5, or 15.0 ??C and fasted for 140 days. Warmer water temperatures and swimming activity accentuated declines in lipid mass, but they did not similarly affect lean mass and wet mass. Swimming fish conserved lean mass independent of water temperature. Because lean mass exceeded lipid mass, wet mass was not affected substantially by decreases in lipid mass. Consequently, wet mass did not accurately reflect the effects that water temperature and swimming activity had on mortality of fasted rainbow trout. Rather, lipid mass was more accurate in predicting death from starvation. Juvenile rainbow trout survived long periods without food, and fish that died of starvation appeared to have similar body composition. It appears that the ability of fish to endure periods without food depends on the degree to which lipid mass and lean mass can be utilized as energy sources.

The effects of Glen Canyon Dam operations on early life stages of rainbow trout in the Colorado River

USGS Publications Warehouse

Korman, Josh; Melis, Theodore S.

2011-01-01

The Lees Ferry reach of the Colorado River-a 16-mile segment from Glen Canyon Dam to the confluence with the Paria River-supports an important recreational rainbow trout (Oncorhynchus mykiss) fishery. In Grand Canyon, nonnative rainbow trout prey on and compete for habitat and food with native fish, such as the endangered humpback chub (Gila cypha). Experimental flow fluctuations from the dam during winter and spring 2003-5 dewatered and killed a high proportion of rainbow trout eggs in gravel spawning bars, but this mortality had no measurable effect on the abundance of juvenile fish. Flow fluctuations during summer months reduced growth of juvenile trout relative to steadier flows. A high-flow experiment in March 2008 increased both trout survival rates for early life stages and fish abundance. These findings demonstrate that Glen Canyon Dam operations directly affect the trout population in the Lees Ferry reach and could be used to regulate nonnative fish abundance to limit potential negative effects of trout on native fish in Grand Canyon.

RNA-Seq identifies SNPs associated with muscle yield and quality in rainbow trout

USDA-ARS?s Scientific Manuscript database

Rainbow trout (Oncorhynchus mykiss) is one of the top five sport fish species in North America and the second most widely cultivated fish species for food. Quality attributes of fish flesh are important determinants of profitability for the food fish aquaculture industry. Single nucleotide polymorph...

LAKE HERRING (COREGONUS ARTEDI) AND RAINBOW SMELT (OSMERUS MORDAX) DIETS IN LAKE SUPERIOR

EPA Science Inventory

This manuscript reports on the diets of lake herring and rainbow smelt, currently the two dominant forage fish species (fish that are food for game fishes) in western Lake Superior. Despite the pelagic nature of both these species, they have substantially different diets and henc...

Observations on side-swimming rainbow trout Oncorhynchus mykiss in water recirculation aquaculture systems

USDA-ARS?s Scientific Manuscript database

During a controlled 6-month study using six replicated water recirculation aquaculture systems (WRAS), it was observed that rainbow trout Oncorhynchus mykiss in all WRAS exhibited a higher-than-normal prevalence of side-swimming (i.e. controlled, forward swimming, but with misaligned orientation suc...

IN VIVO MEASUREMENT OF PHENYLGLUCUCURONIDE IN RAINBOW TROUT BY ON-LINE INJECTION MICRODIALYSIS

EPA Science Inventory

Phenylglucuronide (PG) was measured in vivo in arterial blood of rainbow trout using on-line injection microdialysis. A microdialysis probe was surgically implanted in the dorsal aorta of spinally-transected trout. The trout were dosed continuously with PG for 24 h using a ventra...

Transcriptome assembly, gene annotation and tissue gene expression atlas of the rainbow trout

USDA-ARS?s Scientific Manuscript database

Efforts to obtain a comprehensive genome sequence for rainbow trout are ongoing and will be complimented by transcriptome information that will enhance genome assembly and annotation. Previously, we reported a transcriptome reference sequence using a 19X coverage of Sanger and 454-pyrosequencing dat...

Carnosine supplementation to an all-plant protein diet for rainbow trout (Oncorhynchus mykiss).

USDA-ARS?s Scientific Manuscript database

Fishmeal may contain “unknown growth factors” that have yet to be identified for their physiological role. As fishmeal levels in rainbow trout (Oncorhynchus mykiss) feeds are reduced, the dietary loss of these compounds may contribute to growth reductions. One such compound, identified in fishmeal...

Three-Dimensional Seismic Structure of the Mid-Atlantic Ridge: An Investigation of Tectonic, Magmatic, and Hydrothermal Processes in the Rainbow Area

NASA Astrophysics Data System (ADS)

Dunn, Robert A.; Arai, Ryuta; Eason, Deborah E.; Canales, J. Pablo; Sohn, Robert A.

2017-12-01

To test models of tectonic, magmatic, and hydrothermal processes along slow-spreading mid-ocean ridges, we analyzed seismic refraction data from the Mid-Atlantic Ridge INtegrated Experiments at Rainbow (MARINER) seismic and geophysical mapping experiment. Centered at the Rainbow area of the Mid-Atlantic Ridge (36°14'N), this study examines a section of ridge with volcanically active segments and a relatively amagmatic ridge offset that hosts the ultramafic Rainbow massif and its high-temperature hydrothermal vent field. Tomographic images of the crust and upper mantle show segment-scale variations in crustal structure, thickness, and the crust-mantle transition, which forms a vertical gradient rather than a sharp boundary. There is little definitive evidence for large regions of sustained high temperatures and melt in the lower crust or upper mantle along the ridge axes, suggesting that melts rising from the mantle intrude as small intermittent magma bodies at crustal and subcrustal levels. The images reveal large rotated crustal blocks, which extend to mantle depths in some places, corresponding to off-axis normal fault locations. Low velocities cap the Rainbow massif, suggesting an extensive near-surface alteration zone due to low-temperature fluid-rock reactions. Within the interior of the massif, seismic images suggest a mixture of peridotite and gabbroic intrusions, with little serpentinization. Here diffuse microearthquake activity indicates a brittle deformation regime supporting a broad network of cracks. Beneath the Rainbow hydrothermal vent field, fluid circulation is largely driven by the heat of small cooling melt bodies intruded into the base of the massif and channeled by the crack network and shallow faults.

Evaluation of three gears for sampling spawning populations of rainbow trout in a large Alaskan river

USGS Publications Warehouse

Schwanke, C.J.; Hubert, W.A.

2004-01-01

Alternatives to electrofishing are needed for sampling sexually mature rainbow trout Oncorhynchus mykiss during the spawning season in large Alaskan rivers. We compared hook and line, beach seining, and actively fished gill nets as sampling tools. Beach seining and active gill netting yielded similar catch rates, length frequencies, and sex ratios of sexually mature fish. Hook-and-line sampling was less effective, with a lower catch rate and selectivity for immature fish and sexually mature females. We conclude that both beach seining and active gill netting can serve as alternatives to electrofishing for sampling sexually mature rainbow trout stocks during the spawning season in large rivers with stable spring flows and spawning areas with few snags.

Seasonal and spatial patterns of growth of rainbow trout in the Colorado River in Grand Canyon, AZ

USGS Publications Warehouse

Yard, Micheal D.; Korman, Josh; Walters, Carl J.; Kennedy, T.A.

2016-01-01

Rainbow trout (Oncorhynchus mykiss) have been purposely introduced in many regulated rivers, with inadvertent consequences on native fishes. We describe how trout growth rates and condition could be influencing trout population dynamics in a 130 km section of the Colorado River below Glen Canyon Dam based on a large-scale mark–recapture program where ∼8000 rainbow trout were recaptured over a 3-year period (2012–2014). There were strong temporal and spatial variations in growth in both length and weight as predicted from von Bertalanffy and bioenergetic models, respectively. There was more evidence for seasonal variation in the growth coefficient and annual variation in the asymptotic length. Bioenergetic models showed more variability for growth in weight across seasons and years than across reaches. These patterns were consistent with strong seasonal variation in invertebrate drift and effects of turbidity on foraging efficiency. Highest growth rates and relative condition occurred in downstream reaches with lower trout densities. Results indicate that reduction in rainbow trout abundance in Glen Canyon will likely increase trout size in the tailwater fishery and may reduce downstream dispersal into Grand Canyon.

