Sample records for quantized biopolymer translocation

  1. Observing cellulose biosynthesis and membrane translocation in crystallo

    PubMed Central

    Morgan, Jacob L.W.; McNamara, Joshua T.; Fischer, Michael; Rich, Jamie; Chen, Hong-Ming; Withers, Stephen G.; Zimmer, Jochen

    2016-01-01

    Many biopolymers, including polysaccharides, must be translocated across at least one membrane to reach their site of biological function. Cellulose is a linear glucose polymer synthesized and secreted by a membrane-integrated cellulose synthase. In crystallo enzymology with the catalytically-active bacterial cellulose synthase BcsA-B complex reveals structural snapshots of a complete cellulose biosynthesis cycle, from substrate binding to polymer translocation. Substrate and product-bound structures of BcsA provide the basis for substrate recognition and demonstrate the stepwise elongation of cellulose. Furthermore, the structural snapshots show that BcsA translocates cellulose via a ratcheting mechanism involving a “finger helix” that contacts the polymer's terminal glucose. Cooperating with BcsA's gating loop, the finger helix moves ‘up’ and ‘down’ in response to substrate binding and polymer elongation, respectively, thereby pushing the elongated polymer into BcsA’s transmembrane channel. This mechanism is validated experimentally by tethering BcsA's finger helix, which inhibits polymer translocation but not elongation. PMID:26958837

  2. Through the eye of the needle: recent advances in understanding biopolymer translocation.

    PubMed

    Panja, Debabrata; Barkema, Gerard T; Kolomeisky, Anatoly B

    2013-10-16

    In recent years polymer translocation, i.e., transport of polymeric molecules through nanometer-sized pores and channels embedded in membranes, has witnessed strong advances. It is now possible to observe single-molecule polymer dynamics during the motion through channels with unprecedented spatial and temporal resolution. These striking experimental studies have stimulated many theoretical developments. In this short theory-experiment review, we discuss recent progress in this field with a strong focus on non-equilibrium aspects of polymer dynamics during the translocation process.

  3. Recent advances in biopolymers and biopolymer-based nanocomposites for food packaging materials.

    PubMed

    Tang, X Z; Kumar, P; Alavi, S; Sandeep, K P

    2012-01-01

    Plastic packaging for food and non-food applications is non-biodegradable, and also uses up valuable and scarce non-renewable resources like petroleum. With the current focus on exploring alternatives to petroleum and emphasis on reduced environmental impact, research is increasingly being directed at development of biodegradable food packaging from biopolymer-based materials. The proposed paper will present a review of recent developments in biopolymer-based food packaging materials including natural biopolymers (such as starches and proteins), synthetic biopolymers (such as poly lactic acid), biopolymer blends, and nanocomposites based on natural and synthetic biopolymers. The paper will discuss the various techniques that have been used for developing cost-effective biodegradable packaging materials with optimum mechanical strength and oxygen and moisture barrier properties. This is a timely review as there has been a recent renewed interest in research studies, both in the industry and academia, towards development of a new generation of biopolymer-based food packaging materials with possible applications in other areas.

  4. Multilevel description of the DNA molecule translocation in solid-state synthetic nanopores

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nosik, V. L., E-mail: v-nosik@yandex.ru; Rudakova, E. B.

    2016-07-15

    Interest of researchers in micro- and nanofluidics of polymer solutions and, in particular, DNA ionic solutions is constantly increasing. The use of DNA translocation with a controlled velocity through solid-state nanopores and pulsed X-ray beams in new sequencing schemes opens up new possibilities for studying the structure of DNA and other biopolymers. The problems related to the description of DNA molecular motion in a limited volume of nanopore are considered.

  5. Coupled biopolymer networks

    NASA Astrophysics Data System (ADS)

    Schwarz, J. M.; Zhang, Tao

    2015-03-01

    The actin cytoskeleton provides the cell with structural integrity and allows it to change shape to crawl along a surface, for example. The actin cytoskeleton can be modeled as a semiflexible biopolymer network that modifies its morphology in response to both external and internal stimuli. Just inside the inner nuclear membrane of a cell exists a network of filamentous lamin that presumably protects the heart of the cell nucleus--the DNA. Lamins are intermediate filaments that can also be modeled as semiflexible biopolymers. It turns out that the actin cytoskeletal biopolymer network and the lamin biopolymer network are coupled via a sequence of proteins that bridge the outer and inner nuclear membranes. We, therefore, probe the consequences of such a coupling via numerical simulations to understand the resulting deformations in the lamin network in response to perturbations in the cytoskeletal network. Such study could have implications for mechanical mechanisms of the regulation of transcription, since DNA--yet another semiflexible polymer--contains lamin-binding domains, and, thus, widen the field of epigenetics.

  6. Biopolymer Aerogels and Foams: Chemistry, Properties, and Applications.

    PubMed

    Zhao, Shanyu; Malfait, Wim J; Guerrero-Alburquerque, Natalia; Koebel, Matthias M; Nyström, Gustav

    2018-06-25

    Biopolymer aerogels were among the first aerogels produced, but only in the last decade has research on biopolymer and biopolymer-composite aerogels become popular, motivated by sustainability arguments, their unique and tunable properties, and ease of functionalization. Biopolymer aerogels and open-cell foams have great potential for classical aerogel applications such as thermal insulation, as well as emerging applications in filtration, oil-water separation, CO 2 capture, catalysis, and medicine. The biopolymer aerogel field today is driven forward by empirical materials discovery at the laboratory scale, but requires a firmer theoretical basis and pilot studies to close the gap to market. This Review includes a database with over 3800 biopolymer aerogel properties, evaluates the state of the biopolymer aerogel field, and critically discusses the scientific, technological, and commercial barriers to the commercialization of these exciting materials. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  7. Optimal Quantization Scheme for Data-Efficient Target Tracking via UWSNs Using Quantized Measurements.

    PubMed

    Zhang, Senlin; Chen, Huayan; Liu, Meiqin; Zhang, Qunfei

    2017-11-07

    Target tracking is one of the broad applications of underwater wireless sensor networks (UWSNs). However, as a result of the temporal and spatial variability of acoustic channels, underwater acoustic communications suffer from an extremely limited bandwidth. In order to reduce network congestion, it is important to shorten the length of the data transmitted from local sensors to the fusion center by quantization. Although quantization can reduce bandwidth cost, it also brings about bad tracking performance as a result of information loss after quantization. To solve this problem, this paper proposes an optimal quantization-based target tracking scheme. It improves the tracking performance of low-bit quantized measurements by minimizing the additional covariance caused by quantization. The simulation demonstrates that our scheme performs much better than the conventional uniform quantization-based target tracking scheme and the increment of the data length affects our scheme only a little. Its tracking performance improves by only 4.4% from 2- to 3-bit, which means our scheme weakly depends on the number of data bits. Moreover, our scheme also weakly depends on the number of participate sensors, and it can work well in sparse sensor networks. In a 6 × 6 × 6 sensor network, compared with 4 × 4 × 4 sensor networks, the number of participant sensors increases by 334.92%, while the tracking accuracy using 1-bit quantized measurements improves by only 50.77%. Overall, our optimal quantization-based target tracking scheme can achieve the pursuit of data-efficiency, which fits the requirements of low-bandwidth UWSNs.

  8. BRST quantization of cosmological perturbations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Armendariz-Picon, Cristian; Şengör, Gizem

    2016-11-08

    BRST quantization is an elegant and powerful method to quantize theories with local symmetries. In this article we study the Hamiltonian BRST quantization of cosmological perturbations in a universe dominated by a scalar field, along with the closely related quantization method of Dirac. We describe how both formalisms apply to perturbations in a time-dependent background, and how expectation values of gauge-invariant operators can be calculated in the in-in formalism. Our analysis focuses mostly on the free theory. By appropriate canonical transformations we simplify and diagonalize the free Hamiltonian. BRST quantization in derivative gauges allows us to dramatically simplify the structuremore » of the propagators, whereas Dirac quantization, which amounts to quantization in synchronous gauge, dispenses with the need to introduce ghosts and preserves the locality of the gauge-fixed action.« less

  9. System for measuring radioactivity of labelled biopolymers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gross, V.

    1980-07-08

    A system is described for measuring radioactivity of labelled biopolymers, comprising: a set of containers adapted for receiving aqueous solutions of biological samples containing biopolymers which are subsequently precipitated in said containers on particles of diatomite in the presence of a coprecipitator, then filtered, dissolved, and mixed with a scintillator; radioactivity measuring means including a detection chamber to which is fed the mixture produced in said set of containers; an electric drive for moving said set of containers in a stepwise manner; means for proportional feeding of said coprecipitator and a suspension of diatomite in an acid solution to saidmore » containers which contain the biological sample for forming an acid precipitation of biopolymers; means for the removal of precipitated samples from said containers; precipitated biopolymer filtering means for successively filtering the precipitate, suspending the precipitate, dissolving the biopolymers mixed with said scintillator for feeding of the mixture to said detection chamber; a system of pipelines interconnecting said above-recited means; and said means for measuring radioactivity of labelled biopolymers including, a measuring cell arranged in a detection chamber and communicating with said means for filtering precipitated biopolymers through one pipeline of said system of pipelines; a program unit electrically connected to said electric drive, said means for acid precipatation of biopolymers, said means for the removal of precipitated samples from said containers, said filtering means, and said radioactivity measuring device; said program unit adapted to periodically switch on and off the above-recited means and check the sequence of the radioactivity measuring operations; and a control unit for controlling the initiation of the system and for selecting programs.« less

  10. Vector quantization

    NASA Technical Reports Server (NTRS)

    Gray, Robert M.

    1989-01-01

    During the past ten years Vector Quantization (VQ) has developed from a theoretical possibility promised by Shannon's source coding theorems into a powerful and competitive technique for speech and image coding and compression at medium to low bit rates. In this survey, the basic ideas behind the design of vector quantizers are sketched and some comments made on the state-of-the-art and current research efforts.

  11. Nearly associative deformation quantization

    NASA Astrophysics Data System (ADS)

    Vassilevich, Dmitri; Oliveira, Fernando Martins Costa

    2018-04-01

    We study several classes of non-associative algebras as possible candidates for deformation quantization in the direction of a Poisson bracket that does not satisfy Jacobi identities. We show that in fact alternative deformation quantization algebras require the Jacobi identities on the Poisson bracket and, under very general assumptions, are associative. At the same time, flexible deformation quantization algebras exist for any Poisson bracket.

  12. Quantized Majorana conductance

    NASA Astrophysics Data System (ADS)

    Zhang, Hao; Liu, Chun-Xiao; Gazibegovic, Sasa; Xu, Di; Logan, John A.; Wang, Guanzhong; van Loo, Nick; Bommer, Jouri D. S.; de Moor, Michiel W. A.; Car, Diana; Op Het Veld, Roy L. M.; van Veldhoven, Petrus J.; Koelling, Sebastian; Verheijen, Marcel A.; Pendharkar, Mihir; Pennachio, Daniel J.; Shojaei, Borzoyeh; Lee, Joon Sue; Palmstrøm, Chris J.; Bakkers, Erik P. A. M.; Sarma, S. Das; Kouwenhoven, Leo P.

    2018-04-01

    Majorana zero-modes—a type of localized quasiparticle—hold great promise for topological quantum computing. Tunnelling spectroscopy in electrical transport is the primary tool for identifying the presence of Majorana zero-modes, for instance as a zero-bias peak in differential conductance. The height of the Majorana zero-bias peak is predicted to be quantized at the universal conductance value of 2e2/h at zero temperature (where e is the charge of an electron and h is the Planck constant), as a direct consequence of the famous Majorana symmetry in which a particle is its own antiparticle. The Majorana symmetry protects the quantization against disorder, interactions and variations in the tunnel coupling. Previous experiments, however, have mostly shown zero-bias peaks much smaller than 2e2/h, with a recent observation of a peak height close to 2e2/h. Here we report a quantized conductance plateau at 2e2/h in the zero-bias conductance measured in indium antimonide semiconductor nanowires covered with an aluminium superconducting shell. The height of our zero-bias peak remains constant despite changing parameters such as the magnetic field and tunnel coupling, indicating that it is a quantized conductance plateau. We distinguish this quantized Majorana peak from possible non-Majorana origins by investigating its robustness to electric and magnetic fields as well as its temperature dependence. The observation of a quantized conductance plateau strongly supports the existence of Majorana zero-modes in the system, consequently paving the way for future braiding experiments that could lead to topological quantum computing.

  13. Quantized Majorana conductance.

    PubMed

    Zhang, Hao; Liu, Chun-Xiao; Gazibegovic, Sasa; Xu, Di; Logan, John A; Wang, Guanzhong; van Loo, Nick; Bommer, Jouri D S; de Moor, Michiel W A; Car, Diana; Op Het Veld, Roy L M; van Veldhoven, Petrus J; Koelling, Sebastian; Verheijen, Marcel A; Pendharkar, Mihir; Pennachio, Daniel J; Shojaei, Borzoyeh; Lee, Joon Sue; Palmstrøm, Chris J; Bakkers, Erik P A M; Sarma, S Das; Kouwenhoven, Leo P

    2018-04-05

    Majorana zero-modes-a type of localized quasiparticle-hold great promise for topological quantum computing. Tunnelling spectroscopy in electrical transport is the primary tool for identifying the presence of Majorana zero-modes, for instance as a zero-bias peak in differential conductance. The height of the Majorana zero-bias peak is predicted to be quantized at the universal conductance value of 2e 2 /h at zero temperature (where e is the charge of an electron and h is the Planck constant), as a direct consequence of the famous Majorana symmetry in which a particle is its own antiparticle. The Majorana symmetry protects the quantization against disorder, interactions and variations in the tunnel coupling. Previous experiments, however, have mostly shown zero-bias peaks much smaller than 2e 2 /h, with a recent observation of a peak height close to 2e 2 /h. Here we report a quantized conductance plateau at 2e 2 /h in the zero-bias conductance measured in indium antimonide semiconductor nanowires covered with an aluminium superconducting shell. The height of our zero-bias peak remains constant despite changing parameters such as the magnetic field and tunnel coupling, indicating that it is a quantized conductance plateau. We distinguish this quantized Majorana peak from possible non-Majorana origins by investigating its robustness to electric and magnetic fields as well as its temperature dependence. The observation of a quantized conductance plateau strongly supports the existence of Majorana zero-modes in the system, consequently paving the way for future braiding experiments that could lead to topological quantum computing.

  14. Investigation on wear characteristic of biopolymer gear

    NASA Astrophysics Data System (ADS)

    Ghazali, Wafiuddin Bin Md; Daing Idris, Daing Mohamad Nafiz Bin; Sofian, Azizul Helmi Bin; Basrawi, Mohamad Firdaus bin; Khalil Ibrahim, Thamir

    2017-10-01

    Polymer is widely used in many mechanical components such as gear. With the world going to a more green and sustainable environment, polymers which are bio based are being recognized as a replacement for conventional polymers based on fossil fuel. The use of biopolymer in mechanical components especially gear have not been fully explored yet. This research focuses on biopolymer for spur gear and whether the conventional method to investigate wear characteristic is applicable. The spur gears are produced by injection moulding and tested on several speeds using a custom test equipment. The wear formation such as tooth fracture, tooth deformation, debris and weight loss was observed on the biopolymer spur gear. It was noted that the biopolymer gear wear mechanism was similar with other type of polymer spur gears. It also undergoes stages of wear which are; running in, linear and rapid. It can be said that the wear mechanism of biopolymer spur gear is comparable to fossil fuel based polymer spur gear, thus it can be considered to replace polymer gears in suitable applications.

  15. Deformation of second and third quantization

    NASA Astrophysics Data System (ADS)

    Faizal, Mir

    2015-03-01

    In this paper, we will deform the second and third quantized theories by deforming the canonical commutation relations in such a way that they become consistent with the generalized uncertainty principle. Thus, we will first deform the second quantized commutator and obtain a deformed version of the Wheeler-DeWitt equation. Then we will further deform the third quantized theory by deforming the third quantized canonical commutation relation. This way we will obtain a deformed version of the third quantized theory for the multiverse.

  16. Quantization and fractional quantization of currents in periodically driven stochastic systems. I. Average currents

    NASA Astrophysics Data System (ADS)

    Chernyak, Vladimir Y.; Klein, John R.; Sinitsyn, Nikolai A.

    2012-04-01

    This article studies Markovian stochastic motion of a particle on a graph with finite number of nodes and periodically time-dependent transition rates that satisfy the detailed balance condition at any time. We show that under general conditions, the currents in the system on average become quantized or fractionally quantized for adiabatic driving at sufficiently low temperature. We develop the quantitative theory of this quantization and interpret it in terms of topological invariants. By implementing the celebrated Kirchhoff theorem we derive a general and explicit formula for the average generated current that plays a role of an efficient tool for treating the current quantization effects.

  17. An adaptive vector quantization scheme

    NASA Technical Reports Server (NTRS)

    Cheung, K.-M.

    1990-01-01

    Vector quantization is known to be an effective compression scheme to achieve a low bit rate so as to minimize communication channel bandwidth and also to reduce digital memory storage while maintaining the necessary fidelity of the data. However, the large number of computations required in vector quantizers has been a handicap in using vector quantization for low-rate source coding. An adaptive vector quantization algorithm is introduced that is inherently suitable for simple hardware implementation because it has a simple architecture. It allows fast encoding and decoding because it requires only addition and subtraction operations.

  18. Canonical quantization of classical mechanics in curvilinear coordinates. Invariant quantization procedure

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Błaszak, Maciej, E-mail: blaszakm@amu.edu.pl; Domański, Ziemowit, E-mail: ziemowit@amu.edu.pl

    In the paper is presented an invariant quantization procedure of classical mechanics on the phase space over flat configuration space. Then, the passage to an operator representation of quantum mechanics in a Hilbert space over configuration space is derived. An explicit form of position and momentum operators as well as their appropriate ordering in arbitrary curvilinear coordinates is demonstrated. Finally, the extension of presented formalism onto non-flat case and related ambiguities of the process of quantization are discussed. -- Highlights: •An invariant quantization procedure of classical mechanics on the phase space over flat configuration space is presented. •The passage tomore » an operator representation of quantum mechanics in a Hilbert space over configuration space is derived. •Explicit form of position and momentum operators and their appropriate ordering in curvilinear coordinates is shown. •The invariant form of Hamiltonian operators quadratic and cubic in momenta is derived. •The extension of presented formalism onto non-flat case and related ambiguities of the quantization process are discussed.« less

  19. Visibility of wavelet quantization noise

    NASA Technical Reports Server (NTRS)

    Watson, A. B.; Yang, G. Y.; Solomon, J. A.; Villasenor, J.

    1997-01-01

    The discrete wavelet transform (DWT) decomposes an image into bands that vary in spatial frequency and orientation. It is widely used for image compression. Measures of the visibility of DWT quantization errors are required to achieve optimal compression. Uniform quantization of a single band of coefficients results in an artifact that we call DWT uniform quantization noise; it is the sum of a lattice of random amplitude basis functions of the corresponding DWT synthesis filter. We measured visual detection thresholds for samples of DWT uniform quantization noise in Y, Cb, and Cr color channels. The spatial frequency of a wavelet is r 2-lambda, where r is display visual resolution in pixels/degree, and lambda is the wavelet level. Thresholds increase rapidly with wavelet spatial frequency. Thresholds also increase from Y to Cr to Cb, and with orientation from lowpass to horizontal/vertical to diagonal. We construct a mathematical model for DWT noise detection thresholds that is a function of level, orientation, and display visual resolution. This allows calculation of a "perceptually lossless" quantization matrix for which all errors are in theory below the visual threshold. The model may also be used as the basis for adaptive quantization schemes.

  20. Insights into the sorption properties of cutin and cutan biopolymers.

    PubMed

    Shechter, Michal; Chefetz, Benny

    2008-02-15

    Plant cuticles have been reported as highly efficient sorbents for organic compounds. The objective of this study was to elucidate the sorption and desorption behavior of polar and nonpolar organic compounds with the major structural components of the plant cuticle: the biopolymers cutin and cutan. The sorption affinity values of the studied compounds followed the order: phenanthrene > atrazine > chlorotoluron > carbamazepine. A higher sorption affinity of phenanthrene and atrazine to cutin was probably due to the higher level of amorphous paraffinic carbon in this biopolymer. Phenanthrene exhibited reversible sorption behavior and a high ratio of organic-carbon-normalized distribution coefficient (Koc) to carbon-normalized octanol-water partitioning coefficients (Kowc) with both biopolymers. This suggests that both biopolymers provide phenanthrene with a partition medium for hydrophobic interactions with the flexible long alkyl-chain moieties of the biopolymers. The low Koc/Kowc ratios obtained for the polar sorbates suggest that the polar sites in the biopolymers are not accessible for sorption interactions. Atrazine and carbamazepine exhibited sorption-desorption hysteresis with both sorbents, indicating that both sorbates interact with cutin and cutan via both hydrophobic and specific interactions. In general, the sorptive properties of the studied biopolymers were similar, signifying that the active sorption sites are similar even though the biopolymers exhibit different properties.

  1. Quantized discrete space oscillators

    NASA Technical Reports Server (NTRS)

    Uzes, C. A.; Kapuscik, Edward

    1993-01-01

    A quasi-canonical sequence of finite dimensional quantizations was found which has canonical quantization as its limit. In order to demonstrate its practical utility and its numerical convergence, this formalism is applied to the eigenvalue and 'eigenfunction' problem of several harmonic and anharmonic oscillators.

  2. Quantum Computing and Second Quantization

    DOE PAGES

    Makaruk, Hanna Ewa

    2017-02-10

    Quantum computers are by their nature many particle quantum systems. Both the many-particle arrangement and being quantum are necessary for the existence of the entangled states, which are responsible for the parallelism of the quantum computers. Second quantization is a very important approximate method of describing such systems. This lecture will present the general idea of the second quantization, and discuss shortly some of the most important formulations of second quantization.

  3. Quantum Computing and Second Quantization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Makaruk, Hanna Ewa

    Quantum computers are by their nature many particle quantum systems. Both the many-particle arrangement and being quantum are necessary for the existence of the entangled states, which are responsible for the parallelism of the quantum computers. Second quantization is a very important approximate method of describing such systems. This lecture will present the general idea of the second quantization, and discuss shortly some of the most important formulations of second quantization.

  4. BFV approach to geometric quantization

    NASA Astrophysics Data System (ADS)

    Fradkin, E. S.; Linetsky, V. Ya.

    1994-12-01

    A gauge-invariant approach to geometric quantization is developed. It yields a complete quantum description for dynamical systems with non-trivial geometry and topology of the phase space. The method is a global version of the gauge-invariant approach to quantization of second-class constraints developed by Batalin, Fradkin and Fradkina (BFF). Physical quantum states and quantum observables are respectively described by covariantly constant sections of the Fock bundle and the bundle of hermitian operators over the phase space with a flat connection defined by the nilpotent BVF-BRST operator. Perturbative calculation of the first non-trivial quantum correction to the Poisson brackets leads to the Chevalley cocycle known in deformation quantization. Consistency conditions lead to a topological quantization condition with metaplectic anomaly.

  5. Deformation quantization of fermi fields

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Galaviz, I.; Garcia-Compean, H.; Departamento de Fisica, Centro de Investigacion y de Estudios Avanzados del IPN, P.O. Box 14-740, 07000 Mexico, D.F.

    2008-04-15

    Deformation quantization for any Grassmann scalar free field is described via the Weyl-Wigner-Moyal formalism. The Stratonovich-Weyl quantizer, the Moyal *-product and the Wigner functional are obtained by extending the formalism proposed recently in [I. Galaviz, H. Garcia-Compean, M. Przanowski, F.J. Turrubiates, Weyl-Wigner-Moyal Formalism for Fermi Classical Systems, arXiv:hep-th/0612245] to the fermionic systems of infinite number of degrees of freedom. In particular, this formalism is applied to quantize the Dirac free field. It is observed that the use of suitable oscillator variables facilitates considerably the procedure. The Stratonovich-Weyl quantizer, the Moyal *-product, the Wigner functional, the normal ordering operator, and finally,more » the Dirac propagator have been found with the use of these variables.« less

  6. Effect of ozone on biopolymers in biofiltration and ultrafiltration processes.

    PubMed

    Siembida-Lösch, Barbara; Anderson, William B; Wang, Yulang Michael; Bonsteel, Jane; Huck, Peter M

    2015-03-01

    The focus of this full-scale study was to determine the effect of ozone on biopolymer concentrations in biofiltration and ultrafiltration (UF) processes treating surface water from Lake Ontario. Ozonation was out of service for maintenance for 9 months, hence, it was possible to investigate ozone's action on biologically active carbon contactors (BACCs) and UF, in terms of biopolymer removal. Given the importance of biopolymers for fouling, this fraction was quantified using a chromatographic technique. Ozone pre-treatment was observed to positively impact the active biomass in biofilters. However, since an increase of the active biomass did not result in higher biopolymer removal, active biomass concentration cannot be a surrogate for biofiltration performance. It was evident that increasing empty bed contact time (EBCT) from 4 to 19 min only had a positive effect on biopolymer removal through BACCs when ozone was out of service. However, as a mass balance experiment showed, ozone-free operation resulted in higher deposition of biopolymers on a UF membrane and slight deterioration in its performance. Copyright © 2014 Elsevier Ltd. All rights reserved.

  7. Lignin biopolymer based triboelectric nanogenerators

    NASA Astrophysics Data System (ADS)

    Bao, Yukai; Wang, Ruoxing; Lu, Yunmei; Wu, Wenzhuo

    2017-07-01

    Ongoing research in triboelectric nanogenerators (TENGs) focuses on increasing power generation, but obstacles concerning economical and eco-friendly utilization of TENGs continue to prevail. Being the second most abundant biopolymer on earth, lignin offers a valuable opportunity for low-cost TENG applications in biomedical devices, benefitting from its biodegradability and biocompatibility. Here, we develop for the first time a lignin biopolymer based TENGs for harvesting mechanical energy in the environment, which shows great potential for self-powered biomedical devices among other applications and opens doors to new technologies that utilize otherwise wasted materials for economically feasible and ecologically friendly production of energy devices.

  8. Hydrogels from biopolymer hybrid for biomedical, food, and functional food applications

    USDA-ARS?s Scientific Manuscript database

    Hybrid hydrogels from biopolymers have been applied for various indications across a wide range of biomedical, pharmaceutical, and functional food industries. In particular, hybrid hydrogels synthesized from two biopolymers have attracted increasing attention. The inclusion of a second biopolymer st...

  9. End-of-life of starch-polyvinyl alcohol biopolymers.

    PubMed

    Guo, M; Stuckey, D C; Murphy, R J

    2013-01-01

    This study presents a life cycle assessment (LCA) model comparing the waste management options for starch-polyvinyl alcohol (PVOH) biopolymers including landfill, anaerobic digestion (AD), industrial composting and home composting. The ranking of biological treatment routes for starch-PVOH biopolymer wastes depended on their chemical compositions. AD represents the optimum choice for starch-PVOH biopolymer containing N and S elements in global warming potential (GWP(100)), acidification and eutrophication but not on the remaining impact categories, where home composting was shown to be a better option due to its low energy and resource inputs. For those starch-PVOH biopolymers with zero N and S contents home composting delivered the best environmental performance amongst biological treatment routes in most impact categories (except for GWP(100)). The landfill scenario performed generally well due largely to the 100-year time horizon and efficient energy recovery system modeled but this good performance is highly sensitive to assumptions adopted in landfill model. Copyright © 2012 Elsevier Ltd. All rights reserved.

  10. Perceptual Optimization of DCT Color Quantization Matrices

    NASA Technical Reports Server (NTRS)

    Watson, Andrew B.; Statler, Irving C. (Technical Monitor)

    1994-01-01

    Many image compression schemes employ a block Discrete Cosine Transform (DCT) and uniform quantization. Acceptable rate/distortion performance depends upon proper design of the quantization matrix. In previous work, we showed how to use a model of the visibility of DCT basis functions to design quantization matrices for arbitrary display resolutions and color spaces. Subsequently, we showed how to optimize greyscale quantization matrices for individual images, for optimal rate/perceptual distortion performance. Here we describe extensions of this optimization algorithm to color images.

  11. Fine Structure of Starch-Clay Composites as Biopolymers

    USDA-ARS?s Scientific Manuscript database

    Midsol 50 wheat starch and 5% Cloisite clay with or without the addition of glycerin were used to prepare biopolymers in a twin-screw extruder. Early trials of sectioning the unembedded biopolymer resulted in the immediate absorption of water and subsequent dissolution of the sample due to the the ...

  12. Noncommutative gerbes and deformation quantization

    NASA Astrophysics Data System (ADS)

    Aschieri, Paolo; Baković, Igor; Jurčo, Branislav; Schupp, Peter

    2010-11-01

    We define noncommutative gerbes using the language of star products. Quantized twisted Poisson structures are discussed as an explicit realization in the sense of deformation quantization. Our motivation is the noncommutative description of D-branes in the presence of topologically non-trivial background fields.

  13. A visual detection model for DCT coefficient quantization

    NASA Technical Reports Server (NTRS)

    Ahumada, Albert J., Jr.; Watson, Andrew B.

    1994-01-01

    The discrete cosine transform (DCT) is widely used in image compression and is part of the JPEG and MPEG compression standards. The degree of compression and the amount of distortion in the decompressed image are controlled by the quantization of the transform coefficients. The standards do not specify how the DCT coefficients should be quantized. One approach is to set the quantization level for each coefficient so that the quantization error is near the threshold of visibility. Results from previous work are combined to form the current best detection model for DCT coefficient quantization noise. This model predicts sensitivity as a function of display parameters, enabling quantization matrices to be designed for display situations varying in luminance, veiling light, and spatial frequency related conditions (pixel size, viewing distance, and aspect ratio). It also allows arbitrary color space directions for the representation of color. A model-based method of optimizing the quantization matrix for an individual image was developed. The model described above provides visual thresholds for each DCT frequency. These thresholds are adjusted within each block for visual light adaptation and contrast masking. For given quantization matrix, the DCT quantization errors are scaled by the adjusted thresholds to yield perceptual errors. These errors are pooled nonlinearly over the image to yield total perceptual error. With this model one may estimate the quantization matrix for a particular image that yields minimum bit rate for a given total perceptual error, or minimum perceptual error for a given bit rate. Custom matrices for a number of images show clear improvement over image-independent matrices. Custom matrices are compatible with the JPEG standard, which requires transmission of the quantization matrix.

  14. Full Spectrum Conversion Using Traveling Pulse Wave Quantization

    DTIC Science & Technology

    2017-03-01

    Full Spectrum Conversion Using Traveling Pulse Wave Quantization Michael S. Kappes Mikko E. Waltari IQ-Analog Corporation San Diego, California...temporal-domain quantization technique called Traveling Pulse Wave Quantization (TPWQ). Full spectrum conversion is defined as the complete...pulse width measurements that are continuously generated hence the name “traveling” pulse wave quantization. Our TPWQ-based ADC is composed of a

  15. Dynamic Mechanical Properties of Bio-Polymer Graphite Thin Films

    NASA Astrophysics Data System (ADS)

    Saddam Kamarudin, M.; Rus, Anika Zafiah M.; Munirah Abdullah, Nur; Abdullah, M. F. L.

    2017-08-01

    Waste cooking oil is used as the main substances in producing graphite biopolymer thin films. Biopolymer is produce from the reaction of bio-monomer and cross linker with the ratio of 2:1 and addition of graphite with an increment of 2% through a slip casting method. The morphological surface properties of the samples are observed by using Scanning Electron Microscope (SEM). It is shown that the graphite particle is well mixed and homogenously dispersed in biopolymer matrix. Meanwhile, the mechanical response of materials by monitoring the change in the material properties in terms of frequency and temperature of the samples were determined using Dynamic Mechanical Analysis (DMA). The calculated cross-linked density of biopolymer composites revealed the increment of graphite particle loading at 8% gives highest results with 260.012 x 103 M/m3.

  16. Fabrication of Porous Materials from Natural/Synthetic Biopolymers and Their Composites.

    PubMed

    Sampath, Udeni Gunathilake T M; Ching, Yern Chee; Chuah, Cheng Hock; Sabariah, Johari J; Lin, Pai-Chen

    2016-12-07

    Biopolymers and their applications have been widely studied in recent years. Replacing the oil based polymer materials with biopolymers in a sustainable manner might give not only a competitive advantage but, in addition, they possess unique properties which cannot be emulated by conventional polymers. This review covers the fabrication of porous materials from natural biopolymers (cellulose, chitosan, collagen), synthetic biopolymers (poly(lactic acid), poly(lactic- co -glycolic acid)) and their composite materials. Properties of biopolymers strongly depend on the polymer structure and are of great importance when fabricating the polymer into intended applications. Biopolymers find a large spectrum of application in the medical field. Other fields such as packaging, technical, environmental, agricultural and food are also gaining importance. The introduction of porosity into a biomaterial broadens the scope of applications. There are many techniques used to fabricate porous polymers. Fabrication methods, including the basic and conventional techniques to the more recent ones, are reviewed. Advantages and limitations of each method are discussed in detail. Special emphasis is placed on the pore characteristics of biomaterials used for various applications. This review can aid in furthering our understanding of the fabrication methods and about controlling the porosity and microarchitecture of porous biopolymer materials.

  17. Fabrication of Porous Materials from Natural/Synthetic Biopolymers and Their Composites

    PubMed Central

    Sampath, Udeni Gunathilake T.M.; Ching, Yern Chee; Chuah, Cheng Hock; Sabariah, Johari J.; Lin, Pai-Chen

    2016-01-01

    Biopolymers and their applications have been widely studied in recent years. Replacing the oil based polymer materials with biopolymers in a sustainable manner might give not only a competitive advantage but, in addition, they possess unique properties which cannot be emulated by conventional polymers. This review covers the fabrication of porous materials from natural biopolymers (cellulose, chitosan, collagen), synthetic biopolymers (poly(lactic acid), poly(lactic-co-glycolic acid)) and their composite materials. Properties of biopolymers strongly depend on the polymer structure and are of great importance when fabricating the polymer into intended applications. Biopolymers find a large spectrum of application in the medical field. Other fields such as packaging, technical, environmental, agricultural and food are also gaining importance. The introduction of porosity into a biomaterial broadens the scope of applications. There are many techniques used to fabricate porous polymers. Fabrication methods, including the basic and conventional techniques to the more recent ones, are reviewed. Advantages and limitations of each method are discussed in detail. Special emphasis is placed on the pore characteristics of biomaterials used for various applications. This review can aid in furthering our understanding of the fabrication methods and about controlling the porosity and microarchitecture of porous biopolymer materials. PMID:28774113

  18. Coherent state quantization of quaternions

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Muraleetharan, B., E-mail: bbmuraleetharan@jfn.ac.lk, E-mail: santhar@gmail.com; Thirulogasanthar, K., E-mail: bbmuraleetharan@jfn.ac.lk, E-mail: santhar@gmail.com

    Parallel to the quantization of the complex plane, using the canonical coherent states of a right quaternionic Hilbert space, quaternion field of quaternionic quantum mechanics is quantized. Associated upper symbols, lower symbols, and related quantities are analyzed. Quaternionic version of the harmonic oscillator and Weyl-Heisenberg algebra are also obtained.

  19. Natural biopolymer-based nanocomposite films for packaging applications.

    PubMed

    Rhim, Jong-Whan; Ng, Perry K W

    2007-01-01

    Concerns on environmental waste problems caused by non-biodegradable petrochemical-based plastic packaging materials as well as the consumer's demand for high quality food products has caused an increasing interest in developing biodegradable packaging materials using annually renewable natural biopolymers such as polysaccharides and proteins. Inherent shortcomings of natural polymer-based packaging materials such as low mechanical properties and low water resistance can be recovered by applying a nanocomposite technology. Polymer nanocomposites, especially natural biopolymer-layered silicate nanocomposites, exhibit markedly improved packaging properties due to their nanometer size dispersion. These improvements include increased modulus and strength, decreased gas permeability, and increased water resistance. Additionally, biologically active ingredients can be added to impart the desired functional properties to the resulting packaging materials. Consequently, natural biopolymer-based nanocomposite packaging materials with bio-functional properties have a huge potential for application in the active food packaging industry. In this review, recent advances in the preparation of natural biopolymer-based films and their nanocomposites, and their potential use in packaging applications are addressed.

  20. BFV quantization on hermitian symmetric spaces

    NASA Astrophysics Data System (ADS)

    Fradkin, E. S.; Linetsky, V. Ya.

    1995-02-01

    Gauge-invariant BFV approach to geometric quantization is applied to the case of hermitian symmetric spaces G/ H. In particular, gauge invariant quantization on the Lobachevski plane and sphere is carried out. Due to the presence of symmetry, master equations for the first-class constraints, quantum observables and physical quantum states are exactly solvable. BFV-BRST operator defines a flat G-connection in the Fock bundle over G/ H. Physical quantum states are covariantly constant sections with respect to this connection and are shown to coincide with the generalized coherent states for the group G. Vacuum expectation values of the quantum observables commuting with the quantum first-class constraints reduce to the covariant symbols of Berezin. The gauge-invariant approach to quantization on symplectic manifolds synthesizes geometric, deformation and Berezin quantization approaches.

  1. A visual detection model for DCT coefficient quantization

    NASA Technical Reports Server (NTRS)

    Ahumada, Albert J., Jr.; Peterson, Heidi A.

    1993-01-01

    The discrete cosine transform (DCT) is widely used in image compression, and is part of the JPEG and MPEG compression standards. The degree of compression, and the amount of distortion in the decompressed image are determined by the quantization of the transform coefficients. The standards do not specify how the DCT coefficients should be quantized. Our approach is to set the quantization level for each coefficient so that the quantization error is at the threshold of visibility. Here we combine results from our previous work to form our current best detection model for DCT coefficient quantization noise. This model predicts sensitivity as a function of display parameters, enabling quantization matrices to be designed for display situations varying in luminance, veiling light, and spatial frequency related conditions (pixel size, viewing distance, and aspect ratio). It also allows arbitrary color space directions for the representation of color.

  2. Controlling charge quantization with quantum fluctuations.

    PubMed

    Jezouin, S; Iftikhar, Z; Anthore, A; Parmentier, F D; Gennser, U; Cavanna, A; Ouerghi, A; Levkivskyi, I P; Idrisov, E; Sukhorukov, E V; Glazman, L I; Pierre, F

    2016-08-04

    In 1909, Millikan showed that the charge of electrically isolated systems is quantized in units of the elementary electron charge e. Today, the persistence of charge quantization in small, weakly connected conductors allows for circuits in which single electrons are manipulated, with applications in, for example, metrology, detectors and thermometry. However, as the connection strength is increased, the discreteness of charge is progressively reduced by quantum fluctuations. Here we report the full quantum control and characterization of charge quantization. By using semiconductor-based tunable elemental conduction channels to connect a micrometre-scale metallic island to a circuit, we explore the complete evolution of charge quantization while scanning the entire range of connection strengths, from a very weak (tunnel) to a perfect (ballistic) contact. We observe, when approaching the ballistic limit, that charge quantization is destroyed by quantum fluctuations, and scales as the square root of the residual probability for an electron to be reflected across the quantum channel; this scaling also applies beyond the different regimes of connection strength currently accessible to theory. At increased temperatures, the thermal fluctuations result in an exponential suppression of charge quantization and in a universal square-root scaling, valid for all connection strengths, in agreement with expectations. Besides being pertinent for the improvement of single-electron circuits and their applications, and for the metal-semiconductor hybrids relevant to topological quantum computing, knowledge of the quantum laws of electricity will be essential for the quantum engineering of future nanoelectronic devices.

  3. Electrical, structural, thermal and electrochemical properties of corn starch-based biopolymer electrolytes.

    PubMed

    Liew, Chiam-Wen; Ramesh, S

    2015-06-25

    Biopolymer electrolytes containing corn starch, lithium hexafluorophosphate (LiPF6) and ionic liquid, 1-butyl-3-methylimidazolium hexafluorophosphate (BmImPF6) are prepared by solution casting technique. Temperature dependence-ionic conductivity studies reveal Vogel-Tamman-Fulcher (VTF) relationship which is associated with free volume theory. Ionic liquid-based biopolymer electrolytes show lower glass transition temperature (Tg) than ionic liquid-free biopolymer electrolyte. X-ray diffraction (XRD) studies demonstrate higher amorphous region of ionic liquid-added biopolymer electrolytes. In addition, the potential stability window of the biopolymer electrolyte becomes wider and stable up to 2.9V. Conclusively, the fabricated electric double layer capacitor (EDLC) shows improved electrochemical performance upon addition of ionic liquid into the biopolymer electrolyte. The specific capacitance of EDLC based on ionic liquid-added polymer electrolyte is relatively higher than that of ionic liquid-free polymer electrolyte as depicted in cyclic voltammogram. Copyright © 2015 Elsevier Ltd. All rights reserved.

  4. On the Dequantization of Fedosov's Deformation Quantization

    NASA Astrophysics Data System (ADS)

    Karabegov, Alexander V.

    2003-08-01

    To each natural deformation quantization on a Poisson manifold M we associate a Poisson morphism from the formal neighborhood of the zero section of the cotangent bundle to M to the formal neighborhood of the diagonal of the product M x M~, where M~ is a copy of M with the opposite Poisson structure. We call it dequantization of the natural deformation quantization. Then we "dequantize" Fedosov's quantization.

  5. Quantizing and sampling considerations in digital phased-locked loops

    NASA Technical Reports Server (NTRS)

    Hurst, G. T.; Gupta, S. C.

    1974-01-01

    The quantizer problem is first considered. The conditions under which the uniform white sequence model for the quantizer error is valid are established independent of the sampling rate. An equivalent spectral density is defined for the quantizer error resulting in an effective SNR value. This effective SNR may be used to determine quantized performance from infinitely fine quantized results. Attention is given to sampling rate considerations. Sampling rate characteristics of the digital phase-locked loop (DPLL) structure are investigated for the infinitely fine quantized system. The predicted phase error variance equation is examined as a function of the sampling rate. Simulation results are presented and a method is described which enables the minimum required sampling rate to be determined from the predicted phase error variance equations.

  6. A recursive technique for adaptive vector quantization

    NASA Technical Reports Server (NTRS)

    Lindsay, Robert A.

    1989-01-01

    Vector Quantization (VQ) is fast becoming an accepted, if not preferred method for image compression. The VQ performs well when compressing all types of imagery including Video, Electro-Optical (EO), Infrared (IR), Synthetic Aperture Radar (SAR), Multi-Spectral (MS), and digital map data. The only requirement is to change the codebook to switch the compressor from one image sensor to another. There are several approaches for designing codebooks for a vector quantizer. Adaptive Vector Quantization is a procedure that simultaneously designs codebooks as the data is being encoded or quantized. This is done by computing the centroid as a recursive moving average where the centroids move after every vector is encoded. When computing the centroid of a fixed set of vectors the resultant centroid is identical to the previous centroid calculation. This method of centroid calculation can be easily combined with VQ encoding techniques. The defined quantizer changes after every encoded vector by recursively updating the centroid of minimum distance which is the selected by the encoder. Since the quantizer is changing definition or states after every encoded vector, the decoder must now receive updates to the codebook. This is done as side information by multiplexing bits into the compressed source data.

  7. Biopolymers as transdermal drug delivery systems in dermatology therapy.

    PubMed

    Basavaraj, K H; Johnsy, George; Navya, M A; Rashmi, R; Siddaramaiah

    2010-01-01

    The skin is considered a complex organ for drug delivery because of its structure. Drug delivery systems are designed for the controlled release of drugs through the skin into the systemic circulation, maintaining consistent efficacy and reducing the dose of the drugs and their related side effects. Transdermal drug delivery represents one of the most rapidly advancing areas of novel drug delivery. The excellent impervious nature of the skin is the greatest challenge that must be overcome for successful drug delivery. Today, polymers have been proven to be successful for long-term drug delivery applications as no single polymer can satisfy all of the requirements. Biopolymers in the field of dermal application are rare and the mechanisms that affect skin absorption are almost unknown. Biopolymers are widely used as drug delivery systems, but as such the use of biopolymers as drug delivery systems in dermatologic therapy is still in progress. Commonly used biopolymers include hydrocolloids, alginates, hydrogels, polyurethane, collagen, poly(lactic-co-glycolic acid), chitosan, proteins and peptides, pectin, siRNAs, and hyaluronic acid. These new and exciting methods for drug delivery are already increasing the number and quality of dermal and transdermal therapies. This article reviews current research on biopolymers and focuses on their potential as drug carriers, particularly in relation to the dermatologic aspects of their use.

  8. Biopolymers to improve physical properties and leaching characteristics of mortar and concrete: A review

    NASA Astrophysics Data System (ADS)

    Olivia, M.; Jingga, H.; Toni, N.; Wibisono, G.

    2018-04-01

    The invention of environmentally friendly, high performance, and green material such as biopolymers marked an emerging trend for sustainable construction over the past decades. Biopolymer comprises of natural monomers and synthesized by plants or other organisms. The sustainable, biodegradable, and renewable biopolymers were used in concrete mixes to improve their physical and mechanical properties and durability. The aim of this paper is to provide a brief an overview of the impact of biopolymer addition into concrete and mortar mixes. Many studies on the influence of biopolymer on the properties of concrete and mortar by adding biopolymers at a certain proportion (usually less than one wt.%) to the concrete or mortar mixes, and the heavy metal leaching, rheological, and mechanical properties of the mixes were conducted. Biopolymers included in this review are chitosan (CH), xanthan gum (XG), guar gum (GG), lignosulphonate (LS), and cellulose ethers (CE). Data from previous studies showed that the addition of certain types of biopolymer into concrete and mortar mixes improve workability, water retention, and compressive strength by up to 30 percent. Chitosan strengthens heavy metal encapsulation in the mortar and neutralizes the negative impact of heavy metal on the mortar properties and environment. To sum up, the use of biopolymers improve physical properties and leaching characteristics of mortar and concrete.

  9. Quantized kernel least mean square algorithm.

    PubMed

    Chen, Badong; Zhao, Songlin; Zhu, Pingping; Príncipe, José C

    2012-01-01

    In this paper, we propose a quantization approach, as an alternative of sparsification, to curb the growth of the radial basis function structure in kernel adaptive filtering. The basic idea behind this method is to quantize and hence compress the input (or feature) space. Different from sparsification, the new approach uses the "redundant" data to update the coefficient of the closest center. In particular, a quantized kernel least mean square (QKLMS) algorithm is developed, which is based on a simple online vector quantization method. The analytical study of the mean square convergence has been carried out. The energy conservation relation for QKLMS is established, and on this basis we arrive at a sufficient condition for mean square convergence, and a lower and upper bound on the theoretical value of the steady-state excess mean square error. Static function estimation and short-term chaotic time-series prediction examples are presented to demonstrate the excellent performance.

  10. Quantization of Non-Lagrangian Systems

    NASA Astrophysics Data System (ADS)

    Kochan, Denis

    A novel method for quantization of non-Lagrangian (open) systems is proposed. It is argued that the essential object, which provides both classical and quantum evolution, is a certain canonical two-form defined in extended velocity space. In this setting classical dynamics is recovered from the stringy-type variational principle, which employs umbilical surfaces instead of histories of the system. Quantization is then accomplished in accordance with the introduced variational principle. The path integral for the transition probability amplitude (propagator) is rearranged to a surface functional integral. In the standard case of closed (Lagrangian) systems the presented method reduces to the standard Feynman's approach. The inverse problem of the calculus of variation, the problem of quantization ambiguity and the quantum mechanics in the presence of friction are analyzed in detail.

  11. USING BIOPOLYMERS TO REMOVE HEAVY METALS FROM SOIL AND WATER

    EPA Science Inventory

    Chemical remediation of soils may involve the use of harsh chemicals that generate waste streams and may adversely affect the soil's integrity and ability to support vegetation. his paper reviews the promise of benign reagents such as biopolymers to extract metals. he biopolymers...

  12. Micro-heterogeneity of Cellulosic Fiber Biopolymer Prepared from Corn Hulls

    USDA-ARS?s Scientific Manuscript database

    Z-trim is a zero calorie cellulosic fiber biopolymer produced from corn hulls. The micro-structural heterogeneities of Z-trim biopolymer were investigated by monitoring the thermally driven displacements of well-dispersed micro-spheres via video fluorescence microscopy named multiple-particle track...

  13. Micro-Heterogeneity of Cellulosic Fiber Biopolymer Prepared from Corn Hulls

    USDA-ARS?s Scientific Manuscript database

    Z-trim is a zero calorie cellulosic fiber biopolymer produced from corn hulls. The micro-structural heterogeneities of Z-trim biopolymer were investigated by monitoring the thermally driven displacements of well-dispersed micro-spheres via video fluorescence microscopy named multiple-particle track...

  14. Biopolymers for Sample Collection, Protection, and Preservation

    DTIC Science & Technology

    2015-05-19

    biopolymer. The cured polymer results in a solid protective film that is stable to many organic solvents, but quickly removed by the application of the water...the biopolymer. The cured polymer results in a solid protective film that is stable to many organic solvents, but quickly removed by the appli- cation...frozen after that. RNAlater® has been demonstrated to Ta bl e 1 C om pa ri so n of ce ll an d nu cl ei c ac id pr es er va tio n te ch ni qu es Sy st

  15. Robust vector quantization for noisy channels

    NASA Technical Reports Server (NTRS)

    Demarca, J. R. B.; Farvardin, N.; Jayant, N. S.; Shoham, Y.

    1988-01-01

    The paper briefly discusses techniques for making vector quantizers more tolerant to tranmsission errors. Two algorithms are presented for obtaining an efficient binary word assignment to the vector quantizer codewords without increasing the transmission rate. It is shown that about 4.5 dB gain over random assignment can be achieved with these algorithms. It is also proposed to reduce the effects of error propagation in vector-predictive quantizers by appropriately constraining the response of the predictive loop. The constrained system is shown to have about 4 dB of SNR gain over an unconstrained system in a noisy channel, with a small loss of clean-channel performance.

  16. Imperfection sensitivity of pressured buckling of biopolymer spherical shells

    NASA Astrophysics Data System (ADS)

    Zhang, Lei; Ru, C. Q.

    2016-06-01

    Imperfection sensitivity is essential for mechanical behavior of biopolymer shells [such as ultrasound contrast agents (UCAs) and spherical viruses] characterized by high geometric heterogeneity. In this work, an imperfection sensitivity analysis is conducted based on a refined shell model recently developed for spherical biopolymer shells of high structural heterogeneity and thickness nonuniformity. The influence of related parameters (including the ratio of radius to average shell thickness, the ratio of transverse shear modulus to in-plane shear modulus, and the ratio of effective bending thickness to average shell thickness) on imperfection sensitivity is examined for pressured buckling. Our results show that the ratio of effective bending thickness to average shell thickness has a major effect on the imperfection sensitivity, while the effect of the ratio of transverse shear modulus to in-plane shear modulus is usually negligible. For example, with physically realistic parameters for typical imperfect spherical biopolymer shells, the present model predicts that actual maximum external pressure could be reduced to as low as 60% of that of a perfect UCA spherical shell or 55%-65% of that of a perfect spherical virus shell, respectively. The moderate imperfection sensitivity of spherical biopolymer shells with physically realistic imperfection is largely attributed to the fact that biopolymer shells are relatively thicker (defined by smaller radius-to-thickness ratio) and therefore practically realistic imperfection amplitude normalized by thickness is very small as compared to that of classical elastic thin shells which have much larger radius-to-thickness ratio.

  17. Designing biopolymer microgels to encapsulate, protect and deliver bioactive components: Physicochemical aspects.

    PubMed

    McClements, David Julian

    2017-02-01

    Biopolymer microgels have considerable potential for their ability to encapsulate, protect, and release bioactive components. Biopolymer microgels are small particles (typically 100nm to 1000μm) whose interior consists of a three-dimensional network of cross-linked biopolymer molecules that traps a considerable amount of solvent. This type of particle is also sometimes referred to as a nanogel, hydrogel bead, biopolymer particles, or microsphere. Biopolymer microgels are typically prepared using a two-step process involving particle formation and particle gelation. This article reviews the major constituents and fabrication methods that can be used to prepare microgels, highlighting their advantages and disadvantages. It then provides an overview of the most important characteristics of microgel particles (such as size, shape, structure, composition, and electrical properties), and describes how these parameters can be manipulated to control the physicochemical properties and functional attributes of microgel suspensions (such as appearance, stability, rheology, and release profiles). Finally, recent examples of the utilization of biopolymer microgels to encapsulate, protect, or release bioactive agents, such as pharmaceuticals, nutraceuticals, enzymes, flavors, and probiotics is given. Copyright © 2016 Elsevier B.V. All rights reserved.

  18. Natural inflation from polymer quantization

    NASA Astrophysics Data System (ADS)

    Ali, Masooma; Seahra, Sanjeev S.

    2017-11-01

    We study the polymer quantization of a homogeneous massive scalar field in the early Universe using a prescription inequivalent to those previously appearing in the literature. Specifically, we assume a Hilbert space for which the scalar field momentum is well defined but its amplitude is not. This is closer in spirit to the quantization scheme of loop quantum gravity, in which no unique configuration operator exists. We show that in the semiclassical approximation, the main effect of this polymer quantization scheme is to compactify the phase space of chaotic inflation in the field amplitude direction. This gives rise to an effective scalar potential closely resembling that of hybrid natural inflation. Unlike polymer schemes in which the scalar field amplitude is well defined, the semiclassical dynamics involves a past cosmological singularity; i.e., this approach does not mitigate the big bang.

  19. Pseudo-Kähler Quantization on Flag Manifolds

    NASA Astrophysics Data System (ADS)

    Karabegov, Alexander V.

    A unified approach to geometric, symbol and deformation quantizations on a generalized flag manifold endowed with an invariant pseudo-Kähler structure is proposed. In particular cases we arrive at Berezin's quantization via covariant and contravariant symbols.

  20. Quantization of Electromagnetic Fields in Cavities

    NASA Technical Reports Server (NTRS)

    Kakazu, Kiyotaka; Oshiro, Kazunori

    1996-01-01

    A quantization procedure for the electromagnetic field in a rectangular cavity with perfect conductor walls is presented, where a decomposition formula of the field plays an essential role. All vector mode functions are obtained by using the decomposition. After expanding the field in terms of the vector mode functions, we get the quantized electromagnetic Hamiltonian.

  1. Low-rate image coding using vector quantization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Makur, A.

    1990-01-01

    This thesis deals with the development and analysis of a computationally simple vector quantization image compression system for coding monochrome images at low bit rate. Vector quantization has been known to be an effective compression scheme when a low bit rate is desirable, but the intensive computation required in a vector quantization encoder has been a handicap in using it for low rate image coding. The present work shows that, without substantially increasing the coder complexity, it is indeed possible to achieve acceptable picture quality while attaining a high compression ratio. Several modifications to the conventional vector quantization coder aremore » proposed in the thesis. These modifications are shown to offer better subjective quality when compared to the basic coder. Distributed blocks are used instead of spatial blocks to construct the input vectors. A class of input-dependent weighted distortion functions is used to incorporate psychovisual characteristics in the distortion measure. Computationally simple filtering techniques are applied to further improve the decoded image quality. Finally, unique designs of the vector quantization coder using electronic neural networks are described, so that the coding delay is reduced considerably.« less

  2. Tribology of the lubricant quantized sliding state.

    PubMed

    Castelli, Ivano Eligio; Capozza, Rosario; Vanossi, Andrea; Santoro, Giuseppe E; Manini, Nicola; Tosatti, Erio

    2009-11-07

    In the framework of Langevin dynamics, we demonstrate clear evidence of the peculiar quantized sliding state, previously found in a simple one-dimensional boundary lubricated model [A. Vanossi et al., Phys. Rev. Lett. 97, 056101 (2006)], for a substantially less idealized two-dimensional description of a confined multilayer solid lubricant under shear. This dynamical state, marked by a nontrivial "quantized" ratio of the averaged lubricant center-of-mass velocity to the externally imposed sliding speed, is recovered, and shown to be robust against the effects of thermal fluctuations, quenched disorder in the confining substrates, and over a wide range of loading forces. The lubricant softness, setting the width of the propagating solitonic structures, is found to play a major role in promoting in-registry commensurate regions beneficial to this quantized sliding. By evaluating the force instantaneously exerted on the top plate, we find that this quantized sliding represents a dynamical "pinned" state, characterized by significantly low values of the kinetic friction. While the quantized sliding occurs due to solitons being driven gently, the transition to ordinary unpinned sliding regimes can involve lubricant melting due to large shear-induced Joule heating, for example at large speed.

  3. Post-buckling of a pressured biopolymer spherical shell with the mode interaction

    NASA Astrophysics Data System (ADS)

    Zhang, Lei; Ru, C. Q.

    2018-03-01

    Imperfection sensitivity is essential for mechanical behaviour of biopolymer shells characterized by high geometric heterogeneity. The present work studies initial post-buckling and imperfection sensitivity of a pressured biopolymer spherical shell based on non-axisymmetric buckling modes and associated mode interaction. Our results indicate that for biopolymer spherical shells with moderate radius-to-thickness ratio (say, less than 30) and smaller effective bending thickness (say, less than 0.2 times average shell thickness), the imperfection sensitivity predicted based on the axisymmetric mode without the mode interaction is close to the present results based on non-axisymmetric modes with the mode interaction with a small (typically, less than 10%) relative errors. However, for biopolymer spherical shells with larger effective bending thickness, the maximum load an imperfect shell can sustain predicted by the present non-axisymmetric analysis can be significantly (typically, around 30%) lower than those predicted based on the axisymmetric mode without the mode interaction. In such cases, a more accurate non-axisymmetric analysis with the mode interaction, as given in the present work, is required for imperfection sensitivity of pressured buckling of biopolymer spherical shells. Finally, the implications of the present study to two specific types of biopolymer spherical shells (viral capsids and ultrasound contrast agents) are discussed.

  4. Image Coding Based on Address Vector Quantization.

    NASA Astrophysics Data System (ADS)

    Feng, Yushu

    Image coding is finding increased application in teleconferencing, archiving, and remote sensing. This thesis investigates the potential of Vector Quantization (VQ), a relatively new source coding technique, for compression of monochromatic and color images. Extensions of the Vector Quantization technique to the Address Vector Quantization method have been investigated. In Vector Quantization, the image data to be encoded are first processed to yield a set of vectors. A codeword from the codebook which best matches the input image vector is then selected. Compression is achieved by replacing the image vector with the index of the code-word which produced the best match, the index is sent to the channel. Reconstruction of the image is done by using a table lookup technique, where the label is simply used as an address for a table containing the representative vectors. A code-book of representative vectors (codewords) is generated using an iterative clustering algorithm such as K-means, or the generalized Lloyd algorithm. A review of different Vector Quantization techniques are given in chapter 1. Chapter 2 gives an overview of codebook design methods including the Kohonen neural network to design codebook. During the encoding process, the correlation of the address is considered and Address Vector Quantization is developed for color image and monochrome image coding. Address VQ which includes static and dynamic processes is introduced in chapter 3. In order to overcome the problems in Hierarchical VQ, Multi-layer Address Vector Quantization is proposed in chapter 4. This approach gives the same performance as that of the normal VQ scheme but the bit rate is about 1/2 to 1/3 as that of the normal VQ method. In chapter 5, a Dynamic Finite State VQ based on a probability transition matrix to select the best subcodebook to encode the image is developed. In chapter 6, a new adaptive vector quantization scheme, suitable for color video coding, called "A Self -Organizing

  5. Water desorption from a confined biopolymer.

    PubMed

    Pradipkanti, L; Satapathy, Dillip K

    2018-03-14

    We study desorption of water from a confined biopolymer (chitosan thin films) by employing temperature dependent specular X-ray reflectivity and spectroscopic ellipsometry. The water desorption is found to occur via three distinct stages with significantly different desorption rates. The distinct rates of water desorption are attributed to the presence of different kinds of water with disparate mobilities inside the biopolymer film. We identify two characteristic temperatures (T c1 and T c2 ) at which the water desorption rate changes abruptly. Interestingly, the characteristic temperatures decrease with decreasing the film thickness. The thickness dependence of the characteristic temperature is interpreted in the context of a higher mobility of polymer chains at the free surface for polymers under one-dimensional confinement.

  6. Biopolymer Green Lubricant for Sustainable Manufacturing

    PubMed Central

    Shi, Shih-Chen; Lu, Fu-I

    2016-01-01

    We report on the preparation of a biopolymer thin film by hydroxypropyl methylcellulose (HPMC), which can be used as a dry green lubricant in sustainable manufacturing. The thin films were characterized through scanning electron microscopy, energy-dispersive spectroscopy, and Raman spectroscopy; the films showed desirable levels of thickness, controllability, and uniformity. Tribology tests also showed desirable tribological and antiwear behaviors, caused by the formation of transfer layers. Zebrafish embryo toxicity studies showed that HPMC has excellent solubility and biocompatibility, which may show outstanding potential for applications as a green lubricant. The results of the present study show that these techniques for biopolymer HPMC provide an ecologically responsible and convenient method for preparing functional thin films, which is particularly applicable to sustainable manufacturing. PMID:28773462

  7. Quantization of simple parametrized systems

    NASA Astrophysics Data System (ADS)

    Ruffini, G.

    2005-11-01

    I study the canonical formulation and quantization of some simple parametrized systems, including the non-relativistic parametrized particle and the relativistic parametrized particle. Using Dirac's formalism I construct for each case the classical reduced phase space and study the dependence on the gauge fixing used. Two separate features of these systems can make this construction difficult: the actions are not invariant at the boundaries, and the constraints may have disconnected solution spaces. The relativistic particle is affected by both, while the non-relativistic particle displays only by the first. Analyzing the role of canonical transformations in the reduced phase space, I show that a change of gauge fixing is equivalent to a canonical transformation. In the relativistic case, quantization of one branch of the constraint at the time is applied and I analyze the electromagenetic backgrounds in which it is possible to quantize simultaneously both branches and still obtain a covariant unitary quantum theory. To preserve unitarity and space-time covariance, second quantization is needed unless there is no electric field. I motivate a definition of the inner product in all these cases and derive the Klein-Gordon inner product for the relativistic case. I construct phase space path integral representations for amplitudes for the BFV and the Faddeev path integrals, from which the path integrals in coordinate space (Faddeev-Popov and geometric path integrals) are derived.

  8. Are biopolymers potential deodourising agents in wound management?

    PubMed

    Lee, G; Anand, S C; Rajendran, S

    2009-07-01

    To investigate the odour-adsorbing properties of biopolymers, with a view to using the findings to develop a novel dressing with odour-adsorbing properties. The odour-adsorbing properties of a selection of biopolymers (aloe vera, tea tree oil, neem oil and manuka honey) and three commercially available dressings containing activated charcoal cloth (ACC) were quantitatively assessed using laboratory test equipment. An aloe vera-containing composite dressing, designed and developed by the authors, was also compared with the ACC dressings. Aloe vera was the most adsorbent of the biopolymers and a 40% dilution had comparable values to those of the ACC dressings. Furthermore, values for the novel composite dressing were similar to those of the ACC dressings. The novel composite dressing may be a potential alternative to ACC dressings, and has the added advantages of having antimicrobial properties as well as the ability to promote a moist wound environment. However, more research is needed.

  9. Gravitational surface Hamiltonian and entropy quantization

    NASA Astrophysics Data System (ADS)

    Bakshi, Ashish; Majhi, Bibhas Ranjan; Samanta, Saurav

    2017-02-01

    The surface Hamiltonian corresponding to the surface part of a gravitational action has xp structure where p is conjugate momentum of x. Moreover, it leads to TS on the horizon of a black hole. Here T and S are temperature and entropy of the horizon. Imposing the hermiticity condition we quantize this Hamiltonian. This leads to an equidistant spectrum of its eigenvalues. Using this we show that the entropy of the horizon is quantized. This analysis holds for any order of Lanczos-Lovelock gravity. For general relativity, the area spectrum is consistent with Bekenstein's observation. This provides a more robust confirmation of this earlier result as the calculation is based on the direct quantization of the Hamiltonian in the sense of usual quantum mechanics.

