Utility of a stressed-SNP real-time PCR assay for the rapid identification of measles vaccine strain in patient samples.

PubMed

Tran, Thomas; Kostecki, Renata; Catton, Michael; Druce, Julian

2018-05-09

Rapid differentiation of wild-type measles virus from measles vaccine strains is crucial during a measles outbreak and in a measles elimination setting. A real-time RT-PCR for the rapid detection of measles vaccine strains was developed with high specificity and greater sensitivity than when compared to traditional measles genotyping methods. The "stressed" minor grove binder TaqMan probe design approach achieves specificity to vaccine strains only, without compromising sensitivity. This assay has proven to be extremely useful in outbreak settings, without requiring sequence genotyping, for over 4 years at the Regional Measles Reference Laboratory for the Western Pacific Region. Copyright © 2018 Tran et al.

40 CFR 81.214 - Black Hills-Rapid City Intrastate Air Quality Control Region.

Code of Federal Regulations, 2010 CFR

2010-07-01

... 40 Protection of Environment 17 2010-07-01 2010-07-01 false Black Hills-Rapid City Intrastate Air... Air Quality Control Regions § 81.214 Black Hills-Rapid City Intrastate Air Quality Control Region. The Rapid City Intrastate Air Quality Control Region (South Dakota) has been renamed the Black Hills-Rapid...

40 CFR 81.214 - Black Hills-Rapid City Intrastate Air Quality Control Region.

Code of Federal Regulations, 2011 CFR

2011-07-01

... 40 Protection of Environment 17 2011-07-01 2011-07-01 false Black Hills-Rapid City Intrastate Air... Air Quality Control Regions § 81.214 Black Hills-Rapid City Intrastate Air Quality Control Region. The Rapid City Intrastate Air Quality Control Region (South Dakota) has been renamed the Black Hills-Rapid...

Reading skill and structural brain development

PubMed Central

Houston, S.M.; Lebel, C.; Katzir, T.; Manis, F.R.; Kan, E.; Rodriguez, G.R.; Sowell, E.R.

2014-01-01

Reading is a learned skill that is likely influenced by both brain maturation and experience. Functional imaging studies have identified brain regions important for skilled reading, but the structural brain changes that co-occur with reading acquisition remain largely unknown. We investigated maturational volume changes in brain reading regions and their association with performance on reading measures. Sixteen typically developing children (5-15 years old, 8 male, mean age of sample=10.06 ±3.29) received two magnetic resonance imaging (MRI) scans, (mean inter-scan interval =2.19 years), and were administered a battery of cognitive measures. Volume changes between time points in five bilateral cortical regions of interest were measured, and assessed for relationships to three measures of reading. Better baseline performances on measures of word reading, fluency and rapid naming, independent of age and total cortical gray matter volume change, were associated with volume decrease in the left inferior parietal cortex. Better baseline performance on a rapid naming measure was associated with volume decrease in the left inferior frontal region. These results suggest that children who are better readers, and who perhaps read more than less skilled readers, exhibit different development trajectories in brain reading regions. Understanding relationships between reading performance, reading experience and brain maturation trajectories may help with the development and evaluation of targeted interventions. PMID:24407200

The demography of the Arab Republic of Egypt: population issues and policies.

PubMed

Holmberg, I

1981-01-01

The author examines some aspects of population growth in Egypt. Recent trends in fertility, mortality, urbanization, industrialization, regional development, and internal migation are described. The demographic and socioeconomic consequences of rapid population growth are considered, and the possibility of formulating government policies to alleviate problems associated with rapid growth is discussed

Indexcov: fast coverage quality control for whole-genome sequencing.

PubMed

Pedersen, Brent S; Collins, Ryan L; Talkowski, Michael E; Quinlan, Aaron R

2017-11-01

The BAM and CRAM formats provide a supplementary linear index that facilitates rapid access to sequence alignments in arbitrary genomic regions. Comparing consecutive entries in a BAM or CRAM index allows one to infer the number of alignment records per genomic region for use as an effective proxy of sequence depth in each genomic region. Based on these properties, we have developed indexcov, an efficient estimator of whole-genome sequencing coverage to rapidly identify samples with aberrant coverage profiles, reveal large-scale chromosomal anomalies, recognize potential batch effects, and infer the sex of a sample. Indexcov is available at https://github.com/brentp/goleft under the MIT license. © The Authors 2017. Published by Oxford University Press.

Sequence characterization of heat shock protein gene of Cyclospora cayetanensis isolates from Nepal, Mexico, and Peru.

PubMed

Sulaiman, Irshad M; Torres, Patricia; Simpson, Steven; Kerdahi, Khalil; Ortega, Ynes

2013-04-01

We have described the development of a 2-step nested PCR protocol based on the characterization of the 70-kDa heat shock protein (HSP70) gene for rapid detection of the human-pathogenic Cyclospora cayetanensis parasite. We tested and validated these newly designed primer sets by PCR amplification followed by nucleotide sequencing of PCR-amplified HSP70 fragments belonging to 16 human C. cayetanensis isolates from 3 different endemic regions that include Nepal, Mexico, and Peru. No genetic polymorphism was observed among the isolates at the characterized regions of the HSP70 locus. This newly developed HSP70 gene-based nested PCR protocol provides another useful genetic marker for the rapid detection of C. cayetanensis in the future.

Guatemala's ministry of health rapid response team manuals.

PubMed

Hernandez, Luis; Hanson, Kimberly M; Martel, Lise D

2014-01-01

The function of public health rapid response teams (RRTs) is to quickly identify, investigate, and control an outbreak before it can spread. The Central America Regional Office in Guatemala provided assistance to the Guatemalan Ministry of Health and Social Assistance (MSPAS) to develop RRT manuals at the district and regional levels. The manuals are divided into 4 sections: background, activity lists, standard operating procedures, and annexes. The manuals outline Guatemala's RRT members' responsibilities and will be tested in the near future through tabletop exercises. The development of the manuals is a concrete and significant step toward the attainment of Guatemala's IHR goals and should be integrated into a larger emergency management system to promote "a world safe and secure from global health threats posed by infectious diseases."

Driving mechanism and sources of groundwater nitrate contamination in the rapidly urbanized region of south China

NASA Astrophysics Data System (ADS)

Zhang, Qianqian; Sun, Jichao; Liu, Jingtao; Huang, Guanxing; Lu, Chuan; Zhang, Yuxi

2015-11-01

Nitrate contamination of groundwater has become an environmental problem of widespread concern in China. We collected 899 groundwater samples from a rapidly urbanized area, in order to identify the main sources and driving mechanisms of groundwater nitrate contamination. The results showed that the land use has a significant effect on groundwater nitrate concentration (P < 0.001). Landfill leakage was an important source of nitrate in groundwater in the PRD (Pearl River Delta) region, since landfill yielded the highest nitrate concentration (38.14 mg/L) and the highest ratio of exceeded standard (42.50%). In this study, the driving mechanism of groundwater nitrate contamination was determined to be urban construction and the secondary and tertiary industrial development, and population growth. This study revealed that domestic wastewater and industrial wastewater were the main sources of groundwater nitrate pollution. Therefore, the priority method for relieving groundwater nitrate contamination is to control the random discharge of domestic and industrial wastewater in regions undergoing rapid urbanization. Capsule abstract. The main driving mechanism of groundwater nitrate contamination was determined to be urban construction and the secondary and tertiary industrial development, and population growth.

Driving mechanism and sources of groundwater nitrate contamination in the rapidly urbanized region of south China.

PubMed

Zhang, Qianqian; Sun, Jichao; Liu, Jingtao; Huang, Guanxing; Lu, Chuan; Zhang, Yuxi

2015-11-01

Nitrate contamination of groundwater has become an environmental problem of widespread concern in China. We collected 899 groundwater samples from a rapidly urbanized area, in order to identify the main sources and driving mechanisms of groundwater nitrate contamination. The results showed that the land use has a significant effect on groundwater nitrate concentration (P<0.001). Landfill leakage was an important source of nitrate in groundwater in the PRD (Pearl River Delta) region, since landfill yielded the highest nitrate concentration (38.14 mg/L) and the highest ratio of exceeded standard (42.50%). In this study, the driving mechanism of groundwater nitrate contamination was determined to be urban construction and the secondary and tertiary industrial development, and population growth. This study revealed that domestic wastewater and industrial wastewater were the main sources of groundwater nitrate pollution. Therefore, the priority method for relieving groundwater nitrate contamination is to control the random discharge of domestic and industrial wastewater in regions undergoing rapid urbanization. Capsule abstract. The main driving mechanism of groundwater nitrate contamination was determined to be urban construction and the secondary and tertiary industrial development, and population growth. Copyright © 2015 Elsevier B.V. All rights reserved.

Creating affordable Internet map server applications for regional scale applications.

PubMed

Lembo, Arthur J; Wagenet, Linda P; Schusler, Tania; DeGloria, Stephen D

2007-12-01

This paper presents an overview and process for developing an Internet Map Server (IMS) application for a local volunteer watershed group using an Internal Internet Map Server (IIMS) strategy. The paper illustrates that modern GIS architectures utilizing an internal Internet map server coupled with a spatial SQL command language allow for rapid development of IMS applications. The implication of this approach means that powerful IMS applications can be rapidly and affordably developed for volunteer organizations that lack significant funds or a full time information technology staff.

Construction of Multimodal Transport Information Platform

NASA Astrophysics Data System (ADS)

Wang, Ya; Cheng, Yu; Zhao, Zhi

2018-06-01

With the rapid development of economy, the volume of transportation in China is increasing, the opening process of the market is accelerating, the scale of enterprises is expanding, the service quality is being improved, and the container multimodal transport is developing continuously.The hardware infrastructure of container multimodal transport is improved obviously, but the network platform construction of multimodal transport is still insufficient.Taking Shandong region of China as an example, the present situation of container multimodal transport in Shandong area can no longer meet the requirement of rapid development of container, and the construction of network platform needs to be solved urgently. Therefore, this paper will briefly describe the conception of construction of multimodal transport network platform in Shandong area.In order to achieve the rapid development of multimodal transport.

Rapid tests for diagnosis of leptospirosis: current tools and emerging technologies.

PubMed

Picardeau, Mathieu; Bertherat, Eric; Jancloes, Michel; Skouloudis, Andreas N; Durski, Kara; Hartskeerl, Rudy A

2014-01-01

Leptospirosis is an emerging zoonosis with a worldwide distribution but is more commonly found in impoverished populations in developing countries and tropical regions with frequent flooding. The rapid detection of leptospirosis is a critical step to effectively manage the disease and to control outbreaks in both human and animal populations. Therefore, there is a need for accurate and rapid diagnostic tests and appropriate surveillance and alert systems to identify outbreaks. This review describes current in-house methods and commercialized tests for the rapid diagnosis of acute leptospirosis. It focuses on diagnostic tests that can be performed with minimal training and limited equipment in less-developed and newly industrialized countries, particularly in resource-limited settings and with results in minutes to less than 4 hours. We also describe recent technological advances in the field of diagnostic tests that could allow for the development of innovative rapid tests in the near future. © 2013 Elsevier Inc. All rights reserved.

Accuracy of AccessBio Immunoglobulin M and Total Antibody Rapid Immunochromatographic Assays for the Diagnosis of Acute Scrub Typhus Infection

DTIC Science & Technology

2010-02-01

archived samples, we assessed the diagnostic capacity of a rapid immunochromatographic test (ICT) for the detection of Orientia tsutsugamushi IgM and...illness in the Asia-Pacific region. As very few health facilities have accessible accurate diagnostic tests , the diagnosis of scrub fever must be based...develop- ment of rapid , diagnostic tests by the use of immunochromato- graphic test (ICf) technologies has provided a mechanism for point-of-care

Lake Urmia (Iran): can future socio-ecologically motivated river basin management restore lake water levels in an arid region with extensive agricultural development?

NASA Astrophysics Data System (ADS)

Fazel, Nasim; Berndtsson, Ronny; Bertacchi Uvo, Cintia; Klove, Bjorn; Madani, Kaveh

2015-04-01

Lake Urmia, one of the world's largest hyper saline lakes located in northwest of Iran, is a UNESCO Biosphere Reserve and Ramsar site, protected as a national park and, supports invaluable and unique biodiversity and related ecosystem services for the region's 6.5 million inhabitants. Due to increased development of the region's water resources for agriculture and industry and to a certain extent climate change, the lake has started to shrink dramatically since 1995 and now is holding less than 30 percent of its volume. Rapid development in agricultural sector and land-use changes has resulted in immense construction of dams and water diversions in almost all lake feeding rivers, intensifying lake shrinking, increasing salinity and degrading its ecosystem. Recently, lake's cultural and environmental importance and social pressure has raised concerns and brought government attention to the lake restoration plans. Along with poor management, low yield agriculture as the most water consuming activity in the region with, rapid, insufficient development is one of the most influential drivers in the lake desiccation. Part of the lake restoration plans in agricultural sector is to restrict the agricultural areas in the main feeding river basins flowing mostly in the southern part of the lake and decreasing the agricultural water use in this area. This study assess the efficiency and effectiveness of the proposed plans and its influence on the lake level rise and its impacts on economy in the region using a system dynamics model developed for the Lake consist of hydrological and agro-economical sub-systems. The effect of decrease in agricultural area in the region on GDP and region economy was evaluated and compared with released water contribution in lake level rise for a five year simulation period.

History, Current Situation, and Future Development of Endoscopic Neurosurgery in China.

PubMed

Li, Chuzhong; Zhu, Haibo; Zong, Xuyi; Wang, Xinsheng; Gui, Songbai; Zhao, Peng; Zhang, Yazhuo

2018-02-01

During the past few decades, Chinese endoscopic neurosurgery has rapidly developed in synchrony with the rest of the world. The aim of this article is to review the development of Chinese endoscopic neurosurgery, including its birth, growth, current situation, and prospects. The history of Chinese endoscopic neurosurgery development can be divided into 3 stages: cognition and initial stage (1964-1995), exploration and maturity stage (1995-2006), and rapid development and promotion stage (2006-present). In the first stage, we mainly began to become aware of endoscopic neurosurgery from the translation and review of literature. In the mid to late 1990s, Chinese neurosurgery pioneers began using neuroendoscopic techniques. In the following decade, many leading neurosurgeons made persistent efforts to push the development of Chinese endoscopic neurosurgery forward, focusing on advocating for and promoting and popularizing neuroendoscopic technology. In the rapid development and promotion stage, many representative national and regional neurosurgical centers became skilled and efficient in the application of neuroendoscopic technology and became new advocates of the technology. The number of cases, level of technology, and treatment effectiveness are gradually nearing international standards. However, future development requires promotion of balanced development to decrease regional disparities, further strengthen international exchanges, follow the latest developments, and constantly innovate for continuous improvement. Following the dramatic efforts of several pioneers, development of Chinese endoscopic neurosurgery has been considerable, and it has become an important component of neurosurgery worldwide. Copyright © 2017 Elsevier Inc. All rights reserved.

Urbanization and Slum Formation

PubMed Central

Phua, Kai Hong

2007-01-01

The formation of slums need not be inevitable with rapid urbanization. Such an argument appears to be contradicted by evidence of large slum populations in a large number of developing countries and particularly in rapidly urbanizing regions like Asia. The evidence discussed suggests that city authorities faced with rapid urban development lack the capacity to cope with the diverse demands for infrastructural provision to meet economic and social needs. Not only are strategic planning and intervention major issues in agenda to manage rapid urbanization, but city governments are not effectively linking the economic development trajectory to implications for urban growth and, hence, housing needs. In the following discussion, a case study is presented in support of the argument that city governments have to first recognize and then act to establish the link that is crucial between economic development, urban growth, and housing. This is the agendum that has been largely neglected by city and national governments that have been narrowly focused on economic growth with the consequent proliferation of slum formation as a housing solution. PMID:17387618

Projected Regional Climate in 2025 Due to Urban Growth

NASA Technical Reports Server (NTRS)

Shepherd, J. Marshall; Manyin, Michael; Messen, Dmitry

2005-01-01

By 2025, 60 to 80 percent of the world s population will live in urban environments. Additionally, the following facts published by the United Nations further illustrates how cities will evolve in the future. Urban areas in the developing world are growing very rapidly. The urban growth rate will continue to be particularly rapid in the urban areas of less developed regions, averaging 2.4 per cent per year during 2000-2030, consistent with a doubling time of 29 years. The urbanization process will continue worldwide. The concentration of population in cities is expected to continue so that, by 2030, 84 percent of the inhabitants of more developed countries will be urban dwellers. Urbanization impacts the whole hierarchy of human settlements. In 2000,24.8 per cent of the world population lived in urban settlements with fewer than 500,000 inhabitants and by 2015 that proportion will likely rise to 27.1 per cent.

Improving Technical Vocational Education and Training in the Kurdistan Region--Iraq

ERIC Educational Resources Information Center

Constant, Louay; Culbertson, Shelly; Stasz, Cathleen; Vernez, Georges

2014-01-01

As Iraq's Kurdistan region develops rapidly, it is creating jobs that require a solid education and technical skills. The government has launched an ambitious reform of basic and secondary education to increase its quality and has expanded opportunities for tertiary technical and university education. But expansion of secondary vocational…

Spatiotemporal urban land use changes in the Changzhutan Region of Hunan Province in China

USDA-ARS?s Scientific Manuscript database

The Changzhutan region in the north-central part of Hunan Province in China has experienced a rapid urbanization in the past few decades that has led to substantial changes in its environment. In 2007, the National Development and Reform Commission of China designated the metropolitan district of Ch...

Guatemala’s Ministry of Health Rapid Response Team Manuals

PubMed Central

Hernandez, Luis; Hanson, Kimberly M.; Martel, Lise D.

2017-01-01

The function of public health rapid response teams (RRTs) is to quickly identify, investigate, and control an outbreak before it can spread. The Central America Regional Office in Guatemala provided assistance to the Guatemalan Ministry of Health and Social Assistance (MSPAS) to develop RRT manuals at the district and regional levels. The manuals are divided into 4 sections: background, activity lists, standard operating procedures, and annexes. The manuals outline Guatemala’s RRT members’ responsibilities and will be tested in the near future through tabletop exercises. The development of the manuals is a concrete and significant step toward the attainment of Guatemala’s IHR goals and should be integrated into a larger emergency management system to promote “a world safe and secure from global health threats posed by infectious diseases.” PMID:25254918

[Assessment of 10 years of memory consultations in the Franche-Comté: Description and analysis of the RAPID regional database].

PubMed

Bereau, M; Sylvestre, G; Mauny, F; Puyraveau, M; Baudier, F; Magnin, E; Berger, E; Vandel, P; Galmiche, J; Chopard, G

2015-09-01

The aim of this study was to evaluate the impact, on a regional scale (Franche-Comté), of 3 National Alzheimer care plans, particularly concerning the development of the offer of care management by clinicians as well as the panel of diagnoses concerned. Data on sociodemographic, neuropsychological and diagnostic characteristics were retrieved from the RAPID regional database between 1st January 2003 and 31st December 2012. These analyses focused exclusively on patients who had an initial consultation (n=12,017) during the same period. The existence of a previously established health network capable of carrying out governmental health plans has produced an effective interface between regional administrative structures responsible for the implementation of these plans and health professionals responsible for carrying out them out. This network study, the use of a battery of tests and a common software database have enabled the development of patient care management throughout the Franche-Comté region. It also showed the diversification of diagnoses mentioned over the past years as well as changes in clinical practices on how to address the issue of cognitive impairment. Copyright © 2015 Elsevier Masson SAS. All rights reserved.

REGIONAL ASSESSMENT OF WETLAND ECOLOGICAL CONDITION -- ISSUES AND CHALLENGES

EPA Science Inventory

Most work on wetland assessment has focused on the development of methods, however, effective assessment involves more than having a method. In a 2004 review of rapid assessment methods, Fennessey et al. recommended key considerations when adopting existing methods or developing...

Novel Multiplex Oligonucleotide-Conjugated Bead Suspension Array for Rapid Identification of Enterovirus 71 Subgenogroups▿ §

PubMed Central

Wu, Y.; Tan, E. L.; Yeo, A.; Chan, K. P.; Nishimura, H.; Cardosa, M. J.; Poh, C. L.; Quak, S. H.; Chow, Vincent T.

2011-01-01

A high-throughput multiplex bead suspension array was developed for the rapid subgenogrouping of EV71 strains, based on single nucleotide polymorphisms observed within the VP1 region with a high sensitivity as low as 1 PFU. Of 33 viral isolates and 55 clinical samples, all EV71 strains were successfully detected and correctly subgenogrouped. PMID:21084510

Evaluation of urban sprawl and urban landscape pattern in a rapidly developing region.

PubMed

Lv, Zhi-Qiang; Dai, Fu-Qiang; Sun, Cheng

2012-10-01

Urban sprawl is a worldwide phenomenon happening particularly in rapidly developing regions. A study on the spatiotemporal characteristics of urban sprawl and urban pattern is useful for the sustainable management of land management and urban land planning. The present research explores the spatiotemporal dynamics of urban sprawl in the context of a rapid urbanization process in a booming economic region of southern China from 1979 to 2005. Three urban sprawl types are distinguished by analyzing overlaid urban area maps of two adjacent study years which originated from the interpretation of remote sensed images and vector land use maps. Landscape metrics are used to analyze the spatiotemporal pattern of urban sprawl for each study period. Study results show that urban areas have expanded dramatically, and the spatiotemporal landscape pattern configured by the three sprawl types changed obviously. The different sprawl type patterns in five study periods have transformed significantly, with their proportions altered both in terms of quantity and of location. The present research proves that urban sprawl quantification and pattern analysis can provide a clear perspective of the urbanization process during a long time period. Particularly, the present study on urban sprawl and sprawl patterns can be used by land use and urban planners.

Experimental evidence of low-density liquid water upon rapid decompression

PubMed Central

Lin, Chuanlong; Smith, Jesse S.; Sinogeikin, Stanislav V.; Shen, Guoyin

2018-01-01

Water is an extraordinary liquid, having a number of anomalous properties which become strongly enhanced in the supercooled region. Due to rapid crystallization of supercooled water, there exists a region that has been experimentally inaccessible for studying deeply supercooled bulk water. Using a rapid decompression technique integrated with in situ X-ray diffraction, we show that a high-pressure ice phase transforms to a low-density noncrystalline (LDN) form upon rapid release of pressure at temperatures of 140–165 K. The LDN subsequently crystallizes into ice-Ic through a diffusion-controlled process. Together with the change in crystallization rate with temperature, the experimental evidence indicates that the LDN is a low-density liquid (LDL). The measured X-ray diffraction data show that the LDL is tetrahedrally coordinated with the tetrahedral network fully developed and clearly linked to low-density amorphous ices. On the other hand, there is a distinct difference in structure between the LDL and supercooled water or liquid water in terms of the tetrahedral order parameter. PMID:29440411

Integrating global socio-economic influences into a regional land use change model for China

NASA Astrophysics Data System (ADS)

Xu, Xia; Gao, Qiong; Peng, Changhui; Cui, Xuefeng; Liu, Yinghui; Jiang, Li

2014-03-01

With rapid economic development and urbanization, land use in China has experienced huge changes in recent years; and this will probably continue in the future. Land use problems in China are urgent and need further study. Rapid land-use change and economic development make China an ideal region for integrated land use change studies, particularly the examination of multiple factors and global-regional interactions in the context of global economic integration. This paper presents an integrated modeling approach to examine the impact of global socio-economic processes on land use changes at a regional scale. We develop an integrated model system by coupling a simple global socio-economic model (GLOBFOOD) and regional spatial allocation model (CLUE). The model system is illustrated with an application to land use in China. For a given climate change, population growth, and various socio-economic situations, a global socio-economic model simulates the impact of global market and economy on land use, and quantifies changes of different land use types. The land use spatial distribution model decides the type of land use most appropriate in each spatial grid by employing a weighted suitability index, derived from expert knowledge about the ecosystem state and site conditions. A series of model simulations will be conducted and analyzed to demonstrate the ability of the integrated model to link global socioeconomic factors with regional land use changes in China. The results allow an exploration of the future dynamics of land use and landscapes in China.

Community Colleges and Economic Development.

ERIC Educational Resources Information Center

Gallego, Augustine

This document argues that regions that sustain economic growth or recover rapidly from economic slumps are often the same communities that have aggressively developed and continue to strengthen collaborations with business and industry, universities, community colleges, high schools, and other key public and private sector entities. In San Diego…

Biofidelic white matter heterogeneity decreases computational model predictions of white matter strains during rapid head rotations.

PubMed

Maltese, Matthew R; Margulies, Susan S

2016-11-01

The finite element (FE) brain model is used increasingly as a design tool for developing technology to mitigate traumatic brain injury. We developed an ultra high-definition FE brain model (>4 million elements) from CT and MRI scans of a 2-month-old pre-adolescent piglet brain, and simulated rapid head rotations. Strain distributions in the thalamus, coronal radiata, corpus callosum, cerebral cortex gray matter, brainstem and cerebellum were evaluated to determine the influence of employing homogeneous brain moduli, or distinct experimentally derived gray and white matter property representations, where some white matter regions are stiffer and others less stiff than gray matter. We find that constitutive heterogeneity significantly lowers white matter deformations in all regions compared with homogeneous properties, and should be incorporated in FE model injury prediction.

Rapid earthquake hazard and loss assessment for Euro-Mediterranean region

NASA Astrophysics Data System (ADS)

Erdik, Mustafa; Sesetyan, Karin; Demircioglu, Mine; Hancilar, Ufuk; Zulfikar, Can; Cakti, Eser; Kamer, Yaver; Yenidogan, Cem; Tuzun, Cuneyt; Cagnan, Zehra; Harmandar, Ebru

2010-10-01

The almost-real time estimation of ground shaking and losses after a major earthquake in the Euro-Mediterranean region was performed in the framework of the Joint Research Activity 3 (JRA-3) component of the EU FP6 Project entitled "Network of Research Infra-structures for European Seismology, NERIES". This project consists of finding the most likely location of the earthquake source by estimating the fault rupture parameters on the basis of rapid inversion of data from on-line regional broadband stations. It also includes an estimation of the spatial distribution of selected site-specific ground motion parameters at engineering bedrock through region-specific ground motion prediction equations (GMPEs) or physical simulation of ground motion. By using the Earthquake Loss Estimation Routine (ELER) software, the multi-level methodology developed for real time estimation of losses is capable of incorporating regional variability and sources of uncertainty stemming from GMPEs, fault finiteness, site modifications, inventory of physical and social elements subjected to earthquake hazard and the associated vulnerability relationships.

Development of a reverse transcription loop-mediated isothermal amplification assay for the detection of vesicular stomatitis New Jersey virus: use of rapid molecular assay to differentiate between vesicular disease viruses

USDA-ARS?s Scientific Manuscript database

Vesicular stomatitis (VS) is endemic in Central America and northern regions of South America. Sporadic outbreaks of VS can occur in cattle and pigs where the clinical presentation can be similar to foot-and-mouth disease (FMD). There is therefore a pressing need for rapid, sensitive and specific d...

Analysis of rapid increase in the plasma density during the ramp-up phase in a radio frequency negative ion source by large-scale particle simulation

NASA Astrophysics Data System (ADS)

Yasumoto, M.; Ohta, M.; Kawamura, Y.; Hatayama, A.

2014-02-01

Numerical simulations become useful for the developing RF-ICP (Radio Frequency Inductively Coupled Plasma) negative ion sources. We are developing and parallelizing a two-dimensional three velocity electromagnetic Particle-In-Cell code. The result shows rapid increase in the electron density during the density ramp-up phase. A radial electric field due to the space charge is produced with increase in the electron density and the electron transport in the radial direction is suppressed. As a result, electrons stay for a long period in the region where the inductive electric field is strong, and this leads efficient electron acceleration and a rapid increasing of the electron density.

Assessment of freshwater withdrawals and availability for Marcellus shale natural gas development: a case study in Pennsylvania

Treesearch

Patrick C. Eisenhauer; Nicolas P. Zegre; Samuel J. Lamont

2013-01-01

To evaluate surface water withdrawals used for Marcellus shale natural gas development and to assess potential impacts on water yield, a regional water balance model was developed for the Pine Creek watershed, located primarily in Lycoming County, Pennsylvania. Marcellus shale development has increased rapidly in Lycoming County since 2007. We used precipitation,...

Regional W-Phase Source Inversion for Moderate to Large Earthquakes in China and Neighboring Areas

NASA Astrophysics Data System (ADS)

Zhao, Xu; Duputel, Zacharie; Yao, Zhenxing

2017-12-01

Earthquake source characterization has been significantly speeded up in the last decade with the development of rapid inversion techniques in seismology. Among these techniques, the W-phase source inversion method quickly provides point source parameters of large earthquakes using very long period seismic waves recorded at teleseismic distances. Although the W-phase method was initially developed to work at global scale (within 20 to 30 min after the origin time), faster results can be obtained when seismological data are available at regional distances (i.e., Δ ≤ 12°). In this study, we assess the use and reliability of regional W-phase source estimates in China and neighboring areas. Our implementation uses broadband records from the Chinese network supplemented by global seismological stations installed in the region. Using this data set and minor modifications to the W-phase algorithm, we show that reliable solutions can be retrieved automatically within 4 to 7 min after the earthquake origin time. Moreover, the method yields stable results down to Mw = 5.0 events, which is well below the size of earthquakes that are rapidly characterized using W-phase inversions at teleseismic distances.

Exploration of the metal coordination region of concanavalin A for its interaction with human norovirus.

PubMed

Kim, Duwoon; Lee, Hee-Min; Oh, Kyung-Seo; Ki, Ah Young; Protzman, Rachael A; Kim, Dongkyun; Choi, Jong-Soon; Kim, Min Ji; Kim, Sung Hyun; Vaidya, Bipin; Lee, Seung Jae; Kwon, Joseph

2017-06-01

Rapid methods for the detection and clinical treatment of human norovirus (HuNoV) are needed to control foodborne disease outbreaks, but reliable techniques that are fast and sensitive enough to detect small amounts of HuNoV in food and aquatic environments are not yet available. We explore the interactions between HuNoV and concanavalin A (Con A), which could facilitate the development of a sensitive detection tool for HuNoV. Biophysical studies including hydrogen/deuterium exchange (HDX) mass spectrometry and surface plasmon resonance (SPR) revealed that when the metal coordinated region of Con A, which spans Asp16 to His24, is converted to nine alanine residues (mCon A MCR ), the affinity for HuNoV (GII.4) diminishes, demonstrating that this Ca 2+ and Mn 2+ coordinated region is responsible for the observed virus-protein interaction. The mutated carbohydrate binding region of Con A (mCon A CBR ) does not affect binding affinity significantly, indicating that MCR of Con A is a major region of interaction to HuNoV (GII.4). The results further contribute to the development of a HuNoV concentration tool, Con A-immobilized polyacrylate beads (Con A-PAB), for rapid detection of genotypes from genogroups I and II (GI and GII). This method offers many advantages over currently available methods, including a short concentration time. HuNov (GI and GII) can be detected in just 15 min with 90% recovery through Con A-PAB application. In addition, this method can be used over a wide range of pH values (pH 3.0 - 10.0). Overall, this rapid and sensitive detection of HuNoV (GI and GII) will aid in the prevention of virus transmission pathways, and the method developed here may have applicability for other foodborne viral infections. Copyright © 2017 Elsevier Ltd. All rights reserved.

Evaluation of a moderate resolution, satellite-based impervious surface map using an independent, high-resolution validation data set

USGS Publications Warehouse

Jones, J.W.; Jarnagin, T.

2009-01-01

Given the relatively high cost of mapping impervious surfaces at regional scales, substantial effort is being expended in the development of moderate-resolution, satellite-based methods for estimating impervious surface area (ISA). To rigorously assess the accuracy of these data products high quality, independently derived validation data are needed. High-resolution data were collected across a gradient of development within the Mid-Atlantic region to assess the accuracy of National Land Cover Data (NLCD) Landsat-based ISA estimates. Absolute error (satellite predicted area - "reference area") and relative error [satellite (predicted area - "reference area")/ "reference area"] were calculated for each of 240 sample regions that are each more than 15 Landsat pixels on a side. The ability to compile and examine ancillary data in a geographic information system environment provided for evaluation of both validation and NLCD data and afforded efficient exploration of observed errors. In a minority of cases, errors could be explained by temporal discontinuities between the date of satellite image capture and validation source data in rapidly changing places. In others, errors were created by vegetation cover over impervious surfaces and by other factors that bias the satellite processing algorithms. On average in the Mid-Atlantic region, the NLCD product underestimates ISA by approximately 5%. While the error range varies between 2 and 8%, this underestimation occurs regardless of development intensity. Through such analyses the errors, strengths, and weaknesses of particular satellite products can be explored to suggest appropriate uses for regional, satellite-based data in rapidly developing areas of environmental significance. ?? 2009 ASCE.

[Landscape pattern gradient dynamics and desakota features in rapid urbanization area: a case study in Panyu of Guangzhou].

PubMed

Yu, Long-Sheng; Fu, Yi-Fu; Yu, Huai-Yi; Li, Zhi-Qin

2011-01-01

In order to understand the landscape pattern gradient dynamics and desakota features in rapid urbanization area, this paper took the rapidly urbanizing Panyu District of Guangzhou City as a case, and analyzed its land use and land cover data, based on four Landsat TM images from 1990 to 2008. With the combination of gradient analysis and landscape pattern analysis, and by using the landscape indices in both class and landscape scales, the spatial dynamics and desakota feature of this rapidly urbanizing district were quantified. In the study district, there was a significant change in the landscape pattern, and a typical desakota feature presented along buffer gradient zones. Urban landscape increased and expanded annually, accompanied with serious fragmentation of agricultural landscape. The indices patch density, contagion, and landscape diversity, etc., changed regularly in the urbanization gradient, and the peak of landscape indices appeared in the gradient zone of 4-6 km away from the urban center. The landscape patterns at time series also reflected the differences among the dynamics in different gradient zones. The landscape pattern in desakota region was characterized by complex patch shape, high landscape diversity and fragmentation, and remarkable landscape dynamics. The peaks of landscape indices spread from the urban center to border areas, and desakota region was expanding gradually. The general trend of spatiotemporal dynamics in desakota region and its driving forces were discussed, which could be benefit to the regional land use policy-making and sustainable development planning.

Creation of an in vitro biomechanical model of the trachea using rapid prototyping.

PubMed

Walenga, Ross L; Longest, P Worth; Sundaresan, Gobalakrishnan

2014-06-03

Previous in vitro models of the airways are either rigid or, if flexible, have not matched in vivo compliance characteristics. Rapid prototyping provides a quickly evolving approach that can be used to directly produce in vitro airway models using either rigid or flexible polymers. The objective of this study was to use rapid prototyping to directly produce a flexible hollow model that matches the biomechanical compliance of the trachea. The airway model consisted of a previously developed characteristic mouth-throat region, the trachea, and a portion of the main bronchi. Compliance of the tracheal region was known from a previous in vivo imaging study that reported cross-sectional areas over a range of internal pressures. The compliance of the tracheal region was matched to the in vivo data for a specific flexible resin by iteratively selecting the thicknesses and other dimensions of tracheal wall components. Seven iterative models were produced and illustrated highly non-linear expansion consisting of initial rapid size increase, a transition region, and continued slower size increase as pressure was increased. Thickness of the esophageal interface membrane and initial trachea indention were identified as key parameters with the final model correctly predicting all phases of expansion within a value of 5% of the in vivo data. Applications of the current biomechanical model are related to endotracheal intubation and include determination of effective mucus suctioning and evaluation of cuff sealing with respect to gases and secretions. Copyright © 2014 Elsevier Ltd. All rights reserved.

Supplementary Education as a Resource for Economic Modernization

ERIC Educational Resources Information Center

Gorshkov, M. K.; Kliucharev, G. A.

2013-01-01

Supplementary professional education in Russia has grown rapidly, offering training not provided by the state. Further development will require more coordination with both private and state educational institutions, as well as with national and regional educational policies.

An Assessment of Regional Water Resources and Agricultural Sustainability in the Mississippi River Alluvial Aquifer System of Mississippi and Arkansas Under Current and Future Climate

NASA Astrophysics Data System (ADS)

Rigby, J.; Reba, M.

2011-12-01

The Lower Mississippi River Alluvial Plain is a highly productive agricultural region for rice, soy beans, and cotton that depends heavily on irrigation. Development of the Mississippi River Alluvial Aquifer (MRAA), one of the more prolific agricultural aquifers in the country, has traditionally been the primary source for irrigation in the region yielding over 1,100 Mgal/day to irrigation wells. Increasingly, the realities of changing climate and rapidly declining water tables have highlighted the necessity for new water management practices. Tail-water recovery and reuse is a rapidly expanding practice due in part to the efforts and cost-sharing of the NRCS, but regional studies of the potential for such practices to alleviate groundwater mining under current and future climate are lacking. While regional studies of aquifer geology have long been available, including assessments of regional groundwater flow, much about the aquifer is still not well understood including controls on recharge rates, a crucial component of water management design. We review the trends in regional availability of surface and groundwater resources, their current status, and the effects of recent changes in management practices on groundwater decline in Mississippi and Arkansas. Global and regional climate projections are used to assess scenarios of sustainable aquifer use under current land use and management along with the potential for more widely practiced surface water capture and reuse to alleviate groundwater decline. Finally, we highlight crucial knowledge gaps and challenges associated with the development of water management practices for sustainable agricultural use in the region.

Tropical Cyclone Paka's Initial Explosive Development (10-12 December, 1997)

NASA Technical Reports Server (NTRS)

Rodgers, Edward B.; Halverson, Jeff; Simpson, Joanne; Olson, William; Pierce, Harold

1999-01-01

Convection associated with an equatorial westerly wind burst was first observed late November during the strong El Nino of 1997 at approximately 2000 km southwest of the Hawaiian Islands. This region of convection lead to the formation of twin tropical cyclones, one in the southern hemisphere named Pam and the other in the northern hemisphere named Paka. During the first week in December, tropical cyclone Paka, the system of concern, reached tropical storm stage as it moved rapidly westward at relatively low latitudes. During the 10-12 of December, Paka rapidly developed into a typhoon.

Blueprint for the development of low carbon society scenarios for Asian regions- case study of Iskandar Malaysia

NASA Astrophysics Data System (ADS)

Ho, C. S.; Matsuoka, Y.; Chau, L. W.; Teh, B. T.; Simson, J. J.; Gomi, K.

2013-06-01

Malaysian government aims to reduce 40% reduction of carbon emission intensity by the year 2020 using 2005 as the base year. Several mitigation and adaptation strategies in addressing environmental and climate change are formulated at national, regional and local level to mitigate greenhouse gases. This paper aims to examine local and regional resilient policy actions to reduce greenhouse gases using the empirical case of Iskandar Malaysia. The study case is selected because it is one of the fast developing economic corridor regions in Malaysia. In this study, a low carbon society blueprint is initiated to guide the rapid development of this economic corridor towards low carbon green growth. The blueprint provides the sustainable green growth roadmap with major 12 actions for the region. It is done through a bottom-up approach where stakeholder discussions are carried out to allow local communities participation in the plan formulation.

[On some characteristics of the population development in the Shenzhen Special Economic Region].

PubMed

Zhang, Z; Yang, Q; An, H; Fang, D

1984-03-29

Shenzhen was originally a town in Guandong Province. In 1979, it was made into a Special Economic Region in order to cope with the needs of modernization. Because of rapid economic development, the population has also been growing rapidly. Before 1979, the total population of Shenzhen was only 20,000, both industry and agriculture were backward, and the living standard was low. After it was made a Special Economic Region, its population figure reached 200,000 according to a 1982 report. The age structure of the local population is young, and there are more males than females. In the last two years, because of family planning measures, the natural population growth rate has shown an obvious downward trend. The population development of Shenzhen has several characteristics: 1) the pace of population growth is very fast; 2) the educational level for the population is high, and investment in education is emphasized; 3) population mobility is strong, and it has an extensive impact on the local market, transportation, and social order; 4) the social and economic systems of Hong Kong have a special influence on its population development. Special studies and discussions concerning how to control Shenzhen's population growth, how to determine the trends toward change in age structure, and how to promote population quality and spiritual civilization should be conducted according to characteristics of the local population development.

Central Asian Republics: A Case Study for Medical Education Reform

ERIC Educational Resources Information Center

Conaboy, Kathleen A.; Nugmanova, Zhamilya; Yeguebaeva, Saltanat; Jaeger, Frances; Daugherty, Robert M.

2005-01-01

Social, political, and economic changes in the former Soviet Union precipitated both the collapse of a once-centralized medical education system in the region and the development of individual models in its place. In the context of rapid globalization and international concerns about health, this development of "nation-based" models for…

A Role-Playing Virtual World for Web-Based Application Courses

ERIC Educational Resources Information Center

Depradine, Colin

2007-01-01

With the rapid development of the information communication and technology (ICT) infrastructure in the Caribbean, there is an increasing demand for skilled software developers to meet the ICT needs of the region. Consequently, the web-based applications course offered at the University of the West Indies, has been redeveloped. One major part of…

Summary appraisals of the Nation's ground-water resources; Ohio region

USGS Publications Warehouse

Bloyd, Richard M.