Acute sensitivity of white sturgeon (Acipenser transmontanus) and rainbow trout (Oncorhynchus mykiss) to copper, cadmium, or zinc in water-only laboratory exposures

USGS Publications Warehouse

Calfee, Robin D.; Little, Edward E.; Puglis, Holly J.; Scott, Erinn L.; Brumbaugh, William G.; Mebane, Christopher A.

2014-01-01

The acute toxicity of cadmium, copper, and zinc to white sturgeon (Acipenser transmontanus) and rainbow trout (Oncorhynchus mykiss) were determined for 7 developmental life stages in flow-through water-only exposures. Metal toxicity varied by species and by life stage. Rainbow trout were more sensitive to cadmium than white sturgeon across all life stages, with median effect concentrations (hardness-normalized EC50s) ranging from 1.47 µg Cd/L to 2.62 µg Cd/L with sensitivity remaining consistent during later stages of development. Rainbow trout at 46 d posthatch (dph) ranked at the 2nd percentile of a compiled database for Cd species sensitivity distribution with an EC50 of 1.46 µg Cd/L and 72 dph sturgeon ranked at the 19th percentile (EC50 of 3.02 µg Cd/L). White sturgeon were more sensitive to copper than rainbow trout in 5 of the 7 life stages tested with biotic ligand model (BLM)-normalized EC50s ranging from 1.51 µg Cu/L to 21.9 µg Cu/L. In turn, rainbow trout at 74 dph and 95 dph were more sensitive to copper than white sturgeon at 72 dph and 89 dph, indicating sturgeon become more tolerant in older life stages, whereas older trout become more sensitive to copper exposure. White sturgeon at 2 dph, 16 dph, and 30 dph ranked in the lower percentiles of a compiled database for copper species sensitivity distribution, ranking at the 3rd (2 dph), 5th (16 dph), and 10th (30 dph) percentiles. White sturgeon were more sensitive to zinc than rainbow trout for 1 out of 7 life stages tested (2 dph with an biotic ligand model–normalized EC50 of 209 µg Zn/L) and ranked in the 1st percentile of a compiled database for zinc species sensitivity distribution.

Discovery of genes implicated in whirling disease infection and resistance in rainbow trout using genome-wide expression profiling

PubMed Central

Baerwald, Melinda R; Welsh, Amy B; Hedrick, Ronald P; May, Bernie

2008-01-01

Background Whirling disease, caused by the pathogen Myxobolus cerebralis, afflicts several salmonid species. Rainbow trout are particularly susceptible and may suffer high mortality rates. The disease is persistent and spreading in hatcheries and natural waters of several countries, including the U.S.A., and the economic losses attributed to whirling disease are substantial. In this study, genome-wide expression profiling using cDNA microarrays was conducted for resistant Hofer and susceptible Trout Lodge rainbow trout strains following pathogen exposure with the primary objective of identifying specific genes implicated in whirling disease resistance. Results Several genes were significantly up-regulated in skin following pathogen exposure for both the resistant and susceptible rainbow trout strains. For both strains, response to infection appears to be linked with the interferon system. Expression profiles for three genes identified with microarrays were confirmed with qRT-PCR. Ubiquitin-like protein 1 was up-regulated over 100 fold and interferon regulating factor 1 was up-regulated over 15 fold following pathogen exposure for both strains. Expression of metallothionein B, which has known roles in inflammation and immune response, was up-regulated over 5 fold in the resistant Hofer strain but was unchanged in the susceptible Trout Lodge strain following pathogen exposure. Conclusion The present study has provided an initial view into the genetic basis underlying immune response and resistance of rainbow trout to the whirling disease parasite. The identified genes have allowed us to gain insight into the molecular mechanisms implicated in salmonid immune response and resistance to whirling disease infection. PMID:18218127

Anchor and visible implant elastomer tag retention by hatchery rainbow trout stocked into an Ozark stream

USGS Publications Warehouse

Walsh, M.G.; Winkelman, D.L.

2004-01-01

As part of a study to evaluate the stocking of rainbow trout Oncorhynchus mykiss in an Oklahoma Ozark stream, we tagged 2,542 hatchery-reared rainbow trout (123-366 mm total length) with individually numbered Floy FD-68B anchor tags and visible implant fluorescent elastomer (VIE) tags. We experimentally stocked double-marked rainbow trout into a small northeastern Oklahoma stream from November 2001 to March 2002 and resampled them monthly from December 2001 to October 2002 by electrofishing. Anchor tag retention was 91% through 6 months, and VIE tag retention was 96% through 6 months despite extensive handling of fish within 24 h of tagging. Based on the ease of application, high visibility, and high retention observed in this study, we recommend the use of VIE tags as a batch mark in similarly sized, similarly pigmented fish. The retention of VIE tags was slightly higher than that of anchor tags, and cost per fish was less for VIE than for anchor tags. However, VIE tags would have limited utility if numerous individual tags are necessary; therefore, we recommend anchor tags as individual marks in similarly sized salmonids. Retention for both tag types was relatively high and could be corrected for when estimating population parameters from tagging data.

Hybridization and cytonuclear associations among native westslope cutthroat trout, introduced rainbow trout, and their hybrids within the Stehekin River drainage, North Cascades National Park

USGS Publications Warehouse

Ostberg, C.O.; Rodriguez, R.J.

2006-01-01

Historic introductions of nonnative rainbow trout Oncorhynchus mykiss into the native habitats of cutthroat trout O. clarkii have impacted cutthroat trout populations through introgressive hybridization, creating challenges and concerns for cutthroat trout conservation. We examined the effects of rainbow trout introductions on the native westslope cutthroat trout O. c. lewisii within the Stehekin River drainage, North Cascades National Park, Washington, by analyzing 1,763 salmonid DNA samples from 18 locations with nine diagnostic nuclear DNA markers and one diagnostic mitochondrial DNA (mtDNA) marker. Pure westslope cutthroat trout populations only occurred above upstream migration barriers in the Stehekin River and Park Creek. Two categories of rainbow trout admixture were observed: (1) less than 10% within the Stehekin River drainage above the Bridge Creek confluence and the middle and upper Bridge Creek drainage and (2) greater than 30% within the Stehekin River below the Bridge Creek confluence and in lower Bridge Creek. Hybrid indices and multilocus genotypes revealed an absence of rainbow trout and reduced hybrid diversity within the Stehekin River above the Bridge Creek confluence relative to hybrid diversity in the Stehekin River below the confluence and within lower Bridge Creek. Cytonuclear disequilibrium statistics revealed assortative mating between westslope cutthroat and rainbow trout but not among hybrids within the same locations. This suggests that a randomly mating hybrid swarm does not currently exist. However, continual migration of parental genotypes into the study location could also create significant cytonuclear disequilibria. The Stehekin River represents a novel and unique example of a dynamic hybridization zone where the invasion of rainbow trout alleles into the Stehekin River westslope cutthroat trout population above the Bridge Creek confluence appears to be impeded, suggesting that divergent ecological or evolutionary mechanisms

Growth enhancement of rainbow trout (Oncorhynchus mykiss) by passive immunisation against somatostatin-14

USDA-ARS?s Scientific Manuscript database

Juvenile rainbow trout (Oncorhynchus mykiss) were passively immunised against somatostatin-14 (SS-14) using an antibody originating from egg laying chicken (Gallus domesticus). Fish were immunised weekly (0, 7, 14, 21, 28, 35 d) with chicken egg yolk derived immunoglobulin (IgY) against SS-14 (1:25 ...

New in-depth rainbow trout transcriptome reference and digital atlas of gene expression

USDA-ARS?s Scientific Manuscript database

Sequencing the rainbow trout genome is underway and a transcriptome reference sequence is required to help in genome assembly and gene discovery. Previously, we reported a transcriptome reference sequence using a 19X coverage of 454-pyrosequencing data. Although this work added a great wealth of ann...