  10. Novel Task Functionalized Biopolymers for Enhanced Change Detection in Support of C-IED Operations

    DTIC Science & Technology

    2013-04-15

    biopolymer was tested. All materials tested, PAM, chitin , the native biopolymer, and the MU conjugated biopolymer, were applied in small soil plots...phaseoli Strain 127 K36. Carbohydr. Res. 117, 141-156. EPA. 2001. Chitin ; Poly-N-acetyl-D-glucosamine (128991) Fact Sheet. USEPA Fact Sheet

  11. Sustainably Sourced, Thermally Resistant, Radiation Hard Biopolymer

    NASA Technical Reports Server (NTRS)

    Pugel, Diane

    2011-01-01

    This material represents a breakthrough in the production, manufacturing, and application of thermal protection system (TPS) materials and radiation shielding, as this represents the first effort to develop a non-metallic, non-ceramic, biomaterial-based, sustainable TPS with the capability to also act as radiation shielding. Until now, the standing philosophy for radiation shielding involved carrying the shielding at liftoff or utilizing onboard water sources. This shielding material could be grown onboard and applied as needed prior to different radiation landscapes (commonly seen during missions involving gravitational assists). The material is a bioplastic material. Bioplastics are any combination of a biopolymer and a plasticizer. In this case, the biopolymer is a starch-based material and a commonly accessible plasticizer. Starch molecules are composed of two major polymers: amylase and amylopectin. The biopolymer phenolic compounds are common to the ablative thermal protection system family of materials. With similar constituents come similar chemical ablation processes, with the potential to have comparable, if not better, ablation characteristics. It can also be used as a flame-resistant barrier for commercial applications in buildings, homes, cars, and heater firewall material. The biopolymer is observed to undergo chemical transformations (oxidative and structural degradation) at radiation doses that are 1,000 times the maximum dose of an unmanned mission (10-25 Mrad), indicating that it would be a viable candidate for robust radiation shielding. As a comparison, the total integrated radiation dose for a three-year manned mission to Mars is 0.1 krad, far below the radiation limit at which starch molecules degrade. For electron radiation, the biopolymer starches show minimal deterioration when exposed to energies greater than 180 keV. This flame-resistant, thermal-insulating material is non-hazardous and may be sustainably sourced. It poses no hazardous

  12. Stress and translocation: alterations in the stress physiology of translocated birds

    PubMed Central

    Dickens, Molly J.; Delehanty, David J.; Romero, L. Michael

    2009-01-01

    Translocation and reintroduction have become major conservation actions in attempts to create self-sustaining wild populations of threatened species. However, avian translocations have a high failure rate and causes for failure are poorly understood. While ‘stress’ is often cited as an important factor in translocation failure, empirical evidence of physiological stress is lacking. Here we show that experimental translocation leads to changes in the physiological stress response in chukar partridge, Alectoris chukar. We found that capture alone significantly decreased the acute glucocorticoid (corticosterone, CORT) response, but adding exposure to captivity and transport further altered the stress response axis (the hypothalamic–pituitary–adrenal axis) as evident from a decreased sensitivity of the negative feedback system. Animals that were exposed to the entire translocation procedure, in addition to the reduced acute stress response and disrupted negative feedback, had significantly lower baseline CORT concentrations and significantly reduced body weight. These data indicate that translocation alters stress physiology and that chronic stress is potentially a major factor in translocation failure. Under current practices, the restoration of threatened species through translocation may unwittingly depend on the success of chronically stressed individuals. This conclusion emphasizes the need for understanding and alleviating translocation-induced chronic stress in order to use most effectively this important conservation tool. PMID:19324794

  13. Polymer-Fourier quantization of the scalar field revisited

    NASA Astrophysics Data System (ADS)

    Garcia-Chung, Angel; Vergara, J. David

    2016-10-01

    The polymer quantization of the Fourier modes of the real scalar field is studied within algebraic scheme. We replace the positive linear functional of the standard Poincaré invariant quantization by a singular one. This singular positive linear functional is constructed as mimicking the singular limit of the complex structure of the Poincaré invariant Fock quantization. The resulting symmetry group of such polymer quantization is the subgroup SDiff(ℝ4) which is a subgroup of Diff(ℝ4) formed by spatial volume preserving diffeomorphisms. In consequence, this yields an entirely different irreducible representation of the canonical commutation relations, nonunitary equivalent to the standard Fock representation. We also compared the Poincaré invariant Fock vacuum with the polymer Fourier vacuum.

  14. Video data compression using artificial neural network differential vector quantization

    NASA Technical Reports Server (NTRS)

    Krishnamurthy, Ashok K.; Bibyk, Steven B.; Ahalt, Stanley C.

    1991-01-01

    An artificial neural network vector quantizer is developed for use in data compression applications such as Digital Video. Differential Vector Quantization is used to preserve edge features, and a new adaptive algorithm, known as Frequency-Sensitive Competitive Learning, is used to develop the vector quantizer codebook. To develop real time performance, a custom Very Large Scale Integration Application Specific Integrated Circuit (VLSI ASIC) is being developed to realize the associative memory functions needed in the vector quantization algorithm. By using vector quantization, the need for Huffman coding can be eliminated, resulting in superior performance against channel bit errors than methods that use variable length codes.

  15. Instabilities caused by floating-point arithmetic quantization.

    NASA Technical Reports Server (NTRS)

    Phillips, C. L.

    1972-01-01

    It is shown that an otherwise stable digital control system can be made unstable by signal quantization when the controller operates on floating-point arithmetic. Sufficient conditions of instability are determined, and an example of loss of stability is treated when only one quantizer is operated.

  16. Topologies on quantum topoi induced by quantization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nakayama, Kunji

    2013-07-15

    In the present paper, we consider effects of quantization in a topos approach of quantum theory. A quantum system is assumed to be coded in a quantum topos, by which we mean the topos of presheaves on the context category of commutative subalgebras of a von Neumann algebra of bounded operators on a Hilbert space. A classical system is modeled by a Lie algebra of classical observables. It is shown that a quantization map from the classical observables to self-adjoint operators on the Hilbert space naturally induces geometric morphisms from presheaf topoi related to the classical system to the quantummore » topos. By means of the geometric morphisms, we give Lawvere-Tierney topologies on the quantum topos (and their equivalent Grothendieck topologies on the context category). We show that, among them, there exists a canonical one which we call a quantization topology. We furthermore give an explicit expression of a sheafification functor associated with the quantization topology.« less

  17. Topological quantization in units of the fine structure constant.

    PubMed

    Maciejko, Joseph; Qi, Xiao-Liang; Drew, H Dennis; Zhang, Shou-Cheng

    2010-10-15

    Fundamental topological phenomena in condensed matter physics are associated with a quantized electromagnetic response in units of fundamental constants. Recently, it has been predicted theoretically that the time-reversal invariant topological insulator in three dimensions exhibits a topological magnetoelectric effect quantized in units of the fine structure constant α=e²/ℏc. In this Letter, we propose an optical experiment to directly measure this topological quantization phenomenon, independent of material details. Our proposal also provides a way to measure the half-quantized Hall conductances on the two surfaces of the topological insulator independently of each other.

  18. Quantization improves stabilization of dynamical systems with delayed feedback

    NASA Astrophysics Data System (ADS)

    Stepan, Gabor; Milton, John G.; Insperger, Tamas

    2017-11-01

    We show that an unstable scalar dynamical system with time-delayed feedback can be stabilized by quantizing the feedback. The discrete time model corresponds to a previously unrecognized case of the microchaotic map in which the fixed point is both locally and globally repelling. In the continuous-time model, stabilization by quantization is possible when the fixed point in the absence of feedback is an unstable node, and in the presence of feedback, it is an unstable focus (spiral). The results are illustrated with numerical simulation of the unstable Hayes equation. The solutions of the quantized Hayes equation take the form of oscillations in which the amplitude is a function of the size of the quantization step. If the quantization step is sufficiently small, the amplitude of the oscillations can be small enough to practically approximate the dynamics around a stable fixed point.

  19. Dimensional quantization effects in the thermodynamics of conductive filaments

    NASA Astrophysics Data System (ADS)

    Niraula, D.; Grice, C. R.; Karpov, V. G.

    2018-06-01

    We consider the physical effects of dimensional quantization in conductive filaments that underlie operations of some modern electronic devices. We show that, as a result of quantization, a sufficiently thin filament acquires a positive charge. Several applications of this finding include the host material polarization, the stability of filament constrictions, the equilibrium filament radius, polarity in device switching, and quantization of conductance.

  20. Dimensional quantization effects in the thermodynamics of conductive filaments.

    PubMed

    Niraula, D; Grice, C R; Karpov, V G

    2018-06-29

    We consider the physical effects of dimensional quantization in conductive filaments that underlie operations of some modern electronic devices. We show that, as a result of quantization, a sufficiently thin filament acquires a positive charge. Several applications of this finding include the host material polarization, the stability of filament constrictions, the equilibrium filament radius, polarity in device switching, and quantization of conductance.

  1. Gauge fixing and BFV quantization

    NASA Astrophysics Data System (ADS)

    Rogers, Alice

    2000-01-01

    Non-singularity conditions are established for the Batalin-Fradkin-Vilkovisky (BFV) gauge-fixing fermion which are sufficient for it to lead to the correct path integral for a theory with constraints canonically quantized in the BFV approach. The conditions ensure that the anticommutator of this fermion with the BRST charge regularizes the path integral by regularizing the trace over non-physical states in each ghost sector. The results are applied to the quantization of a system which has a Gribov problem, using a non-standard form of the gauge-fixing fermion.

  2. Thermal field theory and generalized light front quantization

    NASA Astrophysics Data System (ADS)

    Weldon, H. Arthur

    2003-04-01

    The dependence of thermal field theory on the surface of quantization and on the velocity of the heat bath is investigated by working in general coordinates that are arbitrary linear combinations of the Minkowski coordinates. In the general coordinates the metric tensor gμν¯ is nondiagonal. The Kubo-Martin-Schwinger condition requires periodicity in thermal correlation functions when the temporal variable changes by an amount -i/(T(g00¯)). Light-front quantization fails since g00¯=0; however, various related quantizations are possible.

  3. Biopolymers and supramolecular polymers as biomaterials for biomedical applications

    PubMed Central

    Freeman, Ronit; Boekhoven, Job; Dickerson, Matthew B.; Naik, Rajesh R.

    2015-01-01

    Protein- and peptide-based structural biopolymers are abundant building blocks of biological systems. Either in their natural forms, such as collagen, silk or fibronectin, or as related synthetic materials they can be used in various technologies. An emerging area is that of biomimetic materials inspired by protein-based biopolymers, which are made up of small molecules rather than macromolecules and can therefore be described as supramolecular polymers. These materials are very useful in biomedical applications because of their ability to imitate the extracellular matrix both in architecture and their capacity to signal cells. This article describes important features of the natural extracellular matrix and highlight how these features are being incorporated into biomaterials composed of biopolymers and supramolecular polymers. We particularly focus on the structures, properties, and functions of collagen, fibronectin, silk, and the supramolecular polymers inspired by them as biomaterials for regenerative medicine. PMID:26989295

  4. Biopolymer-Based Nanoparticles for Drug/Gene Delivery and Tissue Engineering

    PubMed Central

    Nitta, Sachiko Kaihara; Numata, Keiji

    2013-01-01

    There has been a great interest in application of nanoparticles as biomaterials for delivery of therapeutic molecules such as drugs and genes, and for tissue engineering. In particular, biopolymers are suitable materials as nanoparticles for clinical application due to their versatile traits, including biocompatibility, biodegradability and low immunogenicity. Biopolymers are polymers that are produced from living organisms, which are classified in three groups: polysaccharides, proteins and nucleic acids. It is important to control particle size, charge, morphology of surface and release rate of loaded molecules to use biopolymer-based nanoparticles as drug/gene delivery carriers. To obtain a nano-carrier for therapeutic purposes, a variety of materials and preparation process has been attempted. This review focuses on fabrication of biocompatible nanoparticles consisting of biopolymers such as protein (silk, collagen, gelatin, β-casein, zein and albumin), protein-mimicked polypeptides and polysaccharides (chitosan, alginate, pullulan, starch and heparin). The effects of the nature of the materials and the fabrication process on the characteristics of the nanoparticles are described. In addition, their application as delivery carriers of therapeutic drugs and genes and biomaterials for tissue engineering are also reviewed. PMID:23344060

  5. Probabilistic distance-based quantizer design for distributed estimation

    NASA Astrophysics Data System (ADS)

    Kim, Yoon Hak

    2016-12-01

    We consider an iterative design of independently operating local quantizers at nodes that should cooperate without interaction to achieve application objectives for distributed estimation systems. We suggest as a new cost function a probabilistic distance between the posterior distribution and its quantized one expressed as the Kullback Leibler (KL) divergence. We first present the analysis that minimizing the KL divergence in the cyclic generalized Lloyd design framework is equivalent to maximizing the logarithmic quantized posterior distribution on the average which can be further computationally reduced in our iterative design. We propose an iterative design algorithm that seeks to maximize the simplified version of the posterior quantized distribution and discuss that our algorithm converges to a global optimum due to the convexity of the cost function and generates the most informative quantized measurements. We also provide an independent encoding technique that enables minimization of the cost function and can be efficiently simplified for a practical use of power-constrained nodes. We finally demonstrate through extensive experiments an obvious advantage of improved estimation performance as compared with the typical designs and the novel design techniques previously published.

  6. Relational symplectic groupoid quantization for constant poisson structures

    NASA Astrophysics Data System (ADS)

    Cattaneo, Alberto S.; Moshayedi, Nima; Wernli, Konstantin

    2017-09-01

    As a detailed application of the BV-BFV formalism for the quantization of field theories on manifolds with boundary, this note describes a quantization of the relational symplectic groupoid for a constant Poisson structure. The presence of mixed boundary conditions and the globalization of results are also addressed. In particular, the paper includes an extension to space-times with boundary of some formal geometry considerations in the BV-BFV formalism, and specifically introduces into the BV-BFV framework a "differential" version of the classical and quantum master equations. The quantization constructed in this paper induces Kontsevich's deformation quantization on the underlying Poisson manifold, i.e., the Moyal product, which is known in full details. This allows focussing on the BV-BFV technology and testing it. For the inexperienced reader, this is also a practical and reasonably simple way to learn it.

  7. Quantization Distortion in Block Transform-Compressed Data

    NASA Technical Reports Server (NTRS)

    Boden, A. F.

    1995-01-01

    The popular JPEG image compression standard is an example of a block transform-based compression scheme; the image is systematically subdivided into block that are individually transformed, quantized, and encoded. The compression is achieved by quantizing the transformed data, reducing the data entropy and thus facilitating efficient encoding. A generic block transform model is introduced.

  8. In vitro assessment of biopolymer-modified porous silicon microparticles for wound healing applications.

    PubMed

    Mori, Michela; Almeida, Patrick V; Cola, Michela; Anselmi, Giulia; Mäkilä, Ermei; Correia, Alexandra; Salonen, Jarno; Hirvonen, Jouni; Caramella, Carla; Santos, Hélder A

    2014-11-01

    The wound healing stands as very complex and dynamic process, aiming the re-establishment of the damaged tissue's integrity and functionality. Thus, there is an emerging need for developing biopolymer-based composites capable of actively promoting cellular proliferation and reconstituting the extracellular matrix. The aims of the present work were to prepare and characterize biopolymer-functionalized porous silicon (PSi) microparticles, resulting in the development of drug delivery microsystems for future applications in wound healing. Thermally hydrocarbonized PSi (THCPSi) microparticles were coated with both chitosan and a mixture of chondroitin sulfate/hyaluronic acid, and subsequently loaded with two antibacterial model drugs, vancomycin and resveratrol. The biopolymer coating, drug loading degree and drug release behavior of the modified PSi microparticles were evaluated in vitro. The results showed that both the biopolymer coating and drug loading of the THCPSi microparticles were successfully achieved. In addition, a sustained release was observed for both the drugs tested. The viability and proliferation profiles of a fibroblast cell line exposed to the modified THCPSi microparticles and the subsequent reactive oxygen species (ROS) production were also evaluated. The cytotoxicity and proliferation results demonstrated less toxicity for the biopolymer-coated THCPSi microparticles at different concentrations and time points comparatively to the uncoated counterparts. The ROS production by the fibroblasts exposed to both uncoated and biopolymer-coated PSi microparticles showed that the modified PSi microparticles did not induce significant ROS production at the concentrations tested. Overall, the biopolymer-based PSi microparticles developed in this study are promising platforms for wound healing applications. Copyright © 2014 Elsevier B.V. All rights reserved.

  9. Instant-Form and Light-Front Quantization of Field Theories

    NASA Astrophysics Data System (ADS)

    Kulshreshtha, Usha; Kulshreshtha, Daya Shankar; Vary, James

    2018-05-01

    In this work we consider the instant-form and light-front quantization of some field theories. As an example, we consider a class of gauged non-linear sigma models with different regularizations. In particular, we present the path integral quantization of the gauged non-linear sigma model in the Faddeevian regularization. We also make a comparision of the possible differences in the instant-form and light-front quantization at appropriate places.

  10. Recent progress in biopolymer nanoparticle and microparticle formation by heat-treating electrostatic protein-polysaccharide complexes.

    PubMed

    Jones, Owen G; McClements, David Julian

    2011-09-14

    Functional biopolymer nanoparticles or microparticles can be formed by heat treatment of globular protein-ionic polysaccharide electrostatic complexes under appropriate solution conditions. These biopolymer particles can be used as encapsulation and delivery systems, fat mimetics, lightening agents, or texture modifiers. This review highlights recent progress in the design and fabrication of biopolymer particles based on heating globular protein-ionic polysaccharide complexes above the thermal denaturation temperature of the proteins. The influence of biopolymer type, protein-polysaccharide ratio, pH, ionic strength, and thermal history on the characteristics of the biopolymer particles formed is reviewed. Our current understanding of the underlying physicochemical mechanisms of particle formation and properties is given. The information provided in this review should facilitate the rational design of biopolymer particles with specific physicochemical and functional attributes, as well as stimulate further research in identifying the physicochemical origin of particle formation. Copyright © 2010 Elsevier B.V. All rights reserved.

  11. Models of the solvent-accessible surface of biopolymers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Smith, R.E.

    1996-09-01

    Many biopolymers such as proteins, DNA, and RNA have been studied because they have important biomedical roles and may be good targets for therapeutic action in treating diseases. This report describes how plastic models of the solvent-accessible surface of biopolymers were made. Computer files containing sets of triangles were calculated, then used on a stereolithography machine to make the models. Small (2 in.) models were made to test whether the computer calculations were done correctly. Also, files of the type (.stl) required by any ISO 9001 rapid prototyping machine were written onto a CD-ROM for distribution to American companies.

  12. Universe creation from the third-quantized vacuum

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McGuigan, M.

    1989-04-15

    Third quantization leads to a Hilbert space containing a third-quantized vacuum in which no universes are present as well as multiuniverse states. We consider the possibility of universe creation for the special case where the universe emerges in a no-particle state. The probability of such a creation is computed from both the path-integral and operator formalisms.

  13. Universe creation from the third-quantized vacuum

    NASA Astrophysics Data System (ADS)

    McGuigan, Michael

    1989-04-01

    Third quantization leads to a Hilbert space containing a third-quantized vacuum in which no universes are present as well as multiuniverse states. We consider the possibility of universe creation for the special case where the universe emerges in a no-particle state. The probability of such a creation is computed from both the path-integral and operator formalisms.

  14. In planta production of ELPylated spidroin-based proteins results in non-cytotoxic biopolymers.

    PubMed

    Hauptmann, Valeska; Menzel, Matthias; Weichert, Nicola; Reimers, Kerstin; Spohn, Uwe; Conrad, Udo

    2015-02-19

    Spider silk is a tear-resistant and elastic biopolymer that has outstanding mechanical properties. Additionally, exiguous immunogenicity is anticipated for spider silks. Therefore, spider silk represents a potential ideal biomaterial for medical applications. All known spider silk proteins, so-called spidroins, reveal a composite nature of silk-specific units, allowing the recombinant production of individual and combined segments. In this report, a miniaturized spidroin gene, named VSO1 that contains repetitive motifs of MaSp1 has been synthesized and combined to form multimers of distinct lengths, which were heterologously expressed as elastin-like peptide (ELP) fusion proteins in tobacco. The elastic penetration moduli of layered proteins were analyzed for different spidroin-based biopolymers. Moreover, we present the first immunological analysis of synthetic spidroin-based biopolymers. Characterization of the binding behavior of the sera after immunization by competitive ELISA suggested that the humoral immune response is mainly directed against the fusion partner ELP. In addition, cytocompatibility studies with murine embryonic fibroblasts indicated that recombinant spidroin-based biopolymers, in solution or as coated proteins, are well tolerated. The results show that spidroin-based biopolymers can induce humoral immune responses that are dependent on the fusion partner and the overall protein structure. Furthermore, cytocompatibility assays gave no indication of spidroin-derived cytotoxicity, suggesting that recombinant produced biopolymers composed of spider silk-like repetitive elements are suitable for biomedical applications.

  15. Photoacoustic monitoring of water transport process in calcareous stone coated with biopolymers

    NASA Astrophysics Data System (ADS)

    May-Crespo, J.; Ortega-Morales, B. O.; Camacho-Chab, J. C.; Quintana, P.; Alvarado-Gil, J. J.; Gonzalez-García, G.; Reyes-Estebanez, M.; Chan-Bacab, M. J.

    2016-12-01

    Moisture is a critical control of chemical and physical processes leading to stone deterioration. These processes can be enhanced by microbial biofilms and associated exopolymers (EPS). There is limited current understanding of the water transport process across rocks covered by EPS. In the present work, we employed the photoacoustic technique to study the influence of three biopolymers (xanthan, microbactan and arabic gum) in the water transport process of two types of limestone rock of similar mineralogy but contrasting porosity. Both controls of RL (low porosity) and RP (high porosity) presented the higher values of water diffusion coefficient ( D) than biopolymer-coated samples, indicating that biopolymer layers slowed down the transport of water. This trend was steeper for RP samples as water was transported seven times faster than in the more porous rock. Important differences of D values were observed among samples coated by different biopolymers. Scanning electron microscopy and optical microscopy showed that surface topography was different between both types of rocks; adherence of coatings was seen predominantly in the less porous rocks samples. FTIR and NMR analysis showed the presence of pyruvate and acetate in microbactan and xanthan gum, suggesting their participation on adherence to the calcareous surfaces, sealing surface pores. These results indicate that water transport at rock interfaces is dependent on the chemistry of biopolymer and surface porosity. The implications for reduced water transport in stone conservation under the influence of biopolymers include both enhanced and lower deterioration rates along with altered efficiency of biocide treatment of epilithic biofilms.

  16. Modeling and analysis of energy quantization effects on single electron inverter performance

    NASA Astrophysics Data System (ADS)

    Dan, Surya Shankar; Mahapatra, Santanu

    2009-08-01

    In this paper, for the first time, the effects of energy quantization on single electron transistor (SET) inverter performance are analyzed through analytical modeling and Monte Carlo simulations. It is shown that energy quantization mainly changes the Coulomb blockade region and drain current of SET devices and thus affects the noise margin, power dissipation, and the propagation delay of SET inverter. A new analytical model for the noise margin of SET inverter is proposed which includes the energy quantization effects. Using the noise margin as a metric, the robustness of SET inverter is studied against the effects of energy quantization. A compact expression is developed for a novel parameter quantization threshold which is introduced for the first time in this paper. Quantization threshold explicitly defines the maximum energy quantization that an SET inverter logic circuit can withstand before its noise margin falls below a specified tolerance level. It is found that SET inverter designed with CT:CG=1/3 (where CT and CG are tunnel junction and gate capacitances, respectively) offers maximum robustness against energy quantization.

  17. Biomedical Biopolymers, their Origin and Evolution in Biomedical Sciences: A Systematic Review

    PubMed Central

    Yadav, Harsh; Shah, Veena Gowri; Shah, Gaurav; Dhaka, Gaurav

    2015-01-01

    Biopolymers provide a plethora of applications in the pharmaceutical and medical applications. A material that can be used for biomedical applications like wound healing, drug delivery and tissue engineering should possess certain properties like biocompatibility, biodegradation to non-toxic products, low antigenicity, high bio-activity, processability to complicated shapes with appropriate porosity, ability to support cell growth and proliferation and appropriate mechanical properties, as well as maintaining mechanical strength. This paper reviews biodegradable biopolymers focusing on their potential in biomedical applications. Biopolymers most commonly used and most abundantly available have been described with focus on the properties relevant to biomedical importance. PMID:26501034

  18. Valorisation of CO2-rich off-gases to biopolymers through biotechnological process.

    PubMed

    Garcia-Gonzalez, Linsey; De Wever, Heleen

    2017-11-01

    As one of the key enabling technologies, industrial biotechnology has a high potential to tackle harmful CO2 emissions and to turn CO2 into a valuable commodity. So far, experimental work mainly focused on the bioconversion of pure CO2 to chemicals and plastics and little is known about the tolerance of the bioprocesses to the presence of impurities. This work is the first to investigate the impact of real CO2-rich off-gases on autotrophic production of polyhydroxybutyrate. To this end, two-phase heterotrophic-autotrophic fermentation experiments were set up, consisting of heterothrophic cell mass growth using glucose as substrate followed by autotrophic biopolymer production using either pure synthetic CO2 or industrial off-gases sampled at two point sources. The use of real off-gases did not affect the bacterial performance. High biopolymer content (up to 73%) and productivities (up to 0.227 g/lh) were obtained. Characterisation of the polymers showed that all biopolymers had similar properties, independent of the CO2 source. Moreover, the CO2-derived biopolymers' properties were comparable to commercial ones and biopolymers reported in literature, which are all produced from organic carbon sources. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

  19. Direct comparison of fractional and integer quantized Hall resistance

    NASA Astrophysics Data System (ADS)

    Ahlers, Franz J.; Götz, Martin; Pierz, Klaus

    2017-08-01

    We present precision measurements of the fractional quantized Hall effect, where the quantized resistance {{R}≤ft[ 1/3 \\right]} in the fractional quantum Hall state at filling factor 1/3 was compared with a quantized resistance {{R}[2]} , represented by an integer quantum Hall state at filling factor 2. A cryogenic current comparator bridge capable of currents down to the nanoampere range was used to directly compare two resistance values of two GaAs-based devices located in two cryostats. A value of 1-(5.3  ±  6.3) 10-8 (95% confidence level) was obtained for the ratio ({{R}≤ft[ 1/3 \\right]}/6{{R}[2]} ). This constitutes the most precise comparison of integer resistance quantization (in terms of h/e 2) in single-particle systems and of fractional quantization in fractionally charged quasi-particle systems. While not relevant for practical metrology, such a test of the validity of the underlying physics is of significance in the context of the upcoming revision of the SI.

  20. Do single-use medical devices containing biopolymers reduce the environmental impacts of surgical procedures compared with their plastic equivalents?

    PubMed

    Unger, Scott R; Hottle, Troy A; Hobbs, Shakira R; Thiel, Cassandra L; Campion, Nicole; Bilec, Melissa M; Landis, Amy E

    2017-01-01

    Background While petroleum-based plastics are extensively used in health care, recent developments in biopolymer manufacturing have created new opportunities for increased integration of biopolymers into medical products, devices and services. This study compared the environmental impacts of single-use disposable devices with increased biopolymer content versus typically manufactured devices in hysterectomy. Methods A comparative life cycle assessment of single-use disposable medical products containing plastic(s) versus the same single-use medical devices with biopolymers substituted for plastic(s) at Magee-Women's Hospital (Magee) in Pittsburgh, PA and the products used in four types of hysterectomies that contained plastics potentially suitable for biopolymer substitution. Magee is a 360-bed teaching hospital, which performs approximately 1400 hysterectomies annually. Results There are life cycle environmental impact tradeoffs when substituting biopolymers for petroplastics in procedures such as hysterectomies. The substitution of biopolymers for petroleum-based plastics increased smog-related impacts by approximately 900% for laparoscopic and robotic hysterectomies, and increased ozone depletion-related impacts by approximately 125% for laparoscopic and robotic hysterectomies. Conversely, biopolymers reduced life cycle human health impacts, acidification and cumulative energy demand for the four hysterectomy procedures. The integration of biopolymers into medical products is correlated with reductions in carcinogenic impacts, non-carcinogenic impacts and respiratory effects. However, the significant agricultural inputs associated with manufacturing biopolymers exacerbate environmental impacts of products and devices made using biopolymers. Conclusions The integration of biopolymers into medical products is correlated with reductions in carcinogenic impacts, non-carcinogenic impacts and respiratory effects; however, the significant agricultural inputs associated

  1. Film forming microbial biopolymers for commercial applications--a review.

    PubMed

    Vijayendra, S V N; Shamala, T R

    2014-12-01

    Microorganisms synthesize intracellular, structural and extracellular polymers also referred to as biopolymers for their function and survival. These biopolymers play specific roles as energy reserve materials, protective agents, aid in cell functioning, the establishment of symbiosis, osmotic adaptation and support the microbial genera to function, adapt, multiply and survive efficiently under changing environmental conditions. Viscosifying, gelling and film forming properties of these have been exploited for specific significant applications in food and allied industries. Intensive research activities and recent achievements in relevant and important research fields of global interest regarding film forming microbial biopolymers is the subject of this review. Microbial polymers such as pullulan, kefiran, bacterial cellulose (BC), gellan and levan are placed under the category of exopolysaccharides (EPS) and have several other functional properties including film formation, which can be used for various applications in food and allied industries. In addition to EPS, innumerable bacterial genera are found to synthesis carbon energy reserves in their cells known as polyhydroxyalkanoates (PHAs), microbial polyesters, which can be extruded into films with excellent moisture and oxygen barrier properties. Blow moldable biopolymers like PHA along with polylactic acid (PLA) synthesized chemically in vitro using lactic acid (LA), which is produced by LA bacteria through fermentation, are projected as biodegradable polymers of the future for packaging applications. Designing and creating of new property based on requirements through controlled synthesis can lead to improvement in properties of existing polysaccharides and create novel biopolymers of great commercial interest and value for wider applications. Incorporation of antimicrobials such as bacteriocins or silver and copper nanoparticles can enhance the functionality of polymer films especially in food packaging

  2. Fast large-scale object retrieval with binary quantization

    NASA Astrophysics Data System (ADS)

    Zhou, Shifu; Zeng, Dan; Shen, Wei; Zhang, Zhijiang; Tian, Qi

    2015-11-01

    The objective of large-scale object retrieval systems is to search for images that contain the target object in an image database. Where state-of-the-art approaches rely on global image representations to conduct searches, we consider many boxes per image as candidates to search locally in a picture. In this paper, a feature quantization algorithm called binary quantization is proposed. In binary quantization, a scale-invariant feature transform (SIFT) feature is quantized into a descriptive and discriminative bit-vector, which allows itself to adapt to the classic inverted file structure for box indexing. The inverted file, which stores the bit-vector and box ID where the SIFT feature is located inside, is compact and can be loaded into the main memory for efficient box indexing. We evaluate our approach on available object retrieval datasets. Experimental results demonstrate that the proposed approach is fast and achieves excellent search quality. Therefore, the proposed approach is an improvement over state-of-the-art approaches for object retrieval.

  3. Prediction-guided quantization for video tone mapping

    NASA Astrophysics Data System (ADS)

    Le Dauphin, Agnès.; Boitard, Ronan; Thoreau, Dominique; Olivier, Yannick; Francois, Edouard; LeLéannec, Fabrice

    2014-09-01

    Tone Mapping Operators (TMOs) compress High Dynamic Range (HDR) content to address Low Dynamic Range (LDR) displays. However, before reaching the end-user, this tone mapped content is usually compressed for broadcasting or storage purposes. Any TMO includes a quantization step to convert floating point values to integer ones. In this work, we propose to adapt this quantization, in the loop of an encoder, to reduce the entropy of the tone mapped video content. Our technique provides an appropriate quantization for each mode of both the Intra and Inter-prediction that is performed in the loop of a block-based encoder. The mode that minimizes a rate-distortion criterion uses its associated quantization to provide integer values for the rest of the encoding process. The method has been implemented in HEVC and was tested over two different scenarios: the compression of tone mapped LDR video content (using the HM10.0) and the compression of perceptually encoded HDR content (HM14.0). Results show an average bit-rate reduction under the same PSNR for all the sequences and TMO considered of 20.3% and 27.3% for tone mapped content and 2.4% and 2.7% for HDR content.

  4. Quantization of Simple Parametrized Systems

    NASA Astrophysics Data System (ADS)

    Ruffini, Giulio

    1995-01-01

    I study the canonical formulation and quantization of some simple parametrized systems using Dirac's formalism and the Becchi-Rouet-Stora-Tyutin (BRST) extended phase space method. These systems include the parametrized particle and minisuperspace. Using Dirac's formalism I first analyze for each case the construction of the classical reduced phase space. There are two separate features of these systems that may make this construction difficult: (a) Because of the boundary conditions used, the actions are not gauge invariant at the boundaries. (b) The constraints may have a disconnected solution space. The relativistic particle and minisuperspace have such complicated constraints, while the non-relativistic particle displays only the first feature. I first show that a change of gauge fixing is equivalent to a canonical transformation in the reduced phase space, thus resolving the problems associated with the first feature above. Then I consider the quantization of these systems using several approaches: Dirac's method, Dirac-Fock quantization, and the BRST formalism. In the cases of the relativistic particle and minisuperspace I consider first the quantization of one branch of the constraint at the time and then discuss the backgrounds in which it is possible to quantize simultaneously both branches. I motivate and define the inner product, and obtain, for example, the Klein-Gordon inner product for the relativistic case. Then I show how to construct phase space path integral representations for amplitudes in these approaches--the Batalin-Fradkin-Vilkovisky (BFV) and the Faddeev path integrals --from which one can then derive the path integrals in coordinate space--the Faddeev-Popov path integral and the geometric path integral. In particular I establish the connection between the Hilbert space representation and the range of the lapse in the path integrals. I also examine the class of paths that contribute in the path integrals and how they affect space

  5. Berezin-Toeplitz quantization and naturally defined star products for Kähler manifolds

    NASA Astrophysics Data System (ADS)

    Schlichenmaier, Martin

    2018-04-01

    For compact quantizable Kähler manifolds the Berezin-Toeplitz quantization schemes, both operator and deformation quantization (star product) are reviewed. The treatment includes Berezin's covariant symbols and the Berezin transform. The general compact quantizable case was done by Bordemann-Meinrenken-Schlichenmaier, Schlichenmaier, and Karabegov-Schlichenmaier. For star products on Kähler manifolds, separation of variables, or equivalently star product of (anti-) Wick type, is a crucial property. As canonically defined star products the Berezin-Toeplitz, Berezin, and the geometric quantization are treated. It turns out that all three are equivalent, but different.

  6. Image-adapted visually weighted quantization matrices for digital image compression

    NASA Technical Reports Server (NTRS)

    Watson, Andrew B. (Inventor)

    1994-01-01

    A method for performing image compression that eliminates redundant and invisible image components is presented. The image compression uses a Discrete Cosine Transform (DCT) and each DCT coefficient yielded by the transform is quantized by an entry in a quantization matrix which determines the perceived image quality and the bit rate of the image being compressed. The present invention adapts or customizes the quantization matrix to the image being compressed. The quantization matrix comprises visual masking by luminance and contrast techniques and by an error pooling technique all resulting in a minimum perceptual error for any given bit rate, or minimum bit rate for a given perceptual error.

  7. Terahertz Absorption and Circular Dichroism Spectroscopy of Solvated Biopolymers

    NASA Astrophysics Data System (ADS)

    Xu, Jing; Plaxco, Kevin; Allen, S. James

    2006-03-01

    Biopolymers are expected to exhibit broad spectral features in the terahertz frequency range, corresponding to their functionally relevant, global and sub-global collective vibrational modes with ˜ picosecond timescale. Recent advances in terahertz technology have stimulated researchers to employ terahertz absorption spectroscopy to directly probe these postulated collective modes. However, these pioneering studies have been limited to dry and, at best, moist samples. Successful isolation of low frequency vibrational activities of solvated biopolymers in their natural water environment has remained elusive, due to the overwhelming attenuation of the terahertz radiation by water. Here we have developed a terahertz absorption and circular dichroism spectrometer suitable for studying biopolymers in biologically relevant water solutions. We have precisely isolated, for the first time, the terahertz absorption of solvated prototypical proteins, Bovine Serum Albumin and Lysozyme, and made important direct comparison to the existing molecular dynamic simulations and normal mode calculations. We have also successfully demonstrated the magnetic circular dichroism in semiconductors, and placed upper bounds on the terahertz circular dichroism signatures of prototypical proteins in water solution.

  8. Hierarchically clustered adaptive quantization CMAC and its learning convergence.

    PubMed

    Teddy, S D; Lai, E M K; Quek, C

    2007-11-01

    The cerebellar model articulation controller (CMAC) neural network (NN) is a well-established computational model of the human cerebellum. Nevertheless, there are two major drawbacks associated with the uniform quantization scheme of the CMAC network. They are the following: (1) a constant output resolution associated with the entire input space and (2) the generalization-accuracy dilemma. Moreover, the size of the CMAC network is an exponential function of the number of inputs. Depending on the characteristics of the training data, only a small percentage of the entire set of CMAC memory cells is utilized. Therefore, the efficient utilization of the CMAC memory is a crucial issue. One approach is to quantize the input space nonuniformly. For existing nonuniformly quantized CMAC systems, there is a tradeoff between memory efficiency and computational complexity. Inspired by the underlying organizational mechanism of the human brain, this paper presents a novel CMAC architecture named hierarchically clustered adaptive quantization CMAC (HCAQ-CMAC). HCAQ-CMAC employs hierarchical clustering for the nonuniform quantization of the input space to identify significant input segments and subsequently allocating more memory cells to these regions. The stability of the HCAQ-CMAC network is theoretically guaranteed by the proof of its learning convergence. The performance of the proposed network is subsequently benchmarked against the original CMAC network, as well as two other existing CMAC variants on two real-life applications, namely, automated control of car maneuver and modeling of the human blood glucose dynamics. The experimental results have demonstrated that the HCAQ-CMAC network offers an efficient memory allocation scheme and improves the generalization and accuracy of the network output to achieve better or comparable performances with smaller memory usages. Index Terms-Cerebellar model articulation controller (CMAC), hierarchical clustering, hierarchically

  9. Quantization noise in digital speech. M.S. Thesis- Houston Univ.

    NASA Technical Reports Server (NTRS)

    Schmidt, O. L.

    1972-01-01

    The amount of quantization noise generated in a digital-to-analog converter is dependent on the number of bits or quantization levels used to digitize the analog signal in the analog-to-digital converter. The minimum number of quantization levels and the minimum sample rate were derived for a digital voice channel. A sample rate of 6000 samples per second and lowpass filters with a 3 db cutoff of 2400 Hz are required for 100 percent sentence intelligibility. Consonant sounds are the first speech components to be degraded by quantization noise. A compression amplifier can be used to increase the weighting of the consonant sound amplitudes in the analog-to-digital converter. An expansion network must be installed at the output of the digital-to-analog converter to restore the original weighting of the consonant sounds. This technique results in 100 percent sentence intelligibility for a sample rate of 5000 samples per second, eight quantization levels, and lowpass filters with a 3 db cutoff of 2000 Hz.

  10. Quantization and Superselection Sectors I:. Transformation Group C*-ALGEBRAS

    NASA Astrophysics Data System (ADS)

    Landsman, N. P.

    Quantization is defined as the act of assigning an appropriate C*-algebra { A} to a given configuration space Q, along with a prescription mapping self-adjoint elements of { A} into physically interpretable observables. This procedure is adopted to solve the problem of quantizing a particle moving on a homogeneous locally compact configuration space Q=G/H. Here { A} is chosen to be the transformation group C*-algebra corresponding to the canonical action of G on Q. The structure of these algebras and their representations are examined in some detail. Inequivalent quantizations are identified with inequivalent irreducible representations of the C*-algebra corresponding to the system, hence with its superselection sectors. Introducing the concept of a pre-Hamiltonian, we construct a large class of G-invariant time-evolutions on these algebras, and find the Hamiltonians implementing these time-evolutions in each irreducible representation of { A}. “Topological” terms in the Hamiltonian (or the corresponding action) turn out to be representation-dependent, and are automatically induced by the quantization procedure. Known “topological” charge quantization or periodicity conditions are then identically satisfied as a consequence of the representation theory of { A}.

  11. The adsorption interaction of a rutin-biopolymer complex with nanosized silica particles

    NASA Astrophysics Data System (ADS)

    Fedyanina, T. V.; Barvinchenko, V. N.; Lipkovskaya, N. A.; Pogorelyi, V. K.

    2008-10-01

    The influence of complex formation with biopolymers on the optical and acid properties of natural flavonoid rutin was studied. The adsorption interaction of biologically active flavonoids from officinal plants with the surface of nanosized silica particles was found to depend on the chemical nature of the biopolymer and adsorbate and solution properties.

  12. Encapsulation of lead from hazardous CRT glass wastes using biopolymer cross-linked concrete systems.

    PubMed

    Kim, Daeik; Quinlan, Michael; Yen, Teh Fu

    2009-01-01

    Discarded computer monitors and television sets are identified as hazardous materials due to the high content of lead in their cathode ray tubes (CRTs). Over 98% of lead is found in CRT glass. More than 75% of obsolete electronics including TV and CRT monitors are in storage because appropriate e-waste management and remediation technologies are insufficient. Already an e-waste tsunami is starting to roll across the US and the whole world. Thus, a new technology was developed as an alternative to current disposal methods; this method uses a concrete composite crosslinked with minute amounts of biopolymers and a crosslinking agent. Commercially available microbial biopolymers of xanthan gum and guar gum were used to encapsulate CRT wastes, reducing Pb leachability as measured by standard USEPA methods. In this investigation, the synergistic effect of the crosslinking reaction was observed through blending two different biopolymers or adding a crosslinking agent in biopolymer solution. This CRT-biopolymer-concrete (CBC) composite showed higher compressive strength than the standard concrete and a considerable decrease in lead leachability.

  13. Encapsulation of lead from hazardous CRT glass wastes using biopolymer cross-linked concrete systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kim, Daeik; Quinlan, Michael; Yen, Teh Fu

    2009-01-15

    Discarded computer monitors and television sets are identified as hazardous materials due to the high content of lead in their cathode ray tubes (CRTs). Over 98% of lead is found in CRT glass. More than 75% of obsolete electronics including TV and CRT monitors are in storage because appropriate e-waste management and remediation technologies are insufficient. Already an e-waste tsunami is starting to roll across the US and the whole world. Thus, a new technology was developed as an alternative to current disposal methods; this method uses a concrete composite crosslinked with minute amounts of biopolymers and a crosslinking agent.more » Commercially available microbial biopolymers of xanthan gum and guar gum were used to encapsulate CRT wastes, reducing Pb leachability as measured by standard USEPA methods. In this investigation, the synergistic effect of the crosslinking reaction was observed through blending two different biopolymers or adding a crosslinking agent in biopolymer solution. This CRT-biopolymer-concrete (CBC) composite showed higher compressive strength than the standard concrete and a considerable decrease in lead leachability.« less

  14. Quantized Rabi oscillations and circular dichroism in quantum Hall systems

    NASA Astrophysics Data System (ADS)

    Tran, D. T.; Cooper, N. R.; Goldman, N.

    2018-06-01

    The dissipative response of a quantum system upon periodic driving can be exploited as a probe of its topological properties. Here we explore the implications of such phenomena in two-dimensional gases subjected to a uniform magnetic field. It is shown that a filled Landau level exhibits a quantized circular dichroism, which can be traced back to its underlying nontrivial topology. Based on selection rules, we find that this quantized effect can be suitably described in terms of Rabi oscillations, whose frequencies satisfy simple quantization laws. We discuss how quantized dissipative responses can be probed locally, both in the bulk and at the boundaries of the system. This work suggests alternative forms of topological probes based on circular dichroism.

  15. Magnetic resonance image compression using scalar-vector quantization

    NASA Astrophysics Data System (ADS)

    Mohsenian, Nader; Shahri, Homayoun

    1995-12-01

    A new coding scheme based on the scalar-vector quantizer (SVQ) is developed for compression of medical images. SVQ is a fixed-rate encoder and its rate-distortion performance is close to that of optimal entropy-constrained scalar quantizers (ECSQs) for memoryless sources. The use of a fixed-rate quantizer is expected to eliminate some of the complexity issues of using variable-length scalar quantizers. When transmission of images over noisy channels is considered, our coding scheme does not suffer from error propagation which is typical of coding schemes which use variable-length codes. For a set of magnetic resonance (MR) images, coding results obtained from SVQ and ECSQ at low bit-rates are indistinguishable. Furthermore, our encoded images are perceptually indistinguishable from the original, when displayed on a monitor. This makes our SVQ based coder an attractive compression scheme for picture archiving and communication systems (PACS), currently under consideration for an all digital radiology environment in hospitals, where reliable transmission, storage, and high fidelity reconstruction of images are desired.

  16. Can one ADM quantize relativistic bosonicstrings and membranes?

    NASA Astrophysics Data System (ADS)

    Moncrief, Vincent

    2006-04-01

    The standard methods for quantizing relativistic strings diverge significantly from the Dirac-Wheeler-DeWitt program for quantization of generally covariant systems and one wonders whether the latter could be successfully implemented as an alternative to the former. As a first step in this direction, we consider the possibility of quantizing strings (and also relativistic membranes) via a partially gauge-fixed ADM (Arnowitt, Deser and Misner) formulation of the reduced field equations for these systems. By exploiting some (Euclidean signature) Hamilton-Jacobi techniques that Mike Ryan and I had developed previously for the quantization of Bianchi IX cosmological models, I show how to construct Diff( S 1)-invariant (or Diff(Σ)-invariant in the case of membranes) ground state wave functionals for the cases of co-dimension one strings and membranes embedded in Minkowski spacetime. I also show that the reduced Hamiltonian density operators for these systems weakly commute when applied to physical (i.e. Diff( S 1) or Diff(Σ)-invariant) states. While many open questions remain, these preliminary results seem to encourage further research along the same lines.

  17. Chemical modeling of acid-base properties of soluble biopolymers derived from municipal waste treatment materials.

    PubMed

    Tabasso, Silvia; Berto, Silvia; Rosato, Roberta; Marinos, Janeth Alicia Tafur; Ginepro, Marco; Zelano, Vincenzo; Daniele, Pier Giuseppe; Montoneri, Enzo

    2015-02-04

    This work reports a study of the proton-binding capacity of biopolymers obtained from different materials supplied by a municipal biowaste treatment plant located in Northern Italy. One material was the anaerobic fermentation digestate of the urban wastes organic humid fraction. The others were the compost of home and public gardening residues and the compost of the mix of the above residues, digestate and sewage sludge. These materials were hydrolyzed under alkaline conditions to yield the biopolymers by saponification. The biopolymers were characterized by 13C NMR spectroscopy, elemental analysis and potentiometric titration. The titration data were elaborated to attain chemical models for interpretation of the proton-binding capacity of the biopolymers obtaining the acidic sites concentrations and their protonation constants. The results obtained with the models and by NMR spectroscopy were elaborated together in order to better characterize the nature of the macromolecules. The chemical nature of the biopolymers was found dependent upon the nature of the sourcing materials.

  18. Chemical Modeling of Acid-Base Properties of Soluble Biopolymers Derived from Municipal Waste Treatment Materials

    PubMed Central

    Tabasso, Silvia; Berto, Silvia; Rosato, Roberta; Tafur Marinos, Janeth Alicia; Ginepro, Marco; Zelano, Vincenzo; Daniele, Pier Giuseppe; Montoneri, Enzo

    2015-01-01

    This work reports a study of the proton-binding capacity of biopolymers obtained from different materials supplied by a municipal biowaste treatment plant located in Northern Italy. One material was the anaerobic fermentation digestate of the urban wastes organic humid fraction. The others were the compost of home and public gardening residues and the compost of the mix of the above residues, digestate and sewage sludge. These materials were hydrolyzed under alkaline conditions to yield the biopolymers by saponification. The biopolymers were characterized by 13C NMR spectroscopy, elemental analysis and potentiometric titration. The titration data were elaborated to attain chemical models for interpretation of the proton-binding capacity of the biopolymers obtaining the acidic sites concentrations and their protonation constants. The results obtained with the models and by NMR spectroscopy were elaborated together in order to better characterize the nature of the macromolecules. The chemical nature of the biopolymers was found dependent upon the nature of the sourcing materials. PMID:25658795

  19. Physiology in conservation translocations

    PubMed Central

    Tarszisz, Esther; Dickman, Christopher R.; Munn, Adam J.

    2014-01-01

    Conservation translocations aim to restore species to their indigenous ranges, protect populations from threats and/or reinstate ecosystem functions. They are particularly important for the conservation and management of rare and threatened species. Despite tremendous efforts and advancement in recent years, animal conservation translocations generally have variable success, and the reasons for this are often uncertain. We suggest that when little is known about the physiology and wellbeing of individuals either before or after release, it will be difficult to determine their likelihood of survival, and this could limit advancements in the science of translocations for conservation. In this regard, we argue that physiology offers novel approaches that could substantially improve translocations and associated practices. As a discipline, it is apparent that physiology may be undervalued, perhaps because of the invasive nature of some physiological measurement techniques (e.g. sampling body fluids, surgical implantation). We examined 232 publications that dealt with translocations of terrestrial vertebrates and aquatic mammals and, defining ‘success’ as high or low, determined how many of these studies explicitly incorporated physiological aspects into their protocols and monitoring. From this review, it is apparent that physiological evaluation before and after animal releases could progress and improve translocation/reintroduction successes. We propose a suite of physiological measures, in addition to animal health indices, for assisting conservation translocations over the short term and also for longer term post-release monitoring. Perhaps most importantly, we argue that the incorporation of physiological assessments of animals at all stages of translocation can have important welfare implications by helping to reduce the total number of animals used. Physiological indicators can also help to refine conservation translocation methods. These approaches fall

  20. Physiology in conservation translocations.

    PubMed

    Tarszisz, Esther; Dickman, Christopher R; Munn, Adam J

    2014-01-01

    Conservation translocations aim to restore species to their indigenous ranges, protect populations from threats and/or reinstate ecosystem functions. They are particularly important for the conservation and management of rare and threatened species. Despite tremendous efforts and advancement in recent years, animal conservation translocations generally have variable success, and the reasons for this are often uncertain. We suggest that when little is known about the physiology and wellbeing of individuals either before or after release, it will be difficult to determine their likelihood of survival, and this could limit advancements in the science of translocations for conservation. In this regard, we argue that physiology offers novel approaches that could substantially improve translocations and associated practices. As a discipline, it is apparent that physiology may be undervalued, perhaps because of the invasive nature of some physiological measurement techniques (e.g. sampling body fluids, surgical implantation). We examined 232 publications that dealt with translocations of terrestrial vertebrates and aquatic mammals and, defining 'success' as high or low, determined how many of these studies explicitly incorporated physiological aspects into their protocols and monitoring. From this review, it is apparent that physiological evaluation before and after animal releases could progress and improve translocation/reintroduction successes. We propose a suite of physiological measures, in addition to animal health indices, for assisting conservation translocations over the short term and also for longer term post-release monitoring. Perhaps most importantly, we argue that the incorporation of physiological assessments of animals at all stages of translocation can have important welfare implications by helping to reduce the total number of animals used. Physiological indicators can also help to refine conservation translocation methods. These approaches fall under a

  1. Anaerobic digestion of starch-polyvinyl alcohol biopolymer packaging: biodegradability and environmental impact assessment.

    PubMed

    Guo, M; Trzcinski, A P; Stuckey, D C; Murphy, R J

    2011-12-01

    The digestibility of a starch-polyvinyl alcohol (PVOH) biopolymer insulated cardboard coolbox was investigated under a defined anaerobic digestion (AD) system with key parameters characterized. Laboratory results were combined with industrial operational data to develop a site-specific life cycle assessment (LCA) model. Inoculated with active bacterial trophic groups, the anaerobic biodegradability of three starch-PVOH biopolymers achieved 58-62%. The LCA modeling showed that the environmental burdens of the starch-PVOH biopolymer packaging under AD conditions on acidification, eutrophication, global warming and photochemical oxidation potential were dominated by atmospheric emissions released from substrate degradation and fuel combustion, whereas energy consumption and infrastructure requirements were the causes of abiotic depletion, ozone depletion and toxic impacts. Nevertheless, for this bio-packaging, AD of the starch-PVOH biopolymer combined with recycling of the cardboard emerged as the environmentally superior option and optimization of the energy utilization system could bring further environmental benefits to the AD process. Copyright © 2011 Elsevier Ltd. All rights reserved.

  2. Enzymatic functionalization of cork surface with antimicrobial hybrid biopolymer/silver nanoparticles.

    PubMed

    Francesko, Antonio; Blandón, Lucas; Vázquez, Mario; Petkova, Petya; Morató, Jordi; Pfeifer, Annett; Heinze, Thomas; Mendoza, Ernest; Tzanov, Tzanko

    2015-05-13

    Laccase-assisted assembling of hybrid biopolymer-silver nanoparticles and cork matrices into an antimicrobial material with potential for water remediation is herein described. Amino-functional biopolymers were first used as doping agents to stabilize concentrated colloidal dispersions of silver nanoparticles (AgNP), additionally providing the particles with functionalities for covalent immobilization onto cork to impart a durable antibacterial effect. The solvent-free AgNP synthesis by chemical reduction was carried out in the presence of chitosan (CS) or 6-deoxy-6-(ω-aminoethyl) aminocellulose (AC), leading to simultaneous AgNP biofunctionalization. This approach resulted in concentrated hybrid NP dispersion stable to aggregation and with hydrodynamic radius of particles of about 250 nm. Moreover, laccase enabled coupling between the phenolic groups in cork and amino moieties in the biopolymer-doped AgNP for permanent modification of the material. The antibacterial efficiency of the functionalized cork matrices, aimed as adsorbents for wastewater treatment, was evaluated against Escherichia coli and Staphylococcus aureus during 5 days in conditions mimicking those in constructed wetlands. Both intrinsically antimicrobial CS and AC contributed to the bactericidal effect of the enzymatically grafted on cork AgNP. In contrast, unmodified AgNP were easily washed off from the material, confirming that the biopolymers potentiated a durable antibacterial functionalization of the cork matrices.

  3. Differential calculus on quantized simple lie groups

    NASA Astrophysics Data System (ADS)

    Jurčo, Branislav

    1991-07-01

    Differential calculi, generalizations of Woronowicz's four-dimensional calculus on SU q (2), are introduced for quantized classical simple Lie groups in a constructive way. For this purpose, the approach of Faddeev and his collaborators to quantum groups was used. An equivalence of Woronowicz's enveloping algebra generated by the dual space to the left-invariant differential forms and the corresponding quantized universal enveloping algebra, is obtained for our differential calculi. Real forms for q ∈ ℝ are also discussed.

  4. Molecular Biodynamers: Dynamic Covalent Analogues of Biopolymers

    PubMed Central

    2017-01-01

    Conspectus Constitutional dynamic chemistry (CDC) features the use of reversible linkages at both molecular and supramolecular levels, including reversible covalent bonds (dynamic covalent chemistry, DCC) and noncovalent interactions (dynamic noncovalent chemistry, DNCC). Due to its inherent reversibility and stimuli-responsiveness, CDC has been widely utilized as a powerful tool for the screening of bioactive compounds, the exploitation of receptors or substrates driven by molecular recognition, and the fabrication of constitutionally dynamic materials. Implementation of CDC in biopolymer science leads to the generation of constitutionally dynamic analogues of biopolymers, biodynamers, at the molecular level (molecular biodynamers) through DCC or at the supramolecular level (supramolecular biodynamers) via DNCC. Therefore, biodynamers are prepared by reversible covalent polymerization or noncovalent polyassociation of biorelevant monomers. In particular, molecular biodynamers, biodynamers of the covalent type whose monomeric units are connected by reversible covalent bonds, are generated by reversible polymerization of bio-based monomers and can be seen as a combination of biopolymers with DCC. Owing to the reversible covalent bonds used in DCC, molecular biodynamers can undergo continuous and spontaneous constitutional modifications via incorporation/decorporation and exchange of biorelevant monomers in response to internal or external stimuli. As a result, they behave as adaptive materials with novel properties, such as self-healing, stimuli-responsiveness, and tunable mechanical and optical character. More specifically, molecular biodynamers combine the biorelevant characters (e.g., biocompatibility, biodegradability, biofunctionality) of bioactive monomers with the dynamic features of reversible covalent bonds (e.g., changeable, tunable, controllable, self-healing, and stimuli-responsive capacities), to realize synergistic properties in one system. In addition

  5. Economic assessment of flash co-pyrolysis of short rotation coppice and biopolymer waste streams.

    PubMed

    Kuppens, T; Cornelissen, T; Carleer, R; Yperman, J; Schreurs, S; Jans, M; Thewys, T

    2010-12-01

    The disposal problem associated with phytoextraction of farmland polluted with heavy metals by means of willow requires a biomass conversion technique which meets both ecological and economical needs. Combustion and gasification of willow require special and costly flue gas treatment to avoid re-emission of the metals in the atmosphere, whereas flash pyrolysis mainly results in the production of (almost) metal free bio-oil with a relatively high water content. Flash co-pyrolysis of biomass and waste of biopolymers synergistically improves the characteristics of the pyrolysis process: e.g. reduction of the water content of the bio-oil, more bio-oil and less char production and an increase of the HHV of the oil. This research paper investigates the economic consequences of the synergistic effects of flash co-pyrolysis of 1:1 w/w ratio blends of willow and different biopolymer waste streams via cost-benefit analysis and Monte Carlo simulations taking into account uncertainties. In all cases economic opportunities of flash co-pyrolysis of biomass with biopolymer waste are improved compared to flash pyrolysis of pure willow. Of all the biopolymers under investigation, polyhydroxybutyrate (PHB) is the most promising, followed by Eastar, Biopearls, potato starch, polylactic acid (PLA), corn starch and Solanyl in order of decreasing profits. Taking into account uncertainties, flash co-pyrolysis is expected to be cheaper than composting biopolymer waste streams, except for corn starch. If uncertainty increases, composting also becomes more interesting than flash co-pyrolysis for waste of Solanyl. If the investment expenditure is 15% higher in practice than estimated, the preference for flash co-pyrolysis compared to composting biopolymer waste becomes less clear. Only when the system of green current certificates is dismissed, composting clearly is a much cheaper processing technique for disposing of biopolymer waste. Copyright © 2010 Elsevier Ltd. All rights reserved.

  6. Mobility Enhancement of Red Blood Cells with Biopolymers

    NASA Astrophysics Data System (ADS)

    Tahara, Daiki; Oikawa, Noriko; Kurita, Rei

    2016-03-01

    Adhesion of red blood cells (RBC) to substrates are one of crucial problems for a blood clot. Here we investigate the mobility of RBC between two glass substrates in saline with polymer systems. We find that RBCs are adhered to the glass substrate with PEG, however the mobility steeply increases with fibrinogen and dextran, which are biopolymers. We also find that the mobility affects an aggregation dynamics of RBCs, which is related with diseases such as influenza, blood clot and so on. The Brownian motion helps to increase probability of contact with each other and to find a more stable condition of the aggregation. Thus the biopolymers play important roles not only for preventing the adhesion but also for the aggregation.

  7. 2-Step scalar deadzone quantization for bitplane image coding.

    PubMed

    Auli-Llinas, Francesc

    2013-12-01

    Modern lossy image coding systems generate a quality progressive codestream that, truncated at increasing rates, produces an image with decreasing distortion. Quality progressivity is commonly provided by an embedded quantizer that employs uniform scalar deadzone quantization (USDQ) together with a bitplane coding strategy. This paper introduces a 2-step scalar deadzone quantization (2SDQ) scheme that achieves same coding performance as that of USDQ while reducing the coding passes and the emitted symbols of the bitplane coding engine. This serves to reduce the computational costs of the codec and/or to code high dynamic range images. The main insights behind 2SDQ are the use of two quantization step sizes that approximate wavelet coefficients with more or less precision depending on their density, and a rate-distortion optimization technique that adjusts the distortion decreases produced when coding 2SDQ indexes. The integration of 2SDQ in current codecs is straightforward. The applicability and efficiency of 2SDQ are demonstrated within the framework of JPEG2000.

  8. Third Quantization and Quantum Universes

    NASA Astrophysics Data System (ADS)

    Kim, Sang Pyo

    2014-01-01

    We study the third quantization of the Friedmann-Robertson-Walker cosmology with N-minimal massless fields. The third quantized Hamiltonian for the Wheeler-DeWitt equation in the minisuperspace consists of infinite number of intrinsic time-dependent, decoupled oscillators. The Hamiltonian has a pair of invariant operators for each universe with conserved momenta of the fields that play a role of the annihilation and the creation operators and that construct various quantum states for the universe. The closed universe exhibits an interesting feature of transitions from stable states to tachyonic states depending on the conserved momenta of the fields. In the classical forbidden unstable regime, the quantum states have googolplex growing position and conjugate momentum dispersions, which defy any measurements of the position of the universe.

  9. Quantization selection in the high-throughput H.264/AVC encoder based on the RD

    NASA Astrophysics Data System (ADS)

    Pastuszak, Grzegorz

    2013-10-01

    In the hardware video encoder, the quantization is responsible for quality losses. On the other hand, it allows the reduction of bit rates to the target one. If the mode selection is based on the rate-distortion criterion, the quantization can also be adjusted to obtain better compression efficiency. Particularly, the use of Lagrangian function with a given multiplier enables the encoder to select the most suitable quantization step determined by the quantization parameter QP. Moreover, the quantization offset added before discarding the fraction value after quantization can be adjusted. In order to select the best quantization parameter and offset in real time, the HD/SD encoder should be implemented in the hardware. In particular, the hardware architecture should embed the transformation and quantization modules able to process the same residuals many times. In this work, such an architecture is used. Experimental results show what improvements in terms of compression efficiency are achievable for Intra coding.

  10. Group theoretical quantization of isotropic loop cosmology

    NASA Astrophysics Data System (ADS)

    Livine, Etera R.; Martín-Benito, Mercedes

    2012-06-01

    We achieve a group theoretical quantization of the flat Friedmann-Robertson-Walker model coupled to a massless scalar field adopting the improved dynamics of loop quantum cosmology. Deparemetrizing the system using the scalar field as internal time, we first identify a complete set of phase space observables whose Poisson algebra is isomorphic to the su(1,1) Lie algebra. It is generated by the volume observable and the Hamiltonian. These observables describe faithfully the regularized phase space underlying the loop quantization: they account for the polymerization of the variable conjugate to the volume and for the existence of a kinematical nonvanishing minimum volume. Since the Hamiltonian is an element in the su(1,1) Lie algebra, the dynamics is now implemented as SU(1, 1) transformations. At the quantum level, the system is quantized as a timelike irreducible representation of the group SU(1, 1). These representations are labeled by a half-integer spin, which gives the minimal volume. They provide superselection sectors without quantization anomalies and no factor ordering ambiguity arises when representing the Hamiltonian. We then explicitly construct SU(1, 1) coherent states to study the quantum evolution. They not only provide semiclassical states but truly dynamical coherent states. Their use further clarifies the nature of the bounce that resolves the big bang singularity.

  11. Generalized noise terms for the quantized fluctuational electrodynamics

    NASA Astrophysics Data System (ADS)

    Partanen, Mikko; Häyrynen, Teppo; Tulkki, Jukka; Oksanen, Jani

    2017-03-01

    The quantization of optical fields in vacuum has been known for decades, but extending the field quantization to lossy and dispersive media in nonequilibrium conditions has proven to be complicated due to the position-dependent electric and magnetic responses of the media. In fact, consistent position-dependent quantum models for the photon number in resonant structures have only been formulated very recently and only for dielectric media. Here we present a general position-dependent quantized fluctuational electrodynamics (QFED) formalism that extends the consistent field quantization to describe the photon number also in the presence of magnetic field-matter interactions. It is shown that the magnetic fluctuations provide an additional degree of freedom in media where the magnetic coupling to the field is prominent. Therefore, the field quantization requires an additional independent noise operator that is commuting with the conventional bosonic noise operator describing the polarization current fluctuations in dielectric media. In addition to allowing the detailed description of field fluctuations, our methods provide practical tools for modeling optical energy transfer and the formation of thermal balance in general dielectric and magnetic nanodevices. We use QFED to investigate the magnetic properties of microcavity systems to demonstrate an example geometry in which it is possible to probe fields arising from the electric and magnetic source terms. We show that, as a consequence of the magnetic Purcell effect, the tuning of the position of an emitter layer placed inside a vacuum cavity can make the emissivity of a magnetic emitter to exceed the emissivity of a corresponding electric emitter.

  12. Quantization of an electromagnetic field in two-dimensional photonic structures based on the scattering matrix formalism ( S-quantization)

    NASA Astrophysics Data System (ADS)

    Ivanov, K. A.; Nikolaev, V. V.; Gubaydullin, A. R.; Kaliteevski, M. A.

    2017-10-01

    Based on the scattering matrix formalism, we have developed a method of quantization of an electromagnetic field in two-dimensional photonic nanostructures ( S-quantization in the two-dimensional case). In this method, the fields at the boundaries of the quantization box are expanded into a Fourier series and are related with each other by the scattering matrix of the system, which is the product of matrices describing the propagation of plane waves in empty regions of the quantization box and the scattering matrix of the photonic structure (or an arbitrary inhomogeneity). The quantization condition (similarly to the onedimensional case) is formulated as follows: the eigenvalues of the scattering matrix are equal to unity, which corresponds to the fact that the set of waves that are incident on the structure (components of the expansion into the Fourier series) is equal to the set of waves that travel away from the structure (outgoing waves). The coefficients of the matrix of scattering through the inhomogeneous structure have been calculated using the following procedure: the structure is divided into parallel layers such that the permittivity in each layer varies only along the axis that is perpendicular to the layers. Using the Fourier transform, the Maxwell equations have been written in the form of a matrix that relates the Fourier components of the electric field at the boundaries of neighboring layers. The product of these matrices is the transfer matrix in the basis of the Fourier components of the electric field. Represented in a block form, it is composed by matrices that contain the reflection and transmission coefficients for the Fourier components of the field, which, in turn, constitute the scattering matrix. The developed method considerably simplifies the calculation scheme for the analysis of the behavior of the electromagnetic field in structures with a two-dimensional inhomogeneity. In addition, this method makes it possible to obviate

  13. Uniform quantized electron gas

    NASA Astrophysics Data System (ADS)

    Høye, Johan S.; Lomba, Enrique

    2016-10-01

    In this work we study the correlation energy of the quantized electron gas of uniform density at temperature T  =  0. To do so we utilize methods from classical statistical mechanics. The basis for this is the Feynman path integral for the partition function of quantized systems. With this representation the quantum mechanical problem can be interpreted as, and is equivalent to, a classical polymer problem in four dimensions where the fourth dimension is imaginary time. Thus methods, results, and properties obtained in the statistical mechanics of classical fluids can be utilized. From this viewpoint we recover the well known RPA (random phase approximation). Then to improve it we modify the RPA by requiring the corresponding correlation function to be such that electrons with equal spins can not be on the same position. Numerical evaluations are compared with well known results of a standard parameterization of Monte Carlo correlation energies.

  14. Structure and properties of hybrid biopolymer particles fabricated by co-precipitation cross-linking dissolution procedure.

    PubMed

    Xiong, Yu; Georgieva, Radostina; Steffen, Axel; Smuda, Kathrin; Bäumler, Hans

    2018-03-15

    The Co-precipitation Crosslinking Dissolution technique (CCD-technique) allows a few-steps fabrication of particles composed of different biopolymers and bioactive agents under mild conditions. Morphology and properties of the fabricated biopolymer particles depend on the fabrication conditions, the nature of the biopolymers and additives, but also on the choice of the inorganic templates for co-precipitation. Here, we investigate the influence of an acidic biopolymer, hyaluronic acid (HA), on the formation of particles from bovine hemoglobin and bovine serum albumin applying co-precipitation with CaCO 3 and MnCO 3 . CaCO 3 templated biopolymer particles are almost spherical with particle size from 2 to 20 µm and protein entrapment efficiency from 13 to 77%. Presence of HA causes significant structural changes of the particles and decreasing protein entrapment efficiency. In contrast, MnCO 3 templated particles exhibit uniform peanut shape and submicron size with remarkably high protein entrapment efficiency of nearly 100%. Addition of HA has no influence on the protein entrapment efficiency or on morphology and size of the particles. These effects can be attributed to the strong interaction of Mn 2+ with proteins and much weaker interaction with HA. Therefore, entrapment efficiency, size and structure of biopolymer particles can be optimized by varying the mineral templates and additives. Copyright © 2017 Elsevier Inc. All rights reserved.