1974-01-01

Rapid advance of techniques in ground-water hydrology during recent years has provided methods which the hydrologist can use for evaluating planned ground-water development. Therefore, the manager can resolve the inherent problems that historically have bred caution when this part of our total water resource was considered for development.

Food Security Hotspots in India under Changing Climate and Growing Populatio

NASA Astrophysics Data System (ADS)

Singh, N.; Cherkauer, K. A.; Ashfaq, M.; Rastogi, D.

2015-12-01

Global climate change, unprecedented population growth, and rapid urbanization have elevated the possibility of food and water shortages in many regions across the world. The likelihood of such shortages in the future is further exacerbated by the fact that increased greenhouse forcing and rapid growth in human population will continue for at least the next several decades. These socio-environmental changes will likely put some regions under enormous economic and environmental stress by forcing them to adapt to new conditions. India with its rapidly growing population and high rates of urbanization and industrialization is one such region whose agricultural resources will be particularly vulnerable to the impact of these changes. This study collectively reviews and analyses the possible impacts of climate change, population growth and resulting land use change on the availability of food and water in the coming decades for India. By analyzing and fusing a wide variety of existing data and research on the impact of land use change, population, and climate change, on water and food resources this study develops an understanding of the broader implications of each of the changes on food security in the region. In addition, the study focuses on the need to assess and quantify the combination of such impacts at a regional level and identify food security hotspots spatially across India that will help to narrow down regions in the country which will be severely affected and need priority adaptation and mitigation measures.

Impact of socioeconomic development on ecosystem services and its conservation strategies: a case study of Shandong Province, China.

PubMed

Wang, Shujun; Liu, Jian; Wang, Renqing; Ni, Zirong; Xu, Shipeng; Sun, Yueyao

2012-05-01

Ecosystems and their components provide a lot of benefits for the welfare of human beings. Coupled with increasing socioeconomic development, most of the rapidly developing and transitional countries and regions have been experiencing dramatic land use changes. This has resulted in a large amount of forestland, grassland, and wetland being occupied as residential and industrial land or reclaimed for arable land, which in turn results in a sharp deterioration of ecosystem services around the world. Shandong Province, an economically powerful province of China, was chosen as a case study in order to capture the impact of socioeconomic development on ecosystem services. By way of the study, land uses and their changes were categorized between 1980 and 2006, and the ecosystem services capital and changes of 111 counties of Shandong Province in different phases were evaluated, as well as the total ecosystem services capital, followed by the zoning of ecosystem services function region of Shandong Province. We found that the counties in mountainous areas and wetlands, where generally the prefectural-level cities are located with a rapid socioeconomic development, experienced a successive deterioration of ecosystem services especially during the 2000s. Finally, three conservation strategies for managing and improving ecosystem services were proposed and discussed with the aim of achieving coordinate and sustainable development of the socioeconomy, environment, and ecosystems not only in Shandong Province but also in other provinces of China, as well as in other developing and transitional countries and regions.

Joint Distributed Regional Training Capacity: A Scoping Study

DTIC Science & Technology

2007-12-01

use management mechanisms 4. Develop assessment tools to rapidly quantify temporary land-use dis- turbance risks . The development of such...the Army Environmental Requirements and Technology Assessments (AERTA) process to develop validated requirements upon which to base more focused...conducting a large environmental assessment study each time an exercise is planned is needlessly expensive and does not give the flexibility to

Trends and Developments of Higher Education Research in Hong Kong: In Pursuit of a Cosmopolitan Vision

ERIC Educational Resources Information Center

Lo, William Yat Wai; Ng, Felix Sai Kit

2015-01-01

With the processes of inter- and intranationalization, higher education in Hong Kong has been rapidly expanding in an effort to develop the city into a regional education hub. This article explores the trends and developments of higher education research (HER) in Hong Kong in the context of inter- and intranationalization. By drawing on the data…

Progress on the development of seismic resilient Tall CLT Buildings in the Pacific Northwest

Treesearch

Shiling Pei; Jeffrey Berman; Daniel Dolan; John van de Lindt; James Ricles; Richard Sause; Hans-Erik Blomgren; Marjan Popovski; Douglas Rammer

2014-01-01

As urban densification occurs in U.S. regions of high seismicity, there is a natural demand for seismically resilient tall buildings that are reliable, economically viable, and can be rapidly constructed. In urban regions on the west coast of the U.S., specifically the Pacific Northwest, there is significant interest in utilizing CLT in 8-20 story residential and...

Climate modeling with decision makers in mind

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jones, Andrew; Calvin, Katherine; Lamarque, Jean -Francois

The need for regional- and local-scale climate information is increasing rapidly as decision makers seek to anticipate and manage a variety of context-specific climate risks over the next several decades. Furthermore, global climate models are not developed with these user needs in mind, and they typically operate at resolutions that are too coarse to provide information that could be used to support regional and local decisions.

Climate modeling with decision makers in mind

DOE PAGES

Jones, Andrew; Calvin, Katherine; Lamarque, Jean -Francois

2016-04-27

The need for regional- and local-scale climate information is increasing rapidly as decision makers seek to anticipate and manage a variety of context-specific climate risks over the next several decades. Furthermore, global climate models are not developed with these user needs in mind, and they typically operate at resolutions that are too coarse to provide information that could be used to support regional and local decisions.

Development of a Sequence-Characterized Amplified Region Marker-Targeted Quantitative PCR Assay for Strain-Specific Detection of Oenococcus oeni during Wine Malolactic Fermentation▿

PubMed Central

Solieri, Lisa; Giudici, Paolo

2010-01-01

Control over malolactic fermentation (MLF) is a difficult goal in winemaking and needs rapid methods to monitor Oenococcus oeni malolactic starters (MLS) in a stressful environment such as wine. In this study, we describe a novel quantitative PCR (QPCR) assay enabling the detection of an O. oeni strain during MLF without culturing. O. oeni strain LB221 was used as a model to develop a strain-specific sequence-characterized amplified region (SCAR) marker derived from a discriminatory OPA20-based randomly amplified polymorphic DNA (RAPD) band. The 5′ and 3′ flanking regions and the copy number of the SCAR marker were characterized using inverse PCR and Southern blotting, respectively. Primer pairs targeting the SCAR sequence enabled strain-specific detection without cross amplification of other O. oeni strains or wine species of lactic acid bacteria (LAB), acetic acid bacteria (AAB), and yeasts. The SCAR-QPCR assay was linear over a range of cell concentrations (7 log units) and detected as few as 2.2 × 102 CFU per ml of red wine with good quantification effectiveness, as shown by the correlation of QPCR and plate counting results. Therefore, the cultivation-independent monitoring of a single O. oeni strain in wine based on a SCAR marker represents a rapid and effective strain-specific approach. This strategy can be adopted to develop easy and rapid detection techniques for monitoring the implantation of inoculated O. oeni MLS on the indigenous LAB population, reducing the risk of unsuccessful MLF. PMID:20935116

User perspectives on the usability of a regional health information exchange

PubMed Central

Ho, Yun-Xian; Cala, Cather Marie; Blakemore, Dana; Chen, Qingxia; Frisse, Mark E; Johnson, Kevin B

2011-01-01

Objective We assessed the usability of a health information exchange (HIE) in a densely populated metropolitan region. This grant-funded HIE had been deployed rapidly to address the imminent needs of the patient population and the need to draw wider participation from regional entities. Design We conducted a cross-sectional survey of individuals given access to the HIE at participating organizations and examined some of the usability and usage factors related to the technology acceptance model. Measurements We probed user perceptions using the Questionnaire for User Interaction Satisfaction, an author-generated Trust scale, and user characteristic questions (eg, age, weekly system usage time). Results Overall, users viewed the system favorably (ratings for all usability items were greater than neutral (one-sample Wilcoxon test, p<0.0014, Bonferroni-corrected for 35 tests). System usage was regressed on usability, trust, and demographic and user characteristic factors. Three usability factors were positively predictive of system usage: overall reactions (p<0 0.01), learning (p<0.05), and system functionality (p<0.01). Although trust is an important component in collaborative relationships, we did not find that user trust of other participating healthcare entities was significantly predictive of usage. An analysis of respondents' comments revealed ways to improve the HIE. Conclusion We used a rapid deployment model to develop an HIE and found that perceptions of system usability were positive. We also found that system usage was predicted well by some aspects of usability. Results from this study suggest that a rapid development approach may serve as a viable model for developing usable HIEs serving communities with limited resources. PMID:21622933

The Water-Energy-Food Nexus in a Rapidly Developing Resource Sector

NASA Astrophysics Data System (ADS)

Allen, D. M.; Kirste, D. M.

2014-12-01

Technological advances and access to global markets have changed the rate at which resource exploitation takes place. The environmental impact of the rapid development and distribution of resources such as minerals and hydrocarbons has led to a greater potential for significant stress on water resources both in terms of quality and quantity. How and where those impacts manifest is crucial to determining appropriate risk management strategies. North East British Columbia has an abundance of shale gas reserves that are anticipated to be exploited at a large scale in coming years, primarily for export as liquefied natural gas (LNG). However, there is growing concern that fracking and other activities related to shale gas development pose risks to water quality and quantity in the region. Water lies at the center of the water-energy-food nexus, with an accelerating water demand for fracking and industrial operations as well as for domestic, environmental and agricultural uses. Climate change is also anticipated to alter the hydrologic regime, posing added stress to the water resource. This case study examines the water-energy-food nexus in the context of a region that is impacted by a rapidly developing resource sector, encompassing water demand/supply, climate change, interaction between deep aquifers and shallow aquifers/surface waters, water quality concerns related to fracking, land use disturbance, and community impacts. Due to the rapid rate of development, there are significant knowledge gaps in our understanding of the water resource. Currently agencies are undertaking water resource assessments and establishing monitoring sites. This research aims to assess water security in North East British Columbia in a coordinated fashion through various partnerships. In addition to collecting baseline knowledge and data, the study will evaluate risk and resilience indicators in relation to water security. A risk assessment framework specific to the shale gas development context will be developed to evaluate the various components of risk spatially and temporally. Resilience is currently being assessed through a comprehensive examination of the current regulatory and policy regime.

NASA'S SERVIR Gulf of Mexico Project: The Gulf of Mexico Regional Collaborative (GoMRC)

NASA Technical Reports Server (NTRS)

Quattrochi, Dale A.; Irwin, Daniel; Presson, Joan; Estes, Maury; Estes, Sue; Judd, Kathleen

2006-01-01

The Gulf of Mexico Regional Collaborative (GoMRC) is a NASA-funded project that has as its goal to develop an integrated, working, prototype IT infrastructure for Earth science data, knowledge and models for the five Gulf U.S. states and Mexico, and to demonstrate its ability to help decision-makers better understand critical Gulf-scale issues. Within this preview, the mission of this project is to provide cross cutting solution network and rapid prototyping capability for the Gulf of Mexico region, in order to demonstrate substantial, collaborative, multi-agency research and transitional capabilities using unique NASA data sets and models to address regional problems. SERVIR Mesoamerica is seen as an excellent existing framework that can be used to integrate observational and GIs data bases, provide a sensor web interface, visualization and interactive analysis tools, archival functions, data dissemination and product generation within a Rapid Prototyping concept to assist decision-makers in better understanding Gulf-scale environmental issues.

Ecosystem services provided by pacific NW Estuaries: State of knowledge

EPA Science Inventory

Coastal regions in the United States are rapidly developing areas, with increasing urbanization and growing populations. Estuarine and nearshore coastal marine waters provide valuable ecosystem services to resident and transient human communities. In the Pacific Northwest (PNW)...

Causes of rapid uplift and exceptional topography of Gongga Shan on the eastern margin of the Tibetan Plateau

NASA Astrophysics Data System (ADS)

Cook, Kristen L.; Hovius, Niels; Wittmann, Hella; Heimsath, Arjun M.; Lee, Yuan-Hsi

2018-01-01

Erosion and tectonic uplift are widely thought to be coupled through feedbacks involving orographic precipitation, relief development, and crustal weakening. In many orogenic systems, it can be difficult to distinguish whether true feedbacks exist, or whether observed features are a consequence of tectonic forcing. To help elucidate these interactions, we examine Gongga Shan, a 7556 m peak on the eastern margin of the Tibetan Plateau where cosmogenic 10Be basin-wide erosion rates reach >5 mm/yr, defining a region of localized rapid erosion associated with a restraining bend in the left-lateral Xianshuihe Fault. Erosion rates are consistent with topography, thermochronometry, and geodetic data, suggesting a stable pattern of uplift and exhumation over at least the past 2-3 My. Transpression along the Xianshuihe Fault, orographically enhanced precipitation, thermally weakened crust, and substantial local relief all developed independently in the Gongga region and existed there prior to the uplift of Gongga Shan. However, only where all of these conditions are present do the observed topographic and erosional extremes exist, and their relative timing indicates that these conditions are not a consequence of rapid uplift. We conclude that their collocation at 3-4 Ma set into motion a series of feedbacks between erosion and uplift that has resulted in the exceptionally high topography and rapid erosion rates observed today.

Rapid growth in nitrogen dioxide pollution over Western China, 2005-2013

NASA Astrophysics Data System (ADS)

Cui, Y.-Z.; Lin, J.-T.; Song, C.; Liu, M.-Y.; Yan, Y.-Y.; Xu, Y.; Huang, B.

2015-12-01

Western China has experienced rapid industrialization and urbanization since the implementation of the National Western Development Strategies (the "Go West" movement) in 1999. This transition has affected the spatial and temporal characteristics of nitrogen dioxide (NO2) pollution. In this study, we analyze the trends and variability of tropospheric NO2 vertical column densities (VCDs) from 2005 to 2013 over Western China, based on a wavelet analysis on monthly mean NO2 data derived from the Ozone Monitoring Instrument (OMI) measurements. We focus on the anthropogenic NO2 by subtracting region-specific "background" values dominated by natural sources. We find significant NO2 growth over Western China between 2005 and 2013 (8.6 ± 0.9 % yr-1 on average, relative to 2005), with the largest increments (15 % yr-1 or more) over parts of several city clusters. The NO2 pollution in most provincial regions rose rapidly from 2005 to 2011 but stabilized or declined afterwards. The NO2 trends were driven mainly by changes in anthropogenic emissions, as confirmed by a nested GEOS-Chem model simulation and a comparison with Chinese official emission statistics. The rate of NO2 growth during 2005-2013 reaches 11.3 ± 1.0 % yr-1 over Northwestern China, exceeding the rates over Southwestern China (5.9 ± 0.6 % yr-1) and the three well-known polluted regions in the east (5.3 ± 0.8 % yr-1 over Beijing-Tianjin-Hebei, 4.0 ± 0.6 % yr-1} over the Yangtze River Delta, and -3.3 ± 0.3 % yr-1 over the Pearl River Delta). Additional socioeconomic analyses suggest that the rapid NO2 growth in Northwestern China is likely related to the fast developing resource- and pollution-intensive industries along with the "Go West" movement as well as relatively weak emission controls. Further efforts should be made to alleviate NOx pollution to achieve sustainable development in Western China.

Rapid growth in nitrogen dioxide pollution over Western China, 2005-2013

NASA Astrophysics Data System (ADS)

Cui, Yuanzheng; Lin, Jintai; Song, Chunqiao; Liu, Mengyao; Yan, Yingying; Xu, Yuan; Huang, Bo

2016-05-01

Western China has experienced rapid industrialization and urbanization since the implementation of the National Western Development Strategies (the "Go West" movement) in 1999. This transition has affected the spatial and temporal characteristics of nitrogen dioxide (NO2) pollution. In this study, we analyze the trends and variability of tropospheric NO2 vertical column densities (VCDs) from 2005 to 2013 over Western China, based on a wavelet analysis on monthly mean NO2 data derived from the Ozone Monitoring Instrument (OMI) measurements. We focus on the anthropogenic NO2 by subtracting region-specific "background" values dominated by natural sources. After removing the background influences, we find significant anthropogenic NO2 growth over Western China between 2005 and 2013 (8.6 ± 0.9 % yr-1 on average, relative to 2005), with the largest increments (15 % yr-1 or more) over parts of several city clusters. The NO2 pollution in most provincial-level regions rose rapidly from 2005 to 2011 but stabilized or declined afterwards. The NO2 trends were driven mainly by changes in anthropogenic emissions, as confirmed by a nested GEOS-Chem model simulation and a comparison with Chinese official emission statistics. The rate of NO2 growth during 2005-2013 reaches 11.3 ± 1.0 % yr-1 over Northwestern China, exceeding the rates over Southwestern China (5.9 ± 0.6 % yr-1) and the three well-known polluted regions in the east (5.3 ± 0.8 % yr-1 over Beijing-Tianjin-Hebei, 4.0 ± 0.6 % yr-1 over the Yangtze River Delta, and -3.3 ± 0.3 % yr-1 over the Pearl River Delta). Subsequent socioeconomic analyses suggest that the rapid NO2 growth over Northwestern China is likely related to the fast developing resource- and pollution-intensive industries along with the "Go West" movement as well as relatively weak emission controls. Further efforts should be made to alleviate NOx pollution to achieve sustainable development in Western China.

Identification of pollutant sources in a rapidly developing urban river catchment in China

NASA Astrophysics Data System (ADS)

Huang, Jingshui; Yin, Hailong; Jomma, Seifeddine; Rode, Michael; Zhou, Qi

2016-04-01

Rapid economic development and urbanization worldwide cause serious ecological and environmental problems. A typical region that is in transition and requires systemic research for effective intervention is the rapidly developing city of Hefei in central P. R. China. In order to investigate the sources of pollutants over a one-year period in Nanfei River catchment that drains the city of Hefei, discharges were measured and water samples were taken and measured along the 14km river section at 10 sites for 4 times from 2013 to 2014. Overflow concentrations of combined sewer and separate storm drains were also measured by selecting 15 rain events in 4 typical drainage systems. Loads and budgets of water and different pollutant sources i.e., wastewater treatment plant (WWTP) effluent, urban drainage overflow, unknown wastewater were calculated. The water balance demonstrated that >70% of the discharge originated from WWTP effluent. Lack of clean upstream inflow thereby is threatening ecological safety and water quality. Furthermore, mass fluxes calculations revealed that >40% of the COD (Chemical Oxygen Demand) loads were from urban drainage overflow because of a large amount of discharge of untreated wastewater in pumping stations during rain events. WWTP effluent was the predominant source of the total nitrogen loads (>60%) and ammonia loads (>45%). However, the total phosphorous loads from three different sources are similar (˜1/3). Thus, our research provided a basis for appropriate and prior mitigation strategies (state-of-art of WWTP upgrade, sewer systems modification, storm water regulation and storage capacity improvement, etc.) for different precedence-controlled pollutants with the limited infrastructure investments in these rapidly developing urban regions.

Growth, development, and nutritional physiology of grasshoppers from subarctic and temperate regions.

PubMed

Fielding, Dennis J; Defoliart, Linda S

2007-01-01

Despite the importance of developmental rate, growth rate, and size at maturity in the life history of poikliotherms, the trade-offs among these traits and selection pressures involved in the evolution of these traits are not well understood. This study compared these traits in a grasshopper, Melanoplus sanguinipes F. (Orthoptera: Acrididae), from two contrasting geographical regions, subarctic Alaska and temperate Idaho. The growing season in the interior of Alaska is about 80 d shorter than at low-elevation sites in Idaho. We hypothesized that the Alaskan grasshoppers would show more rapid growth and development than grasshoppers from Idaho, at the cost of greater sensitivity to food quality. On a diet of lettuce and wheat bran, grasshoppers from Alaska developed from egg hatch to adult more rapidly than those from Idaho at each of three different temperature regimes. Averaged over all temperature treatments, the weight of the Alaskan grasshoppers was about 5% less than that of the Idaho grasshoppers at the adult molt. Feeding and digestive efficiencies were determined for the final two instars using two meridic diets: one with a high concentration of nutrients and the other with the same formulation but diluted with cellulose. Alaskan grasshoppers again developed more rapidly, weighed less, and had faster growth rates than those from Idaho. Alaskan grasshoppers supported their more rapid growth by increasing postingestive efficiencies; that is, they had higher conversion rates of digested matter to biomass on the high-quality diet, greater assimilation of food on the low-quality diet, and greater efficiency of nitrogen assimilation or retention on both diets. There was no evidence that performance of Alaskan grasshoppers suffered any more than that of the Idaho grasshoppers on the low-quality diet.

Rapid acquisition but slow extinction of an attentional bias in space.

PubMed

Jiang, Yuhong V; Swallow, Khena M; Rosenbaum, Gail M; Herzig, Chelsey

2013-02-01

Substantial research has focused on the allocation of spatial attention based on goals or perceptual salience. In everyday life, however, people also direct attention using their previous experience. Here we investigate the pace at which people incidentally learn to prioritize specific locations. Participants searched for a T among Ls in a visual search task. Unbeknownst to them, the target was more often located in one region of the screen than in other regions. An attentional bias toward the rich region developed over dozens of trials. However, the bias did not rapidly readjust to new contexts. It persisted for at least a week and for hundreds of trials after the target's position became evenly distributed. The persistence of the bias did not reflect a long window over which visual statistics were calculated. Long-term persistence differentiates incidentally learned attentional biases from the more flexible goal-driven attention. PsycINFO Database Record (c) 2013 APA, all rights reserved.

Global change and rampant land and water resource development a case study in western Canada

NASA Astrophysics Data System (ADS)

Byrne, J.; Kienzle, S.; Schindler, D.

2006-12-01

This paper reviews the impacts of global and regional change on the land and water resources in Alberta, Canada. Alberta contains most of Canada's fossil fuel energy resources, including: extensive conventional crude oil and natural gas fields; widespread coal deposits over the southern half of the province with potential for mining and coal bed methane extraction (CBM); and the Athabasca oil sands a crude oil supply of at least several hundred billion barrels entangled in extensive sand deposits lying along the Athabasca River. The province is also a focal point for intensive agriculture in the form of irrigation that has led to over allocated rivers in the south, and a booming economy associated with rapid population growth and associated urban sprawl in support of rapid resource development. All this development is occurring in a region where global climate change is expected to have substantial impacts on land and water in the next few decades. This work outlines the potential impacts of a range of human activities associated with some of the most intensive and extensive resource development plans in North America focused on one region - Alberta. Oil sands investments alone in the next few decades are forecast to exceed one hundred billion dollars! There are plans to double and triple primary and secondary agricultural production; expand coal mining in support of conventional coal fired power plants; and establish CBM well networks over much of the southern half of the province, including extensive development of CBM on the eastern slopes of the Rocky Mountains, the principal source of water for most of the semi-arid Canadian plains. The development pace and direction will likely result in widespread environmental contamination of regional and global consequence.

Regional intensity attenuation models for France and the estimation of magnitude and location of historical earthquakes

USGS Publications Warehouse

Bakun, W.H.; Scotti, O.

2006-01-01

Intensity assignments for 33 calibration earthquakes were used to develop intensity attenuation models for the Alps, Armorican, Provence, Pyrenees and Rhine regions of France. Intensity decreases with ?? most rapidly in the French Alps, Provence and Pyrenees regions, and least rapidly in the Armorican and Rhine regions. The comparable Armorican and Rhine region attenuation models are aggregated into a French stable continental region model and the comparable Provence and Pyrenees region models are aggregated into a Southern France model. We analyse MSK intensity assignments using the technique of Bakun & Wentworth, which provides an objective method for estimating epicentral location and intensity magnitude MI. MI for the 1356 October 18 earthquake in the French stable continental region is 6.6 for a location near Basle, Switzerland, and moment magnitude M is 5.9-7.2 at the 95 per cent (??2??) confidence level. MI for the 1909 June 11 Trevaresse (Lambesc) earthquake near Marseilles in the Southern France region is 5.5, and M is 4.9-6.0 at the 95 per cent confidence level. Bootstrap resampling techniques are used to calculate objective, reproducible 67 per cent and 95 per cent confidence regions for the locations of historical earthquakes. These confidence regions for location provide an attractive alternative to the macroseismic epicentre and qualitative location uncertainties used heretofore. ?? 2006 The Authors Journal compilation ?? 2006 RAS.

Assessing Stream Channel Stability at Bridges in Physiographic Regions

DOT National Transportation Integrated Search

2006-07-01

The objective of this study was to expand and improve a rapid channel stability assessment method developed previously by Johnson et al. to include additional factors, such as major physiographic units across the United States, a greater range of ban...

Promoting the health of Europeans in a rapidly changing world: a historical study of the implementation of World Health Organisation policies by the Nursing and Midwifery Unit, European Regional Office, 1970-2003.

PubMed

Hallett, Christine; Wagner, Lis

2011-12-01

Promoting the health of Europeans in a rapidly changing world: a historical study of the implementation of World Health Organisation policies by the Nursing and Midwifery Unit, European Regional Office, 1970-2003 The World Health Organisation (WHO) was inaugurated in 1948. Formed in a period of post-war devastation, WHO aimed to develop and meet goals that would rebuild the health of shattered populations. The historical study reported here examined the work of the Nursing and Midwifery Unit (NMU) of WHO's European Regional Office during the later part of the twentieth century. The study examined archive sources lodged at the NMU archive. The sources included manuscripts relating to important NMU initiatives, reports and papers published by WHO, and a range of secondary sources. The study identified three main driving forces in the work of the NMU of the European Regional Office of WHO. One of the strongest of these was a drive to develop and promote the nursing profession within the countries of the European Region. The second was the promulgation and implementation of the positive public health strategies of WHO, particularly its '38 Targets for Health for All by the Year 2000'. The third focussed on securing equity across the European continent and on promoting the development of the nursing professions in poorer and less-developed countries. The study concludes that the nursing professions in European states grew in strength and influence, and that the health of populations improved throughout the continent between 1970 and 2003. It discusses the extent to which the role of the NMU in these advances may have been significant. © 2011 Blackwell Publishing Ltd.

Developing and evaluating rapid field methods to estimate peat carbon

Treesearch

Rodney A. Chimner; Cassandra A. Ott; Charles H. Perry; Randall K. Kolka

2014-01-01

Many international protocols (e.g., REDD+) are developing inventories of ecosystem carbon stocks and fluxes at country and regional scales, which can include peatlands. As the only nationally implemented field inventory and remeasurement of forest soils in the US, the USDA Forest Service Forest Inventory and Analysis Program (FIA) samples the top 20 cm of organic soils...

Policy of Education for the 21st Century in Developed and Developing Countries: Focus on Japan and Persian Gulf Region

ERIC Educational Resources Information Center

Arani, Mohammad Reza Sarkar

2004-01-01

Increasing globalization, information technology, based on a knowledge economy, and socio-economic changes are rapidly changing the goals, policies, curricula, contents and methods of education. The need to differentiate and re-thinking education and learning, both within and outside the school system, is gaining increased attention among…

Communications Technologies in Open and Distance Learning in Asia: The Experience of the Asian Development Bank.

ERIC Educational Resources Information Center

Sharma, Motilal

In view of financial constraints, large numbers of students to be educated, and rapid changes in information and communication and information technology, open learning (OL) and distance education (DE) systems are being established at an unprecedented rate in almost all developing countries of the Asian and Pacific region. Modern communications,…

Water for the cities - The outlook

USGS Publications Warehouse

Schneider, William Joseph; Spieker, Andrew Maute

1969-01-01

Rapid expansion of urban areas, particularly in the large metropolitan complexes of the United States, is placing urban political entities in ever closer juxtaposition to each other. The large demand for water for each entity is resulting in competition for available sources and is rapidly reaching critical proportions. Increasing awareness of the role of water in our society further complicates this competition. Pollution abatement, recreation, wildlife conservation, and aesthetics are demands now recognized by both rural and urban areas. Future development of water resources must consider regional demands and resources. Only in this way can our reasonably abundant water resources meet the severe demands imposed by our rapidly expanding urban areas.

Episodic growth of fold-thrust belts: Insights from Finite Element Modelling

NASA Astrophysics Data System (ADS)

Yang, Xiaodong; Peel, Frank J.; Sanderson, David J.; McNeill, Lisa C.

2017-09-01

The sequential development of a fold-thrust belt was investigated using 2D Finite Element Modelling (FEM). The new model results show that a thrust system is typically composed of three distinct regions: the thrust wedge, pre-wedge, and undeformed region. The thrust wedge involves growth that repeats episodically and cyclically. A cycle of wedge building starts as frontal accretion occurs, which is accompanied by a rapid increase in wedge width reducing the taper angle below critical. In response to this, the wedge interior (tracked here by the 50 m displacement position) rapidly propagates forwards into a region of incipient folding. The taper angle progressively increases until it obtains a constant apparent critical value (∼10°). During this period, the wedge experiences significant shortening after a new thrust initiates at the failure front, leading to a decrease in wedge width. Successive widening of the wedge and subsequent shortening and thrusting maintain a reasonably constant taper angle. The fold-thrust belt evolves cyclically, through a combination of rapid advancement of the wedge and subsequent gradual, slow wedge growth. The new model results also highlights that there is clear, although minor, deformation (0-10 m horizontal displacement) in front of the thrust wedge.

Assessing dementia in resource-poor regions.

PubMed

Maestre, Gladys E

2012-10-01

The numbers and proportions of elderly are increasing rapidly in developing countries, where prevalence of dementia is often high. Providing cost-effective services for dementia sufferers and their caregivers in these resource-poor regions poses numerous challenges; developing resources for diagnosis must be the first step. Capacity building for diagnosis involves training and education of healthcare providers, as well as the general public, development of infrastructure, and resolution of economic and ethical issues. Recent progress in some low-to-middle-income countries (LMICs) provides evidence that partnerships between wealthy and resource-poor countries, and between developing countries, can improve diagnostic capabilities. Without the involvement of the mental health community of developed countries in such capacity-building programs, dementia in the developing world is a disaster waiting to happen.

On the thermo-chemical origin of the stratified region at the top of the Earth's core

NASA Astrophysics Data System (ADS)

Nakagawa, Takashi

2018-03-01

I developed a combined model of the thermal and chemical evolution of the Earth's core and investigated its influence on a thermochemically stable region beneath the core-mantle boundary (CMB). The chemical effects of the growing stable region are caused by the equilibrium chemical reaction between silicate and the metallic core. The thermal effects can be characterized by the growth of the sub-isentropic shell, which may have a rapid growth rate compared to that of the chemically stable region. When the present-day CMB heat flow was varied, the origin of the stable region changed from chemical to thermochemical to purely thermal because the rapid growth of the sub-isentropic shell can replace the chemically stable region. Physically reasonable values of the present-day CMB heat flow that can maintain the geodynamo action over 4 billion years should be between 8 and 11 TW. To constrain the thickness of the thermochemically stable region beneath the CMB, the chemical diffusivity is important and should be ∼O(10-8) m2/s to obtain a thickness of the thermochemically stable region beneath the CMB consistent with that inferred from geomagnetic secular variations (140 km). However, the strength of the stable region found in this study is too high to be consistent with the constraint on the stability of the stable region inferred from geomagnetic secular variations.

Empowering local potential resources: strategies and challenges of vocational high school in East Java

NASA Astrophysics Data System (ADS)

Sadewo, FX S.; Utami, D.; Handoyo, P.; Pribadi, F.

2018-01-01

The low interest of entrepreneurship in Indonesia can be seen from two factors, namely cultural and structural. However, it can be addressed through education, one of its strategy is through Vocational Entrepreneurship development program based on the potential of the region. This research seeks to see the readiness of SMK in developing entrepreneurship program in accordance with the potential of the region. The research approach uses Rapid Assessment Procedure (RAP) method. The research location is SMK in Tuban, Jember, Malang, Kediri and Pamekasan. The subject of the research is the managerial side of the school, including the curriculum development team, the School Committee and Vice Principals of Curriculum. The results of this study indicate that all principals already know about the potential of the region and have tried entrepreneurial development based on the potential of the area.

Segmentation of the Hellenides recorded by Pliocene initiation of clockwise block rotation in Central Greece

NASA Astrophysics Data System (ADS)

Bradley, Kyle E.; Vassilakis, Emmanuel; Hosa, Aleksandra; Weiss, Benjamin P.

2013-01-01

New paleomagnetic data from Early Miocene to Pliocene terrestrial sedimentary and volcanic rocks in Central Greece constrain the history of vertical-axis rotation along the central part of the western limb of the Aegean arc. The present-day pattern of rapid block rotation within a broad zone of distributed deformation linking the right-lateral North Anatolian and Kephalonia continental transform faults initiated after Early Pliocene time, resulting in a uniform clockwise rotation of 24.3±6.5° over a region >250 km long and >150 km wide encompassing Central Greece and the western Cycladic archipelago. Because the published paleomagnetic dataset requires clockwise rotations of >50° in Western Greece after ˜17 Ma, while our measurements resolve no vertical-axis rotation of Central Greece between ˜15 Ma and post-Early Pliocene time, a large part of the clockwise rotation of Western Greece must have occurred during the main period of contraction within the external thrust belt of the Ionian Zone between ˜17 and ˜15 Ma. Pliocene initiation of rapid clockwise rotation in Central and Western Greece reflects the development of the North Anatolia-Kephalonia Fault system within the previously extended Aegean Sea region, possibly in response to entry of dense oceanic lithosphere of the Ionian Sea into the Hellenic subduction zone and consequent accelerated slab rollback. The development of the Aegean geometric arc therefore occurred in two short-duration pulses characterized by rapid rotation and strong regional deformation.

Development of VHH antibodies against dengue virus type 2 NS1 and comparison with monoclonal antibodies for use in immunological diagnosis.

PubMed

Fatima, Aneela; Wang, Haiying; Kang, Keren; Xia, Liliang; Wang, Ying; Ye, Wei; Wang, Jufang; Wang, Xiaoning

2014-01-01

The possibility of using variable domain heavy-chain antibodies (VHH antibodies) as diagnostic tools for dengue virus (DENV) type 2 NS1 protein was investigated and compared with the use of conventional monoclonal antibodies. After successful expression of DENV type 2 NS1 protein, the genes of VHH antibodies against NS1 protein were biopanned from a non-immune llama library by phage display. VHH antibodies were then expressed and purified from Escherichia coli. Simultaneously, monoclonal antibodies were obtained by the conventional route. Sequence analysis of the VHH antibodies revealed novel and long complementarity determining regions 3 (CDR3). Epitope mapping was performed via a phage display peptide library using purified VHH and monoclonal antibodies as targets. Interestingly, the same region of NS1, which comprises amino acids 224HWPKPHTLW232, was conserved for both kinds of antibodies displaying the consensus motif histidine-tryptophan-tryptophan or tryptophan-proline-tryptophan. The two types of antibodies were used to prepare rapid diagnostic kits based on immunochromatographic assay. The VHH antibody immobilized rapid diagnostic kit showed better sensitivity and specificity than the monoclonal antibody immobilized rapid diagnostic kit, which might be due to the long CDR3 regions of the VHH antibodies and their ability to bind to the pocket and cleft of the targeted antigen. This demonstrates that VHH antibodies are likely to be an option for developing point-of-care tests against DENV infection.

Development of VHH Antibodies against Dengue Virus Type 2 NS1 and Comparison with Monoclonal Antibodies for Use in Immunological Diagnosis

PubMed Central

Fatima, Aneela; Wang, Haiying; Kang, Keren; Xia, Liliang; Wang, Ying; Ye, Wei; Wang, Jufang; Wang, Xiaoning

2014-01-01

The possibility of using variable domain heavy-chain antibodies (VHH antibodies) as diagnostic tools for dengue virus (DENV) type 2 NS1 protein was investigated and compared with the use of conventional monoclonal antibodies. After successful expression of DENV type 2 NS1 protein, the genes of VHH antibodies against NS1 protein were biopanned from a non-immune llama library by phage display. VHH antibodies were then expressed and purified from Escherichia coli. Simultaneously, monoclonal antibodies were obtained by the conventional route. Sequence analysis of the VHH antibodies revealed novel and long complementarity determining regions 3 (CDR3). Epitope mapping was performed via a phage display peptide library using purified VHH and monoclonal antibodies as targets. Interestingly, the same region of NS1, which comprises amino acids 224HWPKPHTLW232, was conserved for both kinds of antibodies displaying the consensus motif histidine-tryptophan-tryptophan or tryptophan-proline-tryptophan. The two types of antibodies were used to prepare rapid diagnostic kits based on immunochromatographic assay. The VHH antibody immobilized rapid diagnostic kit showed better sensitivity and specificity than the monoclonal antibody immobilized rapid diagnostic kit, which might be due to the long CDR3 regions of the VHH antibodies and their ability to bind to the pocket and cleft of the targeted antigen. This demonstrates that VHH antibodies are likely to be an option for developing point-of-care tests against DENV infection. PMID:24751715

Development of Species-specific Primers for Rapid Detection of Phellinus linteus and P. baumii

PubMed Central

Kim, Mun-Ok; Kim, Gi-Young; Nam, Byung-Hyouk; Jin, Cheng-Yun; Lee, Ki-Won; Park, Jae-Min; Lee, Sang-Joon

2005-01-01

Genus Phellinus taxonomically belongs to Aphyllophorales and some species of this genus have been used as a medicinal ingredients and Indian folk medicines. Especially, P. linteus and morphological-related species are well-known medicinal fungi that have various biological activities such as humoral and cell-mediated, anti-mutagenic, and anti-cancer activities. However, little is known about the rapid detection for complex Phellinus species. Therefore, this study was carried out to develop specific primers for the rapid detection of P. linteus and other related species. Designing the species-specific primers was done based on internal transcribed spacer sequence data. Each primer set detected specifically P. linteus (PL2/PL5R) and P. baumii (PB1/PB4R). These primer sets could be useful for the rapid detection of specific-species among unidentified Phellinus species. Moreover, restriction fragment length polymorphism analysis of the ITS region with HaeIII was also useful for clarifying the relationship between each 5 Phellinus species. PMID:24049482

Ecosystem services provided by Pacific NW estuaries: State of knowledge - March 3, 2011

EPA Science Inventory

Coastal regions in the United States are rapidly developing areas, with increasing urbanization and growing populations. Estuarine and nearshore coastal marine waters provide valuable ecosystem services to resident and transient human communities. In the Pacific Northwest (PNW) ...

ASSESSING VULNERABILITIES FROM ALTERNATIVE DEVELOPMENT PATTERNS

EPA Science Inventory

Planners in a rapidly urbanizing area must take into account trade offs between multiple environmental issues of concern. A 15-county region centered on Charlotte, North Carolina, is experiencing a boom in growth resulting in both air and water quality concerns. In this paper,...

Sensor performance analysis

NASA Technical Reports Server (NTRS)

Montgomery, H. E.; Ostrow, H.; Ressler, G. M.

1990-01-01

The theory is described and the equations required to design are developed and the performance of electro-optical sensor systems that operate from the visible through the thermal infrared spectral regions are analyzed. Methods to compute essential optical and detector parameters, signal-to-noise ratio, MTF, and figures of merit such as NE delta rho and NE delta T are developed. A set of atmospheric tables are provided to determine scene radiance in the visible spectral region. The Planck function is used to determine radiance in the infrared. The equations developed were incorporated in a spreadsheet so that a wide variety of sensor studies can be rapidly and efficiently conducted.

Rapid long-wave infrared laser-induced breakdown spectroscopy measurements using a mercury-cadmium-telluride linear array detection system.

PubMed

Yang, Clayton S-C; Brown, Eiei; Kumi-Barimah, Eric; Hommerich, Uwe; Jin, Feng; Jia, Yingqing; Trivedi, Sudhir; D'souza, Arvind I; Decuir, Eric A; Wijewarnasuriya, Priyalal S; Samuels, Alan C

2015-11-20

In this work, we develop a mercury-cadmium-telluride linear array detection system that is capable of rapidly capturing (∼1-5  s) a broad spectrum of atomic and molecular laser-induced breakdown spectroscopy (LIBS) emissions in the long-wave infrared (LWIR) region (∼5.6-10  μm). Similar to the conventional UV-Vis LIBS, a broadband emission spectrum of condensed phase samples covering the whole 5.6-10 μm region can be acquired from just a single laser-induced microplasma or averaging a few single laser-induced microplasmas. Atomic and molecular signature emission spectra of solid inorganic and organic tablets and thin liquid films deposited on a rough asphalt surface are observed. This setup is capable of rapidly probing samples "as is" without the need of elaborate sample preparation and also offers the possibility of a simultaneous UV-Vis and LWIR LIBS measurement.

Identifying hotspots and management of critical ecosystem services in rapidly urbanizing Yangtze River Delta Region, China.

PubMed

Cai, Wenbo; Gibbs, David; Zhang, Lang; Ferrier, Graham; Cai, Yongli

2017-04-15

Rapid urbanization has altered many ecosystems, causing a decline in many ecosystem services, generating serious ecological crisis. To cope with these challenges, we presented a comprehensive framework comprising five core steps for identifying and managing hotspots of critical ecosystem services in a rapid urbanizing region. This framework was applied in the case study of the Yangtze River Delta (YRD) Region. The study showed that there was large spatial heterogeneity in the hotspots of ecosystem services in the region, hotspots of supporting services and regulating services aggregately distributing in the southwest mountainous areas while hotspots of provisioning services mainly in the northeast plain, and hotspots of cultural services widespread in the waterbodies and southwest mountainous areas. The regionalization of the critical ecosystem services was made through the hotspot analysis. This study provided valuable information for environmental planning and management in a rapid urbanizing region and helped improve China's ecological redlines policy at regional scale. Copyright © 2017 Elsevier Ltd. All rights reserved.