Schlieren optical visualization for transient EHD induced flow in a stratified dielectric liquid under gas-phase ac corona discharges

NASA Astrophysics Data System (ADS)

Ohyama, R.; Inoue, K.; Chang, J. S.

2007-01-01

A flow pattern characterization of electrohydrodynamically (EHD) induced flow phenomena of a stratified dielectric fluid situated in an ac corona discharge field is conducted by a Schlieren optical system. A high voltage application to a needle-plate electrode arrangement in gas-phase normally initiates a conductive type EHD gas flow. Although the EHD gas flow motion initiated from the corona discharge electrode has been well known as corona wind, no comprehensive study has been conducted for an EHD fluid flow motion of the stratified dielectric liquid that is exposed to the gas-phase ac corona discharge. The experimentally observed result clearly presents the liquid-phase EHD flow phenomenon induced from the gas-phase EHD flow via an interfacial momentum transfer. The flow phenomenon is also discussed in terms of the gas-phase EHD number under the reduced gas pressure (reduced interfacial momentum transfer) conditions.

Realists, Radicals, and Rainbows. The Twenty-Eighth Amy Morris Homans Lecture 1994.

ERIC Educational Resources Information Center

Bennett, Roberta S.

1995-01-01

Challenges physical education professionals to be realists who name the conditions around them that divide according to group identity and thus perpetuate injustice; to be radicals who work to change conditions; and to build and follow a rainbow path to a future where social justice, human rights, and the human condition are first priorities. (JB)

Characterization of rainbow trout (Oncorhynchus mykiss) spleen transcriptome and identification of immune-related genes

USDA-ARS?s Scientific Manuscript database

Resistance against specific diseases is affecting profitability in fish production systems including rainbow trout. Limited information is known about functions and mechanisms of the immune gene pathways in teleosts. Immunogenomics are powerful tools to determine immune-related genes/gene pathways a...

Effects of incubation temperatures on embryonic and larval survival in rainbow trout, Oncorhynchus mykiss

USDA-ARS?s Scientific Manuscript database

Incubation temperature is commonly used by hatcheries to manipulate hatch date in salmonids including rainbow trout (Oncorhynchus mykiss). Target dates for hatching often change during the incubation period and require a sudden adjustment in temperature. Although there are many studies charac...

Apparent Amino Acid Availability from Feedstuffs in Extruded Diets for Rainbow Trout Oncorhynchus mykiss.

USDA-ARS?s Scientific Manuscript database

Apparent amino acid availability coefficients of several typical and novel feed ingredients were determined in rainbow trout using extruded diets and the fecal stripping technique. The ingredients tested included five fish meals, three terrestrial animal by products, five plant protein concentrates...

Effect of rainbow trout size on response to rotenone and antimycin

USGS Publications Warehouse

Brown, Peter J.; Johnson, Heather; Zale, Alexander V.

2011-01-01

The piscicides rotenone and antimycin are commonly used to eradicate unwanted fish populations. However, the relationships (if present) between their toxicities and fish sizes are unknown and could be especially important when bioassay fish are used to detect piscicide presence and effectiveness. Size-mediated toxicity could lead to either excessive or inadequate piscicide applications if bioassay fish are larger or smaller than the fish being eradicated. The relationships between time to death and weight of rainbow trout Oncorhynchus mykiss (0.7–574.0 g) at an antimycin concentration of 7.5 μg/L and a rotenone concentration of 12.5 μg/L were determined. Antimycin took significantly longer than rotenone to kill rainbow trout at concentrations typically used in eradication projects. Significant positive relationships existed between fish size and time to death for rotenone and antimycin exposures and were probably caused by size-mediated differences in metabolic rate; however, these relationships accounted for less than 21% of the variation in time to death. Smaller fish appeared to be affected by the chemicals more quickly, but their deaths did not consistently occur before the deaths of larger fish.

Should I stay or should I go? Understanding the shapeshifting rainbow trout/steelhead

Treesearch

Geoff Koch; Gordon Reeves

2015-01-01

Steelhead are the sea-going form of Oncorhynchus mykiss. Rainbow trout,also O. mykiss, remain in freshwater. Each form, or life-history, can produce offspring of the other, but the mechanism for this and potential effects that climate change may have on the species are poorly understood.Forest...

Investigation of Creep Properties in RAINBOW High Displacement Actuators

NASA Technical Reports Server (NTRS)

Haertling, Gene; Furman, Eugene; Li, Guang; Barron, Bret; Moon, Youngwoo

1997-01-01

Results from this study on fatigue in Rainbow and Cerambow actuators show that these high displacement actuators have definite fatigue rates and lifetimes depending upon (1) the amount of displacement generated, (2) how hard they are driven electrically, and (3) the microstructure (grain size) of the ceramic material. Lifetimes for some actuators were on the order of 10(exp 7) cycles at near dc (1 Hz) frequencies while others still retained up to 74% of their displacement at 2.1 x 10(exp 7) Hz.

Identification, characterization and genetic mapping of TLR1 loci in rainbow trout (Oncorhynchus mykiss)

USGS Publications Warehouse

Palti, Y.; Rodriguez, M.F.; Gahr, S.A.; Purcell, M.K.; Rexroad, C. E.; Wiens, G.D.

2010-01-01

Induction of innate immune pathways is critical for early anti-microbial defense but there is limited understanding of how teleosts recognize microbial molecules and activate these pathways. In mammals, Toll-like receptors (TLR) 1 and 2 form a heterodimer involved in recognizing peptidoglycans and lipoproteins of microbial origin. Herein, we identify and describe the rainbow trout (Oncorhynchus mykiss) TLR1 gene ortholog and its mRNA expression. Two TLR1 loci were identified from a rainbow trout bacterial artificial chromosome (BAC) library using DNA sequencing and genetic linkage analyses. Full length cDNA clone and direct sequencing of four BACs revealed an intact omTLR1 open reading frame (ORF) located on chromosome 14 and a second locus on chromosome 25 that contains a TLR1 pseudogene. The duplicated trout loci exhibit conserved synteny with other fish genomes that extends beyond the TLR1 gene sequences. The omTLR1 gene includes a single large coding exon similar to all other described TLR1 genes, but unlike other teleosts it also has a 5??? UTR exon and intron preceding the large coding exon. The omTLR1 ORF is predicted to encode an 808 amino-acid protein with 69% similarity to the Fugu TLR1 and a conserved pattern of predicted leucine-rich repeats (LRR). Phylogenetic analysis grouped omTLR1 with other fish TLR1 genes on a separate branch from the avian TLR1 and mammalian TLR1, 6 and 10. omTLR1 expression levels in rainbow trout anterior kidney leukocytes were not affected by the human TLR2/6 and TLR2/1 agonists diacylated lipoprotein (Pam2CSK4) and triacylated lipoprotein (Pam3CSK4). However, due to the lack of TLR6 and 10 genes in teleost genomes and up-regulation of TLR1 mRNA in response to LPS and bacterial infection in other fish species we hypothesize an important role for omTLR1 in anti-microbial immunity. Therefore, the identification of a TLR2 ortholog in rainbow trout and the development of assays to measure ligand binding and downstream signaling

Identification, characterization and genetic mapping of TLR1 loci in rainbow trout (Oncorhynchus mykiss)

USGS Publications Warehouse

Palti, Yniv; Rodriguez, M. Fernanda; Gahr, Scott A.; Purcell, Maureen K.; Rexroad, Caird E.; Wiens, Gregory D.