  15. Density-Dependent Quantized Least Squares Support Vector Machine for Large Data Sets.

    PubMed

    Nan, Shengyu; Sun, Lei; Chen, Badong; Lin, Zhiping; Toh, Kar-Ann

    2017-01-01

    Based on the knowledge that input data distribution is important for learning, a data density-dependent quantization scheme (DQS) is proposed for sparse input data representation. The usefulness of the representation scheme is demonstrated by using it as a data preprocessing unit attached to the well-known least squares support vector machine (LS-SVM) for application on big data sets. Essentially, the proposed DQS adopts a single shrinkage threshold to obtain a simple quantization scheme, which adapts its outputs to input data density. With this quantization scheme, a large data set is quantized to a small subset where considerable sample size reduction is generally obtained. In particular, the sample size reduction can save significant computational cost when using the quantized subset for feature approximation via the Nyström method. Based on the quantized subset, the approximated features are incorporated into LS-SVM to develop a data density-dependent quantized LS-SVM (DQLS-SVM), where an analytic solution is obtained in the primal solution space. The developed DQLS-SVM is evaluated on synthetic and benchmark data with particular emphasis on large data sets. Extensive experimental results show that the learning machine incorporating DQS attains not only high computational efficiency but also good generalization performance.

  16. Superfield quantization

    NASA Astrophysics Data System (ADS)

    Batalin, I. A.; Bering, K.; Damgaard, P. H.

    1998-03-01

    We present a superfield formulation of the quantization program for theories with first-class constraints. An exact operator formulation is given, and we show how to set up a phase-space path integral entirely in terms of superfields. BRST transformations and canonical transformations enter on equal footing, and they allow us to establish a superspace analog of the BFV theorem. We also present a formal derivation of the Lagrangian superfield analogue of the field-antifield formalism by an integration over half of the phase-space variables.

  17. 4D Sommerfeld quantization of the complex extended charge

    NASA Astrophysics Data System (ADS)

    Bulyzhenkov, Igor E.

    2017-12-01

    Gravitational fields and accelerations cannot change quantized magnetic flux in closed line contours due to flat 3D section of curved 4D space-time-matter. The relativistic Bohr-Sommerfeld quantization of the imaginary charge reveals an electric analog of the Compton length, which can introduce quantitatively the fine structure constant and the Plank length.

  18. Nanostructured Materials Utilized in Biopolymer-based Plastics for Food Packaging Applications.

    PubMed

    Ghanbarzadeh, Babak; Oleyaei, Seyed Amir; Almasi, Hadi

    2015-01-01

    Most materials currently used for food packaging are nondegradable, generating environmental problems. Several biopolymers have been exploited to develop materials for ecofriendly food packaging. However, the use of biopolymers has been limited because of their usually poor mechanical and barrier properties, which may be improved by adding reinforcing compounds (fillers), forming composites. Most reinforced materials present poor matrix-filler interactions, which tend to improve with decreasing filler dimensions. The use of fillers with at least one nanoscale dimension (nanoparticles) produces nanocomposites. Nanoparticles have proportionally larger surface area than their microscale counterparts, which favors the filler-matrix interactions and the performance of the resulting material. Besides nanoreinforcements, nanoparticles can have other functions when added to a polymer, such as antimicrobial activity, etc. in this review paper, the structure and properties of main kinds of nanostructured materials which have been studied to use as nanofiller in biopolymer matrices are overviewed, as well as their effects and applications.

  19. Natural gum-type biopolymers as potential modified nonpolar drug release systems.

    PubMed

    Salamanca, Constain H; Yarce, Cristhian J; Moreno, Roger A; Prieto, Vanessa; Recalde, Juanita

    2018-06-01

    In this work, the relationship between surface properties and drug release mechanism from binary composition tablets formed by quetiapine fumarate and biopolymer materials was studied. The biopolymers correspond to xanthan and tragacanth gums, which are projected as modified drug release systems. The surface studies were carried out by the sessile drop method, while the surface free energy (SFE) was determinate through Young-Dupree and OWRK semi-empirical models. On the other hand, the drug release studies were performed by in vitro dissolution tests, where the data were analyzed through kinetic models of zero order, first order, Higuchi, and Korsmeyer-Peppas. The results showed that depending on the type and the proportion of biopolymer, surface properties, and the drug release processes are significantly affected, wherein tragacanth gum present a usual erosion mechanism, while xanthan gum describes a swelling mechanism that controls the release of the drug. Copyright © 2018 Elsevier Ltd. All rights reserved.

  20. Time-Symmetric Quantization in Spacetimes with Event Horizons

    NASA Astrophysics Data System (ADS)

    Kobakhidze, Archil; Rodd, Nicholas

    2013-08-01

    The standard quantization formalism in spacetimes with event horizons implies a non-unitary evolution of quantum states, as initial pure states may evolve into thermal states. This phenomenon is behind the famous black hole information loss paradox which provoked long-standing debates on the compatibility of quantum mechanics and gravity. In this paper we demonstrate that within an alternative time-symmetric quantization formalism thermal radiation is absent and states evolve unitarily in spacetimes with event horizons. We also discuss the theoretical consistency of the proposed formalism. We explicitly demonstrate that the theory preserves the microcausality condition and suggest a "reinterpretation postulate" to resolve other apparent pathologies associated with negative energy states. Accordingly as there is a consistent alternative, we argue that choosing to use time-asymmetric quantization is a necessary condition for the black hole information loss paradox.

  1. Multilayered materials based on biopolymers as drug delivery systems.

    PubMed

    Vilela, Carla; Figueiredo, Ana R P; Silvestre, Armando J D; Freire, Carmen S R

    2017-02-01

    The design of efficient therapeutic delivery devices has become a tremendously active area of research with a strong contribution from the layer-by-layer (LbL) technology. The application of this simple yet firmly established technique for the design of drug reservoirs originates a multitude of multilayered systems of tailored architecture and with a high level of control of drug administration. Areas covered: This review will focus on the most recent and original research on LbL assemblies based on biopolymers including polysaccharides, polypeptides and proteins, with potential use in drug delivery. Herein, drug reservoirs consisting of multilayered planar films and capsules will be examined with emphasis on the ones benefiting from the non-cytotoxic and biocompatible nature of biopolymers, which are suitable to load, protect and release a high payload of toxic and fragile drugs. Expert opinion: The combination of biopolymers with LbL technology has undergone extensive research, still, there is a multitude of R&D opportunities for the design of smart drug delivery systems with distinct multilayered morphologies, low immunological response, non-invasive drug release devices, as well as the design of theranostic systems combining diagnostics and therapeutic features. Further developments in terms of scaling towards mass production in the pharmaceutical industry are expected in the long-term.

  2. Generalized radiation-field quantization method and the Petermann excess-noise factor

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cheng, Y.-J.; Siegman, A.E.; E.L. Ginzton Laboratory, Stanford University, Stanford, California 94305

    2003-10-01

    We propose a generalized radiation-field quantization formalism, where quantization does not have to be referenced to a set of power-orthogonal eigenmodes as conventionally required. This formalism can be used to directly quantize the true system eigenmodes, which can be non-power-orthogonal due to the open nature of the system or the gain/loss medium involved in the system. We apply this generalized field quantization to the laser linewidth problem, in particular, lasers with non-power-orthogonal oscillation modes, and derive the excess-noise factor in a fully quantum-mechanical framework. We also show that, despite the excess-noise factor for oscillating modes, the total spatially averaged decaymore » rate for the laser atoms remains unchanged.« less

  3. A Biogeotechnical approach to Stabilize Soft Marine Soil with a Microbial Organic Material called Biopolymer

    NASA Astrophysics Data System (ADS)

    Chang, I.; Cho, G. C.; Kwon, Y. M.; Im, J.

    2017-12-01

    The importance and demands of offshore and coastal area development are increasing due to shortage of usable land and to have access to valuable marine resources. However, most coastal soils are soft sediments, mainly composed with fines (silt and clay) and having high water and organic contents, which induce complicated mechanical- and geochemical- behaviors and even be insufficient in Geotechnical engineering aspects. At least, soil stabilization procedures are required for those soft sediments, regardless of the purpose of usage on the site. One of the most common soft soil stabilization method is using ordinary cement as a soil strengthening binder. However, the use of cement in marine environments is reported to occur environmental concerns such as pH increase and accompanying marine ecosystem disturbance. Therefore, a new environmentally-friendly treatment material for coastal and offshore soils. In this study, a biopolymer material produced by microbes is introduced to enhance the physical behavior of a soft tidal flat sediment by considering the biopolymer rheology, soil mineralogy, and chemical properties of marine water. Biopolymer material used in this study forms inter-particle bonds between particles which is promoted through cation-bridges where the cations are provided from marine water. Moreover, biopolymer treatment renders unique stress-strain relationship of soft soils. The mechanical stiffness (M) instantly increase with the presence of biopolymer, while time-dependent settlement behavior (consolidation) shows a big delay due to the viscous biopolymer hydrogels in pore spaces.

  4. Remediation of heavy hydrocarbon impacted soil using biopolymer and polystyrene foam beads.

    PubMed

    Wilton, Nicholas; Lyon-Marion, Bonnie A; Kamath, Roopa; McVey, Kevin; Pennell, Kurt D; Robbat, Albert

    2018-05-05

    A green chemistry solution is presented for the remediation of heavy hydrocarbon impacted soils. The two-phase recovery system relies on a plant-based biopolymer, which releases hydrocarbons from soil, and polystyrene foam beads, which recover them from solids and water. The efficiency of the process was demonstrated by comparisons with control experiments, where water, biopolymer, or beads alone yielded total petroleum hydrocarbon (TPH) reductions of 25%, 52%, and 58%, respectively, compared to 94% when 1.25 mL of 1% biopolymer and 15 mg beads per gram of soil were agitated for 30 min. Reductions in TPH content were substantial regardless of soil fraction, with removals of 97%, 91%, and 75% from sand, silt, and clay size fractions, respectively. Additionally, treatment efficiency was independent of carbon number, C 13 to C 43 , as demonstrated by reductions in both diesel fuel (C 13 -C 28 ) and residual-range organics (C 25 -C 43 ) of ∼90%. Compared to other published polymer- and surfactant-based treatment methods, this system requires less mobilizing agent, sorbent, and mixing time. The remediation process is both efficient and sustainable because the biopolymer is re-useable and sourced from renewable crops and polystyrene beads are obtained from recycled materials. Copyright © 2018 Elsevier B.V. All rights reserved.

  5. Quantized Algebra I Texts

    ERIC Educational Resources Information Center

    DeBuvitz, William

    2014-01-01

    I am a volunteer reader at the Princeton unit of "Learning Ally" (formerly "Recording for the Blind & Dyslexic") and I recently discovered that high school students are introduced to the concept of quantization well before they take chemistry and physics. For the past few months I have been reading onto computer files a…

  6. The uniform quantized electron gas revisited

    NASA Astrophysics Data System (ADS)

    Lomba, Enrique; Høye, Johan S.

    2017-11-01

    In this article we continue and extend our recent work on the correlation energy of the quantized electron gas of uniform density at temperature T=0 . As before, we utilize the methods, properties, and results obtained by means of classical statistical mechanics. These were extended to quantized systems via the Feynman path integral formalism. The latter translates the quantum problem into a classical polymer problem in four dimensions. Again, the well known RPA (random phase approximation) is recovered as a basic result which we then modify and improve upon. Here we analyze the condition of thermodynamic self-consistency. Our numerical calculations exhibit a remarkable agreement with well known results of a standard parameterization of Monte Carlo correlation energies.

  7. Introduction to quantized LIE groups and algebras

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Tjin, T.

    1992-10-10

    In this paper, the authors give a self-contained introduction to the theory of quantum groups according to Drinfeld, highlighting the formal aspects as well as the applications to the Yang-Baxter equation and representation theory. Introductions to Hopf algebras, Poisson structures and deformation quantization are also provided. After defining Poisson Lie groups the authors study their relation to Lie bialgebras and the classical Yang-Baxter equation. Then the authors explain in detail the concept of quantization for them. As an example the quantization of sl[sub 2] is explicitly carried out. Next, the authors show how quantum groups are related to the Yang-Baxtermore » equation and how they can be used to solve it. Using the quantum double construction, the authors explicitly construct the universal R matrix for the quantum sl[sub 2] algebra. In the last section, the authors deduce all finite-dimensional irreducible representations for q a root of unity. The authors also give their tensor product decomposition (fusion rules), which is relevant to conformal field theory.« less

  8. Conductance Quantization in Resistive Random Access Memory

    NASA Astrophysics Data System (ADS)

    Li, Yang; Long, Shibing; Liu, Yang; Hu, Chen; Teng, Jiao; Liu, Qi; Lv, Hangbing; Suñé, Jordi; Liu, Ming

    2015-10-01

    The intrinsic scaling-down ability, simple metal-insulator-metal (MIM) sandwich structure, excellent performances, and complementary metal-oxide-semiconductor (CMOS) technology-compatible fabrication processes make resistive random access memory (RRAM) one of the most promising candidates for the next-generation memory. The RRAM device also exhibits rich electrical, thermal, magnetic, and optical effects, in close correlation with the abundant resistive switching (RS) materials, metal-oxide interface, and multiple RS mechanisms including the formation/rupture of nanoscale to atomic-sized conductive filament (CF) incorporated in RS layer. Conductance quantization effect has been observed in the atomic-sized CF in RRAM, which provides a good opportunity to deeply investigate the RS mechanism in mesoscopic dimension. In this review paper, the operating principles of RRAM are introduced first, followed by the summarization of the basic conductance quantization phenomenon in RRAM and the related RS mechanisms, device structures, and material system. Then, we discuss the theory and modeling of quantum transport in RRAM. Finally, we present the opportunities and challenges in quantized RRAM devices and our views on the future prospects.

  9. Conductance Quantization in Resistive Random Access Memory.

    PubMed

    Li, Yang; Long, Shibing; Liu, Yang; Hu, Chen; Teng, Jiao; Liu, Qi; Lv, Hangbing; Suñé, Jordi; Liu, Ming

    2015-12-01

    The intrinsic scaling-down ability, simple metal-insulator-metal (MIM) sandwich structure, excellent performances, and complementary metal-oxide-semiconductor (CMOS) technology-compatible fabrication processes make resistive random access memory (RRAM) one of the most promising candidates for the next-generation memory. The RRAM device also exhibits rich electrical, thermal, magnetic, and optical effects, in close correlation with the abundant resistive switching (RS) materials, metal-oxide interface, and multiple RS mechanisms including the formation/rupture of nanoscale to atomic-sized conductive filament (CF) incorporated in RS layer. Conductance quantization effect has been observed in the atomic-sized CF in RRAM, which provides a good opportunity to deeply investigate the RS mechanism in mesoscopic dimension. In this review paper, the operating principles of RRAM are introduced first, followed by the summarization of the basic conductance quantization phenomenon in RRAM and the related RS mechanisms, device structures, and material system. Then, we discuss the theory and modeling of quantum transport in RRAM. Finally, we present the opportunities and challenges in quantized RRAM devices and our views on the future prospects.

  10. Quantization Of Temperature

    NASA Astrophysics Data System (ADS)

    O'Brien, Paul

    2017-01-01

    Max Plank did not quantize temperature. I will show that the Plank temperature violates the Plank scale. Plank stated that the Plank scale was Natures scale and independent of human construct. Also stating that even aliens would derive the same values. He made a huge mistake, because temperature is based on the Kelvin scale, which is man-made just like the meter and kilogram. He did not discover natures scale for the quantization of temperature. His formula is flawed, and his value is incorrect. Plank's calculation is Tp = c2Mp/Kb. The general form of this equation is T = E/Kb Why is this wrong? The temperature for a fixed amount of energy is dependent upon the volume it occupies. Using the correct formula involves specifying the radius of the volume in the form of (RE). This leads to an inequality and a limit that is equivalent to the Bekenstein Bound, but using temperature instead of entropy. Rewriting this equation as a limit defines both the maximum temperature and Boltzmann's constant. This will saturate any space-time boundary with maximum temperature and information density, also the minimum radius and entropy. The general form of the equation then becomes a limit in BH thermodynamics T <= (RE)/(λKb) .

  11. Performance of customized DCT quantization tables on scientific data

    NASA Technical Reports Server (NTRS)

    Ratnakar, Viresh; Livny, Miron

    1994-01-01

    We show that it is desirable to use data-specific or customized quantization tables for scaling the spatial frequency coefficients obtained using the Discrete Cosine Transform (DCT). DCT is widely used for image and video compression (MP89, PM93) but applications typically use default quantization matrices. Using actual scientific data gathered from divers sources such as spacecrafts and electron-microscopes, we show that the default compression/quality tradeoffs can be significantly improved upon by using customized tables. We also show that significant improvements are possible for the standard test images Lena and Baboon. This work is part of an effort to develop a practical scheme for optimizing quantization matrices for any given image or video stream, under any given quality or compression constraints.

  12. A hybrid LBG/lattice vector quantizer for high quality image coding

    NASA Technical Reports Server (NTRS)

    Ramamoorthy, V.; Sayood, K.; Arikan, E. (Editor)

    1991-01-01

    It is well known that a vector quantizer is an efficient coder offering a good trade-off between quantization distortion and bit rate. The performance of a vector quantizer asymptotically approaches the optimum bound with increasing dimensionality. A vector quantized image suffers from the following types of degradations: (1) edge regions in the coded image contain staircase effects, (2) quasi-constant or slowly varying regions suffer from contouring effects, and (3) textured regions lose details and suffer from granular noise. All three of these degradations are due to the finite size of the code book, the distortion measures used in the design, and due to the finite training procedure involved in the construction of the code book. In this paper, we present an adaptive technique which attempts to ameliorate the edge distortion and contouring effects.

  13. Simultaneous Conduction and Valence Band Quantization in Ultrashallow High-Density Doping Profiles in Semiconductors

    NASA Astrophysics Data System (ADS)

    Mazzola, F.; Wells, J. W.; Pakpour-Tabrizi, A. C.; Jackman, R. B.; Thiagarajan, B.; Hofmann, Ph.; Miwa, J. A.

    2018-01-01

    We demonstrate simultaneous quantization of conduction band (CB) and valence band (VB) states in silicon using ultrashallow, high-density, phosphorus doping profiles (so-called Si:P δ layers). We show that, in addition to the well-known quantization of CB states within the dopant plane, the confinement of VB-derived states between the subsurface P dopant layer and the Si surface gives rise to a simultaneous quantization of VB states in this narrow region. We also show that the VB quantization can be explained using a simple particle-in-a-box model, and that the number and energy separation of the quantized VB states depend on the depth of the P dopant layer beneath the Si surface. Since the quantized CB states do not show a strong dependence on the dopant depth (but rather on the dopant density), it is straightforward to exhibit control over the properties of the quantized CB and VB states independently of each other by choosing the dopant density and depth accordingly, thus offering new possibilities for engineering quantum matter.

  14. Constraints on operator ordering from third quantization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ohkuwa, Yoshiaki; Faizal, Mir, E-mail: f2mir@uwaterloo.ca; Ezawa, Yasuo

    2016-02-15

    In this paper, we analyse the Wheeler–DeWitt equation in the third quantized formalism. We will demonstrate that for certain operator ordering, the early stages of the universe are dominated by quantum fluctuations, and the universe becomes classical at later stages during the cosmic expansion. This is physically expected, if the universe is formed from quantum fluctuations in the third quantized formalism. So, we will argue that this physical requirement can be used to constrain the form of the operator ordering chosen. We will explicitly demonstrate this to be the case for two different cosmological models.

  15. Hybrid waste filler filled bio-polymer foam composites for sound absorbent materials

    NASA Astrophysics Data System (ADS)

    Rus, Anika Zafiah M.; Azahari, M. Shafiq M.; Kormin, Shaharuddin; Soon, Leong Bong; Zaliran, M. Taufiq; Ahraz Sadrina M. F., L.

    2017-09-01

    Sound absorption materials are one of the major requirements in many industries with regards to the sound insulation developed should be efficient to reduce sound. This is also important to contribute in economically ways of producing sound absorbing materials which is cheaper and user friendly. Thus, in this research, the sound absorbent properties of bio-polymer foam filled with hybrid fillers of wood dust and waste tire rubber has been investigated. Waste cooking oil from crisp industries was converted into bio-monomer, filled with different proportion ratio of fillers and fabricated into bio-polymer foam composite. Two fabrication methods is applied which is the Close Mold Method (CMM) and Open Mold Method (OMM). A total of four bio-polymer foam composite samples were produce for each method used. The percentage of hybrid fillers; mixture of wood dust and waste tire rubber of 2.5 %, 5.0%, 7.5% and 10% weight to weight ration with bio-monomer. The sound absorption of the bio-polymer foam composites samples were tested by using the impedance tube test according to the ASTM E-1050 and Scanning Electron Microscope to determine the morphology and porosity of the samples. The sound absorption coefficient (α) at different frequency range revealed that the polymer foam of 10.0 % hybrid fillers shows highest α of 0.963. The highest hybrid filler loading contributing to smallest pore sizes but highest interconnected pores. This also revealed that when highly porous material is exposed to incident sound waves, the air molecules at the surface of the material and within the pores of the material are forced to vibrate and loses some of their original energy. This is concluded that the suitability of bio-polymer foam filled with hybrid fillers to be used in acoustic application of automotive components such as dashboards, door panels, cushion and etc.

  16. Quantization and Quantum-Like Phenomena: A Number Amplitude Approach

    NASA Astrophysics Data System (ADS)

    Robinson, T. R.; Haven, E.

    2015-12-01

    Historically, quantization has meant turning the dynamical variables of classical mechanics that are represented by numbers into their corresponding operators. Thus the relationships between classical variables determine the relationships between the corresponding quantum mechanical operators. Here, we take a radically different approach to this conventional quantization procedure. Our approach does not rely on any relations based on classical Hamiltonian or Lagrangian mechanics nor on any canonical quantization relations, nor even on any preconceptions of particle trajectories in space and time. Instead we examine the symmetry properties of certain Hermitian operators with respect to phase changes. This introduces harmonic operators that can be identified with a variety of cyclic systems, from clocks to quantum fields. These operators are shown to have the characteristics of creation and annihilation operators that constitute the primitive fields of quantum field theory. Such an approach not only allows us to recover the Hamiltonian equations of classical mechanics and the Schrödinger wave equation from the fundamental quantization relations, but also, by freeing the quantum formalism from any physical connotation, makes it more directly applicable to non-physical, so-called quantum-like systems. Over the past decade or so, there has been a rapid growth of interest in such applications. These include, the use of the Schrödinger equation in finance, second quantization and the number operator in social interactions, population dynamics and financial trading, and quantum probability models in cognitive processes and decision-making. In this paper we try to look beyond physical analogies to provide a foundational underpinning of such applications.

  17. Effect on tomato plant and fruit of the application of biopolymer-oregano essential oil coatings.

    PubMed

    Perdones, Ángela; Tur, Núria; Chiralt, Amparo; Vargas, Maria

    2016-10-01

    Oregano essential oil (EO) was incorporated into film-forming dispersions (FFDs) based on biopolymers (chitosan and/or methylcellulose) at two different concentrations. The effect of the application of the FFDs was evaluated on tomato plants (cultivar Micro-Tom) at three different stages of development, and on pre-harvest and postharvest applications on tomato fruit. The application of the FFDs at '3 Leaves' stage caused phytotoxic problems, which were lethal when the EO was applied without biopolymers. Even though plant growth and development were delayed, the total biomass and the crop yield were not affected by biopolymer-EO treatments. When the FFDs were applied in the 'Fruit' stage the pre-harvest application of FFDs had no negative effects. All FFDs containing EO significantly reduced the respiration rate of tomato fruit and diminished weight loss during storage. Moreover, biopolymer-EO FFDs led to a decrease in the fungal decay of tomato fruit inoculated with Rhizopus stolonifer spores, as compared with non-treated tomato fruit and those coated with FFDs without EO. The application of biopolymer-oregano essential oil coatings has been proven to be an effective treatment to control R. stolonifer in tomato fruit. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  18. Quantized magnetoresistance in atomic-size contacts.

    PubMed

    Sokolov, Andrei; Zhang, Chunjuan; Tsymbal, Evgeny Y; Redepenning, Jody; Doudin, Bernard

    2007-03-01

    When the dimensions of a metallic conductor are reduced so that they become comparable to the de Broglie wavelengths of the conduction electrons, the absence of scattering results in ballistic electron transport and the conductance becomes quantized. In ferromagnetic metals, the spin angular momentum of the electrons results in spin-dependent conductance quantization and various unusual magnetoresistive phenomena. Theorists have predicted a related phenomenon known as ballistic anisotropic magnetoresistance (BAMR). Here we report the first experimental evidence for BAMR by observing a stepwise variation in the ballistic conductance of cobalt nanocontacts as the direction of an applied magnetic field is varied. Our results show that BAMR can be positive and negative, and exhibits symmetric and asymmetric angular dependences, consistent with theoretical predictions.

  19. A biopolymer-like metal enabled hybrid material with exceptional mechanical prowess

    PubMed Central

    Zhang, Junsong; Cui, Lishan; Jiang, Daqiang; Liu, Yinong; Hao, Shijie; Ren, Yang; Han, Xiaodong; Liu, Zhenyang; Wang, Yunzhi; Yu, Cun; Huan, Yong; Zhao, Xinqing; Zheng, Yanjun; Xu, Huibin; Ren, Xiaobing; Li, Xiaodong

    2015-01-01

    The design principles for naturally occurring biological materials have inspired us to develop next-generation engineering materials with remarkable performance. Nacre, commonly referred to as nature's armor, is renowned for its unusual combination of strength and toughness. Nature's wisdom in nacre resides in its elaborate structural design and the judicious placement of a unique organic biopolymer with intelligent deformation features. However, up to now, it is still a challenge to transcribe the biopolymer's deformation attributes into a stronger substitute in the design of new materials. In this study, we propose a new design strategy that employs shape memory alloy to transcribe the “J-curve” mechanical response and uniform molecular/atomic level deformation of the organic biopolymer in the design of high-performance hybrid materials. This design strategy is verified in a TiNi-Ti3Sn model material system. The model material demonstrates an exceptional combination of mechanical properties that are superior to other high-performance metal-based lamellar composites known to date. Our design strategy creates new opportunities for the development of high-performance bio-inspired materials. PMID:25665501

  20. A biopolymer-like metal enabled hybrid material with exceptional mechanical prowess.

    PubMed

    Zhang, Junsong; Cui, Lishan; Jiang, Daqiang; Liu, Yinong; Hao, Shijie; Ren, Yang; Han, Xiaodong; Liu, Zhenyang; Wang, Yunzhi; Yu, Cun; Huan, Yong; Zhao, Xinqing; Zheng, Yanjun; Xu, Huibin; Ren, Xiaobing; Li, Xiaodong

    2015-02-10

    The design principles for naturally occurring biological materials have inspired us to develop next-generation engineering materials with remarkable performance. Nacre, commonly referred to as nature's armor, is renowned for its unusual combination of strength and toughness. Nature's wisdom in nacre resides in its elaborate structural design and the judicious placement of a unique organic biopolymer with intelligent deformation features. However, up to now, it is still a challenge to transcribe the biopolymer's deformation attributes into a stronger substitute in the design of new materials. In this study, we propose a new design strategy that employs shape memory alloy to transcribe the "J-curve" mechanical response and uniform molecular/atomic level deformation of the organic biopolymer in the design of high-performance hybrid materials. This design strategy is verified in a TiNi-Ti3Sn model material system. The model material demonstrates an exceptional combination of mechanical properties that are superior to other high-performance metal-based lamellar composites known to date. Our design strategy creates new opportunities for the development of high-performance bio-inspired materials.

  1. Response of two-band systems to a single-mode quantized field

    NASA Astrophysics Data System (ADS)

    Shi, Z. C.; Shen, H. Z.; Wang, W.; Yi, X. X.

    2016-03-01

    The response of topological insulators (TIs) to an external weakly classical field can be expressed in terms of Kubo formula, which predicts quantized Hall conductivity of the quantum Hall family. The response of TIs to a single-mode quantized field, however, remains unexplored. In this work, we take the quantum nature of the external field into account and define a Hall conductance to characterize the linear response of a two-band system to the quantized field. The theory is then applied to topological insulators. Comparisons with the traditional Hall conductance are presented and discussed.

  2. Thermal distributions of first, second and third quantization

    NASA Astrophysics Data System (ADS)

    McGuigan, Michael

    1989-05-01

    We treat first quantized string theory as two-dimensional gravity plus matter. This allows us to compute the two-dimensional density of one string states by the method of Darwin and Fowler. One can then use second quantized methods to form a grand microcanonical ensemble in which one can compute the density of multistring states of arbitrary momentum and mass. It is argued that modelling an elementary particle as a d-1-dimensional object whose internal degrees of freedom are described by a massless d-dimensional gas yields a density of internal states given by σ d(m)∼m -aexp((bm) {2(d-1)}/{d}) . This indicates that these objects cannot be in thermal equilibrium at any temperature unless d⩽2; that is for a string or a particle. Finally, we discuss the application of the above ideas to four-dimensional gravity and introduce an ensemble of multiuniverse states parameterized by second quantized canonical momenta and particle number.

  3. Translocation of a heterogeneous polymer

    PubMed Central

    Mirigian, Stephen; Wang, Yanbo; Muthukumar, Murugappan

    2012-01-01

    We present results on the sequence dependence of translocation kinetics for a partially charged heteropolymer moving through a very thin pore using theoretical tools and Langevin dynamics simulational techniques. The chain is composed of two types of monomers of differing frictional interaction with the pore and charge. We present exact analytical expressions for passage probability, mean first passage time, and mean successful passage times for both reflecting/absorbing and absorbing/absorbing boundary conditions, showing rich and unexpected dependence of translocation behavior on charge fraction, distribution along the chain, and electric field configuration. We find excellent qualitative and good quantitative agreement between theoretical and simulation results. Surprisingly, there emerges a threshold charge fraction of a diblock copolymer beyond which the success rate of translocation is independent of charge fraction. Also, the mean successful translocation time of a diblock copolymer displays non-monotonic behavior with increasing length of the charged block; there is an optimum length of the charged block where the mean translocation rate is the slowest; and there can be a substantial range of higher charge fractions which make the translocation slower than even a minimally charged chain. Additionally, we find for a fixed total charge on the chain, finer distribution along the backbone significantly decreases mean translocation time. PMID:22897308

  4. Problems with mitigation translocation of herpetofauna.

    PubMed

    Sullivan, Brian K; Nowak, Erika M; Kwiatkowski, Matthew A

    2015-02-01

    Mitigation translocation of nuisance animals is a commonly used management practice aimed at resolution of human-animal conflict by removal and release of an individual animal. Long considered a reasonable undertaking, especially by the general public, it is now known that translocated subjects are negatively affected by the practice. Mitigation translocation is typically undertaken with individual adult organisms and has a much lower success rate than the more widely practiced conservation translocation of threatened and endangered species. Nonetheless, the public and many conservation practitioners believe that because population-level conservation translocations have been successful that mitigation translocation can be satisfactorily applied to a wide variety of human-wildlife conflict situations. We reviewed mitigation translocations of reptiles, including our own work with 3 long-lived species (Gila monsters [Heloderma suspectum], Sonoran desert tortoises [Gopherus morafkai], and western diamond-backed rattlesnakes [Crotalus atrox]). Overall, mitigation translocation had a low success rate when judged either by effects on individuals (in all studies reviewed they exhibited increased movement or increased mortality) or by the success of the resolution of the human-animal conflict (translocated individuals often returned to the capture site). Careful planning and identification of knowledge gaps are critical to increasing success rates in mitigation translocations in the face of increasing pressure to find solutions for species threatened by diverse anthropogenic factors, including climate change and exurban and energy development. © 2014 Society for Conservation Biology.

  5. Unique Fock quantization of scalar cosmological perturbations

    NASA Astrophysics Data System (ADS)

    Fernández-Méndez, Mikel; Mena Marugán, Guillermo A.; Olmedo, Javier; Velhinho, José M.

    2012-05-01

    We investigate the ambiguities in the Fock quantization of the scalar perturbations of a Friedmann-Lemaître-Robertson-Walker model with a massive scalar field as matter content. We consider the case of compact spatial sections (thus avoiding infrared divergences), with the topology of a three-sphere. After expanding the perturbations in series of eigenfunctions of the Laplace-Beltrami operator, the Hamiltonian of the system is written up to quadratic order in them. We fix the gauge of the local degrees of freedom in two different ways, reaching in both cases the same qualitative results. A canonical transformation, which includes the scaling of the matter-field perturbations by the scale factor of the geometry, is performed in order to arrive at a convenient formulation of the system. We then study the quantization of these perturbations in the classical background determined by the homogeneous variables. Based on previous work, we introduce a Fock representation for the perturbations in which: (a) the complex structure is invariant under the isometries of the spatial sections and (b) the field dynamics is implemented as a unitary operator. These two properties select not only a unique unitary equivalence class of representations, but also a preferred field description, picking up a canonical pair of field variables among all those that can be obtained by means of a time-dependent scaling of the matter field (completed into a linear canonical transformation). Finally, we present an equivalent quantization constructed in terms of gauge-invariant quantities. We prove that this quantization can be attained by a mode-by-mode time-dependent linear canonical transformation which admits a unitary implementation, so that it is also uniquely determined.

  6. Surface enhaced raman scattering (SERS) with biopolymer encapsulated silver nanosubstrates for rapid detection of foodborne pathogens

    USDA-ARS?s Scientific Manuscript database

    A biopolymer encapsulated with silver nanoparticles was prepared using polyvinyl alcohol (PVA) solution, silver nitrate, and trisodium citrate. Biopolymer based nanosubstrates were deposited on a mica sheet for SERS. Fresh cultures of Salmonella Typhimurium, Escherichia coli, Staphylococcus aureus a...

  7. A Algebraic Approach to the Quantization of Constrained Systems: Finite Dimensional Examples.

    NASA Astrophysics Data System (ADS)

    Tate, Ranjeet Shekhar

    1992-01-01

    General relativity has two features in particular, which make it difficult to apply to it existing schemes for the quantization of constrained systems. First, there is no background structure in the theory, which could be used, e.g., to regularize constraint operators, to identify a "time" or to define an inner product on physical states. Second, in the Ashtekar formulation of general relativity, which is a promising avenue to quantum gravity, the natural variables for quantization are not canonical; and, classically, there are algebraic identities between them. Existing schemes are usually not concerned with such identities. Thus, from the point of view of canonical quantum gravity, it has become imperative to find a framework for quantization which provides a general prescription to find the physical inner product, and is flexible enough to accommodate non -canonical variables. In this dissertation I present an algebraic formulation of the Dirac approach to the quantization of constrained systems. The Dirac quantization program is augmented by a general principle to find the inner product on physical states. Essentially, the Hermiticity conditions on physical operators determine this inner product. I also clarify the role in quantum theory of possible algebraic identities between the elementary variables. I use this approach to quantize various finite dimensional systems. Some of these models test the new aspects of the algebraic framework. Others bear qualitative similarities to general relativity, and may give some insight into the pitfalls lurking in quantum gravity. The previous quantizations of one such model had many surprising features. When this model is quantized using the algebraic program, there is no longer any unexpected behaviour. I also construct the complete quantum theory for a previously unsolved relativistic cosmology. All these models indicate that the algebraic formulation provides powerful new tools for quantization. In (spatially compact

  8. Subband Image Coding with Jointly Optimized Quantizers

    NASA Technical Reports Server (NTRS)

    Kossentini, Faouzi; Chung, Wilson C.; Smith Mark J. T.

    1995-01-01

    An iterative design algorithm for the joint design of complexity- and entropy-constrained subband quantizers and associated entropy coders is proposed. Unlike conventional subband design algorithms, the proposed algorithm does not require the use of various bit allocation algorithms. Multistage residual quantizers are employed here because they provide greater control of the complexity-performance tradeoffs, and also because they allow efficient and effective high-order statistical modeling. The resulting subband coder exploits statistical dependencies within subbands, across subbands, and across stages, mainly through complexity-constrained high-order entropy coding. Experimental results demonstrate that the complexity-rate-distortion performance of the new subband coder is exceptional.

  9. Biopolymer as an Alternative to Petroleum-based Polymers to Control Soil Erosion: Iowa Army Ammunition Plant

    DTIC Science & Technology

    2013-11-01

    surface. Biopolymer (first application), and biopolymer plus seed (second application), were applied using a hydroseeder. 20 Figure 9. Initial...fluid replacement. Replacement fluids can be commercial mixes such as water, Gatorade, or fruit juices . • Work/Rest Regimens: Implementation of a

  10. Corrosion Inhibition of High Speed Steel by Biopolymer HPMC Derivatives

    PubMed Central

    Shi, Shih-Chen; Su, Chieh-Chang

    2016-01-01

    The corrosion inhibition characteristics of the derivatives of biopolymer hydroxypropyl methylcellulose (HPMC), hydroxypropyl methylcellulose phthalate (HPMCP), and hydroxypropyl methylcellulose acetate succinate (HPMCAS) film are investigated. Based on electrochemical impedance spectroscopic measurements and potentiodynamic polarization, the corrosion inhibition performance of high speed steel coated with HPMC derivatives is evaluated. The Nyquist plot and Tafel polarization demonstrate promising anti-corrosion performance of HPMC and HPMCP. With increasing film thickness, both materials reveal improvement in corrosion inhibition. Moreover, because of a hydrophobic surface and lower moisture content, HPMCP shows better anti-corrosion performance than HPMCAS. The study is of certain importance for designing green corrosion inhibitors of high speed steel surfaces by the use of biopolymer derivatives. PMID:28773733

  11. Quantized impedance dealing with the damping behavior of the one-dimensional oscillator

    NASA Astrophysics Data System (ADS)

    Zhu, Jinghao; Zhang, Jing; Li, Yuan; Zhang, Yong; Fang, Zhengji; Zhao, Peide; Li, Erping

    2015-11-01

    A quantized impedance is proposed to theoretically establish the relationship between the atomic eigenfrequency and the intrinsic frequency of the one-dimensional oscillator in this paper. The classical oscillator is modified by the idea that the electron transition is treated as a charge-discharge process of a suggested capacitor with the capacitive energy equal to the energy level difference of the jumping electron. The quantized capacitance of the impedance interacting with the jumping electron can lead the resonant frequency of the oscillator to the same as the atomic eigenfrequency. The quantized resistance reflects that the damping coefficient of the oscillator is the mean collision frequency of the transition electron. In addition, the first and third order electric susceptibilities based on the oscillator are accordingly quantized. Our simulation of the hydrogen atom emission spectrum based on the proposed method agrees well with the experimental one. Our results exhibits that the one-dimensional oscillator with the quantized impedance may become useful in the estimations of the refractive index and one- or multi-photon absorption coefficients of some nonmagnetic media composed of hydrogen-like atoms.

  12. Magnetic quantization in monolayer bismuthene

    NASA Astrophysics Data System (ADS)

    Chen, Szu-Chao; Chiu, Chih-Wei; Lin, Hui-Chi; Lin, Ming-Fa

    The magnetic quantization in monolayer bismuthene is investigated by the generalized tight-binding model. The quite large Hamiltonian matrix is built from the tight-binding functions of the various sublattices, atomic orbitals and spin states. Due to the strong spin orbital coupling and sp3 bonding, monolayer bismuthene has the diverse low-lying energy bands such as the parabolic, linear and oscillating energy bands. The main features of band structures are further reflected in the rich magnetic quantization. Under a uniform perpendicular magnetic field (Bz) , three groups of Landau levels (LLs) with distinct features are revealed near the Fermi level. Their Bz-dependent energy spectra display the linear, square-root and non-monotonous dependences, respectively. These LLs are dominated by the combinations of the 6pz orbital and (6px,6py) orbitals as a result of strong sp3 bonding. Specifically, the LL anti-crossings only occur between LLs originating from the oscillating energy band.

  13. Weighted Bergman Kernels and Quantization}

    NASA Astrophysics Data System (ADS)

    Engliš, Miroslav

    Let Ω be a bounded pseudoconvex domain in CN, φ, ψ two positive functions on Ω such that - log ψ, - log φ are plurisubharmonic, and z∈Ω a point at which - log φ is smooth and strictly plurisubharmonic. We show that as k-->∞, the Bergman kernels with respect to the weights φkψ have an asymptotic expansion for x,y near z, where φ(x,y) is an almost-analytic extension of &\\phi(x)=φ(x,x) and similarly for ψ. Further, . If in addition Ω is of finite type, φ,ψ behave reasonably at the boundary, and - log φ, - log ψ are strictly plurisubharmonic on Ω, we obtain also an analogous asymptotic expansion for the Berezin transform and give applications to the Berezin quantization. Finally, for Ω smoothly bounded and strictly pseudoconvex and φ a smooth strictly plurisubharmonic defining function for Ω, we also obtain results on the Berezin-Toeplitz quantization.

  14. The Holographic Electron Density Theorem, de-quantization, re-quantization, and nuclear charge space extrapolations of the Universal Molecule Model

    NASA Astrophysics Data System (ADS)

    Mezey, Paul G.

    2017-11-01

    Two strongly related theorems on non-degenerate ground state electron densities serve as the basis of "Molecular Informatics". The Hohenberg-Kohn theorem is a statement on global molecular information, ensuring that the complete electron density contains the complete molecular information. However, the Holographic Electron Density Theorem states more: the local information present in each and every positive volume density fragment is already complete: the information in the fragment is equivalent to the complete molecular information. In other words, the complete molecular information provided by the Hohenberg-Kohn Theorem is already provided, in full, by any positive volume, otherwise arbitrarily small electron density fragment. In this contribution some of the consequences of the Holographic Electron Density Theorem are discussed within the framework of the "Nuclear Charge Space" and the Universal Molecule Model. In the Nuclear Charge Space" the nuclear charges are regarded as continuous variables, and in the more general Universal Molecule Model some other quantized parameteres are also allowed to become "de-quantized and then re-quantized, leading to interrelations among real molecules through abstract molecules. Here the specific role of the Holographic Electron Density Theorem is discussed within the above context.

  15. Optimal sampling and quantization of synthetic aperture radar signals

    NASA Technical Reports Server (NTRS)

    Wu, C.

    1978-01-01

    Some theoretical and experimental results on optimal sampling and quantization of synthetic aperture radar (SAR) signals are presented. It includes a description of a derived theoretical relationship between the pixel signal to noise ratio of processed SAR images and the number of quantization bits per sampled signal, assuming homogeneous extended targets. With this relationship known, a solution may be realized for the problem of optimal allocation of a fixed data bit-volume (for specified surface area and resolution criterion) between the number of samples and the number of bits per sample. The results indicate that to achieve the best possible image quality for a fixed bit rate and a given resolution criterion, one should quantize individual samples coarsely and thereby maximize the number of multiple looks. The theoretical results are then compared with simulation results obtained by processing aircraft SAR data.

  16. Splitting Times of Doubly Quantized Vortices in Dilute Bose-Einstein Condensates

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Huhtamaeki, J. A. M.; Pietilae, V.; Virtanen, S. M. M.

    2006-09-15

    Recently, the splitting of a topologically created doubly quantized vortex into two singly quantized vortices was experimentally investigated in dilute atomic cigar-shaped Bose-Einstein condensates [Y. Shin et al., Phys. Rev. Lett. 93, 160406 (2004)]. In particular, the dependency of the splitting time on the peak particle density was studied. We present results of theoretical simulations which closely mimic the experimental setup. We show that the combination of gravitational sag and time dependency of the trapping potential alone suffices to split the doubly quantized vortex in time scales which are in good agreement with the experiments.

  17. Integrated bioconversion of syngas into bioethanol and biopolymers.

    PubMed

    Lagoa-Costa, Borja; Abubackar, Haris Nalakath; Fernández-Romasanta, María; Kennes, Christian; Veiga, María C

    2017-09-01

    Syngas bioconversion is a promising method for bioethanol production, but some VFA remains at the end of fermentation. A two-stage process was set-up, including syngas fermentation as first stage under strict anaerobic conditions using C. autoethanogenum as inoculum, with syngas (CO/CO 2 /H 2 /N 2 , 30/10/20/40) as gaseous substrate. The second stage consisted in various fed-batch assays using a highly enriched PHA accumulating biomass as inoculum, where the potential for biopolymer production from the remaining acetic acid at the end of the syngas fermentation was evaluated. All of the acetic acid was consumed and accumulated as biopolymer, while ethanol and 2,3-butanediol remained basically unused. It can be concluded that a high C/N ratio in the effluent from the syngas fermentation stage was responsible for non-consumption of alcohols. A maximum PHA content of 24% was reached at the end of the assay. Copyright © 2017 Elsevier Ltd. All rights reserved.

  18. Polyhydroxybutyrate (PHB) Synthesis by Spirulina sp. LEB 18 Using Biopolymer Extraction Waste.

    PubMed

    da Silva, Cleber Klasener; Costa, Jorge Alberto Vieira; de Morais, Michele Greque

    2018-01-20

    The reuse of waste as well as the production of biodegradable compounds has for years been the object of studies and of global interest as a way to reduce the environmental impact generated by unsustainable exploratory processes. The conversion of linear processes into cyclical processes has environmental and economic advantages, reducing waste deposition and reducing costs. The objective of this work was to use biopolymer extraction waste in the cultivation of Spirulina sp. LEB 18, for the cyclic process of polyhydroxybutyrate (PHB) synthesis. Concentrations of 10, 15, 20, 25, and 30% (v/v) of biopolymer extraction waste were tested. For comparison, two assays were used without addition of waste, Zarrouk (SZ) and modified Zarrouk (ZM), with reduction of nitrogen. The assays were carried out in triplicate and evaluated for the production of microalgal biomass and PHB. The tests with addition of waste presented a biomass production statistically equal to ZM (0.79 g L -1 ) (p < 0.1). The production of PHB in the assay containing 25% of waste was higher when compared to the other cultivations, obtaining 10.6% (w/w) of biopolymer. From the results obtained, it is affirmed that the use of PHB extraction waste in the microalgal cultivation, aiming at the synthesis of biopolymers, can occur in a cyclic process, reducing process costs and the deposition of waste, thus favoring the preservation of the environment.

  19. Educational Information Quantization for Improving Content Quality in Learning Management Systems

    ERIC Educational Resources Information Center

    Rybanov, Alexander Aleksandrovich

    2014-01-01

    The article offers the educational information quantization method for improving content quality in Learning Management Systems. The paper considers questions concerning analysis of quality of quantized presentation of educational information, based on quantitative text parameters: average frequencies of parts of speech, used in the text; formal…

  20. Dynamic State Estimation of Power Systems With Quantization Effects: A Recursive Filter Approach.

    PubMed

    Hu, Liang; Wang, Zidong; Liu, Xiaohui

    2016-08-01

    In this paper, a recursive filter algorithm is developed to deal with the state estimation problem for power systems with quantized nonlinear measurements. The measurements from both the remote terminal units and the phasor measurement unit are subject to quantizations described by a logarithmic quantizer. Attention is focused on the design of a recursive filter such that, in the simultaneous presence of nonlinear measurements and quantization effects, an upper bound for the estimation error covariance is guaranteed and subsequently minimized. Instead of using the traditional approximation methods in nonlinear estimation that simply ignore the linearization errors, we treat both the linearization and quantization errors as norm-bounded uncertainties in the algorithm development so as to improve the performance of the estimator. For the power system with such kind of introduced uncertainties, a filter is designed in the framework of robust recursive estimation, and the developed filter algorithm is tested on the IEEE benchmark power system to demonstrate its effectiveness.

  1. On Correspondence of BRST-BFV, Dirac, and Refined Algebraic Quantizations of Constrained Systems

    NASA Astrophysics Data System (ADS)

    Shvedov, O. Yu.

    2002-11-01

    The correspondence between BRST-BFV, Dirac, and refined algebraic (group averaging, projection operator) approaches to quantizing constrained systems is analyzed. For the closed-algebra case, it is shown that the component of the BFV wave function corresponding to maximal (minimal) value of number of ghosts and antighosts in the Schrodinger representation may be viewed as a wave function in the refined algebraic (Dirac) quantization approach. The Giulini-Marolf group averaging formula for the inner product in the refined algebraic quantization approach is obtained from the Batalin-Marnelius prescription for the BRST-BFV inner product, which should be generally modified due to topological problems. The considered prescription for the correspondence of states is observed to be applicable to the open-algebra case. The refined algebraic quantization approach is generalized then to the case of nontrivial structure functions. A simple example is discussed. The correspondence of observables for different quantization methods is also investigated.

  2. Application of heterogeneous pulse coupled neural network in image quantization

    NASA Astrophysics Data System (ADS)

    Huang, Yi; Ma, Yide; Li, Shouliang; Zhan, Kun

    2016-11-01

    On the basis of the different strengths of synaptic connections between actual neurons, this paper proposes a heterogeneous pulse coupled neural network (HPCNN) algorithm to perform quantization on images. HPCNNs are developed from traditional pulse coupled neural network (PCNN) models, which have different parameters corresponding to different image regions. This allows pixels of different gray levels to be classified broadly into two categories: background regional and object regional. Moreover, an HPCNN also satisfies human visual characteristics. The parameters of the HPCNN model are calculated automatically according to these categories, and quantized results will be optimal and more suitable for humans to observe. At the same time, the experimental results of natural images from the standard image library show the validity and efficiency of our proposed quantization method.

  3. Wetting of biopolymer coatings: contact angle kinetics and image analysis investigation.

    PubMed

    Farris, Stefano; Introzzi, Laura; Biagioni, Paolo; Holz, Torsten; Schiraldi, Alberto; Piergiovanni, Luciano

    2011-06-21

    The surface wetting of five biopolymers, used as coating materials for a plastic film, was monitored over a span of 8 min by means of the optical contact angle technique. Because most of the total variation was observed to occur during the first 60 s, we decided to focus on this curtailed temporal window. Initial contact angle values (θ(0)) ranged from ∼91° for chitosan to ∼30° for pullulan. However, the water drop profile began to change immediately following drop deposition for all biocoatings, confirming that the concept of water contact angle equilibrium is not applicable to most biopolymers. First, a three-parameter decay equation [θ(t) = θ(0) exp(kt(n))] was fit to the experimental contact angle data to describe the kinetics of the contact angle change for each biocoating. Interestingly, the k constant correlated well with the contact angle evolution rate and the n exponent seemed to be somehow linked to the physicochemical phenomena underlying the overall kinetics process. Second, to achieve a reliable description of droplet evolution, the contact angle (CA) analysis was coupled with image analysis (IA) through a combined geometric/trigonometric approach. Absorption and spreading were the key factors governing the overall mechanism of surface wetting during the 60 s analysis, although the individual quantification of both phenomena demonstrated that spreading provided the largest contribution for all biopolymers, with the only exception of gelatin, which showed two quasi-equivalent and counterbalancing effects. The possible correlation between these two phenomena and the topography of the biopolymer surfaces are then discussed on the basis of atomic force microscopy analyses. © 2011 American Chemical Society

  4. Suitability of amphibians and reptiles for translocation.

    PubMed

    Germano, Jennifer M; Bishop, Phillip J

    2009-02-01

    Translocations are important tools in the field of conservation. Despite increased use over the last few decades, the appropriateness of translocations for amphibians and reptiles has been debated widely over the past 20 years. To provide a comprehensive evaluation of the suitability of amphibians and reptiles for translocation, we reviewed the results of amphibian and reptile translocation projects published between 1991 and 2006. The success rate of amphibian and reptile translocations reported over this period was twice that reported in an earlier review in 1991. Success and failure rates were independent of the taxonomic class (Amphibia or Reptilia) released. Reptile translocations driven by human-wildlife conflict mitigation had a higher failure rate than those motivated by conservation, and more recent projects of reptile translocations had unknown outcomes. The outcomes of amphibian translocations were significantly related to the number of animals released, with projects releasing over 1000 individuals being most successful. The most common reported causes of translocation failure were homing and migration of introduced individuals out of release sites and poor habitat. The increased success of amphibian and reptile translocations reviewed in this study compared with the 1991 review is encouraging for future conservation projects. Nevertheless, more preparation, monitoring, reporting of results, and experimental testing of techniques and reintroduction questions need to occur to improve translocations of amphibians and reptiles as a whole.

  5. The physicochemical properties of a spray dried glutinous rice starch biopolymer.

    PubMed

    Laovachirasuwan, Pornpun; Peerapattana, Jomjai; Srijesdaruk, Voranuch; Chitropas, Padungkwan; Otsuka, Makoto

    2010-06-15

    Glutinous rice starch (GRS) is a biopolymer used widely in the food industry but not at all in the pharmaceutical industry. There are several ways to modify this biopolymer. Physical modification is simple and cheap because it requires no chemicals or biological agents. The aim of this study was to characterize the physicochemical properties of a spray dried glutinous rice starch (SGRS) produced from pregelatinized GRS. The surface morphology changed from an irregular to concave spherical shape as revealed by Scanning Electron Microscopy (SEM). SGRS was almost amorphous as determined by X-ray Diffraction (XRD) spectroscopy. The water molecules became linked through hydrogen bonds to the exposed hydroxyl group of amorphous SGRS as determined by Near Infrared (NIR) spectroscopy. Then, SGRS formed a colloid gel matrix with water and developed a highly viscous gelatinous form as determined using Differential Scanning Calorimetry (DSC) and a stress control type rheometer. In addition, SGRS can swell and produce a gelatinous surface barrier like a hydrophilic matrix biopolymer which controls drug release. Therefore, a novel application of SGRS is as a sustained release modifier for direct compression tablets in the pharmaceutical industry. Copyright 2010 Elsevier B.V. All rights reserved.

  6. A biopolymer-like metal enabled hybrid material with exceptional mechanical prowess

    DOE PAGES

    Zhang, Junsong; Cui, Lishan; Jiang, Daqiang; ...

    2015-02-10

    In this study, the design principles for naturally occurring biological materials have inspired us to develop next-generation engineering materials with remarkable performance. Nacre, commonly referred to as nature's armor, is renowned for its unusual combination of strength and toughness. Nature's wisdom in nacre resides in its elaborate structural design and the judicious placement of a unique organic biopolymer with intelligent deformation features. However, up to now, it is still a challenge to transcribe the biopolymer's deformation attributes into a stronger substitute in the design of new materials. In this study, we propose a new design strategy that employs shape memorymore » alloy to transcribe the "J-curve'' mechanical response and uniform molecular/atomic level deformation of the organic biopolymer in the design of high-performance hybrid materials. This design strategy is verified in a TiNi-Ti 3Sn model material system. The model material demonstrates an exceptional combination of mechanical properties that are superior to other high-performance metal-based lamellar composites known to date. Our design strategy creates new opportunities for the development of high-performance bio-inspired materials.« less

  7. Quantization of gauge fields, graph polynomials and graph homology

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kreimer, Dirk, E-mail: kreimer@physik.hu-berlin.de; Sars, Matthias; Suijlekom, Walter D. van

    2013-09-15

    We review quantization of gauge fields using algebraic properties of 3-regular graphs. We derive the Feynman integrand at n loops for a non-abelian gauge theory quantized in a covariant gauge from scalar integrands for connected 3-regular graphs, obtained from the two Symanzik polynomials. The transition to the full gauge theory amplitude is obtained by the use of a third, new, graph polynomial, the corolla polynomial. This implies effectively a covariant quantization without ghosts, where all the relevant signs of the ghost sector are incorporated in a double complex furnished by the corolla polynomial–we call it cycle homology–and by graph homology.more » -- Highlights: •We derive gauge theory Feynman from scalar field theory with 3-valent vertices. •We clarify the role of graph homology and cycle homology. •We use parametric renormalization and the new corolla polynomial.« less

  8. Augmenting Phase Space Quantization to Introduce Additional Physical Effects

    NASA Astrophysics Data System (ADS)

    Robbins, Matthew P. G.

    Quantum mechanics can be done using classical phase space functions and a star product. The state of the system is described by a quasi-probability distribution. A classical system can be quantized in phase space in different ways with different quasi-probability distributions and star products. A transition differential operator relates different phase space quantizations. The objective of this thesis is to introduce additional physical effects into the process of quantization by using the transition operator. As prototypical examples, we first look at the coarse-graining of the Wigner function and the damped simple harmonic oscillator. By generalizing the transition operator and star product to also be functions of the position and momentum, we show that additional physical features beyond damping and coarse-graining can be introduced into a quantum system, including the generalized uncertainty principle of quantum gravity phenomenology, driving forces, and decoherence.

  9. Electrical and thermal conductance quantization in nanostructures

    NASA Astrophysics Data System (ADS)

    Nawrocki, Waldemar

    2008-10-01

    In the paper problems of electron transport in mesoscopic structures and nanostructures are considered. The electrical conductance of nanowires was measured in a simple experimental system. Investigations have been performed in air at room temperature measuring the conductance between two vibrating metal wires with standard oscilloscope. Conductance quantization in units of G0 = 2e2/h = (12.9 kΩ)-1 up to five quanta of conductance has been observed for nanowires formed in many metals. The explanation of this universal phenomena is the formation of a nanometer-sized wire (nanowire) between macroscopic metallic contacts which induced, due to theory proposed by Landauer, the quantization of conductance. Thermal problems in nanowires are also discussed in the paper.

  10. Landau quantization effects on hole-acoustic instability in semiconductor plasmas

    NASA Astrophysics Data System (ADS)

    Sumera, P.; Rasheed, A.; Jamil, M.; Siddique, M.; Areeb, F.

    2017-12-01

    The growth rate of the hole acoustic waves (HAWs) exciting in magnetized semiconductor quantum plasma pumped by the electron beam has been investigated. The instability of the waves contains quantum effects including the exchange and correlation potential, Bohm potential, Fermi-degenerate pressure, and the magnetic quantization of semiconductor plasma species. The effects of various plasma parameters, which include relative concentration of plasma particles, beam electron temperature, beam speed, plasma temperature (temperature of electrons/holes), and Landau electron orbital magnetic quantization parameter η, on the growth rate of HAWs, have been discussed. The numerical study of our model of acoustic waves has been applied, as an example, to the GaAs semiconductor exposed to electron beam in the magnetic field environment. An increment in either the concentration of the semiconductor electrons or the speed of beam electrons, in the presence of magnetic quantization of fermion orbital motion, enhances remarkably the growth rate of the HAWs. Although the growth rate of the waves reduces with a rise in the thermal temperature of plasma species, at a particular temperature, we receive a higher instability due to the contribution of magnetic quantization of fermions to it.

  11. Quantized impedance dealing with the damping behavior of the one-dimensional oscillator

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zhu, Jinghao; Zhang, Jing; Li, Yuan

    2015-11-15

    A quantized impedance is proposed to theoretically establish the relationship between the atomic eigenfrequency and the intrinsic frequency of the one-dimensional oscillator in this paper. The classical oscillator is modified by the idea that the electron transition is treated as a charge-discharge process of a suggested capacitor with the capacitive energy equal to the energy level difference of the jumping electron. The quantized capacitance of the impedance interacting with the jumping electron can lead the resonant frequency of the oscillator to the same as the atomic eigenfrequency. The quantized resistance reflects that the damping coefficient of the oscillator is themore » mean collision frequency of the transition electron. In addition, the first and third order electric susceptibilities based on the oscillator are accordingly quantized. Our simulation of the hydrogen atom emission spectrum based on the proposed method agrees well with the experimental one. Our results exhibits that the one-dimensional oscillator with the quantized impedance may become useful in the estimations of the refractive index and one- or multi-photon absorption coefficients of some nonmagnetic media composed of hydrogen-like atoms.« less

  12. Immirzi parameter without Immirzi ambiguity: Conformal loop quantization of scalar-tensor gravity

    NASA Astrophysics Data System (ADS)

    Veraguth, Olivier J.; Wang, Charles H.-T.

    2017-10-01

    Conformal loop quantum gravity provides an approach to loop quantization through an underlying conformal structure i.e. conformally equivalent class of metrics. The property that general relativity itself has no conformal invariance is reinstated with a constrained scalar field setting the physical scale. Conformally equivalent metrics have recently been shown to be amenable to loop quantization including matter coupling. It has been suggested that conformal geometry may provide an extended symmetry to allow a reformulated Immirzi parameter necessary for loop quantization to behave like an arbitrary group parameter that requires no further fixing as its present standard form does. Here, we find that this can be naturally realized via conformal frame transformations in scalar-tensor gravity. Such a theory generally incorporates a dynamical scalar gravitational field and reduces to general relativity when the scalar field becomes a pure gauge. In particular, we introduce a conformal Einstein frame in which loop quantization is implemented. We then discuss how different Immirzi parameters under this description may be related by conformal frame transformations and yet share the same quantization having, for example, the same area gaps, modulated by the scalar gravitational field.

  13. Second quantization in bit-string physics

    NASA Technical Reports Server (NTRS)

    Noyes, H. Pierre

    1993-01-01

    Using a new fundamental theory based on bit-strings, a finite and discrete version of the solutions of the free one particle Dirac equation as segmented trajectories with steps of length h/mc along the forward and backward light cones executed at velocity +/- c are derived. Interpreting the statistical fluctuations which cause the bends in these segmented trajectories as emission and absorption of radiation, these solutions are analogous to a fermion propagator in a second quantized theory. This allows us to interpret the mass parameter in the step length as the physical mass of the free particle. The radiation in interaction with it has the usual harmonic oscillator structure of a second quantized theory. How these free particle masses can be generated gravitationally using the combinatorial hierarchy sequence (3,10,137,2(sup 127) + 136), and some of the predictive consequences are sketched.

  14. Perspectives of Light-Front Quantized Field Theory: Some New Results

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Srivastava, Prem P.

    1999-08-13

    A review of some basic topics in the light-front (LF) quantization of relativistic field theory is made. It is argued that the LF quantization is equally appropriate as the conventional one and that they lead, assuming the microcausality principle, to the same physical content. This is confirmed in the studies on the LF of the spontaneous symmetry breaking (SSB), of the degenerate vacua in Schwinger model (SM) and Chiral SM (CSM), of the chiral boson theory, and of the QCD in covariant gauges among others. The discussion on the LF is more economical and more transparent than that found inmore » the conventional equal-time quantized theory. The removal of the constraints on the LF phase space by following the Dirac method, in fact, results in a substantially reduced number of independent dynamical variables. Consequently, the descriptions of the physical Hilbert space and the vacuum structure, for example, become more tractable. In the context of the Dyson-Wick perturbation theory the relevant propagators in the front form theory are causal. The Wick rotation can then be performed to employ the Euclidean space integrals in momentum space. The lack of manifest covariance becomes tractable, and still more so if we employ, as discussed in the text, the Fourier transform of the fermionic field based on a special construction of the LF spinor. The fact that the hyperplanes x{sup {+-}} = 0 constitute characteristic surfaces of the hyperbolic partial differential equation is found irrelevant in the quantized theory; it seems sufficient to quantize the theory on one of the characteristic hyperplanes.« less

  15. Quantized Iterative Learning Consensus Tracking of Digital Networks With Limited Information Communication.

    PubMed

    Xiong, Wenjun; Yu, Xinghuo; Chen, Yao; Gao, Jie

    2017-06-01

    This brief investigates the quantized iterative learning problem for digital networks with time-varying topologies. The information is first encoded as symbolic data and then transmitted. After the data are received, a decoder is used by the receiver to get an estimate of the sender's state. Iterative learning quantized communication is considered in the process of encoding and decoding. A sufficient condition is then presented to achieve the consensus tracking problem in a finite interval using the quantized iterative learning controllers. Finally, simulation results are given to illustrate the usefulness of the developed criterion.

  16. Biopolymers for Antitumor Implantable Drug Delivery Systems: Recent Advances and Future Outlook.

    PubMed

    Talebian, Sepehr; Foroughi, Javad; Wade, Samantha J; Vine, Kara L; Dolatshahi-Pirouz, Alireza; Mehrali, Mehdi; Conde, João; Wallace, Gordon G

    2018-05-13

    In spite of remarkable improvements in cancer treatments and survivorship, cancer still remains as one of the major causes of death worldwide. Although current standards of care provide encouraging results, they still cause severe systemic toxicity and also fail in preventing recurrence of the disease. In order to address these issues, biomaterial-based implantable drug delivery systems (DDSs) have emerged as promising therapeutic platforms, which allow local administration of drugs directly to the tumor site. Owing to the unique properties of biopolymers, they have been used in a variety of ways to institute biodegradable implantable DDSs that exert precise spatiotemporal control over the release of therapeutic drug. Here, the most recent advances in biopolymer-based DDSs for suppressing tumor growth and preventing tumor recurrence are reviewed. Novel emerging biopolymers as well as cutting-edge polymeric microdevices deployed as implantable antitumor DDSs are discussed. Finally, a review of a new therapeutic modality within the field, which is based on implantable biopolymeric DDSs, is given. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Printed Biopolymer-Based Electro-Optic Device Components

    DTIC Science & Technology

    2013-07-01

    devices and fabricated e-beam lithography-based master molds. Printed micro and nanostructures using a newly developed spin-on nanoprinting (SNAP...polymeric materials. Among the natural biopolymers , deoxyribonucleic acid (DNA) is an attractive material which can be used to make electronic and...photonic devices [2, 3]. If patterned on the micro and nanoscale using a soft lithography technique, high quality biodegradable optical devices can be

  18. Achieving biopolymer synergy in systems chemistry.

    PubMed

    Bai, Yushi; Chotera, Agata; Taran, Olga; Liang, Chen; Ashkenasy, Gonen; Lynn, David G

    2018-05-31

    Synthetic and materials chemistry initiatives have enabled the translation of the macromolecular functions of biology into synthetic frameworks. These explorations into alternative chemistries of life attempt to capture the versatile functionality and adaptability of biopolymers in new orthogonal scaffolds. Information storage and transfer, however, so beautifully represented in the central dogma of biology, require multiple components functioning synergistically. Over a single decade, the emerging field of systems chemistry has begun to catalyze the construction of mutualistic biopolymer networks, and this review begins with the foundational small-molecule-based dynamic chemical networks and peptide amyloid-based dynamic physical networks on which this effort builds. The approach both contextualizes the versatile approaches that have been developed to enrich chemical information in synthetic networks and highlights the properties of amyloids as potential alternative genetic elements. The successful integration of both chemical and physical networks through β-sheet assisted replication processes further informs the synergistic potential of these networks. Inspired by the cooperative synergies of nucleic acids and proteins in biology, synthetic nucleic-acid-peptide chimeras are now being explored to extend their informational content. With our growing range of synthetic capabilities, structural analyses, and simulation technologies, this foundation is radically extending the structural space that might cross the Darwinian threshold for the origins of life as well as creating an array of alternative systems capable of achieving the progressive growth of novel informational materials.