NASA Helps Build Colorado Economy

NASA Image and Video Library

2010-12-13

NASA Deputy Administrator Lori Garver delivers remarks at the Colorado State Capitol in Denver on Monday, Dec. 13, 2010, prior to signing an agreement that creates a Technology Acceleration Program and Regional Innovation Cluster for Aerospace and Clean Energy. A manufacturing park focused on rapid new product development and production will be developed to assist growing Colorado businesses while promoting the commercialization of technology developed for the space program. Photo Credit: (NASA/Bill Ingalls)

Development and Validation of the International Baccalaureate Learner Profile Questionnaire (IBLPQ)

ERIC Educational Resources Information Center

Walker, Allan; Lee, Moosung; Bryant, Darren A.

2016-01-01

The Learner Profile (LP) frames International Baccalaureate (IB) learning outcomes across the three programme levels and, as such, plays a key role in measuring the success of the rapidly growing number of IB schools in the Asia-Pacific Region. Our aim was to develop an instrument to measure the IBLP and validate the instrument through a series of…

Interagency partnering for weed prevention--progress on development of a National Early Detection and Rapid Response System for Invasive Plants in the United States

USGS Publications Warehouse

Westbrooks, R.; Westbrooks, R.

2011-01-01

Over the past 50 years, experience has shown that interagency groups provide an effective forum for addressing various invasive species issues and challenges on multiple land units. However, more importantly, they can also provide a coordinated framework for early detection, reporting, identification and vouchering, rapid assessment, and rapid response to new and emerging invasive plants in the United States. Interagency collaboration maximizes the use of available expertise, resources, and authority for promoting early detection and rapid response (EDRR) as the preferred management option for addressing new and emerging invasive plants. Currently, an interagency effort is underway to develop a National EDRR System for Invasive Plants in the United States. The proposed system will include structural and informational elements. Structural elements of the system include a network of interagency partner groups to facilitate early detection and rapid response to new invasive plants, including the Federal Interagency Committee for the Management of Noxious and Exotic Weeds (FICMNEW), State Invasive Species Councils, State Early Detection and Rapid Response Coordinating Committees, State Volunteer Detection and Reporting Networks, Invasive Plant Task Forces, and Cooperative Weed Management Areas. Informational elements and products being developed include Regional Invasive Plant Atlases, and EDRR Guidelines for EDRR Volunteer Network Training, Rapid Assessment and Rapid Response, and Criteria for Selection of EDRR Species. System science and technical support elements which are provided by cooperating state and federal scientists, include EDRR guidelines, training curriculum for EDRR volunteers and agency field personnel, plant identification and vouchering, rapid assessments, as well as predictive modeling and ecological range studies for invasive plant species.

Environmental Education in a Region of Rapid Economic Development: The Case of Sarawak.

ERIC Educational Resources Information Center

Gough, Stephen.

1995-01-01

Discusses an innovative approach to environmental education that takes into account the interactions between cultural diversity and environmental controversy. Examines the situation in Sarawak, a State of East Malaysia, in the light of existing theoretical work. Contains 21 references. (JRH)

Highways and outposts: economic development and health threats in the central Brazilian Amazon region

PubMed Central

2010-01-01

Background Economic development is often evoked as a driving force that has the capacity to improve the social and health conditions of remote areas. However, development projects produce uneven impacts on local communities, according to their different positions within society. This study examines the spatial distribution of three major health threats in the Brazilian Amazon region that may undergo changes through highway construction. Homicide mortality, AIDS incidence and malaria prevalence rates were calculated for 70 municipalities located within the areas of influence of the Cuiabá-Santarém highway (BR-163), i.e. in the western part of the state of Pará state and the northern part of Mato Grosso. Results The municipalities were characterized using social and economic indicators such as gross domestic product (GDP), urban and indigenous populations, and recent migration. The municipalities' connections to the region's main transportation routes (BR-163 and Trans-Amazonian highways, along with the Amazon and Tapajós rivers) were identified by tagging the municipalities that have boundaries crossing these routes, using GIS overlay operations. Multiple regression was used to identify the major driving forces and constraints relating to the distribution of health threats. The main explanatory variables for higher malaria prevalence were: proximity to the Trans-Amazonian highway, high proportion of indigenous population and low proportion of migrants. High homicide rates were associated with high proportions of migrants, while connection to the Amazon River played a protective role. AIDS incidence was higher in municipalities with recent increases in GDP and high proportions of urban population. Conclusions Highways induce social and environmental changes and play different roles in spreading and maintaining diseases and health threats. The most remote areas are still protected against violence but are vulnerable to malaria. Rapid economic and demographic growth increases the risk of AIDS transmission and violence. Highways connect secluded localities and may threaten local populations. This region has been undergoing rapid localized development booms, thus creating outposts of rapid and temporary migration, which may introduce health risks to remote areas. PMID:20553625

Empirical research on coordination evaluation and sustainable development mechanism of regional logistics and new-type urbanization: a panel data analysis from 2000 to 2015 for Liaoning Province in China.

PubMed

Sun, Qiang

2017-06-01

As the largest developing country in the world, China has witnessed fast-paced urbanization over the past three decades with rapid economic growth. In fact, urbanization has been not only shown to promote economic growth and improve the livelihood of people but also can increase demands of regional logistics. Therefore, a better understanding of the relationship between urbanization and regional logistics is important for China's future sustainable development. The development of urban residential area and heterogeneous, modern society as well regional logistics are running two abreast. The regional logistics can promote the development of new-type urbanization jointly by promoting industrial concentration and logistics demand, enhancing the residents' quality of life and improving the infrastructure and logistics technology. In this paper, the index system and evaluation model for evaluating the development of regional logistics and the new-type urbanization are constructed. Further, the econometric analysis is utilized such as correlation analysis, co-integration test, and error correction model to explore relationships of the new-type urbanization development and regional logistics development in Liaoning Province. The results showed that there was a long-term stable equilibrium relationship between the new-type urbanization and regional logistics. The findings have important implications for Chinese policymakers that on the path towards a sustainable urbanization and regional reverse, this must be taken into consideration. The paper concludes providing some strategies that might be helpful to the policymakers in formulating development policies for sustainable urbanization.

Development and Evaluation of Reverse Transcription-Loop-Mediated Isothermal Amplification (RT-LAMP) Assay Coupled with a Portable Device for Rapid Diagnosis of Ebola Virus Disease in Guinea

PubMed Central

Kurosaki, Yohei; Magassouba, N’Faly; Oloniniyi, Olamide K.; Cherif, Mahamoud S.; Sakabe, Saori; Takada, Ayato; Hirayama, Kenji; Yasuda, Jiro

2016-01-01

Given the current absence of specific drugs or vaccines for Ebola virus disease (EVD), rapid, sensitive, and reliable diagnostic methods are required to stem the transmission chain of the disease. We have developed a rapid detection assay for Zaire ebolavirus based on reverse transcription-loop-mediated isothermal amplification (RT-LAMP) and coupled with a novel portable isothermal amplification and detection platform. The RT-LAMP assay is based on primer sets that target the untranscribed trailer region or nucleoprotein coding region of the viral RNA. The test could specifically detect viral RNAs of Central and West African Ebola virus strains within 15 minutes with no cross-reactivity to other hemorrhagic fever viruses and arboviruses, which cause febrile disease. The assay was evaluated using a total of 100 clinical specimens (serum, n = 44; oral swab, n = 56) collected from suspected EVD cases in Guinea. The specificity of this diagnostic test was 100% for both primer sets, while the sensitivity was 100% and 97.9% for the trailer and nucleoprotein primer sets, respectively, compared with a reference standard RT-PCR test. These observations suggest that our diagnostic assay is useful for identifying EVD cases, especially in the field or in settings with insufficient infrastructure. PMID:26900929

Development and Evaluation of Reverse Transcription-Loop-Mediated Isothermal Amplification (RT-LAMP) Assay Coupled with a Portable Device for Rapid Diagnosis of Ebola Virus Disease in Guinea.

PubMed

Kurosaki, Yohei; Magassouba, N'Faly; Oloniniyi, Olamide K; Cherif, Mahamoud S; Sakabe, Saori; Takada, Ayato; Hirayama, Kenji; Yasuda, Jiro

2016-02-01

Given the current absence of specific drugs or vaccines for Ebola virus disease (EVD), rapid, sensitive, and reliable diagnostic methods are required to stem the transmission chain of the disease. We have developed a rapid detection assay for Zaire ebolavirus based on reverse transcription-loop-mediated isothermal amplification (RT-LAMP) and coupled with a novel portable isothermal amplification and detection platform. The RT-LAMP assay is based on primer sets that target the untranscribed trailer region or nucleoprotein coding region of the viral RNA. The test could specifically detect viral RNAs of Central and West African Ebola virus strains within 15 minutes with no cross-reactivity to other hemorrhagic fever viruses and arboviruses, which cause febrile disease. The assay was evaluated using a total of 100 clinical specimens (serum, n = 44; oral swab, n = 56) collected from suspected EVD cases in Guinea. The specificity of this diagnostic test was 100% for both primer sets, while the sensitivity was 100% and 97.9% for the trailer and nucleoprotein primer sets, respectively, compared with a reference standard RT-PCR test. These observations suggest that our diagnostic assay is useful for identifying EVD cases, especially in the field or in settings with insufficient infrastructure.

The analysis of factors of management of safety of critical information infrastructure with use of dynamic models

NASA Astrophysics Data System (ADS)

Trostyansky, S. N.; Kalach, A. V.; Lavlinsky, V. V.; Lankin, O. V.

2018-03-01

Based on the analysis of the dynamic model of panel data by region, including fire statistics for surveillance sites and statistics of a set of regional socio-economic indicators, as well as the time of rapid response of the state fire service to fires, the probability of fires in the surveillance sites and the risk of human death in The result of such fires from the values of the corresponding indicators for the previous year, a set of regional social-economics factors, as well as regional indicators time rapid response of the state fire service in the fire. The results obtained are consistent with the results of the application to the fire risks of the model of a rational offender. Estimation of the economic equivalent of human life from data on surveillance objects for Russia, calculated on the basis of the analysis of the presented dynamic model of fire risks, correctly agrees with the known literary data. The results obtained on the basis of the econometric approach to fire risks allow us to forecast fire risks at the supervisory sites in the regions of Russia and to develop management solutions to minimize such risks.

The Impact of Computer Science on the Development of Oulu ICT during 1985-1990

NASA Astrophysics Data System (ADS)

Oinas-Kukkonen, Henry; Similä, Jouni; Pulli, Petri; Oinas-Kukkonen, Harri; Kerola, Pentti

The region of Oulu has been emphasizing the importance of electronics industry for its business growth since the 1960s. After a pitch-dark recession, the region developed in the 1990s into a new, well-established hub of information and communication technology (ICT) in Finland. The city with its 100,000 inhabitants occupied nearly 10,000 ICT professionals in 1995. This article will contribute to the body of research knowledge through analyzing the role of computer science, in particular information systems and software engineering, for the development of the ICT industry in Oulu in the latter half of the 1980s. This analysis is based on a variety of both primary and secondary sources. This article suggests that the system-theoretical and software-oriented research expertise played a key role for the rapid and successful ICT business development of the Oulu region.

Rapid detection and differentiation of avian infectious bronchitis virus: an application of Mass genotype by melting temperature analysis in RT-qPCR using SYBR Green I

PubMed Central

OKINO, Cintia Hiromi; MONTASSIER, Maria de Fátima Silva; de OLIVEIRA, Andressa Peres; MONTASSIER, Helio José

2018-01-01

A method based on Melting Temperature analysis of Hypervariable regions (HVR) of S1 gene within a RT-qPCR was developed to detect different genotypes of avian infectious bronchitis virus (IBV) and identify the Mass genotype. The method was able to rapidly identify the Mass genotype among IBV field isolates, vaccine attenuated strains and reference M41 strain in allantoic liquid and also directly in tissues. The RT-qPCR developed detected the virus in both tracheal and pulmonary samples from M41-infected or H120-infected birds, in a larger post-infection period compared to detection by standard method of virus isolation. RT-qPCR method tested provided a sensitivity and rapid approach for screening on IBV detection and Mass genotyping from IBV isolates. PMID:29491226

Science data in support of environmental health studies in the U.S.-Mexico border region

USGS Publications Warehouse

Buckler, Denny; Strom, Eric

2004-01-01

The border region of the United States and Mexico encompasses a vast and diverse array of physical settings and habitats that include wetlands, deserts, rangeland, mountains, and forests, which are unique in terms of the diversity of their water, mineral, and biological resources. The region is interconnected economically, politically, and socially owing to its binational heritage. In 1995, nearly 11 million people lived immediately adjacent to the border. By one account, that population could more than double by 2020. This rapid population growth and consequent economic development and land-use changes are pushing the limits of environmental sustainability and quality. Infrastructure development has lagged behind the rapid growth of the region, resulting in a shortage of water for municipal, agricultural, and industrial uses. These stressors threaten the quality of life in the region and raise concerns about the interdependence of environmental quality and human health. To allow for continued economic growth while protecting the area’s natural resources and fostering a high quality of life, the United States and Mexico need an improved understanding of the threats posed by these anthropogenic changes.Issues of particular concern include (1) contaminants in ground water, surface water, and biota from agricultural, municipal, and industrial activities; (2) airborne pollutants from fossil-fuel combustion and other activities; (3) contaminants from past and present mining activities and mineral deposits; and (4) pathogens, pharmaceuticals, hormones, and other contaminants released in treated and untreated human and animal wastewaters.

The Developmental Cognitive Neuroscience of Functional Connectivity

ERIC Educational Resources Information Center

Stevens, Michael C.

2009-01-01

Developmental cognitive neuroscience is a rapidly growing field that examines the relationships between biological development and cognitive ability. In the past decade, there has been ongoing refinement of concepts and methodology related to the study of "functional connectivity" among distributed brain regions believed to underlie cognition and…

CICS Region Virtualization for Cost Effective Application Development

ERIC Educational Resources Information Center

Khan, Kamal Waris

2012-01-01

Mainframe is used for hosting large commercial databases, transaction servers and applications that require a greater degree of reliability, scalability and security. Customer Information Control System (CICS) is a mainframe software framework for implementing transaction services. It is designed for rapid, high-volume online processing. In order…

Rapid, ultrasensitive detection of microorganisms based on interferometry and lab-on-a-chip nanotechnology

NASA Astrophysics Data System (ADS)

Ymeti, Aurel; Nederkoorn, Paul H. J.; Dudia, Alma; Subramaniam, Vinod; Kanger, Johannes S.

2009-05-01

Future viral outbreaks are a major threat to societal and economic development throughout the world. A rapid, sensitive, and easy-to-use test for viral infections is essential to prevent and to control such viral pandemics. Furthermore, a compact, portable device is potentially very useful in remote or developing regions without easy access to sophisticated laboratory facilities. We have developed a rapid, ultrasensitive sensor that could be used in a handheld device to detect various viruses and measure their concentration. The essential innovation in this technique is the combination of an integrated optical interferometric sensor with antibody-antigen recognition approaches to yield a very sensitive, very rapid test for virus detection. The sensor is able to spot the herpes virus at concentrations of just 850 particles per milliliter under physiological conditions. The sensitivity of the sensor approaches detection of a single virus particle, yielding a sensor of unprecedented sensitivity with wide applications for viral diagnostics. The sensor's detection principle can be extended to any biological target such as bacteria, cells and proteins and for which there are specific antibodies. The nature of the sensor enables multiplexed detection of several analytes at the same time.

An energy-economy-environment model for simulating the impacts of socioeconomic development on energy and environment.

PubMed

Wang, Wenyi; Zeng, Weihua; Yao, Bo

2014-01-01

Many rapidly developing regions have begun to draw the attention of the world. Meanwhile, the energy and environmental issues associated with rapid economic growth have aroused widespread critical concern. Therefore, studying energy, economic, and environmental systems is of great importance. This study establishes a system dynamic model that covers multiple aspects of those systems, such as energy, economy, population, water pollution, air pollution, solid waste, and technology. The model designed here attempts to determine the impacts of socioeconomic development on the energy and environment of Tongzhou District in three scenarios: under current, planning, and sustainable conditions. The results reveal that energy shortages and water pollutions are very serious and are the key issues constraining future social and economic development. Solid waste emissions increase with population growth. The prediction results provide valuable insights into social advancement.

NASA Helps Build Colorado Economy

NASA Image and Video Library

2010-12-13

Colorado State Governor Bill Ritter delivers remarks at the Colorado State Capitol in Denver on Monday, Dec. 13, 2010, prior to the signing of an agreement with NASA that creates a Technology Acceleration Program and Regional Innovation Cluster for Aerospace and Clean Energy. A manufacturing park focused on rapid new product development and production will be developed to assist growing Colorado businesses while promoting the commercialization of technology developed for the space program. Photo Credit: (NASA/Bill Ingalls)

Sequencing intractable DNA to close microbial genomes.

PubMed

Hurt, Richard A; Brown, Steven D; Podar, Mircea; Palumbo, Anthony V; Elias, Dwayne A

2012-01-01

Advancement in high throughput DNA sequencing technologies has supported a rapid proliferation of microbial genome sequencing projects, providing the genetic blueprint for in-depth studies. Oftentimes, difficult to sequence regions in microbial genomes are ruled "intractable" resulting in a growing number of genomes with sequence gaps deposited in databases. A procedure was developed to sequence such problematic regions in the "non-contiguous finished" Desulfovibrio desulfuricans ND132 genome (6 intractable gaps) and the Desulfovibrio africanus genome (1 intractable gap). The polynucleotides surrounding each gap formed GC rich secondary structures making the regions refractory to amplification and sequencing. Strand-displacing DNA polymerases used in concert with a novel ramped PCR extension cycle supported amplification and closure of all gap regions in both genomes. The developed procedures support accurate gene annotation, and provide a step-wise method that reduces the effort required for genome finishing.

Small but Dynamic Active Region

NASA Image and Video Library

2018-04-20

The sun featured just one, rather small active region over the past few days, but it developed rapidly and sported a lot of magnetic activity in just one day (Apr. 11-12, 2018). The activity was observed in a wavelength of extreme ultraviolet light. The loops and twisting arches above it are evidence of magnetic forces tangling with each other. The video clip was produced using Helioviewer software. Movies are available at https://photojournal.jpl.nasa.gov/catalog/PIA06676

Regional income inequality model based on theil index decomposition and weighted variance coeficient

NASA Astrophysics Data System (ADS)

Sitepu, H. R.; Darnius, O.; Tambunan, W. N.

2018-03-01

Regional income inequality is an important issue in the study on economic development of a certain region. Rapid economic development may not in accordance with people’s per capita income. The method of measuring the regional income inequality has been suggested by many experts. This research used Theil index and weighted variance coefficient in order to measure the regional income inequality. Regional income decomposition which becomes the productivity of work force and their participation in regional income inequality, based on Theil index, can be presented in linear relation. When the economic assumption in j sector, sectoral income value, and the rate of work force are used, the work force productivity imbalance can be decomposed to become the component in sectors and in intra-sectors. Next, weighted variation coefficient is defined in the revenue and productivity of the work force. From the quadrate of the weighted variation coefficient result, it was found that decomposition of regional revenue imbalance could be analyzed by finding out how far each component contribute to regional imbalance which, in this research, was analyzed in nine sectors of economic business.

Spectra of double-cumulative photons in the central rapidity region at high transverse momenta

NASA Astrophysics Data System (ADS)

Alekseev, I. G.; Golubev, A. A.; Goryachev, V. S.; Dzubenko, G. B.; Dolgolenko, A. G.; Zhigareva, N. M.; Kiselev, S. M.; Mikhaylov, K. R.; Morozova, E. A.; Polozov, P. A.; Prokudin, M. S.; Romanov, D. V.; Svirida, D. N.; Stavinsky, A. V.; Stolin, V. L.; Sharkov, G. B.

2015-11-01

The spectra of photons produced in the interaction between carbon ions of kinetic energy 2.0 and 3.2 GeV per nucleon and beryllium nuclei were measured at the FLINT facility by means of electromagnetic calorimeters that is deployed at the accelerator of the Institute for Theoretical and Experimental Physics (ITEP, Moscow). The spectra in question were measured in the central rapidity region (at angles between 35° and 73° in the laboratory frame) at photon energies of 1 to 3 GeV by using a cumulative-photon trigger. An analysis of the data obtained in this way reveals that the interaction of multinucleon fluctuation in the projectile nucleus with a multinucleon fluctuation in the target nucleus is a dominant process that leads to photon production in the measured region of angles and momenta. As a development of the generally accepted terminology, an interaction of this type may be called a double cumulative interaction.

[Prediction and simulation of urban area expansion in Pearl River Delta Region under the RCPs climate scenarios].

PubMed

Jiang, Oun-ou; Deng, Xiang-zheng; Ke, Xin-li; Zhao, Chun-hong; Zhang, Wei

2014-12-01

The sizes and number of cities in China are increasing rapidly and complicated changes of urban land use system have occurred as the social economy develops rapidly. This study took the urban agglomeration of Pearl River Delta Region as the study area to explore the driving mechanism of dynamic changes of urban area in the urbanization process under the joint influence of natural environment and social economic conditions. Then the CA (cellular automata) model was used to predict and simulate the urban area changes until 2030 under the designed scenarios of planning and RCPs (representative concentration pathways). The results indicated that urbanization was mainly driven by the non-agricultural population growth and social-economic development, and the transportation had played a fundamental role in the whole process, while the areas with high elevation or steep slope restricted the urbanization. Besides, the urban area would keep an expanding trend regardless of the scenarios, however, the expanding speed would slow down with different inflection points under different scenarios. The urban expansion speed increased in the sequence of the planning scenario, MESSAGE scenario and AIM scenario, and that under the MESSAGE climate scenario was more consistent with the current urban development trend. In addition, the urban expansion would mainly concentrate in regions with the relatively high urbanization level, e.g., Guangzhou, Dongguan, Foshan, Shenzhen, Zhanjiang and Chaoshan.

Rapid Industrial Development, Competition, and Relative Economic Status: A Study in Human Ecology. Working Paper RID 73.10.

ERIC Educational Resources Information Center

Summers, Gene F.; Clemente, Frank

The document has 3 goals (1) to examine the distribution of economic benefits of industrial development as reflected by the concept of competition in human ecology; (2) to provide an empirical test of the ecological model, and (3) to relate the findings to public policy. Two Illinois study areas were identified. First, as an experimental region,…

Focused exhumation along megathrust splay faults in Prince William Sound, Alaska

USGS Publications Warehouse

Haeussler, Peter J.; Armstrong, Phillip A; Liberty, Lee M; Ferguson, Kelly M; Finn, Shaun P; Arkle, Jeannette C; Pratt, Thomas L.

2015-01-01

Megathrust splay faults are a common feature of accretionary prisms and can be important for generating tsunamis during some subduction zone earthquakes. Here we provide new evidence from Alaska that megathrust splay faults have been conduits for focused exhumation in the last 5 Ma. In most of central Prince William Sound, published and new low-temperature thermochronology data indicate little to no permanent rock uplift over tens of thousands of earthquake cycles. However, in southern Prince William Sound on Montague Island, apatite (U–Th)/He ages are as young as 1.1 Ma indicating focused and rapid rock uplift. Montague Island lies in the hanging wall of the Patton Bay megathrust splay fault system, which ruptured during the 1964 M9.2 earthquake and produced ∼9 m of vertical uplift. Recent geochronology and thermochronology studies show rapid exhumation within the last 5 Ma in a pattern similar to the coseismic uplift in the 1964 earthquake, demonstrating that splay fault slip is a long term (3–5 my) phenomena. The region of slower exhumation correlates with rocks that are older and metamorphosed and constitute a mechanically strong backstop. The region of rapid exhumation consists of much younger and weakly metamorphosed rocks, which we infer are mechanically weak. The region of rapid exhumation is separated from the region of slow exhumation by the newly identified Montague Strait Fault. New sparker high-resolution bathymetry, seismic reflection profiles, and a 2012 Mw4.8 earthquake show this feature as a 75-km-long high-angle active normal fault. There are numerous smaller active normal(?) faults in the region between the Montague Strait Fault and the splay faults. We interpret this hanging wall extension as developing between the rapidly uplifting sliver of younger and weaker rocks on Montague Island from the essentially fixed region to the north. Deep seismic reflection profiles show the splay faults root into the subduction megathrust where there is probable underplating. Thus the exhumation and extension in the hanging wall are likely driven by underplating along the megathrust décollement, thickening in the overriding plate and a change in rheology at the Montague Strait Fault to form a structural backstop. A comparison with other megathrust splay faults around the world shows they have significant variability in their characteristics, and the conditions for their formation are not particularly unique.

A Decision Mixture Model-Based Method for Inshore Ship Detection Using High-Resolution Remote Sensing Images

PubMed Central

Bi, Fukun; Chen, Jing; Zhuang, Yin; Bian, Mingming; Zhang, Qingjun

2017-01-01

With the rapid development of optical remote sensing satellites, ship detection and identification based on large-scale remote sensing images has become a significant maritime research topic. Compared with traditional ocean-going vessel detection, inshore ship detection has received increasing attention in harbor dynamic surveillance and maritime management. However, because the harbor environment is complex, gray information and texture features between docked ships and their connected dock regions are indistinguishable, most of the popular detection methods are limited by their calculation efficiency and detection accuracy. In this paper, a novel hierarchical method that combines an efficient candidate scanning strategy and an accurate candidate identification mixture model is presented for inshore ship detection in complex harbor areas. First, in the candidate region extraction phase, an omnidirectional intersected two-dimension scanning (OITDS) strategy is designed to rapidly extract candidate regions from the land-water segmented images. In the candidate region identification phase, a decision mixture model (DMM) is proposed to identify real ships from candidate objects. Specifically, to improve the robustness regarding the diversity of ships, a deformable part model (DPM) was employed to train a key part sub-model and a whole ship sub-model. Furthermore, to improve the identification accuracy, a surrounding correlation context sub-model is built. Finally, to increase the accuracy of candidate region identification, these three sub-models are integrated into the proposed DMM. Experiments were performed on numerous large-scale harbor remote sensing images, and the results showed that the proposed method has high detection accuracy and rapid computational efficiency. PMID:28640236

A Decision Mixture Model-Based Method for Inshore Ship Detection Using High-Resolution Remote Sensing Images.

PubMed

Bi, Fukun; Chen, Jing; Zhuang, Yin; Bian, Mingming; Zhang, Qingjun

2017-06-22

With the rapid development of optical remote sensing satellites, ship detection and identification based on large-scale remote sensing images has become a significant maritime research topic. Compared with traditional ocean-going vessel detection, inshore ship detection has received increasing attention in harbor dynamic surveillance and maritime management. However, because the harbor environment is complex, gray information and texture features between docked ships and their connected dock regions are indistinguishable, most of the popular detection methods are limited by their calculation efficiency and detection accuracy. In this paper, a novel hierarchical method that combines an efficient candidate scanning strategy and an accurate candidate identification mixture model is presented for inshore ship detection in complex harbor areas. First, in the candidate region extraction phase, an omnidirectional intersected two-dimension scanning (OITDS) strategy is designed to rapidly extract candidate regions from the land-water segmented images. In the candidate region identification phase, a decision mixture model (DMM) is proposed to identify real ships from candidate objects. Specifically, to improve the robustness regarding the diversity of ships, a deformable part model (DPM) was employed to train a key part sub-model and a whole ship sub-model. Furthermore, to improve the identification accuracy, a surrounding correlation context sub-model is built. Finally, to increase the accuracy of candidate region identification, these three sub-models are integrated into the proposed DMM. Experiments were performed on numerous large-scale harbor remote sensing images, and the results showed that the proposed method has high detection accuracy and rapid computational efficiency.

Rapid breeding and varietal replacement are critical to adaptation of cropping systems in the developing world to climate change.

PubMed

Atlin, Gary N; Cairns, Jill E; Das, Biswanath

2017-03-01

Plant breeding is a key mechanism for adaptation of cropping systems to climate change. Much discussion of breeding for climate change focuses on genes with large effects on heat and drought tolerance, but phenology and stress tolerance are highly polygenic. Adaptation will therefore mainly result from continually adjusting allele frequencies at many loci through rapid-cycle breeding that delivers a steady stream of incrementally improved cultivars. This will require access to elite germplasm from other regions, shortened breeding cycles, and multi-location testing systems that adequately sample the target population of environments. The objective of breeding and seed systems serving smallholder farmers should be to ensure that they use varieties developed in the last 10 years. Rapid varietal turnover must be supported by active dissemination of new varieties, and active withdrawal of obsolete ones. Commercial seed systems in temperate regions achieve this through competitive seed markets, but in the developing world, most crops are not served by competitive commercial seed systems, and many varieties date from the end of the Green Revolution (the late 1970s, when the second generation of modern rice and wheat varieties had been widely adopted). These obsolete varieties were developed in a climate different than today's, placing farmers at risk. To reduce this risk, a strengthened breeding system is needed, with freer international exchange of elite varieties, short breeding cycles, high selection intensity, wide-scale phenotyping, and accurate selection supported by genomic technology. Governments need to incentivize varietal release and dissemination systems to continuously replace obsolete varieties.

Modeling of subglacial hydrological development following rapid supraglacial lake drainage.

PubMed

Dow, C F; Kulessa, B; Rutt, I C; Tsai, V C; Pimentel, S; Doyle, S H; van As, D; Lindbäck, K; Pettersson, R; Jones, G A; Hubbard, A

2015-06-01

The rapid drainage of supraglacial lakes injects substantial volumes of water to the bed of the Greenland ice sheet over short timescales. The effect of these water pulses on the development of basal hydrological systems is largely unknown. To address this, we develop a lake drainage model incorporating both (1) a subglacial radial flux element driven by elastic hydraulic jacking and (2) downstream drainage through a linked channelized and distributed system. Here we present the model and examine whether substantial, efficient subglacial channels can form during or following lake drainage events and their effect on the water pressure in the surrounding distributed system. We force the model with field data from a lake drainage site, 70 km from the terminus of Russell Glacier in West Greenland. The model outputs suggest that efficient subglacial channels do not readily form in the vicinity of the lake during rapid drainage and instead water is evacuated primarily by a transient turbulent sheet and the distributed system. Following lake drainage, channels grow but are not large enough to reduce the water pressure in the surrounding distributed system, unless preexisting channels are present throughout the domain. Our results have implications for the analysis of subglacial hydrological systems in regions where rapid lake drainage provides the primary mechanism for surface-to-bed connections. Model for subglacial hydrological analysis of rapid lake drainage eventsLimited subglacial channel growth during and following rapid lake drainagePersistence of distributed drainage in inland areas where channel growth is limited.

Modeling of subglacial hydrological development following rapid supraglacial lake drainage

PubMed Central

Dow, C F; Kulessa, B; Rutt, I C; Tsai, V C; Pimentel, S; Doyle, S H; van As, D; Lindbäck, K; Pettersson, R; Jones, G A; Hubbard, A

2015-01-01

The rapid drainage of supraglacial lakes injects substantial volumes of water to the bed of the Greenland ice sheet over short timescales. The effect of these water pulses on the development of basal hydrological systems is largely unknown. To address this, we develop a lake drainage model incorporating both (1) a subglacial radial flux element driven by elastic hydraulic jacking and (2) downstream drainage through a linked channelized and distributed system. Here we present the model and examine whether substantial, efficient subglacial channels can form during or following lake drainage events and their effect on the water pressure in the surrounding distributed system. We force the model with field data from a lake drainage site, 70 km from the terminus of Russell Glacier in West Greenland. The model outputs suggest that efficient subglacial channels do not readily form in the vicinity of the lake during rapid drainage and instead water is evacuated primarily by a transient turbulent sheet and the distributed system. Following lake drainage, channels grow but are not large enough to reduce the water pressure in the surrounding distributed system, unless preexisting channels are present throughout the domain. Our results have implications for the analysis of subglacial hydrological systems in regions where rapid lake drainage provides the primary mechanism for surface-to-bed connections. Key Points Model for subglacial hydrological analysis of rapid lake drainage events Limited subglacial channel growth during and following rapid lake drainage Persistence of distributed drainage in inland areas where channel growth is limited PMID:26640746

Development of a high-speed real-time PCR system for rapid and precise nucleotide recognition

NASA Astrophysics Data System (ADS)

Terazono, Hideyuki; Takei, Hiroyuki; Hattori, Akihiro; Yasuda, Kenji

2010-04-01

Polymerase chain reaction (PCR) is a common method used to create copies of a specific target region of a DNA sequence and to produce large quantities of DNA. A few DNA molecules, which act as templates, are rapidly amplified by PCR into many billions of copies. PCR is a key technology in genome-based biological analysis, revolutionizing many life science fields such as medical diagnostics, food safety monitoring, and countermeasures against bioterrorism. Thus, many applications have been developed with the thermal cycling. For these PCR applications, one of the most important key factors is reduction in the data acquisition time. To reduce the acquisition time, it is necessary to decrease the temperature transition time between the high and low ends as much as possible. We have developed a novel rapid real-time PCR system based on rapid exchange of media maintained at different temperatures. This system consists of two thermal reservoirs and a reaction chamber for PCR observation. The temperature transition was achieved within 0.3 sec, and good thermal stability was achieved during thermal cycling with rapid exchange of circulating media. This system allows rigorous optimization of the temperatures required for each stage of the PCR processes. Resulting amplicons were confirmed by electrophoresis. Using the system, rapid DNA amplification was accomplished within 3.5 min, including initial heating and complete 50 PCR cycles. It clearly shows that the device could allow us faster temperature switching than the conventional conduction-based heating systems based on Peltier heating/cooling.

Optofluidic refractive-index sensors employing bent waveguide structures for low-cost, rapid chemical and biomedical sensing.

PubMed

Liu, I-Chen; Chen, Pin-Chuan; Chau, Lai-Kwan; Chang, Guo-En

2018-01-08

We propose and develop an intensity-detection-based refractive-index (RI) sensor for low-cost, rapid RI sensing. The sensor is composed of a polymer bent ridge waveguide (BRWG) structure on a low-cost glass substrate and is integrated with a microfluidic channel. Different-RI solutions flowing through the BRWG sensing region induce output optical power variations caused by optical bend losses, enabling simple and real-time RI detection. Additionally, the sensors are fabricated using rapid and cost-effective vacuum-less processes, attaining the low cost and high throughput required for mass production. A good RI solution of 5.31 10 -4 × RIU -1 is achieved from the RI experiments. This study demonstrates mass-producible and compact RI sensors for rapid and sensitive chemical analysis and biomedical sensing.

Vascular structure determines pulmonary blood flow distribution

NASA Technical Reports Server (NTRS)

Hlastala, M. P.; Glenny, R. W.

1999-01-01

Scientific knowledge develops through the evolution of new concepts. This process is usually driven by new methodologies that provide observations not previously available. Understanding of pulmonary blood flow determinants advanced significantly in the 1960s and is now changing rapidly again, because of increased spatial resolution of regional pulmonary blood flow measurements.

Effects of simulated acid rain on the allelopathic potential of invasive weed Wedelia trilobata

USDA-ARS?s Scientific Manuscript database

Acid rain continues to pose a major threat to natural ecosystems in rapidly-developing industrialized regions such as southern China. Despite the significant environmental impact of this phenomenon, relatively little is known concerning its effects on important aspects of ecosystem dynamics such as ...

Target-Specific Assay for Rapid and Quantitative Detection of Mycobacterium chimaera DNA

PubMed Central

Zozaya-Valdés, Enrique; Porter, Jessica L.; Coventry, John; Fyfe, Janet A. M.; Carter, Glen P.; Gonçalves da Silva, Anders; Schultz, Mark B.; Seemann, Torsten; Johnson, Paul D. R.; Stewardson, Andrew J.; Bastian, Ivan; Roberts, Sally A.; Howden, Benjamin P.; Williamson, Deborah A.

2017-01-01

ABSTRACT Mycobacterium chimaera is an opportunistic environmental mycobacterium belonging to the Mycobacterium avium-M. intracellulare complex. Although most commonly associated with pulmonary disease, there has been growing awareness of invasive M. chimaera infections following cardiac surgery. Investigations suggest worldwide spread of a specific M. chimaera clone, associated with contaminated hospital heater-cooler units used during the surgery. Given the global dissemination of this clone, its potential to cause invasive disease, and the laboriousness of current culture-based diagnostic methods, there is a pressing need to develop rapid and accurate diagnostic assays specific for M. chimaera. Here, we assessed 354 mycobacterial genome sequences and confirmed that M. chimaera is a phylogenetically coherent group. In silico comparisons indicated six DNA regions present only in M. chimaera. We targeted one of these regions and developed a TaqMan quantitative PCR (qPCR) assay for M. chimaera with a detection limit of 100 CFU/ml in whole blood spiked with bacteria. In vitro screening against DNA extracted from 40 other mycobacterial species and 22 bacterial species from 21 diverse genera confirmed the in silico-predicted specificity for M. chimaera. Screening 33 water samples from heater-cooler units with this assay highlighted the increased sensitivity of PCR compared to culture, with 15 of 23 culture-negative samples positive by M. chimaera qPCR. We have thus developed a robust molecular assay that can be readily and rapidly deployed to screen clinical and environmental specimens for M. chimaera. PMID:28381604

Target-Specific Assay for Rapid and Quantitative Detection of Mycobacterium chimaera DNA.

PubMed

Zozaya-Valdés, Enrique; Porter, Jessica L; Coventry, John; Fyfe, Janet A M; Carter, Glen P; Gonçalves da Silva, Anders; Schultz, Mark B; Seemann, Torsten; Johnson, Paul D R; Stewardson, Andrew J; Bastian, Ivan; Roberts, Sally A; Howden, Benjamin P; Williamson, Deborah A; Stinear, Timothy P

2017-06-01

Mycobacterium chimaera is an opportunistic environmental mycobacterium belonging to the Mycobacterium avium - M. intracellulare complex. Although most commonly associated with pulmonary disease, there has been growing awareness of invasive M. chimaera infections following cardiac surgery. Investigations suggest worldwide spread of a specific M. chimaera clone, associated with contaminated hospital heater-cooler units used during the surgery. Given the global dissemination of this clone, its potential to cause invasive disease, and the laboriousness of current culture-based diagnostic methods, there is a pressing need to develop rapid and accurate diagnostic assays specific for M. chimaera Here, we assessed 354 mycobacterial genome sequences and confirmed that M. chimaera is a phylogenetically coherent group. In silico comparisons indicated six DNA regions present only in M. chimaera We targeted one of these regions and developed a TaqMan quantitative PCR (qPCR) assay for M. chimaera with a detection limit of 100 CFU/ml in whole blood spiked with bacteria. In vitro screening against DNA extracted from 40 other mycobacterial species and 22 bacterial species from 21 diverse genera confirmed the in silico -predicted specificity for M. chimaera Screening 33 water samples from heater-cooler units with this assay highlighted the increased sensitivity of PCR compared to culture, with 15 of 23 culture-negative samples positive by M. chimaera qPCR. We have thus developed a robust molecular assay that can be readily and rapidly deployed to screen clinical and environmental specimens for M. chimaera . Copyright © 2017 American Society for Microbiology.

Organizational HIV monitoring and evaluation capacity rapid needs assessment: the case of Kenya.

PubMed

Mbondo, Mwende; Scherer, Jennifer; Aluoch, Gilbert Onyango; Sundsmo, Aaron; Mwaura, Njeri

2013-01-01

Due to the commitment by the Government of Kenya (GoK) and international donors to address HIV/AIDS, Kenya has some of Africa's most developed health infrastructure for tackling the crisis. Despite this commitment, significant gaps exist in the national HIV/AIDS monitoring and evaluation (M&E) system. To identify these gaps and opportunities for improvement, the U.S. Centers for Disease Control and Prevention funded the Strengthening HIV Strategic Information in Kenya project, which conducted an organizational HIV M&E capacity rapid needs assessment (RNA). The project included an in-depth desk review of national documents, policies, tools, and international best practices. National, regional, and district officials from government agencies, development partners, and implementing partners participated in key informant interviews and focus group discussions. Given the large number of regions and districts, purposive sampling was used to select 16 facilities in 8 districts across 2 regions based on the general quality of the reported HIV data and the number of partners supporting the regions. RNA findings revealed tremendous improvements at the national level and in the various subsystems that contribute to the overall HIV strategic information. There also were significant gaps, including in a lack of M&E guidelines, parallel reporting systems, feedback given to subnational levels, and data use and general data management and use capacity at subnational levels. An urgent need exists for the development of national M&E guidelines and a comprehensive training curriculum. To ensure success further, capacity building for subnational levels should be conducted and feedback channels to subnational staff should be established and maintained.

Water Security, Climate Forcings and Public Health Impacts in Emerging Regions

NASA Astrophysics Data System (ADS)

Serman, E. A.; Akanda, A. S.; Craver, V.; Boving, T. B.