2010-01-01

Induction of innate immune pathways is critical for early anti-microbial defense but there is limited understanding of how teleosts recognize microbial molecules and activate these pathways. In mammals, Toll-like receptors (TLR) 1 and 2 form a heterodimer involved in recognizing peptidoglycans and lipoproteins of microbial origin. Herein, we identify and describe the rainbow trout (Oncorhynchus mykiss) TLR1 gene ortholog and its mRNA expression. Two TLR1 loci were identified from a rainbow trout bacterial artificial chromosome (BAC) library using DNA sequencing and genetic linkage analyses. Full length cDNA clone and direct sequencing of four BACs revealed an intact omTLR1 open reading frame (ORF) located on chromosome 14 and a second locus on chromosome 25 that contains a TLR1 pseudogene. The duplicated trout loci exhibit conserved synteny with other fish genomes that extends beyond the TLR1 gene sequences. The omTLR1 gene includes a single large coding exon similar to all other described TLR1 genes, but unlike other teleosts it also has a 5' UTR exon and intron preceding the large coding exon. The omTLR1 ORF is predicted to encode an 808 amino-acid protein with 69% similarity to the Fugu TLR1 and a conserved pattern of predicted leucine-rich repeats (LRR). Phylogenetic analysis grouped omTLR1 with other fish TLR1 genes on a separate branch from the avian TLR1 and mammalian TLR1, 6 and 10. omTLR1 expression levels in rainbow trout anterior kidney leukocytes were not affected by the human TLR2/6 and TLR2/1 agonists diacylated lipoprotein (Pam2CSK4) and triacylated lipoprotein (Pam3CSK4). However, due to the lack of TLR6 and 10 genes in teleost genomes and up-regulation of TLR1 mRNA in response to LPS and bacterial infection in other fish species we hypothesize an important role for omTLR1 in anti-microbial immunity. Therefore, the identification of a TLR2 ortholog in rainbow trout and the development of assays to measure ligand binding and downstream signaling are

A New Single Nucleotide Polymorphism Database for Rainbow Trout Generated Through Whole Genome Resequencing.

PubMed

Gao, Guangtu; Nome, Torfinn; Pearse, Devon E; Moen, Thomas; Naish, Kerry A; Thorgaard, Gary H; Lien, Sigbjørn; Palti, Yniv

2018-01-01

Single-nucleotide polymorphisms (SNPs) are highly abundant markers, which are broadly distributed in animal genomes. For rainbow trout ( Oncorhynchus mykiss ), SNP discovery has been previously done through sequencing of restriction-site associated DNA (RAD) libraries, reduced representation libraries (RRL) and RNA sequencing. Recently we have performed high coverage whole genome resequencing with 61 unrelated samples, representing a wide range of rainbow trout and steelhead populations, with 49 new samples added to 12 aquaculture samples from AquaGen (Norway) that we previously used for SNP discovery. Of the 49 new samples, 11 were double-haploid lines from Washington State University (WSU) and 38 represented wild and hatchery populations from a wide range of geographic distribution and with divergent migratory phenotypes. We then mapped the sequences to the new rainbow trout reference genome assembly (GCA_002163495.1) which is based on the Swanson YY doubled haploid line. Variant calling was conducted with FreeBayes and SAMtools mpileup , followed by filtering of SNPs based on quality score, sequence complexity, read depth on the locus, and number of genotyped samples. Results from the two variant calling programs were compared and genotypes of the double haploid samples were used for detecting and filtering putative paralogous sequence variants (PSVs) and multi-sequence variants (MSVs). Overall, 30,302,087 SNPs were identified on the rainbow trout genome 29 chromosomes and 1,139,018 on unplaced scaffolds, with 4,042,723 SNPs having high minor allele frequency (MAF > 0.25). The average SNP density on the chromosomes was one SNP per 64 bp, or 15.6 SNPs per 1 kb. Results from the phylogenetic analysis that we conducted indicate that the SNP markers contain enough population-specific polymorphisms for recovering population relationships despite the small sample size used. Intra-Population polymorphism assessment revealed high level of polymorphism and heterozygosity

The effects of exogenous cortisol on myostatin transcription in rainbow trout, Oncorhynchus mykiss.

PubMed

Galt, Nicholas J; Froehlich, Jacob Michael; Remily, Ethan A; Romero, Sinibaldo R; Biga, Peggy R

2014-09-01

Glucocorticoids (GCs) strongly regulate myostatin expression in mammals via glucocorticoid response elements (GREs), and bioinformatics methods suggest that this regulatory mechanism is conserved among many vertebrates. However, the multiple myostatin genes found in some fishes may be an exception. In silico promoter analyses of the three putative rainbow trout (Oncorhynchus mykiss) myostatin promoters have failed to identify putative GREs, suggesting a divergence in myostatin function. Therefore, we hypothesized that myostatin mRNA expression is not regulated by glucocorticoids in rainbow trout. In this study, both juvenile rainbow trout and primary trout myoblasts were treated with cortisol to examine the effects on myostatin mRNA expression. Results suggest that exogenous cortisol does not regulate myostatin-1a and -1b expression in vivo, as myostatin mRNA levels were not significantly affected by cortisol treatment in either red or white muscle tissue. In red muscle, myostatin-2a levels were significantly elevated in the cortisol treatment group relative to the control, but not the vehicle control, at both 12 h and 24 h post-injection. As such, it is unclear if cortisol was acting alone or in combination with the vehicle. Cortisol increased myostatin-1b expression in a dose-dependent manner in vitro. Further work is needed to determine if this response is the direct result of cortisol acting on the myostatin-1b promoter or through an alternative mechanism. These results suggest that regulation of myostatin by cortisol may not be as highly conserved as previously thought and support previous work that describes potential functional divergence of the multiple myostatin genes in fishes. Copyright © 2014 Elsevier Inc. All rights reserved.

Hybridization between Yellowstone cutthroat trout and rainbow trout alters the expression of muscle growth-related genes and their relationships with growth patterns

USGS Publications Warehouse

Ostberg, Carl O.; Chase, Dorothy M.; Hauser, Lorenz

2015-01-01

Hybridization creates novel gene combinations that may generate important evolutionary novelty, but may also reduce existing adaptation by interrupting inherent biological processes, such as genotype-environment interactions. Hybridization often causes substantial change in patterns of gene expression, which, in turn, may cause phenotypic change. Rainbow trout (Oncorhynchus mykiss) and cutthroat trout (O. clarkii) produce viable hybrids in the wild, and introgressive hybridization with introduced rainbow trout is a major conservation concern for native cutthroat trout. The two species differ in body shape, which is likely an evolutionary adaptation to their native environments, and their hybrids tend to show intermediate morphology. The characterization of gene expression patterns may provide insights on the genetic basis of hybrid and parental morphologies, as well as on the ecological performance of hybrids in the wild. Here, we evaluated the expression of eight growth-related genes (MSTN-1a, MSTN-1b, MyoD1a, MyoD1b, MRF-4, IGF-1, IGF-2, and CAST-L) and the relationship of these genes with growth traits (length, weight, and condition factor) in six line crosses: both parental species, both reciprocal F1 hybrids, and both first-generation backcrosses (F1 x rainbow trout and F1 x cutthroat trout). Four of these genes were differentially expressed among rainbow, cutthroat, and their hybrids. Transcript abundance was significantly correlated with growth traits across the parent species, but not across hybrids. Our findings suggest that rainbow and cutthroat trout exhibit differences in muscle growth regulation, that transcriptional networks may be modified by hybridization, and that hybridization disrupts intrinsic relationships between gene expression and growth patterns that may be functionally important for phenotypic adaptations.

Assessment of metabolic stability using the rainbow trout (Oncorhynchus mykiss) liver S9 fraction

EPA Science Inventory

Standard protocols are given for assessing metabolic stability in rainbow trout using the liver S9 fraction. These protocols describe the isolation of S9 fractions from trout livers, evaluation of metabolic stability using a substrate depletion approach, and expression of the res...

Cloning and characterization of transferrin cDNA and rapid detection of transferrin gene polymorphism in rainbow trout (Oncorhynchus mykiss).