  19. Simultaneous fault detection and control design for switched systems with two quantized signals.

    PubMed

    Li, Jian; Park, Ju H; Ye, Dan

    2017-01-01

    The problem of simultaneous fault detection and control design for switched systems with two quantized signals is presented in this paper. Dynamic quantizers are employed, respectively, before the output is passed to fault detector, and before the control input is transmitted to the switched system. Taking the quantized errors into account, the robust performance for this kind of system is given. Furthermore, sufficient conditions for the existence of fault detector/controller are presented in the framework of linear matrix inequalities, and fault detector/controller gains and the supremum of quantizer range are derived by a convex optimized method. Finally, two illustrative examples demonstrate the effectiveness of the proposed method. Copyright © 2016 ISA. Published by Elsevier Ltd. All rights reserved.

  20. Locally adaptive vector quantization: Data compression with feature preservation

    NASA Technical Reports Server (NTRS)

    Cheung, K. M.; Sayano, M.

    1992-01-01

    A study of a locally adaptive vector quantization (LAVQ) algorithm for data compression is presented. This algorithm provides high-speed one-pass compression and is fully adaptable to any data source and does not require a priori knowledge of the source statistics. Therefore, LAVQ is a universal data compression algorithm. The basic algorithm and several modifications to improve performance are discussed. These modifications are nonlinear quantization, coarse quantization of the codebook, and lossless compression of the output. Performance of LAVQ on various images using irreversible (lossy) coding is comparable to that of the Linde-Buzo-Gray algorithm, but LAVQ has a much higher speed; thus this algorithm has potential for real-time video compression. Unlike most other image compression algorithms, LAVQ preserves fine detail in images. LAVQ's performance as a lossless data compression algorithm is comparable to that of Lempel-Ziv-based algorithms, but LAVQ uses far less memory during the coding process.

  1. Image compression system and method having optimized quantization tables

    NASA Technical Reports Server (NTRS)

    Ratnakar, Viresh (Inventor); Livny, Miron (Inventor)

    1998-01-01

    A digital image compression preprocessor for use in a discrete cosine transform-based digital image compression device is provided. The preprocessor includes a gathering mechanism for determining discrete cosine transform statistics from input digital image data. A computing mechanism is operatively coupled to the gathering mechanism to calculate a image distortion array and a rate of image compression array based upon the discrete cosine transform statistics for each possible quantization value. A dynamic programming mechanism is operatively coupled to the computing mechanism to optimize the rate of image compression array against the image distortion array such that a rate-distortion-optimal quantization table is derived. In addition, a discrete cosine transform-based digital image compression device and a discrete cosine transform-based digital image compression and decompression system are provided. Also, a method for generating a rate-distortion-optimal quantization table, using discrete cosine transform-based digital image compression, and operating a discrete cosine transform-based digital image compression and decompression system are provided.

  2. Development of a biopolymer nanoparticle-based method of oral toxicity testing in aquatic invertebrates.

    PubMed

    Gott, Ryan C; Luo, Yangchao; Wang, Qin; Lamp, William O

    2014-06-01

    Aquatic toxicity testing generally focuses on the water absorption/dermal route of exposure to potential toxic chemicals, while much less work has been done on the oral route of exposure. This is due in part to the difficulties of applying traditional oral toxicity testing to aquatic environments, including the tendency for test chemicals to dissolve into water. The use of biopolymer nanoparticles to encapsulate test chemicals onto food to prevent dissolution is one solution presented herein. The biopolymers zein and chitosan were explored for their previously known nanoparticle-forming abilities. Nanoparticles containing the test chemical rhodamine B were formed, applied as films to coat food, and then fed to the test organism, the freshwater amphipod Hyalella azteca. In feeding trials both zein and chitosan nanoparticles showed a significantly lower release rate of rhodamine B into water than food dyed with rhodamine B without biopolymer nanoparticles. Zein nanoparticles also showed better retention ability than chitosan nanoparticles. Both kinds of nanoparticles showed no significant effect on the survival, growth, or feeding behavior of H. azteca. Thus these biopolymers may be an effective system to encapsulate and deliver chemicals to aquatic invertebrates without interfering with common toxicity assessment endpoints like survival and growth. Copyright © 2014 Elsevier Inc. All rights reserved.

  3. Third quantization

    NASA Astrophysics Data System (ADS)

    Seligman, Thomas H.; Prosen, Tomaž

    2010-12-01

    The basic ideas of second quantization and Fock space are extended to density operator states, used in treatments of open many-body systems. This can be done for fermions and bosons. While the former only requires the use of a non-orthogonal basis, the latter requires the introduction of a dual set of spaces. In both cases an operator algebra closely resembling the canonical one is developed and used to define the dual sets of bases. We here concentrated on the bosonic case where the unboundedness of the operators requires the definitions of dual spaces to support the pair of bases. Some applications, mainly to non-equilibrium steady states, will be mentioned.

  4. Third quantization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Seligman, Thomas H.; Centro Internacional de Ciencias, Cuernavaca, Morelos; Prosen, Tomaz

    2010-12-23

    The basic ideas of second quantization and Fock space are extended to density operator states, used in treatments of open many-body systems. This can be done for fermions and bosons. While the former only requires the use of a non-orthogonal basis, the latter requires the introduction of a dual set of spaces. In both cases an operator algebra closely resembling the canonical one is developed and used to define the dual sets of bases. We here concentrated on the bosonic case where the unboundedness of the operators requires the definitions of dual spaces to support the pair of bases. Somemore » applications, mainly to non-equilibrium steady states, will be mentioned.« less

  5. Luminance-model-based DCT quantization for color image compression

    NASA Technical Reports Server (NTRS)

    Ahumada, Albert J., Jr.; Peterson, Heidi A.

    1992-01-01

    A model is developed to approximate visibility thresholds for discrete cosine transform (DCT) coefficient quantization error based on the peak-to-peak luminance of the error image. Experimentally measured visibility thresholds for R, G, and B DCT basis functions can be predicted by a simple luminance-based detection model. This model allows DCT coefficient quantization matrices to be designed for display conditions other than those of the experimental measurements: other display luminances, other veiling luminances, and other spatial frequencies (different pixel spacings, viewing distances, and aspect ratios).

  6. Chromosomal translocations and palindromic AT-rich repeats

    PubMed Central

    Kato, Takema; Kurahashi, Hiroki; Emanuel1, Beverly S.

    2012-01-01

    Repetitive DNA sequences constitute 30% of the human genome, and are often sites of genomic rearrangement. Recently, it has been found that several constitutional translocations, especially those that involve chromosome 22, take place utilizing palindromic sequences on 22q11 and on the partner chromosome. Analysis of translocation junction fragments shows that the breakpoints of such palindrome-mediated translocations are localized at the center of palindromic AT-rich repeats (PATRRs). The presence of PATRRs at the breakpoints, indicates a palindrome-mediated mechanism involved in the generation of these constitutional translocations. Identification of these PATRR-mediated translocations suggests a universal pathway for gross chromosomal rearrangement in the human genome. De novo occurrences of PATRR-mediated translocations can be detected by PCR in normal sperm samples but not somatic cells. Polymorphisms of various PATRRs influence their propensity for adopting a secondary structure, which in turn affects de novo translocation frequency. We propose that the PATRRs form an unstable secondary structure, which leads to double-strand breaks at the center of the PATRR. The double-strand breaks appear to be followed by a non-homologous end-joining repair pathway, ultimately leading to the translocations. This review considers recent findings concerning the mechanism of meiosis-specific, PATRR-mediated translocations. PMID:22402448

  7. PALS: A unique probe for the molecular organisation of biopolymer matrices

    NASA Astrophysics Data System (ADS)

    Roussenova, M.; Alam, M. A.

    2013-06-01

    This short review aims to illustrate the versatility of Positron Annihilation Lifetime Spectroscopy (PALS) when utilized for the characterization of biopolymers (e.g.: starch, fractionated maltooligomers, gelatin and cellulose derivatives) commonly used for the formulation of pharmaceutical encapsulants. By showing examples from a number of recent PALS studies, we illustrate that this technique can be used to probe the changes in thermodynamic state and molecular packing for a wide range of biopolymer matrices as a function of temperature, matrix composition and water content. This provides a basis for establishing composition-structure-property relationships for these materials, which would eventually enable the rational control of their macroscopic properties and the design of optimal encapsulating matrices and intelligent drug delivery systems.

  8. Segmentation of magnetic resonance images using fuzzy algorithms for learning vector quantization.

    PubMed

    Karayiannis, N B; Pai, P I

    1999-02-01

    This paper evaluates a segmentation technique for magnetic resonance (MR) images of the brain based on fuzzy algorithms for learning vector quantization (FALVQ). These algorithms perform vector quantization by updating all prototypes of a competitive network through an unsupervised learning process. Segmentation of MR images is formulated as an unsupervised vector quantization process, where the local values of different relaxation parameters form the feature vectors which are represented by a relatively small set of prototypes. The experiments evaluate a variety of FALVQ algorithms in terms of their ability to identify different tissues and discriminate between normal tissues and abnormalities.

  9. Light-cone quantization of two dimensional field theory in the path integral approach

    NASA Astrophysics Data System (ADS)

    Cortés, J. L.; Gamboa, J.

    1999-05-01

    A quantization condition due to the boundary conditions and the compatification of the light cone space-time coordinate x- is identified at the level of the classical equations for the right-handed fermionic field in two dimensions. A detailed analysis of the implications of the implementation of this quantization condition at the quantum level is presented. In the case of the Thirring model one has selection rules on the excitations as a function of the coupling and in the case of the Schwinger model a double integer structure of the vacuum is derived in the light-cone frame. Two different quantized chiral Schwinger models are found, one of them without a θ-vacuum structure. A generalization of the quantization condition to theories with several fermionic fields and to higher dimensions is presented.

  10. Smart swelling biopolymer microparticles by a microfluidic approach: synthesis, in situ encapsulation and controlled release.

    PubMed

    Fang, Aiping; Cathala, Bernard

    2011-01-01

    This paper reports a microfluidic synthesis of biopolymer microparticles aiming at smart swelling. Monodisperse aqueous emulsion droplets comprising biopolymer and its cross-linking agent were formed in mineral oil and solidified in the winding microfluidic channels by in situ chaotic mixing, which resulted in internal chemical gelation for hydrogels. The achievement of pectin microparticles from in situ mixing pectin with its cross-linking agent, calcium ions, successfully demonstrates the reliability of this microfluidic synthesis approach. In order to achieve hydrogels with smart swelling, the following parameters and their impacts on the swelling behaviour, stability and morphology of microparticles were investigated: (1) the type of biopolymers (alginate or mixture of alginate and carboxymethylcellulose, A-CMC); (2) rapid mixing; (3) concentration and type of cross-linking agent. Superabsorbent microparticles were obtained from A-CMC mixture by using ferric chloride as an additional external cross-linking agent. The in situ encapsulation of a model protein, bovine serum albumin (BSA), was also carried out. As a potential protein drug-delivery system, the BSA release behaviours of the biopolymer particles were studied in simulated gastric and intestinal fluids. Compared with alginate and A-CMC microparticles cross-linked with calcium ions, A-CMC microparticles cross-linked with both calcium and ferric ions demonstrate a significantly delayed release. The controllable release profile, the facile encapsulation as well as their biocompatibility, biodegradability, mucoadhesiveness render this microfluidic approach promising in achieving biopolymer microparticles as protein drug carrier for site-specific release. Copyright © 2010 Elsevier B.V. All rights reserved.

  11. Minimizing the cost of translocation failure with decision-tree models that predict species' behavioral response in translocation sites.

    PubMed

    Ebrahimi, Mehregan; Ebrahimie, Esmaeil; Bull, C Michael

    2015-08-01

    The high number of failures is one reason why translocation is often not recommended. Considering how behavior changes during translocations may improve translocation success. To derive decision-tree models for species' translocation, we used data on the short-term responses of an endangered Australian skink in 5 simulated translocations with different release conditions. We used 4 different decision-tree algorithms (decision tree, decision-tree parallel, decision stump, and random forest) with 4 different criteria (gain ratio, information gain, gini index, and accuracy) to investigate how environmental and behavioral parameters may affect the success of a translocation. We assumed behavioral changes that increased dispersal away from a release site would reduce translocation success. The trees became more complex when we included all behavioral parameters as attributes, but these trees yielded more detailed information about why and how dispersal occurred. According to these complex trees, there were positive associations between some behavioral parameters, such as fight and dispersal, that showed there was a higher chance, for example, of dispersal among lizards that fought than among those that did not fight. Decision trees based on parameters related to release conditions were easier to understand and could be used by managers to make translocation decisions under different circumstances. © 2015 Society for Conservation Biology.

  12. Fedosov Deformation Quantization as a BRST Theory

    NASA Astrophysics Data System (ADS)

    Grigoriev, M. A.; Lyakhovich, S. L.

    The relationship is established between the Fedosov deformation quantization of a general symplectic manifold and the BFV-BRST quantization of constrained dynamical systems. The original symplectic manifold M is presented as a second class constrained surface in the fibre bundle ?*ρM which is a certain modification of a usual cotangent bundle equipped with a natural symplectic structure. The second class system is converted into the first class one by continuation of the constraints into the extended manifold, being a direct sum of ?*ρM and the tangent bundle TM. This extended manifold is equipped with a nontrivial Poisson bracket which naturally involves two basic ingredients of Fedosov geometry: the symplectic structure and the symplectic connection. The constructed first class constrained theory, being equivalent to the original symplectic manifold, is quantized through the BFV-BRST procedure. The existence theorem is proven for the quantum BRST charge and the quantum BRST invariant observables. The adjoint action of the quantum BRST charge is identified with the Abelian Fedosov connection while any observable, being proven to be a unique BRST invariant continuation for the values defined in the original symplectic manifold, is identified with the Fedosov flat section of the Weyl bundle. The Fedosov fibrewise star multiplication is thus recognized as a conventional product of the quantum BRST invariant observables.

  13. From Weyl to Born-Jordan quantization: The Schrödinger representation revisited

    NASA Astrophysics Data System (ADS)

    de Gosson, Maurice A.

    2016-03-01

    The ordering problem has been one of the long standing and much discussed questions in quantum mechanics from its very beginning. Nowadays, there is more or less a consensus among physicists that the right prescription is Weyl's rule, which is closely related to the Moyal-Wigner phase space formalism. We propose in this report an alternative approach by replacing Weyl quantization with the less well-known Born-Jordan quantization. This choice is actually natural if we want the Heisenberg and Schrödinger pictures of quantum mechanics to be mathematically equivalent. It turns out that, in addition, Born-Jordan quantization can be recovered from Feynman's path integral approach provided that one used short-time propagators arising from correct formulas for the short-time action, as observed by Makri and Miller. These observations lead to a slightly different quantum mechanics, exhibiting some unexpected features, and this without affecting the main existing theory; for instance quantizations of physical Hamiltonian functions are the same as in the Weyl correspondence. The differences are in fact of a more subtle nature; for instance, the quantum observables will not correspond in a one-to-one fashion to classical ones, and the dequantization of a Born-Jordan quantum operator is less straightforward than that of the corresponding Weyl operator. The use of Born-Jordan quantization moreover solves the "angular momentum dilemma", which already puzzled L. Pauling. Born-Jordan quantization has been known for some time (but not fully exploited) by mathematicians working in time-frequency analysis and signal analysis, but ignored by physicists. One of the aims of this report is to collect and synthesize these sporadic discussions, while analyzing the conceptual differences with Weyl quantization, which is also reviewed in detail. Another striking feature is that the Born-Jordan formalism leads to a redefinition of phase space quantum mechanics, where the usual Wigner

  14. Quantization of Space-like States in Lorentz-Violating Theories

    NASA Astrophysics Data System (ADS)

    Colladay, Don

    2018-01-01

    Lorentz violation frequently induces modified dispersion relations that can yield space-like states that impede the standard quantization procedures. In certain cases, an extended Hamiltonian formalism can be used to define observer-covariant normalization factors for field expansions and phase space integrals. These factors extend the theory to include non-concordant frames in which there are negative-energy states. This formalism provides a rigorous way to quantize certain theories containing space-like states and allows for the consistent computation of Cherenkov radiation rates in arbitrary frames and avoids singular expressions.

  15. Boletus edulis biologically active biopolymers induce cell cycle arrest in human colon adenocarcinoma cells.

    PubMed

    Lemieszek, Marta Kinga; Cardoso, Claudia; Ferreira Milheiro Nunes, Fernando Hermínio; Ramos Novo Amorim de Barros, Ana Isabel; Marques, Guilhermina; Pożarowski, Piotr; Rzeski, Wojciech

    2013-04-25

    The use of biologically active compounds isolated from edible mushrooms against cancer raises global interest. Anticancer properties are mainly attributed to biopolymers including mainly polysaccharides, polysaccharopeptides, polysaccharide proteins, glycoproteins and proteins. In spite of the fact that Boletus edulis is one of the widely occurring and most consumed edible mushrooms, antitumor biopolymers isolated from it have not been exactly defined and studied so far. The present study is an attempt to extend this knowledge on molecular mechanisms of their anticancer action. The mushroom biopolymers (polysaccharides and glycoproteins) were extracted with hot water and purified by anion-exchange chromatography. The antiproliferative activity in human colon adenocarcinoma cells (LS180) was screened by means of MTT and BrdU assays. At the same time fractions' cytotoxicity was examined on the human colon epithelial cells (CCD 841 CoTr) by means of the LDH assay. Flow cytometry and Western blotting were applied to cell cycle analysis and protein expression involved in anticancer activity of the selected biopolymer fraction. In vitro studies have shown that fractions isolated from Boletus edulis were not toxic against normal colon epithelial cells and in the same concentration range elicited a very prominent antiproliferative effect in colon cancer cells. The best results were obtained in the case of the fraction designated as BE3. The tested compound inhibited cancer cell proliferation which was accompanied by cell cycle arrest in the G0/G1-phase. Growth inhibition was associated with modulation of the p16/cyclin D1/CDK4-6/pRb pathway, an aberration of which is a critical step in the development of many human cancers including colon cancer. Our results indicate that a biopolymer BE3 from Boletus edulis possesses anticancer potential and may provide a new therapeutic/preventive option in colon cancer chemoprevention.

  16. Preimplantation genetic haplotyping a new application for diagnosis of translocation carrier's embryos- preliminary observations of two robertsonian translocation carrier families.

    PubMed

    Shamash, Jana; Rienstein, Shlomit; Wolf-Reznik, Haike; Pras, Elon; Dekel, Michal; Litmanovitch, Talia; Brengauz, Masha; Goldman, Boleslav; Yonath, Hagith; Dor, Jehoshua; Levron, Jacob; Aviram-Goldring, Ayala

    2011-01-01

    Preimplantation genetic diagnosis using fluorescence in-situ hybridization (PGD-FISH) is currently the most common reproductive solution for translocation carriers. However, this technique usually does not differentiate between embryos carrying the balanced form of the translocation and those carrying the homologous normal chromosomes. We developed a new application of preimplantation genetic haplotyping (PGH) that can identify and distinguish between all forms of the translocation status in cleavage stage embryos prior to implantation. Polymorphic markers were used to identify and differentiate between the alleles that carry the translocation and those that are the normal homologous chromosomes. Embryos from two families of robertsonian translocation carriers were successfully analyzed using polymorphic markers haplotyping. Our preliminary results indicate that the PGH is capable of distinguishing between normal, balanced and unbalanced translocation carrier embryos. This method will improve PGD and will enable translocation carriers to avoid transmission of the translocation and the associated medical complications to offspring.

  17. Its Preferential Interactions with Biopolymers Account for Diverse Observed Effects of Trehalose

    PubMed Central

    Hong, Jiang; Gierasch, Lila M.; Liu, Zhicheng

    2015-01-01

    Biopolymer homeostasis underlies the health of organisms, and protective osmolytes have emerged as one strategy used by Nature to preserve biopolymer homeostasis. However, a great deal remains unknown about the mechanism of action of osmolytes. Trehalose, as a prominent example, stabilizes proteins against denaturation by extreme temperature and denaturants, preserves membrane integrity upon freezing or in dry conditions, inhibits polyQ-mediated protein aggregation, and suppresses the aggregation of denatured proteins. The underlying thermodynamic mechanisms of such diverse effects of trehalose remain unclear or controversial. In this study, we applied the surface-additive method developed in the Record laboratory to attack this issue. We characterized the key features of trehalose-biopolymer preferential interactions and found that trehalose has strong unfavorable interactions with aliphatic carbon and significant favorable interactions with amide/anionic oxygen. This dissection has allowed us to elucidate the diverse effects of trehalose and to identify the crucial functional group(s) responsible for its effects. With (semi)quantitative thermodynamic analysis, we discovered that 1) the unfavorable interaction of trehalose with hydrophobic surfaces is the dominant factor in its effect on protein stability, 2) the favorable interaction of trehalose with polar amides enables it to inhibit polyQ-mediated protein aggregation and the aggregation of denatured protein in general, and 3) the favorable interaction of trehalose with phosphate oxygens, together with its unfavorable interaction with aliphatic carbons, enables trehalose to preserve membrane integrity in aqueous solution. These results provide a basis for a full understanding of the role of trehalose in biopolymer homeostasis and the reason behind its evolutionary selection as an osmolyte, as well as for a better application of trehalose as a chemical chaperone. PMID:26153711

  18. Error diffusion concept for multi-level quantization

    NASA Astrophysics Data System (ADS)

    Broja, Manfred; Michalowski, Kristina; Bryngdahl, Olof

    1990-11-01

    The error diffusion binarization procedure is adapted to multi-level quantization. The threshold parameters then available have a noticeable influence on the process. Characteristic features of the technique are shown together with experimental results.

  19. Biopolymer - A beginning towards back to nature

    NASA Astrophysics Data System (ADS)

    Gautam, S.; Gautam, A.

    2018-05-01

    Biopolymer is regarded as a polymer which can be biodegradable. Polyhydroxyalkanoates (PHAs) is one of the biopolymer which can be recovered from biomass. PHAs are naturally conserved in the cytoplasm of the bacterial cell during the growth. Bacteria/microbes store their energy from carbon sources in the form of hydrocarbons. Intracellular stored compounds are tightly linked with entire cell resulting difficulty of separation. The work aims to extract PHAs from biomass effectively. Chemical and mechanical separation of PHA can be done from biomass. A pretreatment of cells before chemical and mechanical separation is also effective for separation of PHA and has been carried out. Chemical extraction of PHA includes digestion of cell wall in acidic or alkaline medium and releasing PHA in broth, later sedimentation recovers PHA. In recent work different chemical methods were carried out to extract PHA of medium chain length. In one of these, sodium hypochlorite was used to denature the protein and chloroform was used for extraction of purified PHA. A recovery upto 96.6%, PHA by dried weight of cell, was obtained which is quite high comparing to reported literature. Other chemical disruption by sodium chloride, sodium hydroxide and hydrogen peroxide with and without pretreatment have also been carried out.

  20. Hydration water dynamics in biopolymers from NMR relaxation in the rotating frame.

    PubMed

    Blicharska, Barbara; Peemoeller, Hartwig; Witek, Magdalena

    2010-12-01

    Assuming dipole-dipole interaction as the dominant relaxation mechanism of protons of water molecules adsorbed onto macromolecule (biopolymer) surfaces we have been able to model the dependences of relaxation rates on temperature and frequency. For adsorbed water molecules the correlation times are of the order of 10(-5)s, for which the dispersion region of spin-lattice relaxation rates in the rotating frame R(1)(ρ)=1/T(1)(ρ) appears over a range of easily accessible B(1) values. Measurements of T(1)(ρ) at constant temperature and different B(1) values then give the "dispersion profiles" for biopolymers. Fitting a theoretical relaxation model to these profiles allows for the estimation of correlation times. This way of obtaining the correlation time is easier and faster than approaches involving measurements of the temperature dependence of R(1)=1/T(1). The T(1)(ρ) dispersion approach, as a tool for molecular dynamics study, has been demonstrated for several hydrated biopolymer systems including crystalline cellulose, starch of different origins (potato, corn, oat, wheat), paper (modern, old) and lyophilized proteins (albumin, lysozyme). Copyright © 2010 Elsevier Inc. All rights reserved.

  1. Combining Vector Quantization and Histogram Equalization.

    ERIC Educational Resources Information Center

    Cosman, Pamela C.; And Others

    1992-01-01

    Discussion of contrast enhancement techniques focuses on the use of histogram equalization with a data compression technique, i.e., tree-structured vector quantization. The enhancement technique of intensity windowing is described, and the use of enhancement techniques for medical images is explained, including adaptive histogram equalization.…

  2. Phase-Quantized Block Noncoherent Communication

    DTIC Science & Technology

    2013-07-01

    2828 IEEE TRANSACTIONS ON COMMUNICATIONS, VOL. 61, NO. 7, JULY 2013 Phase-Quantized Block Noncoherent Communication Jaspreet Singh and Upamanyu...in a carrier asynchronous system. Specifically, we consider transmission over the block noncoherent additive white Gaussian noise channel, and...block noncoherent channel. Several results, based on the symmetry inherent in the channel model, are provided to characterize this transition density

  3. Fine structure constant and quantized optical transparency of plasmonic nanoarrays.

    PubMed

    Kravets, V G; Schedin, F; Grigorenko, A N

    2012-01-24

    Optics is renowned for displaying quantum phenomena. Indeed, studies of emission and absorption lines, the photoelectric effect and blackbody radiation helped to build the foundations of quantum mechanics. Nevertheless, it came as a surprise that the visible transparency of suspended graphene is determined solely by the fine structure constant, as this kind of universality had been previously reserved only for quantized resistance and flux quanta in superconductors. Here we describe a plasmonic system in which relative optical transparency is determined solely by the fine structure constant. The system consists of a regular array of gold nanoparticles fabricated on a thin metallic sublayer. We show that its relative transparency can be quantized in the near-infrared, which we attribute to the quantized contact resistance between the nanoparticles and the metallic sublayer. Our results open new possibilities in the exploration of universal dynamic conductance in plasmonic nanooptics.

  4. Stereolithographic models of the solvent-accessible surface of biopolymers. Topical report

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bradford, J.; Noel, P.; Emery, J.D.

    1996-11-01

    The solvent-accessible surfaces of several biopolymers were calculated. As part of the DOE education outreach activity, two high school students participated in this project. Computer files containing sets of triangles were produced. These files are called stl files and are the ISO 9001 standard. They have been written onto CD-ROMs for distribution to American companies. Stereolithographic models were made of some of them to ensure that the computer calculations were done correctly. Stereolithographic models were made of interleukin 1{beta} (IL-1{beta}), three antibodies (an anti-p-azobenzene arsonate, an anti-Brucella A cell wall polysaccharide, and an HIV neutralizing antibody), a triple stranded coiledmore » coil, and an engrailed homeodomain. Also, the biopolymers and their files are described.« less

  5. Enzyme and metabolic engineering for the production of novel biopolymers: crossover of biological and chemical processes.

    PubMed

    Matsumoto, Ken'ichiro; Taguchi, Seiichi

    2013-12-01

    The development of synthetic biology has transformed microbes into useful factories for producing valuable polymers and/or their precursors from renewable biomass. Recent progress at the interface of chemistry and biology has enabled the production of a variety of new biopolymers with properties that substantially differ from their petroleum-derived counterparts. This review touches on recent trials and achievements in the field of biopolymer synthesis, including chemo-enzymatically synthesized aliphatic polyesters, wholly biosynthesized lactate-based polyesters, polyhydroxyalkanoates and other unusual bacterially synthesized polyesters. The expanding diversities in structure and the material properties of biopolymers are key for exploring practical applications. The enzyme and metabolic engineering approaches toward this goal are discussed by shedding light on the successful case studies. Copyright © 2013 Elsevier Ltd. All rights reserved.

  6. Robust fault tolerant control based on sliding mode method for uncertain linear systems with quantization.

    PubMed

    Hao, Li-Ying; Yang, Guang-Hong

    2013-09-01

    This paper is concerned with the problem of robust fault-tolerant compensation control problem for uncertain linear systems subject to both state and input signal quantization. By incorporating novel matrix full-rank factorization technique with sliding surface design successfully, the total failure of certain actuators can be coped with, under a special actuator redundancy assumption. In order to compensate for quantization errors, an adjustment range of quantization sensitivity for a dynamic uniform quantizer is given through the flexible choices of design parameters. Comparing with the existing results, the derived inequality condition leads to the fault tolerance ability stronger and much wider scope of applicability. With a static adjustment policy of quantization sensitivity, an adaptive sliding mode controller is then designed to maintain the sliding mode, where the gain of the nonlinear unit vector term is updated automatically to compensate for the effects of actuator faults, quantization errors, exogenous disturbances and parameter uncertainties without the need for a fault detection and isolation (FDI) mechanism. Finally, the effectiveness of the proposed design method is illustrated via a model of a rocket fairing structural-acoustic. Copyright © 2013 ISA. Published by Elsevier Ltd. All rights reserved.

  7. A review of combined experimental and computational procedures for assessing biopolymer structure–process–property relationships

    PubMed Central

    Gronau, Greta; Krishnaji, Sreevidhya T.; Kinahan, Michelle E.; Giesa, Tristan; Wong, Joyce Y.; Kaplan, David L.; Buehler, Markus J.

    2013-01-01

    Tailored biomaterials with tunable functional properties are desirable for many applications ranging from drug delivery to regenerative medicine. To improve the predictability of biopolymer materials functionality, multiple design parameters need to be considered, along with appropriate models. In this article we review the state of the art of synthesis and processing related to the design of biopolymers, with an emphasis on the integration of bottom-up computational modeling in the design process. We consider three prominent examples of well-studied biopolymer materials – elastin, silk, and collagen – and assess their hierarchical structure, intriguing functional properties and categorize existing approaches to study these materials. We find that an integrated design approach in which both experiments and computational modeling are used has rarely been applied for these materials due to difficulties in relating insights gained on different length- and time-scales. In this context, multiscale engineering offers a powerful means to accelerate the biomaterials design process for the development of tailored materials that suit the needs posed by the various applications. The combined use of experimental and computational tools has a very broad applicability not only in the field of biopolymers, but can be exploited to tailor the properties of other polymers and composite materials in general. PMID:22938765

  8. A review of combined experimental and computational procedures for assessing biopolymer structure-process-property relationships.

    PubMed

    Gronau, Greta; Krishnaji, Sreevidhya T; Kinahan, Michelle E; Giesa, Tristan; Wong, Joyce Y; Kaplan, David L; Buehler, Markus J

    2012-11-01

    Tailored biomaterials with tunable functional properties are desirable for many applications ranging from drug delivery to regenerative medicine. To improve the predictability of biopolymer materials functionality, multiple design parameters need to be considered, along with appropriate models. In this article we review the state of the art of synthesis and processing related to the design of biopolymers, with an emphasis on the integration of bottom-up computational modeling in the design process. We consider three prominent examples of well-studied biopolymer materials - elastin, silk, and collagen - and assess their hierarchical structure, intriguing functional properties and categorize existing approaches to study these materials. We find that an integrated design approach in which both experiments and computational modeling are used has rarely been applied for these materials due to difficulties in relating insights gained on different length- and time-scales. In this context, multiscale engineering offers a powerful means to accelerate the biomaterials design process for the development of tailored materials that suit the needs posed by the various applications. The combined use of experimental and computational tools has a very broad applicability not only in the field of biopolymers, but can be exploited to tailor the properties of other polymers and composite materials in general. Copyright © 2012 Elsevier Ltd. All rights reserved.

  9. Self-(Un)rolling Biopolymer Microstructures: Rings, Tubules, and Helical Tubules from the Same Material.

    PubMed

    Ye, Chunhong; Nikolov, Svetoslav V; Calabrese, Rossella; Dindar, Amir; Alexeev, Alexander; Kippelen, Bernard; Kaplan, David L; Tsukruk, Vladimir V

    2015-07-13

    We have demonstrated the facile formation of reversible and fast self-rolling biopolymer microstructures from sandwiched active-passive, silk-on-silk materials. Both experimental and modeling results confirmed that the shape of individual sheets effectively controls biaxial stresses within these sheets, which can self-roll into distinct 3D structures including microscopic rings, tubules, and helical tubules. This is a unique example of tailoring self-rolled 3D geometries through shape design without changing the inner morphology of active bimorph biomaterials. In contrast to traditional organic-soluble synthetic materials, we utilized a biocompatible and biodegradable biopolymer that underwent a facile aqueous layer-by-layer (LbL) assembly process for the fabrication of 2D films. The resulting films can undergo reversible pH-triggered rolling/unrolling, with a variety of 3D structures forming from biopolymer structures that have identical morphology and composition. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  10. On the quantization of the massless Bateman system

    NASA Astrophysics Data System (ADS)

    Takahashi, K.

    2018-03-01

    The so-called Bateman system for the damped harmonic oscillator is reduced to a genuine dual dissipation system (DDS) by setting the mass to zero. We explore herein the condition under which the canonical quantization of the DDS is consistently performed. The roles of the observable and auxiliary coordinates are discriminated. The results show that the complete and orthogonal Fock space of states can be constructed on the stable vacuum if an anti-Hermite representation of the canonical Hamiltonian is adopted. The amplitude of the one-particle wavefunction is consistent with the classical solution. The fields can be quantized as bosonic or fermionic. For bosonic systems, the quantum fluctuation of the field is directly associated with the dissipation rate.

  11. Fill-in binary loop pulse-torque quantizer

    NASA Technical Reports Server (NTRS)

    Lory, C. B.

    1975-01-01

    Fill-in binary (FIB) loop provides constant heating of torque generator, an advantage of binary current switching. At the same time, it avoids mode-related dead zone and data delay of binary, an advantage of ternary quantization.

  12. The wavelet/scalar quantization compression standard for digital fingerprint images

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bradley, J.N.; Brislawn, C.M.

    1994-04-01

    A new digital image compression standard has been adopted by the US Federal Bureau of Investigation for use on digitized gray-scale fingerprint images. The algorithm is based on adaptive uniform scalar quantization of a discrete wavelet transform image decomposition and is referred to as the wavelet/scalar quantization standard. The standard produces archival quality images at compression ratios of around 20:1 and will allow the FBI to replace their current database of paper fingerprint cards with digital imagery.

  13. Supporting Dynamic Quantization for High-Dimensional Data Analytics.

    PubMed

    Guzun, Gheorghi; Canahuate, Guadalupe

    2017-05-01

    Similarity searches are at the heart of exploratory data analysis tasks. Distance metrics are typically used to characterize the similarity between data objects represented as feature vectors. However, when the dimensionality of the data increases and the number of features is large, traditional distance metrics fail to distinguish between the closest and furthest data points. Localized distance functions have been proposed as an alternative to traditional distance metrics. These functions only consider dimensions close to query to compute the distance/similarity. Furthermore, in order to enable interactive explorations of high-dimensional data, indexing support for ad-hoc queries is needed. In this work we set up to investigate whether bit-sliced indices can be used for exploratory analytics such as similarity searches and data clustering for high-dimensional big-data. We also propose a novel dynamic quantization called Query dependent Equi-Depth (QED) quantization and show its effectiveness on characterizing high-dimensional similarity. When applying QED we observe improvements in kNN classification accuracy over traditional distance functions. Gheorghi Guzun and Guadalupe Canahuate. 2017. Supporting Dynamic Quantization for High-Dimensional Data Analytics. In Proceedings of Ex-ploreDB'17, Chicago, IL, USA, May 14-19, 2017, 6 pages. https://doi.org/http://dx.doi.org/10.1145/3077331.3077336.

  14. Symplectic Quantization of a Reducible Theory

    NASA Astrophysics Data System (ADS)

    Barcelos-Neto, J.; Silva, M. B. D.

    We use the symplectic formalism to quantize the Abelian antisymmetric tensor gauge field. It is related to a reducible theory in the sense that all of its constraints are not independent. A procedure like ghost-of-ghost of the BFV method has to be used, but in terms of Lagrange multipliers.

  15. A Vegetal Biopolymer-Based Biostimulant Promoted Root Growth in Melon While Triggering Brassinosteroids and Stress-Related Compounds

    PubMed Central

    Lucini, Luigi; Rouphael, Youssef; Cardarelli, Mariateresa; Bonini, Paolo; Baffi, Claudio; Colla, Giuseppe

    2018-01-01

    Plant biostimulants are receiving great interest for boosting root growth during the first phenological stages of vegetable crops. The present study aimed at elucidating the morphological, physiological, and metabolomic changes occurring in greenhouse melon treated with the biopolymer-based biostimulant Quik-link, containing lateral root promoting peptides, and lignosulphonates. The vegetal-based biopolymer was applied at five rates (0, 0.06, 0.12, 0.24, or 0.48 mL plant-1) as substrate drench. The application of biopolymer-based biostimulant at 0.12 and 0.24 mL plant-1 enhanced dry weight of melon leaves and total biomass by 30.5 and 27.7%, respectively, compared to biopolymer applications at 0.06 mL plant-1 and untreated plants. The root dry biomass, total root length, and surface in biostimulant-treated plants were significantly higher at 0.24 mL plant-1 and to a lesser extent at 0.12 and 0.48 mL plant-1, in comparison to 0.06 mL plant-1 and untreated melon plants. A convoluted biochemical response to the biostimulant treatment was highlighted through UHPLC/QTOF-MS metabolomics, in which brassinosteroids and their interaction with other hormones appeared to play a pivotal role. Root metabolic profile was more markedly altered than leaves, following application of the biopolymer-based biostimulant. Brassinosteroids triggered in roots could have been involved in changes of root development observed after biostimulant application. These hormones, once transported to shoots, could have caused an hormonal imbalance. Indeed, the involvement of abscisic acid, cytokinins, and gibberellin related compounds was observed in leaves following root application of the biopolymer-based biostimulant. Nonetheless, the treatment triggered an accumulation of several metabolites involved in defense mechanisms against biotic and abiotic stresses, such as flavonoids, carotenoids, and glucosinolates, thus potentially improving resistance toward plant stresses. PMID:29692795

  16. Biosurfactant-biopolymer driven microbial enhanced oil recovery (MEOR) and its optimization by an ANN-GA hybrid technique.

    PubMed

    Dhanarajan, Gunaseelan; Rangarajan, Vivek; Bandi, Chandrakanth; Dixit, Abhivyakti; Das, Susmita; Ale, Kranthikiran; Sen, Ramkrishna

    2017-08-20

    A lipopeptide biosurfactant produced by marine Bacillus megaterium and a biopolymer produced by thermophilic Bacillus licheniformis were tested for their application potential in the enhanced oil recovery. The crude biosurfactant obtained after acid precipitation effectively reduced the surface tension of deionized water from 70.5 to 28.25mN/m and the interfacial tension between lube oil and water from 18.6 to 1.5mN/m at a concentration of 250mgL -1 . The biosurfactant exhibited a maximum emulsification activity (E 24 ) of 81.66% against lube oil. The lipopeptide micelles were stabilized by addition of Ca 2+ ions to the biosurfactant solution. The oil recovery efficiency of Ca 2+ conditioned lipopeptide solution from a sand-packed column was optimized by using artificial neural network (ANN) modelling coupled with genetic algorithm (GA) optimization. Three important parameters namely lipopeptide concentration, Ca 2+ concentration and solution pH were considered for optimization studies. In order to further improve the recovery efficiency, a water soluble biopolymer produced by Bacillus licheniformis was used as a flooding agent after biosurfactant incubation. Upon ANN-GA optimization, 45% tertiary oil recovery was achieved, when biopolymer at a concentration of 3gL -1 was used as a flooding agent. Oil recovery was only 29% at optimal conditions predicted by ANN-GA, when only water was used as flooding solution. The important characteristics of biopolymers such as its viscosity, pore plugging capabilities and bio-cementing ability have also been tested. Thus, as a result of biosurfactant incubation and biopolymer flooding under the optimal process conditions, a maximum oil recovery of 45% was achieved. Therefore, this study is novel, timely and interesting for it showed the combined influence of biosurfactant and biopolymer on solubilisation and mobilization of oil from the soil. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Landau quantization of Dirac fermions in graphene and its multilayers

    NASA Astrophysics Data System (ADS)

    Yin, Long-Jing; Bai, Ke-Ke; Wang, Wen-Xiao; Li, Si-Yu; Zhang, Yu; He, Lin

    2017-08-01

    When electrons are confined in a two-dimensional (2D) system, typical quantum-mechanical phenomena such as Landau quantization can be detected. Graphene systems, including the single atomic layer and few-layer stacked crystals, are ideal 2D materials for studying a variety of quantum-mechanical problems. In this article, we review the experimental progress in the unusual Landau quantized behaviors of Dirac fermions in monolayer and multilayer graphene by using scanning tunneling microscopy (STM) and scanning tunneling spectroscopy (STS). Through STS measurement of the strong magnetic fields, distinct Landau-level spectra and rich level-splitting phenomena are observed in different graphene layers. These unique properties provide an effective method for identifying the number of layers, as well as the stacking orders, and investigating the fundamentally physical phenomena of graphene. Moreover, in the presence of a strain and charged defects, the Landau quantization of graphene can be significantly modified, leading to unusual spectroscopic and electronic properties.

  18. More on quantum groups from the quantization point of view

    NASA Astrophysics Data System (ADS)

    Jurčo, Branislav

    1994-12-01

    Star products on the classical double group of a simple Lie group and on corresponding symplectic groupoids are given so that the quantum double and the “quantized tangent bundle” are obtained in the deformation description. “Complex” quantum groups and bicovariant quantum Lie algebras are discussed from this point of view. Further we discuss the quantization of the Poisson structure on the symmetric algebra S(g) leading to the quantized enveloping algebra U h (g) as an example of biquantization in the sense of Turaev. Description of U h (g) in terms of the generators of the bicovariant differential calculus on F(G q ) is very convenient for this purpose. Finaly we interpret in the deformation framework some well known properties of compact quantum groups as simple consequences of corresponding properties of classical compact Lie groups. An analogue of the classical Kirillov's universal character formula is given for the unitary irreducble representation in the compact case.

  19. Mass quantization of the Schwarzschild black hole

    NASA Astrophysics Data System (ADS)

    Vaz, Cenalo; Witten, Louis

    1999-07-01

    We examine the Wheeler-DeWitt equation for a static, eternal Schwarzschild black hole in Kuchař-Brown variables and obtain its energy eigenstates. Consistent solutions vanish in the exterior of the Kruskal manifold and are nonvanishing only in the interior. The system is reminiscent of a particle in a box. States of definite parity avoid the singular geometry by vanishing at the origin. These definite parity states admit a discrete energy spectrum, depending on one quantum number which determines the Arnowitt-Deser-Misner mass of the black hole according to a relation conjectured long ago by Bekenstein M~nMp. If attention is restricted only to these quantized energy states, a black hole is described not only by its mass but also by its parity. States of indefinite parity do not admit a quantized mass spectrum.

  20. Quantization of the nonlinear sigma model revisited

    NASA Astrophysics Data System (ADS)

    Nguyen, Timothy

    2016-08-01

    We revisit the subject of perturbatively quantizing the nonlinear sigma model in two dimensions from a rigorous, mathematical point of view. Our main contribution is to make precise the cohomological problem of eliminating potential anomalies that may arise when trying to preserve symmetries under quantization. The symmetries we consider are twofold: (i) diffeomorphism covariance for a general target manifold; (ii) a transitive group of isometries when the target manifold is a homogeneous space. We show that there are no anomalies in case (i) and that (ii) is also anomaly-free under additional assumptions on the target homogeneous space, in agreement with the work of Friedan. We carry out some explicit computations for the O(N)-model. Finally, we show how a suitable notion of the renormalization group establishes the Ricci flow as the one loop renormalization group flow of the nonlinear sigma model.

  1. Immobilization of Lipase Inhibitor on the Biopolymers from Agaricus bisporus Cell Walls

    PubMed Central

    2017-01-01

    Summary One of the methods for curing obesity is the inclusion of some substances with the antilipase activity in the diet and thus reducing the uptake of fat components from food. The aim of this research is to provide a stabilized form of lipase inhibitor by immobilization of enzyme on the biopolymers from Agaricus bisporus cell walls. The phenolic compounds extracted from the rapeseed were considered as the lipase inhibitor. The activity of the inhibitor was considerably reduced in the gastric juice, as well as at temperatures above 37 °C and during its storage, which determined the suitability of the inhibitor for stabilization on the matrix. The effectiveness of the phenolic compound stabilization was investigated by means of immobilization on the biopolymers from Agaricus bisporus cell wall matrix. The biopolymers used were β-glucan, chitin, melanin and proteins. A number of samples, which differed both in the content of the inhibitor (from 1 to 16%) and in the ratio of biopolymers in the matrix composition, was obtained. The conditions of immobilization (temperature, duration of the process) were also varied. The expediency of obtaining the sample with the inhibitor content of 12% and matrix containing 47.9% of glucan, 18.8% of chitin, 18.8% of melanin and 11.1% of proteins was shown. The best immobilization was carried out at 20–25 °C for 30 min. Thermal analysis and infrared spectroscopy data confirmed that immobilization of the lipase inhibitor on the matrix was due to the hydrogen bonds. The immobilized inhibitor had higher pH stability and higher thermal stability than the original one. The remaining activity of the immobilized inhibitor was higher than the original one after incubation in the gastric acid and bile. The immobilized inhibitor was characterized by a low loss of activity after 12 months of storage. PMID:29540987

  2. Biopolymers produced from gelatin and other sustainable resources using polyphenols

    USDA-ARS?s Scientific Manuscript database

    Several researchers have recently demonstrated the feasibility of producing biopolymers from the reaction of polyphenolics with gelatin in combination with other proteins (e.g. whey) or with carbohydrates (e.g. chitosan and pectin). These combinations would take advantage of the unique properties o...

  3. USING BIOPOLYMERS TO REMOVE HEAVY METALS FROM SOIL AND WATER

    EPA Science Inventory

    Chemical remediation of soil may involve the use of harsh chemicals that generate waste streams, which may adversely affect the soil's integrity and ability to support vegetation. This article reviews the potential use of benign reagents, such as biopolymers, to extract heavy me...

  4. On a canonical quantization of 3D Anti de Sitter pure gravity

    NASA Astrophysics Data System (ADS)

    Kim, Jihun; Porrati, Massimo

    2015-10-01

    We perform a canonical quantization of pure gravity on AdS 3 using as a technical tool its equivalence at the classical level with a Chern-Simons theory with gauge group SL(2,{R})× SL(2,{R}) . We first quantize the theory canonically on an asymptotically AdS space -which is topologically the real line times a Riemann surface with one connected boundary. Using the "constrain first" approach we reduce canonical quantization to quantization of orbits of the Virasoro group and Kähler quantization of Teichmüller space. After explicitly computing the Kähler form for the torus with one boundary component and after extending that result to higher genus, we recover known results, such as that wave functions of SL(2,{R}) Chern-Simons theory are conformal blocks. We find new restrictions on the Hilbert space of pure gravity by imposing invariance under large diffeomorphisms and normalizability of the wave function. The Hilbert space of pure gravity is shown to be the target space of Conformal Field Theories with continuous spectrum and a lower bound on operator dimensions. A projection defined by topology changing amplitudes in Euclidean gravity is proposed. It defines an invariant subspace that allows for a dual interpretation in terms of a Liouville CFT. Problems and features of the CFT dual are assessed and a new definition of the Hilbert space, exempt from those problems, is proposed in the case of highly-curved AdS 3.

  5. Synthesis and evaluation of alendronate-modified gelatin biopolymer as a novel osteotropic nanocarrier for gene therapy.

    PubMed

    Mekhail, George M; Kamel, Amany O; Awad, Gehanne As; Mortada, Nahed D; Rodrigo, Rowena L; Spagnuolo, Paul A; Wettig, Shawn D

    2016-09-01

    To synthesize an osteotropic alendronate functionalized gelatin (ALN-gelatin) biopolymer for nanoparticle preparation and targeted delivery of DNA to osteoblasts for gene therapy applications. Alendronate coupling to gelatin was confirmed using Fourier transform IR, (31)PNMR, x-ray diffraction (XRD) and differential scanning calorimetry. ALN-gelatin biopolymers prepared at various alendronate/gelatin ratios were utilized to prepare nanoparticles and were optimized in combination with DNA and gemini surfactant for transfecting both HEK-293 and MG-63 cell lines. Gelatin functionalization was confirmed using the above methods. Uniform nanoparticles were obtained from a nanoprecipitation technique. ALN-gelatin/gemini/DNA complexes exhibited higher transfection efficiency in MG-63 osteosarcoma cell line compared with the positive control. ALN-gelatin is a promising biopolymer for bone targeting of either small molecules or gene therapy applications.

  6. Entropy-aware projected Landweber reconstruction for quantized block compressive sensing of aerial imagery

    NASA Astrophysics Data System (ADS)

    Liu, Hao; Li, Kangda; Wang, Bing; Tang, Hainie; Gong, Xiaohui

    2017-01-01

    A quantized block compressive sensing (QBCS) framework, which incorporates the universal measurement, quantization/inverse quantization, entropy coder/decoder, and iterative projected Landweber reconstruction, is summarized. Under the QBCS framework, this paper presents an improved reconstruction algorithm for aerial imagery, QBCS, with entropy-aware projected Landweber (QBCS-EPL), which leverages the full-image sparse transform without Wiener filter and an entropy-aware thresholding model for wavelet-domain image denoising. Through analyzing the functional relation between the soft-thresholding factors and entropy-based bitrates for different quantization methods, the proposed model can effectively remove wavelet-domain noise of bivariate shrinkage and achieve better image reconstruction quality. For the overall performance of QBCS reconstruction, experimental results demonstrate that the proposed QBCS-EPL algorithm significantly outperforms several existing algorithms. With the experiment-driven methodology, the QBCS-EPL algorithm can obtain better reconstruction quality at a relatively moderate computational cost, which makes it more desirable for aerial imagery applications.

  7. Reformulation of the covering and quantizer problems as ground states of interacting particles.

    PubMed

    Torquato, S

    2010-11-01

    It is known that the sphere-packing problem and the number-variance problem (closely related to an optimization problem in number theory) can be posed as energy minimizations associated with an infinite number of point particles in d-dimensional Euclidean space R(d) interacting via certain repulsive pair potentials. We reformulate the covering and quantizer problems as the determination of the ground states of interacting particles in R(d) that generally involve single-body, two-body, three-body, and higher-body interactions. This is done by linking the covering and quantizer problems to certain optimization problems involving the "void" nearest-neighbor functions that arise in the theory of random media and statistical mechanics. These reformulations, which again exemplify the deep interplay between geometry and physics, allow one now to employ theoretical and numerical optimization techniques to analyze and solve these energy minimization problems. The covering and quantizer problems have relevance in numerous applications, including wireless communication network layouts, the search of high-dimensional data parameter spaces, stereotactic radiation therapy, data compression, digital communications, meshing of space for numerical analysis, and coding and cryptography, among other examples. In the first three space dimensions, the best known solutions of the sphere-packing and number-variance problems (or their "dual" solutions) are directly related to those of the covering and quantizer problems, but such relationships may or may not exist for d≥4 , depending on the peculiarities of the dimensions involved. Our reformulation sheds light on the reasons for these similarities and differences. We also show that disordered saturated sphere packings provide relatively thin (economical) coverings and may yield thinner coverings than the best known lattice coverings in sufficiently large dimensions. In the case of the quantizer problem, we derive improved upper bounds

  8. Reformulation of the covering and quantizer problems as ground states of interacting particles

    NASA Astrophysics Data System (ADS)

    Torquato, S.

    2010-11-01

    It is known that the sphere-packing problem and the number-variance problem (closely related to an optimization problem in number theory) can be posed as energy minimizations associated with an infinite number of point particles in d -dimensional Euclidean space Rd interacting via certain repulsive pair potentials. We reformulate the covering and quantizer problems as the determination of the ground states of interacting particles in Rd that generally involve single-body, two-body, three-body, and higher-body interactions. This is done by linking the covering and quantizer problems to certain optimization problems involving the “void” nearest-neighbor functions that arise in the theory of random media and statistical mechanics. These reformulations, which again exemplify the deep interplay between geometry and physics, allow one now to employ theoretical and numerical optimization techniques to analyze and solve these energy minimization problems. The covering and quantizer problems have relevance in numerous applications, including wireless communication network layouts, the search of high-dimensional data parameter spaces, stereotactic radiation therapy, data compression, digital communications, meshing of space for numerical analysis, and coding and cryptography, among other examples. In the first three space dimensions, the best known solutions of the sphere-packing and number-variance problems (or their “dual” solutions) are directly related to those of the covering and quantizer problems, but such relationships may or may not exist for d≥4 , depending on the peculiarities of the dimensions involved. Our reformulation sheds light on the reasons for these similarities and differences. We also show that disordered saturated sphere packings provide relatively thin (economical) coverings and may yield thinner coverings than the best known lattice coverings in sufficiently large dimensions. In the case of the quantizer problem, we derive improved upper

  9. Deformation quantizations with separation of variables on a Kähler manifold

    NASA Astrophysics Data System (ADS)

    Karabegov, Alexander V.

    1996-10-01

    We give a simple geometric description of all formal differentiable deformation quantizations on a Kähler manifold M such that for each open subset U⊂ M ⋆-multiplication from the left by a holomorphic function and from the right by an antiholomorphic function on U coincides with the pointwise multiplication by these functions. We show that these quantizations are in 1-1 correspondence with the formal deformations of the original Kähler metrics on M.

  10. Combinatorial quantization of the Hamiltonian Chern-Simons theory II

    NASA Astrophysics Data System (ADS)

    Alekseev, Anton Yu.; Grosse, Harald; Schomerus, Volker

    1996-01-01

    This paper further develops the combinatorial approach to quantization of the Hamiltonian Chern Simons theory advertised in [1]. Using the theory of quantum Wilson lines, we show how the Verlinde algebra appears within the context of quantum group gauge theory. This allows to discuss flatness of quantum connections so that we can give a mathematically rigorous definition of the algebra of observables A CS of the Chern Simons model. It is a *-algebra of “functions on the quantum moduli space of flat connections” and comes equipped with a positive functional ω (“integration”). We prove that this data does not depend on the particular choices which have been made in the construction. Following ideas of Fock and Rosly [2], the algebra A CS provides a deformation quantization of the algebra of functions on the moduli space along the natural Poisson bracket induced by the Chern Simons action. We evaluate a volume of the quantized moduli space and prove that it coincides with the Verlinde number. This answer is also interpreted as a partition partition function of the lattice Yang-Mills theory corresponding to a quantum gauge group.

  11. Biopolymers as an Alternative to Petroleum-Based Polymers for Soil Modification; ESTCP ER-0920: Treatability Studies

    DTIC Science & Technology

    2012-08-01

    carboxylic, amine, hydroxyl). Molasses produced more carboxylic acid groups than the corn syrup -based material and was composed of high ...molecular weight EPS units (as high as 800 KDa). Corn syrup -derived biopolymer, on the other hand, showed a greater number of small molecular weight...biopolymer by R. tropici: corn syrup , maltose, sorghum, and molasses. The maltose, being a very expensive carbon source, has been replaced by the sorghum

  12. Biopolymers as an Alternative to Petroleum-Based Polymers for Soil Modification, ESTCP ER-0920: Treatability Studies

    DTIC Science & Technology

    2012-08-01

    carboxylic, amine, hydroxyl). Molasses produced more carboxylic acid groups than the corn syrup -based material and was composed of high ...molecular weight EPS units (as high as 800 KDa). Corn syrup -derived biopolymer, on the other hand, showed a greater number of small molecular weight...biopolymer by R. tropici: corn syrup , maltose, sorghum, and molasses. The maltose, being a very expensive carbon source, has been replaced by the sorghum

  13. Scalets, wavelets and (complex) turning point quantization

    NASA Astrophysics Data System (ADS)

    Handy, C. R.; Brooks, H. A.

    2001-05-01

    Despite the many successes of wavelet analysis in image and signal processing, the incorporation of continuous wavelet transform theory within quantum mechanics has lacked a compelling, first principles, motivating analytical framework, until now. For arbitrary one-dimensional rational fraction Hamiltonians, we develop a simple, unified formalism, which clearly underscores the complementary, and mutually interdependent, role played by moment quantization theory (i.e. via scalets, as defined herein) and wavelets. This analysis involves no approximation of the Hamiltonian within the (equivalent) wavelet space, and emphasizes the importance of (complex) multiple turning point contributions in the quantization process. We apply the method to three illustrative examples. These include the (double-well) quartic anharmonic oscillator potential problem, V(x) = Z2x2 + gx4, the quartic potential, V(x) = x4, and the very interesting and significant non-Hermitian potential V(x) = -(ix)3, recently studied by Bender and Boettcher.

  14. Natural biopolymers : novel templates for the synthesis of nanostructures.

    Treesearch

    Sonal Padalkar; J.R. Capadona; S.J. Rowan; C. Weder; Yu-Ho Won; Lia A. Stanciu; Robert J. Moon

    2010-01-01

    Biological systems such as proteins, viruses, and DNA have been most often reported to be used as templates for the synthesis of functional nanomaterials, but the properties of widely available biopolymers, such as cellulose, have been much less exploited for this purpose. Here, we report for the first time that cellulose nanocrystals (CNC) have the capacity to assist...

  15. Production of a Biopolymer at Reactor Scale: A Laboratory Experience

    ERIC Educational Resources Information Center

    Genc, Rukan; Rodriguez-Couto, Susana

    2011-01-01

    Undergraduate students of biotechnology became familiar with several aspects of bioreactor operation via the production of xanthan gum, an industrially relevant biopolymer, by "Xanthomonas campestris" bacteria. The xanthan gum was extracted from the fermentation broth and the yield coefficient and productivity were calculated. (Contains 2 figures.)

  16. Financial costs of large carnivore translocations--accounting for conservation.

    PubMed

    Weise, Florian J; Stratford, Ken J; van Vuuren, Rudolf J

    2014-01-01

    Human-carnivore conflict continues to present a major conservation challenge around the world. Translocation of large carnivores is widely implemented but remains strongly debated, in part because of a lack of cost transparency. We report detailed translocation costs for three large carnivore species in Namibia and across different translocation scenarios. We consider the effect of various parameters and factors on costs and translocation success. Total translocation cost for 30 individuals in 22 events was $80,681 (US Dollars). Median translocation cost per individual was $2,393, and $2,669 per event. Median cost per cheetah was $2,760 (n = 23), and $2,108 per leopard (n = 6). One hyaena was translocated at a cost of $1,672. Tracking technology was the single biggest cost element (56%), followed by captive holding and feeding. Soft releases, prolonged captivity and orphaned individuals also increased case-specific costs. A substantial proportion (65.4%) of the total translocation cost was successfully recovered from public interest groups. Less than half the translocations were confirmed successes (44.4%, 3 unknown) with a strong species bias. Four leopards (66.7%) were successfully translocated but only eight of the 20 cheetahs (40.0%) with known outcome met these strict criteria. None of the five habituated cheetahs was translocated successfully, nor was the hyaena. We introduce the concept of Individual Conservation Cost (ICC) and define it as the cost of one successfully translocated individual adjusted by costs of unsuccessful events of the same species. The median ICC for cheetah was $6,898 and $3,140 for leopard. Translocations are costly, but we demonstrate that they are not inherently more expensive than other strategies currently employed in non-lethal carnivore conflict management. We conclude that translocation should be one available option for conserving large carnivores, but needs to be critically evaluated on a case-by-case basis.

  17. Biological Effects of Spirulina (Arthrospira) Biopolymers and Biomass in the Development of Nanostructured Scaffolds

    PubMed Central

    de Morais, Michele Greque; Vaz, Bruna da Silva; de Morais, Etiele Greque; Costa, Jorge Alberto Vieira

    2014-01-01

    Spirulina is produced from pure cultures of the photosynthetic prokaryotic cyanobacteria Arthrospira. For many years research centers throughout the world have studied its application in various scientific fields, especially in foods and medicine. The biomass produced from Spirulina cultivation contains a variety of biocompounds, including biopeptides, biopolymers, carbohydrates, essential fatty acids, minerals, oligoelements, and sterols. Some of these compounds are bioactive and have anti-inflammatory, antibacterial, antioxidant, and antifungal properties. These compounds can be used in tissue engineering, the interdisciplinary field that combines techniques from cell science, engineering, and materials science and which has grown in importance over the past few decades. Spirulina biomass can be used to produce polyhydroxyalkanoates (PHAs), biopolymers that can substitute synthetic polymers in the construction of engineered extracellular matrices (scaffolds) for use in tissue cultures or bioactive molecule construction. This review describes the development of nanostructured scaffolds based on biopolymers extracted from microalgae and biomass from Spirulina production. These scaffolds have the potential to encourage cell growth while reducing the risk of organ or tissue rejection. PMID:25157367

  18. Necessary conditions for the optimality of variable rate residual vector quantizers

    NASA Technical Reports Server (NTRS)

    Kossentini, Faouzi; Smith, Mark J. T.; Barnes, Christopher F.

    1993-01-01

    Residual vector quantization (RVQ), or multistage VQ, as it is also called, has recently been shown to be a competitive technique for data compression. The competitive performance of RVQ reported in results from the joint optimization of variable rate encoding and RVQ direct-sum code books. In this paper, necessary conditions for the optimality of variable rate RVQ's are derived, and an iterative descent algorithm based on a Lagrangian formulation is introduced for designing RVQ's having minimum average distortion subject to an entropy constraint. Simulation results for these entropy-constrained RVQ's (EC-RVQ's) are presented for memory less Gaussian, Laplacian, and uniform sources. A Gauss-Markov source is also considered. The performance is superior to that of entropy-constrained scalar quantizers (EC-SQ's) and practical entropy-constrained vector quantizers (EC-VQ's), and is competitive with that of some of the best source coding techniques that have appeared in the literature.

  19. Attachment of a hydrophobically modified biopolymer at the oil-water interface in the treatment of oil spills.

    PubMed

    Venkataraman, Pradeep; Tang, Jingjian; Frenkel, Etham; McPherson, Gary L; He, Jibao; Raghavan, Srinivasa R; Kolesnichenko, Vladimir; Bose, Arijit; John, Vijay T

    2013-05-01

    The stability of crude oil droplets formed by adding chemical dispersants can be considerably enhanced by the use of the biopolymer, hydrophobically modified chitosan. Turbidimetric analyses show that emulsions of crude oil in saline water prepared using a combination of the biopolymer and the well-studied chemical dispersant (Corexit 9500A) remain stable for extended periods in comparison to emulsions stabilized by the dispersant alone. We hypothesize that the hydrophobic residues from the polymer preferentially anchor in the oil droplets, thereby forming a layer of the polymer around the droplets. The enhanced stability of the droplets is due to the polymer layer providing an increase in electrostatic and steric repulsions and thereby a large barrier to droplet coalescence. Our results show that the addition of hydrophobically modified chitosan following the application of chemical dispersant to an oil spill can potentially reduce the use of chemical dispersants. Increasing the molecular weight of the biopolymer changes the rheological properties of the oil-in-water emulsion to that of a weak gel. The ability of the biopolymer to tether the oil droplets in a gel-like matrix has potential applications in the immobilization of surface oil spills for enhanced removal.

  20. Subband directional vector quantization in radiological image compression

    NASA Astrophysics Data System (ADS)

    Akrout, Nabil M.; Diab, Chaouki; Prost, Remy; Goutte, Robert; Amiel, Michel

    1992-05-01

    The aim of this paper is to propose a new scheme for image compression. The method is very efficient for images which have directional edges such as the tree-like structure of the coronary vessels in digital angiograms. This method involves two steps. First, the original image is decomposed at different resolution levels using a pyramidal subband decomposition scheme. For decomposition/reconstruction of the image, free of aliasing and boundary errors, we use an ideal band-pass filter bank implemented in the Discrete Cosine Transform domain (DCT). Second, the high-frequency subbands are vector quantized using a multiresolution codebook with vertical and horizontal codewords which take into account the edge orientation of each subband. The proposed method reduces the blocking effect encountered at low bit rates in conventional vector quantization.

  1. TBA-like integral equations from quantized mirror curves

    NASA Astrophysics Data System (ADS)

    Okuyama, Kazumi; Zakany, Szabolcs

    2016-03-01

    Quantizing the mirror curve of certain toric Calabi-Yau (CY) three-folds leads to a family of trace class operators. The resolvent function of these operators is known to encode topological data of the CY. In this paper, we show that in certain cases, this resolvent function satisfies a system of non-linear integral equations whose structure is very similar to the Thermodynamic Bethe Ansatz (TBA) systems. This can be used to compute spectral traces, both exactly and as a semiclassical expansion. As a main example, we consider the system related to the quantized mirror curve of local P2. According to a recent proposal, the traces of this operator are determined by the refined BPS indices of the underlying CY. We use our non-linear integral equations to test that proposal.

  2. On two mathematical problems of canonical quantization. IV

    NASA Astrophysics Data System (ADS)

    Kirillov, A. I.

    1992-11-01

    A method for solving the problem of reconstructing a measure beginning with its logarithmic derivative is presented. The method completes that of solving the stochastic differential equation via Dirichlet forms proposed by S. Albeverio and M. Rockner. As a result one obtains the mathematical apparatus for the stochastic quantization. The apparatus is applied to prove the existence of the Feynman-Kac measure of the sine-Gordon and λφ2n/(1 + K2φ2n)-models. A synthesis of both mathematical problems of canonical quantization is obtained in the form of a second-order martingale problem for vacuum noise. It is shown that in stochastic mechanics the martingale problem is an analog of Newton's second law and enables us to find the Nelson's stochastic trajectories without determining the wave functions.