2014-12-01

Our world is rapidly urbanizing, with more than 80% of world's population is expected to be living in a city by the end of the century. A majority of these nations are rapidly urbanizing due to massive rural-to-urban migratory trends, with rapid development of unplanned urban settlements, or slums, with lack of adequate water or sanitation facilities and other municipal amenities. With global environmental change, natural disasters will expose millions more to drought, floods, and disease epidemics, and existing vulnerabilities will worsen. At the same time, rapid urbanization and fast changing land-use leads to widespread damage of infrastructure by stormwater, especially in lowlands and economically poor areas. The factor that consistently stands out among different cities from both the developed and the developing worlds is that the slums are typically the most vulnerable to water related natural hazards and climatic threats, such as water scarcity and quality issues in drought conditions, or water and sanitation breakdown and stormwater contamination problems. Onsite or decentralized water, wastewater and stormwater treatment as well as point-of-use water treatment options can be an economic, safe, and reliable alternative to conventional large-scale treatment especially, in urban fringes as well as rural areas. These systems can be designed to fit communities in terms of their economic, cultural, environmental, and demographic resources. As part of this study, we develop a database of urban water quality and quantity indices such as with urban land-use, water usage, climate, and socio-economic characteristics in various emerging regions in the world. We analyze past and current data to identify and quantify long-term trends and the impacts of large-scale climatic and anthropogenic changes on urban hydrology and health impacts. We specifically focus on five major cities from distinct groups of countries and geographies: Providence, RI, USA from the developed world, Lagos, Nigeria, Lima, Peru and Jakarta, Indonesia from the Middle-Income Countries, and Dhaka, Bangladesh from the Least Developed Countries, to compare and contrast leading drivers and sensitivities of water, climate, and health indicators.

Rapid rate of control-region evolution in Pacific butterflyfishes (Chaetodontidae).

PubMed

McMillan, W O; Palumbi, S R

1997-11-01

Sequence differences in the tRNA-proline (tRNApro) end of the mitochondrial control-region of three species of Pacific butterflyfishes accumulated 33-43 times more rapidly than did changes within the mitochondrial cytochrome b gene (cytb). Rapid evolution in this region was accompanied by strong transition/transversion bias and large variation in the probability of a DNA substitution among sites. These substitution constraints placed an absolute ceiling on the magnitude of sequence divergence that could be detected between individuals. This divergence "ceiling" was reached rapidly and led to a decay in the relative rate of control-region/cytb b evolution. A high rate of evolution in this section of the control-region of butterflyfishes stands in marked contrast to the patterns reported in some other fish lineages. Although the mechanism underlying rate variation remains unclear, all taxa with rapid evolution in the 5'-end of the control-region showed extreme transition biases. By contrast, in taxa with slower control-region evolution, transitions accumulated at nearly the same rate as transversions. More information is needed to understand the relationship between nucleotide bias and the rate of evolution in the 5'-end of the control-region. Despite strong constraints on sequence change, phylogenetic information was preserved in the group of recently differentiated species and supported the clustering of sequences into three major mtDNA groupings. Within these groups, very similar control-region sequences were widely distributed across the Pacific Ocean and were shared between recognized species, indicating a lack of mitochondrial sequence monophyly among species.

Dynamics in the Chromosphere Imaged at Four Second Cadence

NASA Astrophysics Data System (ADS)

Schmit, D.; De Pontieu, B.

2017-12-01

In this work we present analysis of rapid intensity fluctuations that are observed in the chromosphere and transition region using the slit-jaw datasets of IRIS and CLASP. While chromospheric oscillations have been a topic of interest for 30 years, the instrumentation to image those dynamics at high-cadence has only recently been developed. We use filtergraph data from 1215A, 2800A, and 1400A to examine the occurrence rate and morphology of rapid intensity fluctuations in different magnetic environments. There are indications of rapidly propagating disturbances with phase speeds greater than 100 km/s in all passbands although the morphology of the features differs significantly between passbands. The relationship between intensity fluctuations, spicules, and waves is discussed.

A case of succinic semialdehyde dehydrogenase deficiency with status epilepticus and rapid regression.

PubMed

Horino, Asako; Kawawaki, Hisashi; Fukuoka, Masataka; Tsuji, Hitomi; Hattori, Yuka; Inoue, Takeshi; Nukui, Megumi; Kuki, Ichiro; Okazaki, Shin; Tomiwa, Kiyotaka; Hirose, Shinichi

2016-10-01

Clinical phenotypic expression of SSADH deficiency is highly heterogeneous, and some infants may develop refractory secondary generalized seizures. A 9-month-old boy manifested partial seizures, developing severe status epilepticus, and conventional antiepileptic drugs were ineffective. Use of ketamine contributed to the control of status epilepticus, achieving a reduction in frequency of partial seizures, and improving EEG findings without apparent complications. Diffusion-weighted images showed hyperintensities in the bilateral basal ganglia and fornix, and multiple T2 hyperintensity lesions were detected. (123)I-iomazenil (IMZ) SPECT revealed a decrease in binding of (123)I-iomazenil predominantly in the left temporal region by the 18th day of hospitalization. However, repeated IMZ-SPECT on the 46th day of hospitalization demonstrated almost no accumulation across a broad region, sparing the left temporal region. The patient showed rapid regression, refractory myoclonus, and severe progressive brain atrophy. IMZ-SPECT findings demonstrated reduced benzodiazepine receptor binding and its dynamic changes in an SSADH-deficient patient. Considering the down regulation of the GABAA receptor, ketamine should be included in pharmacotherapeutic strategies for treatment of refractory status epilepticus in SSADH-deficient patients. Copyright © 2016 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.

Technical Education and Vocational Training in Central Africa. Feasibility Survey of the Regional Development of Rapid Vocational Training: Cameroon, Central African Republic, Chad, and Gabon.

ERIC Educational Resources Information Center

Organization for Rehabilitation through Training, Geneva (Switzerland).

This final report is the result of a survey requested by the United States Agency for International Development (USAID) and undertaken by the Organization for Rehabilitation through Training (ORT) of four countries (Cameroon, Chad, Central African Republic, and Gabon) and a conference on vocational training sponsored by the Economic and Customs…

An Energy-Economy-Environment Model for Simulating the Impacts of Socioeconomic Development on Energy and Environment

PubMed Central

Yao, Bo

2014-01-01

Many rapidly developing regions have begun to draw the attention of the world. Meanwhile, the energy and environmental issues associated with rapid economic growth have aroused widespread critical concern. Therefore, studying energy, economic, and environmental systems is of great importance. This study establishes a system dynamic model that covers multiple aspects of those systems, such as energy, economy, population, water pollution, air pollution, solid waste, and technology. The model designed here attempts to determine the impacts of socioeconomic development on the energy and environment of Tongzhou District in three scenarios: under current, planning, and sustainable conditions. The results reveal that energy shortages and water pollutions are very serious and are the key issues constraining future social and economic development. Solid waste emissions increase with population growth. The prediction results provide valuable insights into social advancement. PMID:24683332

Modeling for regional ecosystem sustainable development under uncertainty--A case study of Dongying, China.

PubMed

Zhang, K; Li, Y P; Huang, G H; You, L; Jin, S W

2015-11-15

In this study, a superiority-inferiority two-stage stochastic programming (STSP) method is developed for planning regional ecosystem sustainable development. STSP can tackle uncertainties expressed as fuzzy sets and probability distributions; it can be used to analyze various policy scenarios that are associated with different levels of economic penalties when the promised targets are violated. STSP is applied to a real case of planning regional ecosystem sustainable development in the City of Dongying, where ecosystem services valuation approaches are incorporated within the optimization process. Regional ecosystem can provide direct and indirect services and intangible benefits to local economy. Land trading mechanism is introduced for planning the regional ecosystem's sustainable development, where wetlands are buyers who would protect regional ecosystem components and self-organization and maintain its integrity. Results of regional ecosystem activities, land use patterns, and land trading schemes have been obtained. Results reveal that, although large-scale reclamation projects can bring benefits to the local economy development, they can also bring with negative effects to the coastal ecosystem; among all industry activities oil field is the major contributor with a large number of pollutant discharges into local ecosystem. Results also show that uncertainty has an important role in successfully launching such a land trading program and trading scheme can provide more effective manner to sustain the regional ecosystem. The findings can help decision makers to realize the sustainable development of ecological resources in the process of rapid industrialization, as well as the integration of economic and ecological benefits. Copyright © 2015 Elsevier B.V. All rights reserved.

Permafrost and urban Development in Norilsk Russia.

NASA Astrophysics Data System (ADS)

Shiklomanov, N. I.; Streletskiy, D. A.; Grebenets, V. I.

2017-12-01

The city of Norilsk was established in 1935 as a GULAG mining and metallurgy work camp to explore the rich deposits of non-ferrous metals. By the 1989, the population of Norilsk reached 179,757 people. Two additional cities were developed in proximity to Norilsk in the 1960s-1980s: Talnakh (1989 population 65,710); and Kaerkan (1989 population 29,824) making the Norilsk region a major Arctic metropolis. While such rapid growth is not unusual for developing industrial cities, the geographic location makes Norilsk rather unique among world urban centers. It was built in Central Siberia at 69°51' N latitude (above the Arctic Circle), in region characterized by harsh subarctic climate (mean annual temperature around -10 oC), over forest tundra/tundra transitional landscapes underlined by perennially frozen ground (permafrost). Throughout its existence, the Norilsk region was highly isolated: it is not connected to Russian road and railroad systems. The harsh environmental conditions provided significant and rather unique challenges to Norilsk development. Specifically, the presence of ice-rich permafrost imposed restrictions on application of standard urban planning and engineering practices. This presentation analyzes the history of permafrost construction in Norilsk. It shows how though initial trial and errors, a set of guiding principles and engineering methods of construction on permafrost were developed allowing a rapid urbanization of the area during the 1960-1980s. However, despite significant advances in permafrost engineering, the pronounced permafrost degradation has become evident in Norilsk by the mid 1980s and has accelerated rapidly since the mid 1990s resulting in widespread deformation of buildings. Climatic changes are frequently identified as a major cause of accelerated deterioration of infrastructure build on permafrost. However, we argue that other factors, including the complexity of interactions between deferent components of urban infrastructure and permafrost, quality of construction, operation, and maintenance of infrastructure as well as socio-economic transformations are also responsible for emergence and intensification of the negative permafrost-related geotechnical processes manifested by the structural deformations of buildings in Norilsk.

Transverse vetoes with rapidity cutoff in SCET

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hornig, Andrew; Kang, Daekyoung; Makris, Yiannis

We consider di-jet production in hadron collisions where a transverse veto is imposed on radiation for (pseudo-)rapidities in the central region only, where this central region is defined with rapidity cutoff. For the case where the transverse measurement (e.g., transverse energy or min p T for jet veto) is parametrically larger relative to the typical transverse momentum beyond the cutoff, the cross section is insensitive to the cutoff parameter and is factorized in terms of collinear and soft degrees of freedom. The virtuality for these degrees of freedom is set by the transverse measurement, as in typical transverse-momentum dependent observablesmore » such as Drell-Yan, Higgs production, and the event shape broadening. This paper focuses on the other region, where the typical transverse momentum below and beyond the cutoff is of similar size. In this region the rapidity cutoff further resolves soft radiation into (u)soft and soft-collinear radiation with different rapidities but identical virtuality. This gives rise to rapidity logarithms of the rapidity cutoff parameter which we resum using renormalization group methods. We factorize the cross section in this region in terms of soft and collinear functions in the framework of soft-collinear effective theory, then further refactorize the soft function as a convolution of the (u)soft and soft-collinear functions. All these functions are calculated at one-loop order. As an example, we calculate a differential cross section for a specific partonic channel, qq ' → qq ' , for the jet shape angularities and show that the refactorization allows us to resum the rapidity logarithms and significantly reduce theoretical uncertainties in the jet shape spectrum.« less

Transverse vetoes with rapidity cutoff in SCET

DOE PAGES

Hornig, Andrew; Kang, Daekyoung; Makris, Yiannis; ...

2017-12-11

We consider di-jet production in hadron collisions where a transverse veto is imposed on radiation for (pseudo-)rapidities in the central region only, where this central region is defined with rapidity cutoff. For the case where the transverse measurement (e.g., transverse energy or min p T for jet veto) is parametrically larger relative to the typical transverse momentum beyond the cutoff, the cross section is insensitive to the cutoff parameter and is factorized in terms of collinear and soft degrees of freedom. The virtuality for these degrees of freedom is set by the transverse measurement, as in typical transverse-momentum dependent observablesmore » such as Drell-Yan, Higgs production, and the event shape broadening. This paper focuses on the other region, where the typical transverse momentum below and beyond the cutoff is of similar size. In this region the rapidity cutoff further resolves soft radiation into (u)soft and soft-collinear radiation with different rapidities but identical virtuality. This gives rise to rapidity logarithms of the rapidity cutoff parameter which we resum using renormalization group methods. We factorize the cross section in this region in terms of soft and collinear functions in the framework of soft-collinear effective theory, then further refactorize the soft function as a convolution of the (u)soft and soft-collinear functions. All these functions are calculated at one-loop order. As an example, we calculate a differential cross section for a specific partonic channel, qq ' → qq ' , for the jet shape angularities and show that the refactorization allows us to resum the rapidity logarithms and significantly reduce theoretical uncertainties in the jet shape spectrum.« less

Funding emergency medicine development in low- and middle-income countries.

PubMed

Doney, Michael K; Smith, Jeffrey; Kapur, G Bobby

2005-02-01

The specialty of EM is developing rapidly throughout the world. This growth is relatively lacking in the LICs, however. The lack of resources and financing capabilities in these regions may hinder specialty development. Further growth of the specialty in these countries requires an understanding of their health priorities and the global health and development agencies that often assist these countries in supporting the health sector. Identifying health priorities in these regions that intersect with EM is crucial and may form the basis for further expansion of EM. Many potential funding opportunities exist within the governmental and private sector, but all require some familiarity with application mechanisms and project cycles. Building relationships with personnel within these agencies and countries of interest is often fundamental to successful programmatic funding.

Plates and Mantle Convection: A Far-From Equilibrium Self-Organized System

NASA Astrophysics Data System (ADS)

King, S. D.; Lowman, J. P.; Gable, C. W.

2001-12-01

A common observation of plate tectonics is that plate velocities change over short time scales. Some have speculated that these reorganization events are triggered by evolving plate boundaries. This work presents an alternative mechanism, due to the interaction of mobil plates and internally heated convection. We present numerical models of 3D Cartesian convection in an internally-heated fluid with mobile plates that exhibit rapid changes in plate motion. A persistent feature of these calculations is that plate motion is relatively uniform punctuated by rapid reorganization events where plate speed and direction change over a short time period. The rapid changes in plate motion result solely from the interaction of internally-heated convection and the mobile plates. Without plates, the convective planform of an internally-heated fluid evolves into a pattern with a larger number of small cells. When plates are included, the fluid is dominated by plate-scale structures; however, isolated regions develop where heat builds up. These isolated regions are near the location of mature slabs where the plates are older and thicker. As the system evolves, the temperature (and buoyancy) in these isolated regions increases, they become unstable and, as they rise, the net force on the plate is no longer dominated by `slab pull' from the mature slab. The plate reorganization allows the system to transfer heat from the short-wavelength, internal-heating scale, to the longer-wavelength, plate-cooling scale. As we will demonstrate, the interaction between plate motions and the mantle is sufficiently dynamic that evolving plate boundaries are not necessary to achieve rapid changes in plate motion.

Dynamics and forecast in a simple model of sustainable development for rural populations.

PubMed

Angulo, David; Angulo, Fabiola; Olivar, Gerard

2015-02-01

Society is becoming more conscious on the need to preserve the environment. Sustainable development schemes have grown rapidly as a tool for managing, predicting and improving the growth path in different regions and economy sectors. We introduce a novel and simple mathematical model of ordinary differential equations (ODEs) in order to obtain a dynamical description for each one of the sustainability components (economy, social development and environment conservation), together with their dependence with demographic dynamics. The main part in the modeling task is inspired by the works by Cobb, Douglas, Brander and Taylor. This is completed through some new insights by the authors. A model application is presented for three specific geographical rural regions in Caldas (Colombia).

Regional risk assessment approaches to land planning for industrial polluted areas in China: the Hulunbeier region case study.

PubMed

Li, Daiqing; Zhang, Chen; Pizzol, Lisa; Critto, Andrea; Zhang, Haibo; Lv, Shihai; Marcomini, Antonio

2014-04-01

The rapid industrial development and urbanization processes that occurred in China over the past 30years has increased dramatically the consumption of natural resources and raw materials, thus exacerbating the human pressure on environmental ecosystems. In result, large scale environmental pollution of soil, natural waters and urban air were recorded. The development of effective industrial planning to support regional sustainable economy development has become an issue of serious concern for local authorities which need to select safe sites for new industrial settlements (i.e. industrial plants) according to assessment approaches considering cumulative impacts, synergistic pollution effects and risks of accidental releases. In order to support decision makers in the development of efficient and effective regional land-use plans encompassing the identification of suitable areas for new industrial settlements and areas in need of intervention measures, this study provides a spatial regional risk assessment methodology which integrates relative risk assessment (RRA) and socio-economic assessment (SEA) and makes use of spatial analysis (GIS) methodologies and multicriteria decision analysis (MCDA) techniques. The proposed methodology was applied to the Chinese region of Hulunbeier which is located in eastern Inner Mongolia Autonomous Region, adjacent to the Republic of Mongolia. The application results demonstrated the effectiveness of the proposed methodology in the identification of the most hazardous and risky industrial settlements, the most vulnerable regional receptors and the regional districts which resulted to be the most relevant for intervention measures since they are characterized by high regional risk and excellent socio-economic development conditions. Copyright © 2013 Elsevier Ltd. All rights reserved.

A regionally-adapted implementation of conservation agriculture delivers rapid improvements to soil properties associated with crop yield stability.

PubMed

Williams, Alwyn; Jordan, Nicholas R; Smith, Richard G; Hunter, Mitchell C; Kammerer, Melanie; Kane, Daniel A; Koide, Roger T; Davis, Adam S

2018-05-31

Climate models predict increasing weather variability, with negative consequences for crop production. Conservation agriculture (CA) may enhance climate resilience by generating certain soil improvements. However, the rate at which these improvements accrue is unclear, and some evidence suggests CA can lower yields relative to conventional systems unless all three CA elements are implemented: reduced tillage, sustained soil cover, and crop rotational diversity. These cost-benefit issues are important considerations for potential adopters of CA. Given that CA can be implemented across a wide variety of regions and cropping systems, more detailed and mechanistic understanding is required on whether and how regionally-adapted CA can improve soil properties while minimizing potential negative crop yield impacts. Across four US states, we assessed short-term impacts of regionally-adapted CA systems on soil properties and explored linkages with maize and soybean yield stability. Structural equation modeling revealed increases in soil organic matter generated by cover cropping increased soil cation exchange capacity, which improved soybean yield stability. Cover cropping also enhanced maize minimum yield potential. Our results demonstrate individual CA elements can deliver rapid improvements in soil properties associated with crop yield stability, suggesting that regionally-adapted CA may play an important role in developing high-yielding, climate-resilient agricultural systems.

Workers in an Integrating World. World Development Report, 1995. Executive Summary.

ERIC Educational Resources Information Center

World Bank, Washington, DC.

This executive summary examines the rapid changes occurring in economic markets and employment around the world. The report concludes that problems of low incomes, poor working conditions, and insecurity affecting many of the world's workers can be tackled effectively in ways that reduce poverty and regional inequality. Sound domestic policy and a…

Development of rapid methods for measuring stream ecosystem functions in the Appalachian coal mining region: preliminary results

EPA Science Inventory

Headwater streams represent the majority of U.S. stream miles. As a consequence of being abundant and widespread, the alteration and loss of headwater streams may have impacts on downstream waterbodies. These streams are frequently the subject of proposed dredge and fill projects...

Comparison of Students' Success in an International Technology Certificate Program

ERIC Educational Resources Information Center

Delialioglu, Omer; Oncu, Semiral; Cakir, Hasan

2008-01-01

There has been a rapid increase in the number of technology certificate programs offered around the world in the last decade. While designing, developing, and implementing these programs little or no consideration is given to geographical, cultural and developmental differences between different regions of the world. This study investigates the…

The Hispanic Project for Architecture and Building Construction

ERIC Educational Resources Information Center

Dail, Edward; Mora, Jorge

2006-01-01

John Tyler Community College in Chester, Virginia, began a program in architecture and building construction in fall 2003 to meet the needs of the Hispanic community--a much neglected but rapidly growing segment of the regional population. After first hiring a Hispanic director (Mr. Jorge Mora), a program was developed that heavily involved the…

DOES ANTHROPOGENIC ACTIVITIES OR NATURE DOMINATE THE SHAPING OF THE LANDSCDAPE IN THE OREGON PILOT STUDY AREA FOR 1990-1999?

EPA Science Inventory

Climatic variation and human activities are major factors resulting in land degradation in arid and semi-arid lands. In the Mediterranean region and over history, climatic drying was coincidental with developing agricultural technology and the rapid increase of the population and...

DOES ANTHROPOGENIC ACTIVITIES OR NATURE DOMINATE THE SHAPING OF THE LANDSCAPE IN THE OREGON PILOT STUDY AREA FOR 1990-1999?

EPA Science Inventory

Climatic variation and human activities are major factors resulting in land degradation in arid and semiarid lands. In the Mediterranean region and over history, climatic drying was coincidental with developing agricultural technology and the rapid increase of the population and ...

Development of Loop-Mediated Isothermal Amplification (LAMP) Assay for Rapid Detection of Cannabis sativa.

PubMed

Kitamura, Masashi; Aragane, Masako; Nakamura, Kou; Watanabe, Kazuhito; Sasaki, Yohei

2016-07-01

In many parts of the world, the possession and cultivation of Cannabis sativa L. are restricted by law. As chemical or morphological analyses cannot identify the plant in some cases, a simple yet accurate DNA-based method for identifying C. sativa is desired. We have developed a loop-mediated isothermal amplification (LAMP) assay for the rapid identification of C. sativa. By optimizing the conditions for the LAMP reaction that targets a highly conserved region of tetrahydrocannabinolic acid (THCA) synthase gene, C. sativa was identified within 50 min at 60-66°C. The detection limit was the same as or higher than that of conventional PCR. The LAMP assay detected all 21 specimens of C. sativa, showing high specificity. Using a simple protocol, the identification of C. sativa could be accomplished within 90 min from sample treatment to detection without use of special equipment. A rapid, sensitive, highly specific, and convenient method for detecting and identifying C. sativa has been developed and is applicable to forensic investigations and industrial quality control.

Strategies in Ebola virus disease (EVD) diagnostics at the point of care.

PubMed

Coarsey, Chad T; Esiobu, Nwadiuto; Narayanan, Ramswamy; Pavlovic, Mirjana; Shafiee, Hadi; Asghar, Waseem

2017-11-01

Ebola virus disease (EVD) is a devastating, highly infectious illness with a high mortality rate. The disease is endemic to regions of Central and West Africa, where there is limited laboratory infrastructure and trained staff. The recent 2014 West African EVD outbreak has been unprecedented in case numbers and fatalities, and has proven that such regional outbreaks can become a potential threat to global public health, as it became the source for the subsequent transmission events in Spain and the USA. The urgent need for rapid and affordable means of detecting Ebola is crucial to control the spread of EVD and prevent devastating fatalities. Current diagnostic techniques include molecular diagnostics and other serological and antigen detection assays; which can be time-consuming, laboratory-based, often require trained personnel and specialized equipment. In this review, we discuss the various Ebola detection techniques currently in use, and highlight the potential future directions pertinent to the development and adoption of novel point-of-care diagnostic tools. Finally, a case is made for the need to develop novel microfluidic technologies and versatile rapid detection platforms for early detection of EVD.

Historical and future land use effects on N2O and NO emissions using an ensemble modeling approach: Costa Rica's Caribbean lowlands as an example

USGS Publications Warehouse

Reiners, William A.; Liu, S.; Gerow, K.G.; Keller, M.; Schimel, D.S.

2002-01-01

[1] The humid tropical zone is a major source area for N2O and NO emissions to the atmosphere. Local emission rates vary widely with local conditions, particularly land use practices which swiftly change with expanding settlement and changing market conditions. The combination of wide variation in emission rates and rapidly changing land use make regional estimation and future prediction of biogenic trace gas emission particularly difficult. This study estimates contemporary, historical, and future N2O and NO emissions from 0.5 million ha of northeastern Costa Rica, a well-documented region in the wet tropics undergoing rapid agricultural development. Estimates were derived by linking spatially distributed environmental data with an ecosystem simulation model in an ensemble estimation approach that incorporates the variance and covariance of spatially distributed driving variables. Results include measures of variance for regional emissions. The formation and aging of pastures from forest provided most of the past temporal change in N2O and NO flux in this region; future changes will be controlled by the degree of nitrogen fertilizer application and extent of intensively managed croplands.

Historical and future land use effects on N2O and NO emissions using an ensemble modeling approach: Costa Rica's Caribbean lowlands as an example

NASA Astrophysics Data System (ADS)

Reiners, W. A.; Liu, S.; Gerow, K. G.; Keller, M.; Schimel, D. S.

2002-12-01

The humid tropical zone is a major source area for N2O and NO emissions to the atmosphere. Local emission rates vary widely with local conditions, particularly land use practices which swiftly change with expanding settlement and changing market conditions. The combination of wide variation in emission rates and rapidly changing land use make regional estimation and future prediction of biogenic trace gas emission particularly difficult. This study estimates contemporary, historical, and future N2O and NO emissions from 0.5 million ha of northeastern Costa Rica, a well-documented region in the wet tropics undergoing rapid agricultural development. Estimates were derived by linking spatially distributed environmental data with an ecosystem simulation model in an ensemble estimation approach that incorporates the variance and covariance of spatially distributed driving variables. Results include measures of variance for regional emissions. The formation and aging of pastures from forest provided most of the past temporal change in N2O and NO flux in this region; future changes will be controlled by the degree of nitrogen fertilizer application and extent of intensively managed croplands.

Current progress of immunoinformatics approach harnessed for cellular- and antibody-dependent vaccine design.

PubMed

Kazi, Ada; Chuah, Candy; Majeed, Abu Bakar Abdul; Leow, Chiuan Herng; Lim, Boon Huat; Leow, Chiuan Yee

2018-03-12

Immunoinformatics plays a pivotal role in vaccine design, immunodiagnostic development, and antibody production. In the past, antibody design and vaccine development depended exclusively on immunological experiments which are relatively expensive and time-consuming. However, recent advances in the field of immunological bioinformatics have provided feasible tools which can be used to lessen the time and cost required for vaccine and antibody development. This approach allows the selection of immunogenic regions from the pathogen genomes. The ideal regions could be developed as potential vaccine candidates to trigger protective immune responses in the hosts. At present, epitope-based vaccines are attractive concepts which have been successfully trailed to develop vaccines which target rapidly mutating pathogens. In this article, we provide an overview of the current progress of immunoinformatics and their applications in the vaccine design, immune system modeling and therapeutics.

Spatial econometric analysis of factors influencing regional energy efficiency in China.

PubMed

Song, Malin; Chen, Yu; An, Qingxian

2018-05-01

Increased environmental pollution and energy consumption caused by the country's rapid development has raised considerable public concern, and has become the focus of the government and public. This study employs the super-efficiency slack-based model-data envelopment analysis (SBM-DEA) to measure the total factor energy efficiency of 30 provinces in China. The estimation model for the spatial interaction intensity of regional total factor energy efficiency is based on Wilson's maximum entropy model. The model is used to analyze the factors that affect the potential value of total factor energy efficiency using spatial dynamic panel data for 30 provinces during 2000-2014. The study found that there are differences and spatial correlations of energy efficiency among provinces and regions in China. The energy efficiency in the eastern, central, and western regions fluctuated significantly, and was mainly because of significant energy efficiency impacts on influences of industrial structure, energy intensity, and technological progress. This research is of great significance to China's energy efficiency and regional coordinated development.

Analysis of a delta spot

NASA Astrophysics Data System (ADS)

Liu, Y.; Zhang, H. Q.

2002-05-01

delta -groups generally develop in three different ways: eruption of a single complex active region, eruption of large satellite spots near a large older spot, or collision of spots of opposite polarity from different dipoles. In this paper, we present a rare observational result in which a delta -spot forms from rapid coalescence of two opposite magnetic features in a pre-existing delta -configuration. The white-light (WL) observations of this delta -spot in active region NOAA 9077 were performed by TRACE. The time-lapse movie of the co-aligned WL images shows that the whole active region was undergoing rapid disintegration and reconstruction on 11-17 July 2000. The preceding ({p}) and following ({f}) components of the delta -spot continue to grow in size, while the active region is in the decaying phase. Their proper motions are determined as a function of time using SOHO/MDI full-disk magnetograms. A major flare (3B/X5.7) erupted in the active region on 14 July. Initially, a relative shearing motion is visible between the {p} and {f} spots on this day. About two hours before the major flare, the shearing motion suddenly stops and the velocities change significantly. The ribbons of the flare are located just outside of the delta -configuration. An interesting finding is the sign reversal of the helicity of the {f} spot also just 2 hours before the flare. The delta -spot obviously separates after the flare. Our results clearly demonstrate that helicity reversal in magnetic features of a delta -configuration is likely to destabilize the compact structure, as well as to re-organize the magnetic field configuration, and, hence, is important for the rapid disintegration of a delta -spot during major flares. A model is presented to explain why a spot can change its chirality.

Rapid Convergence of Energy and Free Energy Profiles with Quantum Mechanical Size in Quantum Mechanical-Molecular Mechanical Simulations of Proton Transfer in DNA.

PubMed

Das, Susanta; Nam, Kwangho; Major, Dan Thomas

2018-03-13

In recent years, a number of quantum mechanical-molecular mechanical (QM/MM) enzyme studies have investigated the dependence of reaction energetics on the size of the QM region using energy and free energy calculations. In this study, we revisit the question of QM region size dependence in QM/MM simulations within the context of energy and free energy calculations using a proton transfer in a DNA base pair as a test case. In the simulations, the QM region was treated with a dispersion-corrected AM1/d-PhoT Hamiltonian, which was developed to accurately describe phosphoryl and proton transfer reactions, in conjunction with an electrostatic embedding scheme using the particle-mesh Ewald summation method. With this rigorous QM/MM potential, we performed rather extensive QM/MM sampling, and found that the free energy reaction profiles converge rapidly with respect to the QM region size within ca. ±1 kcal/mol. This finding suggests that the strategy of QM/MM simulations with reasonably sized and selected QM regions, which has been employed for over four decades, is a valid approach for modeling complex biomolecular systems. We point to possible causes for the sensitivity of the energy and free energy calculations to the size of the QM region, and potential implications.

NASA Helps Build Colorado Economy

NASA Image and Video Library

2010-12-13

Representative from U.S. Senator Udall's office Jimmy Haugue reads remarks from U.S. Senator Udall at the Colorado State Capitol in Denver on Monday, Dec. 13, 2010, prior to the signing of an agreement with NASA that creates a Technology Acceleration Program and Regional Innovation Cluster for Aerospace and Clean Energy. A manufacturing park focused on rapid new product development and production will be developed to assist growing Colorado businesses while promoting the commercialization of technology developed for the space program. Photo Credit: (NASA/Bill Ingalls)

NASA Helps Build Colorado Economy

NASA Image and Video Library

2010-12-13

Colorado Association for Manufacturing and Technology (CAMT) CEO Elaine Thorndike delivers remarks at the Colorado State Capitol in Denver on Monday, Dec. 13, 2010, prior to the signing of an agreement with NASA that creates a Technology Acceleration Program and Regional Innovation Cluster for Aerospace and Clean Energy. A manufacturing park focused on rapid new product development and production will be developed to assist growing Colorado businesses while promoting the commercialization of technology developed for the space program. Photo Credit: (NASA/Bill Ingalls)

NASA Helps Build Colorado Economy

NASA Image and Video Library

2010-12-13

NIST MEP Director Roger Kilmer delivers remarks at the Colorado State Capitol in Denver on Monday, Dec. 13, 2010, prior to the signing of an agreement between the Colorado Association for Manufacturing and Technology (CAMT) and NASA that creates a Technology Acceleration Program and Regional Innovation Cluster for Aerospace and Clean Energy. A manufacturing park focused on rapid new product development and production will be developed to assist growing Colorado businesses while promoting the commercialization of technology developed for the space program. Photo Credit: (NASA/Bill Ingalls)

Rapidities of produced particles in 200-GeV/ c. pi. sup + /p/K sup + interactions on Au, Ag, and Mg

DOE Office of Scientific and Technical Information (OSTI.GOV)

Brick, D.H.; Widgoff, M.; Beilliere, P.

1990-02-01

We have used the Fermilab 30-in. bubble chamber--hybrid spectrometer to study the rapidities of produced particles'' in the interactions of 200-GeV/{ital c} protons and {pi}{sup +} and {ital K}{sup +} mesons with nuclei of gold, silver, and magnesium. The average rapidity decreases linearly with the number of projectile collisions {nu}{sub {ital p}} (up to {nu}{sub {ital p}}=5) with no {ital A} dependence and little beam dependence. The ratio {ital R} of normalized rapidity distributions for hadron-nucleus to hadron-proton interactions shows a plateau in the central region, and becomes much larger in the target region. However, the increase is significantly lessmore » than has been reported in previous experiments. As a function of {nu}{sub {ital p}}, the ratio {ital R} rises linearly in the target region, more gently in the central region, and decreases slowly in the projectile region, in all cases with no {ital A} dependence. Some discrepancies with a previous experiment are observed in the central region. Long-range rapidity correlations are observed in hadron-nucleus events, but not in hadron-proton events. For the former, it is shown that the correlations exist only for those events with multiple projectile collisions, as expected in the multichain dual parton model.« less

Fluid Exchange Across the Seafloor of the Continental Shelf in the South Atlantic Bight

NASA Astrophysics Data System (ADS)

White, S. M.; Wilson, A. M.; Moore, W. S.; Smoak, E. A.; George, C.

2014-12-01

Increasing evidence suggests that saline submarine groundwater discharges from the seafloor in volumes that rival river discharge, but this discharge occurs far from shore, spread regionally across the continental shelves. The very limited observational data suggest that saline discharge occurs via long-term regional flow systems and rapid flushing of porewaters from sandy sediment during storm events. This study aims to overcome the paucity of available observational constraints on characterizing regional-scale fluid exchange on passive margin continental shelves. We are developing a detailed hydrostratigraphic framework based on 200 km of CHIRP seismic lines 5-20 km offshore from Charleston, SC and 13 sediment cores up to 6.5 m long. This survey revealed varying thicknesses (0-15 m) of sediment overlying Cretaceous limestone basement, and a filled paleochannel fluvial system. We have installed 3 sets of nested wells and an additional 10 temperature-gradient arrays to observe a wide variety of environments across the shelf. The wells and thermal arrays have been recently installed in the upper 5 m of the sediment, to allow monitoring of pressure and temperature. The wells will also be sampled for Ra tracers and nutrient concentrations. The combination of wells and survey data will allow us to estimate rates of submarine groundwater discharge via hydraulic gradients and by using heat and geochemical tracers. We have developed a numerical model to invert thermal data to estimate both long-term regional groundwater flow and rapid flushing associated with storm events.

Freeing data through The Polar Information Commons

NASA Astrophysics Data System (ADS)

de Bruin, Taco; Chen, Robert; Parsons, Mark; Carlson, David

2010-05-01

The polar regions are changing rapidly with dramatic global effect. Wise management of resources, improved decision support, and effective international cooperation on resource and geopolitical issues require deeper understanding and better prediction of these changes. Unfortunately, polar data and information remain scattered, scarce, and sporadic. Inspired by the Antarctic Treaty of 1959 that established the Antarctic as a global commons to be used only for peaceful purposes and scientific research, we assert that data and information about the polar regions are themselves "public goods" that should be shared ethically and with minimal constraint. We therefore envision the Polar Information Commons (PIC) as an open, virtual repository for vital scientific data and information that would provide a shared, community-based cyber-infrastructure fostering innovation, improving scientific efficiency, and encouraging participation in polar research, education, planning, and management. The PIC will build on the legacy of the International Polar Year (IPY), providing a long-term framework for access to and preservation of both existing and future data and information about the polar regions. Rapid change demands rapid data access. The PIC system will enable scientists to quickly expose their data to the world and share them through open protocols on the Internet. A PIC digital label will alert users and data centers to new polar data and ensure that usage rights are clear. The PIC will utilize the Science Commons Protocol for Implementing Open Access Data, which promotes open data access through the public domain coupled with community norms of practice to ensure use of data in a fair and equitable manner. A set of PIC norms is currently being developed in consultation with key polar data organizations and other stakeholders. We welcome inputs from the broad science community as we further develop and refine the PIC approach and move ahead with implementation.

Freeing data through The Polar Information Commons

NASA Astrophysics Data System (ADS)

de Bruin, T.; Chen, R. S.; Parsons, M. A.; Carlson, D. J.

2009-12-01

The polar regions are changing rapidly with dramatic global effect. Wise management of resources, improved decision support, and effective international cooperation on resource and geopolitical issues require deeper understanding and better prediction of these changes. Unfortunately, polar data and information remain scattered, scarce, and sporadic. Inspired by the Antarctic Treaty of 1959 that established the Antarctic as a global commons to be used only for peaceful purposes and scientific research, we assert that data and information about the polar regions are themselves “public goods” that should be shared ethically and with minimal constraint. We therefore envision the Polar Information Commons (PIC) as an open, virtual repository for vital scientific data and information that would provide a shared, community-based cyber-infrastructure fostering innovation, improving scientific efficiency, and encouraging participation in polar research, education, planning, and management. The PIC will build on the legacy of the International Polar Year (IPY), providing a long-term framework for access to and preservation of both existing and future data and information about the polar regions. Rapid change demands rapid data access. The PIC system will enable scientists to quickly expose their data to the world and share them through open protocols on the Internet. A PIC digital label will alert users and data centers to new polar data and ensure that usage rights are clear. The PIC will utilize the Science Commons Protocol for Implementing Open Access Data, which promotes open data access through the public domain coupled with community norms of practice to ensure use of data in a fair and equitable manner. A set of PIC norms is currently being developed in consultation with key polar data organizations and other stakeholders. We welcome inputs from the broad science community as we further develop and refine the PIC approach and move ahead with implementation.

Freeing data through The Polar Information Commons

NASA Astrophysics Data System (ADS)

de Bruin, T.; Chen, R. S.; Parsons, M. A.; Carlson, D. J.; Cass, K.; Finney, K.; Wilbanks, J.; Jochum, K.

2010-12-01

The polar regions are changing rapidly with dramatic global effect. Wise management of resources, improved decision support, and effective international cooperation on resource and geopolitical issues require deeper understanding and better prediction of these changes. Unfortunately, polar data and information remain scattered, scarce, and sporadic. Inspired by the Antarctic Treaty of 1959 that established the Antarctic as a global commons to be used only for peaceful purposes and scientific research, we assert that data and information about the polar regions are themselves “public goods” that should be shared ethically and with minimal constraint. ICSU’s Committee on Data (CODATA) therefore started the Polar Information Commons (PIC) as an open, virtual repository for vital scientific data and information. The PIC provides a shared, community-based cyber-infrastructure fostering innovation, improving scientific efficiency, and encouraging participation in polar research, education, planning, and management. The PIC builds on the legacy of the International Polar Year (IPY), providing a long-term framework for access to and preservation of both existing and future data and information about the polar regions. Rapid change demands rapid data access. The PIC system enables scientists to quickly expose their data to the world and share them through open protocols on the Internet. A PIC digital label will alert users and data centers to new polar data and ensure that usage rights are clear. The PIC utilizes the Science Commons Protocol for Implementing Open Access Data, which promotes open data access through the public domain coupled with community norms of practice to ensure use of data in a fair and equitable manner. A set of PIC norms has been developed in consultation with key polar data organizations and other stakeholders. We welcome inputs from the broad science community as we further develop and refine the PIC approach and move ahead with implementation.

Global distribution and evolvement of urbanization and PM2.5 (1998-2015)

NASA Astrophysics Data System (ADS)

Yang, Dongyang; Ye, Chao; Wang, Xiaomin; Lu, Debin; Xu, Jianhua; Yang, Haiqing

2018-06-01

PM2.5 concentrations increased and have been one of the major social issues along with rapid urbanization in many regions of the world in recent decades. The development of urbanization differed among regions, PM2.5 pollution also presented discrepant distribution across the world. Thus, this paper aimed to grasp the profile of global distribution of urbanization and PM2.5 and their evolutionary relationships. Based on global data for the proportion of the urban population and PM2.5 concentrations in 1998-2015, this paper investigated the spatial distribution, temporal variation, and evolutionary relationships of global urbanization and PM2.5. The results showed PM2.5 presented an increasing trend along with urbanization during the study period, but there was a variety of evolutionary relationships in different countries and regions. Most countries in East Asia, Southeast Asia, South Asia, and some African countries developed with the rapid increase in both urbanization and PM2.5. Under the impact of other socioeconomic factors, such as industry and economic growth, the development of urbanization increased PM2.5 concentrations in most Asian countries and some African countries, but decreased PM2.5 concentrations in most European and American countries. The findings of this study revealed the spatial distributions of global urbanization and PM2.5 pollution and provided an interpretation on the evolution of urbanization-PM2.5 relationships, which can contribute to urbanization policies making aimed at successful PM2.5 pollution control and abatement.