PubMed

Tange, N; Jong-Young, L; Mikawa, N; Hirono, I; Aoki, T

1997-12-01

A cDNA clone of rainbow trout (Oncorhynchus mykiss) transferrin was obtained from a liver cDNA library. The 2537-bp cDNA sequence contained an open reading frame encoding 691 amino acids and the 5' and 3' noncoding regions. The amino acid sequences at the iron-binding sites and the two N-linked glycosylation sites, and the cysteine residues were consistent with known, conserved vertebrate transferrin cDNA sequences. Single N-linked glycosylation sites existed on the N- and C-lobe. The deduced amino acid sequence of the rainbow trout transferrin cDNA had 92.9% identities with transferrin of coho salmon (Oncorhynchus kisutch); 85%, Atlantic salmon (Salmo salar); 67.3%, medaka (Oryzias latipes); 61.3% Atlantic cod (Gadus morhua); and 59.7%, Japanese flounder (Paralichthys olivaceus). The long and accurate polymerase chain reaction (LA-PCR) was used to amplify approximately 6.5 kb of the transferrin gene from rainbow trout genomic DNA. Restriction fragment length polymorphisms (RFLPs) of the LA-PCR products revealed three digestion patterns in 22 samples.

Effect of short-term decrease in water temperature on body temperature and involvement of testosterone in steelhead and rainbow trout, Oncorhynchus mykiss.

PubMed

Miura, Go; Munakata, Arimune; Yada, Takashi; Schreck, Carl B; Noakes, David L G; Matsuda, Hiroyuki

2013-09-01

The Pacific salmonid species Oncorhynchus mykiss is separated into a migratory form (steelhead trout) and a non-migratory form (rainbow trout). A decrease in water temperature is likely a cue triggering downstream behavior in the migratory form, and testosterone inhibits onset of this behavior. To elucidate differences in sensitivity to water temperature decreases between the migratory and non-migratory forms and effect of testosterone on the sensitivity, we examined two experiments. In experiment 1, we compared changes in body temperature during a short-term decrease in water temperature between both live and dead steelhead and rainbow trout. In experiment 2, we investigated effects of testosterone on body temperature decrease in steelhead trout. Water temperature was decreased by 3°C in 30min. The body temperature of the steelhead decreased faster than that of the rainbow trout. In contrast, there was no significant difference in the decrease in body temperature between dead steelhead and rainbow trout specimens. The body temperature of the testosterone-treated steelhead trout decreased more slowly than that of control fish. Our results suggest that the migratory form is more sensitive to decreases in water temperature than the non-migratory form. Moreover, testosterone might play an inhibitory role in sensitivity to such decreases. Copyright © 2013 Elsevier Inc. All rights reserved.

Classical And Quantum Rainbow Scattering From Surfaces

DOE Office of Scientific and Technical Information (OSTI.GOV)

Winter, H.; Schueller, A.; Busch, M.

2011-06-01

The structure of clean and adsorbate covered surfaces as well as of ultrathin films can be investigated by grazing scattering of fast atoms. We present two recent experimental techniques which allow one to study the structure of ordered arrangements of surface atoms in detail. (1) Rainbow scattering under axial surface channeling conditions, and (2) fast atom diffraction. Our examples demonstrate the attractive features of grazing fast atom scattering as a powerful analytical tool in studies on the structure of surfaces. We will concentrate our discussion on the structure of ultrathin silica films on a Mo(112) surface and of adsorbed oxygenmore » atoms on a Fe(110) surface.« less

Long-term trends in naturalized rainbow trout (Oncorhynchus mykiss) populations in the upper Esopus Creek, Ulster County, New York, 2009–15

USGS Publications Warehouse

George, Scott D.; Baldigo, Barry P.

2016-05-13

The U.S. Geological Survey, in cooperation with Cornell Cooperative Extension of Ulster County, New York State Energy Research and Development Authority, the New York State Department of Environmental Conservation, and the New York City Department of Environmental Protection, surveyed fish communities annually on the main stem and tributaries of the upper Esopus Creek, Ulster County, New York, from 2009 to 2015. This report summarizes the density, biomass, and size structure of rainbow trout (Oncorhynchus mykiss) and brown trout (Salmo trutta) populations from the 2015 surveys along with data from the preceding 6 years. The mean density of rainbow trout populations in 2015 was 98 fish per 0.1 hectare, which was the highest value observed since 2010, and the mean biomass of rainbow trout populations in 2015 was 864 grams per 0.1 hectare, which was the highest value observed since 2012.

On the fundamental relation of laser schlieren deflectometry for temperature measurements in filamentary plasmas

NASA Astrophysics Data System (ADS)

Schäfer, Jan; Bonaventura, Zdeněk; Foest, Rüdiger

2015-07-01

Recently, laser schlieren deflectometry (LSD) had been successfully employed as a temperature measurement method to reveal the heat convection generated by micro filaments of a self-organized non-thermal atmospheric plasma jet. Based on the theory of the temperature measurements using LSD, in this work, three approaches for an application of the method are introduced: (i) a hyperbolic-like model of refractive index is applied which allows an analytical theory for the evaluation of the deflection angle to be developed, (ii) a Gaussian shape model for the filament temperature is implemented which is analyzed numerically and (iii) an experimental calibration of the laser deflection with a gas mixture of helium and argon is performed. Thus, these approaches demonstrate that a universal relation between the relative maximum temperature of the filament core (T1/T0) and a the maximum deflection angle δ1 of the laser beam can be written as T1/T0=(1 - δ1/δ0)-1, where δ0 is a parameter that is defined by the configuration of the experiment and by the assumed model for the shape of the temperature profile. Contribution to the topical issue "The 14th International Symposium on High Pressure Low Temperature Plasma Chemistry (HAKONE XIV)", edited by Nicolas Gherardi, Ronny Brandenburg and Lars Stollenwark

Non-stationary recruitment dynamics of rainbow smelt: the influence of environmental variables and variation in size structure and length-at-maturation

USGS Publications Warehouse

Feiner, Zachary S.; Bunnell, David B.; Hook, Tomas O.; Madenjian, Charles P.; Warner, David M.; Collingsworth, Paris D.

2015-01-01

Fish stock-recruitment dynamics may be difficult to elucidate because of nonstationary relationships resulting from shifting environmental conditions and fluctuations in important vital rates such as individual growth or maturation. The Great Lakes have experienced environmental stressors that may have changed population demographics and stock-recruitment relationships while causing the declines of several prey fish species, including rainbow smelt (Osmerus mordax). We investigated changes in the size and maturation of rainbow smelt in Lake Michigan and Lake Huron and recruitment dynamics of the Lake Michigan stock over the past four decades. Mean lengths and length-at-maturation of rainbow smelt generally declined over time in both lakes. To evaluate recruitment, we used both a Ricker model and a Kalman filter-random walk (KF-RW) model which incorporated nonstationarity in stock productivity by allowing the productivity term to vary over time. The KF-RW model explained nearly four times more variation in recruitment than the Ricker model, indicating the productivity of the Lake Michigan stock has increased. By accounting for this nonstationarity, we were able identify significant variations in stock productivity, evaluate its importance to rainbow smelt recruitment, and speculate on potential environmental causes for the shift. Our results suggest that investigating mechanisms driving nonstationary shifts in stock-recruit relationships can provide valuable insights into temporal variation in fish population dynamics.

Concentration Measurements in Self-Excited Momentum Dominated Low-Density Gas Jets

NASA Technical Reports Server (NTRS)

Yildirim, B. S.; Pasumarthi, K. S.; Agrawal, A. K.

2004-01-01

Flow structure of self-excited, laminar, axisymmetric, momentum-dominated helium jets discharged vertically into ambient air was investigated using high-speed rainbow schlieren deflectometry technique. Measurements were obtained at temporal resolution of 1 ms and spatial resolution of 0.19 mm for two test cases with Richardson number of 0.034 and 0.018. Power spectra revealed that the oscillation frequency was independent of spatial coordinates, suggesting global oscillations in the flow. Abel inversion algorithm was used to reconstruct the concentration field of helium. Instantaneous concentration contours revealed changes in the flow field and evolution of vortical structures during an oscillation cycle. Temporal evolution plots of helium concentration at different axial locations provided detailed information about the instability in the flow field.