  3. Prior-Based Quantization Bin Matching for Cloud Storage of JPEG Images.

    PubMed

    Liu, Xianming; Cheung, Gene; Lin, Chia-Wen; Zhao, Debin; Gao, Wen

    2018-07-01

    Millions of user-generated images are uploaded to social media sites like Facebook daily, which translate to a large storage cost. However, there exists an asymmetry in upload and download data: only a fraction of the uploaded images are subsequently retrieved for viewing. In this paper, we propose a cloud storage system that reduces the storage cost of all uploaded JPEG photos, at the expense of a controlled increase in computation mainly during download of requested image subset. Specifically, the system first selectively re-encodes code blocks of uploaded JPEG images using coarser quantization parameters for smaller storage sizes. Then during download, the system exploits known signal priors-sparsity prior and graph-signal smoothness prior-for reverse mapping to recover original fine quantization bin indices, with either deterministic guarantee (lossless mode) or statistical guarantee (near-lossless mode). For fast reverse mapping, we use small dictionaries and sparse graphs that are tailored for specific clusters of similar blocks, which are classified via tree-structured vector quantizer. During image upload, cluster indices identifying the appropriate dictionaries and graphs for the re-quantized blocks are encoded as side information using a differential distributed source coding scheme to facilitate reverse mapping during image download. Experimental results show that our system can reap significant storage savings (up to 12.05%) at roughly the same image PSNR (within 0.18 dB).

  4. Vector quantizer designs for joint compression and terrain categorization of multispectral imagery

    NASA Technical Reports Server (NTRS)

    Gorman, John D.; Lyons, Daniel F.

    1994-01-01

    Two vector quantizer designs for compression of multispectral imagery and their impact on terrain categorization performance are evaluated. The mean-squared error (MSE) and classification performance of the two quantizers are compared, and it is shown that a simple two-stage design minimizing MSE subject to a constraint on classification performance has a significantly better classification performance than a standard MSE-based tree-structured vector quantizer followed by maximum likelihood classification. This improvement in classification performance is obtained with minimal loss in MSE performance. The results show that it is advantageous to tailor compression algorithm designs to the required data exploitation tasks. Applications of joint compression/classification include compression for the archival or transmission of Landsat imagery that is later used for land utility surveys and/or radiometric analysis.

  5. On Fock-space representations of quantized enveloping algebras related to noncommutative differential geometry

    NASA Astrophysics Data System (ADS)

    Jurčo, B.; Schlieker, M.

    1995-07-01

    In this paper explicitly natural (from the geometrical point of view) Fock-space representations (contragradient Verma modules) of the quantized enveloping algebras are constructed. In order to do so, one starts from the Gauss decomposition of the quantum group and introduces the differential operators on the corresponding q-deformed flag manifold (assumed as a left comodule for the quantum group) by a projection to it of the right action of the quantized enveloping algebra on the quantum group. Finally, the representatives of the elements of the quantized enveloping algebra corresponding to the left-invariant vector fields on the quantum group are expressed as first-order differential operators on the q-deformed flag manifold.

  6. Quantized phase coding and connected region labeling for absolute phase retrieval.

    PubMed

    Chen, Xiangcheng; Wang, Yuwei; Wang, Yajun; Ma, Mengchao; Zeng, Chunnian

    2016-12-12

    This paper proposes an absolute phase retrieval method for complex object measurement based on quantized phase-coding and connected region labeling. A specific code sequence is embedded into quantized phase of three coded fringes. Connected regions of different codes are labeled and assigned with 3-digit-codes combining the current period and its neighbors. Wrapped phase, more than 36 periods, can be restored with reference to the code sequence. Experimental results verify the capability of the proposed method to measure multiple isolated objects.

  7. Vector Quantization Algorithm Based on Associative Memories

    NASA Astrophysics Data System (ADS)

    Guzmán, Enrique; Pogrebnyak, Oleksiy; Yáñez, Cornelio; Manrique, Pablo

    This paper presents a vector quantization algorithm for image compression based on extended associative memories. The proposed algorithm is divided in two stages. First, an associative network is generated applying the learning phase of the extended associative memories between a codebook generated by the LBG algorithm and a training set. This associative network is named EAM-codebook and represents a new codebook which is used in the next stage. The EAM-codebook establishes a relation between training set and the LBG codebook. Second, the vector quantization process is performed by means of the recalling stage of EAM using as associative memory the EAM-codebook. This process generates a set of the class indices to which each input vector belongs. With respect to the LBG algorithm, the main advantages offered by the proposed algorithm is high processing speed and low demand of resources (system memory); results of image compression and quality are presented.

  8. q-Derivatives, quantization methods and q-algebras

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Twarock, Reidun

    1998-12-15

    Using the example of Borel quantization on S{sup 1}, we discuss the relation between quantization methods and q-algebras. In particular, it is shown that a q-deformation of the Witt algebra with generators labeled by Z is realized by q-difference operators. This leads to a discrete quantum mechanics. Because of Z, the discretization is equidistant. As an approach to a non-equidistant discretization of quantum mechanics one can change the Witt algebra using not the number field Z as labels but a quadratic extension of Z characterized by an irrational number {tau}. This extension is denoted as quasi-crystal Lie algebra, because thismore » is a relation to one-dimensional quasicrystals. The q-deformation of this quasicrystal Lie algebra is discussed. It is pointed out that quasicrystal Lie algebras can be considered also as a 'deformed' Witt algebra with a 'deformation' of the labeling number field. Their application to the theory is discussed.« less

  9. Quantized circular photogalvanic effect in Weyl semimetals

    NASA Astrophysics Data System (ADS)

    de Juan, Fernando; Grushin, Adolfo G.; Morimoto, Takahiro; Moore, Joel E.

    The circular photogalvanic effect (CPGE) is the part of a photocurrent that switches depending on the sense of circular polarization of the incident light. It has been consistently observed in systems without inversion symmetry and depends on non-universal material details. We find that in a class of Weyl semimetals (e.g. SrSi2) and three-dimensional Rashba materials (e.g. doped Te) without inversion and mirror symmetries, the CPGE trace is effectively Quantized in terms of the combination of fundamental constants e3/h2 cɛ0 with no material-dependent parameters. This is so because the CPGE directly measures the topological charge of Weyl points near the Fermi surface, and non-quantized corrections from disorder and additional bands can be small over a significant range of incident frequencies. Moreover, the magnitude of the CPGE induced by a Weyl node is relatively large, which enables the direct detection of the monopole charge with current techniques.

  10. Quantized circular photogalvanic effect in Weyl semimetals

    NASA Astrophysics Data System (ADS)

    de Juan, Fernando; Grushin, Adolfo G.; Morimoto, Takahiro; Moore, Joel E.

    2017-07-01

    The circular photogalvanic effect (CPGE) is the part of a photocurrent that switches depending on the sense of circular polarization of the incident light. It has been consistently observed in systems without inversion symmetry and depends on non-universal material details. Here we find that in a class of Weyl semimetals (for example, SrSi2) and three-dimensional Rashba materials (for example, doped Te) without inversion and mirror symmetries, the injection contribution to the CPGE trace is effectively quantized in terms of the fundamental constants e, h, c and with no material-dependent parameters. This is so because the CPGE directly measures the topological charge of Weyl points, and non-quantized corrections from disorder and additional bands can be small over a significant range of incident frequencies. Moreover, the magnitude of the CPGE induced by a Weyl node is relatively large, which enables the direct detection of the monopole charge with current techniques.

  11. Biopolymer-based membranes associated with osteogenic growth peptide for guided bone regeneration.

    PubMed

    Saska, Sybele; Pigossi, Suzane C; Oliveira, Guilherme J P L; Teixeira, Lucas N; Capela, Marisa V; Gonçalves, Andreia; de Oliveira, Paulo T; Messaddeq, Younès; Ribeiro, Sidney J L; Gaspar, Ana Maria Minarelli; Marchetto, Reinaldo

    2018-03-14

    Barrier membranes for guided bone regeneration (GBR) mainly promote mechanical maintenance of bone defect space and induce osteopromotion. Additionally, biopolymer-based membranes may provide greater bioactivity and biocompatibility due to their similarity to extracellular matrix (ECM). In this study, biopolymers-based membranes from bacterial cellulose (BC) and collagen (COL) associated with osteogenic growth peptide (OGP(10-14)) were evaluated to determine in vitro osteoinductive potential in early osteogenesis; moreover, histological study was performed to evaluate the BC-COL OGP(10-14) membranes on bone healing after GBR in noncritical defects in rat femur. The results showed that the BC-COL and BC-COL OGP(10-14) membranes promoted cell proliferation and alkaline phosphatase activity in osteoblastic cell cultures. However, ECM mineralization was similar between cultures grown on BC OGP(10-14) and BC-COL OGP(10-14) membranes. In vivo results showed that all the membranes tested, including the peptide-free BC membrane, promoted better bone regeneration than control group. Furthermore, the BC-COL OGP(10-14) membranes induced higher radiographic density in the repaired bone than the other groups at 1, 4 and 16 weeks. Histomorphometric analyses revealed that the BC-COL OGP(10-14) induced higher percentage of bone tissue in the repaired area at 2 and 4 weeks than others membranes. In general, these biopolymer-based membranes might be potential candidates for bone regeneration applications.

  12. Blocking Gastric Lipase Adsorption and Displacement Processes with Viscoelastic Biopolymer Adsorption Layers.

    PubMed

    Scheuble, Nathalie; Lussi, Micha; Geue, Thomas; Carrière, Frédéric; Fischer, Peter

    2016-10-10

    Delayed fat digestion might help to fight obesity. Fat digestion begins in the stomach by adsorption of gastric lipases to oil/water interfaces. In this study we show how biopolymer covered interfaces can act as a physical barrier for recombinant dog gastric lipase (rDGL) adsorption and thus gastric lipolysis. We used β-lactoglobulin (β-lg) and thermosensitive methylated nanocrystalline cellulose (metNCC) as model biopolymers to investigate the role of interfacial fluid dynamics and morphology for interfacial displacement processes by rDGL and polysorbate 20 (P20) under gastric conditions. Moreover, the influence of the combination of the flexible β-lg and the elastic metNCC was studied. The interfaces were investigated combining interfacial techniques, such as pendant drop, interfacial shear and dilatational rheology, and neutron reflectometry. Displacement of biopolymer layers depended mainly on the fluid dynamics and thickness of the layers, both of which were drastically increased by the thermal induced gelation of metNCC at body temperature. Soft, thin β-lg interfaces were almost fully displaced from the interface, whereas the composite β-lg-metNCC layer thermogelled to a thick interfacial layer incorporating β-lg as filler material and therefore resisted higher shear forces than a pure metNCC layer. Hence, with metNCC alone lipolysis by rDGL was inhibited, whereas the layer performance could be increased by the combination with β-lg.

  13. Quantization with maximally degenerate Poisson brackets: the harmonic oscillator!

    NASA Astrophysics Data System (ADS)

    Nutku, Yavuz

    2003-07-01

    Nambu's construction of multi-linear brackets for super-integrable systems can be thought of as degenerate Poisson brackets with a maximal set of Casimirs in their kernel. By introducing privileged coordinates in phase space these degenerate Poisson brackets are brought to the form of Heisenberg's equations. We propose a definition for constructing quantum operators for classical functions, which enables us to turn the maximally degenerate Poisson brackets into operators. They pose a set of eigenvalue problems for a new state vector. The requirement of the single-valuedness of this eigenfunction leads to quantization. The example of the harmonic oscillator is used to illustrate this general procedure for quantizing a class of maximally super-integrable systems.

  14. Floating-point system quantization errors in digital control systems

    NASA Technical Reports Server (NTRS)

    Phillips, C. L.

    1973-01-01

    The results are reported of research into the effects on system operation of signal quantization in a digital control system. The investigation considered digital controllers (filters) operating in floating-point arithmetic in either open-loop or closed-loop systems. An error analysis technique is developed, and is implemented by a digital computer program that is based on a digital simulation of the system. As an output the program gives the programing form required for minimum system quantization errors (either maximum of rms errors), and the maximum and rms errors that appear in the system output for a given bit configuration. The program can be integrated into existing digital simulations of a system.

  15. Biopolymers production with carbon source from the wastes of a beer brewery industry

    NASA Astrophysics Data System (ADS)

    Wong, Phoeby Ai Ling

    The main purpose of this study was to assess the potential and feasibility of malt wastes, and other food wastes, such as soy wastes, ice-cream wastes, confectionery wastes, vinegar wastes, milk waste and sesame oil, in the induction of biosynthesis of PHA, in the cellular assembly of novel PHA with improved physical and chemical properties, and in the reduction of the cost of PHA production. In the first part of the experiments, a specific culture of Alcaligenes latus DSM 1124 was selected to ferment several types of food wastes as carbon sources into biopolymers. In addition, the biopolymer production, by way of using malt waste, of microorganisms from municipal activated sludge was also investigated. In the second part, the experiments focused on the synthesis of biopolymer with a higher molecular mass via the bacterial strain, which was selected and isolated from sesame oil, identified as Staphylococcus epidermidis . Molecular weight and molecular weight distribution of PHB were studied by GPC. Molecular weight of PHB produced from various types of food wastes by Alcaligenes latus was higher than using synthetic sucrose medium as nutrient, however, it resulted in the reverse by Staphylococcus epidermidis. Thermal properties of biopolymers were studied by DSC and TG. Using malt wastes as nutrients by Alcaligenes latus gave a higher melting temperature. Using sucrose, confectionery and sesame oil as nutrients by Staphylococcus epidermidis gave higher melting temperature. Optimization was carried out for the recovery of microbial PHB from Alcaligenes latus. Results showed that molecular weight can be controlled by changing the hypochlorite concentration, the ratio of chloroform to hypochlorite solution and the extraction time. In addition, the determination of PHB content by thermogravimetric analysis method with wet cell was the first report in our study. (Abstract shortened by UMI.)

  16. An analogue of Weyl’s law for quantized irreducible generalized flag manifolds

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Matassa, Marco, E-mail: marco.matassa@gmail.com, E-mail: mmatassa@math.uio.no

    2015-09-15

    We prove an analogue of Weyl’s law for quantized irreducible generalized flag manifolds. This is formulated in terms of a zeta function which, similarly to the classical setting, satisfies the following two properties: as a functional on the quantized algebra it is proportional to the Haar state and its first singularity coincides with the classical dimension. The relevant formulas are given for the more general case of compact quantum groups.

  17. Toward a perceptual image quality assessment of color quantized images

    NASA Astrophysics Data System (ADS)

    Frackiewicz, Mariusz; Palus, Henryk

    2018-04-01

    Color image quantization is an important operation in the field of color image processing. In this paper, we consider new perceptual image quality metrics for assessment of quantized images. These types of metrics, e.g. DSCSI, MDSIs, MDSIm and HPSI achieve the highest correlation coefficients with MOS during tests on the six publicly available image databases. Research was limited to images distorted by two types of compression: JPG and JPG2K. Statistical analysis of correlation coefficients based on the Friedman test and post-hoc procedures showed that the differences between the four new perceptual metrics are not statistically significant.

  18. A Heisenberg Algebra Bundle of a Vector Field in Three-Space and its Weyl Quantization

    NASA Astrophysics Data System (ADS)

    Binz, Ernst; Pods, Sonja

    2006-01-01

    In these notes we associate a natural Heisenberg group bundle Ha with a singularity free smooth vector field X = (id,a) on a submanifold M in a Euclidean three-space. This bundle yields naturally an infinite dimensional Heisenberg group HX∞. A representation of the C*-group algebra of HX∞ is a quantization. It causes a natural Weyl-deformation quantization of X. The influence of the topological structure of M on this quantization is encoded in the Chern class of a canonical complex line bundle inside Ha.

  19. New vertices and canonical quantization

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Alexandrov, Sergei

    2010-07-15

    We present two results on the recently proposed new spin foam models. First, we show how a (slightly modified) restriction on representations in the Engle-Pereira-Rovelli-Livine model leads to the appearance of the Ashtekar-Barbero connection, thus bringing this model even closer to loop quantum gravity. Second, we however argue that the quantization procedure used to derive the new models is inconsistent since it relies on the symplectic structure of the unconstrained BF theory.

  20. Centromere structure and function analysis in wheat-rye translocation lines.

    PubMed

    Wang, Jing; Liu, Yalin; Su, Handong; Guo, Xianrui; Han, Fangpu

    2017-07-01

    1RS.1BL translocations are centric translocations formed by misdivision and have been used extensively in wheat breeding. However, the role that the centromere plays in the formation of 1RS.1BL translocations is still unclear. Fluorescence in situ hybridization (FISH) was applied to detect the fine structures of the centromeres in 130 1RS.1BL translocation cultivars. Immuno-FISH, chromatin immunoprecipitation (ChIP)-qPCR and RT-PCR were used to investigate the functions of the hybrid centromeres in 1RS.1BL translocations. New 1R translocations with different centromere structures were created by misdivision and pollen irradiation to elucidate the role that the centromere plays in the formation of 1RS.1BL translocations. We found that all of the 1RS.1BL translocations detected contained hybrid centromeres and that wheat-derived CENH3 bound to both the wheat and rye centromeres in the 1RS.1BL translocation chromosomes. Moreover, a rye centromere-specific retrotransposon was actively transcribed in 1RS.1BL translocations. The frequencies of new 1RS hybrid centromere translocations and group-1 chromosome translocations were higher during 1R misdivision. Our study demonstrates the hybrid nature of the centromere in 1RS.1BL translocations. New 1R translocations with different centromere structures were created to help understand the fusion centromere used for wheat breeding and for use as breeding material for the improvement of wheat. © 2017 The Authors The Plant Journal © 2017 John Wiley & Sons Ltd.

  1. Chitosan biopolymer for fuel cell applications.

    PubMed

    Ma, Jia; Sahai, Yogeshwar

    2013-02-15

    Fuel cell is an electrochemical device which converts chemical energy stored in a fuel into electrical energy. Fuel cells have been receiving attention due to its potential applicability as a good alternative power source. Recently, cost-effective and eco-friendly biopolymer chitosan has been extensively studied as a material for membrane electrolytes and electrodes in low to intermediate temperature hydrogen polymer electrolyte fuel cell, direct methanol fuel cell, alkaline fuel cell, and biofuel cell. This paper reviews structure and property of chitosan with respect to its applications in fuel cells. Recent achievements and prospect of its applications have also been included. Copyright © 2012 Elsevier Ltd. All rights reserved.

  2. Electrical study on Carboxymethyl Cellulose-Polyvinyl alcohol based bio-polymer blend electrolytes

    NASA Astrophysics Data System (ADS)

    Saadiah, M. A.; Samsudin, A. S.

    2018-04-01

    The present work deals with the formulation of bio-materials namely carboxymethyl cellulose (CMC) and polyvinyl alcohol (PVA) for bio-polymer blend electrolytes (BBEs) system which was successfully carried out with different ratio of polymer blend. The biopolymer blend was prepared via economical & classical technique that is solution casting technique and was characterized by using impedance spectroscopy (EIS). The ionic conductivity was achieved to optimum value 9.12 x 10-6 S/cm at room temperature for sample containing ratio 80:20 of CMC:PVA. The highest conducting sample was found to obey the Arrhenius behaviour with a function of temperature. The electrical properties were analyzed using complex permittivity ε* and complex electrical modulus M* for BBEs system and it shows the non-Debye characteristics where no single relaxation time has observed.

  3. Translocation of cell-penetrating peptides into Candida fungal pathogens.

    PubMed

    Gong, Zifan; Karlsson, Amy J

    2017-09-01

    Cell-penetrating peptides (CPPs) are small peptides capable of crossing cellular membranes while carrying molecular cargo. Although they have been widely studied for their ability to translocate nucleic acids, small molecules, and proteins into mammalian cells, studies of their interaction with fungal cells are limited. In this work, we evaluated the translocation of eleven fluorescently labeled peptides into the important human fungal pathogens Candida albicans and C. glabrata and explored the mechanisms of translocation. Seven of these peptides (cecropin B, penetratin, pVEC, MAP, SynB, (KFF) 3 K, and MPG) exhibited substantial translocation (>80% of cells) into both species in a concentration-dependent manner, and an additional peptide (TP-10) exhibiting strong translocation into only C. glabrata. Vacuoles were involved in translocation and intracellular trafficking of the peptides in the fungal cells and, for some peptides, escape from the vacuoles and localization in the cytosol were correlated to toxicity toward the fungal cells. Endocytosis was involved in the translocation of cecropin B, MAP, SynB, MPG, (KFF) 3 K, and TP-10, and cecropin B, penetratin, pVEC, and MAP caused membrane permeabilization during translocation. These results indicate the involvement of multiple translocation mechanisms for some CPPs. Although high levels of translocation were typically associated with toxicity of the peptides toward the fungal cells, SynB was translocated efficiently into Candida cells at concentrations that led to minimal toxicity. Our work highlights the potential of CPPs in delivering antifungal molecules and other bioactive cargo to Candida pathogens. © 2017 The Protein Society.

  4. Decomposition and transformation of cutin and cutan biopolymers in soils: effect on their sorptive capabilities

    NASA Astrophysics Data System (ADS)

    Shechter, M.; Chefetz, B.

    2009-04-01

    Plant cuticle materials, especially the highly aliphatic biopolymers cutin and cutan, have been reported as highly efficient natural sorbents. The objective of this study was to examine the effects of decomposition on their sorption behavior with naphthol and phenanthrene. The level of cutin and cutan was reduced by 15 and 27% respectively during the first 3 mo of incubation. From that point, the level of the cutan did not change, while the level of the cutin continued to decrease up to 32% after 20 mo. 13C NMR analysis suggested transformation of cutan mainly within its alkyl-C structure which are assigned as crystalline moieties. Cutin, however, did not exhibit significant structure changes with time. The level of humic-like substances increased due to cutin decomposition but was not influenced in the cutan system after 20 mo of incubation. This indicates that the cutin biopolymer has been decomposed and transformed into humic-like substances, whereas the cutan was less subject to transformation. Decomposition affected sorption properties in similar trends for both cutin and cutan. The Freundlich capacity coefficients (KFOC) of naphthol were much lower than phenanthrene and were less influenced by the decomposition, whereas with phenanthrene KFOC values increased significantly with time. Naphthol exhibited non-linear isotherms; and nonlinearity was decreased with incubation time. In contrast, phenanthrene isotherms were more linear and showed only moderate change with time. The decrease in the linearity of naphthol isotherms might relate to the transformation of the sorption sites due to structural changes in the biopolymers. However, with phenanthrene, these changes did not affect sorption linearity but increased sorption affinities mainly for cutan. This is probably due to decomposition of the rigid alkyl-C moieties in the cutan biopolymer. Our data suggest that both biopolymers were relatively stable in the soil for 20 mo. Cutan is less degradable than cutin

  5. Theory of quantized systems: formal basis for DEVS/HLA distributed simulation environment

    NASA Astrophysics Data System (ADS)

    Zeigler, Bernard P.; Lee, J. S.

    1998-08-01

    In the context of a DARPA ASTT project, we are developing an HLA-compliant distributed simulation environment based on the DEVS formalism. This environment will provide a user- friendly, high-level tool-set for developing interoperable discrete and continuous simulation models. One application is the study of contract-based predictive filtering. This paper presents a new approach to predictive filtering based on a process called 'quantization' to reduce state update transmission. Quantization, which generates state updates only at quantum level crossings, abstracts a sender model into a DEVS representation. This affords an alternative, efficient approach to embedding continuous models within distributed discrete event simulations. Applications of quantization to message traffic reduction are discussed. The theory has been validated by DEVSJAVA simulations of test cases. It will be subject to further test in actual distributed simulations using the DEVS/HLA modeling and simulation environment.

  6. Polymer quantization of the Einstein-Rosen wormhole throat

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kunstatter, Gabor; Peltola, Ari; Louko, Jorma

    2010-01-15

    We present a polymer quantization of spherically symmetric Einstein gravity in which the polymerized variable is the area of the Einstein-Rosen wormhole throat. In the classical polymer theory, the singularity is replaced by a bounce at a radius that depends on the polymerization scale. In the polymer quantum theory, we show numerically that the area spectrum is evenly spaced and in agreement with a Bohr-Sommerfeld semiclassical estimate, and this spectrum is not qualitatively sensitive to issues of factor ordering or boundary conditions except in the lowest few eigenvalues. In the limit of small polymerization scale we recover, within the numericalmore » accuracy, the area spectrum obtained from a Schroedinger quantization of the wormhole throat dynamics. The prospects of recovering from the polymer throat theory a full quantum-corrected spacetime are discussed.« less

  7. Distance learning in discriminative vector quantization.

    PubMed

    Schneider, Petra; Biehl, Michael; Hammer, Barbara

    2009-10-01

    Discriminative vector quantization schemes such as learning vector quantization (LVQ) and extensions thereof offer efficient and intuitive classifiers based on the representation of classes by prototypes. The original methods, however, rely on the Euclidean distance corresponding to the assumption that the data can be represented by isotropic clusters. For this reason, extensions of the methods to more general metric structures have been proposed, such as relevance adaptation in generalized LVQ (GLVQ) and matrix learning in GLVQ. In these approaches, metric parameters are learned based on the given classification task such that a data-driven distance measure is found. In this letter, we consider full matrix adaptation in advanced LVQ schemes. In particular, we introduce matrix learning to a recent statistical formalization of LVQ, robust soft LVQ, and we compare the results on several artificial and real-life data sets to matrix learning in GLVQ, a derivation of LVQ-like learning based on a (heuristic) cost function. In all cases, matrix adaptation allows a significant improvement of the classification accuracy. Interestingly, however, the principled behavior of the models with respect to prototype locations and extracted matrix dimensions shows several characteristic differences depending on the data sets.

  8. Visual data mining for quantized spatial data

    NASA Technical Reports Server (NTRS)

    Braverman, Amy; Kahn, Brian

    2004-01-01

    In previous papers we've shown how a well known data compression algorithm called Entropy-constrained Vector Quantization ( can be modified to reduce the size and complexity of very large, satellite data sets. In this paper, we descuss how to visualize and understand the content of such reduced data sets.

  9. Quantization of Gaussian samples at very low SNR regime in continuous variable QKD applications

    NASA Astrophysics Data System (ADS)

    Daneshgaran, Fred; Mondin, Marina

    2016-09-01

    The main problem for information reconciliation in continuous variable Quantum Key Distribution (QKD) at low Signal to Noise Ratio (SNR) is quantization and assignment of labels to the samples of the Gaussian Random Variables (RVs) observed at Alice and Bob. Trouble is that most of the samples, assuming that the Gaussian variable is zero mean which is de-facto the case, tend to have small magnitudes and are easily disturbed by noise. Transmission over longer and longer distances increases the losses corresponding to a lower effective SNR exasperating the problem. This paper looks at the quantization problem of the Gaussian samples at very low SNR regime from an information theoretic point of view. We look at the problem of two bit per sample quantization of the Gaussian RVs at Alice and Bob and derive expressions for the mutual information between the bit strings as a result of this quantization. The quantization threshold for the Most Significant Bit (MSB) should be chosen based on the maximization of the mutual information between the quantized bit strings. Furthermore, while the LSB string at Alice and Bob are balanced in a sense that their entropy is close to maximum, this is not the case for the second most significant bit even under optimal threshold. We show that with two bit quantization at SNR of -3 dB we achieve 75.8% of maximal achievable mutual information between Alice and Bob, hence, as the number of quantization bits increases beyond 2-bits, the number of additional useful bits that can be extracted for secret key generation decreases rapidly. Furthermore, the error rates between the bit strings at Alice and Bob at the same significant bit level are rather high demanding very powerful error correcting codes. While our calculations and simulation shows that the mutual information between the LSB at Alice and Bob is 0.1044 bits, that at the MSB level is only 0.035 bits. Hence, it is only by looking at the bits jointly that we are able to achieve a

  10. Milliscale Self-Integration of Megamolecule Biopolymers on a Drying Gas-Aqueous Liquid Crystalline Interface.

    PubMed

    Okeyoshi, Kosuke; Okajima, Maiko K; Kaneko, Tatsuo

    2016-06-13

    A drying environment is always a proposition faced by dynamic living organisms using water, which are driven by biopolymer-based micro- and macrostructures. Here, we introduce a drying process for aqueous liquid crystalline (LC) solutions composed of biopolymer with extremely high molecular weight components such as polysaccharides, cytoskeletal proteins, and DNA. On controlling the mobility of the LC microdomain, the solutions showed milliscale self-integration starting from the unstable gas-LC interface during drying. In particular, we first identified giant rod-like microdomains (∼1 μm diameter and more than 20 μm length) of the mega-molecular polysaccharide, sacran, which is remarkably larger than other polysaccharides. These microdomains led to the formation of a single milliscale macrodomain on the interface. In addition, the dried polymer films on a solid substrate also revealed that such integration depends on the size of the microdomain. We envision that this simple drying method will be useful not only for understanding the biopolymer hierarchization at the macroscale level but also for preparation of surfaces with direction controllability, as seen in living organisms, for use in various fields such as diffusion, mechanics, and photonics.

  11. Geophysical and Geotechnical Characterization of Beta-1,3/1,6-glucan Biopolymer treated Soil

    NASA Astrophysics Data System (ADS)

    Chang, I.; Cho, G.

    2012-12-01

    Bacteria or microbes in soil excrete hydrocarbon (e.g. polysaccharide) by-products which are called biopolymers. These biopolymers (or sometime biofilms) recently begun to make a mark on soil erosion control, aggregate stabilization, and drilling enhancement. However, the biological effect on soil behavior (e.g. bio-clogging or bio-cementation) has been poorly understood. In this study, the bio-cementation and bio-clogging effect induced by the existence of β-1,3/1,6-glucan biopolymers in soil were evaluated through a series of geophysical and geotechnical characterization tests in laboratory. According to the experimental test results, as the β-1,3/1,6-glucan content in soil increases, the compressive strength and shear wave velocity increase (i.e., bio-cementation) while the hydraulic conductivity decreases (i.e., bio-clogging) but the electrical conductivity increases due to the high electrical conductivity characteristic of β-1,3/1,6-glucan fibers. Coefficient of consolidation variation with the increases of β-1,3/1,6-glucan content in soil. SEM image of β-1,3/1,6-glucan treated soil. Fibers are form matices with soil particles.

  12. Biopolymers Containing Unnatural Amino Acids

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Schultz, Peter

    Although the main chain structure of polymers has a profound effect on their materials properties, the side groups can also have dramatic effects on their properties including conductivity, liquid crystallinity, hydrophobicity, elasticity and biodegradability. Unfortunately control over the side chain structure of polymers remains a challenge – it is difficult to control the sequence of chain elongation when mixtures of monomers are polymerized, and postpolymerization side chain modification is made difficult by polymer effects on side chain reactivity. In contrast, the mRNA templated synthesis of polypeptides on the ribosome affords absolute control over the primary sequence of the twenty aminomore » acid monomers. Moreover, the length of the biopolymer is precisely controlled as are sites of crosslinking. However, whereas synthetic polymers can be synthesized from monomers with a wide range of chemically defined structures, ribosomal biosynthesis is largely limited to the 20 canonical amino acids. For many applications in material sciences, additional building blocks would be desirable, for example, amino acids containing metallocene, photoactive, and halogenated side chains. To overcome this natural constraint we have developed a method that allows unnatural amino acids, beyond the common twenty, to be genetically encoded in response to nonsense or frameshift codons in bacteria, yeast and mammalian cells with high fidelity and good yields. Here we have developed methods that allow identical or distinct noncanonical amino acids to be incorporated at multiple sites in a polypeptide chain, potentially leading to a new class of templated biopolymers. We have also developed improved methods for genetically encoding unnatural amino acids. In addition, we have genetically encoded new amino acids with novel physical and chemical properties that allow selective modification of proteins with synthetic agents. Finally, we have evolved new metal-ion binding sites in

  13. Biopolymers Containing Unnatural Building Blocks

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Schultz, Peter G.

    2013-06-30

    Although the main chain structure of polymers has a profound effect on their materials properties, the side groups can also have dramatic effects on their properties including conductivity, liquid crystallinity, hydrophobicity, elasticity and biodegradability. Unfortunately control over the side chain structure of polymers remains a challenge – it is difficult to control the sequence of chain elongation when mixtures of monomers are polymerized, and postpolymerization side chain modification is made difficult by polymer effects on side chain reactivity. In contrast, the mRNA templated synthesis of polypeptides on the ribosome affords absolute control over the primary sequence of the twenty aminomore » acid monomers. Moreover, the length of the biopolymer is precisely controlled as are sites of crosslinking. However, whereas synthetic polymers can be synthesized from monomers with a wide range of chemically defined structures, ribosomal biosynthesis is largely limited to the 20 canonical amino acids. For many applications in material sciences, additional building blocks would be desirable, for example, amino acids containing metallocene, photoactive, and halogenated side chains. To overcome this natural constraint we have developed a method that allows unnatural amino acids, beyond the common twenty, to be genetically encoded in response to nonsense or frameshift codons in bacteria, yeast and mammalian cells with high fidelity and good yields. Here we have developed methods that allow identical or distinct noncanonical amino acids to be incorporated at multiple sites in a polypeptide chain, potentially leading to a new class of templated biopolymers. We have also developed improved methods for genetically encoding unnatural amino acids. In addition, we have genetically encoded new amino acids with novel physical and chemical properties that allow selective modification of proteins with synthetic agents. Finally, we have evolved new metal-ion binding sites in

  14. Fibroblast growth factor receptor 2 translocations in intrahepatic cholangiocarcinoma.

    PubMed

    Graham, Rondell P; Barr Fritcher, Emily G; Pestova, Ekaterina; Schulz, John; Sitailo, Leonid A; Vasmatzis, George; Murphy, Stephen J; McWilliams, Robert R; Hart, Steven N; Halling, Kevin C; Roberts, Lewis R; Gores, Gregory J; Couch, Fergus J; Zhang, Lizhi; Borad, Mitesh J; Kipp, Benjamin R

    2014-08-01

    Patients with cholangiocarcinoma often present with locally advanced or metastatic disease. There is a need for effective therapeutic strategies for advanced stage cholangiocarcinoma. Recently, FGFR2 translocations have been identified as a potential target for tyrosine kinase inhibitor therapies. This study evaluated 152 cholangiocarcinomas and 4 intraductal papillary biliary neoplasms of the bile duct for presence of FGFR2 translocations by fluorescence in situ hybridization and characterized the clinicopathologic features of cases with FGFR2 translocations. Thirteen (10 women, 3 men; 8%) of 156 biliary tumors harbored FGFR2 translocations, including 12 intrahepatic cholangiocarcinomas (12/96; 13%) and 1 intraductal papillary neoplasm of the bile duct. Histologically, cholangiocarcinomas with FGFR2 translocations displayed prominent intraductal growth (62%) or anastomosing tubular glands with desmoplasia (38%). Immunohistochemically, the tumors with FGFR2 translocations frequently showed weak and patchy expression of CK19 (77%). Markers of the stem cell phenotype in cholangiocarcinoma, HepPar1 and CK20, were negative in all cases. The median cancer-specific survival for patients whose tumors harbored FGFR2 translocations was 123 months compared to 37 months for cases without FGFR2 translocations (P = .039). This study also assessed 100 cholangiocarcinomas for ERBB2 amplification and ROS1 translocations. Of the cases tested, 3% and 1% were positive for ERBB2 amplification and ROS1 translocation, respectively. These results confirm that FGFR2, ERRB2, and ROS1 alterations are potential therapeutic targets for intrahepatic cholangiocarcinoma. Copyright © 2014 Elsevier Inc. All rights reserved.

  15. Conflict Bear Translocation: Investigating Population Genetics and Fate of Bear Translocation in Dachigam National Park, Jammu and Kashmir, India

    PubMed Central

    Mukesh; Sharma, Lalit Kumar; Charoo, Samina Amin; Sathyakumar, Sambandam

    2015-01-01

    The Asiatic black bear population in Dachigam landscape, Jammu and Kashmir is well recognized as one of the highest density bear populations in India. Increasing incidences of bear-human interactions and the resultant retaliatory killings by locals have become a serious threat to the survivorship of black bears in the Dachigam landscape. The Department of Wildlife Protection in Jammu and Kashmir has been translocating bears involved in conflicts, henceforth ‘conflict bears’ from different sites in Dachigam landscape to Dachigam National Park as a flagship activity to mitigate conflicts. We undertook this study to investigate the population genetics and the fate of bear translocation in Dachigam National Park. We identified 109 unique genotypes in an area of ca. 650 km2 and observed bear population under panmixia that showed sound genetic variability. Molecular tracking of translocated bears revealed that mostly bears (7 out of 11 bears) returned to their capture sites, possibly due to homing instincts or habituation to the high quality food available in agricultural croplands and orchards, while only four bears remained in Dachigam National Park after translocation. Results indicated that translocation success was most likely to be season dependent as bears translocated during spring and late autumn returned to their capture sites, perhaps due to the scarcity of food inside Dachigam National Park while bears translocated in summer remained in Dachigam National Park due to availability of surplus food resources. Thus, the current management practices of translocating conflict bears, without taking into account spatio-temporal variability of food resources in Dachigam landscape seemed to be ineffective in mitigating conflicts on a long-term basis. However, the study highlighted the importance of molecular tracking of bears to understand their movement patterns and socio-biology in tough terrains like Dachigam landscape. PMID:26267280

  16. Conflict bear translocation: investigating population genetics and fate of bear translocation in Dachigam National Park, Jammu and Kashmir, India.

    PubMed

    Mukesh; Sharma, Lalit Kumar; Charoo, Samina Amin; Sathyakumar, Sambandam

    2015-01-01

    The Asiatic black bear population in Dachigam landscape, Jammu and Kashmir is well recognized as one of the highest density bear populations in India. Increasing incidences of bear-human interactions and the resultant retaliatory killings by locals have become a serious threat to the survivorship of black bears in the Dachigam landscape. The Department of Wildlife Protection in Jammu and Kashmir has been translocating bears involved in conflicts, henceforth 'conflict bears' from different sites in Dachigam landscape to Dachigam National Park as a flagship activity to mitigate conflicts. We undertook this study to investigate the population genetics and the fate of bear translocation in Dachigam National Park. We identified 109 unique genotypes in an area of ca. 650 km2 and observed bear population under panmixia that showed sound genetic variability. Molecular tracking of translocated bears revealed that mostly bears (7 out of 11 bears) returned to their capture sites, possibly due to homing instincts or habituation to the high quality food available in agricultural croplands and orchards, while only four bears remained in Dachigam National Park after translocation. Results indicated that translocation success was most likely to be season dependent as bears translocated during spring and late autumn returned to their capture sites, perhaps due to the scarcity of food inside Dachigam National Park while bears translocated in summer remained in Dachigam National Park due to availability of surplus food resources. Thus, the current management practices of translocating conflict bears, without taking into account spatio-temporal variability of food resources in Dachigam landscape seemed to be ineffective in mitigating conflicts on a long-term basis. However, the study highlighted the importance of molecular tracking of bears to understand their movement patterns and socio-biology in tough terrains like Dachigam landscape.

  17. Measuring peptide translocation into large unilamellar vesicles.

    PubMed

    Spinella, Sara A; Nelson, Rachel B; Elmore, Donald E

    2012-01-27

    There is an active interest in peptides that readily cross cell membranes without the assistance of cell membrane receptors(1). Many of these are referred to as cell-penetrating peptides, which are frequently noted for their potential as drug delivery vectors(1-3). Moreover, there is increasing interest in antimicrobial peptides that operate via non-membrane lytic mechanisms(4,5), particularly those that cross bacterial membranes without causing cell lysis and kill cells by interfering with intracellular processes(6,7). In fact, authors have increasingly pointed out the relationship between cell-penetrating and antimicrobial peptides(1,8). A firm understanding of the process of membrane translocation and the relationship between peptide structure and its ability to translocate requires effective, reproducible assays for translocation. Several groups have proposed methods to measure translocation into large unilamellar lipid vesicles (LUVs)(9-13). LUVs serve as useful models for bacterial and eukaryotic cell membranes and are frequently used in peptide fluorescent studies(14,15). Here, we describe our application of the method first developed by Matsuzaki and co-workers to consider antimicrobial peptides, such as magainin and buforin II(16,17). In addition to providing our protocol for this method, we also present a straightforward approach to data analysis that quantifies translocation ability using this assay. The advantages of this translocation assay compared to others are that it has the potential to provide information about the rate of membrane translocation and does not require the addition of a fluorescent label, which can alter peptide properties(18), to tryptophan-containing peptides. Briefly, translocation ability into lipid vesicles is measured as a function of the Foster Resonance Energy Transfer (FRET) between native tryptophan residues and dansyl phosphatidylethanolamine when proteins are associated with the external LUV membrane (Figure 1). Cell

  18. Equivalence of Einstein and Jordan frames in quantized anisotropic cosmological models

    NASA Astrophysics Data System (ADS)

    Pandey, Sachin; Pal, Sridip; Banerjee, Narayan

    2018-06-01

    The present work shows that the mathematical equivalence of the Jordan frame and its conformally transformed version, the Einstein frame, so as far as Brans-Dicke theory is concerned, survives a quantization of cosmological models, arising as solutions to the Brans-Dicke theory. We work with the Wheeler-deWitt quantization scheme and take up quite a few anisotropic cosmological models as examples. We effectively show that the transformation from the Jordan to the Einstein frame is a canonical one and hence two frames furnish equivalent description of same physical scenario.

  19. Integral Sliding Mode Fault-Tolerant Control for Uncertain Linear Systems Over Networks With Signals Quantization.

    PubMed

    Hao, Li-Ying; Park, Ju H; Ye, Dan

    2017-09-01

    In this paper, a new robust fault-tolerant compensation control method for uncertain linear systems over networks is proposed, where only quantized signals are assumed to be available. This approach is based on the integral sliding mode (ISM) method where two kinds of integral sliding surfaces are constructed. One is the continuous-state-dependent surface with the aim of sliding mode stability analysis and the other is the quantization-state-dependent surface, which is used for ISM controller design. A scheme that combines the adaptive ISM controller and quantization parameter adjustment strategy is then proposed. Through utilizing H ∞ control analytical technique, once the system is in the sliding mode, the nature of performing disturbance attenuation and fault tolerance from the initial time can be found without requiring any fault information. Finally, the effectiveness of our proposed ISM control fault-tolerant schemes against quantization errors is demonstrated in the simulation.

  20. Financial Costs of Large Carnivore Translocations – Accounting for Conservation

    PubMed Central

    Weise, Florian J.; Stratford, Ken J.; van Vuuren, Rudolf J.

    2014-01-01

    Human-carnivore conflict continues to present a major conservation challenge around the world. Translocation of large carnivores is widely implemented but remains strongly debated, in part because of a lack of cost transparency. We report detailed translocation costs for three large carnivore species in Namibia and across different translocation scenarios. We consider the effect of various parameters and factors on costs and translocation success. Total translocation cost for 30 individuals in 22 events was $80,681 (US Dollars). Median translocation cost per individual was $2,393, and $2,669 per event. Median cost per cheetah was $2,760 (n = 23), and $2,108 per leopard (n = 6). One hyaena was translocated at a cost of $1,672. Tracking technology was the single biggest cost element (56%), followed by captive holding and feeding. Soft releases, prolonged captivity and orphaned individuals also increased case-specific costs. A substantial proportion (65.4%) of the total translocation cost was successfully recovered from public interest groups. Less than half the translocations were confirmed successes (44.4%, 3 unknown) with a strong species bias. Four leopards (66.7%) were successfully translocated but only eight of the 20 cheetahs (40.0%) with known outcome met these strict criteria. None of the five habituated cheetahs was translocated successfully, nor was the hyaena. We introduce the concept of Individual Conservation Cost (ICC) and define it as the cost of one successfully translocated individual adjusted by costs of unsuccessful events of the same species. The median ICC for cheetah was $6,898 and $3,140 for leopard. Translocations are costly, but we demonstrate that they are not inherently more expensive than other strategies currently employed in non-lethal carnivore conflict management. We conclude that translocation should be one available option for conserving large carnivores, but needs to be critically evaluated on a case-by-case basis. PMID

  1. Table look-up estimation of signal and noise parameters from quantized observables

    NASA Technical Reports Server (NTRS)

    Vilnrotter, V. A.; Rodemich, E. R.

    1986-01-01

    A table look-up algorithm for estimating underlying signal and noise parameters from quantized observables is examined. A general mathematical model is developed, and a look-up table designed specifically for estimating parameters from four-bit quantized data is described. Estimator performance is evaluated both analytically and by means of numerical simulation, and an example is provided to illustrate the use of the look-up table for estimating signal-to-noise ratios commonly encountered in Voyager-type data.

  2. A fluorescence assay for peptide translocation into mitochondria.

    PubMed

    Martinez-Caballero, Sonia; Peixoto, Pablo M V; Kinnally, Kathleen W; Campo, María Luisa

    2007-03-01

    Translocation of the presequence is an early event in import of preproteins across the mitochondrial inner membrane by the TIM23 complex. Import of signal peptides, whose sequences mimic mitochondrial import presequences, was measured using a novel, qualitative, fluorescence assay in about 1h. This peptide assay was used in conjunction with classical protein import analyses and electrophysiological approaches to examine the mechanisms underlying the functional effects of depleting two TIM23 complex components. Tim23p forms, at least in part, the pore of this complex while Tim44p forms part of the translocation motor. Depletion of Tim23p eliminates TIM23 channel activity, which interferes with both peptide and preprotein translocation. In contrast, depletion of Tim44p disrupts preprotein but not peptide translocation, which has no effect on TIM23 channel activity. Two conclusions were made. First, this fluorescence peptide assay was validated as two different mutants were accurately identified. Hence, this assay could provide a rapid means of screening mutants to identify those that fail an initial step in import, i.e., translocation of the presequence. Second, translocation of signal peptides required normal channel activity and disruption of the presequence translocase-associated motor complex did not modify TIM23 channel activity nor prevent presequence translocation.

  3. Sub-Selective Quantization for Learning Binary Codes in Large-Scale Image Search.

    PubMed

    Li, Yeqing; Liu, Wei; Huang, Junzhou

    2018-06-01

    Recently with the explosive growth of visual content on the Internet, large-scale image search has attracted intensive attention. It has been shown that mapping high-dimensional image descriptors to compact binary codes can lead to considerable efficiency gains in both storage and performing similarity computation of images. However, most existing methods still suffer from expensive training devoted to large-scale binary code learning. To address this issue, we propose a sub-selection based matrix manipulation algorithm, which can significantly reduce the computational cost of code learning. As case studies, we apply the sub-selection algorithm to several popular quantization techniques including cases using linear and nonlinear mappings. Crucially, we can justify the resulting sub-selective quantization by proving its theoretic properties. Extensive experiments are carried out on three image benchmarks with up to one million samples, corroborating the efficacy of the sub-selective quantization method in terms of image retrieval.

  4. Rheological and mechanical properties of recycled polyethylene films contaminated by biopolymer.

    PubMed

    Gere, D; Czigany, T

    2018-06-01

    Nowadays, with the increasing amount of biopolymers used, it can be expected that biodegradable polymers (e.g. PLA, PBAT) may appear in the petrol-based polymer waste stream. However, their impact on the recycling processes is not known yet; moreover, the properties of the products made from contaminated polymer blends are not easily predictable. Therefore, our goal was to investigate the rheological and mechanical properties of synthetic and biopolymer compounds. We made different compounds from regranulates of mixed polyethylene film waste and original polylactic acid (PLA) by extruison, and injection molded specimens from the compounds. We investigated the rheological properties of the regranulates, and the mechanical properties of the samples. When PLA was added, the viscosity and specific volume of all the blends decreased, and mechanical properties (tensile strength, modulus, and impact strength) changed significantly. Young's modulus increased, while elongation at break and impact strength decreased with the increase of the weight fraction of PLA. Copyright © 2018 Elsevier Ltd. All rights reserved.

  5. Quantization of Poisson Manifolds from the Integrability of the Modular Function

    NASA Astrophysics Data System (ADS)

    Bonechi, F.; Ciccoli, N.; Qiu, J.; Tarlini, M.

    2014-10-01

    We discuss a framework for quantizing a Poisson manifold via the quantization of its symplectic groupoid, combining the tools of geometric quantization with the results of Renault's theory of groupoid C*-algebras. This setting allows very singular polarizations. In particular, we consider the case when the modular function is multiplicatively integrable, i.e., when the space of leaves of the polarization inherits a groupoid structure. If suitable regularity conditions are satisfied, then one can define the quantum algebra as the convolution algebra of the subgroupoid of leaves satisfying the Bohr-Sommerfeld conditions. We apply this procedure to the case of a family of Poisson structures on , seen as Poisson homogeneous spaces of the standard Poisson-Lie group SU( n + 1). We show that a bihamiltonian system on defines a multiplicative integrable model on the symplectic groupoid; we compute the Bohr-Sommerfeld groupoid and show that it satisfies the needed properties for applying Renault theory. We recover and extend Sheu's description of quantum homogeneous spaces as groupoid C*-algebras.

  6. Surface Morphology of Vapor-Deposited Chitosan: Evidence of Solid-State Dewetting during the Formation of Biopolymer Films.

    PubMed

    Retamal, Maria Jose; Corrales, Tomas P; Cisternas, Marcelo A; Moraga, Nicolas H; Diaz, Diego I; Catalan, Rodrigo E; Seifert, Birger; Huber, Patrick; Volkmann, Ulrich G

    2016-03-14

    Chitosan is a useful and versatile biopolymer with several industrial and biological applications. Whereas its physical and physicochemical bulk properties have been explored quite intensively in the past, there is a lack of studies regarding the morphology and growth mechanisms of thin films of this biopolymer. Of particular interest for applications in bionanotechnology are ultrathin films with thicknesses under 500 Å. Here, we present a study of thin chitosan films prepared in a dry process using physical vapor deposition and in situ ellipsometric monitoring. The prepared films were analyzed with atomic force microscopy in order to correlate surface morphology with evaporation parameters. We find that the surface morphology of our final thin films depends on both the optical thickness, i.e., measured with ellipsometry, and the deposition rate. Our work shows that ultrathin biopolymer films can undergo dewetting during film formation, even in the absence of solvents and thermal annealing.

  7. BFV-BRST quantization of two-dimensional supergravity

    NASA Astrophysics Data System (ADS)

    Fujiwara, T.; Igarashi, Y.; Kuriki, R.; Tabei, T.

    1996-01-01

    Two-dimensional supergravity theory is quantized as an anomalous gauge theory. In the Batalin-Fradkin (BF) formalism, the anomaly-canceling super-Liouville fields are introduced to identify the original second-class constrained system with a gauge-fixed version of a first-class system. The BFV-BRST quantization applies to formulate the theory in the most general class of gauges. A local effective action constructed in the configuration space contains two super-Liouville actions; one is a noncovariant but local functional written only in terms of two-dimensional supergravity fields, and the other contains the super-Liouville fields canceling the super-Weyl anomaly. Auxiliary fields for the Liouville and the gravity supermultiplets are introduced to make the BRST algebra close off-shell. Inclusion of them turns out to be essentially important especially in the super-light-cone gauge fixing, where the supercurvature equations (∂3-g++=∂2-χ++=0) are obtained as a result of BRST invariance of the theory. Our approach reveals the origin of the OSp(1,2) current algebra symmetry in a transparent manner.

  8. A Quantized Metric As an Alternative to Dark Matter

    NASA Astrophysics Data System (ADS)

    Maker, Joel

    2010-03-01

    The cosmological spherical symmetry background metric coefficient (g44≡) g00= 1-2GM/c^2r should be inserted into a Dirac equation σμ(gμμγ^μψ/xμ)-φψ = 0 (1,Maker) to make it generally covariant. The spin of this cosmological Dirac object is nearly unobservable due to inertial frame dragging and has rotational L(L+1) δɛ and oscillatory ɛ interactions with external objects at distance away r>>10^10 LY. The inside and outside frequencies φ match at the boundary allowing the outside metric eigenvalues to propagate inside. To include the correct 3 lepton masses in this Dirac equation we must use ansatz goo= e^i(2ɛ+δɛ) with ɛ=.06, δɛ=.00058. For local metric effects our ansatz is goo=e^iδɛ. Here the metric coefficient goo levels off to the quantized value e^iδɛ in the galaxy halo: goo=1-2GM/rc^2-> rel(e^iδɛ) =cos(δɛ)= 1-(δɛ)^2/2 ->(δɛ)^2/2=2GM/rc^2 for this circular motion v^2/r=GM/r^2=c^2(δɛ)^2/4r ->v^2 =c^2(δɛ)^2/4 =87km/sec)^2 100km/sec)^2. So the metric acts to quantize v. Note also there is rotational energy quantization for the δɛ rotational states that goes as: (L(L+1)) .5ex1 -.1em/ -.15em.25ex2 mv^2 ->√L(L+1) v. Thus differences in v are proportional to L, L being an integer. Therefore δv = kL so v = 1k, v = 2k, v = 3k, v = 4k. v=N (the above ˜100km/sec) with dark matter then not required to give these high halo velocities. Recent nearby galaxy Doppler halo velocity data strongly support this velocity quantization result.

  9. The canonical quantization of chaotic maps on the torus

    NASA Astrophysics Data System (ADS)

    Rubin, Ron Shai

    In this thesis, a quantization method for classical maps on the torus is presented. The quantum algebra of observables is defined as the quantization of measurable functions on the torus with generators exp (2/pi ix) and exp (2/pi ip). The Hilbert space we use remains the infinite-dimensional L2/ (/IR, dx). The dynamics is given by a unitary quantum propagator such that as /hbar /to 0, the classical dynamics is returned. We construct such a quantization for the Kronecker map, the cat map, the baker's map, the kick map, and the Harper map. For the cat map, we find the same for the propagator on the plane the same integral kernel conjectured in (HB) using semiclassical methods. We also define a quantum 'integral over phase space' as a trace over the quantum algebra. Using this definition, we proceed to define quantum ergodicity and mixing for maps on the torus. We prove that the quantum cat map and Kronecker map are both ergodic, but only the cat map is mixing, true to its classical origins. For Planck's constant satisfying the integrality condition h = 1/N, with N/in doubz+, we construct an explicit isomorphism between L2/ (/IR, dx) and the Hilbert space of sections of an N-dimensional vector bundle over a θ-torus T2 of boundary conditions. The basis functions are distributions in L2/ (/IR, dx), given by an infinite comb of Dirac δ-functions. In Bargmann space these distributions take on the form of Jacobi ϑ-functions. Transformations from position to momentum representation can be implemented via a finite N-dimensional discrete Fourier transform. With the θ-torus, we provide a connection between the finite-dimensional quantum maps given in the physics literature and the canonical quantization presented here and found in the language of pseudo-differential operators elsewhere in mathematics circles. Specifically, at a fixed point of the dynamics on the θ-torus, we return a finite-dimensional matrix propagator. We present this connection explicitly for several

  10. Range-wide success of red-cockaded woodpecker translocations.

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Edwards, John W; Costa, Ralph

    2004-12-31

    Edwards, John W.; Costa, Ralph. 2004. Range-wide success of red-cockaded woodpecker translocations. In: Red-cockaded woodpecker; Road to Recovery. Proceedings of the 4th Red-cockaded woodpecker Symposium. Ralph Costa and Susan J. Daniels, eds. Savannah, Georgia. January, 2003. Chapter 6. Translocation. Pp 307-311. Abstract: Red-cockaded woodpeckers (Picoides borealis) have declined range-wide during the past century, suffering from habitat loss and the effects of fire exclusion in older southern pine forests. Red-cockaded woodpecker translocations are a potentially important tool in conservation efforts to reestablish red-cockaded woodpeckers in areas from which they have been extirpated. Currently, translocations are critical in ongoing efforts to savemore » and restore the many existing small populations. We examined the effects of demographic and environmental factors on the range-wide success of translocations between 1989 and 1995.« less

  11. Translocations of amphibians: Proven management method or experimental technique

    USGS Publications Warehouse

    Seigel, Richard A.; Dodd, C. Kenneth

    2002-01-01

    In an otherwise excellent review of metapopulation dynamics in amphibians, Marsh and Trenham (2001) make the following provocative statements (emphasis added): If isolation effects occur primarily in highly disturbed habitats, species translocations may be necessary to promote local and regional population persistence. Because most amphibians lack parental care, they areprime candidates for egg and larval translocations. Indeed, translocations have already proven successful for several species of amphibians. Where populations are severely isolated, translocations into extinct subpopulations may be the best strategy to promote regional population persistence. We take issue with these statements for a number of reasons. First, the authors fail to cite much of the relevant literature on species translocations in general and for amphibians in particular. Second, to those unfamiliar with current research in amphibian conservation biology, these comments might suggest that translocations are a proven management method. This is not the case, at least in most instances where translocations have been evaluated for an appropriate period of time. Finally, the authors fail to point out some of the negative aspects of species translocation as a management method. We realize that Marsh and Trenham's paper was not concerned primarily with translocations. However, because Marsh and Trenham (2001) made specific recommendations for conservation planners and managers (many of whom are not herpetologists or may not be familiar with the pertinent literature on amphibians), we believe that it is essential to point out that not all amphibian biologists are as comfortable with translocations as these authors appear to be. We especially urge caution about advocating potentially unproven techniques without a thorough review of available options.

  12. De novo reciprocal translocation t(5;11)(q22;p15) associated with hydrops fetalis (reciprocal translocation and hydrops fetalis).

    PubMed

    Pala, Halil Gursoy; Artunc-Ulkumen, Burcu; Uyar, Yildiz; Bal, Filiz; Baytur, Yesim Bulbul; Koyuncu, Faik Mumtaz

    2015-02-01

    This is a case of a prenatally diagnosed non-immune hydrops fetalis (NIHF) associated with translocation t(5;11)(q22;p15). An association between NIHF and this translocation has not been reported previously. The patient was referred to the perinatology clinic with hydrops fetalis diagnosis at 23 weeks' gestation. We noted that the fetus had bilateral pleural effusion, ascites, widespread subcutaneous edema, membranous ventricular septal defect, hypoplastic fifth finger middle phalanx, clinodactyly, single umbilical artery. We performed cordocentesis. Chromosomal analysis on blood showed a balanced translocation between the long arm of chromosome 5 and the short arm of chromosome 11 with karyotype of 46,XX,t(5;11)(q22;p15). We present prenatal diagnosis of a de novo translocation (5;11) in a hydropic fetus with ultrason abnormalities. In our case, karyotype analysis of the fetus, mother and father provided evidence of a de novo translocation, that might explain the NIHF.

  13. Quantization ambiguities and bounds on geometric scalars in anisotropic loop quantum cosmology

    NASA Astrophysics Data System (ADS)

    Singh, Parampreet; Wilson-Ewing, Edward

    2014-02-01

    We study quantization ambiguities in loop quantum cosmology that arise for space-times with non-zero spatial curvature and anisotropies. Motivated by lessons from different possible loop quantizations of the closed Friedmann-Lemaître-Robertson-Walker cosmology, we find that using open holonomies of the extrinsic curvature, which due to gauge-fixing can be treated as a connection, leads to the same quantum geometry effects that are found in spatially flat cosmologies. More specifically, in contrast to the quantization based on open holonomies of the Ashtekar-Barbero connection, the expansion and shear scalars in the effective theories of the Bianchi type II and Bianchi type IX models have upper bounds, and these are in exact agreement with the bounds found in the effective theories of the Friedmann-Lemaître-Robertson-Walker and Bianchi type I models in loop quantum cosmology. We also comment on some ambiguities present in the definition of inverse triad operators and their role.

  14. Single Molecule Science for Personalized Nanomedicine: Atomic Force Microscopy of Biopolymer-Protein Interactions

    NASA Astrophysics Data System (ADS)

    Hsueh, Carlin

    Nanotechnology has a unique and relatively untapped utility in the fields of medicine and dentistry at the level of single-biopolymer and -molecule diagnostics. In recent years atomic force microscopy (AFM) has garnered much interest due to its ability to obtain atomic-resolution of molecular structures and probe biophysical behaviors of biopolymers and proteins in a variety of biologically significant environments. The work presented in this thesis focuses on the nanoscale manipulation and observation of biopolymers to develop an innovative technology for personalized medicine while understanding complex biological systems. These studies described here primarily use AFM to observe biopolymer interactions with proteins and its surroundings with unprecedented resolution, providing a better understanding of these systems and interactions at the nanoscale. Transcriptional profiling, the measure of messenger RNA (mRNA) abundance in a single cell, is a powerful technique that detects "behavior" or "symptoms" at the tissue and cellular level. We have sought to develop an alternative approach, using our expertise in AFM and single molecule nanotechnology, to achieve a cost-effective high throughput method for sensitive detection and profiling of subtle changes in transcript abundance. The technique does not require amplification of the mRNA sample because the AFM provides three-dimensional views of molecules with unprecedented resolution, requires minimal sample preparation, and utilizes a simple tagging chemistry on cDNA molecules. AFM images showed collagen polymers in teeth and of Drebrin-A remodeling of filamentous actin structure and mechanics. AFM was used to image collagen on exposed dentine tubules and confirmed tubule occlusion with a desensitizing prophylaxis paste by Colgate-Palmolive. The AFM also superseded other microscopy tools in resolving F-actin helix remodeling and possible cooperative binding by a neuronal actin binding protein---Drebrin-A, an

  15. Exact quantization of Einstein-Rosen waves coupled to massless scalar matter.

    PubMed

    Barbero G, J Fernando; Garay, Iñaki; Villaseñor, Eduardo J S

    2005-07-29

    We show in this Letter that gravity coupled to a massless scalar field with full cylindrical symmetry can be exactly quantized by an extension of the techniques used in the quantization of Einstein-Rosen waves. This system provides a useful test bed to discuss a number of issues in quantum general relativity, such as the emergence of the classical metric, microcausality, and large quantum gravity effects. It may also provide an appropriate framework to study gravitational critical phenomena from a quantum point of view, issues related to black hole evaporation, and the consistent definition of test fields and particles in quantum gravity.

  16. Covariant scalar representation of ? and quantization of the scalar relativistic particle

    NASA Astrophysics Data System (ADS)

    Jarvis, P. D.; Tsohantjis, I.

    1996-03-01

    A covariant scalar representation of iosp(d,2/2) is constructed and analysed in comparison with existing BFV-BRST methods for the quantization of the scalar relativistic particle. It is found that, with appropriately defined wavefunctions, this iosp(d,2/2) produced representation can be identified with the state space arising from the canonical BFV-BRST quantization of the modular-invariant, unoriented scalar particle (or antiparticle) with admissible gauge-fixing conditions. For this model, the cohomological determination of physical states can thus be obtained purely from the representation theory of the iosp(d,2/2) algebra.

  17. Understanding anisotropy and architecture in ice-templated biopolymer scaffolds.

    PubMed

    Pawelec, K M; Husmann, A; Best, S M; Cameron, R E

    2014-04-01

    Biopolymer scaffolds have great therapeutic potential within tissue engineering due to their large interconnected porosity and biocompatibility. Using an ice-templated technique, where collagen is concentrated into a porous network by ice nucleation and growth, scaffolds with anisotropic pore architecture can be created, mimicking natural tissues like cardiac muscle and bone. This paper describes a systematic set of experiments undertaken to understand the effect of local temperatures on architecture in ice-templated biopolymer scaffolds. The scaffolds within this study were at least 10mm in all dimensions, making them applicable to critical sized defects for biomedical applications. It was found that monitoring the local freezing behavior within the slurry was critical to predicting scaffold structure. Aligned porosity was produced only in parts of the slurry volume which were above the equilibrium freezing temperature (0°C) at the time when nucleation first occurs in the sample as a whole. Thus, to create anisotropic scaffolds, local slurry cooling rates must be sufficiently different to ensure that the equilibrium freezing temperature is not reached throughout the slurry at nucleation. This principal was valid over a range of collagen slurries, demonstrating that by monitoring the temperature within slurry during freezing, scaffold anisotropy with ice-templated scaffolds can be predicted. Copyright © 2014 Elsevier B.V. All rights reserved.

  18. Nonlinear viscoelasticity and generalized failure criterion for biopolymer gels

    NASA Astrophysics Data System (ADS)

    Divoux, Thibaut; Keshavarz, Bavand; Manneville, Sébastien; McKinley, Gareth

    2016-11-01

    Biopolymer gels display a multiscale microstructure that is responsible for their solid-like properties. Upon external deformation, these soft viscoelastic solids exhibit a generic nonlinear mechanical response characterized by pronounced stress- or strain-stiffening prior to irreversible damage and failure, most often through macroscopic fractures. Here we show on a model acid-induced protein gel that the nonlinear viscoelastic properties of the gel can be described in terms of a 'damping function' which predicts the gel mechanical response quantitatively up to the onset of macroscopic failure. Using a nonlinear integral constitutive equation built upon the experimentally-measured damping function in conjunction with power-law linear viscoelastic response, we derive the form of the stress growth in the gel following the start up of steady shear. We also couple the shear stress response with Bailey's durability criteria for brittle solids in order to predict the critical values of the stress σc and strain γc for failure of the gel, and how they scale with the applied shear rate. This provides a generalized failure criterion for biopolymer gels in a range of different deformation histories. This work was funded by the MIT-France seed fund and by the CNRS PICS-USA scheme (#36939). BK acknowledges financial support from Axalta Coating Systems.

  19. Fractional quantization of the magnetic flux in cylindrical unconventional superconductors.

    PubMed

    Loder, F; Kampf, A P; Kopp, T

    2013-07-26

    The magnetic flux threading a conventional superconducting ring is typically quantized in units of Φ0=hc/2e. The factor of 2 in the denominator of Φ0 originates from the existence of two different types of pairing states with minima of the free energy at even and odd multiples of Φ0. Here we show that spatially modulated pairing states exist with energy minima at fractional flux values, in particular, at multiples of Φ0/2. In such states, condensates with different center-of-mass momenta of the Cooper pairs coexist. The proposed mechanism for fractional flux quantization is discussed in the context of cuprate superconductors, where hc/4e flux periodicities were observed.