Spatio-temporal Variations of Nitrogen Dioxide over Western China from Satellite Observations during 2005-2013

NASA Astrophysics Data System (ADS)

Cui, Y.; Lin, J.; Huang, B.; Song, C.

2015-12-01

Western China has experienced rapid urbanization and industrialization since the implementation of National Western Development Strategy by Chinese Government. Most resource-intensive industries and high-pollution factories had been moved from the east coast to Western China after 2000. In this research, the spatial and temporal variations of tropospheric NO2 concentration in 2005 - 2013 is analyzed based on the satellite observations by Ozone Measurement Instrument (OMI). The annual trends and seasonality of tropospheric NO2 over Western China are calculated. The results show that large increases are observed in urban areas and the polluted regions are expanding. Additionally, the seasonal patterns of some regions over Western China are changing significantly and more clean areas tend to changing from the characteristics of natural emissions to those of anthropogenic emissions. The spatial and temporal variations of NO2 concentrations are well responded to the rapid urbanization and industrialization over Western China.

Food industry and economic development in the Asia Pacific.

PubMed

McKay, John

2007-01-01

The food industry in the Asia Pacific region is gigantic in size, and is therefore a key element in the economic development prospects for the region. It is estimated that in 2000, for example, total expenditure on food and beverages in China was worth $US 188.5 billion, second only to that in Japan at $322 billion. Yet it is clear that given the expansion of both populations and incomes in the region this market will expand rapidly over the next few years. Particularly important will be the continued growth of cities and of the share of employment in industrial and service activities. Much of this growth in food purchases will be supplied from local sources, but this will demand some fundamental changes in domestic food production systems. There will also be a substantial growth in the food trade, with ever increasing levels of national and regional specialisation. These developments will put increasing pressures on quality standards at all levels, with a growing emphasis on food safety, integrity, quality, and nutritional and health impacts. This paper reviews the current status of the food industry and the food trade in the region, and presents some projections for future developments. Particular emphasis is given to policy choices that must be made to ensure that the food system in the region develops in ways that are sustainable and most beneficial to the population as a whole.

[Regional differences and development tendency of livestock manure pollution in China].

PubMed

Qiu, Huan-Guang; Liao, Shao-Pan; Jing, Yue; Luan, Jiang

2013-07-01

The rapid development of livestock production in China has brought livestock manure pollution as a serious environment problem, even threatens China's agriculture sustainable development. On the basis of public statistical data and field research data, this paper analyzed the magnitude of livestock manure excretion and pollution of China and different provinces in 2010, and predicted development tendencies of livestock manure excretion and pollution in 2020 through the Decision Support System for China's Agricultural Sustainable Development (CHINAGRO). The result shows that total livestock manure excretion of China in 2010 is 1 900 million tons, and livestock manure pollution is 227 million tons, while per hectare arable land of livestock manure pollution is 1.86 tons. Provinces in the southeast China, such as Guangdong and Fujian, are areas with high pressure of livestock manure pollution. Model simulation shows that China's total amount of livestock manure pollution will increase to 298 million tons in 2020 without government intervention. The pressure of livestock manure pollution will become higher in most regions of China, especially in east and south regions. The situation in central and western region is better than that in east regions although the pollution pressure will also increase in those areas. Policy intervention such as taxes and subsidies should be adopted to reduce the discharge of livestock manure pollution, and encourage livestock production transfer from eastern areas to the central and western regions.

The rapid bi-level exploration on the evolution of regional solar energy development

NASA Astrophysics Data System (ADS)

Guan, Qing; An, Haizhong; Li, Huajiao; Hao, Xiaoqing

2017-01-01

As one of the renewable energy, solar energy is experiencing increased but exploratory development worldwide. The positive or negative influences of regional characteristics, like economy, production capacity and allowance policies, make them have uneven solar energy development. In this paper, we aim at quickly exploring the features of provincial solar energy development, and their concerns about solar energy. We take China as a typical case, and combine text mining and two-actor networks. We find that the classification of levels based on certain nodes and the amount of degree avoids missing meaningful information that may be ignored by global level results. Moreover, eastern provinces are hot focus for the media, western countries are key to bridge the networks and special administrative region has local development features; third, most focus points are more about the application than the improvement of material. The exploration of news provides practical information to adjust researches and development strategies of solar energy. Moreover, the bi-level exploration, which can also be expanded to multi-level, is helpful for governments or researchers to grasp more targeted and precise knowledge.

Evaluation of massless-spring modeling of suspension-line elasticity during the parachute unfurling process

NASA Technical Reports Server (NTRS)

Poole, L. R.; Huckins, E. K., III

1972-01-01

A general theory on mathematical modeling of elastic parachute suspension lines during the unfurling process was developed. Massless-spring modeling of suspension-line elasticity was evaluated in detail. For this simple model, equations which govern the motion were developed and numerically integrated. The results were compared with flight test data. In most regions, agreement was satisfactory. However, poor agreement was obtained during periods of rapid fluctuations in line tension.

Notification: Audit of Region 6's Emergency and Rapid Response Services Contracts

EPA Pesticide Factsheets

Project #OA-FY13-0046, March 20, 2013. The Office of Inspector General plans to begin the fieldwork phase of our audit of Region 6’s management of the Emergency and Rapid Response Services contracts.

Identification and subspecific differentiation of Mycobacterium scrofulaceum by automated sequencing of a region of the gene (hsp65) encoding a 65-kilodalton heat shock protein.

PubMed Central

Swanson, D S; Pan, X; Musser, J M

1996-01-01

Mycobacterium scrofulaceum is most commonly recovered from children with cervical lymphadenitis, although it also accounts for approximately 2% of the mycobacterial infections in AIDS patients. Species assignment of M. scrofulaceum isolated by conventional techniques can be difficult and time-consuming. To develop a strategy for rapid species assignment of these organisms, a 360-bp region of the gene (hsp65) encoding a 65-kDa heat shock protein in 37 isolates from diverse sources was sequenced. Eight hsp65 alleles were identified, and these sequences formed phylogenetic clusters and lineages largely distinct from other Mycobacterium species. There was incomplete correlation between serovar designation and hsp65 allele assignment. The hsp65 data correlated strongly with the results of sequence analysis of the gene coding for 16S rRNA. Automated DNA sequencing of a 360-bp region of the hsp65 gene provides a rapid and unambiguous method for species assignment of these acid-fast organisms for diagnostic purposes. PMID:8940463

Current status of Crimean-Congo haemorrhagic fever in the World Health Organization Eastern Mediterranean Region: issues, challenges, and future directions.

PubMed

Al-Abri, Seif S; Abaidani, Idris Al; Fazlalipour, Mehdi; Mostafavi, Ehsan; Leblebicioglu, Hakan; Pshenichnaya, Natalia; Memish, Ziad A; Hewson, Roger; Petersen, Eskild; Mala, Peter; Nhu Nguyen, Tran Minh; Rahman Malik, Mamunur; Formenty, Pierre; Jeffries, Rosanna

2017-05-01

Crimean-Congo haemorrhagic fever (CCHF) is the most widespread, tick-borne viral disease affecting humans. The disease is endemic in many regions, such as Africa, Asia, Eastern and Southern Europe, and Central Asia. Recently, the incidence of CCHF has increased rapidly in the countries of the World Health Organization Eastern Mediterranean Region (WHO EMR), with sporadic human cases and outbreaks of CCHF being reported from a number of countries in the region. Despite the rapidly growing incidence of the disease, there are currently no accurate data on the burden of the disease in the region due to the different surveillance systems used for CCHF in these countries. In an effort to increase our understanding of the epidemiology and risk factors for the transmission of the CCHF virus (CCHFV; a Nairovirus of the family Bunyaviridae) in the WHO EMR, and to identify the current knowledge gaps that are hindering effective control interventions, a sub-regional meeting was organized in Muscat, Oman, from December 7 to 9, 2015. This article summarizes the current knowledge of the disease in the region, identifies the knowledge gaps that present challenges for the prevention and control of CCHFV, and details a strategic framework for research and development activities that would be necessary to curb the ongoing and new threats posed by CCHFV. Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

A web-based spatial decision support system for spatial planning and governance in the Guangdong Province

NASA Astrophysics Data System (ADS)

Wu, Qitao; Zhang, Hong-ou; Chen, Fengui; Dou, Jie

2008-10-01

After three decades' rapid economic development, Guangdong province faces to thorny problems related to pollution, resource shortage and environmental deterioration. What is worse, the future accelerated development, urbanization and industrialization also comes at the cost of regional imbalance with economic gaps growing and the quality of life in different regions degrading. Development and Reform Commission of Guangdong Province (GDDRC) started a spatial planning project under the national frame in 2007. The prospective project is expected to enhance the equality of different regions and balance the economic development with environmental protection and improved sustainability. This manuscript presents the results of scientific research aiming to develop a Spatial Decision Support System (SDSS) for this spatial planning project. The system composes four modules include the User interface module (UIM), Spatial Analyze module (SAM), Database management module (DMM) and Help module (HM) base on ArcInfo, JSP/Servlet, JavaScript, MapServer, Visual C++ and Visual Basic technologies. The web-based SDSS provides a user-friendly tool for local decision makers, regional planners and other stakeholders in understanding and visualizing the different territorial dimensions of economic development against sustainable environmental and exhausted resources, and in defining, comparing and prioritizing specific territorially-based actions in order to prevent non-sustainable development and implement relevant politics.

A regional human services authority's rapid needs assessment of evacuees following natural disasters.

PubMed

Post, David E; Kasofsky, Jan M; Hunte, Christopher N; Diaz, James H

2008-01-01

The Atlantic hurricane season of 2005 was not an ordinary season, and Hurricane Katrina was not an ordinary hurricane. Hurricane Katrina damaged more than 93,000 square miles of Gulf of Mexico coastline, displaced more than 1 million residents from New Orleans, and flooded more than 80 percent of New Orleans for weeks, which killed more than 1,300 people, mostly New Orleanians. Inland regional state and local healthcare and human services agencies rushed to assist evacuees, most of whom were uninsured or displaced without employer healthcare coverage. The initial evacuation brought more than 350,000 evacuees seeking shelter to the greater Baton Rouge area, LA, 80 miles north of New Orleans, the closest high ground. This investigation describes the rapid needs assessment developed and conducted by the Capital Area Human Services District of the greater Baton Rouge area, a quasi-governmental human services authority, the regional provider of state-funded mental health, addictive disorders, and developmental disabilities services, on a sample of 6,553 Katrina evacuees in the greater Baton Rouge area. In the event of catastrophic natural and manmade disasters, state and federal decision makers should follow the National Incident Management System and support local designated lead agencies with additional resources as requested. They must rely on designated lead agencies to use their knowledge of the locale, local resources, and relationships with other providers and volunteers to respond rapidly and efficiently to evacuee needs identified through a designated, concise tool that is singularly utilized across the impacted region by all providers to determine the needed response.

Southern forest resource conditions and management practices from 1950-2000: Benefits of research

Treesearch

Jacek P. Siry

2004-01-01

Over the past five decades, research progress and implementation have been the leading factors supporting the rapid development of southern forestry. The South has become the leading timber-supplying region in the United States, taking advantage of a large accumulation of growing stock and a substantial investment in intensive, research-based management treatments....

[Folliculitis barbae in herpes simplex infection].

PubMed

Löhrer, R; Rübben, A

2004-01-01

A 60-year-old male athlete developed a folliculitis in the beard region after several competitions. After identification of herpes simplex antigen within the lesions, systemic therapy with acyclovir led to rapid improvement. In folliculitis resistant to antibiotic and anti-inflammatory therapy, viral and mycotic infections as well as eosinophilic folliculitis should be considered as differential diagnostic possibilities.

Combining Technical Competence and Stakeholder Impact in Environmental Education: The Gambia All Schools Nursery Competition

ERIC Educational Resources Information Center

Paulete, Francisca E.; Orr, Blair

2010-01-01

Under the guidance of the Department of Forestry, the Regional Education Directorate, and Peace Corps/The Gambia, the Gambia All Schools Tree Nursery Competition, an environmental education program, was developed to introduce practical environmental education in The Gambia. Data for this report were collected using a rapid appraisal approach.…

The Internet and Teacher Education: Traversing between the Digitized World and Schools

ERIC Educational Resources Information Center

Chai, Ching Sing; Lim, Cher Ping

2011-01-01

In the face of rapid technological and economic developments globally, pre-service teacher education programs in the Asia-Pacific region are challenged to prepare teachers who are open to new ideas, new practices and information and communication technologies (ICT), to learn how to learn, unlearn and relearn, and to understand and accept the need…

Protecting ecotourism resources in a time of rapid economic and environmental transformation in Asia

Treesearch

Alan Watson; Dave Ostergren; Peter Fix; Bill Overbaugh; Dan McCollum; Linda Kruger; Martha Madsen; He Yang

2009-01-01

In the Far East of Russia, similar to many places in Asia, ecotourism and the environment are in transition. A science team, cooperating with the United Nations Development Programme project "Demonstrating Sustainable Conservation of Biological Diversity in Four Protected Territories in the Kamchatka Region, Russian Federation," is working to provide vital...

Trends in Private Higher Education in Asia

ERIC Educational Resources Information Center

Tilak, Jandhyala B. G.

2009-01-01

There has been rapid growth in private higher education in most countries, including in Asia, during the last two-three decades. This growth, mostly motivated by profit, has had an effect on education and development in general and caused loss of equity--both social and economic, an increase in regional disparities, an erosion in quality, a change…

Developing Capacities for Teaching Responsible Science in the MENA Region: Refashioning Scientific Dialogue

ERIC Educational Resources Information Center

National Academies Press, 2013

2013-01-01

Spurred on by new discoveries and rapid technological advances, the capacity for life science research is expanding across the globe-and with it comes concerns about the unintended impacts of research on the physical and biological environment, human well-being, or the deliberate misuse of knowledge, tools, and techniques to cause harm. This…

Education in Asia: Reviews, Reports, and Notes. Number 9.

ERIC Educational Resources Information Center

United Nations Educational, Scientific, and Cultural Organization, Bangkok (Thailand). Regional Office for Education in Asia and Oceania.

A report on the educational system of Iran along with reviews and reports of recent documents selected from the collection of the Unesco Regional Office for Education in Asia comprise this document. The article on the new Iranian educational system describes changes at the secondary level as a result of rapid socioeconomic development and new…

Homogenization of long instrumental temperature and precipitation series over the Spanish Northern Coast

NASA Astrophysics Data System (ADS)

Sigro, J.; Brunet, M.; Aguilar, E.; Stoll, H.; Jimenez, M.

2009-04-01

The Spanish-funded research project Rapid Climate Changes in the Iberian Peninsula (IP) Based on Proxy Calibration, Long Term Instrumental Series and High Resolution Analyses of Terrestrial and Marine Records (CALIBRE: ref. CGL2006-13327-C04/CLI) has as main objective to analyse climate dynamics during periods of rapid climate change by means of developing high-resolution paleoclimate proxy records from marine and terrestrial (lakes and caves) deposits over the IP and calibrating them with long-term and high-quality instrumental climate time series. Under CALIBRE, the coordinated project Developing and Enhancing a Climate Instrumental Dataset for Calibrating Climate Proxy Data and Analysing Low-Frequency Climate Variability over the Iberian Peninsula (CLICAL: CGL2006-13327-C04-03/CLI) is devoted to the development of homogenised climate records and sub-regional time series which can be confidently used in the calibration of the lacustrine, marine and speleothem time series generated under CALIBRE. Here we present the procedures followed in order to homogenise a dataset of maximum and minimum temperature and precipitation data on a monthly basis over the Spanish northern coast. The dataset is composed of thirty (twenty) precipitation (temperature) long monthly records. The data are quality controlled following the procedures recommended by Aguilar et al. (2003) and tested for homogeneity and adjusted by following the approach adopted by Brunet et al. (2008). Sub-regional time series of precipitation, maximum and minimum temperatures for the period 1853-2007 have been generated by averaging monthly anomalies and then adding back the base-period mean, according to the method of Jones and Hulme (1996). Also, a method to adjust the variance bias present in regional time series associated over time with varying sample size has been applied (Osborn et al., 1997). The results of this homogenisation exercise and the development of the associated sub-regional time series will be widely discussed. Initial comparisons with rapidly growing speleothems in two different caves indicate that speleothem trace element ratios like Ba/Ca are recording the decrease in littoral precipitation in the last several decades. References Aguilar, E., Auer, I., Brunet, M., Peterson, T. C. and Weringa, J. 2003. Guidelines on Climate Metadata and Homogenization, World Meteorological Organization (WMO)-TD no. 1186 / World Climate Data and Monitoring Program (WCDMP) no. 53, Geneva: 51 pp. Brunet M, Saladié O, Jones P, Sigró J, Aguilar E, Moberg A, Lister D, Walther A, Almarza C. 2008. A case-study/guidance on the development of long-term daily adjusted temperature datasets, WMO-TD-1425/WCDMP-66, Geneva: 43 pp. Jones, P D, and Hulme M, 1996, Calculating regional climatic time series for temperature and precipitation: Methods and illustrations, Int. J. Climatol., 16, 361- 377. Osborn, T. J., Briffa K. R., and Jones P. D., 1997, Adjusting variance for sample-size in tree-ring chronologies and other regional mean time series, Dendrochronologia, 15, 89- 99.

Correlation approach to identify coding regions in DNA sequences

NASA Technical Reports Server (NTRS)

Ossadnik, S. M.; Buldyrev, S. V.; Goldberger, A. L.; Havlin, S.; Mantegna, R. N.; Peng, C. K.; Simons, M.; Stanley, H. E.

1994-01-01

Recently, it was observed that noncoding regions of DNA sequences possess long-range power-law correlations, whereas coding regions typically display only short-range correlations. We develop an algorithm based on this finding that enables investigators to perform a statistical analysis on long DNA sequences to locate possible coding regions. The algorithm is particularly successful in predicting the location of lengthy coding regions. For example, for the complete genome of yeast chromosome III (315,344 nucleotides), at least 82% of the predictions correspond to putative coding regions; the algorithm correctly identified all coding regions larger than 3000 nucleotides, 92% of coding regions between 2000 and 3000 nucleotides long, and 79% of coding regions between 1000 and 2000 nucleotides. The predictive ability of this new algorithm supports the claim that there is a fundamental difference in the correlation property between coding and noncoding sequences. This algorithm, which is not species-dependent, can be implemented with other techniques for rapidly and accurately locating relatively long coding regions in genomic sequences.

The hidden cost of moving up: type 2 diabetes and the escape from persistent poverty in the American South.

PubMed

Steckel, Richard H

2013-01-01

The paper tests the thrifty phenotype hypothesis, according to which nonharmonious growth trajectories are costly for adult health. The American surge in the prevalence of type 2 diabetes is concentrated in the South, a region characterized by a long history of poverty followed by rapid economic growth beginning in the 1960s. Civil rights legislation further accelerated income growth for African-Americans in the region. The paper investigates the hypothesis by using per capita income at the state level as a proxy for net nutritional conditions. Regressions at the state level explain 56% of the variation in the prevalence rate of type 2 diabetes in 2009 using two explanatory variables: the ratio of per capita income in 1980 to that in 1950 and the share of the population that was African-American. The paper discusses ways that rapid economic growth may have translated into weight gain and type 2 diabetes. If the thrifty phenotype hypothesis is correct, future rates in the prevalence of type 2 diabetes are predictable based on income history. The forecast for rapidly developing countries such as India and China are ominous. Copyright © 2013 Wiley Periodicals, Inc.

What Lies Beneath? An Evaluation of Rapid Assessment Tools for Management of Hull Fouling

NASA Astrophysics Data System (ADS)

Clarke Murray, Cathryn; Therriault, Thomas W.; Pakhomov, Evgeny

2013-08-01

Despite an increased understanding of marine invasions, non-indigenous species (NIS) continue to be redistributed at both global and regional scales. Since prevention is an important element of NIS programs, monitoring vectors responsible for NIS introductions and spread, such as hull fouling, has become a priority and methods should be selected carefully to balance accuracy, time, and cost. Two common fouling assessment tools for the marine recreational boating vector were evaluated for accuracy using a traditional underwater SCUBA survey in coastal British Columbia: a dockside level of fouling assessment and a behavioral questionnaire model. Results showed that although rapid, dockside assessments did not provide an accurate assessment of fouling present below the surface, at least not in this region. In contrast, a questionnaire-based model using four easily obtained variables (boat type, age of antifouling paint, storage type, and occurrence of long distance trips) reliably identified boats carrying macrofouling species, a proxy for risk of NIS transport. Once validated, this fouling model tool could be applied in border inspection or quarantine situations where decisions must be made quickly. Further development and refinement of rapid assessment tools would improve our ability to prevent new introductions and manage spread of existing invasive species.

What lies beneath? An evaluation of rapid assessment tools for management of hull fouling.

PubMed

Clarke Murray, Cathryn; Therriault, Thomas W; Pakhomov, Evgeny

2013-08-01

Despite an increased understanding of marine invasions, non-indigenous species (NIS) continue to be redistributed at both global and regional scales. Since prevention is an important element of NIS programs, monitoring vectors responsible for NIS introductions and spread, such as hull fouling, has become a priority and methods should be selected carefully to balance accuracy, time, and cost. Two common fouling assessment tools for the marine recreational boating vector were evaluated for accuracy using a traditional underwater SCUBA survey in coastal British Columbia: a dockside level of fouling assessment and a behavioral questionnaire model. Results showed that although rapid, dockside assessments did not provide an accurate assessment of fouling present below the surface, at least not in this region. In contrast, a questionnaire-based model using four easily obtained variables (boat type, age of antifouling paint, storage type, and occurrence of long distance trips) reliably identified boats carrying macrofouling species, a proxy for risk of NIS transport. Once validated, this fouling model tool could be applied in border inspection or quarantine situations where decisions must be made quickly. Further development and refinement of rapid assessment tools would improve our ability to prevent new introductions and manage spread of existing invasive species.

Identifying metastatic breast tumors using textural kinetic features of a contrast based habitat in DCE-MRI

NASA Astrophysics Data System (ADS)

Chaudhury, Baishali; Zhou, Mu; Goldgof, Dmitry B.; Hall, Lawrence O.; Gatenby, Robert A.; Gillies, Robert J.; Drukteinis, Jennifer S.

2015-03-01

The ability to identify aggressive tumors from indolent tumors using quantitative analysis on dynamic contrast enhanced magnetic resonance imaging (DCE-MRI) would dramatically change the breast cancer treatment paradigm. With this prognostic information, patients with aggressive tumors that have the ability to spread to distant sites outside of the breast could be selected for more aggressive treatment and surveillance regimens. Conversely, patients with tumors that do not have the propensity to metastasize could be treated less aggressively, avoiding some of the morbidity associated with surgery, radiation and chemotherapy. We propose a computer aided detection framework to determine which breast cancers will metastasize to the loco-regional lymph nodes as well as which tumors will eventually go on to develop distant metastses using quantitative image analysis and radiomics. We defined a new contrast based tumor habitat and analyzed textural kinetic features from this habitat for classification purposes. The proposed tumor habitat, which we call combined-habitat, is derived from the intersection of two individual tumor sub-regions: one that exhibits rapid initial contrast uptake and the other that exhibits rapid delayed contrast washout. Hence the combined-habitat represents the tumor sub-region within which the pixels undergo both rapid initial uptake and rapid delayed washout. We analyzed a dataset of twenty-seven representative two dimensional (2D) images from volumetric DCE-MRI of breast tumors, for classification of tumors with no lymph nodes from tumors with positive number of axillary lymph nodes. For this classification an accuracy of 88.9% was achieved. Twenty of the twenty-seven patients were analyzed for classification of distant metastatic tumors from indolent cancers (tumors with no lymph nodes), for which the accuracy was 84.3%.

Saudi Arabia.

PubMed

1989-07-01

The country of Saudi Arabia contains 830,000 square miles, mostly desert with mountains in the southwest. It has population of 11 million and an annual growth rate of 3.5%. The population is 90% Arab and the rest Afro-Asian; the religion is Islam, and the language is Arabic. There is an 80% literacy rate, an infant mortality rate of 78/1000, and life expectancy of 60 years. There is a 4.8 million person work force, of which 25% is Saudi and 75% foreign. Until recently most of the people were nomadic and seminomadic; but with rapid economic growth, urbanization has progressed quickly and 90% are now settled, with some cities having high population densities (2,000/square mile). The country is very conservative due to the adherence to strict Islamic law. Oil was discovered in 1903 but large production was not introduced until after World War II. The country is now the world's largest oil exporter and 50% of the governments funds come from it. The country has developed rapidly in the 1970's and 1980's and present plans are for consolidation of the country's defenses, more government efficiency. Greater private sector employment is sought for Saudis, with reduction of foreign workers and more regional development The US and Saudis have mutual interest is stability in the region and have worked closely for peaceful development.

[The interplay of diagnostic and antimicrobial stewardship for the management of septic patients: the Tuscan model.

PubMed

Forni, Silvia; Toccafondi, Giulio; Viaggi, Bruno; Grazzini, Maddalena; D'Arienzo, Sara; Gemmi, Fabrizio; Vannucci, Andrea; Tulli, Giorgio

2018-02-01

Antimicrobial resistance is a global threat caused by the rapid spread of multiresistant microorganisms. Antimicrobial stewardship (AS) is a coordinated intervention designed to improve the appropriate use of antimicrobials by promoting the selection of the optimal drug regimen, dose, duration of therapy and route of administration. AS programs have proved effective in reducing antimicrobial resistance, inappropriate antimicrobial use and in improving patient outcomes. Recently developed rapid diagnostic technologies in microbiology (RDTM) allows a faster and etiological diagnosis of infection and a reduction in the use of unnecessary empirical therapies. This may result in important advancement in time-critical care pathways for septic patients. Nevertheless, RDTM are costly and if not rationally positioned may consume resources and hinder the efficacy of AS programs. In this regard, Tuscany Region is engaged in designing, through a systemic approach, an effective high-quality clinical microbiological service grid. In order to develop a sustainable and equitable model for integrating diagnostic and antimicrobial stewardship we conducted a survey in the regional network of 14 microbiological laboratories. The results shows that in order to develop a sustainable service we need to improve the communication at the interface between laboratories and care unit, harmonize the time windows for processing samples and to devise a robust score for stratifying patient with suspected sepsis.

Cancer surveillance in northern Africa, and central and western Asia: challenges and strategies in support of developing cancer registries.

PubMed

Znaor, Ariana; Eser, Sultan; Anton-Culver, Hoda; Fadhil, Ibtihal; Ryzhov, Anton; Silverman, Barbara G; Bendahou, Karima; Demetriou, Anna; Nimri, Omar; Yakut, Cankut; Bray, Freddie

2018-02-01

The Global Initiative for Cancer Registry Development partnership, led by the International Agency for Research on Cancer (IARC), was established in response to an overwhelming need for high-quality cancer incidence data from low-income and middle-income countries. The IARC Regional Hub for cancer registration in North Africa, Central and West Asia was founded in 2013 to support capacity building for cancer registration in each of the countries in this region. In this Series paper, we advocate the necessity for tailored approaches to cancer registration given the rapidly changing cancer landscape for this region, and the challenges faced at a national level in developing data systems to help support this process given present disparities in resources and health infrastructure. In addition, we provide an overview of the status of cancer surveillance and activities country-by-country, documenting tailored approaches that are informing local cancer-control policy, and potentially curbing the growing cancer burden across the region. Copyright © 2018 Elsevier Ltd. All rights reserved.

Convective scale interaction: Arc cloud lines and the development and evolution of deep convection

NASA Technical Reports Server (NTRS)

Purdom, James Francis Whitehurst

1986-01-01

Information is used from satellite data and research aircraft data to provide new insights concerning the mesoscale development and evolution of deep convection in an atmosphere typified by weak synoptic-scale forcing. The importance of convective scale interaction in the development and evolution of deep convection is examined. This interaction is shown to manifest itself as the merger and intersection of thunderstorm outflow boundaries (arc cloud lines) with other convective lines, areas or boundaries. Using geostationary satellite visible and infrared data convective scale interaction is shown to be responsible for over 85 percent of the intense convection over the southeast U.S. by late afternoon, and a majority of that area's afternoon rainfall. The aircraft observations provided valuable information concerning critically important regions of the arc cloud line: (1) the cool outflow region, (2) the density surge line interface region; and (3) the sub-cloud region above the surge line. The observations when analyzed with rapid scan satellite data, helped in defining the arc cloud line's life cycle as 3 evolving stages.

Evaluation of HART MetroRapid BRT.

DOT National Transportation Integrated Search

2015-08-01

This report is a limited scope evaluation of the MetroRapids first two years of operation. The : MetroRapid represents Hillsborough Area Regional Transits first foray into bus rapid transit. Built at a : total cost of $34.75 million, or $1.98 m...

[Eco-economic thinking for developing carbon sink industry in the de-farming regions].

PubMed

Wang, Ji Jun; Wang, Zheng Shu; Cheng, Si Min; Gu, Wen; Li, Yue; Li, Mao Sen

2017-12-01

Based on the potential and the law that plants absorb carbon dioxide, carbon sink industry means certain appropriate artificial intervention to obtain clean air, and to meet people's production and life demand for ecological environment industry. Carbon sink industry is considered as a breakthrough point and a new growth point for optimizing and upgrading of the original relatively balanced or stable agricultural industry-resources system. Among the ecosystem services in the de-farming regions, the rapid increase of the economic manifestation of carbon fixation and oxygen release function and the carbon sink potential, as well as the rise of carbon trading and carbon market both in domestic and international, have established a theoretical and practical basis for the deve-lopment of carbon industry. With the development of the carbon sink industry, improving the carbon sequestration output will become the core of the carbon sink industry. The producers or marketers will form the controlling of the carbon source, the development of the path for carbon storage increasing and re-layout of agricultural industry-resources structure, and thus bring new vitality to regional sustainable development in the de-farming regions. This indicates the emphasis for the future research and development, that is, allocating the agricultural industry-resources structure and their benign coupling mechanism after integrating the carbon sink industry.

Towards a comparative analysis of health systems reforms in the Asia-Pacific Region.

PubMed

Phua, Kai Hong; Chew, Amelia Huibin

2002-01-01

The paper will review a representative selection of health systems reforms throughout the Asia-Pacific region to summarise the regional experience, identify the key lessons learnt from innovative health reforms and propose policy recommendations for sustainable health systems development. Broad descriptive trends of health systems reforms will be compared across the Asia-Pacific region within the context of rapid demographic, health and socio-economic development. More specifically, the study will address the following questions: 1. What are the main features of innovative health systems reforms? 2. How have these reforms affected the health systems? 3. Are there lessons and other implications from these reforms? A common conceptual framework to compare health systems reforms is adopted, using a standardised format to report data of national health systems. A classification of health systems is constructed by categorising them according to the level of development of their respective economies: 1) Developed 2 )High Performing 3) Newly Industrialising 4) Transitional, and 5) Developing. A typology of common issues, challenges and responses are generalised for these health systems at different stages of socio-economic development of individual countries. Evaluative criteria are proposed to compare the long-term effects of these reforms on national health systems in terms of efficiency, equity, quality and sustainability.

The inhabited environment, infrastructure development and advanced urbanization in China’s Yangtze River Delta Region

NASA Astrophysics Data System (ADS)

Zhu, Xiaoqing; Gao, Weijun; Zhou, Nan; Kammen, Daniel M.; Wu, Yiqun; Zhang, Yao; Chen, Wei

2016-12-01

This paper analyzes the relationship among the inhabited environment, infrastructure development and environmental impacts in China’s heavily urbanized Yangtze River Delta region. Using primary human environment data for the period 2006-2014, we examine factors affecting the inhabited environment and infrastructure development: urban population, GDP, built-up area, energy consumption, waste emission, transportation, real estate and urban greenery. Then we empirically investigate the impact of advanced urbanization with consideration of cities’ differences. Results from this study show that the growth rate of the inhabited environment and infrastructure development is strongly influenced by regional development structure, functional orientations, traffic network and urban size and form. The effect of advanced urbanization is more significant in large and mid-size cities than huge and mega cities. Energy consumption, waste emission and real estate in large and mid-size cities developed at an unprecedented rate with the rapid increase of economy. However, urban development of huge and mega cities gradually tended to be saturated. The transition development in these cities improved the inhabited environment and ecological protection instead of the urban construction simply. To maintain a sustainable advanced urbanization process, policy implications included urban sprawl control polices, ecological development mechanisms and reforming the economic structure for huge and mega cities, and construct major cross-regional infrastructure, enhance the carrying capacity and improvement of energy efficiency and structure for large and mid-size cities.

The change in capacity and service delivery at public and private hospitals in Turkey: a closer look at regional differences.

PubMed

Aksan, Hediye A D; Ergin, Işıl; Ocek, Zeliha

2010-11-01

Substantial regional health inequalities have been shown to exist in Turkey for major health indicators. Turkish data on hospitals deserves a closer examination with a special emphasis on the regional differences in the context of the rapid privatization of the secondary or tertiary level health services.This study aims to evaluate the change in capacity and service delivery at public and private hospitals in Turkey between 2001-2006 and to determine the regional differences. Data for this retrospective study was provided from Statistical Almanacs of Inpatient Services (2001-2006). Hospitals in each of the 81 provinces were grouped into two categories: public and private. Provinces were grouped into six regions according to a development index composed by the State Planning Organisation. The number of facilities, hospital beds, outpatient admissions, inpatient admissions (per 100 000), number of deliveries and surgical operations (per 10 000) were calculated for public and private hospitals in each province and region. Regional comparisons were based on calculation of ratios for Region 1(R1) to Region 6(R6). Public facilities had a fundamental role in service delivery. However, private sector grew rapidly in Turkey between 2001-2006 in capacity and service delivery. In public sector, there were 2.3 fold increase in the number of beds in R1 to R6 in 2001. This ratio was 69.9 fold for private sector. The substantial regional inequalities in public and private sector decreased for the private sector enormously while a little decrease was observed for the public sector. In 2001 in R1, big surgical operations were performed six times more than R6 at the public sector whereas the difference was 117.7 fold for the same operations in the same regions for the private sector. These ratios decreased to 3.6 for the public sector and 13.9 for the private sector in 2006. The private health sector has grown enormously between 2001-2006 in Turkey including the less developed regions of the country. Given the fact that majority of people living in these underdeveloped regions are uninsured, the expansion of the private sector may not contribute in reducing the inequalities in access to health care. In fact, it may widen the existing gap for access to health between high and low income earners in these underdeveloped regions.

Assessment of Regional Ecosystem Health—A Case Study of the Golden Triangle of Southern Fujian Province, China

PubMed Central

Wang, Ziyan; Qiu, Quanyi; Wu, Tong; Shao, Guofan

2018-01-01

Intensifying urbanization and rapid population growth in Fujian Province, China, has caused pollution of air and water resources; this has adversely impacted ecosystems and human health. China has recently begun pursuing a massive infrastructure and economic development strategy called the Belt and Road Initiative, which could potentially cause further environmental damage. Evaluations of ecosystem health are therefore a first step towards identifying the potential impacts from the development and planning sustainable development strategies in the Golden Triangle of Southern Fujian. To this end, our study analyzed landscape patterns and evaluated ecosystem health in this region. We used an index system method to develop a pressure–state–response (PSR) model for assessing the region’s ecosystem health. We found that: (1) the landscape type with the greatest area in the study region is cultivated land and there were no areas that were undisturbed by human activity; (2) the overall ecological health of the region is good, but there is distinct variation across the region. This study incorporates the landscape pattern into an evaluation of ecosystem health. Using counties as evaluation units, we provide a general evaluation index for this scale. The methods reported here can be used in complex ecological environments to inform sustainable management decisions. PMID:29671817

Application of Pyrosequencing® in Food Biodefense.

PubMed

Amoako, Kingsley Kwaku

2015-01-01

The perpetration of a bioterrorism attack poses a significant risk for public health with potential socioeconomic consequences. It is imperative that we possess reliable assays for the rapid and accurate identification of biothreat agents to make rapid risk-informed decisions on emergency response. The development of advanced methodologies for the detection of biothreat agents has been evolving rapidly since the release of the anthrax spores in the mail in 2001, and recent advances in detection and identification techniques could prove to be an essential component in the defense against biological attacks. Sequence-based approaches such as Pyrosequencing(®), which has the capability to determine short DNA stretches in real time using biotinylated PCR amplicons, have potential biodefense applications. Using markers from the virulence plasmids and chromosomal regions, my laboratory has demonstrated the power of this technology in the rapid, specific, and sensitive detection of B. anthracis spores and Yersinia pestis in food. These are the first applications for the detection of the two organisms in food. Furthermore, my lab has developed a rapid assay to characterize the antimicrobial resistance (AMR) gene profiles for Y. pestis using Pyrosequencing. Pyrosequencing is completed in about 60 min (following PCR amplification) and yields accurate and reliable results with an added layer of confidence, thus enabling rapid risk-informed decisions to be made. A typical run yields 40-84 bp reads with 94-100 % identity to the expected sequence. It also provides a rapid method for determining the AMR profile as compared to the conventional plate method which takes several days. The method described is proposed as a novel detection system for potential application in food biodefense.

Rapid assessment of infrastructure of primary health care facilities - a relevant instrument for health care systems management.

PubMed

Scholz, Stefan; Ngoli, Baltazar; Flessa, Steffen

2015-05-01

Health care infrastructure constitutes a major component of the structural quality of a health system. Infrastructural deficiencies of health services are reported in literature and research. A number of instruments exist for the assessment of infrastructure. However, no easy-to-use instruments to assess health facility infrastructure in developing countries are available. Present tools are not applicable for a rapid assessment by health facility staff. Therefore, health information systems lack data on facility infrastructure. A rapid assessment tool for the infrastructure of primary health care facilities was developed by the authors and pilot-tested in Tanzania. The tool measures the quality of all infrastructural components comprehensively and with high standardization. Ratings use a 2-1-0 scheme which is frequently used in Tanzanian health care services. Infrastructural indicators and indices are obtained from the assessment and serve for reporting and tracing of interventions. The tool was pilot-tested in Tanga Region (Tanzania). The pilot test covered seven primary care facilities in the range between dispensary and district hospital. The assessment encompassed the facilities as entities as well as 42 facility buildings and 80 pieces of technical medical equipment. A full assessment of facility infrastructure was undertaken by health care professionals while the rapid assessment was performed by facility staff. Serious infrastructural deficiencies were revealed. The rapid assessment tool proved a reliable instrument of routine data collection by health facility staff. The authors recommend integrating the rapid assessment tool in the health information systems of developing countries. Health authorities in a decentralized health system are thus enabled to detect infrastructural deficiencies and trace the effects of interventions. The tool can lay the data foundation for district facility infrastructure management.

Lead contamination in sediments in the past 20 years: A challenge for China.

PubMed

Han, Lanfang; Gao, Bo; Hao, Hong; Zhou, Huaidong; Lu, Jin; Sun, Ke

2018-06-04

Lead (Pb) contamination was recognized in China early in the 1920s. However, the response of Pb contamination in sediments to China's rapid economic and social development remains uncertain to date. We conducted a literature review of over 1000 articles from 1990 to 2016 and the first national-scale survey of Pb contamination in China. A literature review showed that available research in China focused on the economically highly developed river basins, including the Pearl River Basin (PRB), Yellow River Basin (YRB), and Yangtze River Basin (YtRB), whereas those in the less developed southeastern, southwestern, and northwestern river basins received limited attention. The YtRB and YRB had higher Pb contamination levels than other basins, corresponding with the rapid economic development in those regions. However, the less economically developed river basins in the southeastern and northwestern regions of China were also contaminated by Pb. Analysis of 146 studies in the PRB, YRB, and YtRB revealed that Pb contamination in PRB sediments showed a tendency to improve over time, whereas that from the YtRB exhibited a tendency to worsen. For the YRB, there was a slight increase from 1990 to 2006 and a decreasing trend from 2007 to 2014. The overall temporal trend in Pb levels in PRB and YRB sediments corresponded with that of the Pb discharged in wastewater in the surrounding cities, indicating that industrial wastewater discharge was possibly one of the main anthropogenic sources of Pb in those sediments. For the YtRB, the increasing trend in Pb concentrations was related to the considerably high atmospheric Pb emissions in the surrounding cities and its geographical characteristics. These findings suggested that China should develop systematic and consistent approaches for monitoring Pb contents in sediments and adopt a regional economic development policy focusing on pollution prevention. Copyright © 2018 Elsevier B.V. All rights reserved.

Development of an International Research Project of Monsoon Asia Integrated Regional Study (MAIRS)

NASA Astrophysics Data System (ADS)

Fu, C.