Aneuploid sperm formation in rainbow trout exposed to the environmental estrogen 17α-ethynylestradiol

PubMed Central

Brown, Kim H.; Schultz, Irvin R.; Cloud, J. G.; Nagler, James J.

2008-01-01

Environmental contaminants that mimic native estrogens (i.e., environmental estrogens) are known to significantly impact a wide range of vertebrate species and have been implicated as a source for increasing human male reproductive deficiencies and diseases. Despite the widespread occurrence of environmental estrogens and recognized detrimental effects on male vertebrate reproduction, no specific mechanism has been determined indicating how reduced fertility and/or fecundity is achieved. Previous studies show that male rainbow trout, Oncorhynchus mykiss, exposed to the environmental estrogen 17α-ethynylestradiol (EE2) before gamete formation and fertilization produce progeny with significantly reduced embryonic survival. To determine whether this observed decrease results from sperm chromosome alterations during spermatogenesis, male rainbow trout were exposed to 10 ng of EE2/l for 50 days. After exposure, semen was collected and sperm aneuploidy levels analyzed with two chromosome markers by fluorescent in situ hybridization. In vitro fertilizations were also conducted by using control and exposed sperm crossed to eggs from an unexposed female for offspring analysis. Evaluations for nucleolar organizer region number and karyotype were performed on developing embryos to determine whether sperm aneuploidy translated into embryonic aneuploidy. Results conclusively show increased aneuploid sperm formation due to EE2 exposure. Additionally, embryonic cells from propagated progeny of individuals possessing elevated sperm aneuploidy display high levels of embryonic aneuploidy. This study concludes that EE2 exposure in sexually developing male rainbow trout increases levels of aneuploid sperm, providing a mechanism for decreased embryonic survival and ultimately diminished reproductive success in EE2 exposed males. PMID:19066213

Variability of kokanee and rainbow trout food habits, distribution, and population dynamics, in an ultraoligotrophic lake with no manipulative management

USGS Publications Warehouse

Buktenica, M.W.; Girdner, S.F.; Larson, G.L.; McIntire, C.D.

2007-01-01

Crater Lake is a unique environment to evaluate the ecology of introduced kokanee and rainbow trout because of its otherwise pristine state, low productivity, absence of manipulative management, and lack of lotic systems for fish spawning. Between 1986 and 2004, kokanee displayed a great deal of variation in population demographics with a pattern that reoccurred in about 10 years. We believe that the reoccurring pattern resulted from density dependent growth, and associated changes in reproduction and abundance, driven by prey resource limitation that resulted from low lake productivity exacerbated by prey consumption when kokanee were abundant. Kokanee fed primarily on small-bodied prey from the mid-water column; whereas rainbow trout fed on large-bodied prey from the benthos and lake surface. Cladoceran zooplankton abundance may be regulated by kokanee. And kokanee growth and reproductive success may be influenced by the availability of Daphnia pulicaria, which was absent in zooplankton samples collected annually from 1990 to 1995, and after 1999. Distribution and diel migration of kokanee varied over the duration of the study and appeared to be most closely associated with prey availability, maximization of bioenergetic efficiency, and fish density. Rainbow trout were less abundant than were kokanee and exhibited less variation in population demographics, distribution, and food habits. There is some evidence that the population dynamics of rainbow trout were in-part related to the availability of kokanee as prey. ?? 2007 Springer Science+Business Media B.V.

Effects of water temperature and fish size on predation vulnerability of juvenile humpback chub to rainbow trout and brown trout

USGS Publications Warehouse

Ward, David L.; Morton-Starner, Rylan

2015-01-01

Predation on juvenile native fish by introduced Rainbow Trout and Brown Trout is considered a significant threat to the persistence of endangered Humpback Chub Gila cypha in the Colorado River in the Grand Canyon. Diet studies of Rainbow Trout and Brown Trout in Glen and Grand canyons indicate that these species do eat native fish, but impacts are difficult to assess because predation vulnerability is highly variable, depending on prey size, predator size, and the water temperatures under which the predation interactions take place. We conducted laboratory experiments to evaluate how short-term predation vulnerability of juvenile native fish changes in response to fish size and water temperature using captivity-reared Humpback Chub, Bonytail, and Roundtail Chub. Juvenile chub 45–90 mm total length (TL) were exposed to adult Rainbow and Brown trouts at 10, 15, and 20°C to measure predation vulnerability as a function of water temperature and fish size. A 1°C increase in water temperature decreased short-term predation vulnerability of Humpback Chub to Rainbow Trout by about 5%, although the relationship is not linear. Brown Trout were highly piscivorous in the laboratory at any size > 220 mm TL and at all water temperatures we tested. Understanding the effects of predation by trout on endangered Humpback Chub is critical in evaluating management options aimed at preserving native fishes in Grand Canyon National Park.

Infectious pancreatic necrosis virus triggers antiviral immune response in rainbow trout red blood cells, despite not being infective

PubMed Central

Nombela, Ivan; Carrion, Aurora; Puente-Marin, Sara; Chico, Verónica; Mercado, Luis; Perez, Luis; Coll, Julio; Ortega-Villaizan, Maria del Mar

2017-01-01

Background: Some fish viruses, such as piscine orthoreovirus and infectious salmon anemia virus, target red blood cells (RBCs), replicate inside them and induce an immune response. However, the roles of RBCs in the context of infectious pancreatic necrosis virus (IPNV) infection  have not been studied yet. Methods: Ex vivo rainbow trout RBCs were obtained from peripheral blood, Ficoll purified and exposed to IPNV in order to analyze infectivity and immune response using RT-qPCR, immune fluorescence imaging, flow cytometry and western-blotting techniques. Results: IPNV could not infect RBCs; however, IPNV increased the expression of the INF1-related genes ifn-1, pkr and mx genes. Moreover, conditioned media from IPNV-exposed RBCs conferred protection against IPNV infection in CHSE-214 fish cell line. Conclusions: Despite not being infected, rainbow trout RBCs could respond to IPNV with increased expression of antiviral genes. Fish RBCs could be considered as mediators of the antiviral response and therefore targets of new strategies against fish viral infections. Further research is ongoing to completely understand the molecular mechanism that triggers this antiviral response in rainbow trout RBCs. PMID:29333244

Infectious pancreatic necrosis virus triggers antiviral immune response in rainbow trout red blood cells, despite not being infective.

PubMed

Nombela, Ivan; Carrion, Aurora; Puente-Marin, Sara; Chico, Verónica; Mercado, Luis; Perez, Luis; Coll, Julio; Ortega-Villaizan, Maria Del Mar

2017-01-01

Background : Some fish viruses, such as piscine orthoreovirus and infectious salmon anemia virus, target red blood cells (RBCs), replicate inside them and induce an immune response. However, the roles of RBCs in the context of infectious pancreatic necrosis virus (IPNV) infection  have not been studied yet. Methods : Ex vivo rainbow trout RBCs were obtained from peripheral blood, Ficoll purified and exposed to IPNV in order to analyze infectivity and immune response using RT-qPCR, immune fluorescence imaging, flow cytometry and western-blotting techniques. Results : IPNV could not infect RBCs; however, IPNV increased the expression of the INF1-related genes ifn-1 , pkr and mx genes. Moreover, conditioned media from IPNV-exposed RBCs conferred protection against IPNV infection in CHSE-214 fish cell line. Conclusions : Despite not being infected, rainbow trout RBCs could respond to IPNV with increased expression of antiviral genes. Fish RBCs could be considered as mediators of the antiviral response and therefore targets of new strategies against fish viral infections. Further research is ongoing to completely understand the molecular mechanism that triggers this antiviral response in rainbow trout RBCs.