  20. Could essential oils enhance biopolymers performance for wound healing? A systematic review.

    PubMed

    Pérez-Recalde, Mercedes; Ruiz Arias, Ignacio E; Hermida, Élida B

    2018-01-01

    Millions of people in the world suffer from chronic wounds of different etiologies such as diabetic foot and leg ulcers, without solutions nowadays. Molecules obtained from plants offer an alternative to aid wound healing. Strong evidence about essential oils (EO) anti-inflammatory and antimicrobial properties is thoroughly described in literature and their chemical compositions are well characterized. More recently, EO effects in experimental wounds have begun to be analyzed. We aim to summarize the evidence of EO in experimental wounds, and the possibility of combining them with biopolymers commonly used in skin regeneration. Electronic databases such as ScienceDirect, PubMed and Scopus were used to search scientific contributions until March 2017, using relevant keywords. In a first step, literature focusing on EO and/or mono- or sesqui-terpenoids effects in rodent wounds was identified and summarized. In all cases, chemical structures and EO composition were detailed, as well as references to in vitro activities previously determined, e.g. antibacterial, antioxidant or anti-inflammatory. In a second step, scientific literature devoted to combine EO and biopolymers with the focus set on wound healing innovations, was collected and analyzed. Treatments with EO from species of genders Lavandula, Croton, Blumea, Eucalyptus, Pinus, Cymbopogon, Eucalyptus, Cedrus, Abies, Rosmarinus, Origanum, Salvia and Plectranthus, have shown positive results in rodent wounds. All of these EO were mainly composed by monoterpenoids-thymol, 1,8-cineole, linalool-or monoterpenes, as limonene or pinenes. Experimental wounds in rodents have shown faster closure rate, better collagen deposition and/or enhanced fibroblasts proliferation. In blends with biopolymers, several EO combined with chitosan, alginate, gelatin or collagen, were processed to give active films or nanofibers, with antioxidant, anti-inflammatory or antimicrobial activities. Curiously, all of these works were carried

  1. Applications of free-electron lasers to measurements of energy transfer in biopolymers and materials

    NASA Astrophysics Data System (ADS)

    Edwards, Glenn S.; Johnson, J. B.; Kozub, John A.; Tribble, Jerri A.; Wagner, Katrina

    1992-08-01

    Free-electron lasers (FELs) provide tunable, pulsed radiation in the infrared. Using the FEL as a pump beam, we are investigating the mechanisms for energy transfer between localized vibrational modes and between vibrational modes and lattice or phonon modes. Either a laser-Raman system or a Fourier transform infrared (FTIR) spectrometer will serve as the probe beam, with the attribute of placing the burden of detection on two conventional spectroscopic techniques that circumvent the limited response of infrared detectors. More specifically, the Raman effect inelastically shifts an exciting laser line, typically a visible frequency, by the energy of the vibrational mode; however, the shifted Raman lines also lie in the visible, allowing for detection with highly efficient visible detectors. With regards to FTIR spectroscopy, the multiplex advantage yields a distinct benefit for infrared detector response. Our group is investigating intramolecular and intermolecular energy transfer processes in both biopolymers and more traditional materials. For example, alkali halides contain a number of defect types that effectively transfer energy in an intermolecular process. Similarly, the functioning of biopolymers depends on efficient intramolecular energy transfer. Understanding these mechanisms will enhance our ability to modify biopolymers and materials with applications to biology, medecine, and materials science.

  2. Effects of Dietary Conjugated Linoleic Acid and Biopolymer Encapsulation on Lipid Metabolism in Mice

    PubMed Central

    Hur, Sun Jin; Kim, Doo Hwan; Chun, Se Chul; Lee, Si Kyung

    2013-01-01

    Forty mice were randomly divided into four groups on the basis of the diet to be fed as follows: 5% (low) fat diet (T1: LF); 20% (high) fat diet (T2: HF); 20% fat containing 1% conjugated linoleic acid (CLA) (T3: HFC); and 20% fat containing 1% CLA with 0.5% biopolymers (T4: HFCB). The high-fat with CLA diet groups (HFC and HFCB) and the low-fat diet group (LF) tended to have lower body weights and total adipose tissue weights than those of the high-fat diet group (HF). Serum leptin and triglyceride were significantly lower in the high fat with CLA-fed groups (HFC and HFCB) and the low-fat diet group (LF) than those in the high-fat diet group (HF). It is noteworthy that the high-fat with CLA and biopolymers group (HFCB) showed the lowest serum triglyceride and cholesterol concentrations. In the high-fat-fed group (HF), voluntary travel distance as a measure of physical activity decreased after three weeks of feeding. However, the CLA-fed groups showed increased physical activity. The groups fed high-fat diets supplemented with CLA alone and with CLA and biopolymers had higher viscosity of small intestinal contents than that in the low- and high-fat dietary groups. PMID:23531540

  3. Cascade Error Projection with Low Bit Weight Quantization for High Order Correlation Data

    NASA Technical Reports Server (NTRS)

    Duong, Tuan A.; Daud, Taher

    1998-01-01

    In this paper, we reinvestigate the solution for chaotic time series prediction problem using neural network approach. The nature of this problem is such that the data sequences are never repeated, but they are rather in chaotic region. However, these data sequences are correlated between past, present, and future data in high order. We use Cascade Error Projection (CEP) learning algorithm to capture the high order correlation between past and present data to predict a future data using limited weight quantization constraints. This will help to predict a future information that will provide us better estimation in time for intelligent control system. In our earlier work, it has been shown that CEP can sufficiently learn 5-8 bit parity problem with 4- or more bits, and color segmentation problem with 7- or more bits of weight quantization. In this paper, we demonstrate that chaotic time series can be learned and generalized well with as low as 4-bit weight quantization using round-off and truncation techniques. The results show that generalization feature will suffer less as more bit weight quantization is available and error surfaces with the round-off technique are more symmetric around zero than error surfaces with the truncation technique. This study suggests that CEP is an implementable learning technique for hardware consideration.

  4. [Bacterial translocation: gap in the shield].

    PubMed

    Rosero, Olivér; Kovács, Tibor; Onody, Péter; Harsányi, László; Szijártó, Attila

    2014-02-23

    The gastrointestinal tract is not only regarded as a system where nutrient absorption takes place, but also as a vital barrier against intraluminal pathogens entering the circulation and the maintenance of immune homeostasis. Bacterial translocation is defined as the penetration of viable bacteria or bacterial compounds from the gastrointestinal tract to extraintestinal sites. This disorder has been described in several clinical conditions. The main promoting factors for bacterial translocation have been proposed to be changes in the intestinal microflora, mucosal barrier failure and defects in host immunity. The presence of bacterial translocation has been associated with higher complications and mortality rates; therefore it should be taken into account in the therapeutic strategies of patients with predisposing factors.

  5. Wavelet/scalar quantization compression standard for fingerprint images

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Brislawn, C.M.

    1996-06-12

    US Federal Bureau of Investigation (FBI) has recently formulated a national standard for digitization and compression of gray-scale fingerprint images. Fingerprints are scanned at a spatial resolution of 500 dots per inch, with 8 bits of gray-scale resolution. The compression algorithm for the resulting digital images is based on adaptive uniform scalar quantization of a discrete wavelet transform subband decomposition (wavelet/scalar quantization method). The FBI standard produces archival-quality images at compression ratios of around 15 to 1 and will allow the current database of paper fingerprint cards to be replaced by digital imagery. The compression standard specifies a class ofmore » potential encoders and a universal decoder with sufficient generality to reconstruct compressed images produced by any compliant encoder, allowing flexibility for future improvements in encoder technology. A compliance testing program is also being implemented to ensure high standards of image quality and interchangeability of data between different implementations.« less

  6. Candida albicans-Induced Epithelial Damage Mediates Translocation through Intestinal Barriers

    PubMed Central

    2018-01-01

    ABSTRACT Life-threatening systemic infections often occur due to the translocation of pathogens across the gut barrier and into the bloodstream. While the microbial and host mechanisms permitting bacterial gut translocation are well characterized, these mechanisms are still unclear for fungal pathogens such as Candida albicans, a leading cause of nosocomial fungal bloodstream infections. In this study, we dissected the cellular mechanisms of translocation of C. albicans across intestinal epithelia in vitro and identified fungal genes associated with this process. We show that fungal translocation is a dynamic process initiated by invasion and followed by cellular damage and loss of epithelial integrity. A screen of >2,000 C. albicans deletion mutants identified genes required for cellular damage of and translocation across enterocytes. Correlation analysis suggests that hypha formation, barrier damage above a minimum threshold level, and a decreased epithelial integrity are required for efficient fungal translocation. Translocation occurs predominantly via a transcellular route, which is associated with fungus-induced necrotic epithelial damage, but not apoptotic cell death. The cytolytic peptide toxin of C. albicans, candidalysin, was found to be essential for damage of enterocytes and was a key factor in subsequent fungal translocation, suggesting that transcellular translocation of C. albicans through intestinal layers is mediated by candidalysin. However, fungal invasion and low-level translocation can also occur via non-transcellular routes in a candidalysin-independent manner. This is the first study showing translocation of a human-pathogenic fungus across the intestinal barrier being mediated by a peptide toxin. PMID:29871918

  7. Topological charge quantization via path integration: An application of the Kustaanheimo-Stiefel transformation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Inomata, A.; Junker, G.; Wilson, R.

    1993-08-01

    The unified treatment of the Dirac monopole, the Schwinger monopole, and the Aharonov-Bahn problem by Barut and Wilson is revisited via a path integral approach. The Kustaanheimo-Stiefel transformation of space and time is utilized to calculate the path integral for a charged particle in the singular vector potential. In the process of dimensional reduction, a topological charge quantization rule is derived, which contains Dirac's quantization condition as a special case. 32 refs.

  8. Quantization of geometric phase with integer and fractional topological characterization in a quantum Ising chain with long-range interaction.

    PubMed

    Sarkar, Sujit

    2018-04-12

    An attempt is made to study and understand the behavior of quantization of geometric phase of a quantum Ising chain with long range interaction. We show the existence of integer and fractional topological characterization for this model Hamiltonian with different quantization condition and also the different quantized value of geometric phase. The quantum critical lines behave differently from the perspective of topological characterization. The results of duality and its relation to the topological quantization is presented here. The symmetry study for this model Hamiltonian is also presented. Our results indicate that the Zak phase is not the proper physical parameter to describe the topological characterization of system with long range interaction. We also present quite a few exact solutions with physical explanation. Finally we present the relation between duality, symmetry and topological characterization. Our work provides a new perspective on topological quantization.

  9. Does translocation influence physiological stress in the desert tortoise?

    USGS Publications Warehouse

    Drake, K.K.; Nussear, K.E.; Esque, T.C.; Barber, A.M.; Vittum, K.M.; Medica, P.A.; Tracy, C.R.; Hunter, K.W.

    2012-01-01

    Wildlife translocation is increasingly used to mitigate disturbances to animals or habitat due to human activities, yet little is known about the extent to which translocating animals causes stress. To understand the relationship between physiological stress and translocation, we conducted a multiyear study (2007–2009) using a population of desert tortoises (Gopherus agassizii) near Fort Irwin, California. Blood samples were collected from adult tortoises in three treatment groups (resident, translocated and control) for 1 year prior to and 2 years after translocation. Samples were analyzed by radioimmunoassay for plasma total corticosterone (CORT), a glucocorticoid hormone commonly associated with stress responses in reptiles. CORT values were analyzed in relation to potential covariates (animal sex, date, behavior, treatment, handling time, air temperature, home-range size, precipitation and annual plant production) among seasons and years. CORT values in males were higher than in females, and values for both varied monthly throughout the activity season and among years. Year and sex were strong predictors of CORT, and translocation explained little in terms of CORT. Based on these results, we conclude that translocation does not elicit a physiological stress response in desert tortoises.

  10. Medical image compression based on vector quantization with variable block sizes in wavelet domain.

    PubMed

    Jiang, Huiyan; Ma, Zhiyuan; Hu, Yang; Yang, Benqiang; Zhang, Libo

    2012-01-01

    An optimized medical image compression algorithm based on wavelet transform and improved vector quantization is introduced. The goal of the proposed method is to maintain the diagnostic-related information of the medical image at a high compression ratio. Wavelet transformation was first applied to the image. For the lowest-frequency subband of wavelet coefficients, a lossless compression method was exploited; for each of the high-frequency subbands, an optimized vector quantization with variable block size was implemented. In the novel vector quantization method, local fractal dimension (LFD) was used to analyze the local complexity of each wavelet coefficients, subband. Then an optimal quadtree method was employed to partition each wavelet coefficients, subband into several sizes of subblocks. After that, a modified K-means approach which is based on energy function was used in the codebook training phase. At last, vector quantization coding was implemented in different types of sub-blocks. In order to verify the effectiveness of the proposed algorithm, JPEG, JPEG2000, and fractal coding approach were chosen as contrast algorithms. Experimental results show that the proposed method can improve the compression performance and can achieve a balance between the compression ratio and the image visual quality.

  11. Spectrally efficient digitized radio-over-fiber system with k-means clustering-based multidimensional quantization.

    PubMed

    Zhang, Lu; Pang, Xiaodan; Ozolins, Oskars; Udalcovs, Aleksejs; Popov, Sergei; Xiao, Shilin; Hu, Weisheng; Chen, Jiajia

    2018-04-01

    We propose a spectrally efficient digitized radio-over-fiber (D-RoF) system by grouping highly correlated neighboring samples of the analog signals into multidimensional vectors, where the k-means clustering algorithm is adopted for adaptive quantization. A 30  Gbit/s D-RoF system is experimentally demonstrated to validate the proposed scheme, reporting a carrier aggregation of up to 40 100 MHz orthogonal frequency division multiplexing (OFDM) channels with quadrate amplitude modulation (QAM) order of 4 and an aggregation of 10 100 MHz OFDM channels with a QAM order of 16384. The equivalent common public radio interface rates from 37 to 150  Gbit/s are supported. Besides, the error vector magnitude (EVM) of 8% is achieved with the number of quantization bits of 4, and the EVM can be further reduced to 1% by increasing the number of quantization bits to 7. Compared with conventional pulse coding modulation-based D-RoF systems, the proposed D-RoF system improves the signal-to-noise-ratio up to ∼9  dB and greatly reduces the EVM, given the same number of quantization bits.

  12. MOLECULAR TRACERS FOR SMOKE FROM CHARRING/BURNING OF CHITIN BIOPOLYMER. (R823990)

    EPA Science Inventory

    Abstract

    Monosaccharide derivatives from the breakdown of cellulose are the major organic components of smoke particles emitted to the atmosphere from biomass burning. In urban areas a related biopolymer, chitin, may contribute markers to smoke from grilling/charring o...

  13. A consistent covariant quantization of the Brink-Schwarz superparticle

    NASA Astrophysics Data System (ADS)

    Eisenberg, Yeshayahu

    1992-02-01

    We perform the covariant quantization of the ten-dimensional Brink-Schwarz superparticle by reducing it to a system whose constraints are all first class, covariant and have only two levels of reducibility. Research supported by the Rothschild Fellowship.

  14. Xp11.2 translocation renal cell carcinomas in young adults.

    PubMed

    Xu, Linfeng; Yang, Rong; Gan, Weidong; Chen, Xiancheng; Qiu, Xuefeng; Fu, Kai; Huang, Jin; Zhu, Guancheng; Guo, Hongqian

    2015-07-01

    Little is known about the biological behavior of Xp11.2 translocation renal cell carcinomas (RCCs) as few clinical studies have been performed using a large sample size. This study included 103 consecutive young adult patients (age ≤ 45 years) with RCC who underwent partial or radical nephrectomy at our institution from 2008 to 2013. Five patients without complete clinical data were excluded. Of the 98 remaining patients, 16 and 82 patients were included in the Xp11.2 translocation and non-Xp11.2 translocation groups, respectively. Clinicopathologic data were collected, including age, gender, tumor size, laterality, symptoms at diagnosis, surgical procedure, pathologic stage, tumor grade, time of recurrence and death. Xp11.2 translocation RCCs were associated with higher tumor grade and pathologic stage (P < 0.05, Fisher's exact test). During the median follow-up of 36 months (range: 3-71 months), the number of cancer-related deaths was 4 (4.9%) and 3 (18.7%) in the non-Xp11.2 translocation and Xp11.2 translocation groups, respectively. The Kaplan-Meier cancer specific survival curves revealed a significant difference between non-Xp11.2 translocation RCCs and Xp11.2 translocation RCCs in young adults (P = 0.042). Compared with non-Xp11.2 translocation RCCs, the Xp11.2 translocation RCCs seemingly showed a higher tumor grade and pathologic stage and have similar recurrence-free survival rates but poorer cancer-specific survival rates in young adults.

  15. Electrostatics of polymer translocation events in electrolyte solutions.

    PubMed

    Buyukdagli, Sahin; Ala-Nissila, T

    2016-07-07

    We develop an analytical theory that accounts for the image and surface charge interactions between a charged dielectric membrane and a DNA molecule translocating through the membrane. Translocation events through neutral carbon-based membranes are driven by a competition between the repulsive DNA-image-charge interactions and the attractive coupling between the DNA segments on the trans and the cis sides of the membrane. The latter effect is induced by the reduction of the coupling by the dielectric membrane. In strong salt solutions where the repulsive image-charge effects dominate the attractive trans-cis coupling, the DNA molecule encounters a translocation barrier of ≈10 kBT. In dilute electrolytes, the trans-cis coupling takes over image-charge forces and the membrane becomes a metastable attraction point that can trap translocating polymers over long time intervals. This mechanism can be used in translocation experiments in order to control DNA motion by tuning the salt concentration of the solution.

  16. Translocation and Endocytosis for Cell-penetrating Peptide Internalization

    PubMed Central

    Jiao, Chen-Yu; Delaroche, Diane; Burlina, Fabienne; Alves, Isabel D.; Chassaing, Gérard; Sagan, Sandrine

    2009-01-01

    Cell-penetrating peptides (CPPs) share the property of cellular internalization. The question of how these peptides reach the cytoplasm of cells is still widely debated. Herein, we have used a mass spectrometry-based method that enables quantification of internalized and membrane-bound peptides. Internalization of the most used CPP was studied at 37 °C (endocytosis and translocation) and 4 °C (translocation) in wild type and proteoglycan-deficient Chinese hamster ovary cells. Both translocation and endocytosis are internalization pathways used by CPP. The choice of one pathway versus the other depends on the peptide sequence (not the number of positive changes), the extracellular peptide concentration, and the membrane components. There is no relationship between the high affinity of these peptides for the cell membrane and their internalization efficacy. Translocation occurs at low extracellular peptide concentration, whereas endocytosis, a saturable and cooperative phenomenon, is activated at higher concentrations. Translocation operates in a narrow time window, which implies a specific lipid/peptide co-import in cells. PMID:19833724

  17. Novel properties of the q-analogue quantized radiation field

    NASA Technical Reports Server (NTRS)

    Nelson, Charles A.

    1993-01-01

    The 'classical limit' of the q-analog quantized radiation field is studied paralleling conventional quantum optics analyses. The q-generalizations of the phase operator of Susskind and Glogower and that of Pegg and Barnett are constructed. Both generalizations and their associated number-phase uncertainty relations are manifestly q-independent in the n greater than g number basis. However, in the q-coherent state z greater than q basis, the variance of the generic electric field, (delta(E))(sup 2) is found to be increased by a factor lambda(z) where lambda(z) greater than 1 if q not equal to 1. At large amplitudes, the amplitude itself would be quantized if the available resolution of unity for the q-analog coherent states is accepted in the formulation. These consequences are remarkable versus the conventional q = 1 limit.

  18. Can The Periods of Some Extra-Solar Planetary Systems be Quantized?

    NASA Astrophysics Data System (ADS)

    El Fady Morcos, Abd

    A simple formula was derived before by Morcos (2013 ), to relate the quantum numbers of planetary systems and their periods. This formula is applicable perfectly for the solar system planets, and some extra-solar planets , of stars of approximately the same masses like the Sun. This formula has been used to estimate the periods of some extra-solar planet of known quantum numbers. The used quantum numbers were calculated previously by other authors. A comparison between the observed and estimated periods, from the given formula has been done. The differences between the observed and calculated periods for the extra-solar systems have been calculated and tabulated. It is found that there is an error of the range of 10% The same formula has been also used to find the quantum numbers, of some known periods, exo-planet. Keywords: Quantization; Periods; Extra-Planetary; Extra-Solar Planet REFERENCES [1] Agnese, A. G. and Festa, R. “Discretization on the Cosmic Scale Inspirred from the Old Quantum Mechanics,” 1998. http://arxiv.org/abs/astro-ph/9807186 [2] Agnese, A. G. and Festa, R. “Discretizing ups-Andro- medae Planetary System,” 1999. http://arxiv.org/abs/astro-ph/9910534. [3] Barnothy, J. M. “The Stability of the Solar Systemand of Small Stellar Systems,” Proceedings of the IAU Sympo-sium 62, Warsaw, 5-8 September 1973, pp. 23-31. [4] Morcos, A.B. , “Confrontation between Quantized Periods of Some Extra-Solar Planetary Systems and Observations”, International Journal of Astronomy and Astrophysics, 2013, 3, 28-32. [5] Nottale, L. “Fractal Space-Time and Microphysics, To-wards a Theory of Scale Relativity,” World Scientific, London, 1994. [6] Nottale , L., “Scale-Relativity and Quantization of Extra- Solar Planetary Systems,” Astronomy & Astrophysics, Vol. 315, 1996, pp. L9-L12 [7] Nottale, L., Schumacher, G. and Gay, J. “Scale-Relativity and Quantization of the Solar Systems,” Astronomy & Astrophysics letters, Vol. 322, 1997, pp. 1018-10 [8

  19. JND measurements of the speech formants parameters and its implication in the LPC pole quantization

    NASA Astrophysics Data System (ADS)

    Orgad, Yaakov

    1988-08-01

    The inherent sensitivity of auditory perception is explicitly used with the objective of designing an efficient speech encoder. Speech can be modelled by a filter representing the vocal tract shape that is driven by an excitation signal representing glottal air flow. This work concentrates on the filter encoding problem, assuming that excitation signal encoding is optimal. Linear predictive coding (LPC) techniques were used to model a short speech segment by an all-pole filter; each pole was directly related to the speech formants. Measurements were made of the auditory just noticeable difference (JND) corresponding to the natural speech formants, with the LPC filter poles as the best candidates to represent the speech spectral envelope. The JND is the maximum precision required in speech quantization; it was defined on the basis of the shift of one pole parameter of a single frame of a speech segment, necessary to induce subjective perception of the distortion, with .75 probability. The average JND in LPC filter poles in natural speech was found to increase with increasing pole bandwidth and, to a lesser extent, frequency. The JND measurements showed a large spread of the residuals around the average values, indicating that inter-formant coupling and, perhaps, other, not yet fully understood, factors were not taken into account at this stage of the research. A future treatment should consider these factors. The average JNDs obtained in this work were used to design pole quantization tables for speech coding and provided a better bit-rate than the standard quantizer of reflection coefficient; a 30-bits-per-frame pole quantizer yielded a speech quality similar to that obtained with a standard 41-bits-per-frame reflection coefficient quantizer. Owing to the complexity of the numerical root extraction system, the practical implementation of the pole quantization approach remains to be proved.

  20. A gatekeeper chaperone complex directs translocator secretion during Type Three Secretion

    DOE PAGES

    Archuleta, Tara L.; Spiller, Benjamin W.; Kubori, Tomoko

    2014-11-06

    Many Gram-negative bacteria use Type Three Secretion Systems (T3SS) to deliver effector proteins into host cells. These protein delivery machines are composed of cytosolic components that recognize substrates and generate the force needed for translocation, the secretion conduit, formed by a needle complex and associated membrane spanning basal body, and translocators that form the pore in the target cell. A defined order of secretion in which needle component proteins are secreted first, followed by translocators, and finally effectors, is necessary for this system to be effective. While the secreted effectors vary significantly between organisms, the ~20 individual protein components thatmore » form the T3SS are conserved in many pathogenic bacteria. One such conserved protein, referred to as either a plug or gatekeeper, is necessary to prevent unregulated effector release and to allow efficient translocator secretion. The mechanism by which translocator secretion is promoted while effector release is inhibited by gatekeepers is unknown. We present the structure of the Chlamydial gatekeeper, CopN, bound to a translocator-specific chaperone. The structure identifies a previously unknown interface between gatekeepers and translocator chaperones and reveals that in the gatekeeper-chaperone complex the canonical translocator-binding groove is free to bind translocators. Thus, structure-based mutagenesis of the homologous complex in Shigella reveals that the gatekeeper-chaperone-translocator complex is essential for translocator secretion and for the ordered secretion of translocators prior to effectors.« less

  1. Within-Range Translocations and Their Consequences in European Larch

    PubMed Central

    Wagner, Stefanie; Liepelt, Sascha; Gerber, Sophie; Petit, Rémy J.

    2015-01-01

    In contrast to biological invasions, translocations of individuals within a species range are understudied, due to difficulties in systematically detecting them. This results in limited knowledge about the corresponding processes and uncertainties regarding the status of extant populations. European larch, a forest tree whose fragmented native distribution is restricted to the Alps and to other Central European mountains, has been massively planted for at least 300 years. Here we focus on the genetic characterization of translocations having taken place within its native range. Microsatellite variation at 13 nuclear loci and sequence data of two mitochondrial DNA fragments were analyzed on the basis of a comprehensive range-wide population sample. Two complementary methods (Geneclass and Structure) were used to infer translocation events based on nuclear data whereas mitochondrial data were used for validation of these inferences. Using Geneclass, we found translocation events in a majority of populations. Additional cases of translocation and many instances of admixture were identified using Structure, thanks to the clear-cut ancestral genetic structure detected in this species. In particular, a strong divide between Alpine and Central European populations, also apparent at mitochondrial markers, helped uncover details on translocation events and related processes. Translocations and associated admixture events were found to be heterogeneously distributed across the species range, with a particularly high frequency in Central Europe. Furthermore, translocations frequently involved multiple geographic sources, some of which were over-represented. Our study illustrates the importance of range-wide investigations for tracing translocations back to their origins and for revealing some of their consequences. It provides some first clues for developing suitable conservation and management strategies. PMID:26000791

  2. Reaction Event Counting Statistics of Biopolymer Reaction Systems with Dynamic Heterogeneity.

    PubMed

    Lim, Yu Rim; Park, Seong Jun; Park, Bo Jung; Cao, Jianshu; Silbey, Robert J; Sung, Jaeyoung

    2012-04-10

    We investigate the reaction event counting statistics (RECS) of an elementary biopolymer reaction in which the rate coefficient is dependent on states of the biopolymer and the surrounding environment and discover a universal kinetic phase transition in the RECS of the reaction system with dynamic heterogeneity. From an exact analysis for a general model of elementary biopolymer reactions, we find that the variance in the number of reaction events is dependent on the square of the mean number of the reaction events when the size of measurement time is small on the relaxation time scale of rate coefficient fluctuations, which does not conform to renewal statistics. On the other hand, when the size of the measurement time interval is much greater than the relaxation time of rate coefficient fluctuations, the variance becomes linearly proportional to the mean reaction number in accordance with renewal statistics. Gillespie's stochastic simulation method is generalized for the reaction system with a rate coefficient fluctuation. The simulation results confirm the correctness of the analytic results for the time dependent mean and variance of the reaction event number distribution. On the basis of the obtained results, we propose a method of quantitative analysis for the reaction event counting statistics of reaction systems with rate coefficient fluctuations, which enables one to extract information about the magnitude and the relaxation times of the fluctuating reaction rate coefficient, without a bias that can be introduced by assuming a particular kinetic model of conformational dynamics and the conformation dependent reactivity. An exact relationship is established between a higher moment of the reaction event number distribution and the multitime correlation of the reaction rate for the reaction system with a nonequilibrium initial state distribution as well as for the system with the equilibrium initial state distribution.

  3. Quantization error of CCD cameras and their influence on phase calculation in fringe pattern analysis.

    PubMed

    Skydan, Oleksandr A; Lilley, Francis; Lalor, Michael J; Burton, David R

    2003-09-10

    We present an investigation into the phase errors that occur in fringe pattern analysis that are caused by quantization effects. When acquisition devices with a limited value of camera bit depth are used, there are a limited number of quantization levels available to record the signal. This may adversely affect the recorded signal and adds a potential source of instrumental error to the measurement system. Quantization effects also determine the accuracy that may be achieved by acquisition devices in a measurement system. We used the Fourier fringe analysis measurement technique. However, the principles can be applied equally well for other phase measuring techniques to yield a phase error distribution that is caused by the camera bit depth.

  4. Application of biopolymers for improving the glass transition temperature of hairtail fish meat.

    PubMed

    Yu, Haixia; Yang, Shuibing; Yuan, Chunhong; Hu, Qinglan; Li, Yuan; Chen, Shiguo; Hu, Yaqin

    2018-03-01

    Glass transition temperature (T g ) and food moisture content are closely related, especially in foods with a high moisture content, such as surimi products. In order to improve storage condition and maintain food quality, the influence of six biopolymers on the T g of hairtail fish meat paste was investigated by differential scanning colorimetry. Samples were stored at -8 °C (>T g ), -14 °C (T g ) and -18 °C (biopolymers could effectively restrain the increase in TVC and TVB-N, as well as the dropping of gel strength and whiteness of fish meat paste during storage. A mixture of the biopolymers could improve T g and showed great potential in the preservation of hairtail meat products. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  5. Effect of temperature degeneracy and Landau quantization on drift solitary waves and double layers

    NASA Astrophysics Data System (ADS)

    Shan, Shaukat Ali; Haque, Q.

    2018-01-01

    The linear and nonlinear drift ion acoustic waves have been investigated in an inhomogeneous, magnetized, dense degenerate, and quantized magnetic field plasma. The linear drift ion acoustic wave propagation along with the nonlinear structures like double layers and solitary waves has been found to be strongly dependent on the drift speed, magnetic field quantization parameter β, and the temperature degeneracy. The graphical illustrations show that the frequency of linear waves and the amplitude of the solitary waves increase with the increase in temperature degeneracy and Landau quantization effect, while the amplitude of the double layers decreases with the increase in η and T. The relevance of the present study is pointed out in the plasma environment of fast ignition inertial confinement fusion, the white dwarf stars, and short pulsed petawatt laser technology.

  6. Slowing DNA Translocation in a Nanofluidic Field-Effect Transistor.

    PubMed

    Liu, Yifan; Yobas, Levent

    2016-04-26

    Here, we present an experimental demonstration of slowing DNA translocation across a nanochannel by modulating the channel surface charge through an externally applied gate bias. The experiments were performed on a nanofluidic field-effect transistor, which is a monolithic integrated platform featuring a 50 nm-diameter in-plane alumina nanocapillary whose entire length is surrounded by a gate electrode. The field-effect transistor behavior was validated on the gating of ionic conductance and protein transport. The gating of DNA translocation was subsequently studied by measuring discrete current dips associated with single λ-DNA translocation events under a source-to-drain bias of 1 V. The translocation speeds under various gate bias conditions were extracted by fitting event histograms of the measured translocation time to the first passage time distributions obtained from a simple 1D biased diffusion model. A positive gate bias was observed to slow the translocation of single λ-DNA chains markedly; the translocation speed was reduced by an order of magnitude from 18.4 mm/s obtained under a floating gate down to 1.33 mm/s under a positive gate bias of 9 V. Therefore, a dynamic and flexible regulation of the DNA translocation speed, which is vital for single-molecule sequencing, can be achieved on this device by simply tuning the gate bias. The device is realized in a conventional semiconductor microfabrication process without the requirement of advanced lithography, and can be potentially further developed into a compact electronic single-molecule sequencer.

  7. Interaction between polymer constituents and the structure of biopolymers

    NASA Technical Reports Server (NTRS)

    Rein, R.

    1974-01-01

    The paper reviews the current status of methods for calculating intermolecular interactions between biopolymer units. The nature of forces contributing to the various domains of intermolecular separations is investigated, and various approximations applicable in the respective regions are examined. The predictive value of current theory is tested by establishing a connection with macroscopic properties and comparing the theoretical predicted values with those derived from experimental data. This has led to the introduction of a statistical model describing DNA.

  8. Xp11.2 translocation renal cell carcinoma.

    PubMed

    Armah, Henry B; Parwani, Anil V

    2010-01-01

    Xp11.2 translocation renal cell carcinomas (RCCs), a recently recognized distinct subtype, are rare tumors predominantly reported in young patients. They comprise at least one-third of pediatric RCCs, and only few adult cases have been reported. They are characterized by various translocations involving chromosome Xp11.2, all resulting in gene fusions involving the transcription factor E3 (TFE3) gene. In recent years, at least 6 different Xp11.2 translocation RCCs have been identified and characterized at the molecular level. These include a distinctive RCC that bears a translocation with the identical chromosomal breakpoints (Xp11.2, 17q25) and identical resulting ASPL-TFE3 gene fusion as alveolar soft part sarcoma. They typically have papillary or nested architecture and are composed of cells with voluminous, clear, or eosinophilic cytoplasm. Their most distinctive immunohistochemical feature is nuclear labeling for TFE3 protein. Although only limited data are available so far, they are believed to be rather indolent, but there have been increasing, recent reports of an aggressive clinical course in adult cases. The consistent immunohistochemical staining for TFE3 in all RCC with unusual histology, regardless of patient age, is likely to expand the spectrum of Xp11.2 translocation RCC with respect to age, clinical behavior, and molecular abnormalities.

  9. A constrained joint source/channel coder design and vector quantization of nonstationary sources

    NASA Technical Reports Server (NTRS)

    Sayood, Khalid; Chen, Y. C.; Nori, S.; Araj, A.

    1993-01-01

    The emergence of broadband ISDN as the network for the future brings with it the promise of integration of all proposed services in a flexible environment. In order to achieve this flexibility, asynchronous transfer mode (ATM) has been proposed as the transfer technique. During this period a study was conducted on the bridging of network transmission performance and video coding. The successful transmission of variable bit rate video over ATM networks relies on the interaction between the video coding algorithm and the ATM networks. Two aspects of networks that determine the efficiency of video transmission are the resource allocation algorithm and the congestion control algorithm. These are explained in this report. Vector quantization (VQ) is one of the more popular compression techniques to appear in the last twenty years. Numerous compression techniques, which incorporate VQ, have been proposed. While the LBG VQ provides excellent compression, there are also several drawbacks to the use of the LBG quantizers including search complexity and memory requirements, and a mismatch between the codebook and the inputs. The latter mainly stems from the fact that the VQ is generally designed for a specific rate and a specific class of inputs. In this work, an adaptive technique is proposed for vector quantization of images and video sequences. This technique is an extension of the recursively indexed scalar quantization (RISQ) algorithm.

  10. Equilibrium & Nonequilibrium Fluctuation Effects in Biopolymer Networks

    NASA Astrophysics Data System (ADS)

    Kachan, Devin Michael

    Fluctuation-induced interactions are an important organizing principle in a variety of soft matter systems. In this dissertation, I explore the role of both thermal and active fluctuations within cross-linked polymer networks. The systems I study are in large part inspired by the amazing physics found within the cytoskeleton of eukaryotic cells. I first predict and verify the existence of a thermal Casimir force between cross-linkers bound to a semi-flexible polymer. The calculation is complicated by the appearance of second order derivatives in the bending Hamiltonian for such polymers, which requires a careful evaluation of the the path integral formulation of the partition function in order to arrive at the physically correct continuum limit and properly address ultraviolet divergences. I find that cross linkers interact along a filament with an attractive logarithmic potential proportional to thermal energy. The proportionality constant depends on whether and how the cross linkers constrain the relative angle between the two filaments to which they are bound. The interaction has important implications for the synthesis of biopolymer bundles within cells. I model the cross-linkers as existing in two phases: bound to the bundle and free in solution. When the cross-linkers are bound, they behave as a one-dimensional gas of particles interacting with the Casimir force, while the free phase is a simple ideal gas. Demanding equilibrium between the two phases, I find a discontinuous transition between a sparsely and a densely bound bundle. This discontinuous condensation transition induced by the long-ranged nature of the Casimir interaction allows for a similarly abrupt structural transition in semiflexible filament networks between a low cross linker density isotropic phase and a higher cross link density bundle network. This work is supported by the results of finite element Brownian dynamics simulations of semiflexible filaments and transient cross-linkers. I

  11. Translocation pathways for inhaled asbestos fibers

    PubMed Central

    Miserocchi, G; Sancini, G; Mantegazza, F; Chiappino, Gerolamo

    2008-01-01

    We discuss the translocation of inhaled asbestos fibers based on pulmonary and pleuro-pulmonary interstitial fluid dynamics. Fibers can pass the alveolar barrier and reach the lung interstitium via the paracellular route down a mass water flow due to combined osmotic (active Na+ absorption) and hydraulic (interstitial pressure is subatmospheric) pressure gradient. Fibers can be dragged from the lung interstitium by pulmonary lymph flow (primary translocation) wherefrom they can reach the blood stream and subsequently distribute to the whole body (secondary translocation). Primary translocation across the visceral pleura and towards pulmonary capillaries may also occur if the asbestos-induced lung inflammation increases pulmonary interstitial pressure so as to reverse the trans-mesothelial and trans-endothelial pressure gradients. Secondary translocation to the pleural space may occur via the physiological route of pleural fluid formation across the parietal pleura; fibers accumulation in parietal pleura stomata (black spots) reflects the role of parietal lymphatics in draining pleural fluid. Asbestos fibers are found in all organs of subjects either occupationally exposed or not exposed to asbestos. Fibers concentration correlates with specific conditions of interstitial fluid dynamics, in line with the notion that in all organs microvascular filtration occurs from capillaries to the extravascular spaces. Concentration is high in the kidney (reflecting high perfusion pressure and flow) and in the liver (reflecting high microvascular permeability) while it is relatively low in the brain (due to low permeability of blood-brain barrier). Ultrafine fibers (length < 5 μm, diameter < 0.25 μm) can travel larger distances due to low steric hindrance (in mesothelioma about 90% of fibers are ultrafine). Fibers translocation is a slow process developing over decades of life: it is aided by high biopersistence, by inflammation-induced increase in permeability, by low steric

  12. Single walled carbon nanotubes functionally adsorbed to biopolymers for use as chemical sensors

    DOEpatents

    Johnson, Jr., Alan T.; Gelperin, Alan [Princeton, NJ; Staii, Cristian [Madison, WI

    2011-07-12

    Chemical field effect sensors comprising nanotube field effect devices having biopolymers such as single stranded DNA functionally adsorbed to the nanotubes are provided. Also included are arrays comprising the sensors and methods of using the devices to detect volatile compounds.

  13. Electronic quantization in dielectric nanolaminates

    NASA Astrophysics Data System (ADS)

    Willemsen, T.; Geerke, P.; Jupé, M.; Gallais, L.; Ristau, D.

    2016-12-01

    The scientific background in the field of the laser induced damage processes in optical coatings has been significantly extended during the last decades. Especially for the ultra-short pulse regime a clear correlation between the electronic material parameters and the laser damage threshold could be demonstrated. In the present study, the quantization in nanolaminates is investigated to gain a deeper insight into the behavior of the blue shift of the bandgap in specific coating materials as well as to find approximations for the effective mass of the electrons. The theoretical predictions are correlated to the measurements.

  14. Generalized Ehrenfest Relations, Deformation Quantization, and the Geometry of Inter-model Reduction

    NASA Astrophysics Data System (ADS)

    Rosaler, Joshua

    2018-03-01

    This study attempts to spell out more explicitly than has been done previously the connection between two types of formal correspondence that arise in the study of quantum-classical relations: one the one hand, deformation quantization and the associated continuity between quantum and classical algebras of observables in the limit \\hbar → 0, and, on the other, a certain generalization of Ehrenfest's Theorem and the result that expectation values of position and momentum evolve approximately classically for narrow wave packet states. While deformation quantization establishes a direct continuity between the abstract algebras of quantum and classical observables, the latter result makes in-eliminable reference to the quantum and classical state spaces on which these structures act—specifically, via restriction to narrow wave packet states. Here, we describe a certain geometrical re-formulation and extension of the result that expectation values evolve approximately classically for narrow wave packet states, which relies essentially on the postulates of deformation quantization, but describes a relationship between the actions of quantum and classical algebras and groups over their respective state spaces that is non-trivially distinct from deformation quantization. The goals of the discussion are partly pedagogical in that it aims to provide a clear, explicit synthesis of known results; however, the particular synthesis offered aspires to some novelty in its emphasis on a certain general type of mathematical and physical relationship between the state spaces of different models that represent the same physical system, and in the explicitness with which it details the above-mentioned connection between quantum and classical models.

  15. Polymer quantization, stability and higher-order time derivative terms

    NASA Astrophysics Data System (ADS)

    Cumsille, Patricio; Reyes, Carlos M.; Ossandon, Sebastian; Reyes, Camilo

    2016-03-01

    The possibility that fundamental discreteness implicit in a quantum gravity theory may act as a natural regulator for ultraviolet singularities arising in quantum field theory has been intensively studied. Here, along the same expectations, we investigate whether a nonstandard representation called polymer representation can smooth away the large amount of negative energy that afflicts the Hamiltonians of higher-order time derivative theories, rendering the theory unstable when interactions come into play. We focus on the fourth-order Pais-Uhlenbeck model which can be reexpressed as the sum of two decoupled harmonic oscillators one producing positive energy and the other negative energy. As expected, the Schrödinger quantization of such model leads to the stability problem or to negative norm states called ghosts. Within the framework of polymer quantization we show the existence of new regions where the Hamiltonian can be defined well bounded from below.

  16. Terrestrial plant biopolymers in marine sediments

    NASA Astrophysics Data System (ADS)

    Gough, Mark A.; Fauzi, R.; Mantoura, C.; Preston, Martin

    1993-03-01

    The vascular land plant biopolymers lignin and cutin were surveyed in the surface sediments of coastal and open ocean waters by controlled alkaline CuO oxidation/reaction. Two contrasting oceanic regimes were studied: the northwest Mediterranean (NWM) Sea, which receives significant particulate terrigenous debris through riverine discharge; and the northeast Atlantic (NEA) Ocean, with poorly characterised terrestrial carbon inputs. In the NWM products of lignin and cutin co-occurred at all stations, elevated levels (ca. 0.5-3.0 mg lignin phenols/100 mg organic carbon; ca. 0.01-0.09 mg cutin acids/100 mg organic carbon) were observed for near-shore deltaic and shelf sediments. The influence of terrestrial land plant inputs extended across the shelf and through the slope to the abyssal plain, providing molecular evidence for advective offshore transfer of terrestrial carbon. Mass balance estimates for the basin suggest riverine inputs account for the majority of surface sedimentary lignin/cutin, most of which (>90%) is deposited on the shelf. Products of CuO oxidation of lignin and cutin were also detected in NEA surface sediments, at levels comparable to those observed for the NWM continental slope, and were detectable at low concentrations ( ca. 0.5 μgg-1 in the sediments of the abyssal plains (>4,000 m depth). While atmospheric deposition of lignin/cutin-derived material cannot be discounted in this open ocean system, lateral advective transfer of enriched shelf sediments is inferred as a possible transport process. A progressive enrichment in cutin-derived material relative to lignin was observed offshore, with evidence of an increase in the degree of oxidative alteration of lignin residues. To account for these observations, preferential offshore transport of finer and more degraded material is proposed. Nonspecific oxidation products dominated the gas chromatograms of NEA sediments, which appear to originate from marine sources of sedimentary organic carbon

  17. Structurally colored biopolymer thin films for detection of dissolved metal ions in aqueous solution

    NASA Astrophysics Data System (ADS)

    Cathell, Matthew David

    Natural polymers, such as the polysaccharides alginate and chitosan, are noted sorbents of heavy metals. Their polymer backbone structures are rich in ligands that can interact with metal ions through chelation, electrostatics, ion exchange and nonspecific mechanisms. These water-soluble biopolymer materials can be processed into hydrogel thin films, creating high surface area interfaces ideal for binding and sequestering metal ions from solution. By virtue of their uniform nanoscale dimensions (with thicknesses smaller than wavelengths of visible light) polymer thin films exhibit structure-based coloration. This phenomenon, frequently observed in nature, causes the transparent and essentially colorless films to reflect light in a wide array of colors. The lamellar film structures act as one-dimensional photonic crystals, allowing selective reflection of certain wavelengths of light while minimizing other wavelengths by out-of-phase interference. The combination of metal-binding and reflective properties make alginate and chitosan thin films attractive candidates for analyte sensing. Interactions with metal ions can induce changes in film thicknesses and refractive indices, thus altering the path of light reflected through the film. Small changes in dimensional or optical properties can lead to shifts in film color that are perceivable by the unaided eye. These thin films offer the potential for optical sensing of toxic dissolved materials without the need for instrumentation, external power or scientific expertise. With the use of a spectroscopic ellipsometer and a fiber optic reflectance spectrometer, the physical and optical characteristics of biopolymer thin films have been characterized in response to 50 ppm metal ion solutions. It has been determined that metal interactions can lead to measurable changes in both film thicknesses and effective refractive indices. The intrinsic response behaviors of alginate and chitosan, as well as the responses of modified

  18. Medical Image Compression Based on Vector Quantization with Variable Block Sizes in Wavelet Domain

    PubMed Central

    Jiang, Huiyan; Ma, Zhiyuan; Hu, Yang; Yang, Benqiang; Zhang, Libo

    2012-01-01

    An optimized medical image compression algorithm based on wavelet transform and improved vector quantization is introduced. The goal of the proposed method is to maintain the diagnostic-related information of the medical image at a high compression ratio. Wavelet transformation was first applied to the image. For the lowest-frequency subband of wavelet coefficients, a lossless compression method was exploited; for each of the high-frequency subbands, an optimized vector quantization with variable block size was implemented. In the novel vector quantization method, local fractal dimension (LFD) was used to analyze the local complexity of each wavelet coefficients, subband. Then an optimal quadtree method was employed to partition each wavelet coefficients, subband into several sizes of subblocks. After that, a modified K-means approach which is based on energy function was used in the codebook training phase. At last, vector quantization coding was implemented in different types of sub-blocks. In order to verify the effectiveness of the proposed algorithm, JPEG, JPEG2000, and fractal coding approach were chosen as contrast algorithms. Experimental results show that the proposed method can improve the compression performance and can achieve a balance between the compression ratio and the image visual quality. PMID:23049544

  19. Chromosomal Translocations: Chicken or Egg? | Center for Cancer Research

    Cancer.gov

    Many tumor cells have abnormal chromosomes. Some of these abnormalities are caused by chromosomal translocations, which occur when two chromosomes break and incorrectly rejoin, resulting in an exchange of genetic material. Translocations can activate oncogenes, silence tumor suppressor genes, or result in the creation of completely new fusion gene products. While there is little doubt that chromosomal translocations can contribute to cancer, there is an active "chicken and the egg" discussion about the role translocations and other chromosomal abnormalities play—do they actually cause cancer or merely occur because of other changes within the cancer cell.  

  20. Distributed Adaptive Containment Control for a Class of Nonlinear Multiagent Systems With Input Quantization.

    PubMed

    Wang, Chenliang; Wen, Changyun; Hu, Qinglei; Wang, Wei; Zhang, Xiuyu

    2018-06-01

    This paper is devoted to distributed adaptive containment control for a class of nonlinear multiagent systems with input quantization. By employing a matrix factorization and a novel matrix normalization technique, some assumptions involving control gain matrices in existing results are relaxed. By fusing the techniques of sliding mode control and backstepping control, a two-step design method is proposed to construct controllers and, with the aid of neural networks, all system nonlinearities are allowed to be unknown. Moreover, a linear time-varying model and a similarity transformation are introduced to circumvent the obstacle brought by quantization, and the controllers need no information about the quantizer parameters. The proposed scheme is able to ensure the boundedness of all closed-loop signals and steer the containment errors into an arbitrarily small residual set. The simulation results illustrate the effectiveness of the scheme.

  1. Direct Images, Fields of Hilbert Spaces, and Geometric Quantization

    NASA Astrophysics Data System (ADS)

    Lempert, László; Szőke, Róbert

    2014-04-01

    Geometric quantization often produces not one Hilbert space to represent the quantum states of a classical system but a whole family H s of Hilbert spaces, and the question arises if the spaces H s are canonically isomorphic. Axelrod et al. (J. Diff. Geo. 33:787-902, 1991) and Hitchin (Commun. Math. Phys. 131:347-380, 1990) suggest viewing H s as fibers of a Hilbert bundle H, introduce a connection on H, and use parallel transport to identify different fibers. Here we explore to what extent this can be done. First we introduce the notion of smooth and analytic fields of Hilbert spaces, and prove that if an analytic field over a simply connected base is flat, then it corresponds to a Hermitian Hilbert bundle with a flat connection and path independent parallel transport. Second we address a general direct image problem in complex geometry: pushing forward a Hermitian holomorphic vector bundle along a non-proper map . We give criteria for the direct image to be a smooth field of Hilbert spaces. Third we consider quantizing an analytic Riemannian manifold M by endowing TM with the family of adapted Kähler structures from Lempert and Szőke (Bull. Lond. Math. Soc. 44:367-374, 2012). This leads to a direct image problem. When M is homogeneous, we prove the direct image is an analytic field of Hilbert spaces. For certain such M—but not all—the direct image is even flat; which means that in those cases quantization is unique.

  2. Biopolymer-based structuring of liquid oil into soft solids and oleogels using water-continuous emulsions as templates.

    PubMed

    Patel, Ashok R; Rajarethinem, Pravin S; Cludts, Nick; Lewille, Benny; De Vos, Winnok H; Lesaffer, Ans; Dewettinck, Koen

    2015-02-24

    Physical trapping of a hydrophobic liquid oil in a matrix of water-soluble biopolymers was achieved using a facile two-step process by first formulating a surfactant-free oil-in-water emulsion stabilized by biopolymers (a protein and a polysaccharide) followed by complete removal of the water phase (by either high- or low-temperature drying of the emulsion) resulting in structured solid systems containing a high concentration of liquid oil (above 97 wt %). The microstructure of these systems was revealed by confocal and cryo-scanning electron microscopy, and the effect of biopolymer concentrations on the consistency of emulsions as well as the dried product was evaluated using a combination of small-amplitude oscillatory shear rheometry and large deformation fracture studies. The oleogel prepared by shearing the dried product showed a high gel strength as well as a certain degree of thixotropic recovery even at high temperatures. Moreover, the reversibility of the process was demonstrated by shearing the dried product in the presence of water to obtain reconstituted emulsions with rheological properties comparable to those of the fresh emulsion.

  3. The Effects of Biopolymers Composite Based Waste Cooking Oil and Titanium Dioxide Fillers as Superhydrophobic Coatings.

    NASA Astrophysics Data System (ADS)

    Marsi, N.; Rus, A. Z. M.

    2017-08-01

    This project presents the effect of biopolymer composite surface coating on TiO2 fillers by analysing the static water contact angle, SEM micrographs, porosity, density and refractive index of biopolymer doped with different loading of TiO2. The different ratio loading of 0.5, 1.0, 1.5, 2.0 and 2.5 (wt/wt%) TiO2 can be used to improve the material properties in practical use for outdoor application especially to enhance the stability of surface coating. It is found that the smooth surfaces with a low ratio loading of TiO2 fillers on biopolymer composite surface coating increases the static water contact angle up to 162.29°. It is interpreted with respect to nano- features existing on the surface of the water repellent creates a thin superhydrphobic layer. The relationship between porosity and density is indirectly proportional where the higher the loading of TiO2 filler produce the lower porosity up to 0.86% of the surface coating. The movement from shorter to longer of wavelength was observed before and after exposure indicates that there are optimization of absorption of UV-B radiation as the amount of delocalisation.

  4. Strong, Thermally Superinsulating Biopolymer-Silica Aerogel Hybrids by Cogelation of Silicic Acid with Pectin.

    PubMed

    Zhao, Shanyu; Malfait, Wim J; Demilecamps, Arnaud; Zhang, Yucheng; Brunner, Samuel; Huber, Lukas; Tingaut, Philippe; Rigacci, Arnaud; Budtova, Tatiana; Koebel, Matthias M

    2015-11-23

    Silica aerogels are excellent thermal insulators, but their brittle nature has prevented widespread application. To overcome these mechanical limitations, silica-biopolymer hybrids are a promising alternative. A one-pot process to monolithic, superinsulating pectin-silica hybrid aerogels is presented. Their structural and physical properties can be tuned by adjusting the gelation pH and pectin concentration. Hybrid aerogels made at pH 1.5 exhibit minimal dust release and vastly improved mechanical properties while remaining excellent thermal insulators. The change in the mechanical properties is directly linked to the observed "neck-free" nanoscale network structure with thicker struts. Such a design is superior to "neck-limited", classical inorganic aerogels. This new class of materials opens up new perspectives for novel silica-biopolymer nanocomposite aerogels. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  5. Role of Native and Exotic Earthworms in Plant Biopolymer Dynamics in Forest Soil

    NASA Astrophysics Data System (ADS)

    Filley, Timothy

    2010-05-01

    Many forests within northern North America are experiencing the introduction of earthworms for the first time, presumably since before the last major glaciation. Forest dynamics are undergoing substantial changes because of the activity of the mainly European lumbricid species. Documented losses in litter layers, expansion of A-horizons, loss of the organic horizon, changes in fine root density, and shifts in microbial populations have all been documented in invaded zones. Two free air CO2 enrichment (FACE) forest experiments (aspen FACE at Rhinelander, Wisconsin and sweet gum FACE at Oak Ridge National Lab, Tennessee) lie within the zones of invasion and exhibit differences in amounts of exotic and native species as well as endogeic (predominantly mineral soil dwelling) and epigeic (litter and organic matter horizon dwelling) types. Considerations of carbon accrual dynamics and relative input of above vs. below ground plant input in these young successional systems do not consider the potential impact of these ecosystem engineers. We investigated the impact of earthworm activity by tracking the relative abundance and stable carbon isotope compositions of lignin and substituted fatty acids extracted from isolated earthworms and their fecal pellets and from host soils. Indications of root vs leaf input to earthworm casts and fecal matter were derived from differences in the chemical composition of cutin, suberin, and lignin. The isotopically depleted CO2 used in FACE and the resulting isotopically depleted plant organic matter afford an excellent opportunity to assess biopolymer-specific turnover dynamics. We find that endogeic species are proportionately more responsible for fine root cycling while some epigeic species are responsible for microaggregation of foliar cutin. CSIA of fecal pellet lignin and SFA indicates how these biopolymer pools can be derived from variable sources, roots, background soil, foliar tissue within one earthworm. Additionally, CSIA

  6. Quantizing higher-spin gravity in free-field variables

    NASA Astrophysics Data System (ADS)

    Campoleoni, Andrea; Fredenhagen, Stefan; Raeymaekers, Joris

    2018-02-01

    We study the formulation of massless higher-spin gravity on AdS3 in a gauge in which the fundamental variables satisfy free field Poisson brackets. This gauge choice leaves a small portion of the gauge freedom unfixed, which should be further quotiented out. We show that doing so leads to a bulk version of the Coulomb gas formalism for W N CFT's: the generators of the residual gauge symmetries are the classical limits of screening charges, while the gauge-invariant observables are classical W N charges. Quantization in these variables can be carried out using standard techniques and makes manifest a remnant of the triality symmetry of W ∞[λ]. This symmetry can be used to argue that the theory should be supplemented with additional matter content which is precisely that of the Prokushkin-Vasiliev theory. As a further application, we use our formulation to quantize a class of conical surplus solutions and confirm the conjecture that these are dual to specific degenerate W N primaries, to all orders in the large central charge expansion.

  7. Rotating effects on the Landau quantization for an atom with a magnetic quadrupole moment

    NASA Astrophysics Data System (ADS)

    Fonseca, I. C.; Bakke, K.

    2016-01-01

    Based on the single particle approximation [Dmitriev et al., Phys. Rev. C 50, 2358 (1994) and C.-C. Chen, Phys. Rev. A 51, 2611 (1995)], the Landau quantization associated with an atom with a magnetic quadrupole moment is introduced, and then, rotating effects on this analogue of the Landau quantization is investigated. It is shown that rotating effects can modify the cyclotron frequency and breaks the degeneracy of the analogue of the Landau levels.

  8. Rotating effects on the Landau quantization for an atom with a magnetic quadrupole moment

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fonseca, I. C.; Bakke, K., E-mail: kbakke@fisica.ufpb.br

    2016-01-07

    Based on the single particle approximation [Dmitriev et al., Phys. Rev. C 50, 2358 (1994) and C.-C. Chen, Phys. Rev. A 51, 2611 (1995)], the Landau quantization associated with an atom with a magnetic quadrupole moment is introduced, and then, rotating effects on this analogue of the Landau quantization is investigated. It is shown that rotating effects can modify the cyclotron frequency and breaks the degeneracy of the analogue of the Landau levels.

  9. Correspondence between quantization schemes for two-player nonzero-sum games and CNOT complexity

    NASA Astrophysics Data System (ADS)

    Vijayakrishnan, V.; Balakrishnan, S.

    2018-05-01

    The well-known quantization schemes for two-player nonzero-sum games are Eisert-Wilkens-Lewenstein scheme and Marinatto-Weber scheme. In this work, we establish the connection between the two schemes from the perspective of quantum circuits. Further, we provide the correspondence between any game quantization schemes and the CNOT complexity, where CNOT complexity is up to the local unitary operations. While CNOT complexity is known to be useful in the analysis of universal quantum circuit, in this work, we find its applicability in quantum game theory.

  10. Single walled carbon nanotubes with functionally adsorbed biopolymers for use as chemical sensors

    DOEpatents

    Johnson, Jr., Alan T

    2013-12-17

    Chemical field effect sensors comprising nanotube field effect devices having biopolymers such as single stranded DNA or RNA functionally adsorbed to the nanotubes are provided. Also included are arrays comprising the sensors and methods of using the devices to detect volatile compounds.

  11. Load sharing in the growth of bundled biopolymers

    PubMed Central

    Wang, Ruizhe; Carlsson, A. E.

    2014-01-01

    To elucidate the nature of load sharing in the growth of multiple biopolymers, we perform stochastic simulations of the growth of biopolymer bundles against obstacles under a broad range of conditions and varying assumptions. The obstacle motion due to thermal fluctuations is treated explicitly. We assume the “Perfect Brownian Ratchet” (PBR) model, in which the polymerization rate equals the free-filament rate as soon as the filament-obstacle distance exceeds the monomer size. Accurate closed-form formulas are obtained for the case of a rapidly moving obstacle. We find the following: (1) load sharing is usually sub-perfect in the sense that polymerization is slower than for a single filament carrying the same average force; (2) the sub-perfect behavior becomes significant at a total force proportional to the logarithm or the square root of the number of filaments, depending on the alignment of the filaments; (3) for the special case of slow barrier diffusion and low opposing force, an enhanced obstacle velocity for an increasing number of filaments is possible; (4) the obstacle velocity is very sensitive to the alignment of the filaments in the bundle, with a staggered alignment being an order of magnitude faster than an unstaggered one at forces of only 0.5 pN per filament for 20 filaments; (5) for large numbers of filaments, the power is maximized at a force well below 1 pN per filament; (6) for intermediate values of the obstacle diffusion coefficient, the shape of the force velocity relation is very similar to that for rapid obstacle diffusion. PMID:25489273

  12. Load sharing in the growth of bundled biopolymers.

    PubMed

    Wang, Ruizhe; Carlsson, A E

    2014-11-01

    To elucidate the nature of load sharing in the growth of multiple biopolymers, we perform stochastic simulations of the growth of biopolymer bundles against obstacles under a broad range of conditions and varying assumptions. The obstacle motion due to thermal fluctuations is treated explicitly. We assume the "Perfect Brownian Ratchet" (PBR) model, in which the polymerization rate equals the free-filament rate as soon as the filament-obstacle distance exceeds the monomer size. Accurate closed-form formulas are obtained for the case of a rapidly moving obstacle. We find the following: (1) load sharing is usually sub-perfect in the sense that polymerization is slower than for a single filament carrying the same average force; (2) the sub-perfect behavior becomes significant at a total force proportional to the logarithm or the square root of the number of filaments, depending on the alignment of the filaments; (3) for the special case of slow barrier diffusion and low opposing force, an enhanced obstacle velocity for an increasing number of filaments is possible; (4) the obstacle velocity is very sensitive to the alignment of the filaments in the bundle, with a staggered alignment being an order of magnitude faster than an unstaggered one at forces of only 0.5 pN per filament for 20 filaments; (5) for large numbers of filaments, the power is maximized at a force well below 1 pN per filament; (6) for intermediate values of the obstacle diffusion coefficient, the shape of the force velocity relation is very similar to that for rapid obstacle diffusion.

  13. On the Perturbative Equivalence Between the Hamiltonian and Lagrangian Quantizations

    NASA Astrophysics Data System (ADS)

    Batalin, I. A.; Tyutin, I. V.

    The Hamiltonian (BFV) and Lagrangian (BV) quantization schemes are proved to be perturbatively equivalent to each other. It is shown in particular that the quantum master equation being treated perturbatively possesses a local formal solution.

  14. Valorization of industrial waste and by-product streams via fermentation for the production of chemicals and biopolymers.

    PubMed

    Koutinas, Apostolis A; Vlysidis, Anestis; Pleissner, Daniel; Kopsahelis, Nikolaos; Lopez Garcia, Isabel; Kookos, Ioannis K; Papanikolaou, Seraphim; Kwan, Tsz Him; Lin, Carol Sze Ki

    2014-04-21

    The transition from a fossil fuel-based economy to a bio-based economy necessitates the exploitation of synergies, scientific innovations and breakthroughs, and step changes in the infrastructure of chemical industry. Sustainable production of chemicals and biopolymers should be dependent entirely on renewable carbon. White biotechnology could provide the necessary tools for the evolution of microbial bioconversion into a key unit operation in future biorefineries. Waste and by-product streams from existing industrial sectors (e.g., food industry, pulp and paper industry, biodiesel and bioethanol production) could be used as renewable resources for both biorefinery development and production of nutrient-complete fermentation feedstocks. This review focuses on the potential of utilizing waste and by-product streams from current industrial activities for the production of chemicals and biopolymers via microbial bioconversion. The first part of this review presents the current status and prospects on fermentative production of important platform chemicals (i.e., selected C2-C6 metabolic products and single cell oil) and biopolymers (i.e., polyhydroxyalkanoates and bacterial cellulose). In the second part, the qualitative and quantitative characteristics of waste and by-product streams from existing industrial sectors are presented. In the third part, the techno-economic aspects of bioconversion processes are critically reviewed. Four case studies showing the potential of case-specific waste and by-product streams for the production of succinic acid and polyhydroxyalkanoates are presented. It is evident that fermentative production of chemicals and biopolymers via refining of waste and by-product streams is a highly important research area with significant prospects for industrial applications.

  15. Permutation modulation for quantization and information reconciliation in CV-QKD systems

    NASA Astrophysics Data System (ADS)

    Daneshgaran, Fred; Mondin, Marina; Olia, Khashayar

    2017-08-01

    This paper is focused on the problem of Information Reconciliation (IR) for continuous variable Quantum Key Distribution (QKD). The main problem is quantization and assignment of labels to the samples of the Gaussian variables observed at Alice and Bob. Trouble is that most of the samples, assuming that the Gaussian variable is zero mean which is de-facto the case, tend to have small magnitudes and are easily disturbed by noise. Transmission over longer and longer distances increases the losses corresponding to a lower effective Signal to Noise Ratio (SNR) exasperating the problem. Here we propose to use Permutation Modulation (PM) as a means of quantization of Gaussian vectors at Alice and Bob over a d-dimensional space with d ≫ 1. The goal is to achieve the necessary coding efficiency to extend the achievable range of continuous variable QKD by quantizing over larger and larger dimensions. Fractional bit rate per sample is easily achieved using PM at very reasonable computational cost. Ordered statistics is used extensively throughout the development from generation of the seed vector in PM to analysis of error rates associated with the signs of the Gaussian samples at Alice and Bob as a function of the magnitude of the observed samples at Bob.

  16. Adsorption of aluminum and lead from wastewater by chitosan-tannic acid modified biopolymers: Isotherms, kinetics, thermodynamics and process mechanism.

    PubMed

    Badawi, M A; Negm, N A; Abou Kana, M T H; Hefni, H H; Abdel Moneem, M M

    2017-06-01

    Chitosan was reacted by tannic acid to obtain three modified chitosan biopolymer. Their chemical structures were characterized by FTIR and elemental analysis. The prepared biopolymers were used to adsorb Al(III) and Pb(II) metal ions from industrial wastewater. The factors affecting the adsorption process were biosorbent amount, initial concentration of metal ion and pH of the medium. The adsorption efficiency increased considerably with the increase of the biosorbent amount and pH of the medium. The adsorption process of biosorbent on different metal ions was fitted by Freundlich adsorption model. The adsorption kinetics was followed Pseudo-second-order kinetic model. The adsorption process occurred according to diffusion mechanism which was confirmed by the interparticle diffusion model. The modified biopolymers were efficient biosorbents for removal of Pb(II) and Al(III) metal ions from the medium. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Development of Seaweed-based Biopolymers for Edible Films and Lectins

    NASA Astrophysics Data System (ADS)

    Praseptiangga, D.

    2017-04-01

    Marine macroalgae (seaweeds) as one of important groups of biopolymers play an important role in human life. Biopolymers have been studied regarding their film-forming properties to produce edible films intended as food packaging and active ingredient carriers. Edible film, a thin layer or which is an integral part of food and can be eaten together with, have been used to avoid food quality deterioration due to physico-chemical changes, texture changes, or chemical reactions. Film-forming materials can be utilized individually or as mixed composite blends. Proteins and polysaccharides used for their mechanical and structural properties, and hydrophobic substances (lipids, essential oils, and emulsifiers) to provide good moisture barrier properties. In addition, bioactive substances from marine natural products, including seaweeds, have been explored for being used in the fields of medicine, food science, pharmaceutical science, biochemistry, and glycobiology. Among them, lectins or carbohydrate-binding proteins from seaweeds have recently been remarked. Lectins (hemagglutinins) are widely distributed in nature and also good candidates in such prospecting of seaweeds. They are useful as convenient tools to discriminate differences in carbohydrate structures and reveal various biological activities through binding and interacting to carbohydrates, suggesting that they are promising candidates for medicinal and clinical application.