2006-05-01

Monson Asia has been recommended as one of the critical regions of integrated study of global change. Among a number of reasons, the most significant features of Monsoon Asia is that this is a region where the major features of landscape, such as vegetation, soil and water system are mainly developed under the most representative monsoon climate. On the other hand, the Monsoon Asia is a region with the most active human development. It has more than 5000 years long history of civilization and highest population density of the world, reaching 57 percent of word population. It also had the most rapid development in last decades and is projected to maintain its high growth rates in the foreseeable future. The human-monsoon system interactions and their linkages with the earth system dynamics could be a challenge issue of global change research and a sustainable Asia . A science plan of MAIRS is under drafting by SSC of MAIRS under the guidance of START and an international project office of MAIRS was formally opened in IAP/Chinese Academy of Sciences under the support of Chinese government. The overall objectives of the MAIRS that will combine field experiments, process studies, and modeling components are: 1) To better understand how human activities in regions are interacting with and altering natural regional variability of the atmospheric, terrestrial, and marine components of the environment; 2) To contribute to the provision of a sound scientific basis for sustainable regional development; 3) To develop a predictive capability of estimating changes in global-regional linkages in the Earth System and to recognize on a sound scientific basis the future consequences of such changes.

Rapid profiling of Swiss cheese by attenuated total reflectance (ATR) infrared spectroscopy and descriptive sensory analysis.

PubMed

Kocaoglu-Vurma, N A; Eliardi, A; Drake, M A; Rodriguez-Saona, L E; Harper, W J

2009-08-01

The acceptability of cheese depends largely on the flavor formed during ripening. The flavor profiles of cheeses are complex and region- or manufacturer-specific which have made it challenging to understand the chemistry of flavor development and its correlation with sensory properties. Infrared spectroscopy is an attractive technology for the rapid, sensitive, and high-throughput analysis of foods, providing information related to its composition and conformation of food components from the spectra. Our objectives were to establish infrared spectral profiles to discriminate Swiss cheeses produced by different manufacturers in the United States and to develop predictive models for determination of sensory attributes based on infrared spectra. Fifteen samples from 3 Swiss cheese manufacturers were received and analyzed using attenuated total reflectance infrared spectroscopy (ATR-IR). The spectra were analyzed using soft independent modeling of class analogy (SIMCA) to build a classification model. The cheeses were profiled by a trained sensory panel using descriptive sensory analysis. The relationship between the descriptive sensory scores and ATR-IR spectra was assessed using partial least square regression (PLSR) analysis. SIMCA discriminated the Swiss cheeses based on manufacturer and production region. PLSR analysis generated prediction models with correlation coefficients of validation (rVal) between 0.69 and 0.96 with standard error of cross-validation (SECV) ranging from 0.04 to 0.29. Implementation of rapid infrared analysis by the Swiss cheese industry would help to streamline quality assurance.

Global sulfur emissions from 1850 to 2000.

PubMed

Stern, David I

2005-01-01

The ASL database provides continuous time-series of sulfur emissions for most countries in the World from 1850 to 1990, but academic and official estimates for the 1990s either do not cover all years or countries. This paper develops continuous time series of sulfur emissions by country for the period 1850-2000 with a particular focus on developments in the 1990s. Global estimates for 1996-2000 are the first that are based on actual observed data. Raw estimates are obtained in two ways. For countries and years with existing published data I compile and integrate that data. Previously published data covers the majority of emissions and almost all countries have published emissions for at least 1995. For the remaining countries and for missing years for countries with some published data, I interpolate or extrapolate estimates using either an econometric emissions frontier model, an environmental Kuznets curve model, or a simple extrapolation, depending on the availability of data. Finally, I discuss the main movements in global and regional emissions in the 1990s and earlier decades and compare the results to other studies. Global emissions peaked in 1989 and declined rapidly thereafter. The locus of emissions shifted towards East and South Asia, but even this region peaked in 1996. My estimates for the 1990s show a much more rapid decline than other global studies, reflecting the view that technological progress in reducing sulfur based pollution has been rapid and is beginning to diffuse worldwide.

Same-Day Imaging Using Small Proteins: Clinical Experience and Translational Prospects in Oncology.

PubMed

Krasniqi, Ahmet; D'Huyvetter, Matthias; Devoogdt, Nick; Frejd, Fredrik Y; Sörensen, Jens; Orlova, Anna; Keyaerts, Marleen; Tolmachev, Vladimir

2018-06-01

Imaging of expression of therapeutic targets may enable stratification of patients for targeted treatments. The use of small radiolabeled probes based on the heavy-chain variable region of heavy-chain-only immunoglobulins or nonimmunoglobulin scaffolds permits rapid localization of radiotracers in tumors and rapid clearance from normal tissues. This makes high-contrast imaging possible on the day of injection. This mini review focuses on small proteins for radionuclide-based imaging that would allow same-day imaging, with the emphasis on clinical applications and promising preclinical developments within the field of oncology. © 2018 by the Society of Nuclear Medicine and Molecular Imaging.

Chronic Lymphocytic Leukemia as an Unusual Cause of Rapid Airway Compromise

PubMed Central

Ezzell, Erin E.; Renshaw, John S.

2017-01-01

Chronic Lymphocytic Leukemia (CLL) is the most prevalent form of non-Hodgkin's lymphoma (NHL) in Western countries predominantly affecting adults over the age of 65. CLL is commonly indolent in nature but can present locally and aggressively at extranodal sites. Although CLL may commonly present with cervical lymphadenopathy, manifestation in nonlymphoid regions of the head and neck is not well described. CLL causing upper airway obstruction is even more uncommon. We describe a case of a patient with known history of CLL and stable lymphocytosis that developed an enlarging lymphoid base of tongue (BOT) mass resulting in rapid airway compromise. PMID:28396813

The Heritage of Radiotracers for PET

DOE R&D Accomplishments Database

Fowler, J. S.; Wolf, A. P.

1988-05-01

The history of PET research clearly demonstrates that it is advances in chemistry coupled with a detailed examination of the biochemistry of new radiotracers which has allowed the PET method to be applied to new areas of biology and medicine. Radiotracers whose regional distribution reflects glucose metabolism, neutrotransmitter activity and enzyme activity have all required the development of rapid synthetic methods for the radiotracers themselves and the characterization of their biochemical behavior. This article traces some of the advances in the production of labeled precursors and in radiotracer synthesis and evaluation which have shaped the rapidly expanding application of PET to problems in the neurosciences, in cardiology and in oncology.

Chlorine residuals and haloacetic acid reduction in rapid sand filtration.

PubMed

Chuang, Yi-Hsueh; Wang, Gen-Shuch; Tung, Hsin-hsin

2011-11-01

It is quite rare to find biodegradation in rapid sand filtration for drinking water treatment. This might be due to frequent backwashes and low substrate levels. High chlorine concentrations may inhibit biofilm development, especially for plants with pre-chlorination. However, in tropical or subtropical regions, bioactivity on the sand surface may be quite significant due to high biofilm development--a result of year-round high temperature. The objective of this study is to explore the correlation between biodegradation and chlorine concentration in rapid sand filters, especially for the water treatment plants that practise pre-chlorination. In this study, haloacetic acid (HAA) biodegradation was found in conventional rapid sand filters practising pre-chlorination. Laboratory column studies and field investigations were conducted to explore the association between the biodegradation of HAAs and chlorine concentrations. The results showed that chlorine residual was an important factor that alters bioactivity development. A model based on filter influent and effluent chlorine was developed for determining threshold chlorine for biodegradation. From the model, a temperature independent chlorine concentration threshold (Cl(threshold)) for biodegradation was estimated at 0.46-0.5mgL(-1). The results imply that conventional filters with adequate control could be conducive to bioactivity, resulting in lower HAA concentrations. Optimizing biodegradable disinfection by-product removal in conventional rapid sand filter could be achieved with minor variation and a lower-than-Cl(threshold) influent chlorine concentration. Bacteria isolation was also carried out, successfully identifying several HAA degraders. These degraders are very commonly seen in drinking water systems and can be speculated as the main contributor of HAA loss. Copyright © 2011 Elsevier Ltd. All rights reserved.

Applications of Rapid Evaluation of Metapopulation Persistence (REMP) in Conservation Planning for Vulnerable Fauna Species.

PubMed

Taylor, Subhashni; Drielsma, Michael; Taylor, Robert; Kumar, Lalit

2016-06-01

In many regions species are declining due to fragmentation and loss of habitat. If species persistence is to be achieved, ecologically informed, effective conservation action is required. Yet it remains a challenge to identify optimal places in a landscape to direct habitat reconstruction and management. Rather than relying on individual landscape metrics, process-based regional scale assessment methodology is needed that focuses primarily on species persistence. This means integrating, according to species' ecology, habitat extent, suitability, quality and spatial configuration. The rapid evaluation of metapopulation persistence (REMP) methodology has been developed for this purpose. However, till now no practical conservation planning application of REMP has been described. By integration of expert ecological knowledge, we extended REMP's capabilities to prioritize conservation action for a highly modified agricultural region of central NSW, Australia based on the metapopulation ecology of 34 fauna species. The region's current capacity to support the species was evaluated in relation to the pre-European state for which there was known viability. Six of the species were found to currently have insufficient habitat to support viable populations. Seeking locations to maximize overall improvement in viability for these species, we prioritized conservation action to locations near the threshold of metapopulation persistence.

Declining agricultural production in rapidly urbanizing semi-arid regions: policy tradeoffs and sustainability indicators

NASA Astrophysics Data System (ADS)

Dozier, André Q.; Arabi, Mazdak; Wostoupal, Benjamin C.; Goemans, Christopher G.; Zhang, Yao; Paustian, Keith

2017-08-01

In rapidly urbanizing semi-arid regions, increasing amounts of historically irrigated cropland lies permanently fallowed due to water court policies as agricultural water rights are voluntarily being sold to growing cities. This study develops an integrative framework for assessing the effects of population growth and land use change on agricultural production and evaluating viability of alternative management strategies, including alternative agricultural transfer methods, regional water ownership restrictions, and urban conservation. A partial equilibrium model of a spatially-diverse regional water rights market is built in application of the framework to an exemplary basin. The model represents agricultural producers as profit-maximizing suppliers and municipalities as cost-minimizing consumers of water rights. Results indicate that selling an agricultural water right today is worth up to two times more than 40 years of continued production. All alternative policies that sustain agricultural cropland and crop production decrease total agricultural profitability by diminishing water rights sales revenue, but in doing so, they also decrease municipal water acquisition costs. Defining good indicators and incorporating adequate spatial and temporal detail are critical to properly analyzing policy impacts. To best improve agricultural profit from production and sale of crops, short-term solutions include alternative agricultural transfer methods while long-term solutions incorporate urban conservation.

Enhancing Earth Observation Capacity in the Himalayan Region

NASA Astrophysics Data System (ADS)

Shrestha, B. R.

2012-12-01

Earth observations bear special significance in the Himalayan Region owing to the fact that routine data collections are often hampered by highly inaccessible terrain and harsh climatic conditions. The ongoing rapid environmental changes have further emphasized its relevance and use for informed decision-making. The International Center for Integrated Mountain Development (ICIMOD), with a regional mandate is promoting the use of earth observations in line with the GEOSS societal benefit areas. ICIMOD has a proven track record to utilize earth observations notably in the areas of understanding glaciers and snow dynamics, disaster risk preparedness and emergency response, carbon estimation for community forestry user groups, land cover change assessment, agriculture monitoring and food security analysis among others. This paper presents the challenges and lessons learned as a part of capacity building of ICIMOD to utilize earth observations with the primary objectives to empower its member countries and foster regional cooperation. As a part of capacity building, ICIMOD continues to make its efforts to augment as a regional resource center on earth observation and geospatial applications for sustainable mountain development. Capacity building possesses multitude of challenges in the region: the complex geo-political reality with differentiated capacities of member states, poorer institutional and technical infrastructure; addressing the needs for multiple user and target groups; integration with different thematic disciplines; and high resources intensity and sustainability. A capacity building framework was developed based on detailed needs assessment with a regional approach and strategy to enhance capability of ICIMOD and its network of national partners. A specialized one-week training course and curriculum have been designed for different thematic areas to impart knowledge and skills that include development practitioners, professionals, researchers and scientists. These courses include relevant theoretical lectures on the specific themes and extensive hands-on exercises using remote sensing and GIS tools and techniques. A one-day policy workshop has been designed to raise awareness among managers and decision-makers. Within the framework of SERVIR-Himalaya, a specialized training and awareness course has been initiated targeting to the youth. This course focuses on utilizing earth observation to sensitize youth and help them better understand climate change in the Himalayas. Furthermore, ICIMOD is strengthening existing partnerships and developing new partnerships to keep pace with rapidly changing technological advancements in order to customize the capacity building needs for the region. ICIMOD is promoting the Himalayan University consortium to extend its capacity building efforts for a longer-term continuity and sustainability. Through the SERVIR-Himalaya initiative, it is aiming to build new capacity building components such as - NASA DEVELOP to engage student research, MYCOE programs for youth, and small grants programs for young researchers and professionals. As a regional center, ICIMOD wants to continue to build regional capacity with the ultimate goal to leverage geospatial information services for the societal benefits to the mountain communities and relevant stakeholders.

Model-based calculations of surface mass balance of mountain glaciers for the purpose of water consumption planning: focus on Djankuat Glacier (Central Caucasus)

NASA Astrophysics Data System (ADS)

Rybak, O. O.; Rybak, E. A.

2018-01-01

Mountain glaciers act as regulators of run-off in the summer period, which is very crucial for economy especially in dynamically developing regions with rapidly growing population, such as Central Asia or the Northern Caucasus in Russia. In overall, glaciers stabilize water consumption in comparatively arid areas and provide conditions for sustainable development of the economy in mountainous regions and in the surrounding territories. A proper prediction of the glacial run-off is required to elaborate strategies of the regional development. This goal can be achieved by implementation of mathematical modeling methods into planning methodologies. In the paper, we consider one of the first steps in glacier dynamical modeling - surface mass balance simulation. We focus on the Djankuat Glacier in the Central Caucasus, where regular observations have been conducted during the last fifty years providing an exceptional opportunity to calibrate and to validate a mathematical model.

Thinking on Sichuan-Chongqing gas pipeline transportation system reform under market-oriented conditions

NASA Astrophysics Data System (ADS)

Duan, Yanzhi

2017-01-01

The gas pipeline networks in Sichuan and Chongqing (Sichuan-Chongqing) region have formed a fully-fledged gas pipeline transportation system in China, which supports and promotes the rapid development of gas market in Sichuan-Chongqing region. In the circumstances of further developed market-oriented economy, it is necessary to carry out further the pipeline system reform in the areas of investment/financing system, operation system and pricing system to lay a solid foundation for improving future gas production and marketing capability and adapting itself to the national gas system reform, and to achieve the objectives of multiparty participated pipeline construction, improved pipeline transportation efficiency and fair and rational pipeline transportation prices. In this article, main thinking on reform in the three areas and major deployment are addressed, and corresponding measures on developing shared pipeline economy, providing financial support to pipeline construction, setting up independent regulatory agency to enhance the industrial supervision for gas pipeline transportation, and promoting the construction of regional gas trade market are recommended.

Pharma Opportunities and Risks Multiply as Regulatory Reform Remakes APAC: Expanded Accelerated Pathways Challenge Developer Value Story, Evidence Collection, and Market Access Strategies.

PubMed

Grignolo, Alberto; Mingping, Zhang

2018-01-01

Sweeping reforms in the largest markets of the Asia-Pacific region are transforming the regulatory and commercial landscape for foreign pharmaceutical companies. Japan, South Korea, and China are leading the charge, establishing mechanisms and infrastructure that both reflect and help drive international regulatory convergence and accelerate delivery of needed, innovative products to patients. In this rapidly evolving regulatory and commercial environment, drug developers can benefit from reforms and proliferating accelerated pathway (AP) frameworks, but only with regulatory and evidence-generation strategies tailored to the region. Otherwise, they will confront significant pricing and reimbursement headwinds. Although APAC economies are at different stages of development, they share a common imperative: to balance pharmaceutical innovation with affordability. Despite the complexity of meeting these sometimes conflicting demands, companies that focus on demonstrating and delivering value for money, and that price new treatments reasonably and sustainably, can succeed both for their shareholders and the region's patient population.

The construction strategy and measures for ecological analysis of China's ports

NASA Astrophysics Data System (ADS)

Zhang, Lu; Zhao, Junjie; Shou, Youping; Wang, Ning; Qiao, Jianzhe; Tian, Mingjing

2018-04-01

The Port is an important transport hub, one of the important infrastructure of the national economy, the corresponding regional development has a great role in promoting.The construction of the port has been developed rapidly, but it has also brought about more serious environmental problems. Therefore, this paper discusses the nature of ecological ports, summarized the experience of ecological protection measures on the international advanced ports and port construction ecology. The central idea is to explore the construction of ecological port ideas and development countermeasures.

The role of bedrock in creating habitat in temperate watercourses

NASA Astrophysics Data System (ADS)

Entwistle, N. S.; Heritage, G. L.; Milan, D. J.

2016-12-01

Bedrock influenced rivers are a relatively common yet little studied river type across temperate regions, occurring predominantly in upland areas and in areas where isostatic rebound has promoted rapid watercourse downcutting through resistant bedrock. The presence of bedrock in the bed and banks exerts a major influence on channel development, controlling local flow hydraulics and subsequently influencing in-channel and valley bottom sedimentary feature development. This paper summarises extensive field audit evidence of bedrock influenced features on watercourses in the UK to characterise the diverse morphology of bedrock influenced channels and reviews the bedrock induced hydraulic influences on their development and maintenance. Such features include bedrock waterfalls, steps, rapids and cascades and associated alluvial deposits forming lee bars, bedrock obstruction bars, plunge pool bars and fine sediment drapes and veneers. Bedrock influence on valley bottom features is also reviewed and a functional typology is developed for this river type based on the feature assemblage and degree of bedrock/alluvial influence.

Hierarchical Regional Disparities and Potential Sector Identification Using Modified Agglomerative Clustering

NASA Astrophysics Data System (ADS)

Munandar, T. A.; Azhari; Mushdholifah, A.; Arsyad, L.

2017-03-01

Disparities in regional development methods are commonly identified using the Klassen Typology and Location Quotient. Both methods typically use the data on the gross regional domestic product (GRDP) sectors of a particular region. The Klassen approach can identify regional disparities by classifying the GRDP sector data into four classes, namely Quadrants I, II, III, and IV. Each quadrant indicates a certain level of regional disparities based on the GRDP sector value of the said region. Meanwhile, the Location Quotient (LQ) is usually used to identify potential sectors in a particular region so as to determine which sectors are potential and which ones are not potential. LQ classifies each sector into three classes namely, the basic sector, the non-basic sector with a competitive advantage, and the non-basic sector which can only meet its own necessities. Both Klassen Typology and LQ are unable to visualize the relationship of achievements in the development clearly of each region and sector. This research aimed to develop a new approach to the identification of disparities in regional development in the form of hierarchical clustering. The method of Hierarchical Agglomerative Clustering (HAC) was employed as the basis of the hierarchical clustering model for identifying disparities in regional development. Modifications were made to HAC using the Klassen Typology and LQ. Then, HAC which had been modified using the Klassen Typology was called MHACK while HAC which had been modified using LQ was called MACLoQ. Both algorithms can be used to identify regional disparities (MHACK) and potential sectors (MACLoQ), respectively, in the form of hierarchical clusters. Based on the MHACK in 31 regencies in Central Java Province, it is identified that 3 regencies (Demak, Jepara, and Magelang City) fall into the category of developed and rapidly-growing regions, while the other 28 regencies fall into the category of developed but depressed regions. Results of the MACLoQ implementation suggest that there is only 1 regency which falls into the basic-sector category (Banyumas), while the other regencies fall into the non-basic non-competitive sector category.

Rapid Change of Microbiota Diversity in the Gut but Not the Hepatopancreas During Gonadal Development of the New Shrimp Model Neocaridina denticulata.

PubMed

Cheung, Man Kit; Yip, Ho Yin; Nong, Wenyan; Law, Patrick Tik Wan; Chu, Ka Hou; Kwan, Hoi Shan; Hui, Jerome Ho Lam

2015-12-01

During evolution of animals, their co-evolution with bacteria has generally been ignored. Recent studies have provided evidences that the symbiotic bacteria in the animal gut can either be essential or contributing to the plasticity of the host. The Crustacea includes crab, crayfish, lobster, and shrimp and represents the second largest subphylum on the planet. Although there are already studies investigating the intestinal bacterial communities in crustaceans, none of them has examined the microbiota in different parts of the digestive system during the gonad development of the host. Here, we utilized a new shrimp model Neocaridina denticulata and sequenced the 16S rRNA using the Ion Torrent platform to survey the bacterial populations colonizing the hepatopancreas, foregut, and intestine, including midgut and hindgut, of the early, mid, and late ovarian maturation stages of the shrimp. The predominant bacteria phylum was found to be Proteobacteria, with more than 80 % reads from the gut flora at the early gonad development belonged to a Coxiella-type bacterium. Distinct bacterial communities can be detected between the hepatopancreas and gut, although no significant difference could be revealed between the different regions of the gut investigated. Surprisingly, during the gonad development, bacterial diversity changed rapidly in the gut but not the hepatopancreas. This study provides the first evidence that microbiota modified differentially in specific regions of the digestive tract during gonadal development of crustaceans.

Rapid finite-fault inversions in Southern California using Cybershake Green's functions

NASA Astrophysics Data System (ADS)

Thio, H. K.; Polet, J.

2017-12-01

We have developed a system for rapid finite fault inversion for intermediate and large Southern California earthquakes using local, regional and teleseismic seismic waveforms as well as geodetic data. For modeling the local seismic data, we use 3D Green's functions from the Cybershake project, which were made available to us courtesy of the Southern California Earthquake Center (SCEC). The use of 3D Green's functions allows us to extend the inversion to higher frequency waveform data and smaller magnitude earthquakes, in addition to achieving improved solutions in general. The ultimate aim of this work is to develop the ability to provide high quality finite fault models within a few hours after any damaging earthquake in Southern California, so that they may be used as input to various post-earthquake assessment tools such as ShakeMap, as well as by the scientific community and other interested parties. Additionally, a systematic determination of finite fault models has value as a resource for scientific studies on detailed earthquake processes, such as rupture dynamics and scaling relations. We are using an established least-squares finite fault inversion method that has been applied extensively both on large as well as smaller regional earthquakes, in conjunction with the 3D Green's functions, where available, as well as 1D Green's functions for areas for which the Cybershake library has not yet been developed. We are carrying out validation and calibration of this system using significant earthquakes that have occurred in the region over the last two decades, spanning a range of locations and magnitudes (5.4 and higher).

The Case for Investing in Secondary Education in Sub-Saharan Africa (SSA): Challenges and Opportunities

ERIC Educational Resources Information Center

Fredriksen, Birger; Fossberg, Camilla Helgø

2014-01-01

Over the next two decades, sub-Saharan Africa will face substantial pressure to expand its secondary education system. This is driven by the current low development of secondary education compared to other world regions, continued rapid population growth, the increase in the enrollment and completion rates at the primary education level, and the…

Learning to Question: The Roles of Multiple Hypotheses, Successive Approximations, Balloons and Toilet Paper in University Science Programs of Southwestern Amazonia

ERIC Educational Resources Information Center

Brown, I. Foster

2008-01-01

Learning to question is essential for determining pathways of conservation and development in southwestern Amazonia during a time of rapid global environmental change. Teaching such an approach in graduate science programs in regional universities can be done using play-acting and simulation exercises. Multiple working hypotheses help students…

Rapid Expansion of Higher Education in Turkey: The Challenges of Recently Established Public Universities (2006-2013)

ERIC Educational Resources Information Center

Özoglu, Murat; Gür, Bekir S.; Gümüs, Sedat

2016-01-01

Like many other countries around the world, Turkey has faced several challenges in expanding higher education (HE) opportunities to masses. Trying to meet the ever-growing demand for HE, Turkey has implemented a bold expansion plan by establishing 51 public universities (PUs) after 2006, mostly in less-developed regions of the country. This study…

Strategies in Ebola virus disease (EVD) diagnostics at the point of care

PubMed Central

Coarsey, Chad T.; Esiobu, Nwadiuto; Narayanan, Ramswamy; Pavlovic, Mirjana; Shafiee, Hadi; Asghar, Waseem

2017-01-01

Ebola virus disease (EVD) is a devastating, highly infectious illness with a high mortality rate. The disease is endemic to regions of Central and West Africa, where there is limited laboratory infrastructure and trained staff. The recent 2014 West African EVD outbreak has been unprecedented in case numbers and fatalities, and has proven that such regional outbreaks can become a potential threat to global public health, as it became the source for the subsequent transmission events in Spain and the USA. The urgent need for rapid and affordable means of detecting Ebola is crucial to control the spread of EVD and prevent devastating fatalities. Current diagnostic techniques include molecular diagnostics and other serological and antigen detection assays; which can be time-consuming, laboratory-based, often require trained personnel and specialized equipment. In this review, we discuss the various Ebola detection techniques currently in use, and highlight the potential future directions pertinent to the development and adoption of novel point-of-care diagnostic tools. Finally, a case is made for the need to develop novel microfluidic technologies and versatile rapid detection platforms for early detection of EVD. PMID:28440096

Payments for carbon sequestration to alleviate development pressure in a rapidly urbanizing region

USGS Publications Warehouse

Smith, Jordan W.; Dorning, Monica; Shoemaker, Douglas A.; Méley, Andréanne; Dupey, Lauren; Meentemeyer, Ross K.

2017-01-01

The purpose of this study was to determine individuals' willingness to enroll in voluntary payments for carbon sequestration programs through the use of a discrete choice experiment delivered to forest owners living in the rapidly urbanizing region surrounding Charlotte, North Carolina. We examined forest owners' willingness to enroll in payments for carbon sequestration policies under different levels of financial incentives (annual revenue), different contract lengths, and different program administrators (e.g., private companies versus a state or federal agency). We also examined the influence forest owners' sense of place had on their willingness to enroll in hypothetical programs. Our results showed a high level of ambivalence toward participating in payments for carbon sequestration programs. However, both financial incentives and contract lengths significantly influenced forest owners' intent to enroll. Neither program administration nor forest owners' sense of place influenced intent to enroll. Although our analyses indicated that payments from carbon sequestration programs are not currently competitive with the monetary returns expected from timber harvest or property sales, certain forest owners might see payments for carbon sequestration programs as a viable option for offsetting increasing tax costs as development encroaches and property values rise.

Development of a rapid assay to detect the dinoflagellate Amyloodinium ocellatum using loop-mediated isothermal amplification (LAMP).

PubMed

Picón-Camacho, Sara M; Thompson, William P; Blaylock, Reginald B; Lotz, Jeffrey M

2013-09-23

Amyloodinium ocellatum is a highly pathogenic dinoflagellate parasite with global distribution that causes high mortalities in the culture of tropical and sub-tropical marine and estuarine fishes. Diagnosis typically occurs through gross examination following the onset of morbidity, at which point treatment is of limited benefit. In the present study, a new molecular diagnostic tool for the rapid detection of A. ocellatum (AO) was developed using the loop-mediated isothermal amplification method (LAMP). The AO-LAMP assay designed is highly specific using a set of four primers - two outer and two inner primers targeting six different regions on the 5' end of the Small Subunit rDNA region (SSU rDNA) of A. ocellatum. The AO-LAMP assay, optimized for 25-30 min at 62°C, amplified the DNA from A. ocellatum extracted from both water and gill tissue samples and did not amplify DNA from four closely related dinoflagellate sp ecies. The detection limit of the AO-LAMP assay was 10 fg, exceptionally higher than the conventional PCR (1 pg). In addition, the standardized AO-LAMP assay was capable of detecting single tomonts and trophonts; the assay was not affected by the presence of possible inhibitory substances present in environmental water samples or gill samples. The AO-LAMP assay developed in the present study provides a novel useful tool for the simple, rapid and sensitive detection of A. ocellatum in water and gill tissue samples, which could assist in the early detection and improved control of A. ocellatum infections in aquaculture systems. Copyright © 2013 Elsevier B.V. All rights reserved.

Brain cholinergic involvement during the rapid development of tolerance to morphine

NASA Technical Reports Server (NTRS)

Wahba, Z. Z.; Oriaku, E. T.; Soliman, S. F. A.

1987-01-01

The effect of repeated administration of morphine on the activities of the cholinergic enzymes, choline acetyltransferase (ChAT) and acetylcholinesterase (AChE), in specific brain regions were studied in rats treated with 10 mg/kg morphine for one or two days. Repeated administration of morphine was associated with a decline in the degree of analgesia produced and with a significant increase of AChE activity of the medulla oblongata. A single injection of morphine resulted in a significant decline in ChAT activity in the hypothalamus, cerebellum, and medulla oblongata regions. After two consecutive injections, no decline in ChAT was observed in these regions, while in the cerebral cortex the second administration elicited a significant decline. The results suggest that the development of tolerance to morphine may be mediated through changes in ChAT activity and lend support to the involvement of the central cholinergic system in narcotic tolerance.

Dental caries imaging using hyperspectral stimulated Raman scattering microscopy

NASA Astrophysics Data System (ADS)

Wang, Zi; Zheng, Wei; Jian, Lin; Huang, Zhiwei

2016-03-01

We report the development of a polarization-resolved hyperspectral stimulated Raman scattering (SRS) imaging technique based on a picosecond (ps) laser-pumped optical parametric oscillator system for label-free imaging of dental caries. In our imaging system, hyperspectral SRS images (512×512 pixels) in both fingerprint region (800-1800 cm-1) and high-wavenumber region (2800-3600 cm-1) are acquired in minutes by scanning the wavelength of OPO output, which is a thousand times faster than conventional confocal micro Raman imaging. SRS spectra variations from normal enamel to caries obtained from the hyperspectral SRS images show the loss of phosphate and carbonate in the carious region. While polarization-resolved SRS images at 959 cm-1 demonstrate that the caries has higher depolarization ratio. Our results demonstrate that the polarization resolved-hyperspectral SRS imaging technique developed allows for rapid identification of the biochemical and structural changes of dental caries.

[Principal stages in the Cenozoic diversification of shallow-water molluscan faunas in the North Pacific].

PubMed

Kafanov, A I

2006-01-01

Cluster analysis of bivalve species recorded in Cenozoic deposits in Sakhalin Island, western Kamchatka, Hokkaido, and California was used to determine geological age of the modem North Pacific biogeographic region and its constituent subregions (Japan-Mandchurian, Beringian, and Oregon-Sitkan). The North Pacific region developed during the Paleogene-Neogene transition due to Drake Passage opening to deep-water movement, formation of the deep-water Antarctic Circumpolar Current, and the change in climate from greenhouse to psychospheric. Differentiation of the three subregions within the North Pacific Region seems to have occurred in late Miocene-early Pliocene, about 5.6 millions years ago and was probably due to the flooding of the Bering Land Bridge and development of the present configuration of circulation in the North Pacific. In the Northwest Pacific, during Paleogene and early Neogene, the faunal diversification occurred more rapidly and was more extensive than in the Northeast Pacific.

Photonics: From target recognition to lesion detection

NASA Technical Reports Server (NTRS)

Henry, E. Michael

1994-01-01

Since 1989, Martin Marietta has invested in the development of an innovative concept for robust real-time pattern recognition for any two-dimensioanal sensor. This concept has been tested in simulation, and in laboratory and field hardware, for a number of DOD and commercial uses from automatic target recognition to manufacturing inspection. We have now joined Rose Health Care Systems in developing its use for medical diagnostics. The concept is based on determining regions of interest by using optical Fourier bandpassing as a scene segmentation technique, enhancing those regions using wavelet filters, passing the enhanced regions to a neural network for analysis and initial pattern identification, and following this initial identification with confirmation by optical correlation. The optical scene segmentation and pattern confirmation are performed by the same optical module. The neural network is a recursive error minimization network with a small number of connections and nodes that rapidly converges to a global minimum.

Linking Backbarrier Lacustrine Stratigraphy with Spatial Dynamics of Shoreline Retreat in a Rapidly Subsiding Region of the Mississippi River Delta

NASA Astrophysics Data System (ADS)

Dietz, M.; Liu, K. B.; Bianchette, T. A.; Yao, Q.

2017-12-01

The shoreline along the northern Gulf of Mexico is rapidly retreating as coastal features of abandoned Mississippi River delta complexes erode and subside. Bay Champagne is located in the Caminada-Moreau headland, a region of shoreline west of the currently active delta that has one of the highest rates of retreat and land loss. As a result, this site has transitioned from a stable, circular inland lake several kilometers from the shore to a frequently perturbed, semi-circular backbarrier lagoon, making it ideal to study the environmental effects of progressive land loss. Analyses of clastic layers in a series of sediment cores collected at this site over the past decade indicate the lake was less perturbed in the past and has become increasingly more sensitive to marine incursion events caused by tropical cyclones. Geochemical and pollen analyses of these cores also reveal profound changes in environmental and chemical conditions in Bay Champagne over the past century as the shoreline has retreated. Through relating stratigraphy to spatial changes observed from satellite imagery, this study attempts to identify the tipping point at which Bay Champagne began the transition from an inland lake to a backbarrier environment, and to determine the rate at which this transition occurred. Results will be used to develop a model of the environmental transition experienced by a rapidly retreating coastline and to predict how other regions of the Mississippi River deltaic system could respond to future shoreline retreat.

Impacts of SST Patterns on Rapid Intensification of Typhoon Megi (2010)

NASA Astrophysics Data System (ADS)

Kanada, Sachie; Tsujino, Satoki; Aiki, Hidenori; Yoshioka, Mayumi K.; Miyazawa, Yasumasa; Tsuboki, Kazuhisa; Takayabu, Izuru

2017-12-01

Typhoon Megi (2010), a very intense tropical cyclone with a minimum central pressure of 885 hPa, was characterized by especially rapid intensification. We investigated this intensification process by a simulation experiment using a high-resolution (0.02° × 0.02°) three-dimensional atmosphere-ocean coupled regional model. We also performed a sensitivity experiment with a time-fixed sea surface temperature (SST). The coupled model successfully simulated the minimum central pressure of Typhoon Megi, whereas the fixed SST experiment simulated an excessively low minimum central pressure of 839 hPa. The simulation results also showed a close relationship between the radial SST profiles and the rapid intensification process. Because the warm sea increased near-surface water vapor and hence the convective available potential energy, the high SST in the eye region facilitated tall and intense updrafts inside the radius of maximum wind speed and led to the start of rapid intensification. In contrast, high SST outside this radius induced local secondary updrafts that inhibited rapid intensification even if the mean SST in the core region exceeded 29.0°C. These secondary updrafts moved inward and eventually merged with the primary eyewall updrafts. Then the storm intensified rapidly when the high SST appeared in the eye region. Thus, the changes in the local SST pattern around the storm center strongly affected the rapid intensification process by modulating the radial structure of core convection. Our results also show that the use of a high-resolution three-dimensional atmosphere-ocean coupled model offers promise for improving intensity forecasts of tropical cyclones.

Development of a Hybrid RANS/LES Method for Compressible Mixing Layer Simulations

NASA Technical Reports Server (NTRS)

Georgiadis, Nicholas J.; Alexander, J. Iwan D.; Reshotko, Eli

2001-01-01

A hybrid method has been developed for simulations of compressible turbulent mixing layers. Such mixing layers dominate the flows in exhaust systems of modem day aircraft and also those of hypersonic vehicles currently under development. The hybrid method uses a Reynolds-averaged Navier-Stokes (RANS) procedure to calculate wall bounded regions entering a mixing section, and a Large Eddy Simulation (LES) procedure to calculate the mixing dominated regions. A numerical technique was developed to enable the use of the hybrid RANS/LES method on stretched, non-Cartesian grids. The hybrid RANS/LES method is applied to a benchmark compressible mixing layer experiment. Preliminary two-dimensional calculations are used to investigate the effects of axial grid density and boundary conditions. Actual LES calculations, performed in three spatial directions, indicated an initial vortex shedding followed by rapid transition to turbulence, which is in agreement with experimental observations.

A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses.

PubMed

Hall, Neil; Karras, Marianna; Raine, J Dale; Carlton, Jane M; Kooij, Taco W A; Berriman, Matthew; Florens, Laurence; Janssen, Christoph S; Pain, Arnab; Christophides, Georges K; James, Keith; Rutherford, Kim; Harris, Barbara; Harris, David; Churcher, Carol; Quail, Michael A; Ormond, Doug; Doggett, Jon; Trueman, Holly E; Mendoza, Jacqui; Bidwell, Shelby L; Rajandream, Marie-Adele; Carucci, Daniel J; Yates, John R; Kafatos, Fotis C; Janse, Chris J; Barrell, Bart; Turner, C Michael R; Waters, Andrew P; Sinden, Robert E

2005-01-07

Plasmodium berghei and Plasmodium chabaudi are widely used model malaria species. Comparison of their genomes, integrated with proteomic and microarray data, with the genomes of Plasmodium falciparum and Plasmodium yoelii revealed a conserved core of 4500 Plasmodium genes in the central regions of the 14 chromosomes and highlighted genes evolving rapidly because of stage-specific selective pressures. Four strategies for gene expression are apparent during the parasites' life cycle: (i) housekeeping; (ii) host-related; (iii) strategy-specific related to invasion, asexual replication, and sexual development; and (iv) stage-specific. We observed posttranscriptional gene silencing through translational repression of messenger RNA during sexual development, and a 47-base 3' untranslated region motif is implicated in this process.

Gigaflop (billion floating point operations per second) performance for computational electromagnetics

NASA Technical Reports Server (NTRS)

Shankar, V.; Rowell, C.; Hall, W. F.; Mohammadian, A. H.; Schuh, M.; Taylor, K.

1992-01-01

Accurate and rapid evaluation of radar signature for alternative aircraft/store configurations would be of substantial benefit in the evolution of integrated designs that meet radar cross-section (RCS) requirements across the threat spectrum. Finite-volume time domain methods offer the possibility of modeling the whole aircraft, including penetrable regions and stores, at longer wavelengths on today's gigaflop supercomputers and at typical airborne radar wavelengths on the teraflop computers of tomorrow. A structured-grid finite-volume time domain computational fluid dynamics (CFD)-based RCS code has been developed at the Rockwell Science Center, and this code incorporates modeling techniques for general radar absorbing materials and structures. Using this work as a base, the goal of the CFD-based CEM effort is to define, implement and evaluate various code development issues suitable for rapid prototype signature prediction.

Global and regional drivers of accelerating CO2 emissions

PubMed Central

Raupach, Michael R.; Marland, Gregg; Ciais, Philippe; Le Quéré, Corinne; Canadell, Josep G.; Klepper, Gernot; Field, Christopher B.

2007-01-01

CO2 emissions from fossil-fuel burning and industrial processes have been accelerating at a global scale, with their growth rate increasing from 1.1% y−1 for 1990–1999 to >3% y−1 for 2000–2004. The emissions growth rate since 2000 was greater than for the most fossil-fuel intensive of the Intergovernmental Panel on Climate Change emissions scenarios developed in the late 1990s. Global emissions growth since 2000 was driven by a cessation or reversal of earlier declining trends in the energy intensity of gross domestic product (GDP) (energy/GDP) and the carbon intensity of energy (emissions/energy), coupled with continuing increases in population and per-capita GDP. Nearly constant or slightly increasing trends in the carbon intensity of energy have been recently observed in both developed and developing regions. No region is decarbonizing its energy supply. The growth rate in emissions is strongest in rapidly developing economies, particularly China. Together, the developing and least-developed economies (forming 80% of the world's population) accounted for 73% of global emissions growth in 2004 but only 41% of global emissions and only 23% of global cumulative emissions since the mid-18th century. The results have implications for global equity. PMID:17519334

Using Social Science to Ensure Sustainable Development Centered on Human Well-being in Costa Rica

NASA Astrophysics Data System (ADS)

Hunt, C. A.; Durham, W. H.; Gaffikin, L.

2012-12-01

When then president José Figueres Ferrer invited the world to use Costa Rica as a "laboratory for sustainable development" in 1997, the country's fame as a biodiversity mecca was firmly established. Yet despite vast investment, conservation-related interventions in the cantons of Osa and Golfito along the country's southern Pacific coast have been seen as overly conservation-oriented and carried out "with its back to the communities." By ignoring human well-being, these interventions have been unable to overcome the region's vast disparities in access to resources and general state of underdevelopment despite investments of many millions of dollars in recent decades. With the country's third international airport and Central America's largest hydroelectric project proposed for the region, as well as other infrastructure-driven development currently underway, the region is poised to undergo rapid change. This presentation first describes the Osa-Golfito Initiative (INOGO), an interdisciplinary effort facilitated by the Stanford Woods Institute for the Environment to development a long term strategic action plan that ensures a development trajectory focused on human and environmental well-being. Whereas a concurrent presentation will focus on biophysical components of INOGO, the focus here is on the often-overlooked contributions of social science for ensuring the region's future sustainability. An anthropological approach is taken to assess the assets and resources of the region's residents, and the obstacles and challenges as they perceive them. This groundwork provides a crucial link between individual and local realities, and the regional and national political economy, and thus provides greater probability of sustainable development occurring with its "face to the communities.";

Research and Development in the Anthropogenic Cryosphere

NASA Astrophysics Data System (ADS)

de Jong, C.; Luthe, T.; Hohenwallne, D.