Differential gene expression associated with dietary methylmercury (MeHg) exposure in rainbow trout (Oncorhynchus mykiss) and zebrafish (Danio rerio)

PubMed Central

Liu, Qing; Basu, Niladri; Goetz, Giles; Jiang, Nan; Hutz, Reinhold J.; Tonellato, Peter J.; Carvan, Michael J.

2013-01-01

The objective of this study was to identify and evaluate conserved biomarkers that could be used in most species of teleost fish at most life-stages. We investigated the effects of sublethal methylmercury (MeHg) exposure on developing rainbow trout and zebrafish. Juvenile rainbow trout and young adult zebrafish were fed food with MeHg added at 0, 0.5, 5 and 50 ppm. Atomic absorption spectrometry was applied to measure whole body total Hg levels, and pathologic analysis was performed to identify MeHg-induced toxicity. Fish at six weeks were sampled from each group for microarray analysis using RNA from whole fish. MeHg-exposed trout and zebrafish did not show overt signs of toxicity or pathology, nor were significant differences seen in mortality, length, mass, or condition factor. The accumulation of MeHg in trout and zebrafish exhibited dose- and time-dependent patterns during six weeks, and zebrafish exhibited greater assimilation of total Hg than rainbow trout. The dysregulated genes in MeHg-treated fish have multiple functional annotations, such as iron ion homeostasis, glutathione transferase activity, regulation of muscle contraction, troponin I binding and calcium-dependent protein binding. Genes were selected as biomarker candidates based on their microarray data and their expression was evaluated by QPCR. Unfortunately, these genes are not good consistent biomarkers for both rainbow trout and zebrafish from QPCR evaluation using individual fish. Our conclusion is that biomarker analysis for aquatic toxicant assessment using fish needs to be based on tissue-, sex- and species-specific consideration. PMID:23529582

Evolution of three tandem copies of the interleukin-1 receptor-like 1 gene in salmonid fish and their contribution to rainbow trout bacterial cold water disease resistant phenotype

USDA-ARS?s Scientific Manuscript database

Rainbow trout exhibit extensive phenotypic variation in innate disease resistance. Five generations of family based selection has resulted in rainbow trout lines with either increased or reduced survival following exposure to the gram-negative bacterium, Flavobacterium psychrophilum (Fp), the causa...

Specific Roles for 17ß-Estradiol versus Gonad Development in Nutrient Partitioning and Regulation of Nutrient- and Growth-Related Mechanisms During Sexual Maturation in Rainbow Trout

USDA-ARS?s Scientific Manuscript database

The contribution of sex steroids to nutrient partitioning and energy balance during gonad development was studied in rainbow trout (Oncorhynchus mykiss). Nineteen month old triploid (3N) female rainbow trout were fed a diet supplemented with 17ß-estradiol (E2) at 30 mg steroid/kg diet for a 1 month...

Dietary Arsenic Toxicity in Subadult Rainbow Trout: Growth Effects, Nutrient Absorption, and Tissue Bioaccumulation

EPA Science Inventory

Dietary arsenic toxicity in subadult (~200 g.) rainbow trout was evaluated in a 70 day test using arsenic-spiked pellet diets containing 50, 104 and 162 ppm arsenite. All organisms in all treatments survived the exposure. Dose dependent effects on percent weight gain, with comm...

Leucine and isoleucine reduce protein degradation in rainbow trout (Oncorhynchus mykiss) primary myoblast cultures

USDA-ARS?s Scientific Manuscript database

Myogenic precursor cells were isolated from rainbow trout skeletal muscle and incubated in media containing 10% fetal bovine serum for 7 days, thereby differentiating into myoblasts. Rates of protein degradation were determined in response to minimal essential media (MEM) of various amino acid (AA)...

GWAS for detecting QTL associated with Columnaris Disease in two rainbow trout breeding populations

USDA-ARS?s Scientific Manuscript database

The purpose of this study was to prospect genomic regions that explain large portion of the additive genetic variance for resistance against Columnaris disease (CD) in rainbow trout. Two important aquaculture populations were investigated. The National Center for Cool and Cold Water Aquaculture (NCC...

EFFECTS OF CYTOSOLIC CONVERSION OF ESTRONE TO ESTRADIOL ON RAINBOW TROUT ER BINDING AFFINITY

EPA Science Inventory

Relative binding affinity (RBA) for estrone (E1) to the rainbow trout (Oncorhynchus mykiss) estrogen receptor (rtER) was measured as part of a larger effort to determine chemical structural features predictive of chemical estrogenicity in fish. Estrone RBA was found to vary consi...

Fluvial rainbow trout contribute to the colonization of steelhead (Oncorhynchus mykiss) in a small stream

USGS Publications Warehouse

Weigel, Dana E.; Connolly, Patrick J.; Powell, Madison S.

2013-01-01

Life history polymorphisms provide ecological and genetic diversity important to the long term persistence of species responding to stochastic environments. Oncorhynchus mykiss have complex and overlapping life history strategies that are also sympatric with hatchery populations. Passive integrated transponder (PIT) tags and parentage analysis were used to identify the life history, origin (hatchery or wild) and reproductive success of migratory rainbow/steelhead for two brood years after barriers were removed from a small stream. The fluvial rainbow trout provided a source of wild genotypes to the colonizing population boosting the number of successful spawners. Significantly more parr offspring were produced by anadromous parents than expected in brood year 2005, whereas significantly more parr offspring were produced by fluvial parents than expected in brood year 2006. Although hatchery steelhead were prevalent in the Methow Basin, they produced only 2 parr and no returning adults in Beaver Creek. On average, individual wild steelhead produced more parr offspring than the fluvial or hatchery groups. Yet, the offspring that returned as adult steelhead were from parents that produced few parr offspring, indicating that high production of parr offspring may not be related to greater returns of adult offspring. These data in combination with other studies of sympatric life histories of O. mykiss indicate that fluvial rainbow trout are important to the conservation and recovery of steelhead and should be included in the management and recovery efforts.

Effects of fish age and parasite dose on the development of whirling disease in rainbow trout.

PubMed

Ryce, Eileen K N; Zale, Alexander V; MacConnell, Elizabeth

2004-06-11

We determined the ages at which juvenile rainbow trout Oncorhynchus mykiss became resistant to the effects of whirling disease following exposure to a range of parasite doses. Heretofore, the development and severity of whirling disease in salmonids was known to be generally dependent on the age or size of fish when first exposed to the triactinomyxon spores of Myxobolus cerebralis; larger, older individuals tended to be less diseased. However, no systematic determination had been made of the exact age at which fish become resistant to the development of the disease. We exposed rainbow trout at 9 ages (1 to 17 wk post-hatch) to 4 parasite dose levels (0, 100, 1000 and 10,000 triactinomyxons per fish). Disease severity was measured using mortality, clinical signs, microscopic pathology, and myxospore counts. Disease and mortality were substantially reduced when exposure to the parasite occurred for the first time at 9 wk post-hatch (756 degree-days at 12 degrees C) or older. High doses elicited more disease among the younger age groups, but the effect was dampened in groups exposed at about 9 to 11 wk post-hatch and absent thereafter. Rainbow trout reared in M. cerebralis-free waters for 9 wk post-hatch or longer, whether in the wild or in a hatchery situation, should experience greater survival and less disease than fish first exposed to the parasite at younger ages.

Lipopolysaccharide O-Antigen Prevents Phagocytosis of Vibrio anguillarum by Rainbow Trout (Oncorhynchus mykiss) Skin Epithelial Cells

PubMed Central

Lindell, Kristoffer; Fahlgren, Anna; Hjerde, Erik; Willassen, Nils-Peder; Fällman, Maria; Milton, Debra L.