  18. Survival of translocated sharp-tailed grouse: Temporal threshold and age effects

    USGS Publications Warehouse

    Mathews, Steven; Coates, Peter S.; Delehanty, David J.

    2016-01-01

    Context: The Columbian sharp-tailed grouse (Tympanuchus phasianellus columbianus) is a subspecies of conservation concern in the western United States, currently occupying ≤10% of its historic range. Land and management agencies are employing translocation techniques to restore Columbian sharp-tailed grouse (CSTG) populations. However, establishing self-sustaining populations by translocating grouse often is unsuccessful, owing, in part, to low survivorship of translocated grouse following release.Aims: We measured and modelled patterns of CSTG mortality for 150 days following translocation into historic range, to better understand patterns and causes of success or failure in conservation efforts to re-establish grouse populations.Methods: We conducted two independent multi-year translocations and evaluated individual and temporal factors associated with CSTG survival up to 150 days following their release. Both translocations were reintroduction attempts in Nevada, USA, to establish viable populations of CSTG into their historic range.Key results: We observed a clear temporal threshold in survival probability, with CSTG mortality substantially higher during the first 50 days following release than during the subsequent 100 days. Additionally, translocated yearling grouse exhibited higher overall survival (0.669 ± 0.062) than did adults (0.420 ± 0.052) across the 150-day period and higher survival than adults both before and after the 50-day temporal threshold.Conclusions: Translocated CSTG are especially vulnerable to mortality for 50 days following release, whereas translocated yearling grouse are more resistant to mortality than are adult grouse. On the basis of the likelihood of survival, yearling CSTG are better candidates for population restoration through translocation than are adult grouse.Implications: Management actions that ameliorate mortality factors for 50 days following translocation and translocations that employ yearling grouse will

  19. FAST TRACK COMMUNICATION: Quantization over boson operator spaces

    NASA Astrophysics Data System (ADS)

    Prosen, Tomaž; Seligman, Thomas H.

    2010-10-01

    The framework of third quantization—canonical quantization in the Liouville space—is developed for open many-body bosonic systems. We show how to diagonalize the quantum Liouvillean for an arbitrary quadratic n-boson Hamiltonian with arbitrary linear Lindblad couplings to the baths and, as an example, explicitly work out a general case of a single boson.

  20. Quantized Vector Potential and the Photon Wave-function

    NASA Astrophysics Data System (ADS)

    Meis, C.; Dahoo, P. R.

    2017-12-01

    The vector potential function {\\overrightarrow{α }}kλ (\\overrightarrow{r},t) for a k-mode and λ-polarization photon, with the quantized amplitude α 0k (ω k ) = ξω k , satisfies the classical wave propagation equation as well as the Schrodinger’s equation with the relativistic massless Hamiltonian \\mathop{H}\\limits∼ =-i\\hslash c\\overrightarrow{\

  1. Dissipation and quantization for composite systems

    NASA Astrophysics Data System (ADS)

    Blasone, Massimo; Jizba, Petr; Scardigli, Fabio; Vitiello, Giuseppe

    2009-11-01

    In the framework of 't Hooft's quantization proposal, we show how to obtain from the composite system of two classical Bateman's oscillators a quantum isotonic oscillator. In a specific range of parameters, such a system can be interpreted as a particle in an effective magnetic field, interacting through a spin-orbit interaction term. In the limit of a large separation from the interaction region one can describe the system in terms of two irreducible elementary subsystems which correspond to two independent quantum harmonic oscillators.

  2. 't Hooft Quantization for Interacting Systems

    NASA Astrophysics Data System (ADS)

    Jizba, Petr; Scardigli, Fabio; Blasone, Massimo; Vitiello, Giuseppe

    2012-02-01

    In the framework of 't Hooft's "deterministic quantization" proposal, we show how to obtain from a composite system of two classical Bateman's oscillators a quantum isotonic oscillator. In a specific range of parameters, such a system can be also interpreted as a particle in an effective magnetic field, interacting through a spin-orbit interaction term. In the limit of a large separation from the interaction region, the system can be described in terms of two irreducible elementary subsystems, corresponding to two independent quantum harmonic oscillators.

  3. Gain-adaptive vector quantization for medium-rate speech coding

    NASA Technical Reports Server (NTRS)

    Chen, J.-H.; Gersho, A.

    1985-01-01

    A class of adaptive vector quantizers (VQs) that can dynamically adjust the 'gain' of codevectors according to the input signal level is introduced. The encoder uses a gain estimator to determine a suitable normalization of each input vector prior to VQ coding. The normalized vectors have reduced dynamic range and can then be more efficiently coded. At the receiver, the VQ decoder output is multiplied by the estimated gain. Both forward and backward adaptation are considered and several different gain estimators are compared and evaluated. An approach to optimizing the design of gain estimators is introduced. Some of the more obvious techniques for achieving gain adaptation are substantially less effective than the use of optimized gain estimators. A novel design technique that is needed to generate the appropriate gain-normalized codebook for the vector quantizer is introduced. Experimental results show that a significant gain in segmental SNR can be obtained over nonadaptive VQ with a negligible increase in complexity.

  4. Quantized transport and steady states of Floquet topological insulators

    NASA Astrophysics Data System (ADS)

    Esin, Iliya; Rudner, Mark S.; Refael, Gil; Lindner, Netanel H.

    2018-06-01

    Robust electronic edge or surface modes play key roles in the fascinating quantized responses exhibited by topological materials. Even in trivial materials, topological bands and edge states can be induced dynamically by a time-periodic drive. Such Floquet topological insulators (FTIs) inherently exist out of equilibrium; the extent to which they can host quantized transport, which depends on the steady-state population of their dynamically induced edge states, remains a crucial question. In this work, we obtain the steady states of two-dimensional FTIs in the presence of the natural dissipation mechanisms present in solid state systems. We give conditions under which the steady-state distribution resembles that of a topological insulator in the Floquet basis. In this state, the distribution in the Floquet edge modes exhibits a sharp feature akin to a Fermi level, while the bulk hosts a small density of excitations. We determine the regimes where topological edge-state transport persists and can be observed in FTIs.

  5. Theory of Passive Polymer Translocation Through Amphiphilic Membranes

    NASA Astrophysics Data System (ADS)

    Werner, Marco; Bathmann, Jasper; Baulin, Vladimir; Sommer, Jens-Uwe; ITN-SNAL''Smart Nano-ObjectsAlteration of Lipid-Bilayers''Team

    We propose a theoretical framework for examining the translocation of flexible polymers through amphiphilic membranes: A generic model for monomer-membrane interactions is formulated and the Edwards equation is employed for calculating the free energy landscape of a polymer in a membrane environment. By the example of homopolymers it is demonstrated that polymer adsorption and the symmetry of conformations with respect to the membrane's mid-plane trigger passive polymer translocation in a narrow window of polymer hydrophobicity. We demonstrate that globular conformations can be taken into account by means of a screening of the external potential, which leads to excellent agreement of predicted translocation times with dynamic lattice Monte Carlo (MC) simulations. The work opens a theoretical road-map on how to design translocating flexible polymers by referring to universal phenomena only: adsorption and conformational symmetry. As confirmed by MC simulations on amphiphilic polymers, promising candidates of translocating polymers in practice are short-block amphiphilic copolymers, which in the limit of small block sizes resemble homopolymers on a coarse grained level. We gratefully thank the European Union's funding of the Initial Training Network SNAL (Grant agreement no. 608184) under the 7th Framework Programme.

  6. Minimum uncertainty and squeezing in diffusion processes and stochastic quantization

    NASA Technical Reports Server (NTRS)

    Demartino, S.; Desiena, S.; Illuminati, Fabrizo; Vitiello, Giuseppe

    1994-01-01

    We show that uncertainty relations, as well as minimum uncertainty coherent and squeezed states, are structural properties for diffusion processes. Through Nelson stochastic quantization we derive the stochastic image of the quantum mechanical coherent and squeezed states.

  7. Microbial translocation and microbiome dsybiosis in HIV-associated immune activation

    PubMed Central

    Zevin, Alexander S.; McKinnon, Lyle; Burgener, Adam; Klatt, Nichole R.

    2016-01-01

    Purpose of Review To describe the mechanisms and consequences of both microbial translocation and microbial dysbiosis in HIV infection. Recent Findings Microbes in HIV are likely playing a large role in contributing to HIV pathogenesis, morbidities and mortality. Two major disruptions to microbial systems in HIV infection include microbial translocation and microbiome dysbiosis. Microbial translocation occurs when the bacteria (or bacterial products) that should be in the lumen of the intestine translocate across the tight epithelial barrier into systemic circulation, where they contribute to inflammation and pathogenesis. This is associated with poorer health outcomes in HIV infected individuals. In addition, microbial populations in the GI tract are also altered after HIV infection, resulting in microbiome dysbiosis, which further exacerbates microbial translocation, epithelial barrier disruption, inflammation, and mucosal immune functioning. Summary Altered microbial regulation in HIV infection can lead to poor health outcomes, and understanding the mechanisms underlying microbial dysbiosis and translocation may result in novel pathways for therapeutic interventions. PMID:26679414

  8. BFV-BRST quantization of two-dimensional supergravity

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fujiwara, T.; Igarashi, Y.; Kuriki, R.

    1996-01-01

    Two-dimensional supergravity theory is quantized as an anomalous gauge theory. In the Batalin-Fradkin (BF) formalism, the anomaly-canceling super-Liouville fields are introduced to identify the original second-class constrained system with a gauge-fixed version of a first-class system. The BFV-BRST quantization applies to formulate the theory in the most general class of gauges. A local effective action constructed in the configuration space contains two super-Liouville actions; one is a noncovariant but local functional written only in terms of two-dimensional supergravity fields, and the other contains the super-Liouville fields canceling the super-Weyl anomaly. Auxiliary fields for the Liouville and the gravity supermultiplets aremore » introduced to make the BRST algebra close off-shell. Inclusion of them turns out to be essentially important especially in the super-light-cone gauge fixing, where the supercurvature equations ({partial_derivative}{sup 3}{sub {minus}}{ital g}{sub +}{sub +}={partial_derivative}{sup 2}{sub {minus}}{chi}{sub +}{sub +}=0) are obtained as a result of BRST invariance of the theory. Our approach reveals the origin of the OSp(1,2) current algebra symmetry in a transparent manner. {copyright} {ital 1996 The American Physical Society.}« less

  9. Topos quantum theory on quantization-induced sheaves

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Nakayama, Kunji, E-mail: nakayama@law.ryukoku.ac.jp

    2014-10-15

    In this paper, we construct a sheaf-based topos quantum theory. It is well known that a topos quantum theory can be constructed on the topos of presheaves on the category of commutative von Neumann algebras of bounded operators on a Hilbert space. Also, it is already known that quantization naturally induces a Lawvere-Tierney topology on the presheaf topos. We show that a topos quantum theory akin to the presheaf-based one can be constructed on sheaves defined by the quantization-induced Lawvere-Tierney topology. That is, starting from the spectral sheaf as a state space of a given quantum system, we construct sheaf-basedmore » expressions of physical propositions and truth objects, and thereby give a method of truth-value assignment to the propositions. Furthermore, we clarify the relationship to the presheaf-based quantum theory. We give translation rules between the sheaf-based ingredients and the corresponding presheaf-based ones. The translation rules have “coarse-graining” effects on the spaces of the presheaf-based ingredients; a lot of different proposition presheaves, truth presheaves, and presheaf-based truth-values are translated to a proposition sheaf, a truth sheaf, and a sheaf-based truth-value, respectively. We examine the extent of the coarse-graining made by translation.« less

  10. Delayed reproduction of translocated red-cockaded woodpeckers

    Treesearch

    James R. McCormick; Richard N. Conner; Daniel Saenz; Brent Burt

    2001-01-01

    Twelve pairs of Red-cockaded Woodpeckers were translocated to the Angelina National Forest from 21 October 1998 to 17 December 1998. Five breeding pairs (consisting of at least one trnnslocated bird) produced eggs/nestlings within the first breeding season after translocation. Clutch initiation dates for all five pairs were later than those of resident breeders. The...

  11. Complex coacervation in charge complementary biopolymers: Electrostatic versus surface patch binding.

    PubMed

    Pathak, Jyotsana; Priyadarshini, Eepsita; Rawat, Kamla; Bohidar, H B

    2017-12-01

    In this review, a number of systems are described to demonstrate the effect of polyelectrolyte chain stiffness (persistence length) on the coacervation phenomena, after we briefly review the field. We consider two specific types of complexation/coacervation: in the first type, DNA is used as a fixed substrate binding to flexible polyions such as gelatin A, bovine serum albumin and chitosan (large persistence length polyelectrolyte binding to low persistence length biopolymer), and in the second case, different substrates such as gelatin A, bovine serum albumin, and chitosan were made to bind to a polyion gelatin B (low persistence length substrate binding to comparable persistence length polyion). Polyelectrolyte chain flexibility was found to have remarkable effect on the polyelectrolyte-protein complex coacervation. The competitive interplay of electrostatic versus surface patch binding (SPB) leading to associative interaction followed by complex coacervation between these biopolymers is elucidated. We modelled the SPB interaction in terms of linear combination of attractive and repulsive Coulombic forces with respect to the solution ionic strength. The aforesaid interactions were established via a universal phase diagram, considering the persistence length of polyion as the sole independent variable. Copyright © 2017 Elsevier B.V. All rights reserved.

  12. Probing topology by "heating": Quantized circular dichroism in ultracold atoms.

    PubMed

    Tran, Duc Thanh; Dauphin, Alexandre; Grushin, Adolfo G; Zoller, Peter; Goldman, Nathan

    2017-08-01

    We reveal an intriguing manifestation of topology, which appears in the depletion rate of topological states of matter in response to an external drive. This phenomenon is presented by analyzing the response of a generic two-dimensional (2D) Chern insulator subjected to a circular time-periodic perturbation. Because of the system's chiral nature, the depletion rate is shown to depend on the orientation of the circular shake; taking the difference between the rates obtained from two opposite orientations of the drive, and integrating over a proper drive-frequency range, provides a direct measure of the topological Chern number (ν) of the populated band: This "differential integrated rate" is directly related to the strength of the driving field through the quantized coefficient η 0 = ν/ ℏ 2 , where h = 2π ℏ is Planck's constant. Contrary to the integer quantum Hall effect, this quantized response is found to be nonlinear with respect to the strength of the driving field, and it explicitly involves interband transitions. We investigate the possibility of probing this phenomenon in ultracold gases and highlight the crucial role played by edge states in this effect. We extend our results to 3D lattices, establishing a link between depletion rates and the nonlinear photogalvanic effect predicted for Weyl semimetals. The quantized circular dichroism revealed in this work designates depletion rate measurements as a universal probe for topological order in quantum matter.

  13. Quantized Spectral Compressed Sensing: Cramer–Rao Bounds and Recovery Algorithms

    NASA Astrophysics Data System (ADS)

    Fu, Haoyu; Chi, Yuejie

    2018-06-01

    Efficient estimation of wideband spectrum is of great importance for applications such as cognitive radio. Recently, sub-Nyquist sampling schemes based on compressed sensing have been proposed to greatly reduce the sampling rate. However, the important issue of quantization has not been fully addressed, particularly for high-resolution spectrum and parameter estimation. In this paper, we aim to recover spectrally-sparse signals and the corresponding parameters, such as frequency and amplitudes, from heavy quantizations of their noisy complex-valued random linear measurements, e.g. only the quadrant information. We first characterize the Cramer-Rao bound under Gaussian noise, which highlights the trade-off between sample complexity and bit depth under different signal-to-noise ratios for a fixed budget of bits. Next, we propose a new algorithm based on atomic norm soft thresholding for signal recovery, which is equivalent to proximal mapping of properly designed surrogate signals with respect to the atomic norm that motivates spectral sparsity. The proposed algorithm can be applied to both the single measurement vector case, as well as the multiple measurement vector case. It is shown that under the Gaussian measurement model, the spectral signals can be reconstructed accurately with high probability, as soon as the number of quantized measurements exceeds the order of K log n, where K is the level of spectral sparsity and $n$ is the signal dimension. Finally, numerical simulations are provided to validate the proposed approaches.

  14. NOS1 mediates AP1 nuclear translocation and inflammatory response.

    PubMed

    Srivastava, Mansi; Baig, Mirza S

    2018-06-01

    A hallmark of the AP1 functioning is its nuclear translocation, which induces proinflammatory cytokine expression and hence the inflammatory response. After endotoxin shock AP1 transcription factor, which comprises Jun, ATF2, and Fos family of proteins, translocates into the nucleus and induces proinflammatory cytokine expression. In the current study, we found, NOS1 inhibition prevents nuclear translocation of the AP1 transcription factor subunits. Pharmacological inhibition of NOS1 impedes translocation of subunits into the nucleus, suppressing the transcription of inflammatory genes causing a diminished inflammatory response. In conclusion, the study shows the novel mechanism of NOS1- mediated AP1 nuclear translocation, which needs to be further explored. Copyright © 2018 Elsevier Masson SAS. All rights reserved.

  15. A translocator-specific export signal establishes the translocator-effector secretion hierarchy that is important for type III secretion system function

    PubMed Central

    Tomalka, Amanda G.; Stopford, Charles M.; Lee, Pei-Chung; Rietsch, Arne

    2012-01-01

    Summary Type III secretion systems are used by many Gram-negative pathogens to directly deliver effector proteins into the cytoplasm of host cells. To accomplish this, bacteria secrete translocator proteins that form a pore in the host-cell membrane through which the effector proteins are then introduced into the host cell. Evidence from multiple systems indicates that the pore-forming translocator proteins are exported before effectors, but how this secretion hierarchy is established is unclear. Here we used the P. aeruginosa translocator protein PopD as a model to identify its export signals. The amino-terminal secretion signal and chaperone, PcrH, are required for export under all conditions. Two novel signals in PopD, one proximal to the chaperone-binding site and one at the very C-terminus of the protein, are required for export of PopD before effector proteins. These novel export signals establish the translocator-effector secretion hierarchy, which in turn, is critical for the delivery of effectors into host cells. PMID:23121689

  16. Derivation of a variational principle for plane strain elastic-plastic silk biopolymers

    NASA Astrophysics Data System (ADS)

    He, J. H.; Liu, F. J.; Cao, J. H.; Zhang, L.

    2014-01-01

    Silk biopolymers, such as spider silk and Bombyx mori silk, behave always elastic-plastically. An elastic-plastic model is adopted and a variational principle for the small strain, rate plasticity problem is established by semi-inverse method. A trial Lagrangian is constructed where an unknown function is included which can be identified step by step.

  17. Studies of antibacterial efficacy of different biopolymer protected silver nanoparticles synthesized under reflux condition

    NASA Astrophysics Data System (ADS)

    Su, Chia Hung; Velusamy, Palaniyandi; Kumar, Govindarajan Venkat; Adhikary, Shritama; Pandian, Kannaiyan; Anbu, Periyasamy

    2017-01-01

    In the present study, a simple method to impregnate silver nanoparticles (AgNPs) into carboxymethyl cellulose (CMC) and sodium alginate (SA) is reported for the first time. Single step synthesis of carboxymethyl cellulose (CMC) and sodium alginate (SA) biopolymer protected silver nanoparticles (AgNPs) using aniline as a reducing agent under reflux conditions was investigated. The synthesized nanoparticles were characterized by UV-Vis spectrophotometry, X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FTIR) and field emission scanning electron microscopy (FESEM). The FESEM results of CMC@AgNPs and SA@AgNPs showed the formation of spherical nanoparticles sized 30-60 nm. Testing of the antibiofilm efficacy of the polymer protected AgNPs against different bacterial strains such as Klebsiella pneumoniae MTCC 4032 and Streptococcus pyogenes MTCC 1924 revealed that the biopolymer protected AgNPs had excellent antibiofilm activity.

  18. Hamiltonian description and quantization of dissipative systems

    NASA Astrophysics Data System (ADS)

    Enz, Charles P.

    1994-09-01

    Dissipative systems are described by a Hamiltonian, combined with a “dynamical matrix” which generalizes the simplectic form of the equations of motion. Criteria for dissipation are given and the examples of a particle with friction and of the Lotka-Volterra model are presented. Quantization is first introduced by translating generalized Poisson brackets into commutators and anticommutators. Then a generalized Schrödinger equation expressed by a dynamical matrix is constructed and discussed.

  19. Development of Advanced Technologies for Complete Genomic and Proteomic Characterization of Quantized Human Tumor Cells

    DTIC Science & Technology

    2014-07-01

    establishment of Glioblastoma ( GBM ) cell lines from GBM patient’s tumor samples and quantized cell populations of each of the parental GBM cell lines, we... GBM patients are now well established and from the basis of the molecular characterization of the tumor development and signatures presented by these...analysis of these quantized cell sub populations and have begun to assemble the protein signatures of GBM tumors underpinned by the comprehensive

  20. In situ enzyme aided adsorption of soluble xylan biopolymers onto cellulosic material.

    PubMed

    Chimphango, Annie F A; Görgens, J F; van Zyl, W H

    2016-06-05

    The functional properties of cellulose fibers can be modified by adsorption of xylan biopolymers. The adsorption is improved when the degree of biopolymers substitution with arabinose and 4-O-methyl-glucuronic acid (MeGlcA) side groups, is reduced. α-l-Arabinofuranosidase (AbfB) and α-d-glucuronidase (AguA) enzymes were applied for side group removal, to increase adsorption of xylan from sugarcane (Saccharum officinarum L) bagasse (BH), bamboo (Bambusa balcooa) (BM), Pinus patula (PP) and Eucalyptus grandis (EH) onto cotton lint. The AguA treatment increased the adsorption of all xylans by up to 334%, whereas, the AbfB increased the adsorption of the BM and PP by 31% and 44%, respectively. A combination of AguA and AbfB treatment increased the adsorption, but to a lesser extent than achieved with AguA treatment. This indicated that the removal of the glucuronic acid side groups provided the most significant increase in xylan adsorption to cellulose, in particular through enzymatic treatment. Copyright © 2016 Elsevier Ltd. All rights reserved.

  1. Charge Requirements for Proton Gradient-driven Translocation of Anthrax Toxin*

    PubMed Central

    Brown, Michael J.; Thoren, Katie L.; Krantz, Bryan A.

    2011-01-01

    Anthrax lethal toxin is used as a model system to study protein translocation. The toxin is composed of a translocase channel, called protective antigen (PA), and an enzyme, called lethal factor (LF). A proton gradient (ΔpH) can drive LF unfolding and translocation through PA channels; however, the mechanism of ΔpH-mediated force generation, substrate unfolding, and establishment of directionality are poorly understood. One recent hypothesis suggests that the ΔpH may act through changes in the protonation state of residues in the substrate. Here we report the charge requirements of LF's amino-terminal binding domain (LFN) using planar lipid bilayer electrophysiology. We found that acidic residues are required in LFN to utilize a proton gradient for translocation. Constructs lacking negative charges in the unstructured presequence of LFN translocate independently of the ΔpH driving force. Acidic residues markedly increase the rate of ΔpH-driven translocation, and the presequence is optimized in its natural acidic residue content for efficient ΔpH-driven unfolding and translocation. We discuss a ΔpH-driven charge state Brownian ratchet mechanism for translocation, where glutamic and aspartic acid residues in the substrate are the “molecular teeth” of the ratchet. Our Brownian ratchet model includes a mechanism for unfolding and a novel role for positive charges, which we propose chaperone negative charges through the PA channel during ΔpH translocation. PMID:21507946

  2. The correlation between biofilm biopolymer composition and membrane fouling in submerged membrane bioreactors.

    PubMed

    Luo, Jinxue; Zhang, Jinsong; Tan, Xiaohui; McDougald, Diane; Zhuang, Guoqiang; Fane, Anthony G; Kjelleberg, Staffan; Cohen, Yehuda; Rice, Scott A

    2014-10-01

    Biofouling, the combined effect of microorganism and biopolymer accumulation, significantly reduces the process efficiency of membrane bioreactors (MBRs). Here, four biofilm components, alpha-polysaccharides, beta-polysaccharides, proteins and microorganisms, were quantified in MBRs. The biomass of each component was positively correlated with the transmembrane pressure increase in MBRs. Proteins were the most abundant biopolymer in biofilms and showed the fastest rate of increase. The spatial distribution and co-localization analysis of the biofouling components indicated at least 60% of the extracellular polysaccharide (EPS) components were associated with the microbial cells when the transmembrane pressure (TMP) entered the jump phase, suggesting that the EPS components were either secreted by the biofilm cells or that the deposition of these components facilitated biofilm formation. It is suggested that biofilm formation and the accumulation of EPS are intrinsically coupled, resulting in biofouling and loss of system performance. Therefore, strategies that control biofilm formation on membranes may result in a significant improvement of MBR performance.

  3. A strategy for generation and balancing of autosome: Y chromosome translocations.

    PubMed

    Joshi, Sonal S; Cheong, Han; Meller, Victoria H

    2014-01-01

    We describe a method for generation and maintenance of translocations that move large autosomal segments onto the Y chromosome. Using this strategy we produced ( 2;Y) translocations that relocate between 1.5 and 4.8 Mb of the 2nd chromosome.. All translocations were easily balanced over a male-specific lethal 1 (msl-1) mutant chromosome. Both halves of the translocation carry visible markers, as well as P-element ends that enable molecular confirmation. Halves of these translocations can be separated to produce offspring with duplications and with lethal second chromosome deficiencies . Such large deficiencies are otherwise tedious to generate and maintain.

  4. Optimization of methylene blue using Ca(2+) and Zn(2+) bio-polymer hydrogel beads: A comparative study.

    PubMed

    Kumar, M; Tamilarasan, R; Arthanareeswaran, G; Ismail, A F

    2015-11-01

    Recently noted that the methylene blue cause severe central nervous system toxicity. It is essential to optimize the methylene blue from aqueous environment. In this study, a comparison of an optimization of methylene blue was investigated by using modified Ca(2+) and Zn(2+) bio-polymer hydrogel beads. A batch mode study was conducted using various parameters like time, dye concentration, bio-polymer dose, pH and process temperature. The isotherms, kinetics, diffusion and thermodynamic studies were performed for feasibility of the optimization process. Freundlich and Langmuir isotherm equations were used for the prediction of isotherm parameters and correlated with dimensionless separation factor (RL). Pseudo-first order and pseudo-second order Lagegren's kinetic equations were used for the correlation of kinetic parameters. Intraparticle diffusion model was employed for diffusion of the optimization process. The Fourier Transform Infrared Spectroscopy (FTIR) shows different absorbent peaks of Ca(2+) and Zn(2+) beads and the morphology of the bio-polymer material analyzed with Scanning Electron Microscope (SEM). The TG & DTA studies show that good thermal stability with less humidity without production of any non-degraded products. Copyright © 2015 Elsevier Inc. All rights reserved.

  5. Concentration Regimes of Biopolymers Xanthan, Tara, and Clairana, Comparing Dynamic Light Scattering and Distribution of Relaxation Time

    PubMed Central

    Oliveira, Patrícia D.; Michel, Ricardo C.; McBride, Alan J. A.; Moreira, Angelita S.; Lomba, Rosana F. T.; Vendruscolo, Claire T.

    2013-01-01

    The aim of this work was to evaluate the utilization of analysis of the distribution of relaxation time (DRT) using a dynamic light back-scattering technique as alternative method for the determination of the concentration regimes in aqueous solutions of biopolymers (xanthan, clairana and tara gums) by an analysis of the overlap (c*) and aggregation (c**) concentrations. The diffusion coefficients were obtained over a range of concentrations for each biopolymer using two methods. The first method analysed the behaviour of the diffusion coefficient as a function of the concentration of the gum solution. This method is based on the analysis of the diffusion coefficient versus the concentration curve. Using the slope of the curves, it was possible to determine the c* and c** for xanthan and tara gum. However, it was not possible to determine the concentration regimes for clairana using this method. The second method was based on an analysis of the DRTs, which showed different numbers of relaxation modes. It was observed that the concentrations at which the number of modes changed corresponded to the c* and c**. Thus, the DRT technique provided an alternative method for the determination of the critical concentrations of biopolymers. PMID:23671627

  6. Event-triggered H∞ state estimation for semi-Markov jumping discrete-time neural networks with quantization.

    PubMed

    Rakkiyappan, R; Maheswari, K; Velmurugan, G; Park, Ju H

    2018-05-17

    This paper investigates H ∞ state estimation problem for a class of semi-Markovian jumping discrete-time neural networks model with event-triggered scheme and quantization. First, a new event-triggered communication scheme is introduced to determine whether or not the current sampled sensor data should be broad-casted and transmitted to the quantizer, which can save the limited communication resource. Second, a novel communication framework is employed by the logarithmic quantizer that quantifies and reduces the data transmission rate in the network, which apparently improves the communication efficiency of networks. Third, a stabilization criterion is derived based on the sufficient condition which guarantees a prescribed H ∞ performance level in the estimation error system in terms of the linear matrix inequalities. Finally, numerical simulations are given to illustrate the correctness of the proposed scheme. Copyright © 2018 Elsevier Ltd. All rights reserved.

  7. Model predictive control of non-linear systems over networks with data quantization and packet loss.

    PubMed

    Yu, Jimin; Nan, Liangsheng; Tang, Xiaoming; Wang, Ping

    2015-11-01

    This paper studies the approach of model predictive control (MPC) for the non-linear systems under networked environment where both data quantization and packet loss may occur. The non-linear controlled plant in the networked control system (NCS) is represented by a Tagaki-Sugeno (T-S) model. The sensed data and control signal are quantized in both links and described as sector bound uncertainties by applying sector bound approach. Then, the quantized data are transmitted in the communication networks and may suffer from the effect of packet losses, which are modeled as Bernoulli process. A fuzzy predictive controller which guarantees the stability of the closed-loop system is obtained by solving a set of linear matrix inequalities (LMIs). A numerical example is given to illustrate the effectiveness of the proposed method. Copyright © 2015 ISA. Published by Elsevier Ltd. All rights reserved.

  8. Translocation of threatened plants as a conservation measure in China.

    PubMed

    Liu, Hong; Ren, Hai; Liu, Qiang; Wen, XiangYing; Maunder, Michael; Gao, JiangYun

    2015-12-01

    We assessed the current status of plant conservation translocation efforts in China, a topic poorly reported in recent scientific literature. We identified 222 conservation translocation cases involving 154 species, of these 87 were Chinese endemic species and 101 (78%) were listed as threatened on the Chinese Species Red List. We categorized the life form of each species and, when possible, determined for each case the translocation type, propagule source, propagule type, and survival and reproductive parameters. A surprisingly large proportion (26%) of the conservation translocations in China were conservation introductions, largely implemented in response to large-scale habitat destruction caused by the Three-Gorge Dam and another hydropower project. Documentation and management of the translocations varied greatly. Less than half the cases had plant survival records. Statistical analyses showed that survival percentages were significantly correlated with plant life form and the type of planting materials. Thirty percent of the cases had records on whether or not individuals flowered or fruited. Results of information theoretic model selection indicated that plant life form, translocation type, propagule type, propagule source, and time since planting significantly influenced the likelihood of flowering and fruiting on the project level. We suggest that the scientific-based application of species conservation translocations should be promoted as part of a commitment to species recovery management. In addition, we recommend that the common practice of within and out of range introductions in nature reserves to be regulated more carefully due to its potential ecological risks. We recommend the establishment of a national office and database to coordinate conservation translocations in China. Our review effort is timely considering the need for a comprehensive national guideline for the newly announced nation-wide conservation program on species with extremely

  9. Can hunting of translocated nuisance Canada geese reduce local conflicts?

    USGS Publications Warehouse

    Holevinski, R.A.; Malecki, R.A.; Curtis, P.D.

    2006-01-01

    Resident Canada geese (Branta canadensis) nest or reside in the temperate latitudes of North America. In past years, translocation-the capture and subsequent release of geese at distant locations-has been used to establish resident goose populations and to reduce nuisance problems. However, with new special hunting seasons designed to target resident Canada geese, we can now evaluate translocation as a management tool when hunting is allowed at release sites. We selected 2 study sites, representative of urban and suburban locations with nuisance resident geese, in central and western New York, USA. In June 2003, we translocated 80 neck-banded adult geese, 14 radiomarked adult females, and 83 juveniles 150 km east and southwest from urban and suburban problem sites in western New York to state-owned Wildlife Management Areas. At these same capture sites, we used 151 neck-banded adult geese, 12 radiomarked females, and 100 juveniles as controls to compare dispersal movements and harvest vulnerability to translocated geese. All observations (n = 45) of translocated radiomarked geese were <20 km from release sites, in areas where hunting was permitted. Only 25 of 538 observations (4.6%) of radiomarked geese at control sites were in areas open to hunting. The remainder of observations occurred at nonhunting locations within 10 km of control sites. More translocated adult geese (23.8%) were harvested than control geese (6.6%; ??2 = 72.98, P = 0.0009). More translocated juvenile geese were harvested (22.9%) than juvenile controls (5.0%; ??2 = 72.30, P = 0.0005). Only 7 (8.8%) translocated adult geese returned to the original capture sites during Canada goose hunting seasons. Translocation of adult and juvenile geese in family groups may alleviate nuisance problems at conflict sites through increased harvest, reducing the number of birds returning in subsequent years.

  10. Ricinus communis-based biopolymer and epidermal growth factor regulations on bone defect repair: A rat tibia model

    NASA Astrophysics Data System (ADS)

    Mendoza-Barrera, C.; Meléndez-Lira, M.; Altuzar, V.; Tomás, S. A.

    2003-01-01

    We report the effect of the addition of an epidermal growth factor to a Ricinus communis-based biopolymer in the healing of a rat tibia model. Bone repair and osteointegration after a period of three weeks were evaluated employing photoacoustic spectroscopy and x-ray diffraction. A parallel study was performed at 1, 2, 3, 4, 5, 6, 7, and 8 weeks with energy dispersive x-ray spectroscopy. We conclude that the use of an epidermal growth factor (group EGF) in vivo accelerates the process of bony repair in comparison with other groups, and that the employment of the Ricinus communis-based biopolymer as a bone substitute decreases bone production.

  11. Starch-entrapped biopolymer microspheres as a novel approach to vary blood glucose profiles.

    PubMed

    Venkatachalam, Mahesh; Kushnick, Michael R; Zhang, Genyi; Hamaker, Bruce R

    2009-10-01

    With emerging knowledge of the impact of the metabolic quality of glycemic carbohydrates on human health, there is a need for novel carbohydrate ingredients that can be custom-made to deliver controlled amounts of glucose to the body and to test hypotheses on the postprandial metabolic consequences of carbohydrates. The goal of the present study was to demonstrate the applicability and action of starch-entrapped biopolymer microspheres as customized, novel, slowly digestible carbohydrates to obtain desired glycemic responses. Starch-entrapped microspheres were developed; and starch digestion and glucose release, subsequent to their cooking (100 degrees C, 20 min) in water, were initially monitored by measuring the rapidly digestible, slowly digestible, and resistant starch fractions using the in vitro Englyst assay. Glycemic and insulinemic responses after consumption of glucose and two different slowly digestible starch microsphere diets were compared using a crossover study in 10 healthy individuals. The mechanism of starch digestion in the microspheres was elucidated from scanning electron microscopic images of the in vitro digested microspheres. Factors such as biopolymer type and concentration, microsphere size, and starch type were manipulated to obtain starch materials with defined amounts of slowly digestible starch based on in vitro studies. Scanning electron microscopy showed that cooked starch entrapped in the dense biopolymer matrix is digested layer by layer from the outside to the inside of the microsphere. Glycemic and insulinemic responses to microsphere test diets were moderate as compared to a glucose diet, but more important, they showed extended glucose release. Starch-entrapped microspheres provide a useful tool to study the postprandial metabolic consequences of slowly digestible carbohydrates.

  12. Physicochemical and Immunomodulatory Properties of Gum Exudates Obtained from Astragalus myriacanthus and Some of Its Isolated Carbohydrate Biopolymers

    PubMed Central

    Hamedi, Azadeh; Yousefi, Gholamhossein; Farjadian, Shirin; Bour Bour, Mitra Saadat; Parhizkar, Elahenaz

    2017-01-01

    Plants gums are complex mixtures of different polysaccharides with a variety of biological activities and pharmaceutical applications. Few studies have focused on physicochemical and biological properties of gums obtained from different plants. This study was designed to determine potential pharmaceutical and pharmacological values of the gum exudates and its isolated biopolymers obtained from Astragalus myriacanthus Boiss [syn. Astracantha myriacantha (Boiss.) Podlech] (Fabaceae). The physicochemical, rheological, and mucoadhesion properties of the gum and its fractions was measured at 7, 27, and 37 °C with and without the presence of NaCl (1%). Also, the structural and immunomodulatory properties of several water soluble biopolymers isolated using ion exchange and size exclusion chromatographic methods were investigated on Jurkat cells at concentrations of 31.25, 62.5, 125, 250, 500 and 1000 μg/mL. The consistency and shear-thinning property of the gum and its fractions decreased as temperature increased. In the presence of NaCl, the consistency increased but no regular pattern was observed regarding to shear-thinning behavior. The mucoadhesion strength was 40.66 ± 2.08 g/cm2 which is suitable for use as a formulary mucoadhesive polymer. The isolated biopolymers had proteo-arabinoglycan structure. Their molecular weight was calculated to be 1.67-667 kDa. One biopolymer had a proliferative effect and others had dose dependent cytotoxic/proliferative properties. The crude gum and its insoluble fraction showed suitable mucoadhesion, swellability and rheological properties which makes them suitable for designing drug delivery systems. The gum proteo-arabinoglycans with different molecular weight and structures had different immunomodulatory properties. PMID:29552060

  13. Detection and Identification of Translocations by Increased Specific Nondisjunction in ASPERGILLUS NIDULANS

    PubMed Central

    Upshall, Alan; Käfer, Etta

    1974-01-01

    A meiotic technique for visual detection of translocations has been applied to ten mitotically identified interchanges, and three new translocations were discovered using this method. Testcrosses between "standard" strains and potential translocation strains—e.g. strains with newly induced mutants or descendants from translocation crosses—are inspected for the frequency of abnormal-looking colonies. In all heterozygous translocation crosses "abnormals" are increased at least tenfold compared to the average control level of 0.15%. Most of these are disomics, and can be recognized by their characteristic phenotypes. Each translocation produces a few specific types, since nondisjunction is increased mainly in the linkage groups involved in the translocation (50–100-fold over control values). Therefore, translocations were not only detected but often tentatively assigned to linkage groups from the analysis of the disomic progeny in crosses. In addition, this technique allows reciprocal and nonreciprocal translocations to be distinguished, since only the latter produce one-third phenotypically abnormal duplication progeny. While results are clearcut in most cases, occasionally problems are encountered, e.g. when morphological mutants segregate in crosses, or when other genetic factors which increase or reduce the frequency of nondisjunction are present in certain strains. PMID:4594334

  14. Vector quantization for efficient coding of upper subbands

    NASA Technical Reports Server (NTRS)

    Zeng, W. J.; Huang, Y. F.

    1994-01-01

    This paper examines the application of vector quantization (VQ) to exploit both intra-band and inter-band redundancy in subband coding. The focus here is on the exploitation of inter-band dependency. It is shown that VQ is particularly suitable and effective for coding the upper subbands. Three subband decomposition-based VQ coding schemes are proposed here to exploit the inter-band dependency by making full use of the extra flexibility of VQ approach over scalar quantization. A quadtree-based variable rate VQ (VRVQ) scheme which takes full advantage of the intra-band and inter-band redundancy is first proposed. Then, a more easily implementable alternative based on an efficient block-based edge estimation technique is employed to overcome the implementational barriers of the first scheme. Finally, a predictive VQ scheme formulated in the context of finite state VQ is proposed to further exploit the dependency among different subbands. A VRVQ scheme proposed elsewhere is extended to provide an efficient bit allocation procedure. Simulation results show that these three hybrid techniques have advantages, in terms of peak signal-to-noise ratio (PSNR) and complexity, over other existing subband-VQ approaches.

  15. Quantized Chiral Magnetic Current from Reconnections of Magnetic Flux.

    PubMed

    Hirono, Yuji; Kharzeev, Dmitri E; Yin, Yi

    2016-10-21

    We introduce a new mechanism for the chiral magnetic effect that does not require an initial chirality imbalance. The chiral magnetic current is generated by reconnections of magnetic flux that change the magnetic helicity of the system. The resulting current is entirely determined by the change of magnetic helicity, and it is quantized.

  16. High-speed detection of DNA translocation in nanopipettes

    NASA Astrophysics Data System (ADS)

    Fraccari, Raquel L.; Ciccarella, Pietro; Bahrami, Azadeh; Carminati, Marco; Ferrari, Giorgio; Albrecht, Tim

    2016-03-01

    We present a high-speed electrical detection scheme based on a custom-designed CMOS amplifier which allows the analysis of DNA translocation in glass nanopipettes on a microsecond timescale. Translocation of different DNA lengths in KCl electrolyte provides a scaling factor of the DNA translocation time equal to p = 1.22, which is different from values observed previously with nanopipettes in LiCl electrolyte or with nanopores. Based on a theoretical model involving electrophoresis, hydrodynamics and surface friction, we show that the experimentally observed range of p-values may be the result of, or at least be affected by DNA adsorption and friction between the DNA and the substrate surface.We present a high-speed electrical detection scheme based on a custom-designed CMOS amplifier which allows the analysis of DNA translocation in glass nanopipettes on a microsecond timescale. Translocation of different DNA lengths in KCl electrolyte provides a scaling factor of the DNA translocation time equal to p = 1.22, which is different from values observed previously with nanopipettes in LiCl electrolyte or with nanopores. Based on a theoretical model involving electrophoresis, hydrodynamics and surface friction, we show that the experimentally observed range of p-values may be the result of, or at least be affected by DNA adsorption and friction between the DNA and the substrate surface. Electronic supplementary information (ESI) available: Gel electrophoresis confirming lengths and purity of DNA samples, comparison between Axopatch 200B and custom-built setup, comprehensive low-noise amplifier characterization, representative I-V curves of nanopipettes used, typical scatter plots of τ vs. peak amplitude for the four LDNA's used, table of most probable τ values, a comparison between different fitting models for the DNA translocation time distribution, further details on the stochastic numerical simulation of the scaling statistics and the derivation of the extended

  17. Oncogene Translocations and NHL

    Cancer.gov

    A colloboration with several large population-based cohorts to determine whether the prevalence or level of t14;18 is associated with risk of NHL and to investigate the clonal relationship between translocation-bearing cells and subsequent tumors

  18. A review of experimental and modeling techniques to determine properties of biopolymer-based nanocomposites

    USDA-ARS?s Scientific Manuscript database

    The nonbiodegradable and nonrenewable nature of plastic packaging has led to a renewed interest in packaging materials based on bio-nanocomposites (biopolymer matrix reinforced with nanoparticles such as layered silicates). One of the reasons for unique properties of bio-nanocomposites is the differ...

  19. Stable silver/biopolymer hybrid plasmonic nanostructures for high performance surface enhanced raman scattering (SERS)

    USDA-ARS?s Scientific Manuscript database

    Silver/biopolymer nanoparticles were prepared by adding 100 mg silver nitrate to 2% polyvinyl alcohol solution and reduced the silver nitrate into silver ion using 2 % trisodium citrate for high performance Surface Enhanced Raman Scattering (SERS) substrates. Optical properties of nanoparticle were ...

  20. Beyond Textbook Illustrations: Hand-Held Models of Ordered DNA and Protein Structures as 3D Supplements to Enhance Student Learning of Helical Biopolymers

    ERIC Educational Resources Information Center

    Jittivadhna, Karnyupha; Ruenwongsa, Pintip; Panijpan, Bhinyo

    2010-01-01

    Textbook illustrations of 3D biopolymers on printed paper, regardless of how detailed and colorful, suffer from its two-dimensionality. For beginners, computer screen display of skeletal models of biopolymers and their animation usually does not provide the at-a-glance 3D perception and details, which can be done by good hand-held models. Here, we…

  1. Quantized Synchronization of Chaotic Neural Networks With Scheduled Output Feedback Control.

    PubMed

    Wan, Ying; Cao, Jinde; Wen, Guanghui

    In this paper, the synchronization problem of master-slave chaotic neural networks with remote sensors, quantization process, and communication time delays is investigated. The information communication channel between the master chaotic neural network and slave chaotic neural network consists of several remote sensors, with each sensor able to access only partial knowledge of output information of the master neural network. At each sampling instants, each sensor updates its own measurement and only one sensor is scheduled to transmit its latest information to the controller's side in order to update the control inputs for the slave neural network. Thus, such communication process and control strategy are much more energy-saving comparing with the traditional point-to-point scheme. Sufficient conditions for output feedback control gain matrix, allowable length of sampling intervals, and upper bound of network-induced delays are derived to ensure the quantized synchronization of master-slave chaotic neural networks. Lastly, Chua's circuit system and 4-D Hopfield neural network are simulated to validate the effectiveness of the main results.In this paper, the synchronization problem of master-slave chaotic neural networks with remote sensors, quantization process, and communication time delays is investigated. The information communication channel between the master chaotic neural network and slave chaotic neural network consists of several remote sensors, with each sensor able to access only partial knowledge of output information of the master neural network. At each sampling instants, each sensor updates its own measurement and only one sensor is scheduled to transmit its latest information to the controller's side in order to update the control inputs for the slave neural network. Thus, such communication process and control strategy are much more energy-saving comparing with the traditional point-to-point scheme. Sufficient conditions for output feedback control

  2. Associative Interactions in Crowded Solutions of Biopolymers Counteract Depletion Effects.

    PubMed

    Groen, Joost; Foschepoth, David; te Brinke, Esra; Boersma, Arnold J; Imamura, Hiromi; Rivas, Germán; Heus, Hans A; Huck, Wilhelm T S

    2015-10-14

    The cytosol of Escherichia coli is an extremely crowded environment, containing high concentrations of biopolymers which occupy 20-30% of the available volume. Such conditions are expected to yield depletion forces, which strongly promote macromolecular complexation. However, crowded macromolecule solutions, like the cytosol, are very prone to nonspecific associative interactions that can potentially counteract depletion. It remains unclear how the cytosol balances these opposing interactions. We used a FRET-based probe to systematically study depletion in vitro in different crowded environments, including a cytosolic mimic, E. coli lysate. We also studied bundle formation of FtsZ protofilaments under identical crowded conditions as a probe for depletion interactions at much larger overlap volumes of the probe molecule. The FRET probe showed a more compact conformation in synthetic crowding agents, suggesting strong depletion interactions. However, depletion was completely negated in cell lysate and other protein crowding agents, where the FRET probe even occupied slightly more volume. In contrast, bundle formation of FtsZ protofilaments proceeded as readily in E. coli lysate and other protein solutions as in synthetic crowding agents. Our experimental results and model suggest that, in crowded biopolymer solutions, associative interactions counterbalance depletion forces for small macromolecules. Furthermore, the net effects of macromolecular crowding will be dependent on both the size of the macromolecule and its associative interactions with the crowded background.

  3. The Unexplored Mechanisms and Regulatory Functions of Ribosomal Translocation

    NASA Astrophysics Data System (ADS)

    Alejo, Jose Luis

    In every cell, protein synthesis is carried out by the ribosome, a complex macromolecular RNA-protein assembly. Decades of structural and kinetic studies have increased our understanding of ribosome initiation, decoding, translocation and termination. Yet, the underlying mechanism of these fundamental processes has yet to be fully delineated. Hence, the molecular basis of regulation remains obscure. Here, single-molecule fluorescence methods are applied to decipher the mechanism and regulatory roles of the multi-step process of directional substrate translocation on the ribosome that accompanies every round of protein synthesis. In Chapter 1, single-molecule fluorescence resonance energy transfer (smFRET) is introduced as a tool for studying bacterial ribosome translocation. Chapter 2 details the experimental methods. In Chapter 3, the elongation factor G(EF-G)-catalyzed movement of substrates through the ribosome is examined from several perspectives or signals reporting on various degrees of freedom of ribosome dynamics. Two ribosomal states interconvert in the presence of EF-G(GDP), displaying novel head domain motions, until relocking takes place. In Chapter 4, in order to test if the mentioned fluctuations leading to relocking are correlated to the engagement of the P-site by the peptidyl-tRNA, the translocation of miscoded tRNAs is studied. Severe defects in the relocking stages of translocation reveal the correlation between this new stage of translocation and P-site tRNA engagement.

  4. Accelerating Families of Fuzzy K-Means Algorithms for Vector Quantization Codebook Design

    PubMed Central

    Mata, Edson; Bandeira, Silvio; de Mattos Neto, Paulo; Lopes, Waslon; Madeiro, Francisco

    2016-01-01

    The performance of signal processing systems based on vector quantization depends on codebook design. In the image compression scenario, the quality of the reconstructed images depends on the codebooks used. In this paper, alternatives are proposed for accelerating families of fuzzy K-means algorithms for codebook design. The acceleration is obtained by reducing the number of iterations of the algorithms and applying efficient nearest neighbor search techniques. Simulation results concerning image vector quantization have shown that the acceleration obtained so far does not decrease the quality of the reconstructed images. Codebook design time savings up to about 40% are obtained by the accelerated versions with respect to the original versions of the algorithms. PMID:27886061

  5. Accelerating Families of Fuzzy K-Means Algorithms for Vector Quantization Codebook Design.

    PubMed

    Mata, Edson; Bandeira, Silvio; de Mattos Neto, Paulo; Lopes, Waslon; Madeiro, Francisco

    2016-11-23

    The performance of signal processing systems based on vector quantization depends on codebook design. In the image compression scenario, the quality of the reconstructed images depends on the codebooks used. In this paper, alternatives are proposed for accelerating families of fuzzy K-means algorithms for codebook design. The acceleration is obtained by reducing the number of iterations of the algorithms and applying efficient nearest neighbor search techniques. Simulation results concerning image vector quantization have shown that the acceleration obtained so far does not decrease the quality of the reconstructed images. Codebook design time savings up to about 40% are obtained by the accelerated versions with respect to the original versions of the algorithms.

  6. Streptococcus pyogenes translocates across an epithelial barrier.

    PubMed

    Sumitomo, Tomoko

    2017-01-01

    Streptococcus pyogenes is a β-hemolytic organism responsible for a wide variety of human diseases that commonly occur as self-limiting purulent diseases of the pharynx and skin. Although the occurrence of invasive infections by S. pyogenes is rare, mortality rates remain high even with progressive medical therapy. As a prerequisite for causing the severe invasive disease, S. pyogenes must invade underlying sterile tissues by translocating across the epithelial barrier. In this study, streptolysin S and SpeB were identified as the novel factors that facilitate bacterial translocation via degradation of intercellular junctions. Furthermore, we found that S. pyogenes exploits host plasminogen for acceleration of bacterial invasion into deeper tissues via tricellular tight junctions. Here, I would like to show our study on bacterial translocation across the epithelial barrier through paracellular route.

  7. Quantization of the Szekeres system

    NASA Astrophysics Data System (ADS)

    Paliathanasis, A.; Zampeli, Adamantia; Christodoulakis, T.; Mustafa, M. T.

    2018-06-01

    We study the quantum corrections on the Szekeres system in the context of canonical quantization in the presence of symmetries. We start from an effective point-like Lagrangian with two integrals of motion, one corresponding to the Hamiltonian and the other to a second rank killing tensor. Imposing their quantum version on the wave function results to a solution which is then interpreted in the context of Bohmian mechanics. In this semiclassical approach, it is shown that there is no quantum corrections, thus the classical trajectories of the Szekeres system are not affected at this level. Finally, we define a probability function which shows that a stationary surface of the probability corresponds to a classical exact solution.

  8. The correlation between gelatin macroscale differences and nanoparticle properties: providing insight into biopolymer variability.

    PubMed

    Stevenson, André T; Jankus, Danny J; Tarshis, Max A; Whittington, Abby R

    2018-05-21

    From therapeutic delivery to sustainable packaging, manipulation of biopolymers into nanostructures imparts biocompatibility to numerous materials with minimal environmental pollution during processing. While biopolymers are appealing natural based materials, the lack of nanoparticle (NP) physicochemical consistency has decreased their nanoscale translation into actual products. Insights regarding the macroscale and nanoscale property variation of gelatin, one of the most common biopolymers already utilized in its bulk form, are presented. Novel correlations between macroscale and nanoscale properties were made by characterizing similar gelatin rigidities obtained from different manufacturers. Samples with significant differences in clarity, indicating sample purity, obtained the largest deviations in NP diameter. Furthermore, a statistically significant positive correlation between macroscale molecular weight dispersity and NP diameter was determined. New theoretical calculations proposing the limited number of gelatin chains that can aggregate and subsequently get crosslinked for NP formation were presented as one possible reason to substantiate the correlation analysis. NP charge and crosslinking extent were also related to diameter. Lower gelatin sample molecular weight dispersities produced statistically smaller average diameters (<75 nm), and higher average electrostatic charges (∼30 mV) and crosslinking extents (∼95%), which were independent of gelatin rigidity, conclusions not shown in the literature. This study demonstrates that the molecular weight composition of the starting material is one significant factor affecting gelatin nanoscale properties and must be characterized prior to NP preparation. Identifying gelatin macroscale and nanoscale correlations offers a route toward greater physicochemical property control and reproducibility of new NP formulations for translation to industry.

  9. Adaptive robust fault tolerant control design for a class of nonlinear uncertain MIMO systems with quantization.

    PubMed

    Ao, Wei; Song, Yongdong; Wen, Changyun

    2017-05-01

    In this paper, we investigate the adaptive control problem for a class of nonlinear uncertain MIMO systems with actuator faults and quantization effects. Under some mild conditions, an adaptive robust fault-tolerant control is developed to compensate the affects of uncertainties, actuator failures and errors caused by quantization, and a range of the parameters for these quantizers is established. Furthermore, a Lyapunov-like approach is adopted to demonstrate that the ultimately uniformly bounded output tracking error is guaranteed by the controller, and the signals of the closed-loop system are ensured to be bounded, even in the presence of at most m-q actuators stuck or outage. Finally, numerical simulations are provided to verify and illustrate the effectiveness of the proposed adaptive schemes. Copyright © 2017 ISA. Published by Elsevier Ltd. All rights reserved.

  10. High-speed detection of DNA translocation in nanopipettes.

    PubMed

    Fraccari, Raquel L; Ciccarella, Pietro; Bahrami, Azadeh; Carminati, Marco; Ferrari, Giorgio; Albrecht, Tim

    2016-04-14

    We present a high-speed electrical detection scheme based on a custom-designed CMOS amplifier which allows the analysis of DNA translocation in glass nanopipettes on a microsecond timescale. Translocation of different DNA lengths in KCl electrolyte provides a scaling factor of the DNA translocation time equal to p = 1.22, which is different from values observed previously with nanopipettes in LiCl electrolyte or with nanopores. Based on a theoretical model involving electrophoresis, hydrodynamics and surface friction, we show that the experimentally observed range of p-values may be the result of, or at least be affected by DNA adsorption and friction between the DNA and the substrate surface.

  11. Second quantization techniques in the scattering of nonidentical composite bodies

    NASA Technical Reports Server (NTRS)

    Norbury, J. W.; Townsend, L. W.; Deutchman, P. A.

    1986-01-01

    Second quantization techniques for describing elastic and inelastic interactions between nonidentical composite bodies are presented and are applied to nucleus-nucleus collisions involving ground-state and one-particle-one-hole excitations. Evaluations of the resultant collision matrix elements are made through use of Wick's theorem.

  12. Quantized Chiral Magnetic Current from Reconnections of Magnetic Flux

    DOE PAGES

    Hirono, Yuji; Kharzeev, Dmitri E.; Yin, Yi

    2016-10-20

    We introduce a new mechanism for the chiral magnetic e ect that does not require an initial chirality imbalance. The chiral magnetic current is generated by reconnections of magnetic ux that change the magnetic helicity of the system. The resulting current is entirely determined by the change of magnetic helicity, and it is quantized.

  13. Survival of mountain quail translocated from two distinct source populations

    USGS Publications Warehouse

    Troy, Ronald J.; Coates, Peter S.; Connelly, John W.; Gillette, Gifford; Delehanty, David J.

    2013-01-01

    Translocation of mountain quail (Oreortyx pictus) to restore viable populations to their former range has become a common practice. Because differences in post-release vital rates between animals from multiple source populations has not been well studied, wildlife and land managers may arbitrarily choose the source population or base the source population on immediate availability when planning translocation projects. Similarly, an understanding of the optimal proportion of individuals from different age and sex classes for translocation would benefit translocation planning. During 2006 and 2007, we captured and translocated 125 mountain quail from 2 ecologically distinct areas: 38 from southern California and 87 from southwestern Oregon. We released mountain quail in the Bennett Hills of south-central Idaho. We radio-marked and monitored a subsample of 58 quail and used them for a 2-part survival analysis. Cumulative survival probability was 0.23 ± 0.05 (SE) at 150 days post-release. We first examined an a priori hypothesis (model) that survival varied between the 2 distinct source populations. We found that source population did not explain variation in survival. This result suggests that wildlife managers have flexibility in selecting source populations for mountain quail translocation efforts. In a post hoc examination, we pooled the quail across source populations and evaluated differences in survival probabilities between sex and age classes. The most parsimonious model indicated that adult male survival was substantially less than survival rates of other mountain quail age and sex classes (i.e., interaction between sex and age). This result suggests that translocation success could benefit by translocating yearling males rather than adult males, perhaps because adult male breeding behavior results in vulnerability to predators

  14. Quantized Average Consensus on Gossip Digraphs with Reduced Computation

    NASA Astrophysics Data System (ADS)

    Cai, Kai; Ishii, Hideaki

    The authors have recently proposed a class of randomized gossip algorithms which solve the distributed averaging problem on directed graphs, with the constraint that each node has an integer-valued state. The essence of this algorithm is to maintain local records, called “surplus”, of individual state updates, thereby achieving quantized average consensus even though the state sum of all nodes is not preserved. In this paper we study a modified version of this algorithm, whose feature is primarily in reducing both computation and communication effort. Concretely, each node needs to update fewer local variables, and can transmit surplus by requiring only one bit. Under this modified algorithm we prove that reaching the average is ensured for arbitrary strongly connected graphs. The condition of arbitrary strong connection is less restrictive than those known in the literature for either real-valued or quantized states; in particular, it does not require the special structure on the network called balanced. Finally, we provide numerical examples to illustrate the convergence result, with emphasis on convergence time analysis.

  15. Biopolymer films to control fusarium dry rot and their application to preserve potato tubers

    USDA-ARS?s Scientific Manuscript database

    Films were cast using sodium alginate (NaAlg), high molecular weight (HMW) chitosan, and low molecular weight (LMW) chitosan as film forming biopolymers. Fludioxonil (Fl) at 1% concentration was used as fungicide. Thermal stability, mechanical, and water sorption properties of the films were examine...

  16. Micro-heterogeneity of corn hulls cellulosic fiber biopolymer studied by multiple-particle tracking (MPT)

    USDA-ARS?s Scientific Manuscript database

    A novel technique named multiple-particle tracking (MPT) was used to investigate the micro-structural heterogeneities of Z-trim, a zero calorie cellulosic fiber biopolymer produced from corn hulls. The Multiple-Particle Tracking (MPT) method was used in this study, which was originally described by ...

  17. Sorting genomes by reciprocal translocations, insertions, and deletions.

    PubMed

    Qi, Xingqin; Li, Guojun; Li, Shuguang; Xu, Ying

    2010-01-01

    The problem of sorting by reciprocal translocations (abbreviated as SBT) arises from the field of comparative genomics, which is to find a shortest sequence of reciprocal translocations that transforms one genome Pi into another genome Gamma, with the restriction that Pi and Gamma contain the same genes. SBT has been proved to be polynomial-time solvable, and several polynomial algorithms have been developed. In this paper, we show how to extend Bergeron's SBT algorithm to include insertions and deletions, allowing to compare genomes containing different genes. In particular, if the gene set of Pi is a subset (or superset, respectively) of the gene set of Gamma, we present an approximation algorithm for transforming Pi into Gamma by reciprocal translocations and deletions (insertions, respectively), providing a sorting sequence with length at most OPT + 2, where OPT is the minimum number of translocations and deletions (insertions, respectively) needed to transform Pi into Gamma; if Pi and Gamma have different genes but not containing each other, we give a heuristic to transform Pi into Gamma by a shortest sequence of reciprocal translocations, insertions, and deletions, with bounds for the length of the sorting sequence it outputs. At a conceptual level, there is some similarity between our algorithm and the algorithm developed by El Mabrouk which is used to sort two chromosomes with different gene contents by reversals, insertions, and deletions.

  18. Bfv Quantization of Relativistic Spinning Particles with a Single Bosonic Constraint

    NASA Astrophysics Data System (ADS)

    Rabello, Silvio J.; Vaidya, Arvind N.

    Using the BFV approach we quantize a pseudoclassical model of the spin-1/2 relativistic particle that contains a single bosonic constraint, contrary to the usual locally supersymmetric models that display first and second class constraints.

  19. Translocation time of a polymer chain through an energy gradient nanopore

    NASA Astrophysics Data System (ADS)

    Luo, Meng-Bo; Zhang, Shuang; Wu, Fan; Sun, Li-Zhen

    2017-06-01

    The translocation time of a polymer chain through an interaction energy gradient nanopore was studied by Monte Carlo simulations and the Fokker-Planck equation with double-absorbing boundary conditions. Both the simulation and calculation revealed three different behaviors for polymer translocation. These behaviors can be explained qualitatively from free-energy landscapes obtained for polymer translocation at different parameters. Results show that the translocation time of a polymer chain through a nanopore can be tuned by suitably designing the interaction energy gradient.

  20. Progress on the three-particle quantization condition

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Briceno, Raul; Hansen, Mawell T.; Sharpe, Stephen R.

    2016-10-01

    We report progress on extending the relativistic model-independent quantization condition for three particles, derived previously by two of us, to a broader class of theories, as well as progress on checking the formalism. In particular, we discuss the extension to include the possibility of 2->3 and 3->2 transitions and the calculation of the finite-volume energy shift of an Efimov-like three-particle bound state. The latter agrees with the results obtained previously using non-relativistic quantum mechanics.

  1. How quantizable matter gravitates: A practitioner's guide

    NASA Astrophysics Data System (ADS)

    Schuller, Frederic P.; Witte, Christof

    2014-05-01

    We present the practical step-by-step procedure for constructing canonical gravitational dynamics and kinematics directly from any previously specified quantizable classical matter dynamics, and then illustrate the application of this recipe by way of two completely worked case studies. Following the same procedure, any phenomenological proposal for fundamental matter dynamics must be supplemented with a suitable gravity theory providing the coefficients and kinematical interpretation of the matter theory, before any of the two theories can be meaningfully compared to experimental data.

  2. Extraction of cellulose microcrystalline from galam wood for biopolymer

    NASA Astrophysics Data System (ADS)

    Ismail, Ika; Sa'adiyah, Devy; Rahajeng, Putri; Suprayitno, Abdi; Andiana, Rocky

    2018-04-01

    Consumption of plastic raw materials tends to increase, but until now the meet of the consumption of plastic raw are still low, even some are still imported. Nowadays, Indonesia's plastic needs are supported by petrochemicals where raw materials are still dependent abroad and petropolymer raw materials are derived from petroleum which will soon be depleted due to rising petroleum needs. Therefore, various studies have been conducted to develop natural fiber-based polymers that are biodegradable and abundant in nature. It is because the natural polymer production process is very efficient and very environmentally friendly. There have been many studies of biopolymers especially natural fiber-based polymers from plants, due to plants containing cellulose, hemicellulose and lignin. However, cellulose is the only one who has crystalline structures. Cellulose has a high crystality compared to amorphous lignin and hemicellulose. In this study, extracted cellulose as biopolymer and amplifier on composite. The cellulose is extracted from galam wood from East Kalimantan. Cellulose extraction will be obtained in nano / micro form through chemical and mechanical treatment processes. The chemical treatment of cellulose extraction is alkalinization process using NaOH solution, bleaching using NaClO2 and acid hydrolysis using sulfuric acid. After chemical treatment, ultrasonic mechanical treatment is made to make cellulose fibers into micro or nano size. Besides, cellulose results will be characterized. Characterization was performed to analyze molecules of cellulose compounds extracted from plants using Fourier Transformation Infra Red (FTIR) testing. XRD testing to analyze cellulose crystallinity. Scanning Electron Microscope (SEM) test to analyze morphology and fiber size.

  3. Polymer translocation under a pulling force: Scaling arguments and threshold forces

    NASA Astrophysics Data System (ADS)

    Menais, Timothée

    2018-02-01

    DNA translocation through nanopores is one of the most promising strategies for next-generation sequencing technologies. Most experimental and numerical works have focused on polymer translocation biased by electrophoresis, where a pulling force acts on the polymer within the nanopore. An alternative strategy, however, is emerging, which uses optical or magnetic tweezers. In this case, the pulling force is exerted directly at one end of the polymer, which strongly modifies the translocation process. In this paper, we report numerical simulations of both linear and structured (mimicking DNA) polymer models, simple enough to allow for a statistical treatment of the pore structure effects on the translocation time probability distributions. Based on extremely extended computer simulation data, we (i) propose scaling arguments for an extension of the predicted translocation times τ ˜N2F-1 over the moderate forces range and (ii) analyze the effect of pore size and polymer structuration on translocation times τ .

  4. Justification of Fuzzy Declustering Vector Quantization Modeling in Classification of Genotype-Image Phenotypes

    NASA Astrophysics Data System (ADS)

    Ng, Theam Foo; Pham, Tuan D.; Zhou, Xiaobo

    2010-01-01

    With the fast development of multi-dimensional data compression and pattern classification techniques, vector quantization (VQ) has become a system that allows large reduction of data storage and computational effort. One of the most recent VQ techniques that handle the poor estimation of vector centroids due to biased data from undersampling is to use fuzzy declustering-based vector quantization (FDVQ) technique. Therefore, in this paper, we are motivated to propose a justification of FDVQ based hidden Markov model (HMM) for investigating its effectiveness and efficiency in classification of genotype-image phenotypes. The performance evaluation and comparison of the recognition accuracy between a proposed FDVQ based HMM (FDVQ-HMM) and a well-known LBG (Linde, Buzo, Gray) vector quantization based HMM (LBG-HMM) will be carried out. The experimental results show that the performances of both FDVQ-HMM and LBG-HMM are almost similar. Finally, we have justified the competitiveness of FDVQ-HMM in classification of cellular phenotype image database by using hypotheses t-test. As a result, we have validated that the FDVQ algorithm is a robust and an efficient classification technique in the application of RNAi genome-wide screening image data.