2009-04-01

Much of todays cryosphere research is oriented towards the polar regions and is strongly supported by large associations and funding. On the other hand, funding and institutional support is still limited for mountains. In Europe, mountain research is mainly funded through Alpine Space Interregs, FP7, ESF and COST. However, there is growing global change pressure on mountain regions, particularly in the more fragile, higher altitudes such as between 1000 - 3200 m in the Alps. Although these zones are comparable to the Arctic in terms of climatic and physiographic conditions, they are not in terms of human pressures and atmospheric pollution released from surrounding agglomerations. A re-orientation of research into more applied projects that tackle present day problems is necessary. Not only is climate change rapidly changing the face of mountains, socio-economic multipliers are also acting fast. New problems such as conflicts over natural resources are evolving at a rapid rate, requiring research funding and projects to respond at according rates if timely and efficient solutions are to be proposed. Other problems include contamination of high altitude lakes and ecosystems through atmospheric precipitation of persistent organic pollutants and concentration of radio-active substances. The rapid melt of glacier ice is also releasing pollutants that have been captured for many decades. Many of the present day problems develop due to a miscomprehension of the cryosphere. Short-term economical reasoning outweighs the long-term ecological impacts that could be very counter-productive at the long term. Both the glaciological, snow, permafrost, geomorphological, ecological, hydrological and atmospheric conditions are increasingly heavily modified by human impacts. The effects include the alteration of the ice cover (by artificial covering of glaciers), production of artificial snow cover, snow and ground compaction, erosion, landsliding, change in vegetation cover and fauna, modification of local hydrological cycle and modification of local climate and atmospheric pollution. Research in mountains should balance the needs of scientists and stakeholders alike, but this requires re-orientation of mountain research into multi-disciplinary projects next to basic science. Unlike the polar regions (with exceptions like Longyearbyen, Spitzbergen), seasonal population pressure in mountains is intense, causing local problems such as water scarcity. Research in these areas therefore requires close collaboration with stakeholders. Large-scale events such as Winter Olympics that have benefited from the classical mountain cryosphere in the past are now increasingly becoming internationally competitive and independent of the natural cryospheric conditions. New ski areas are developed world-wide in zones that do not offer natural climatological conditions for maintaining ski runs. Sub-zero temperatures are used as a basis for snow-making even in those regions that do not benefit from sufficient natural snow-fall. Large-scale landscape modification results in motorway like ski runs, large snow water reservoirs and extensive housing projects on vulnerable slopes. Due to steep and remote topography, transport is often dominated by cars and increases CO2 emissions intensively at local hot spots. In future, mountain slopes that have been heavily modified for winter tourism, may rapidly become neglected zones due to rapid snowline retreat. As the summer season extends, the modifications to the cryosphere will become more and more evident. Even with positive temperatures and snow-free ground, the vegetation season will not be extensive enough to enable rapid recovery, especially at altitudes above 2000 m a.s.l and north-facing aspects. Several decades of anthropogenic modification may require several centuries of recovery to provide new economical benefits.

Rapid identification of probiotic Lactobacillus species by multiplex PCR using species-specific primers based on the region extending from 16S rRNA through 23S rRNA.

PubMed

Kwon, Hyuk-Sang; Yang, Eun-Hee; Yeon, Seung-Woo; Kang, Byoung-Hwa; Kim, Tae-Yong

2004-10-15

This study aimed to develop a novel multiplex polymerase chain reaction (PCR) primer set for the identification of seven probiotic Lactobacillus species such as Lactobacillus acidophilus, Lactobacillus delbrueckii, Lactobacillus casei, Lactobacillus gasseri, Lactobacillus plantarum, Lactobacillus reuteri and Lactobacillus rhamnosus. The primer set, comprising of seven specific and two conserved primers, was derived from the integrated sequences of 16S and 23S rRNA genes and their rRNA intergenic spacer region of each species. It was able to identify the seven target species with 93.6% accuracy, which exceeds that of the general biochemical methods. The phylogenetic analyses, using 16S rDNA sequences of the probiotic isolates, also provided further support that the results from the multiplex PCR assay were trustworthy. Taken together, we suggest that the multiplex primer set is an efficient tool for simple, rapid and reliable identification of seven Lactobacillus species.

CHIPS: Monitoring Colonias along the United States-Mexico border in Texas

USGS Publications Warehouse

Parcher, Jean W.

2008-01-01

Colonias, which are unincorporated border settlements in the United States, have emerged in rural areas without the governance and services normally provided by local government. The expansion of colonias in the United States-Mexico border region can be traced to the rapid growth associated with the Mexican Border Industrial Program during the 1960s. This rapid population growth created a lack of affordable housing, causing new migrants in the United States to purchase rural homestead lots through a contract-for-deed program from land developers. Because of the need to keep prices affordable and the absence of effective land-use controls, these homesteads expanded into rural subdivisions, commonly called colonias, without proper infrastructure. Colonias have been identified in the four U.S. border states, with Texas having designated the majority, which numbered over 1,400 colonias in 2001. Because the region is binationally interconnected economically, politically, and socially, the phenomenon of colonias in the United States is a transborder issue.

Case Study of Hurricane Felix (2007) Rapid Intensification

NASA Astrophysics Data System (ADS)

Colon-Pagan, I. C.; Davis, C. A.; Holland, G. J.

2010-12-01

The forecasting of tropical cyclones (TC) rapid intensification (RI) is one of the most challenging problems that the operational community experiences. Research advances leading to improvements in predicting this phenomenon would help government agencies make decisions that could reduce the impact on communities that are so often affected by these weather-related events. It has been proposed that TC RI is associated to various factors, including high sea-surface temperatures, weak vertical wind shear, and the ratio of inertial to static stability, which improves the conversion of diabatic heating into circulation. While a cyclone develops, the size of the region of high inertial stability (IS) decreases whereas the magnitude of IS increases. However, it’s unknown whether this is a favorable condition or a result of RI occurrences. The purpose of this research, therefore, is to determine if the IS follows, leads or changes in sync with the intensity change by studying Hurricane Felix (2007) RI phase. Results show a trend of increasing IS before the RI stage, followed by an expansion of the region of high IS. This episode is eventually followed by a decrease in both the intensity and region of positive IS, while the maximum wind speed intensity of the TC diminished. Therefore, we propose that monitoring the IS may provide a forecast tool to determine RI periods. Other parameters, such as static stability, tangential wind, and water vapor mixing ratio may help identify other features of the storm, such as circulation and eyewall formation. The inertial stability (IS) trend during the period of rapid intensification, which occurred between 00Z and 06Z of September 3rd. Maximum values of IS were calculated before and during this period of RI within a region located 30-45 km from the center. In fact, this region could represent the eye-wall of Hurricane Felix.

How Social Media is Changing the Practice of Regional Anesthesiology.

PubMed

Schwenk, Eric S; Chu, Larry F; Gupta, Rajnish K; Mariano, Edward R

2017-06-01

This review summarizes the current applications of social media in regional anesthesiology, describes ways that specific platforms may promote growth, and briefly discusses limitations and future directions. Although Facebook users outnumber Twitter users, the latter has been better studied in regional anesthesiology and may have the advantages of speed and expansion of reach. Highly tweeted publications are more likely to be cited in the medical literature, and twitter-enhanced journal clubs facilitate communication regarding important articles with international colleagues. In both the United States and internationally, Twitter has been shown to enhance the anesthesiology conference experience, changing communication among attendees and non-attendees. YouTube and podcasts are quickly finding a niche in regional anesthesiology for just-in-time training and continuing professional development. Social media use is rapidly growing in regional anesthesiology, and benefits include global interaction and knowledge translation within the specialty and with the general public.

How Social Media is Changing the Practice of Regional Anesthesiology

PubMed Central

Schwenk, Eric S.; Chu, Larry F.; Gupta, Rajnish K.; Mariano, Edward R.

2017-01-01

Purpose of Review This review summarizes the current applications of social media in regional anesthesiology, describes ways that specific platforms may promote growth, and briefly discusses limitations and future directions. Recent findings Although Facebook users outnumber Twitter users, the latter has been better studied in regional anesthesiology and may have the advantages of speed and expansion of reach. Highly tweeted publications are more likely to be cited in the medical literature, and twitter-enhanced journal clubs facilitate communication regarding important articles with international colleagues. In both the United States and internationally, Twitter has been shown to enhance the anesthesiology conference experience, changing communication among attendees and non-attendees. YouTube and podcasts are quickly finding a niche in regional anesthesiology for just-in-time training and continuing professional development. Summary Social media use is rapidly growing in regional anesthesiology, and benefits include global interaction and knowledge translation within the specialty and with the general public. PMID:29422779

The research on regional conservation planning of urban historical and cultural areas based on GIS

NASA Astrophysics Data System (ADS)

Li, Shangli; Xu, Jian; Li, Qian

2017-06-01

With the rapid economic development and the growth of population happening in the urban historical and cultural areas, heritage and historical buildings along with their natural and artificial surrounding environments are suffering constructive destruction. Due to the lack of precise partition of protection region and construction control region in the local cultural relics protection law, traditional regional conservation planning cannot engaged with the urban controllability detailed planning very well. According to the several protection regulations about heritage and historical buildings from latest laws, we choose Baxian Temple area to study on the improvments of traditional regional conservation planning. The technical methods of this study mainly rely on GIS, which can complete the fundamental work of each stage. With the analytic hierarchy process(AHP), the comprehensive architectural value assessments can be calculated according to the investigation results. Based on the calculation results and visual corridor analysis, the precise range of protection region and construction control region can be decided and the specific protection measures can be formulated.

Obsidian provenance research in the Americas.

PubMed

Glascock, Michael D

2002-08-01

The characterization of archaeological materials to support provenance research has grown rapidly over the past few decades. Volcanic obsidian has several unique properties that make it the ideal archaeological material for studying prehistoric trade and exchange. This Account describes our laboratory's development of a systematic methodology for the characterization of obsidian sources and artifacts from Mesoamerica and other regions of North and South America in support of archaeological research.

Snow mapping from space platforms

NASA Technical Reports Server (NTRS)

Itten, K. I.

1980-01-01

The paper considers problems of optimum resolution, periodicity, and wavelength bands used for snow mapping. Analog and digital methods were used for application of satellite data; techniques were developed for producing steamflow forecasts, hydroelectric power generation regulation data, irrigation potentials, and information on the availability of drinking water supplies. Future systems will utilize improved spectral band selection, new spectral regions, higher repetition rates, and more rapid access to satellite data.

Heat waves imposed during early pod development in soybean (Glycine max) cause significant yield loss despite a rapid recovery from oxidative stress

USDA-ARS?s Scientific Manuscript database

This study is the first field based experiment that uses IR heaters to study the effects of a regionally defined heat wave on soybean physiology and productivity. The heating technology was successful and all of the heat waves were maintained at the target temperature for the three day duration of t...

Making Healthy Minds Healthy Bodies: An Activity-Theoretical Analysis of the Development and Organizational Adaptation of a Medical Service-Learning Program

ERIC Educational Resources Information Center

Powell, Tamara J.

2013-01-01

Physician workforce shortages in California are projected to grow rapidly in the next ten years, particularly in inner-city and rural regions. In response to this anticipated need, the University of California's medical schools are increasing enrollment and working to implement and evaluate new programs and curricula to prepare graduates to work…

Impacts of heavy groundwater pumping on hydrogeological conditions in Libya: Past and present development and future prognosis on a regional scale

NASA Astrophysics Data System (ADS)

Elgzeli, Yousef M.; Ondovčin, Tomáš; Hrkal, Zbyněk; Krásný, Jiří; Mls, Jiří

2013-06-01

Elgzeli, Y.M., Ondovčin, T., Hrkal, Z., Krasny, J. and Mls, J. 2011. Impacts of heavy groundwater pumping on hydrogeological conditions in Libya: Past and present development and future prognosis on a regional scale. Acta Geologica Polonica, 63 (2), 283-296. Warszawa. Libya, like many other regions with arid climates, suffers from inadequate water resources to cover all the needs of this rapidly developing country. Increasing amounts of water are needed to supply the population, as well as for agricultural irrigation and industrial use. As groundwater is the main water source in the country, it represents a natural resource of the highest economic and social importance. Conceptual and numerical models were implemented on a regional scale to show how the natural situation has changed following heavy groundwater abstraction during the last decades in the northwestern part of the country. The results of the numerical model indicated that the current zones of depression of the piezometric surface could have been caused by smaller withdrawn amounts than previously estimated. The differences in the assessed withdrawn groundwater volumes seem to be quite high and might have a considerable influence on the future possibilities of groundwater use in the study region.

Three ingredients for Improved global aftershock forecasts: Tectonic region, time-dependent catalog incompleteness, and inter-sequence variability

USGS Publications Warehouse

Page, Morgan T.; Van Der Elst, Nicholas; Hardebeck, Jeanne L.; Felzer, Karen; Michael, Andrew J.

2016-01-01

Following a large earthquake, seismic hazard can be orders of magnitude higher than the long‐term average as a result of aftershock triggering. Because of this heightened hazard, emergency managers and the public demand rapid, authoritative, and reliable aftershock forecasts. In the past, U.S. Geological Survey (USGS) aftershock forecasts following large global earthquakes have been released on an ad hoc basis with inconsistent methods, and in some cases aftershock parameters adapted from California. To remedy this, the USGS is currently developing an automated aftershock product based on the Reasenberg and Jones (1989) method that will generate more accurate forecasts. To better capture spatial variations in aftershock productivity and decay, we estimate regional aftershock parameters for sequences within the García et al. (2012) tectonic regions. We find that regional variations for mean aftershock productivity reach almost a factor of 10. We also develop a method to account for the time‐dependent magnitude of completeness following large events in the catalog. In addition to estimating average sequence parameters within regions, we develop an inverse method to estimate the intersequence parameter variability. This allows for a more complete quantification of the forecast uncertainties and Bayesian updating of the forecast as sequence‐specific information becomes available.

Molecular characterization of multidrug-resistant Mycobacterium tuberculosis isolated in Nepal.

PubMed

Poudel, Ajay; Nakajima, Chie; Fukushima, Yukari; Suzuki, Haruka; Pandey, Basu Dev; Maharjan, Bhagwan; Suzuki, Yasuhiko

2012-06-01

Despite the fact that Nepal is one of the first countries globally to introduce multidrug-resistant tuberculosis (MDR-TB) case management, the number of MDR-TB cases is continuing to rise in Nepal. Rapid molecular tests applicable in this setting to identify resistant organisms would be an effective tool in reversing this trend. To develop such tools, information about the frequency and distribution of mutations that are associated with phenotypic drug resistance in Mycobacterium tuberculosis is required. In the present study, we investigated the prevalence of mutations in rpoB and katG genes and the inhA promoter region in 158 M. tuberculosis isolates (109 phenotypically MDR and 49 non-MDR isolates collected in Nepal) by DNA sequencing. Mutations affecting the 81-bp rifampin (RIF) resistance-determining region (RRDR) of rpoB were identified in 106 of 109 (97.3%) RIF-resistant isolates. Codons 531, 526, and 516 were the most commonly affected, at percentages of 58.7, 15.6, and 15.6%, respectively. Of 113 isoniazid (INH)-resistant isolates, 99 (87.6%) had mutations in the katG gene, with Ser315Thr being the most prevalent (81.4%) substitution. Mutations in the inhA promoter region were detected in 14 (12.4%) INH-resistant isolates. The results from this study provide an overview of the current situation of RIF and INH resistance in M. tuberculosis in Nepal and can serve as a basis for developing or improving rapid molecular tests to monitor drug-resistant strains in this country.

The heritage of radiotracers for PET

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fowler, J.S.; Wolf, A.P.

The history of PET research clearly demonstrates that it is advances in chemistry coupled with a detailed examination of the biochemistry of new radiotracers which has allowed the PET method to be applied to new areas of biology and medicine. Radiotracers whose regional distribution reflects glucose metabolism, neutrotransmitter activity and enzyme activity have all required the development of rapid synthetic methods for the radiotracers themselves and the characterization of their biochemical behavior. This article traces some of the advances in the production of labeled precursors and in radiotracer synthesis and evaluation which have shaped the rapidly expanding application of PETmore » to problems in the neurosciences, in cardiology and in oncology. 54 refs.« less

Repeated divergent selection on pigmentation genes in a rapid finch radiation

PubMed Central

Campagna, Leonardo; Repenning, Márcio; Silveira, Luís Fábio; Fontana, Carla Suertegaray; Tubaro, Pablo L.; Lovette, Irby J.

2017-01-01

Instances of recent and rapid speciation are suitable for associating phenotypes with their causal genotypes, especially if gene flow homogenizes areas of the genome that are not under divergent selection. We study a rapid radiation of nine sympatric bird species known as capuchino seedeaters, which are differentiated in sexually selected characters of male plumage and song. We sequenced the genomes of a phenotypically diverse set of species to search for differentiated genomic regions. Capuchinos show differences in a small proportion of their genomes, yet selection has acted independently on the same targets in different members of this radiation. Many divergent regions contain genes involved in the melanogenesis pathway, with the strongest signal originating from putative regulatory regions. Selection has acted on these same genomic regions in different lineages, likely shaping the evolution of cis-regulatory elements, which control how more conserved genes are expressed and thereby generate diversity in classically sexually selected traits. PMID:28560331

Bone Density Development of the Temporal Bone Assessed by Computed Tomography.

PubMed

Takahashi, Kuniyuki; Morita, Yuka; Ohshima, Shinsuke; Izumi, Shuji; Kubota, Yamato; Horii, Arata

2017-12-01

The temporal bone shows regional differences in bone development. The spreading pattern of acute mastoiditis shows age-related differences. In infants, it spreads laterally and causes retroauricular swelling, whereas in older children, it tends to spread medially and causes intracranial complications. We hypothesized that bone maturation may influence the spreading pattern of acute mastoiditis. Eighty participants with normal hearing, aged 3 months to 42 years, participated in this study. Computed tomography (CT) values (Hounsfield unit [HU]) in various regions of the temporal bone, such as the otic capsule (OC), lateral surface of the mastoid cavity (LS), posterior cranial fossa (PCF), and middle cranial fossa (MCF), were measured as markers of bone density. Bone density development curves, wherein CT values were plotted against age, were created for each region. The age at which the CT value exceeded 1000 HU, which is used as an indicator of bone maturation, was calculated from the development curves and compared between the regions. The OC showed mature bone at birth, whereas the LS, PCF, and MCF showed rapid maturation in early childhood. However, there were significant regional differences in the ages of maturation: 1.7, 3.9, and 10.8 years for the LS, PCF, and MCF, respectively. To our knowledge, this is the first report to show regional differences in the maturation of temporal bone, which could partly account for the differences in the spreading pattern of acute mastoiditis in individuals of different ages.

Urbanization Process Monitoring in Northwest China based on DMSP/OLS Nighttime Light Data

NASA Astrophysics Data System (ADS)

Wang, K.; Bai, L. Y.; Feng, J. Z.

2017-02-01

In recent years, the DMSP/OLS nighttime light data have been widely applied to various fields such as monitoring and evaluation of urbanization, estimation of social economy, economical environment and health effects, hazards analysis, and fisheries research. The general urbanized level in China has rapidly developed since the 1990s, and the cities in northwest China, which were important population centres of the ancient silk road, have also been developed in a high speed thanks to China’s national strategy of Western Development. Given the Xinjiang autonomous region as a core area of One Belt and One Road, it is very necessary to study the urbanization processes and changes of its urban system and the whole northwest region of China. In this paper, we extracted built-up areas of the cities in northwest China in 1992, 1997, 2002, 2007, and 2012, evaluated urban expansion and spatial pattern through appropriate indexes, and also quantitatively analyzed the urbanized level of each city. The results showed that the cities in northwest China generally presented high strong and rapid expansion, but there were some large differences among cities. Urban expansion forms alternate with exterior expansion and interior filling, in general, the cities externally expandedafter 2002 and internally filledbefore 2002, meanwhile, there were a high positive correlation between urban built-up areas and population growth in Xinjiang autonomous.

Metal-promoted titania photocatalysis for destruction of nitrates and organics from aqueous environments.

PubMed

Anderson, James A

2018-01-13

This review article provides an overview of activities in the rapidly developing field of water purification via photocatalytic methods and focuses on the removal of nitrate ions with simultaneous removal of the hole scavenger. Many of the issues associated with provision of potable water in the developing world may be resolved by the use of simple physical methodologies such as filtration. However, many of the issues associated with water purity in the developed world involve complex, stable molecules present at low concentrations that are nonetheless capable of producing toxic effects in plants and animals and that require more demanding removal technologies. Photocatalytic methods can be operated remotely and often show minimal production of undesired side products. Titania alone shows limitations, not only in terms of the slow rate of photoreduction of nitrate but also in terms of selectivity and the need to employ radiation in the UV region due to the magnitude of the band gap. Key challenges may be defined as: reducing the band gap/increasing absorption in the visible region, enhancing the adsorption capacity/access to the surface sites and reducing the rate of hole/electron recombination. The present article will focus on the use of titania-based materials that involve metal co-catalysts for nitrate reduction.This article is part of a discussion meeting issue 'Providing sustainable catalytic solutions for a rapidly changing world'. © 2017 The Author(s).

DOE Office of Scientific and Technical Information (OSTI.GOV)

Leong, JoAnn Ching

The main objective for this study was the development of a rapid diagnostic method for IHN virus in fish tissue samples. The rationale for developing new techniques for diagnosing IHNV infection was that present methods were time consuming and dependent on virus neutralization by specific antisera, a reagent that was not readily available or reliable. Fish pathologists required a rapid detection method which was sensitive enough to detect virus strain differences so that they could provide data for effective management decisions in controlling the spread of IHNV. Bonneville Power Administration's (BPA) role in efforts in fish diseases and more genericallymore » the protection, mitigation, and enhancement of Columbia River salmon and steelhead populations, is mandated by Congress through the Pacific Northwest Electric Power Planning and Conservation Act (Regional Act), Pub. L. 96-501. Section 4 (h) of the Regional Act directs the Northwest Power Planning Council to develop a Fish and Wildlife Program. BPA's Administrator is authorized in Section 4 (h) (10) (A) to ''use funds and the authorities available to the extent affected by the development and operation of any hydroelectric project of the Columbia River and its tributaries''. The fund is to be used to implement measures that are consistent with the Council's Fish and Wildlife Program. The research detailed in this final report is consistent with these objectives. This final report has been prepared as part of BPA's policy to encourage the preservation and dissemination of research results by publication in scientific journals.« less

Rapid Arctic Changes due to Infrastructure and Climate (RATIC) in the Russian North

NASA Astrophysics Data System (ADS)

Walker, D. A.; Kofinas, G.; Raynolds, M. K.; Kanevskiy, M. Z.; Shur, Y.; Ambrosius, K.; Matyshak, G. V.; Romanovsky, V. E.; Kumpula, T.; Forbes, B. C.; Khukmotov, A.; Leibman, M. O.; Khitun, O.; Lemay, M.; Allard, M.; Lamoureux, S. F.; Bell, T.; Forbes, D. L.; Vincent, W. F.; Kuznetsova, E.; Streletskiy, D. A.; Shiklomanov, N. I.; Fondahl, G.; Petrov, A.; Roy, L. P.; Schweitzer, P.; Buchhorn, M.

2015-12-01

The Rapid Arctic Transitions due to Infrastructure and Climate (RATIC) initiative is a forum developed by the International Arctic Science Committee (IASC) Terrestrial, Cryosphere, and Social & Human working groups for developing and sharing new ideas and methods to facilitate the best practices for assessing, responding to, and adaptively managing the cumulative effects of Arctic infrastructure and climate change. An IASC white paper summarizes the activities of two RATIC workshops at the Arctic Change 2014 Conference in Ottawa, Canada and the 2015 Third International Conference on Arctic Research Planning (ICARP III) meeting in Toyama, Japan (Walker & Pierce, ed. 2015). Here we present an overview of the recommendations from several key papers and posters presented at these conferences with a focus on oil and gas infrastructure in the Russian north and comparison with oil development infrastructure in Alaska. These analyses include: (1) the effects of gas- and oilfield activities on the landscapes and the Nenets indigenous reindeer herders of the Yamal Peninsula, Russia; (2) a study of urban infrastructure in the vicinity of Norilsk, Russia, (3) an analysis of the effects of pipeline-related soil warming on trace-gas fluxes in the vicinity of Nadym, Russia, (4) two Canadian initiatives that address multiple aspects of Arctic infrastructure called Arctic Development and Adaptation to Permafrost in Transition (ADAPT) and the ArcticNet Integrated Regional Impact Studies (IRIS), and (5) the effects of oilfield infrastructure on landscapes and permafrost in the Prudhoe Bay region, Alaska.

Development of Tools for the Rapid Assessment of Landslide Potential in Areas Exposed to Intense Storms, Earthquakes, and Other Triggering Mechanisms

NASA Astrophysics Data System (ADS)

Highland, Lynn

2014-05-01

Landslides frequently occur in connection with other types of hazardous phenomena such as earthquake or volcanic activity and intense rainstorms. Strong shaking, for example, often triggers extensive landslides in mountainous areas, which can then complicate response and compound socio-economic impacts over shaking losses alone. The U.S. Geological Survey (USGS) is exploring different ways to add secondary hazards to its Prompt Assessment of Global Earthquakes for Response (PAGER) system, which has been developed to deliver rapid earthquake impact and loss assessments following significant global earthquakes. The PAGER team found that about 22 percent of earthquakes with fatalities have deaths due to secondary causes, and the percentage of economic losses they incur has not been widely studied, but is probably significant. The current approach for rapid assessment and reporting of the potential and distribution of secondary earthquake-induced landslides involves empirical models that consider ground acceleration, slope, and rock-strength. A complementary situational awareness tool being developed is a region-specific landslide database for the U.S. The latter will be able to define, in a narrative form, the landslide types (debris flows, rock avalanches, shallow versus deep) that generally occur in each area, along with the type of soils, geology and meteorological effects that could have a bearing on soil saturation, and thus susceptibility. When a seismic event occurs in the U.S. and the PAGER system generates web-based earthquake information, these landslide narratives will simultaneously be made available, which will help in the assessment of the nature of landslides in that particular region. This landslide profile database could also be applied to landslide events that are not triggered by earthquake shaking, in conjunction with National Weather Service Alerts and other landslide/debris-flow alerting systems. Currently, prototypes are being developed for both the slope-based and the narrative assessment of landslide susceptibility and hazard.

Tropical fishes dominate temperate reef fish communities within western Japan.

PubMed

Nakamura, Yohei; Feary, David A; Kanda, Masaru; Yamaoka, Kosaku

2013-01-01

Climate change is resulting in rapid poleward shifts in the geographical distribution of tropical and subtropical fish species. We can expect that such range shifts are likely to be limited by species-specific resource requirements, with temperate rocky reefs potentially lacking a range of settlement substrates or specific dietary components important in structuring the settlement and success of tropical and subtropical fish species. We examined the importance of resource use in structuring the distribution patterns of range shifting tropical and subtropical fishes, comparing this with resident temperate fish species within western Japan (Tosa Bay); the abundance, diversity, size class, functional structure and latitudinal range of reef fishes utilizing both coral reef and adjacent rocky reef habitat were quantified over a 2 year period (2008-2010). This region has undergone rapid poleward expansion of reef-building corals in response to increasing coastal water temperatures, and forms one of the global hotspots for rapid coastal changes. Despite the temperate latitude surveyed (33°N, 133°E) the fish assemblage was both numerically, and in terms of richness, dominated by tropical fishes. Such tropical faunal dominance was apparent within both coral, and rocky reef habitats. The size structure of the assemblage suggested that a relatively large number of tropical species are overwintering within both coral and rocky habitats, with a subset of these species being potentially reproductively active. The relatively high abundance and richness of tropical species with obligate associations with live coral resources (i.e., obligate corallivores) shows that this region holds the most well developed temperate-located tropical fish fauna globally. We argue that future tropicalisation of the fish fauna in western Japan, associated with increasing coral habitat development and reported increasing shifts in coastal water temperatures, may have considerable positive economic impacts to the local tourism industry and bring qualitative changes to both local and regional fisheries resources.

Tropical Fishes Dominate Temperate Reef Fish Communities within Western Japan

PubMed Central

Nakamura, Yohei; Feary, David A.; Kanda, Masaru; Yamaoka, Kosaku

2013-01-01

Climate change is resulting in rapid poleward shifts in the geographical distribution of tropical and subtropical fish species. We can expect that such range shifts are likely to be limited by species-specific resource requirements, with temperate rocky reefs potentially lacking a range of settlement substrates or specific dietary components important in structuring the settlement and success of tropical and subtropical fish species. We examined the importance of resource use in structuring the distribution patterns of range shifting tropical and subtropical fishes, comparing this with resident temperate fish species within western Japan (Tosa Bay); the abundance, diversity, size class, functional structure and latitudinal range of reef fishes utilizing both coral reef and adjacent rocky reef habitat were quantified over a 2 year period (2008–2010). This region has undergone rapid poleward expansion of reef-building corals in response to increasing coastal water temperatures, and forms one of the global hotspots for rapid coastal changes. Despite the temperate latitude surveyed (33°N, 133°E) the fish assemblage was both numerically, and in terms of richness, dominated by tropical fishes. Such tropical faunal dominance was apparent within both coral, and rocky reef habitats. The size structure of the assemblage suggested that a relatively large number of tropical species are overwintering within both coral and rocky habitats, with a subset of these species being potentially reproductively active. The relatively high abundance and richness of tropical species with obligate associations with live coral resources (i.e., obligate corallivores) shows that this region holds the most well developed temperate-located tropical fish fauna globally. We argue that future tropicalisation of the fish fauna in western Japan, associated with increasing coral habitat development and reported increasing shifts in coastal water temperatures, may have considerable positive economic impacts to the local tourism industry and bring qualitative changes to both local and regional fisheries resources. PMID:24312528

Rapid extirpation of a North American frog coincides with an increase in fungal pathogen prevalence: Historical analysis and implications for reintroduction.

PubMed

Adams, Andrea J; Pessier, Allan P; Briggs, Cheryl J

2017-12-01

As extinctions continue across the globe, conservation biologists are turning to species reintroduction programs as one optimistic tool for addressing the biodiversity crisis. For repatriation to become a viable strategy, fundamental prerequisites include determining the causes of declines and assessing whether the causes persist in the environment. Invasive species-especially pathogens-are an increasingly significant factor contributing to biodiversity loss. We hypothesized that Batrachochytrium dendrobatidis (Bd), the causative agent of the deadly amphibian disease chytridiomycosis, was important in the rapid (<10 years) localized extirpation of a North American frog ( Rana boylii ) and that Bd remains widespread among extant amphibians in the region of extirpation. We used an interdisciplinary approach, combining interviews with herpetological experts, analysis of archived field notes and museum specimen collections, and field sampling of the extant amphibian assemblage to examine (1) historical relative abundance of R. boylii ; (2) potential causes of R. boylii declines; and (3) historical and contemporary prevalence of Bd. We found that R. boylii were relatively abundant prior to their rapid extirpation, and an increase in Bd prevalence coincided with R. boylii declines during a time of rapid change in the region, wherein backcountry recreation, urban development, and the amphibian pet trade were all on the rise. In addition, extreme flooding during the winter of 1969 coincided with localized extirpations in R. boylii populations observed by interview respondents. We conclude that Bd likely played an important role in the rapid extirpation of R. boylii from southern California and that multiple natural and anthropogenic factors may have worked in concert to make this possible in a relatively short period of time. This study emphasizes the importance of recognizing historical ecological contexts in making future management and reintroduction decisions.

Fatigue Crack Prognostics by Optical Quantification of Defect Frequency

NASA Astrophysics Data System (ADS)

Chan, K. S.; Buckner, B. D.; Earthman, J. C.

2018-01-01

Defect frequency, a fatigue crack prognostics indicator, is defined as the number of microcracks per second detected using a laser beam that is scanned across a surface at a constant predetermined frequency. In the present article, a mechanistic approach was taken to develop a methodology for deducing crack length and crack growth information from defect frequency data generated from laser scanning measurements made on fatigued surfaces. The method was developed by considering a defect frequency vs fatigue cycle curve that comprised three regions: (i) a crack initiation regime of rising defect frequency, (ii) a plateau region of a relatively constant defect frequency, and (iii) a region of rapid rising defect frequency due to crack growth. Relations between defect frequency and fatigue cycle were developed for each of these three regions and utilized to deduce crack depth information from laser scanning data of 7075-T6 notched specimens. The proposed method was validated using experimental data of crack density and crack length data from the literature for a structural steel. The proposed approach was successful in predicting the length or depth of small fatigue cracks in notched 7075-T6 specimens and in smooth fatigue specimens of a structural steel.

Development and Utilization of Regional Oceanic Modeling System (ROMS). Delicacy, Imprecision, and Uncertainty of Oceanic Simulations: An Investigation with the Regional Oceanic Modeling System (ROMS). Submesoscale Flows and Mixing in the Ocean Surface Layer Using the Regional Oceanic Modeling System (ROMS). Eddy Effects in General Circulation, Spanning Mean Currents, Mesoscale Eddies, and Topographic Generation, including Submesoscale Nests

DTIC Science & Technology

2012-09-30

unbalanced motions is likely to occur. Due to an rapidly expanding set of investigation on oceanic flows at submesoscales, it is increasingly clear...Uchiyama, E. M. Lane, J. M. Restrepo, & J. C. McWilliams, 2011: A vortex force analysis of the interaction of rip currents and gravity waves. J. Geophys...particular topographic features, the torque is pervasively positive (cyclonic) along the Stream, in opposition to the anticyclonic wind curl in the

Noninvasive monitoring of treatment response in a rabbit cyanide toxicity model reveals differences in brain and muscle metabolism

NASA Astrophysics Data System (ADS)

Kim, Jae G.; Lee, Jangwoen; Mahon, Sari B.; Mukai, David; Patterson, Steven E.; Boss, Gerry R.; Tromberg, Bruce J.; Brenner, Matthew

2012-10-01

Noninvasive near infrared spectroscopy measurements were performed to monitor cyanide (CN) poisoning and recovery in the brain region and in foreleg muscle simultaneously, and the effects of a novel CN antidote, sulfanegen sodium, on tissue hemoglobin oxygenation changes were compared using a sub-lethal rabbit model. The results demonstrated that the brain region is more susceptible to CN poisoning and slower in endogenous CN detoxification following exposure than peripheral muscles. However, sulfanegen sodium rapidly reversed CN toxicity, with brain region effects reversing more quickly than muscle. In vivo monitoring of multiple organs may provide important clinical information regarding the extent of CN toxicity and subsequent recovery, and facilitate antidote drug development.

Novel CAD/CAM rapid prototyping of next-generation biomedical devices

NASA Astrophysics Data System (ADS)

Doraiswamy, Anand

An aging population with growing healthcare needs demands multifaceted tools for diagnosis and treatment of health conditions. In the near-future, drug-administration devices, implantable devices/sensors, enhanced prosthesis, artificial and unique functional tissue constructs will become increasingly significant. Conventional technologies for mass-produced implants do not adequately take individual patient anatomy into consideration. Development of novel CAD/CAM rapid prototyping techniques may significantly accelerate progress of these devices for next-generation patient-care. In this dissertation, several novel rapid prototyping techniques have been introduced for next-generation biomedical applications. Two-photon polymerization was developed to microfabricate scaffolds for tissue engineering, microneedles for drug-delivery and ossicular replacement prostheses. Various photoplymers were evaluated for feasibility, mechanical properties, cytotoxicity, and surface properties. Laser direct write using MDW was utilized for developing microstructures of bioceramics such as hydroxyapatite, and viable mammalian osteosarcoma cells. CAD/CAM laser micromachining (CLM) was developed to engineer biointerfaces as surface recognition regions for differential adherence of cells and growth into tissue-like networks. CLM was also developed for engineering multi-cellular vascular networks. Cytotoxic evaluations and growth studies demonstrated VEGF-induced proliferation of HAAE-1 human aortic endothelial cells with inhibition of HA-VSMC human aortic smooth muscle cells. Finally, piiezoelectric inkjet printing was developed for controlled administration of natural and synthetic adhesives to overcome several problems associated with conventional tissue bonding materials, and greatly improve wound-repair in next generation eye repair, fracture fixation, organ fixation, wound closure, tissue engineering, and drug delivery devices.

Structural and Maturational Covariance in Early Childhood Brain Development.

PubMed

Geng, Xiujuan; Li, Gang; Lu, Zhaohua; Gao, Wei; Wang, Li; Shen, Dinggang; Zhu, Hongtu; Gilmore, John H

2017-03-01

Brain structural covariance networks (SCNs) composed of regions with correlated variation are altered in neuropsychiatric disease and change with age. Little is known about the development of SCNs in early childhood, a period of rapid cortical growth. We investigated the development of structural and maturational covariance networks, including default, dorsal attention, primary visual and sensorimotor networks in a longitudinal population of 118 children after birth to 2 years old and compared them with intrinsic functional connectivity networks. We found that structural covariance of all networks exhibit strong correlations mostly limited to their seed regions. By Age 2, default and dorsal attention structural networks are much less distributed compared with their functional maps. The maturational covariance maps, however, revealed significant couplings in rates of change between distributed regions, which partially recapitulate their functional networks. The structural and maturational covariance of the primary visual and sensorimotor networks shows similar patterns to the corresponding functional networks. Results indicate that functional networks are in place prior to structural networks, that correlated structural patterns in adult may arise in part from coordinated cortical maturation, and that regional co-activation in functional networks may guide and refine the maturation of SCNs over childhood development. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Anthropogenic activities and coastal environmental quality: a regional quantitative analysis in southeast China with management implications.

PubMed

Chen, Kai; Liu, Yan; Huang, Dongren; Ke, Hongwei; Chen, Huorong; Zhang, Songbin; Yang, Shengyun; Cai, Minggang

2018-02-01

Regional analysis of environmental issues has always been a hot topic in the field of sustainable development. Because the different levels of economic growth, urbanization, resource endowments, etc. in different regions generate apparently different ecological responses, a better description and comparison across different regions will provide more valuable implications for ecological improvement and policymaking. In this study, seven typical bays in southeast China that are a rapid developing area were selected to quantitatively analyze the relationship between socioeconomic development and coastal environmental quality. Based on the water quality data from 2007 to 2015, the multivariate statistical method was applied to analyze the potential environmental risks and to classify the seven bays based on their environmental quality status. The possible variation trends of environmental indices were predicted based on the cross-regional panel data by Environmental Kuznets Curve. The results showed that there were significant regional differences among the seven bays, especially Quanzhou, Xiamen, and Luoyuan Bays, suffered from severer artificial disturbances than other bays, despite their different development patterns. Socioeconomic development level was significantly associated with some water quality indices (pH, DIN, PO 4 -P); the association was roughly positive: the areas with higher GDP per capita have some worse water quality indices. In addition, the decreasing trend of pH values and the increasing trend of nutrient concentration in the seven bays will continue in the foreseeable future. In consideration of the variation trends, the limiting nutrient strategy should be implemented to mitigate the deterioration of the coastal environments.

SYBR green-based one step quantitative real-time polymerase chain reaction assay for the detection of Zika virus in field-caught mosquitoes.

PubMed

Tien, Wei-Ping; Lim, Gareth; Yeo, Gladys; Chiang, Suzanna Nicole; Chong, Chee-Seng; Ng, Lee-Ching; Hapuarachchi, Hapuarachchige Chanditha

2017-09-19

The monitoring of vectors is one of the key surveillance measures to assess the risk of arbovirus transmission and the success of control strategies in endemic regions. The recent re-emergence of Zika virus (ZIKV) in the tropics, including Singapore, emphasizes the need to develop cost-effective, rapid and accurate assays to monitor the virus spread by mosquitoes. As ZIKV infections largely remain asymptomatic, early detection of ZIKV in the field-caught mosquitoes enables timely implementation of appropriate mosquito control measures. We developed a rapid, sensitive and specific real-time reverse transcription polymerase chain reaction (rRT-PCR) assay for the detection of ZIKV in field-caught mosquitoes. The primers and PCR cycling conditions were optimized to minimize non-specific amplification due to cross-reactivity with the genomic material of Aedes aegypti, Aedes albopictus, Culex quinquefasciatus, Culex tritaeniorhynchus, Culex sitiens and Anopheles sinensis, as well as accompanying microbiota. The performance of the assay was further evaluated with a panel of flaviviruses and alphaviruses as well as in field-caught Ae. aegypti mosquitoes confirmed to be positive for ZIKV. As compared to a probe-based assay, the newly developed assay demonstrated 100% specificity and comparable detection sensitivity for ZIKV in mosquitoes. Being a SYBR Green-based method, the newly-developed assay is cost-effective and easy to adapt, thus is applicable to large-scale vector surveillance activities in endemic countries, including those with limited resources and expertise. The amplicon size (119 bp) also allows sequencing to confirm the virus type. The primers flank relatively conserved regions of ZIKV genome, so that, the assay is able to detect genetically diverse ZIKV strains. Our findings, therefore, testify the potential use of the newly-developed assay in vector surveillance programmes for ZIKV in endemic regions.

CRISPR-directed mitotic recombination enables genetic mapping without crosses.