2012-01-01

Colonization of host tissues is a first step taken by many pathogens during the initial stages of infection. Despite the impact of bacterial disease on wild and farmed fish, only a few direct studies have characterized bacterial factors required for colonization of fish tissues. In this study, using live-cell and confocal microscopy, rainbow trout skin epithelial cells, the main structural component of the skin epidermis, were demonstrated to phagocytize bacteria. Mutant analyses showed that the fish pathogen Vibrio anguillarum required the lipopolysaccharide O-antigen to evade phagocytosis and that O-antigen transport required the putative wzm-wzt-wbhA operon, which encodes two ABC polysaccharide transporter proteins and a methyltransferase. Pretreatment of the epithelial cells with mannose prevented phagocytosis of V. anguillarum suggesting that a mannose receptor is involved in the uptake process. In addition, the O-antigen transport mutants could not colonize the skin but they did colonize the intestines of rainbow trout. The O-antigen polysaccharides were also shown to aid resistance to the antimicrobial factors, lysozyme and polymyxin B. In summary, rainbow trout skin epithelial cells play a role in the fish innate immunity by clearing bacteria from the skin epidermis. In defense, V. anguillarum utilizes O-antigen polysaccharides to evade phagocytosis by the epithelial cells allowing it to colonize rapidly fish skin tissues. PMID:22662189

Residue dynamics of quinaldine and TFM in rainbow trout

USGS Publications Warehouse

Hunn, J.B.; Allen, J.L.

1975-01-01

Study of the residue dynamics of 2-methylquinoline (quinaldine) and 3- trifluoromethy1-4-nitrophenol (TFM) in rainbow trout yielded the following findings: (1) Uptake and distribution of TFM by trout was influenced by the biotransformation of the lipid-soluble free phenol. No such effect was observed with quinaldine. (2) Disappearance of quinaldine and TFM from gallbladder bile was slower than from plasma or muscle during 24 hr of withdrawal in fresh water. (3) The conc of TFM conjugate may exceed that of free TFM in bile by a factor of 10 Super(3).

An ecological risk assessment of the exposure and effects of 2,4-D acid to rainbow trout (Onchorhyncus mykiss)

USGS Publications Warehouse

Fairchild, J.F.; Feltz, K.P.; Allert, A.L.; Sappington, L.C.; Nelson, K.J.; Valle, J.A.

2009-01-01

Numerous state and federal agencies are increasingly concerned with the rapid expansion of invasive, noxious weeds across the United States. Herbicides are frequently applied as weed control measures in forest and rangeland ecosystems that frequently overlap with critical habitats of threatened and endangered fish species. However, there is little published chronic toxicity data for herbicides and fish that can be used to assess ecological risk of herbicides in aquatic environments. We conducted 96-h flowthrough acute and 30-day chronic toxicity studies with swim-up larvae and juvenile rainbow trout (Onchorhyncus mykiss) exposed to the free acid form of 2,4-D. Juvenile rainbow trout were acutely sensitive to 2,4-D acid equivalent at 494 mg/L (95% confidence interval [CI] 334-668 mg/L; 96-h ALC50). Accelerated life-testing procedures, used to estimate chronic mortality from acute data, predicted that a 30-day exposure of juvenile rainbow trout to 2,4-D would result in 1% and 10% mortality at 260 and 343 mg/L, respectively. Swim-up larvae were chronically more sensitive than juveniles using growth as the measurement end point. The 30-day lowest observable effect concentration (LOEC) of 2,4-D on growth of swim-up larvae was 108 mg/L, whereas the 30-day no observable effect concentration (NOEC) was 54 mg/L. The 30-day maximum acceptable toxicant concentration (MATC) of 2,4-D for rainbow trout, determined as the geometric mean of the NOEC and the LOEC, was 76 mg/L. The acute:chronic ratio was 6.5 (i.e., 494/76). We observed no chronic effects on growth of juvenile rainbow trout at the highest concentration tested (108 mg/L). Worst-case aquatic exposures to 2,4-D (4 mg/L) occur when the herbicide is directly applied to aquatic ecosystems for aquatic weed control and resulted in a 30-day safety factor of 19 based on the MATC for growth (i.e., 76/4). Highest nontarget aquatic exposures to 2,4-D applied following terrestrial use is calculated at 0.136 mg/L and resulted in a

Effects of cooking techniques on fatty acid and oxylipin content of farmed rainbow trout (Oncorhynchus mykiss).

PubMed

Flaskerud, Katrina; Bukowski, Michael; Golovko, Mikhail; Johnson, LuAnn; Brose, Stephen; Ali, Ashrifa; Cleveland, Beth; Picklo, Matthew; Raatz, Susan

2017-11-01

The aim of this study was to investigate the effect of various cooking techniques on the fatty acid and oxylipin content of farmed rainbow trout. Rainbow trout is an excellent source of long-chain omega-3 ( n -3) polyunsaturated fatty acids (PUFA) which have beneficial health effects. Fillets of 2-year-old farmed rainbow trout were baked, broiled, microwaved, or pan-fried in corn (CO), canola (CaO), peanut (PO), or high oleic sunflower oil (HOSO). Fatty acids and oxidized lipids were extracted from these samples and their respective raw fillet samples. Fatty acid content was determined using gas chromatography and oxylipin content by mass spectroscopy. The values obtained from each cooking method were compared to those obtained from the respective raw fillets using paired t tests. PUFA content was not altered when samples were baked, broiled, microwaved, or pan-fried in CO or CaO. Pan-frying in PO reduced α-linolenic acid (18:3 n -3), eicosadienoic acid (20:2 n -6), and dihomo-γ-linolenic acid (20:3 n -6), while pan-frying in HOSO reduced 18:3 n -3, eicosapentaenoic acid (20:5 n -3), docosapentaenoic acid (22:5 n -3), docosahexaenoic acid (22:6 n -3), linoleic acid (18:2 n -6), 18:3 n -6, 20:2 n -6, 20:3 n -6, docosatrienoic acid (22:2 n -6), and adrenic acid (22:4 n -6) compared to raw fish. Cooking decreased the omega-6 ( n -6) PUFA-derived oxylipins, but caused no change in 20:5 n -3 or 22:6 n -3-derived oxylipins of the fillets. In conclusion, pan-frying was the only cooking method to alter the fatty acid content of the fillets, while observed changes in oxylipin content varied by cooking method. As the physiological impact of oxylipins is currently unknown, these results suggest that the cooking methods which optimize the consumption of n -3 PUFA from rainbow trout are baking, broiling, microwaving, or pan-frying in CO, CaO, or PO.

B cell signatures of BCWD-resistant and susceptible lines of rainbow trout: a shift towards more EBF-expressing progenitors and fewer mature B cells in resistant animals

USDA-ARS?s Scientific Manuscript database

Bacterial Cold Water Disease (BCWD) is a chronic disease of rainbow trout, and is caused by the gram-negative bacterium Flavobacterium psychrophilum (Fp), a common aquaculture pathogen. The National Center for Cool and Cold Water Aquaculture has bred two genetic lines of rainbow trout: a line of Fp...

Mapping and expression of candidate genes for development rate in rainbow trout (Oncorhynchus mykiss)

USDA-ARS?s Scientific Manuscript database

Development rate has important implications for many aspects of an individual's biology. In rainbow trout (Oncorhynchus mykiss), a major QTL for embryonic development rate has been detected on chromosome 5, but at present, few candidate genes have been mapped to this region. This paucity of known ge...

Field evaluation of rainbow trout selectively bred for resistance to bacterial cold water disease

USDA-ARS?s Scientific Manuscript database

Bacterial cold water disease (BCWD) is a frequent cause of elevated mortality in rainbow trout and the development of effective control strategies is a priority within the U.S. Since 2005, the NCCCWA has implemented a selective breeding program designed to increase survival following BCWD exposure....

Immunization of rainbow trout Oncorhynchus mykiss (Walbaum) with a crude lipopolysaccharide extract from Flavobacterium psychrophilum

USDA-ARS?s Scientific Manuscript database

Control methods for Flavobacterium psychrophilum, the etiologic agent of bacterial coldwater disease (CWD) and rainbow trout fry syndrome, are limited and oftentimes ineffective; hence, research efforts have focused on vaccine development. This study tested the hypothesis that a crude lipopolysacch...