  5. Quantized Self-Assembly of Discotic Rings in a Liquid Crystal Confined in Nanopores

    NASA Astrophysics Data System (ADS)

    Sentker, Kathrin; Zantop, Arne W.; Lippmann, Milena; Hofmann, Tommy; Seeck, Oliver H.; Kityk, Andriy V.; Yildirim, Arda; Schönhals, Andreas; Mazza, Marco G.; Huber, Patrick

    2018-02-01

    Disklike molecules with aromatic cores spontaneously stack up in linear columns with high, one-dimensional charge carrier mobilities along the columnar axes, making them prominent model systems for functional, self-organized matter. We show by high-resolution optical birefringence and synchrotron-based x-ray diffraction that confining a thermotropic discotic liquid crystal in cylindrical nanopores induces a quantized formation of annular layers consisting of concentric circular bent columns, unknown in the bulk state. Starting from the walls this ring self-assembly propagates layer by layer towards the pore center in the supercooled domain of the bulk isotropic-columnar transition and thus allows one to switch on and off reversibly single, nanosized rings through small temperature variations. By establishing a Gibbs free energy phase diagram we trace the phase transition quantization to the discreteness of the layers' excess bend deformation energies in comparison to the thermal energy, even for this near room-temperature system. Monte Carlo simulations yielding spatially resolved nematic order parameters, density maps, and bond-orientational order parameters corroborate the universality and robustness of the confinement-induced columnar ring formation as well as its quantized nature.

  6. The fundamental role of quantized vibrations in coherent light harvesting by cryptophyte algae

    NASA Astrophysics Data System (ADS)

    Kolli, Avinash; O'Reilly, Edward J.; Scholes, Gregory D.; Olaya-Castro, Alexandra

    2012-11-01

    The influence of fast vibrations on energy transfer and conversion in natural molecular aggregates is an issue of central interest. This article shows the important role of high-energy quantized vibrations and their non-equilibrium dynamics for energy transfer in photosynthetic systems with highly localized excitonic states. We consider the cryptophyte antennae protein phycoerythrin 545 and show that coupling to quantized vibrations, which are quasi-resonant with excitonic transitions is fundamental for biological function as it generates non-cascaded transport with rapid and wider spatial distribution of excitation energy. Our work also indicates that the non-equilibrium dynamics of such vibrations can manifest itself in ultrafast beating of both excitonic populations and coherences at room temperature, with time scales in agreement with those reported in experiments. Moreover, we show that mechanisms supporting coherent excitonic dynamics assist coupling to selected modes that channel energy to preferential sites in the complex. We therefore argue that, in the presence of strong coupling between electronic excitations and quantized vibrations, a concrete and important advantage of quantum coherent dynamics is precisely to tune resonances that promote fast and effective energy distribution.

  7. Generalized centripetal force law and quantization of motion constrained on 2D surfaces

    NASA Astrophysics Data System (ADS)

    Liu, Q. H.; Zhang, J.; Lian, D. K.; Hu, L. D.; Li, Z.

    2017-03-01

    For a particle of mass μ moves on a 2D surface f(x) = 0 embedded in 3D Euclidean space of coordinates x, there is an open and controversial problem whether the Dirac's canonical quantization scheme for the constrained motion allows for the geometric potential that has been experimentally confirmed. We note that the Dirac's scheme hypothesizes that the symmetries indicated by classical brackets among positions x and momenta p and Hamiltonian Hc remain in quantum mechanics, i.e., the following Dirac brackets [ x ,Hc ] D and [ p ,Hc ] D holds true after quantization, in addition to the fundamental ones [ x , x ] D, [ x , p ] D and [ p , p ] D. This set of hypotheses implies that the Hamiltonian operator is simultaneously determined during the quantization. The quantum mechanical relations corresponding to the classical mechanical ones p / μ =[ x ,Hc ] D directly give the geometric momenta. The time t derivative of the momenta p ˙ =[ p ,Hc ] D in classical mechanics is in fact the generalized centripetal force law for particle on the 2D surface, which in quantum mechanics permits both the geometric momenta and the geometric potential.

  8. Functional significance of differential eNOS translocation

    PubMed Central

    Sánchez, Fabiola A.; Savalia, Nirav B.; Durán, Ricardo G.; Lal, Brajesh K.; Boric, Mauricio P.; Durán, Walter N.

    2006-01-01

    Nitric oxide (NO) regulates flow and permeability. ACh and platelet-activating factor (PAF) lead to endothelial NO synthase (eNOS) phosphorylation and NO release. While ACh causes only vasodilation, PAF induces vasoconstriction and hyperpermeability. The key differential signaling mechanisms for discriminating between vasodilation and hyperpermeability are unknown. We tested the hypothesis that differential translocation may serve as a regulatory mechanism of eNOS to determine specific vascular responses. We used ECV-304 cells permanently transfected with eNOS-green fluorescent protein (ECVeNOS-GFP) and demonstrated that the agonists activate eNOS and reproduce their characteristic endothelial permeability effects in these cells. We evaluated eNOS localization by lipid raft analysis and immunofluorescence microscopy. After PAF and ACh, eNOS moves away from caveolae. eNOS distributes both in the plasma membrane and Golgi in control cells. ACh (10−5 M, 10−4 M) translocated eNOS preferentially to the trans-Golgi network (TGN) and PAF (10−7 M) preferentially to the cytosol. We suggest that PAF-induced eNOS translocation preferentially to cytosol reflects a differential signaling mechanism related to changes in permeability, whereas ACh-induced eNOS translocation to the TGN is related to vasodilation. PMID:16679407

  9. Introductory lecture: interpreting and predicting Hofmeister salt ion and solute effects on biopolymer and model processes using the solute partitioning model.

    PubMed

    Record, M Thomas; Guinn, Emily; Pegram, Laurel; Capp, Michael

    2013-01-01

    Understanding how Hofmeister salt ions and other solutes interact with proteins, nucleic acids, other biopolymers and water and thereby affect protein and nucleic acid processes as well as model processes (e.g. solubility of model compounds) in aqueous solution is a longstanding goal of biophysical research. Empirical Hofmeister salt and solute "m-values" (derivatives of the observed standard free energy change for a model or biopolymer process with respect to solute or salt concentration m3) are equal to differences in chemical potential derivatives: m-value = delta(dmu2/dm3) = delta mu23, which quantify the preferential interactions of the solute or salt with the surface of the biopolymer or model system (component 2) exposed or buried in the process. Using the solute partitioning model (SPM), we dissect mu23 values for interactions of a solute or Hofmeister salt with a set of model compounds displaying the key functional groups of biopolymers to obtain interaction potentials (called alpha-values) that quantify the interaction of the solute or salt per unit area of each functional group or type of surface. Interpreted using the SPM, these alpha-values provide quantitative information about both the hydration of functional groups and the competitive interaction of water and the solute or salt with functional groups. The analysis corroborates and quantifies previous proposals that the Hofmeister anion and cation series for biopolymer processes are determined by ion-specific, mostly unfavorable interactions with hydrocarbon surfaces; the balance between these unfavorable nonpolar interactions and often-favorable interactions of ions with polar functional groups determine the series null points. The placement of urea and glycine betaine (GB) at opposite ends of the corresponding series of nonelectrolytes results from the favorable interactions of urea, and unfavorable interactions of GB, with many (but not all) biopolymer functional groups. Interaction potentials and

  10. Floating-point system quantization errors in digital control systems

    NASA Technical Reports Server (NTRS)

    Phillips, C. L.; Vallely, D. P.

    1978-01-01

    This paper considers digital controllers (filters) operating in floating-point arithmetic in either open-loop or closed-loop systems. A quantization error analysis technique is developed, and is implemented by a digital computer program that is based on a digital simulation of the system. The program can be integrated into existing digital simulations of a system.

  11. Effects of long distance translocation on corticosterone and testosterone levels in male rattlesnakes.

    PubMed

    Heiken, Kory H; Brusch, George A; Gartland, Sarah; Escallón, Camilo; Moore, Ignacio T; Taylor, Emily N

    2016-10-01

    Translocation is an increasingly common conservation tool used to augment declining populations or to remove nuisance animals from areas of human conflict. Studies show that venomous snakes translocated long distances may wander and experience increased mortality. However, potential sub-lethal physiological effects on translocated snakes remain unknown. We conducted an experimental study on free-ranging rattlesnakes to test the hypothesis that long distance translocation is stressful. The glucocorticoid response to translocation was variable among snakes. There was some evidence that translocation may be stressful, as baseline corticosterone levels in most snakes rose following translocation, whereas levels remained consistent in control snakes. Interestingly, testosterone levels rose dramatically following translocation, possibly reflecting effects of interaction with new environmental cues and/or resident snakes, or effects of navigation in a new environment. Corticosterone and testosterone were positively correlated. Our study shows that long distance translocation can affect steroid hormone concentrations in rattlesnakes, a result that should be taken into consideration when managing nuisance snakes or repatriating animals to the wild. Copyright © 2016 Elsevier Inc. All rights reserved.

  12. Dermatoglyphs in carriers of a balanced 15;21 translocation.

    PubMed

    Rodewald, A; Zankl, M; Zankl, H; Zang, K D

    1980-08-01

    Cytogenetic and dermatoglyphic features were studied in a large family with an inherited 15;21 translocation. Of 35 healthy members of the family, 21 carried the translocation chromosome and 14 were chromosomally normal. There were six members with Down's syndrome who had the translocation. Dermatoglyphic studies showed that carriers of this balanced translocation had the following peculiarities significantly more often than the general population. On the hands, they had ulnar loops on the fingertips, symmetrical high terminations of the A line, symmetrical ulnar loops on the hypothenar areas, distal loops in the 3rd interdigital areas, open fields in the 4th interdigital areas, axial triradii in the distal position, and single transverse palmar creases (Sydney lines). On the feet, they had small distal loops on the hallucal area and distal loops in the 4th interdigital areas. The translocation carriers also had significantly more often than non-carrier relatives symmetrical high terminations of the A line, open fields in the 4th interdigital areas, distal axial triradii, and Sydney lines. On the feet, they had small distal loops on the hallucal areas, distal loops in the 4th interdigital areas, and tibial loops on the proximal hypothenar areas. The data obtained from this study, and especially the values of the Walker and general indices, indicate that some of the dermatoglyphic stigmata of Down's syndrome are directly associated with the 15;21 translocation carrier state and can therefore be used for predicting that state.

  13. Covariant spinor representation of iosp(d,2/2) and quantization of the spinning relativistic particle

    NASA Astrophysics Data System (ADS)

    Jarvis, P. D.; Corney, S. P.; Tsohantjis, I.

    1999-12-01

    A covariant spinor representation of iosp(d,2/2) is constructed for the quantization of the spinning relativistic particle. It is found that, with appropriately defined wavefunctions, this representation can be identified with the state space arising from the canonical extended BFV-BRST quantization of the spinning particle with admissible gauge fixing conditions after a contraction procedure. For this model, the cohomological determination of physical states can thus be obtained purely from the representation theory of the iosp(d,2/2) algebra.

  14. Production and Identification of Wheat-Agropyron cristatum 2P Translocation Lines

    PubMed Central

    Li, Huanhuan; Lv, Mingjie; Song, Liqiang; Zhang, Jinpeng; Gao, Ainong; Li, Lihui; Liu, Weihua

    2016-01-01

    Agropyron cristatum (L.) Gaertn. (2n = 28, PPPP), a wild relative of common wheat, possesses many potentially valuable traits that can be transferred to common wheat through breeding programs. The wheat-A. cristatum disomic addition and translocation lines can be used as bridge materials to introduce alien chromosomal segments to wheat. Wheat-A. cristatum 2P disomic addition line II-9-3 was highly resistant to powdery mildew and leaf rust, which was reported in our previous study. However, some translocation lines induced from II-9-3 have not been reported. In this study, some translocation lines were induced from II-9-3 by 60Co-γ irradiation and gametocidal chromosome 2C and then identified by cytological methods. Forty-nine wheat-A. cristatum translocation lines were obtained and various translcoation types were identified by GISH (genomic in situ hybridization), such as whole-arm, segmental and intercalary translocations. Dual-color FISH (fluorescent in situ hybridization) was applied to identify the wheat chromosomes involved in the translocations, and the results showed that A. cristatum 2P chromosome segments were translocated to the different wheat chromosomes, including 1A, 2A, 3A, 4A, 5A, 6A, 7A, 3B, 5B, 7B, 1D, 4D and 6D. Many different types of wheat-A. cristatum alien translocation lines would be valuable for not only identifying and cloning A. cristatum 2P-related genes and understanding the genetics and breeding effects of the translocation between A. cristatum chromosome 2P and wheat chromosomes, but also providing new germplasm resources for the wheat genetic improvement. PMID:26731742

  15. Micro-heterogeneity of corn hulls cellulosic fiber biopolymer studied by multiple-particle tracking (MPT)

    USDA-ARS?s Scientific Manuscript database

    A novel technique named multiple-particle tracking (MPT) was used to investigate the micro-structural heterogeneities of Z-trim, a zero calorie cellulosic fiber biopolymer produced from corn hulls. The principle of MPT technique is to monitor the thermally driven motion of inert micro-spheres, which...

  16. Role of adsorption in combined membrane fouling by biopolymers coexisting with inorganic particles.

    PubMed

    Chen, Xu-di; Wang, Zhi; Liu, Dan-Yang; Xiao, Kang; Guan, Jing; Xie, Yuefeng F; Wang, Xiao-Mao; Waite, T David

    2018-01-01

    This study was conducted in order to obtain a better understanding of the combined fouling by biopolymers coexisting with inorganic particles from the aspects of fouling index, fouling layer structure and biopolymer-particle interactions. Calcium alginate was used as the model biopolymer and Fe 2 O 3 , Al 2 O 3 , kaolin, and SiO 2 were used as model inorganic particles. Results showed that the combined fouling differed greatly among the four types of inorganic particles. The differences were attributed particularly to the different adsorption capacities for calcium alginate by the particles with this capacity decreasing in the order of Fe 2 O 3 , Al 2 O 3 , kaolin and SiO 2 . Particle size measurement and electron microscopic observation indicated the formation of agglomerates between calcium alginate and those inorganic particles exhibiting strong adsorption capacity. A structure was proposed for the combined fouling layer comprised of a backbone cake layer of alginate-inorganic particle agglomerates with the pores partially filled with discontinuous calcium alginate gels. The filterability of the fouling layer was primarily determined by the abundance of the gels. The strength of physical interaction between calcium alginate and each type of inorganic particle was calculated from the respective surface energies and zeta potentials. Calculation results showed that the extent of physical interaction increased in the order of Al 2 O 3 , Fe 2 O 3 , kaolin and SiO 2 , with this order differing from that of adsorption capacity. Chemical interactions may also play an important role in the adsorption of alginate and the consequent combined fouling. High-resolution XPS scans revealed a slight shift of electron binding energies when alginate was adsorbed. Copyright © 2017 Elsevier Ltd. All rights reserved.

  17. Chitosugar translocation by an unexpressed monomeric protein channel

    NASA Astrophysics Data System (ADS)

    Soysa, H. Sasimali M.; Suginta, Wipa; Moonsap, Watcharaporn; Smith, M. F.

    2018-05-01

    The outer membrane protein channel Ec ChiP , associated with a silent gene in E . coli, is a monomeric chitoporin. In a glucose-deficient environment, E . coli can express the ChiP gene to exploit chitin degradation products. Single-channel small ion current measurements, which reveal the dynamics of single sugar molecules trapped in channel, are used here to study the exotic transport of chitosugars by E . coli. Molecules escape from the channel on multiple timescales. Voltage-dependent trapping rates observed for charged chitosan molecules, as well as model calculations, indicate that the rapid escape processes are those in which the molecule escapes back to the side of the membrane from which it originated. The probability that a sugar molecule is translocated through the membrane is thus estimated from the current data and the dependence of this translocation probability on the length of the chitosugar molecule and the applied voltage analyzed. The described method for obtaining the translocation probability and related molecular translocation current is applicable to other transport channels.

  18. Modified biopolymers as sorbents for the removal of naphthenic acids from oil sands process affected water (OSPW).

    PubMed

    Arshad, Muhammad; Khosa, M A; Siddique, Tariq; Ullah, Aman

    2016-11-01

    Oil sands operations consume large volumes of water in bitumen extraction process and produce tailings that express pore water to the surface of tailings ponds known as oil sands process-affected water (OSPW). The OSPW is toxic and cannot be released into the environment without treatment. In addition to metals, dissolved solids, dissolved gases, hydrocarbons and polyaromatic compounds etc., OSPW also contains a complex mixture of dissolved organic acids, referred to as naphthenic acids (NAs). The NAs are highly toxic and react with metals to develop highly corrosive functionalities which cause corrosion in the oil sands processing and refining processes. We have chemically modified keratin biopolymer using polyhedral oligomeric silsesquioxanes (POSS) nanocages and goethite dopant to unfold keratinous structure for improving functionality. The untreated neat keratin and two modified sorbents were characterized to investigate structural, morphological, dimensional and thermal properties. These sorbents were then tested for the removal of NAs from OSPW. The NAs were selectively extracted and quantified before and after sorption process. The biosorption capacity (Q), rejection percentage (R%) and isotherm models were studied to investigate NAs removal efficiency of POSS modified keratin biopolymer (PMKB) and goethite modified keratin biopolymer (GMKB) from aliquots of OSPW. Copyright © 2016 Elsevier Ltd. All rights reserved.

  19. Probing topology by “heating”: Quantized circular dichroism in ultracold atoms

    PubMed Central

    Tran, Duc Thanh; Dauphin, Alexandre; Grushin, Adolfo G.; Zoller, Peter; Goldman, Nathan

    2017-01-01

    We reveal an intriguing manifestation of topology, which appears in the depletion rate of topological states of matter in response to an external drive. This phenomenon is presented by analyzing the response of a generic two-dimensional (2D) Chern insulator subjected to a circular time-periodic perturbation. Because of the system’s chiral nature, the depletion rate is shown to depend on the orientation of the circular shake; taking the difference between the rates obtained from two opposite orientations of the drive, and integrating over a proper drive-frequency range, provides a direct measure of the topological Chern number (ν) of the populated band: This “differential integrated rate” is directly related to the strength of the driving field through the quantized coefficient η0 = ν/ℏ2, where h = 2π ℏ is Planck’s constant. Contrary to the integer quantum Hall effect, this quantized response is found to be nonlinear with respect to the strength of the driving field, and it explicitly involves interband transitions. We investigate the possibility of probing this phenomenon in ultracold gases and highlight the crucial role played by edge states in this effect. We extend our results to 3D lattices, establishing a link between depletion rates and the nonlinear photogalvanic effect predicted for Weyl semimetals. The quantized circular dichroism revealed in this work designates depletion rate measurements as a universal probe for topological order in quantum matter. PMID:28835930

  20. Mechanisms Leading to Nonrandom, Nonhomologous Chromosomal Translocations in Leukemia

    PubMed Central

    Gollin, Susanne M.

    2007-01-01

    Nonrandom, reciprocal translocations between nonhomologous chromosomes are critical cellular events that lead to malignant transformation. Therefore, understanding the mechanisms involved in these chromosomal rearrangements is essential for understanding the process of carcinogenesis. There has been substantial discussion in the literature over the past ten years about mechanisms involved in constitutional chromosomal rearrangements, including deletions, duplications, and translocations. Yet our understanding of the mechanisms of chromosomal rearrangements in cancer is still developing. This review presents what is known about the mechanisms involved in selected nonrandom chromosomal translocations in leukemia. PMID:17157028

  1. Effect of biopolymer on the dewatering characteristics of autothermal thermophilic aerobic digestion of sludges.

    PubMed

    Agarwal, S; Abu-Orf, M M; Novak, J T

    2006-03-01

    Autothermal thermophilic aerobic digestion of sludge is known to produce poorly dewatering sludges. Laboratory studies were conducted to investigate the reasons for the poor dewatering. It was found that, during digestion, proteins and polysaccharides were released into solution, and that these could be linked to the deterioration in dewatering. The biopolymer release was accompanied by an increase in the monovalent-to-divalent (M/D) cation ratio. The degree to which the M/D caused deterioration of the sludges depended on the presence of iron in sludge. When the iron content was high, the release of protein and polysaccharides was low. When iron was low, the release of protein and polysaccharides increased linearly with the M/D ratio. The dose of conditioning chemicals, cationic polymer or ferric chloride, was related to the amount of colloidal biopolymer present in solution. The findings suggest that the addition of iron during the digestion process has the potential to produce better dewatering sludges.

  2. Polymethacrylate-based monoliths as stationary phases for separation of biopolymers and immobilization of enzymes.

    PubMed

    Martinović, Tamara; Josić, Djuro

    2017-11-01

    The experiences in the production and application of polymethacrylate-based monolithic supports, since their development almost thirty years ago, are presented. The main driving force for the development of new chromatographic supports was the necessity for the isolation and separation of physiologically active biopolymers and their use for therapeutic purposes. For this sake, a development of a method for fast separation, preventing denaturation and preserving their biological activity was necessary. Development of polysaccharide-based supports, followed by the introduction of polymer-based chromatographic media, is shortly described. This development was followed by the advances in monolithic media that are now used for both large- and small-scale separation of biopolymers and nanoparticles. Finally, a short overview is given about the applications of monoliths for sample displacement chromatography, resulting in isolation of physiologically active biomolecules, such as proteins, protein complexes, and nucleic acid, as well as high-throughput sample preparation for proteomic investigations. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  3. Cellular and molecular effects of nonreciprocal chromosome translocations in Saccharomyces cerevisiae

    PubMed Central

    Nikitin, Dmitri; Tosato, Valentina; Zavec, Apolonija Bedina; Bruschi, Carlo V.

    2008-01-01

    Saccharomyces cerevisiae strains harboring a nonreciprocal, bridge-induced translocation (BIT) between chromosomes VIII and XV exhibited an abnormal phenotype comprising elongated buds and multibudded, unevenly nucleated pseudohyphae. In these cells, we found evidence of molecular effects elicited by the translocation event and specific for its particular genomic location. Expression of genes flanking both translocation breakpoints increased up to five times, correlating with an increased RNA polymerase II binding to their promoters and with their histone acetylation pattern. Microarray data, CHEF, and quantitative PCR confirmed the data on the dosage of genes present on the chromosomal regions involved in the translocation, indicating that telomeric fragments were either duplicated or integrated mostly on chromosome XI. FACS analysis revealed that the majority of translocant cells were blocked in G1 phase and a few of them in G2. Some cells showed a posttranslational decrease of cyclin B1, in agreement with elongated buds diagnostic of a G2/M phase arrest. The actin1 protein was in some cases modified, possibly explaining the abnormal morphology of the cells. Together with the decrease in Rad53p and the lack of its phosphorylation, these results indicate that these cells have undergone adaptation after checkpoint-mediated G2/M arrest after chromosome translocation. These BIT translocants could serve as model systems to understand further the cellular and molecular effects of chromosome translocation and provide fundamental information on its etiology of neoplastic transformation in mammals. PMID:18599460

  4. Validation of a quantized-current source with 0.2 ppm uncertainty

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Stein, Friederike; Fricke, Lukas, E-mail: lukas.fricke@ptb.de; Scherer, Hansjörg

    2015-09-07

    We report on high-accuracy measurements of quantized current, sourced by a tunable-barrier single-electron pump at frequencies f up to 1 GHz. The measurements were performed with an ultrastable picoammeter instrument, traceable to the Josephson and quantum Hall effects. Current quantization according to I = ef with e being the elementary charge was confirmed at f = 545 MHz with a total relative uncertainty of 0.2 ppm, improving the state of the art by about a factor of 5. The accuracy of a possible future quantum current standard based on single-electron transport was experimentally validated to be better than the best (indirect) realization of the ampere within themore » present SI.« less

  5. Quantized topological magnetoelectric effect of the zero-plateau quantum anomalous Hall state

    DOE PAGES

    Wang, Jing; Lian, Biao; Qi, Xiao-Liang; ...

    2015-08-10

    The topological magnetoelectric effect in a three-dimensional topological insulator is a novel phenomenon, where an electric field induces a magnetic field in the same direction, with a universal coefficient of proportionality quantized in units of $e²/2h$. Here in this paper, we propose that the topological magnetoelectric effect can be realized in the zero-plateau quantum anomalous Hall state of magnetic topological insulators or a ferromagnet-topological insulator heterostructure. The finite-size effect is also studied numerically, where the magnetoelectric coefficient is shown to converge to a quantized value when the thickness of the topological insulator film increases. We further propose a device setupmore » to eliminate nontopological contributions from the side surface.« less

  6. Characterization of Cross-Linked Porous Gelatin Carriers and Their Interaction with Corneal Endothelium: Biopolymer Concentration Effect

    PubMed Central

    Lai, Jui-Yang; Ma, David Hui-Kang; Lai, Meng-Heng; Li, Ya-Ting; Chang, Ren-Jie; Chen, Li-Mei

    2013-01-01

    Cell sheet-mediated tissue regeneration is a promising approach for corneal reconstruction. However, the fragility of bioengineered corneal endothelial cell (CEC) monolayers allows us to take advantage of cross-linked porous gelatin hydrogels as cell sheet carriers for intraocular delivery. The aim of this study was to further investigate the effects of biopolymer concentrations (5–15 wt%) on the characteristic and safety of hydrogel discs fabricated by a simple stirring process combined with freeze-drying method. Results of scanning electron microscopy, porosity measurements, and ninhydrin assays showed that, with increasing solid content, the pore size, porosity, and cross-linking index of carbodiimide treated samples significantly decreased from 508±30 to 292±42 µm, 59.8±1.1 to 33.2±1.9%, and 56.2±1.6 to 34.3±1.8%, respectively. The variation in biopolymer concentrations and degrees of cross-linking greatly affects the Young’s modulus and swelling ratio of the gelatin carriers. Differential scanning calorimetry measurements and glucose permeation studies indicated that for the samples with a highest solid content, the highest pore wall thickness and the lowest fraction of mobile water may inhibit solute transport. When the biopolymer concentration is in the range of 5–10 wt%, the hydrogels have high freezable water content (0.89–0.93) and concentration of permeated glucose (591.3–615.5 µg/ml). These features are beneficial to the in vitro cultivation of CECs without limiting proliferation and changing expression of ion channel and pump genes such as ATP1A1, VDAC2, and AQP1. In vivo studies by analyzing the rabbit CEC morphology and count also demonstrate that the implanted gelatin discs with the highest solid content may cause unfavorable tissue-material interactions. It is concluded that the characteristics of cross-linked porous gelatin hydrogel carriers and their triggered biological responses are in relation to biopolymer concentration

  7. Poison Domains Block Transit of Translocated Substrates via the Legionella pneumophila Icm/Dot System

    PubMed Central

    Amyot, Whitney M.; deJesus, Dennise

    2013-01-01

    Legionella pneumophila uses the Icm/Dot type 4B secretion system (T4BSS) to deliver translocated protein substrates to the host cell, promoting replication vacuole formation. The conformational state of the translocated substrates within the bacterial cell is unknown, so we sought to determine if folded substrates could be translocated via this system. Fusions of L. pneumophila Icm/Dot-translocated substrates (IDTS) to dihydrofolate reductase (DHFR) or ubiquitin (Ub), small proteins known to fold rapidly, resulted in proteins with low translocation efficiencies. The folded moieties did not cause increased aggregation of the IDTS and did not impede interaction with the adaptor protein complex IcmS/IcmW, which is thought to form a soluble complex that promotes translocation. The translocation defect was alleviated with a Ub moiety harboring mutations known to destabilize its structure, indicating that unfolded proteins are preferred substrates. Real-time analysis of translocation, following movement during the first 30 min after bacterial contact with host cells, revealed that the folded moiety caused a kinetic defect in IDTS translocation. Expression of an IDTS fused to a folded moiety interfered with the translocation of other IDTS, consistent with it causing a blockage of the translocation channel. Furthermore, the folded protein fusions also interfered with intracellular growth, consistent with inefficient or impaired translocation of proteins critical for L. pneumophila intracellular growth. These studies indicate that substrates of the Icm/Dot T4SS are translocated to the host cytosol in an unfolded conformation and that folded proteins are stalled within the translocation channel, impairing the function of the secretion system. PMID:23798536

  8. The lattice and quantized Yang–Mills theory

    DOE PAGES

    Creutz, Michael

    2015-11-30

    Quantized Yang–Mills fields lie at the heart of our understanding of the strong nuclear force. To understand the theory at low energies, we must work in the strong coupling regime. The primary technique for this is the lattice. While basically an ultraviolet regulator, the lattice avoids the use of a perturbative expansion. In this paper, I discuss the historical circumstances that drove us to this approach, which has had immense success, convincingly demonstrating quark confinement and obtaining crucial properties of the strong interactions from first principles.

  9. Biopolymer encapsulated live influenza virus as a universal CD8+ T cell vaccine against influenza virus.

    PubMed

    Boesteanu, Alina C; Babu, Nadarajan S; Wheatley, Margaret; Papazoglou, Elisabeth S; Katsikis, Peter D

    2010-12-16

    Current influenza virus vaccines primarily elicit antibodies and can be rendered ineffective by antigenic drift and shift. Vaccines that elicit CD8+ T cell responses targeting less variable proteins may function as universal vaccines that have broad reactivity against different influenza virus strains. To generate such a universal vaccine, we encapsulated live influenza virus in a biopolymer and delivered it to mice subcutaneously. This vaccine was safe, induced potent CD8+ T cell immunity and protected mice against heterosubtypic lethal challenge. Safety of subcutaneous (SQ) vaccination was tested in Rag-/-γc-/- double knockout mice which we show cannot control intranasal infection. Biopolymer encapsulation of live influenza virus could be used to develop universal CD8+ T cell vaccines against heterosubtypic and pandemic strains. Copyright © 2010 Elsevier Ltd. All rights reserved.

  10. Role of non-equilibrium conformations on driven polymer translocation.

    PubMed

    Katkar, H H; Muthukumar, M

    2018-01-14

    One of the major theoretical methods in understanding polymer translocation through a nanopore is the Fokker-Planck formalism based on the assumption of quasi-equilibrium of polymer conformations. The criterion for applicability of the quasi-equilibrium approximation for polymer translocation is that the average translocation time per Kuhn segment, ⟨τ⟩/N K , is longer than the relaxation time τ 0 of the polymer. Toward an understanding of conditions that would satisfy this criterion, we have performed coarse-grained three dimensional Langevin dynamics and multi-particle collision dynamics simulations. We have studied the role of initial conformations of a polyelectrolyte chain (which were artificially generated with a flow field) on the kinetics of its translocation across a nanopore under the action of an externally applied transmembrane voltage V (in the absence of the initial flow field). Stretched (out-of-equilibrium) polyelectrolyte chain conformations are deliberately and systematically generated and used as initial conformations in translocation simulations. Independent simulations are performed to study the relaxation behavior of these stretched chains, and a comparison is made between the relaxation time scale and the mean translocation time (⟨τ⟩). For such artificially stretched initial states, ⟨τ⟩/N K < τ 0 , demonstrating the inapplicability of the quasi-equilibrium approximation. Nevertheless, we observe a scaling of ⟨τ⟩ ∼ 1/V over the entire range of chain stretching studied, in agreement with the predictions of the Fokker-Planck model. On the other hand, for realistic situations where the initial artificially imposed flow field is absent, a comparison of experimental data reported in the literature with the theory of polyelectrolyte dynamics reveals that the Zimm relaxation time (τ Zimm ) is shorter than the mean translocation time for several polymers including single stranded DNA (ssDNA), double stranded DNA (dsDNA), and

  11. Role of non-equilibrium conformations on driven polymer translocation

    NASA Astrophysics Data System (ADS)

    Katkar, H. H.; Muthukumar, M.

    2018-01-01

    One of the major theoretical methods in understanding polymer translocation through a nanopore is the Fokker-Planck formalism based on the assumption of quasi-equilibrium of polymer conformations. The criterion for applicability of the quasi-equilibrium approximation for polymer translocation is that the average translocation time per Kuhn segment, ⟨τ⟩/NK, is longer than the relaxation time τ0 of the polymer. Toward an understanding of conditions that would satisfy this criterion, we have performed coarse-grained three dimensional Langevin dynamics and multi-particle collision dynamics simulations. We have studied the role of initial conformations of a polyelectrolyte chain (which were artificially generated with a flow field) on the kinetics of its translocation across a nanopore under the action of an externally applied transmembrane voltage V (in the absence of the initial flow field). Stretched (out-of-equilibrium) polyelectrolyte chain conformations are deliberately and systematically generated and used as initial conformations in translocation simulations. Independent simulations are performed to study the relaxation behavior of these stretched chains, and a comparison is made between the relaxation time scale and the mean translocation time (⟨τ⟩). For such artificially stretched initial states, ⟨τ⟩/NK < τ0, demonstrating the inapplicability of the quasi-equilibrium approximation. Nevertheless, we observe a scaling of ⟨τ⟩ ˜ 1/V over the entire range of chain stretching studied, in agreement with the predictions of the Fokker-Planck model. On the other hand, for realistic situations where the initial artificially imposed flow field is absent, a comparison of experimental data reported in the literature with the theory of polyelectrolyte dynamics reveals that the Zimm relaxation time (τZimm) is shorter than the mean translocation time for several polymers including single stranded DNA (ssDNA), double stranded DNA (dsDNA), and synthetic

  12. MiT family translocation renal cell carcinoma.

    PubMed

    Argani, Pedram

    2015-03-01

    The MiT subfamily of transcription factors includes TFE3, TFEB, TFC, and MiTF. Gene fusions involving two of these transcription factors have been identified in renal cell carcinoma (RCC). The Xp11 translocation RCCs were first officially recognized in the 2004 WHO renal tumor classification, and harbor gene fusions involving TFE3. The t(6;11) RCCs harbor a specific Alpha-TFEB gene fusion and were first officially recognized in the 2013 International Society of Urologic Pathology (ISUP) Vancouver classification of renal neoplasia. These two subtypes of translocation RCC have many similarities. Both were initially described in and disproportionately involve young patients, though adult translocation RCC may overall outnumber pediatric cases. Both often have unusual and distinctive morphologies; the Xp11 translocation RCCs frequently have clear cells with papillary architecture and abundant psammomatous bodies, while the t(6;11) RCCs frequently have a biphasic appearance with both large and small epithelioid cells and nodules of basement membrane material. However, the morphology of these two neoplasms can overlap, with one mimicking the other. Both of these RCCs underexpress epithelial immunohistochemical markers like cytokeratin and epithelial membrane antigen (EMA) relative to most other RCCs. Unlike other RCCs, both frequently express the cysteine protease cathepsin k and often express melanocytic markers like HMB45 and Melan A. Finally, TFE3 and TFEB have overlapping functional activity as these two transcription factors frequently heterodimerize and bind to the same targets. Therefore, on the basis of clinical, morphologic, immunohistochemical, and genetic similarities, the 2013 ISUP Vancouver classification of renal neoplasia grouped these two neoplasms together under the heading of "MiT family translocation RCC." This review summarizes our current knowledge of these recently described RCCs. Copyright © 2015 Elsevier Inc. All rights reserved.

  13. Beyond textbook illustrations: Hand-held models of ordered DNA and protein structures as 3D supplements to enhance student learning of helical biopolymers.

    PubMed

    Jittivadhna, Karnyupha; Ruenwongsa, Pintip; Panijpan, Bhinyo

    2010-11-01

    Textbook illustrations of 3D biopolymers on printed paper, regardless of how detailed and colorful, suffer from its two-dimensionality. For beginners, computer screen display of skeletal models of biopolymers and their animation usually does not provide the at-a-glance 3D perception and details, which can be done by good hand-held models. Here, we report a study on how our students learned more from using our ordered DNA and protein models assembled from colored computer-printouts on transparency film sheets that have useful structural details. Our models (reported in BAMBED 2009), having certain distinguished features, helped our students to grasp various aspects of these biopolymers that they usually find difficult. Quantitative and qualitative learning data from this study are reported. Copyright © 2010 International Union of Biochemistry and Molecular Biology, Inc.

  14. The chromosomal risk in sperm from heterozygous Robertsonian translocation carriers is related to the sperm count and the translocation type.

    PubMed

    Ferfouri, Fatma; Selva, Jacqueline; Boitrelle, Florence; Gomes, Denise Molina; Torre, Antoine; Albert, Martine; Bailly, Marc; Clement, Patrice; Vialard, François

    2011-12-01

    To study the chromosomal risk in sperm from Robertsonian translocation (RobT) carriers as a function of the sperm count and translocation type. Prospective study. Departments of reproductive biology, cytogenetics, gynecology, and obstetrics. A total of 29 RobT patients (8 normozoospermic and 21 oligozoospermic) and 20 46,XY patients (10 normozoospermic and 10 oligozoospermic). Sperm fluorescence in situ hybridization with probes for translocation malsegregation and chromosome 13, 18, 21, X, and Y probes for studying the interchromosomal effect (ICE). Translocation malsegregation and ICE aneuploidy rates. In RobT carriers, the sperm translocation malsegregation rate was significantly lower in normozoospermic patients (9.7%) than in oligozoospermic patients (18.0%). Considering only oligozoospermic patients, sperm malsegregation rates were significantly lower for rob(14;21) than for rob(13;14) (11.4% vs. 18.9%). In turn, the rates were significantly lower for rob(13;14) than for rare RobTs (18.9% vs. 25.3%). In sperm from normozoospermic RobT, an ICE was suggested by higher chromosome 13 and 21 aneuploidy rates than in control sperm. Conversely, chromosome 13 and 21 sperm aneuploidy rates were lower in oligozoospermic RobT patients than in oligozoospermic 46,XY patients, but higher than in control subjects. Both translocation type and sperm count influence the RobT malsegregation risk. Of the chromosomes analyzed (13, 18, 21, X, and Y), only chromosomes 13 and 21 were found to be associated with an ICE. Relative to the RobT effect, idiopathic alterations in spermatogenesis in 46,XY patients appear to be more harmful for meiosis. Copyright © 2011 American Society for Reproductive Medicine. Published by Elsevier Inc. All rights reserved.

  15. Multispectral data compression through transform coding and block quantization

    NASA Technical Reports Server (NTRS)

    Ready, P. J.; Wintz, P. A.

    1972-01-01

    Transform coding and block quantization techniques are applied to multispectral aircraft scanner data, and digitized satellite imagery. The multispectral source is defined and an appropriate mathematical model proposed. The Karhunen-Loeve, Fourier, and Hadamard encoders are considered and are compared to the rate distortion function for the equivalent Gaussian source and to the performance of the single sample PCM encoder.

  16. Superfield Hamiltonian quantization in terms of quantum antibrackets

    NASA Astrophysics Data System (ADS)

    Batalin, Igor A.; Lavrov, Peter M.

    2016-04-01

    We develop a new version of the superfield Hamiltonian quantization. The main new feature is that the BRST-BFV charge and the gauge fixing Fermion are introduced on equal footing within the sigma model approach, which provides for the actual use of the quantum/derived antibrackets. We study in detail the generating equations for the quantum antibrackets and their primed counterparts. We discuss the finite quantum anticanonical transformations generated by the quantum antibracket.

  17. Flux Quantization in Aperiodic and Periodic Networks

    NASA Astrophysics Data System (ADS)

    Behrooz, Angelika

    The normal - superconducting phase boundary, T_{c}(H), of a periodic wire network shows periodic oscillations with period H _{o} = phi_ {o}/A due to flux quantization around the individual plaquettes (of area A) of the network. The magnetic flux quantum is phi_{o } = hc/2e. The phase boundary also shows fine structure at fields H = (p/q)H_{o} (p,q integers), where the flux vortices can form commensurate superlattices on the periodic substrate. We have studied the phase boundary of quasicrystalline, quasiperiodic and random networks. We have found that if a network is composed of two different tiles, whose areas are relatively irrational then the T_ {c}(H) curve shows large scale structure at fields that approximate flux quantization around the tiles, i.e. when the ratio of fluxoids contained in the large tiles to those in the small tiles is a rational approximant to the irrational area ratio. The phase boundaries of quasicrystalline and quasiperiodic networks show fine structure indicating the existence of commensurate vortex superlattices on these networks. No such fine structure is found on the random array. For a quasicrystal whose quasiperiodic long-range order is characterized by the irrational number tau the commensurate vortex lattices are all found at H = H_{o}| n + mtau| (n,m integers). We have found that the commensurate superlattices on quasicrystalline as well as on crystalline networks are related to the inflation symmetry. We propose a general definition of commensurability.

  18. Oxidation of alginate and pectate biopolymers by cerium(IV) in perchloric and sulfuric acid solutions: A comparative kinetic and mechanistic study.

    PubMed

    Fawzy, Ahmed

    2016-03-15

    The kinetics of oxidation of alginate (Alg) and pectate (Pec) carbohydrate biopolymers was studied by spectrophotometry in aqueous perchloric and sulfuric acid solutions at fixed ionic strengths and temperature. In both acids, the reactions showed a first order dependence on [Ce(IV)], whereas the orders with respect to biopolymer concentrations are less than unity. In perchloric acid, the reactions exhibited less than unit orders with respect to [H(+)] whereas those proceeded in sulfuric acid showed negative fractional-first order dependences on [H(+)]. The effect of ionic strength and dielectric constant was studied. Probable mechanistic schemes for oxidation reactions were proposed. In both acids, the final oxidation products were characterized as mono-keto derivatives of both biopolymers. The activation parameters with respect to the slow step of the mechanisms were computed and discussed. The rate laws were derived and the reaction constants involved in the different steps of the mechanisms were calculated. Copyright © 2015 Elsevier Ltd. All rights reserved.

  19. Biophysical and biochemical characteristics of cutin, a plant barrier biopolymer.

    PubMed

    Heredia, Antonio

    2003-03-17

    Cutin is a support biopolyester involved in waterproofing the leaves and fruits of higher plants, regulating the flow of nutrients among various plant cells and organs, and minimizing the deleterious impact of pathogens. Despite the complexity and intractable nature of this biopolymer, significant progress in chemical composition, molecular architecture and, more recently, biosynthesis have been made in the past 10 years. This review is focused in the description of these advances and their physiological impacts to improve our knowledge on plant cutin, an unusual topic in most plant physiology and biochemistry books and reviews.

  20. Obliquely propagating ion acoustic solitary structures in the presence of quantized magnetic field

    NASA Astrophysics Data System (ADS)

    Iqbal Shaukat, Muzzamal

    2017-10-01

    The effect of linear and nonlinear propagation of electrostatic waves have been studied in degenerate magnetoplasma taking into account the effect of electron trapping and finite temperature with quantizing magnetic field. The formation of solitary structures has been investigated by employing the small amplitude approximation both for fully and partially degenerate quantum plasma. It is observed that the inclusion of quantizing magnetic field significantly affects the propagation characteristics of the solitary wave. Importantly, the Zakharov-Kuznetsov equation under consideration has been found to allow the formation of compressive solitary structures only. The present investigation may be beneficial to understand the propagation of nonlinear electrostatic structures in dense astrophysical environments such as those found in white dwarfs.

  1. Robertsonian translocations

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    1993-12-31

    Chapter 27, describes the occurrence of Robertsonian translocations (RTs), which refer to the recombination of whole chromosome arms, in both monocentric and dicentric chromosomes. The nonrandom participation of acrocentric chromosomes in RTs is documented by various methods, including unbiased ascertainment and ascertainment through trisomy, infertility, unspecified mental retardation, and Prader-Willi syndrome. Causes of nonrandom participation of chromosomes in RTs is presented, as are the following topics: segregation in carriers of RTs and segregation in sperm cells of RT carriers, interchromosomal effects and conclusions. 48 refs., 3 figs., 2 tabs.

  2. Alignment of threat, effort, and perceived success in North American conservation translocations.

    PubMed

    Brichieri-Colombi, Typhenn A; Moehrenschlager, Axel

    2016-12-01

    The use of conservation translocations to mitigate human effects on biodiversity is increasing, but how these efforts are allocated remains unclear. Based on a comprehensive literature review and online author survey, we sought to determine the goals of translocation efforts, whether they focus on species and regions with high threat and likelihood of perceived success, and how success might be improved. We systematically searched the ISI Web of Knowledge and Academic Search Complete databases to determine the species and regions of conservation translocations and found 1863 articles on conservation translocations in the United States, Canada, Mexico, Central America, and Caribbean published from 1974 to 2013. We questioned 330 relevant authors to determine the motivation for translocations, how translocations were evaluated, and obstacles encountered. Conservation translocations in North America were geographically widespread (in 21 countries), increased in frequency over time for all animal classes (from 1 in 1974 to 84 in 2013), and included 279 different species. Reintroductions and reinforcements were more common in the United States than in Canada and Mexico, Central America, or the Caribbean, and their prevalence was correlated with the number of species at risk at national and state or provincial levels. Translocated species had a higher threat status at state and provincial levels than globally (International Union for Conservation of Nature Red List categorization), suggesting that translocations may have been motivated by regional priorities rather than global risk. Our survey of authors was consistent with these results; most translocations were requested, supported, or funded by government agencies and downlisting species at national or state or provincial levels was the main goal. Nonetheless, downlisting was the least reported measure of success, whereas survival and reproduction of translocated individuals were the most reported. Reported barriers

  3. Integrated systems for biopolymers and bioenergy production from organic waste and by-products: a review of microbial processes.

    PubMed

    Pagliano, Giorgia; Ventorino, Valeria; Panico, Antonio; Pepe, Olimpia

    2017-01-01

    Recently, issues concerning the sustainable and harmless disposal of organic solid waste have generated interest in microbial biotechnologies aimed at converting waste materials into bioenergy and biomaterials, thus contributing to a reduction in economic dependence on fossil fuels. To valorize biomass, waste materials derived from agriculture, food processing factories, and municipal organic waste can be used to produce biopolymers, such as biohydrogen and biogas, through different microbial processes. In fact, different bacterial strains can synthesize biopolymers to convert waste materials into valuable intracellular (e.g., polyhydroxyalkanoates) and extracellular (e.g., exopolysaccharides) bioproducts, which are useful for biochemical production. In particular, large numbers of bacteria, including Alcaligenes eutrophus , Alcaligenes latus , Azotobacter vinelandii , Azotobacter chroococcum , Azotobacter beijerincki , methylotrophs, Pseudomonas spp., Bacillus spp., Rhizobium spp., Nocardia spp., and recombinant Escherichia coli , have been successfully used to produce polyhydroxyalkanoates on an industrial scale from different types of organic by-products. Therefore, the development of high-performance microbial strains and the use of by-products and waste as substrates could reasonably make the production costs of biodegradable polymers comparable to those required by petrochemical-derived plastics and promote their use. Many studies have reported use of the same organic substrates as alternative energy sources to produce biogas and biohydrogen through anaerobic digestion as well as dark and photofermentation processes under anaerobic conditions. Therefore, concurrently obtaining bioenergy and biopolymers at a reasonable cost through an integrated system is becoming feasible using by-products and waste as organic carbon sources. An overview of the suitable substrates and microbial strains used in low-cost polyhydroxyalkanoates for biohydrogen and biogas

  4. Structure and Properties of Polysaccharide Based BioPolymer Gels

    NASA Astrophysics Data System (ADS)

    Prud'Homme, Robert K.

    2000-03-01

    Nature uses the pyranose ring as the basic building unit for a wideclass of biopolymers. Because of their biological origin these biopolymers naturally find application as food additives, rheology modifiers. These polymers range from being rigid skeletal material, such as cellulose that resist dissolution in water, to water soluble polymers, such as guar or carrageenan. The flexibility of the basic pyranose ring structure to provide materials with such a wide range of properties comes from the specific interactions that can be engineered by nature into the structure. We will present several examples of specific interactions for these systems: hydrogen bonding, hydrophobic interactions, and specific ion interactions. The relationship between molecular interations and rheology will be emphasized. Hydrogen bonding mediated by steric interference is used to control of solubility of starch and the rheology of guar gels. A more interesting example is the hydrogen bonding induced by chemical modification in konjac glucomannan that results in a gel that melts upon cooling. Hydrogen bonding interactions in xanthan lead to gel formation at very low polymer concentrations which is a result of the fine tuning of the polymer persistence length and total contour length. Given the function of xanthan in nature its molecular architecture has been optimized. Hydrophobic interactions in methylcellulose show a reverse temperature dependence arising from solution entropy. Carrageenan gelation upon the addition of specific cations will be addressed to show the interplay of polymer secondary structure on chemical reactivity. And finally the cis-hydroxyls on galactomannans permit crosslinking by a variety of metal ions some of which lead to "living gels" and some of which lead to permanently crosslinked networks.

  5. Characterization of Particle Translocation through Mucin Hydrogels

    PubMed Central

    Lieleg, Oliver; Vladescu, Ioana; Ribbeck, Katharina

    2010-01-01

    Abstract Biological functional entities surround themselves with selective barriers that control the passage of certain classes of macromolecules while rejecting others. A prominent example of such a selective permeability barrier is given by mucus. Mucus is a biopolymer-based hydrogel that lines all wet epithelial surfaces of the human body. It regulates the uptake of nutrients from our gastrointestinal system, adjusts itself with the menstrual cycle to control the passage of sperm, and shields the underlying cells from pathogens such as bacteria and viruses. In the case of drug delivery, the mucus barrier needs to be overcome for successful medical treatment. Despite its importance for both physiology and medical applications, the underlying principles which regulate the permeability of mucus remain enigmatic. Here, we analyze the mobility of microscopic particles in reconstituted mucin hydrogels. We show that electrostatic interactions between diffusing particles and mucin polymers regulate the permeability properties of reconstituted mucin hydrogels. As a consequence, various parameters such as particle surface charge and mucin density, and buffer conditions such as pH and ionic strength, can modulate the microscopic barrier function of the mucin hydrogel. Our findings suggest that the permeability of a biopolymer-based hydrogel such as native mucus can be tuned to a wide range of settings in different compartments of our bodies. PMID:20441741

  6. Miscoding-induced stalling of substrate translocation on the bacterial ribosome.

    PubMed

    Alejo, Jose L; Blanchard, Scott C

    2017-10-10

    Directional transit of the ribosome along the messenger RNA (mRNA) template is a key determinant of the rate and processivity of protein synthesis. Imaging of the multistep translocation mechanism using single-molecule FRET has led to the hypothesis that substrate movements relative to the ribosome resolve through relatively long-lived late intermediates wherein peptidyl-tRNA enters the P site of the small ribosomal subunit via reversible, swivel-like motions of the small subunit head domain within the elongation factor G (GDP)-bound ribosome complex. Consistent with translocation being rate-limited by recognition and productive engagement of peptidyl-tRNA within the P site, we now show that base-pairing mismatches between the peptidyl-tRNA anticodon and the mRNA codon dramatically delay this rate-limiting, intramolecular process. This unexpected relationship between aminoacyl-tRNA decoding and translocation suggests that miscoding antibiotics may impact protein synthesis by impairing the recognition of peptidyl-tRNA in the small subunit P site during EF-G-catalyzed translocation. Strikingly, we show that elongation factor P (EF-P), traditionally known to alleviate ribosome stalling at polyproline motifs, can efficiently rescue translocation defects arising from miscoding. These findings help reveal the nature and origin of the rate-limiting steps in substrate translocation on the bacterial ribosome and indicate that EF-P can aid in resuming translation elongation stalled by miscoding errors.

  7. Miscoding-induced stalling of substrate translocation on the bacterial ribosome

    PubMed Central

    Alejo, Jose L.; Blanchard, Scott C.

    2017-01-01

    Directional transit of the ribosome along the messenger RNA (mRNA) template is a key determinant of the rate and processivity of protein synthesis. Imaging of the multistep translocation mechanism using single-molecule FRET has led to the hypothesis that substrate movements relative to the ribosome resolve through relatively long-lived late intermediates wherein peptidyl-tRNA enters the P site of the small ribosomal subunit via reversible, swivel-like motions of the small subunit head domain within the elongation factor G (GDP)-bound ribosome complex. Consistent with translocation being rate-limited by recognition and productive engagement of peptidyl-tRNA within the P site, we now show that base-pairing mismatches between the peptidyl-tRNA anticodon and the mRNA codon dramatically delay this rate-limiting, intramolecular process. This unexpected relationship between aminoacyl-tRNA decoding and translocation suggests that miscoding antibiotics may impact protein synthesis by impairing the recognition of peptidyl-tRNA in the small subunit P site during EF-G–catalyzed translocation. Strikingly, we show that elongation factor P (EF-P), traditionally known to alleviate ribosome stalling at polyproline motifs, can efficiently rescue translocation defects arising from miscoding. These findings help reveal the nature and origin of the rate-limiting steps in substrate translocation on the bacterial ribosome and indicate that EF-P can aid in resuming translation elongation stalled by miscoding errors. PMID:28973849

  8. Clinicopathological features of Xp11.2 translocation renal cell carcinoma.

    PubMed

    Lim, Bumjin; You, Dalsan; Jeong, In Gab; Kwon, Taekmin; Hong, Sungwoo; Song, Cheryn; Cho, Yong Mee; Hong, Bumsik; Hong, Jun Hyuk; Ahn, Hanjong; Kim, Choung Soo

    2015-03-01

    Xp11.2 translocation renal cell carcinoma (RCC) is characterized by various translocations of the TFE3 transcription factor gene. These rare cancers occur predominantly in children and young adults. Here, we review the clinicopathological features of Xp11.2 translocation RCC. We identified 21 patients with Xp11.2 translocation RCC. We retrospectively analyzed patient characteristics, clinical manifestations, and specific pathological features to assess definitive diagnosis, surgical and systemic treatments, and clinical outcomes. The mean age at diagnosis was 43.4±20.0 years (range, 8-80 years; 8 males and 13 females). Eleven patients were incidentally diagnosed, nine patients presented with local symptoms, and one patient presented with systemic symptoms. The mean tumor size was 6.2±3.8 cm (range, 1.9-14 cm). At the time of diagnosis, 11, 1, and 5 patients showed stage I, II, and III, respectively. Four patients showed distant metastasis. At analysis, 15 patients were disease-free after a median follow-up period of 30.0 months. Four patients received target therapy but not effectively. Xp11 translocation RCC tends to develop in young patients with lymph node metastasis. Targeted therapy did not effectively treat our patients. Surgery is the only effective therapy for Xp11 translocation RCC, and further studies are needed to assess systemic therapy and long-term prognosis.

  9. Clinicopathological features of Xp11.2 translocation renal cell carcinoma

    PubMed Central

    Lim, Bumjin; You, Dalsan; Jeong, In Gab; Kwon, Taekmin; Hong, Sungwoo; Song, Cheryn; Cho, Yong Mee; Hong, Bumsik; Hong, Jun Hyuk; Ahn, Hanjong

    2015-01-01

    Purpose Xp11.2 translocation renal cell carcinoma (RCC) is characterized by various translocations of the TFE3 transcription factor gene. These rare cancers occur predominantly in children and young adults. Here, we review the clinicopathological features of Xp11.2 translocation RCC. Materials and Methods We identified 21 patients with Xp11.2 translocation RCC. We retrospectively analyzed patient characteristics, clinical manifestations, and specific pathological features to assess definitive diagnosis, surgical and systemic treatments, and clinical outcomes. Results The mean age at diagnosis was 43.4±20.0 years (range, 8-80 years; 8 males and 13 females). Eleven patients were incidentally diagnosed, nine patients presented with local symptoms, and one patient presented with systemic symptoms. The mean tumor size was 6.2±3.8 cm (range, 1.9-14 cm). At the time of diagnosis, 11, 1, and 5 patients showed stage I, II, and III, respectively. Four patients showed distant metastasis. At analysis, 15 patients were disease-free after a median follow-up period of 30.0 months. Four patients received target therapy but not effectively. Conclusions Xp11 translocation RCC tends to develop in young patients with lymph node metastasis. Targeted therapy did not effectively treat our patients. Surgery is the only effective therapy for Xp11 translocation RCC, and further studies are needed to assess systemic therapy and long-term prognosis. PMID:25763125

  10. Treatment of constraints in the stochastic quantization method and covariantized Langevin equation

    NASA Astrophysics Data System (ADS)

    Ikegami, Kenji; Kimura, Tadahiko; Mochizuki, Riuji

    1993-04-01

    We study the treatment of the constraints in the stochastic quantization method. We improve the treatment of the stochastic consistency condition proposed by Namiki et al. by suitably taking into account the Ito calculus. Then we obtain an improved Langevi equation and the Fokker-Planck equation which naturally leads to the correct path integral quantization of the constrained system as the stochastic equilibrium state. This treatment is applied to an O( N) non-linear α model and it is shown that singular terms appearing in the improved Langevin equation cancel out the σ n(O) divergences in one loop order. We also ascertain that the above Langevin equation, rewritten in terms of idependent variables, is actually equivalent to the one in the general-coordinate transformation covariant and vielbein-rotation invariant formalish.

  11. Quantization of higher abelian gauge theory in generalized differential cohomology

    NASA Astrophysics Data System (ADS)

    Szabo, R.

    We review and elaborate on some aspects of the quantization of certain classes of higher abelian gauge theories using techniques of generalized differential cohomology. Particular emphasis is placed on the examples of generalized Maxwell theory and Cheeger-Simons cohomology, and of Ramond-Ramond fields in Type II superstring theory and differential K-theory.

  12. Visually Tracking Translocations in Living Cells | Center for Cancer Research

    Cancer.gov

    Chromosomal translocations, the fusion of pieces of DNA from different chromosomes, are often observed in cancer cells and can even cause cancer. However, little is known about the dynamics and regulation of translocation formation. To investigate this critical process, Tom Misteli, Ph.D., in CCR’s Laboratory of Receptor Biology and Gene Expression, and his colleague Vassilis Roukos, Ph.D., developed a novel experimental system that allowed the researchers to see, for the first time, translocations form in individual, live cells.

  13. Large-scale translocation strategies for reintroducing red-cockaded woodpeckers

    Treesearch

    Daniel Saenz; Kristen A. Baum; Richard N. Conner; D. Craig Rudolph; Ralph Costa

    2002-01-01

    Translocation of wild birds is a potential conservation strategy for the endangered red-cockaded woodpecker (Picoides borealis). We developed and tested 8 large-scale translocation strategy models for a regional red-cockaded woodpecker reintroduction program. The purpose of the reintroduction program is to increase the number of red-cockaded...

  14. Influence of the Location of Attractive Polymer-Pore Interactions on Translocation Dynamics.

    PubMed

    Ghosh, Bappa; Chaudhury, Srabanti

    2018-01-11

    We probe the influence of polymer-pore interactions on the translocation dynamics using Langevin dynamics simulations. We investigate the effect of the strength and location of the polymer-pore interaction using nanopores that are partially charged either at the entry or the exit or on both sides of the pore. We study the change in the translocation time as a function of the strength of the polymer-pore interaction for a given chain length and under the effect of an externally applied field. Under a moderate driving force and a chain length longer than the length of the pore, the translocation time shows a nonmonotonic increase with an increase in the attractive interaction. Also, an interaction on the cis side of the pore can increase the translocation probability. In the presence of an external field and a strong attractive force, the translocation time for shorter chains is independent of the polymer-pore interaction at the entry side of the pore, whereas an interaction on the trans side dominates the translocation process. Our simulation results are rationalized by a qualitative analysis of the free energy landscape for polymer translocation.

  15. Evaluating Stress Physiology and Parasite Infection Parameters in the Translocation of Critically Endangered Woylies (Bettongia penicillata).

    PubMed

    Hing, Stephanie; Northover, Amy S; Narayan, Edward J; Wayne, Adrian F; Jones, Krista L; Keatley, Sarah; Thompson, R C Andrew; Godfrey, Stephanie S

    2017-03-01

    Translocation can be stressful for wildlife. Stress may be important in fauna translocation because it has been suggested that it can exacerbate the impact of infectious disease on translocated wildlife. However, few studies explore this hypothesis by measuring stress physiology and infection indices in parallel during wildlife translocations. We analysed faecal cortisol metabolite (FCM) concentration and endoparasite parameters (nematodes, coccidians and haemoparasites) in a critically endangered marsupial, the woylie (Bettongia penicillata), 1-3 months prior to translocation, at translocation, and 6 months later. FCM for both translocated and resident woylies was significantly higher after translocation compared to before or at translocation. In addition, body condition decreased with increasing FCM after translocation. These patterns in host condition and physiology may be indicative of translocation stress or stress associated with factors independent of the translocation. Parasite factors also influenced FCM in translocated woylies. When haemoparasites were detected, there was a significant negative relationship between strongyle egg count and FCM. This may reflect the influence of glucocorticoids on the immune response to micro- and macro-parasites. Our results indicate that host physiology and infection patterns can change significantly during translocation, but further investigation is required to determine how these patterns influence translocation success.

  16. The Effects of Biopolymer Encapsulation on Total Lipids and Cholesterol in Egg Yolk during in Vitro Human Digestion

    PubMed Central

    Hur, Sun-Jin; Kim, Young-Chan; Choi, Inwook; Lee, Si-Kyung

    2013-01-01

    The purpose of this study was to examine the effect of biopolymer encapsulation on the digestion of total lipids and cholesterol in egg yolk using an in vitro human digestion model. Egg yolks were encapsulated with 1% cellulose, pectin, or chitosan. The samples were then passed through an in vitro human digestion model that simulated the composition of mouth saliva, stomach acid, and the intestinal juice of the small intestine by using a dialysis tubing system. The change in digestion of total lipids was monitored by confocal fluorescence microscopy. The digestion rate of total lipids and cholesterol in all egg yolk samples dramatically increased after in vitro human digestion. The digestion rate of total lipids and cholesterol in egg yolks encapsulated with chitosan or pectin was reduced compared to the digestion rate of total lipids and cholesterol in other egg yolk samples. Egg yolks encapsulated with pectin or chitosan had lower free fatty acid content, and lipid oxidation values than samples without biopolymer encapsulation. Moreover, the lipase activity decreased, after in vitro digestion, in egg yolks encapsulated with biopolymers. These results improve our understanding of the effects of digestion on total lipids and cholesterol in egg yolk within the gastrointestinal tract. PMID:23965957

  17. Effects of Prunus mume Sieb. et Zucc. extract and its biopolymer encapsulation on a mouse model of colitis.

    PubMed

    Lee, Seung Yun; Lee, Seung-Jae; Hur, Sun Jin

    2017-01-01

    Prunus mume suppresses various diseases caused by inflammation response and exhibits antioxidant and free radical-scavenging activities. Therefore this study determined the effect of an aqueous P. mume (PM) extract in a mouse colitis model and investigated the value of biopolymer encapsulation, facilitating targeted delivery to the colon. Colitis was induced by administration of 30 g kg -1 dextran sulfate sodium to male BALB/c mice for 7 days prior to treatment with vehicle, 50 mg kg -1 PM extract or biopolymer-encapsulated PM extract, or 50 mg kg -1 sulfasalazine. Histological examination of the colon in BALB/c mice showed epithelial destruction and mucosal infiltration of inflammatory cells. These changes were attenuated in PM-treated mice, which had lower levels of inflammatory cytokines, cyclooxygenase 2 and immunoglobulins (IgA, IgM and IgE) compared with the vehicle-treated colitis group. The PM extract showed concentration-dependent radical scavenging and superoxide dismutase-like antioxidant activities. These results indicated that the effects of the PM extract on colitis were not influenced by biopolymer encapsulation and that this PM extract could be a potential therapeutic agent for inflammatory bowel disease. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

  18. Uptake and translocation of hexachlorobenzene: Oilpumpkin and sunflower

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    1993-10-01

    The uptake of hexachlorobenzene (HCB) and its translocation to seeds were studied with oil pumpkin and sunflower plants. Open air pot experiments were conducted with soil treated with different amounts of HCB. 14C-labelled HCB was used in solution culture experiments with young plants to investigate the distribution of HCB within the plants. During the experiments the contaminant was taken up by the root system of pumkin plant and translocated intensity to the reproductive organs. Autoradiographic pictures of crossections of stems and young fruits confirm this. Such translocation mechanism was not found in sunflower. Nevertheless it can be assumed that undermore » field conditions the uptake of vaporized HCB from contamination soil by foliage and fruits of oil pumpkin is the main pathway of contamination.« less

  19. Ribosomal Translocation: One Step Closer to the Molecular Mechanism

    PubMed Central

    Shoji, Shinichiro; Walker, Sarah E.; Fredrick, Kurt

    2010-01-01

    Protein synthesis occurs in ribosomes, the targets of numerous antibiotics. How these large and complex machines read and move along mRNA have proven to be challenging questions. In this Review, we focus on translocation, the last step of the elongation cycle in which movement of tRNA and mRNA is catalyzed by elongation factor G. Translocation entails large-scale movements of the tRNAs and conformational changes in the ribosome that require numerous tertiary contacts to be disrupted and reformed. We highlight recent progress toward elucidating the molecular basis of translocation and how various antibiotics influence tRNA–mRNA movement. PMID:19173642

  20. Quantized Algebra I Texts

    NASA Astrophysics Data System (ADS)

    DeBuvitz, William

    2014-03-01

    I am a volunteer reader at the Princeton unit of "Learning Ally" (formerly "Recording for the Blind & Dyslexic") and I recently discovered that high school students are introduced to the concept of quantization well before they take chemistry and physics. For the past few months I have been reading onto computer files a popular Algebra I textbook, and I was surprised and dismayed by how it treated simultaneous equations and quadratic equations. The coefficients are always simple integers in examples and exercises, even when they are related to physics. This is probably a good idea when these topics are first presented to the students. It makes it easy to solve simultaneous equations by the method of elimination of a variable. And it makes it easy to solve some quadratic equations by factoring. The textbook also discusses the method of substitution for linear equations and the use of the quadratic formula, but only with simple integers.

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