PubMed

Sadhu, Meru J; Bloom, Joshua S; Day, Laura; Kruglyak, Leonid

2016-05-27

Linkage and association studies have mapped thousands of genomic regions that contribute to phenotypic variation, but narrowing these regions to the underlying causal genes and variants has proven much more challenging. Resolution of genetic mapping is limited by the recombination rate. We developed a method that uses CRISPR (clustered, regularly interspaced, short palindromic repeats) to build mapping panels with targeted recombination events. We tested the method by generating a panel with recombination events spaced along a yeast chromosome arm, mapping trait variation, and then targeting a high density of recombination events to the region of interest. Using this approach, we fine-mapped manganese sensitivity to a single polymorphism in the transporter Pmr1. Targeting recombination events to regions of interest allows us to rapidly and systematically identify causal variants underlying trait differences. Copyright © 2016, American Association for the Advancement of Science.

Dynamic Development of Regional Cortical Thickness and Surface Area in Early Childhood.

PubMed

Lyall, Amanda E; Shi, Feng; Geng, Xiujuan; Woolson, Sandra; Li, Gang; Wang, Li; Hamer, Robert M; Shen, Dinggang; Gilmore, John H

2015-08-01

Cortical thickness (CT) and surface area (SA) are altered in many neuropsychiatric disorders and are correlated with cognitive functioning. Little is known about how these components of cortical gray matter develop in the first years of life. We studied the longitudinal development of regional CT and SA expansion in healthy infants from birth to 2 years. CT and SA have distinct and heterogeneous patterns of development that are exceptionally dynamic; overall CT increases by an average of 36.1%, while cortical SA increases 114.6%. By age 2, CT is on average 97% of adult values, compared with SA, which is 69%. This suggests that early identification, prevention, and intervention strategies for neuropsychiatric illness need to be targeted to this period of rapid postnatal brain development, and that SA expansion is the principal driving factor in cortical volume after 2 years of age. © The Author 2014. Published by Oxford University Press. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Neural Changes Underlying the Development of Episodic Memory During Middle Childhood

PubMed Central

Ghetti, Simona; Bunge, Silvia A.

2012-01-01

Episodic memory is central to the human experience. In typically developing children, episodic memory improves rapidly during middle childhood. While the developmental cognitive neuroscience of episodic memory remains largely uncharted, recent research has begun to provide important insights. It has long been assumed that hippocampus-dependent binding mechanisms are in place by early childhood, and that improvements in episodic memory observed during middle childhood result from the protracted development of the prefrontal cortex. We revisit the notion that binding mechanisms are age-invariant, and propose that changes in the hippocampus and its projections to cortical regions also contribute to the development of episodic memory. We further review the role of developmental changes in lateral prefrontal and parietal cortices in this development. Finally, we discuss changes in white matter tracts connecting brain regions that are critical for episodic memory. Overall, we argue that changes in episodic memory emerge from the concerted effort of a network of relevant brain structures. PMID:22770728

Navigating Financial and Supply Reliability Tradeoffs in Regional Drought Portfolios

NASA Astrophysics Data System (ADS)

Zeff, H. B.; Herman, J. D.; Characklis, G. W.; Reed, P. M.

2013-12-01

Rising development costs and growing concerns over environmental impacts have led many communities to explore more diversified regional portfolio-type approaches to managing their water supplies. These strategies coordinate existing supply infrastructure with other ';assets' such as conservation measures or water transfers, reducing the capacity and costs required to meet demand by providing greater adaptability to changing hydrologic conditions. For many water utilities, however, this additional flexibility can also cause unexpected reductions in revenue (i.e. conservation) or increased costs (i.e. transfers), fluctuations that can be very difficult for a regulated entity to manage. Thus, despite the advantages, concerns over the resulting financial disruptions provide a disincentive for utilities to develop more adaptive methods, potentially limiting the role of some very effective tools. This study seeks to design portfolio strategies that employ financial instruments (e.g. contingency funds, index insurance) to reduce fluctuations in revenues and costs and therefore do not sacrifice financial stability for improved performance (e.g. lower expected costs, high reliability). This work describes the development of regional water supply portfolios in the ';Research Triangle' region of North Carolina, an area comprising four rapidly growing municipalities supplied by nine surface water reservoirs in two separate river basins. Disparities in growth rates and the respective individual storage capacities of the reservoirs provide the region with the opportunity to increase the efficiency of the regional supply infrastructure through inter-utility water transfers, even as each utility engages in its own conservation activities. The interdependence of multiple utilities navigating shared conveyance and treatment infrastructure to engage in transfers forces water managers to consider regional objectives, as the actions of any one utility can affect the others. Results indicate the inclusion of inter-utility water transfers allows the water utilities to improve on regional operational objectives (i.e. higher reliability and lower restriction frequencies) at a lower expected cost, while financial mitigation tools introduce a tradeoff between expected costs and cost variability. Financial mitigation schemes, including both third-party financial insurance contracts and contingency funds (i.e. self-insurance), were able to reduce cost variability at a lower expected cost than mitigation schemes which use self-insurance alone. The dynamics of the Research Triangle scenario (e.g. rapid population growth, constrained supply, and sensitivity to cost/revenue swings) suggest that this work may have the potential to more generally inform utilities on the effects of coordinated regional water supply planning and the resulting financial implications of more flexible, portfolio-type management techniques.

The change in capacity and service delivery at public and private hospitals in Turkey: A closer look at regional differences

PubMed Central

2010-01-01

Background Substantial regional health inequalities have been shown to exist in Turkey for major health indicators. Turkish data on hospitals deserves a closer examination with a special emphasis on the regional differences in the context of the rapid privatization of the secondary or tertiary level health services. This study aims to evaluate the change in capacity and service delivery at public and private hospitals in Turkey between 2001-2006 and to determine the regional differences. Methods Data for this retrospective study was provided from Statistical Almanacs of Inpatient Services (2001-2006). Hospitals in each of the 81 provinces were grouped into two categories: public and private. Provinces were grouped into six regions according to a development index composed by the State Planning Organisation. The number of facilities, hospital beds, outpatient admissions, inpatient admissions (per 100 000), number of deliveries and surgical operations (per 10 000) were calculated for public and private hospitals in each province and region. Regional comparisons were based on calculation of ratios for Region 1(R1) to Region 6(R6). Results Public facilities had a fundamental role in service delivery. However, private sector grew rapidly in Turkey between 2001-2006 in capacity and service delivery. In public sector, there were 2.3 fold increase in the number of beds in R1 to R6 in 2001. This ratio was 69.9 fold for private sector. The substantial regional inequalities in public and private sector decreased for the private sector enormously while a little decrease was observed for the public sector. In 2001 in R1, big surgical operations were performed six times more than R6 at the public sector whereas the difference was 117.7 fold for the same operations in the same regions for the private sector. These ratios decreased to 3.6 for the public sector and 13.9 for the private sector in 2006. Conclusions The private health sector has grown enormously between 2001-2006 in Turkey including the less developed regions of the country. Given the fact that majority of people living in these underdeveloped regions are uninsured, the expansion of the private sector may not contribute in reducing the inequalities in access to health care. In fact, it may widen the existing gap for access to health between high and low income earners in these underdeveloped regions. PMID:21040539

Spatiotemporal assessment and trade-offs of multiple ecosystem services based on land use changes in Zengcheng, China.

PubMed

Sun, Xiao; Li, Feng

2017-12-31

Driven by rapid urbanization, land use change has become a significant factor influencing ecosystem services (ESs). To support the decision-making process of city planners and policy makers, assessing the spatiotemporal changes associated with multiple ESs is vital. In this study, we developed a general structure to assess the changes of multiple ESs in Zengcheng, China. A new index also was developed to measure the comprehensive ecosystem service (CES). Trade-offs of various ESs were analyzed by using correlation analysis. We then designed four alternate scenarios to explore the optimal land use strategies to increase the CES value and minimize trade-offs among various ESs. Results demonstrated that rapid expansion of built-up land and traffic land resulted in a decrease of CES in Zengcheng from 2003 to 2013. Although the water supply, water purification, and vegetable and fruit production services increased, the climate regulation, soil conservation, biodiversity protection, recreation opportunity and grain production services decreased during the ten-year period. Government should implement land use policies and ecological engineering measures to improve soil conservation in the northern region; recreation opportunity in the central region; and carbon storage, water purification, biodiversity protection and recreation opportunity in the southern region. Among all alternative scenarios, woodland buffer and soil conservation scenarios exhibit the highest CES values, indicating that policies such as the "Ecological corridor construction" project and the "Grain for Green" project should be implemented. However, a caveat is that these policies improve the ESs at the expense of food production due to significant trade-off relationships. To minimize the trade-offs, a more sustainable intensification of agriculture should be adopted to increase food production without decreasing other ESs or occupying additional land. The land use strategies and ecological engineering measures in this study can provide a reliable reference for sustainable development of other urbanized regions in China. Copyright © 2017 Elsevier B.V. All rights reserved.

Developmental trajectories of the fronto-temporal lobes from infancy to early adulthood in healthy individuals.

PubMed

Tanaka, Chiaki; Matsui, Mie; Uematsu, Akiko; Noguchi, Kyo; Miyawaki, Toshio

2012-01-01

Brain development during early life in healthy individuals is rapid and dynamic, indicating that this period plays a very important role in neural and functional development. The frontal and temporal lobes are known to play a particularly important role in cognition. The study of healthy frontal and temporal lobe development in children is therefore of considerable importance. A better understanding of how these brain regions develop could also aid in the diagnosis and treatment of neurodevelopmental disorders. Some developmental studies have used magnetic resonance imaging (MRI) to examine infant brains, but it remains the case that relatively little is known about cortical brain development in the first few years of life. In the present study we examined whole brain, temporal lobe and frontal lobe developmental trajectories from infancy to early adulthood in healthy individuals, considering gender and brain hemisphere differences. We performed a cross-sectional, longitudinal morphometric MRI study of 114 healthy individuals (54 females and 60 males) aged 1 month to 25 years old (mean age ± SD 8.8 ± 6.9). We measured whole brain, temporal and frontal lobe gray matter (GM)/white matter (WM) volumes, following previously used protocols. There were significant non-linear age-related volume changes in all regions. Peak ages of whole brain, temporal lobe and frontal lobe development occurred around pre-adolescence (9-12 years old). GM volumes for all regions increased significantly as a function of age. Peak age was nevertheless lobe specific, with a pattern of earlier peak ages for females in both temporal and frontal lobes. Growth change in whole brain GM volume was larger in males than in females. However, GM volume growth changes for the temporal and frontal lobes showed a somewhat different pattern. GM volume for both temporal and frontal lobes showed a greater increase in females until around 5-6 years old, at which point this tendency reversed (GM volume changes in males became greater), with male GM volume increasing for a longer time than that of females. WM volume growth changes were similar across regions, all increasing rapidly until early childhood but slowing down thereafter. All regions displayed significant rightward volumetric asymmetry regardless of sex. Furthermore, the right temporal and frontal lobes showed a greater volumetric increase than the left for the first several years, with this tendency reversing at around 6 years of age. In addition, the left frontal and temporal lobes increased in volume for a longer period of time. Taken together, these findings indicated that brain developmental trajectories differ depending on brain region, sex and brain hemisphere. Gender-related factors such as sex hormones and functional laterality may affect brain development. Copyright © 2012 S. Karger AG, Basel.

Hyperspectral reflectance and fluorescence line-scan imaging system for online detection of fecal contamination on apples

NASA Astrophysics Data System (ADS)

Kim, Moon S.; Cho, Byoung-Kwan; Yang, Chun-Chieh; Chao, Kaunglin; Lefcourt, Alan M.; Chen, Yud-Ren

2006-10-01

We have developed nondestructive opto-electronic imaging techniques for rapid assessment of safety and wholesomeness of foods. A recently developed fast hyperspectral line-scan imaging system integrated with a commercial apple-sorting machine was evaluated for rapid detection of animal feces matter on apples. Apples obtained from a local orchard were artificially contaminated with cow feces. For the online trial, hyperspectral images with 60 spectral channels, reflectance in the visible to near infrared regions and fluorescence emissions with UV-A excitation, were acquired from apples moving at a processing sorting-line speed of three apples per second. Reflectance and fluorescence imaging required a passive light source, and each method used independent continuous wave (CW) light sources. In this paper, integration of the hyperspectral imaging system with the commercial applesorting machine and preliminary results for detection of fecal contamination on apples, mainly based on the fluorescence method, are presented.

Balancing the need to rapidly scale-up and improve clinical outcomes in antiretroviral programmes in developing countries: lessons from an Indian programmatic cohort study.

PubMed

Bock, Peter; Beyers, Nulda; Fidler, Sarah

2014-10-01

Antiretroviral treatment (ART) is highly effective reducing mortality and AIDS-related morbidity in HIV-infected people and at preventing transmission of HIV between individuals. The article reviewed for this commentary reported on data from an Indian ART cohort that showed low median baseline CD4 counts and high rates of mortality and loss to follow-up. Programme implementers in developing regions need to balance the need for rapid scale-up and simultaneous improvement in clinical outcomes. Challenges outlined support HIV treatment strategies that combine improved HIV diagnosis, linkage to care and provision of ART with a strong community-based component. © The Author 2014. Published by Oxford University Press on behalf of Royal Society of Tropical Medicine and Hygiene. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Development of a PCR-based assay for rapid and reliable identification of pathogenic Fusaria.

PubMed

Mishra, Prashant K; Fox, Roland T V; Culham, Alastair

2003-01-28

Identification of Fusarium species has always been difficult due to confusing phenotypic classification systems. We have developed a fluorescent-based polymerase chain reaction assay that allows for rapid and reliable identification of five toxigenic and pathogenic Fusarium species. The species includes Fusarium avenaceum, F. culmorum, F. equiseti, F. oxysporum and F. sambucinum. The method is based on the PCR amplification of species-specific DNA fragments using fluorescent oligonucleotide primers, which were designed based on sequence divergence within the internal transcribed spacer region of nuclear ribosomal DNA. Besides providing an accurate, reliable, and quick diagnosis of these Fusaria, another advantage with this method is that it reduces the potential for exposure to carcinogenic chemicals as it substitutes the use of fluorescent dyes in place of ethidium bromide. Apart from its multidisciplinary importance and usefulness, it also obviates the need for gel electrophoresis.

Decision Making For Sustainable Futures In A Rapidly Changing Arctic

NASA Astrophysics Data System (ADS)

Chabay, I.

2016-12-01

Observing, understanding, and predicting effects of rapid climate change in the Arctic are crucial as the circumpolar region becomes more accessible and demand grows for commercial development and resource extraction. Climate change effects - including changes in ocean ice coverage, Arctic weather patterns, permafrost conditions, and coastal erosion - are a consequence of fossil fuel use outside the Arctic, while at the same time the changes open greater access to the Arctic's rich resources, including oil and gas. This offers new opportunities for livelihoods and development of Arctic communities, but inevitably also introduces substantially increased environmental, social, and economic risks. I will outline the rationale for and the process of our transdisciplinary project in engaging with a wide range of actors in the Arctic and beyond. The purpose of the project is to support informed and effective decision making for sustainable futures that is contextually appropriate through co-design and co-production of knowledge with rights-holders and stakeholders.

Rapid Identification and Differentiation of Trichophyton Species, Based on Sequence Polymorphisms of the Ribosomal Internal Transcribed Spacer Regions, by Rolling-Circle Amplification▿

PubMed Central

Kong, Fanrong; Tong, Zhongsheng; Chen, Xiaoyou; Sorrell, Tania; Wang, Bin; Wu, Qixuan; Ellis, David; Chen, Sharon

2008-01-01

DNA sequencing analyses have demonstrated relatively limited polymorphisms within the fungal internal transcribed spacer (ITS) regions among Trichophyton spp. We sequenced the ITS region (ITS1, 5.8S, and ITS2) for 42 dermatophytes belonging to seven species (Trichophyton rubrum, T. mentagrophytes, T. soudanense, T. tonsurans, Epidermophyton floccosum, Microsporum canis, and M. gypseum) and developed a novel padlock probe and rolling-circle amplification (RCA)-based method for identification of single nucleotide polymorphisms (SNPs) that could be exploited to differentiate between Trichophyton spp. Sequencing results demonstrated intraspecies genetic variation for T. tonsurans, T. mentagrophytes, and T. soudanense but not T. rubrum. Signature sets of SNPs between T. rubrum and T. soudanense (4-bp difference) and T. violaceum and T. soudanense (3-bp difference) were identified. The RCA assay correctly identified five Trichophyton species. Although the use of two “group-specific” probes targeting both the ITS1 and the ITS2 regions were required to identify T. soudanense, the other species were identified by single ITS1- or ITS2-targeted species-specific probes. There was good agreement between ITS sequencing and the RCA assay. Despite limited genetic variation between Trichophyton spp., the sensitive, specific RCA-based SNP detection assay showed potential as a simple, reproducible method for the rapid (2-h) identification of Trichophyton spp. PMID:18234865

A complex relationship between calving glaciers and climate

USGS Publications Warehouse

Post, A.; O'Neel, S.; Motyka, R.J.; Streveler, G.

2011-01-01

Many terrestrial glaciers are sensitive indicators of past and present climate change as atmospheric temperature and snowfall modulate glacier volume. However, climate interpretations based on glacier behavior require careful selection of representative glaciers, as was recently pointed out for surging and debris-covered glaciers, whose behavior often defies regional glacier response to climate [Yde and Paasche, 2010]. Tidewater calving glaciers (TWGs)mountain glaciers whose termini reach the sea and are generally grounded on the seaflooralso fall into the category of non-representative glaciers because the regional-scale asynchronous behavior of these glaciers clouds their complex relationship with climate. TWGs span the globe; they can be found both fringing ice sheets and in high-latitude regions of each hemisphere. TWGs are known to exhibit cyclic behavior, characterized by slow advance and rapid, unstable retreat, largely independent of short-term climate forcing. This so-called TWG cycle, first described by Post [1975], provides a solid foundation upon which modern investigations of TWG stability are built. Scientific understanding has developed rapidly as a result of the initial recognition of their asynchronous cyclicity, rendering greater insight into the hierarchy of processes controlling regional behavior. This has improved the descriptions of the strong dynamic feedbacks present during retreat, the role of the ocean in TWG dynamics, and the similarities and differences between TWG and ice sheet outlet glaciers that can often support floating tongues.

Select antibiotics in leachate from closed and active landfills exceed thresholds for antibiotic resistance development.

PubMed

Chung, S S; Zheng, J S; Burket, S R; Brooks, B W

2018-06-01

Though antibiotic resistance (ABR) represents a major global health threat, contributions of landfill leachate to the life cycle of antibiotics and ABR development are poorly understood in rapidly urbanizing regions of developing countries. We selected one of the largest active landfills in Asia and two landfills that have been closed for 20 years to examine antibiotic occurrences in leachates and associated hazards during wet and dry season sampling events. We focused on some of the most commonly used human antibiotics in Hong Kong, one of the most populous Asian cities and the fourth most densely populated cities in the world. Seven antibiotics (cephalexin [CLX], chloramphenicol [CAP], ciprofloxacin [CIP], erythromycin [ERY], roxithromycin [ROX], trimethoprim [TMP], sulfamethoxazole [SMX]) were quantitated using HPLC-MS/MS generally following previously reported methods. Whereas CLX, CAP, ROX and SMX in leachates did not exceed ABR predicted no effect concentrations (PNECs), exceedances were observed for CIP, ERY and TMP in some study locations and on some dates. In fact, an ABR PNEC for CIP was exceeded in leachates during both sampling periods from all study locations, including leachates that are directly discharged to coastal systems. These findings highlight the importance of developing an advanced understanding of pharmaceutical access, usage and disposal practices, effectiveness of intervention strategies (e.g., leachate treatment technologies, drug take-back schemes), and contributions of landfill leachates to the life cycle of antibiotics and ABR development, particularly in rapidly urbanizing coastal regions with less advanced waste management systems than Hong Kong. Copyright © 2018 Elsevier Ltd. All rights reserved.

The Regional Integrated Sciences and Assessments (RISA) Program, Climate Services, and Meeting the National Climate Change Adaptation Challenge

NASA Astrophysics Data System (ADS)

Overpeck, J. T.; Udall, B.; Miles, E.; Dow, K.; Anderson, C.; Cayan, D.; Dettinger, M.; Hartmann, H.; Jones, J.; Mote, P.; Ray, A.; Shafer, M.; White, D.

2008-12-01

The NOAA-led RISA Program has grown steadily to nine regions and a focus that includes both natural climate variability and human-driven climate change. The RISAs are, at their core, university-based and heavily invested in partnerships, particularly with stakeholders, NOAA, and other federal agencies. RISA research, assessment and partnerships have led to new operational climate services within NOAA and other agencies, and have become important foundations in the development of local, state and regional climate change adaptation initiatives. The RISA experience indicates that a national climate service is needed, and must include: (1) services prioritized based on stakeholder needs; (2) sustained, ongoing regional interactions with users, (3) a commitment to improve climate literacy; (4) support for assessment as an ongoing, iterative process; (5) full recognition that stakeholder decisions are seldom made using climate information alone; (6) strong interagency partnership; (7) national implementation and regional in focus; (8) capability spanning local, state, tribal, regional, national and international space scales, and weeks to millennia time scales; and (9) institutional design and scientific support flexible enough to assure the effort is nimble enough to respond to rapidly-changing stakeholder needs. The RISA experience also highlights the central role that universities must play in national climate change adaptation programs. Universities have a tradition of trusted regional stakeholder partnerships, as well as the interdisciplinary expertise - including social science, ecosystem science, law, and economics - required to meet stakeholder climate-related needs; project workforce can also shift rapidly in universities. Universities have a proven ability to build and sustain interagency partnerships. Universities excel in most forms of education and training. And universities often have proven entrepreneurship, technology transfer and private sector partnership capability.

Cross-scale assessment of potential habitat shifts in a rapidly changing climate

USGS Publications Warehouse

Jarnevich, Catherine S.; Holcombe, Tracy R.; Bella, Elizabeth S.; Carlson, Matthew L.; Graziano, Gino; Lamb, Melinda; Seefeldt, Steven S.; Morisette, Jeffrey T.

2014-01-01

We assessed the ability of climatic, environmental, and anthropogenic variables to predict areas of high-risk for plant invasion and consider the relative importance and contribution of these predictor variables by considering two spatial scales in a region of rapidly changing climate. We created predictive distribution models, using Maxent, for three highly invasive plant species (Canada thistle, white sweetclover, and reed canarygrass) in Alaska at both a regional scale and a local scale. Regional scale models encompassed southern coastal Alaska and were developed from topographic and climatic data at a 2 km (1.2 mi) spatial resolution. Models were applied to future climate (2030). Local scale models were spatially nested within the regional area; these models incorporated physiographic and anthropogenic variables at a 30 m (98.4 ft) resolution. Regional and local models performed well (AUC values > 0.7), with the exception of one species at each spatial scale. Regional models predict an increase in area of suitable habitat for all species by 2030 with a general shift to higher elevation areas; however, the distribution of each species was driven by different climate and topographical variables. In contrast local models indicate that distance to right-of-ways and elevation are associated with habitat suitability for all three species at this spatial level. Combining results from regional models, capturing long-term distribution, and local models, capturing near-term establishment and distribution, offers a new and effective tool for highlighting at-risk areas and provides insight on how variables acting at different scales contribute to suitability predictions. The combinations also provides easy comparison, highlighting agreement between the two scales, where long-term distribution factors predict suitability while near-term do not and vice versa.

Water professionals and water policy in the Black Hills region

USGS Publications Warehouse

Fontaine, T.A.; Driscoll, D.G.; Erickson, J.W.; Kenner, S.J.; Sawyer, J.F.; Kendy, Eloise

1999-01-01

A case study approach based on examples from the Black Hills region is used to evaluate the role of water professionals in developing feasible and fair public policy involving water resources. Examples presented include a long-term hydrologic investigation in the Black Hills, a local wellhead protection program, issues being addressed by a local flood management commission, coordination of definitions of beneficial stream uses by two state agencies, water-quality problems related to rapid population increase in a rural area, and impacts of potential climate change on water resources. In some of these examples, the hydrologic work was separated from policy making to ensure neutrality. In other examples, involvement of the hydrologists and water resource engineers directly benefited policy development. Opportunities for increased effectiveness were observed in most of the examples.

Amyotrophic Lateral Sclerosis Regional Variants (Brachial Amyotrophic Diplegia, Leg Amyotrophic Diplegia, and Isolated Bulbar Amyotrophic Lateral Sclerosis).

PubMed

Jawdat, Omar; Statland, Jeffrey M; Barohn, Richard J; Katz, Jonathan S; Dimachkie, Mazen M

2015-11-01

Amyotrophic lateral sclerosis (ALS), a rapidly progressive, invariably fatal disease, involves mixed upper and lower motor neurons in different spinal cord regions. Patients with bulbar onset progress more rapidly than patients with limb onset or with a lower motor neuron presentation. Recent descriptions of regional variants suggest some patients have ALS isolated to a single spinal region for many years, including brachial amyotrophic diplegia, leg amyotrophic diplegia, and isolated bulbar palsy. Clearer definitions of regional variants will have implications for prognosis, understanding the pathophysiology of ALS, identifying genetic factors related to slower disease progression, and future planning of clinical trials. Copyright © 2015 Elsevier Inc. All rights reserved.

Feasibility study of a swept frequency electromagnetic probe (SWEEP) using inductive coupling for the determination of subsurface conductivity of the earth and water prospecting in arid regions

NASA Technical Reports Server (NTRS)

Latorraca, G. A.; Bannister, L. H.

1974-01-01

Techniques developed for electromagnetic probing of the lunar interior, and techniques developed for the generation of high power audio frequencies were combined to make practical a magnetic inductive coupling system for the rapid measurement of ground conductivity profiles which are helpful when prospecting for the presence and quality of subsurface water. A system which involves the measurement of the direction, intensity, and time phase of the magnetic field observed near the surface of the earth at a distance from a horizontal coil energized so as to create a field that penetrates the earth was designed and studied to deduce the conductivity and stratification of the subsurface. Theoretical studies and a rudimentary experiment in an arid region showed that the approach is conceptually valid and that this geophysical prospecting technique can be developed for the economical exploration of subterranean water resources.

Geohazards and myths: ancient memories of rapid coastal change in the Asia-Pacific region and their value to future adaptation

NASA Astrophysics Data System (ADS)

Nunn, Patrick D.

2014-12-01

Rapid coastal change is common in the Asia-Pacific region yet an understanding of its causes, recurrence times, and impacts is not always clear through the use of conventional geological methods. It is suggested that myths (traditional [oral] tales) are underutilized sources of information about coastal change in this region. This is illustrated by consideration of myths likely to recall (early) Holocene sea-level rise, particularly along the coasts of India and Australia, as well as myths recalling rapid episodic coastal emergence and submergence, the latter including the disappearance of entire landmasses (islands). Two examples of how details in such myths can inform geological understanding of coastal change are given. The first argues that myths recalling the rapid flooding of coastal cities/lowlands are likely to represent memories of extreme wave events superimposed on a rising (postglacial) sea level. The second suggests that many myths about landmass/island disappearance fail to report the occurrence of rapid (coseismic and aseismic) subsidence even though they provide inferential evidence that this occurred. Few such myths are known to the author from many parts of Asia yet it is likely they exist and could, as elsewhere in the world, help illuminate the understanding of the nature and chronology of rapid coastal change. The challenges involved in helping communities in the Asia-Pacific region adapt to future coastal changes might be partly overcome by the use of appropriate myths to demonstrate precedents and engender local participation in adaptation strategies.

Flight evaluation of a simple total energy-rate system with potential wind-shear application

NASA Technical Reports Server (NTRS)

Ostroff, A. J.; Hueschen, R. M.; Hellbaum, R. F.; Creedon, J. F.

1981-01-01

Wind shears can create havoc during aircraft terminal area operations and have been cited as the primary cause of several major aircraft accidents. A simple sensor, potentially having application to the wind-shear problem, was developed to rapidly measure aircraft total energy relative to the air mass. Combining this sensor with either a variometer or a rate-of-climb indicator provides a total energy-rate system which was successfully applied in soaring flight. The measured rate of change of aircraft energy can potentially be used on display/control systems of powered aircraft to reduce glide-slope deviations caused by wind shear. The experimental flight configuration and evaluations of the energy-rate system are described. Two mathematical models are developed: the first describes operation of the energy probe in a linear design region and the second model is for the nonlinear region. The calculated total rate is compared with measured signals for many different flight tests. Time history plots show the tow curves to be almost the same for the linear operating region and very close for the nonlinear region.

Health promotion in South East Asia.

PubMed

Mir, N S

1998-01-01

The countries of the South East Asia region, which includes Bangladesh, Bhutan, Pakistan, Korea, India, Indonesia, Maldives, Myanmar, Nepal, Sri Lanka, and Thailand, have undertaken a variety of strategies to address the health challenges in the region. The ever-growing pressure of population in the region has allowed rapid transmission of communicable diseases like malaria, tuberculosis (TB), leprosy, and HIV/AIDS. One of the innovative community-based health initiatives in response to this problem is Indonesia's Primary Health Care Project. This project aimed to develop a sustainable health infrastructure by training medical staff, coordinators, village cadres, midwives and those working for TB programs; provision of ongoing guidance and education in this area; and provision of medicines and funds. The project has pioneered a process towards positive changes. Another strategy is the collaboration of youth groups, island development committees, and health workers in Maldives which has led to the declaration of two islands (Madifushi and Haa Alif Berinmadhoo) as 'no smoking' islands. In addition, Sarvodaya has successfully developed a methodology to involve Buddhist monks in AIDS prevention and control through "the Buddhist approach to AIDS prevention in Sri Lanka."

Automated Means of Identifying Landslide Deposits using LiDAR Data using the Contour Connection Method Algorithm

NASA Astrophysics Data System (ADS)

Olsen, M. J.; Leshchinsky, B. A.; Tanyu, B. F.

2014-12-01

Landslides are a global natural hazard, resulting in severe economic, environmental and social impacts every year. Often, landslides occur in areas of repeated slope instability, but despite these trends, significant residential developments and critical infrastructure are built in the shadow of past landslide deposits and marginally stable slopes. These hazards, despite their sometimes enormous scale and regional propensity, however, are difficult to detect on the ground, often due to vegetative cover. However, new developments in remote sensing technology, specifically Light Detection and Ranging mapping (LiDAR) are providing a new means of viewing our landscape. Airborne LiDAR, combined with a level of post-processing, enable the creation of spatial data representative of the earth beneath the vegetation, highlighting the scars of unstable slopes of the past. This tool presents a revolutionary technique to mapping landslide deposits and their associated regions of risk; yet, their inventorying is often done manually, an approach that can be tedious, time-consuming and subjective. However, the associated LiDAR bare earth data present the opportunity to use this remote sensing technology and typical landslide geometry to create an automated algorithm that can detect and inventory deposits on a landscape scale. This algorithm, called the Contour Connection Method (CCM), functions by first detecting steep gradients, often associated with the headscarp of a failed hillslope, and initiating a search, highlighting deposits downslope of the failure. Based on input of search gradients, CCM can assist in highlighting regions identified as landslides consistently on a landscape scale, capable of mapping more than 14,000 hectares rapidly (<30 minutes). CCM has shown preliminary agreement with manual landslide inventorying in Oregon's Coast Range, realizing almost 90% agreement with inventorying performed by a trained geologist. The global threat of landslides necessitates new and effective tools for inventorying regions of risk to protect people, infrastructure and the environment from landslide hazards. Use of the CCM algorithm combined with judgment and rapidly developing remote sensing technology may help better define these regions of risk.

Probing the Boundaries of Orthology: The Unanticipated Rapid Evolution of Drosophila centrosomin

PubMed Central

Eisman, Robert C.; Kaufman, Thomas C.

2013-01-01

The rapid evolution of essential developmental genes and their protein products is both intriguing and problematic. The rapid evolution of gene products with simple protein folds and a lack of well-characterized functional domains typically result in a low discovery rate of orthologous genes. Additionally, in the absence of orthologs it is difficult to study the processes and mechanisms underlying rapid evolution. In this study, we have investigated the rapid evolution of centrosomin (cnn), an essential gene encoding centrosomal protein isoforms required during syncytial development in Drosophila melanogaster. Until recently the rapid divergence of cnn made identification of orthologs difficult and questionable because Cnn violates many of the assumptions underlying models for protein evolution. To overcome these limitations, we have identified a group of insect orthologs and present conserved features likely to be required for the functions attributed to cnn in D. melanogaster. We also show that the rapid divergence of Cnn isoforms is apparently due to frequent coding sequence indels and an accelerated rate of intronic additions and eliminations. These changes appear to be buffered by multi-exon and multi-reading frame maximum potential ORFs, simple protein folds, and the splicing machinery. These buffering features also occur in other genes in Drosophila and may help prevent potentially deleterious mutations due to indels in genes with large coding exons and exon-dense regions separated by small introns. This work promises to be useful for future investigations of cnn and potentially other rapidly evolving genes and proteins. PMID:23749319

Balancing conservation management and tourism development with wilderness stewardship in the Kruger National Park, South Africa

Treesearch

F. J. (Freek) Venter

2007-01-01

The Kruger National Park (KNP) faces greatly amplified problems than was the case in the early 1900s when the KNP was established. Areas surrounding the park have experienced a human population explosion with a rapid expansion of farming areas and rural settlements. In the 1970s the KNP was fenced. Ecologically the KNP became an island and previous regional animal...

Relationship between atmospheric stability and area burned during the 1998 Florida wildfires

Treesearch

Scott L. Goodrick

2003-01-01

During the spring and early summer of 1998, over 2,200 wildfires scorched nearly a half million acres of Florida. Many of these fires rapidly grew to large sizes and threatened and/or damaged private homes (126 were lost). During this period, a strong ridge of high pressure developed over the region and persisted from late April through the first week of July. High...

The human factor in mining reclamation

USGS Publications Warehouse

Arbogast, Belinda F.; Knepper, Daniel H.; Langer, William H.

2000-01-01

Rapid urbanization of the landscape results in less space available for wildlife habitat, agriculture, and recreation. Mineral resources (especially nonmetallic construction materials) become unrecoverable due to inaccessibility caused by development. This report both describes mine sites with serious problems and draws attention to thoughtful reclamation projects for better future management. It presents information from selected sites in terms of their history, landform, design approach, and visual discernment. Examples from Colorado are included to introduce the broader issue of regions soundly developing mining sites, permitting the best utilization of natural resources, and respecting the landscape.

Nanomedicine in GI

PubMed Central

Laroui, Hamed; Wilson, David S.; Dalmasso, Guillaume; Salaita, Khalid; Murthy, Niren; Sitaraman, Shanthi V.

2011-01-01

Recent advances in nanotechnology offer new hope for disease detection, prevention, and treatment. Nanomedicine is a rapidly evolving field wherein targeted therapeutic approaches using nanotechnology based on the pathophysiology of gastrointestinal diseases are being developed. Nanoparticle vectors capable of delivering drugs specifically and exclusively to regions of the gastrointestinal tract affected by disease for a prolonged period of time are likely to significantly reduce the side effects of existing otherwise effective treatments. This review aims at integrating various applications of the most recently developed nanomaterials that have tremendous potential for the detection and treatment of gastrointestinal diseases. PMID:21148398

A recombinase polymerase amplification assay for rapid detection of Crimean-Congo Haemorrhagic fever Virus infection.

PubMed

Bonney, Laura C; Watson, Robert J; Afrough, Babak; Mullojonova, Manija; Dzhuraeva, Viktoriya; Tishkova, Farida; Hewson, Roger

2017-10-01

Crimean-Congo Haemorrhagic fever Virus (CCHFV) is a rapidly emerging vector-borne pathogen and the cause of a virulent haemorrhagic fever affecting large parts of Europe, Africa, the Middle East and Asia. An isothermal recombinase polymerase amplification (RPA) assay was successfully developed for molecular detection of CCHFV. The assay showed rapid (under 10 minutes) detection of viral extracts/synthetic virus RNA of all 7 S-segment clades of CCHFV, with high target specificity. The assay was shown to tolerate the presence of inhibitors in crude preparations of mock field samples, indicating that this assay may be suitable for use in the field with minimal sample preparation. The CCHFV RPA was successfully used to screen and detect CCHFV positives from a panel of clinical samples from Tajikistan. The assay is a rapid, isothermal, simple-to-perform molecular diagnostic, which can be performed on a light, portable real-time detection device. It is ideally placed therefore for use as a field-diagnostic or in-low resource laboratories, for monitoring of CCHF outbreaks at the point-of-need, such as in remote rural regions in affected countries.

Kinematics of current region fragmentation in semi-inclusive deeply inelastic scattering

DOE PAGES

Boglione, M.; Collins, J.; Gamberg, L.; ...

2017-01-16

Different kinematical regions of semi-inclusive deeply inelastic scattering (SIDIS) processes correspond to different underlying partonic pictures, and it is important to understand the transition between them. We find criteria in semi-inclusive deeply inelastic scattering (SIDIS) for identifying the current fragmentation region — the kinematical region where a factorization picture with fragmentation functions is appropriate, especially for studies of transverse-momentum-dependent (TMD) functions. This region is distinguished from the central (soft) and target fragmentation regions. The basis of our argument is in the errors in approximations used in deriving factorization. As compared with previous work, we show that it is essential tomore » take account of the transverse momentum of the detected hadron, and we find a much more restricted range for genuine current fragmentation. As a result, we show that it is important to develop an extended factorization formulation to treat hadronization in the central region, as well as the current and target fragmentation regions, and to obtain a unified formalism spanning all rapidities for the detected hadron.« less

Synaptic Inputs Compete during Rapid Formation of the Calyx of Held: A New Model System for Neural Development

PubMed Central

Holcomb, Paul S.; Hoffpauir, Brian K.; Hoyson, Mitchell C.; Jackson, Dakota R.; Deerinck, Thomas J.; Marrs, Glenn S.; Dehoff, Marlin; Wu, Jonathan; Ellisman, Mark H.

2013-01-01

Hallmark features of neural circuit development include early exuberant innervation followed by competition and pruning to mature innervation topography. Several neural systems, including the neuromuscular junction and climbing fiber innervation of Purkinje cells, are models to study neural development in part because they establish a recognizable endpoint of monoinnervation of their targets and because the presynaptic terminals are large and easily monitored. We demonstrate here that calyx of Held (CH) innervation of its target, which forms a key element of auditory brainstem binaural circuitry, exhibits all of these characteristics. To investigate CH development, we made the first application of serial block-face scanning electron microscopy to neural development with fine temporal resolution and thereby accomplished the first time series for 3D ultrastructural analysis of neural circuit formation. This approach revealed a growth spurt of added apposed surface area (ASA) >200 μm2/d centered on a single age at postnatal day 3 in mice and an initial rapid phase of growth and competition that resolved to monoinnervation in two-thirds of cells within 3 d. This rapid growth occurred in parallel with an increase in action potential threshold, which may mediate selection of the strongest input as the winning competitor. ASAs of competing inputs were segregated on the cell body surface. These data suggest mechanisms to select “winning” inputs by regional reinforcement of postsynaptic membrane to mediate size and strength of competing synaptic inputs. PMID:23926251

The Benefits and Challenges of Having AN Open and Free Basis Satellite Data Sharing Platform in Turkey: GEZGİN

NASA Astrophysics Data System (ADS)

Seda Deveci, Hüsne; Koru, Aziz; Sakarya, Ufuk; Tevrizoğlu, İsmail; Teke, Mustafa; Küpçü, Ramazan; Avenoğlu, Bülent; Demirkesen, Can; Zübeyde Gürbüz, Sevgi; Feray Öztoprak, A.; Açıkgöz, İbrahim Serdar; Hakkı Demirhan, İsmail; Ömer Kozal, Ali; Efendioğlu, Mehmet; Berke, Erdinç; Fehmi Şimşek, F.; Atıl, İlkay; Kaya, Derya; Uçmak, Pınar; Ersöz, Eda; Özen, Hilal

2016-06-01

Turkey is a county that experiences rapid socioeconomic development, which, in turn, leads to high urbanization rates due to migration of people from rural to urban areas, many large-scale development projects (e.g. highways, dams, housing and infrastructure), and environmental problems that adversely affect agriculture, such as soil erosion and deforestation. Furthermore, Turkey lies in a region prone to natural disasters, especially earthquakes, landslides, flooding and forest fires. Successfully overcoming these challenges requires continuous monitoring to enable rapid response as well as the development of effective socioeconomic policies. In this regard, space-based earth observation (EO) systems play a critical role in the rapid acquisiton and extraction of crucial information. The first launch of the first Turkish-designed satellite, RASAT, in 2011 led to the wide-spread exploitation of space-based resources by Turkish institutions through the dissemination of EO data on an open and free basis via the GEZGIN internet portal (http://www.gezgin.gov.tr). The push for data sharing was further instigated by the nationally funded project GEOPORTAL ("Satellite Image Processing and Geoportal Development Project") and European Union FP7 project EOPOWER ("Earth Observation for Economic Empowerment"), which strove to create conditions for sustainable economic development through the increased use of Earth observation products and services for environmental applications. In this work, the technical challenges involving processing and preparing raw satellite data for dissemination as well as software design of the GEZGIN Portal will be presented.

Triangulating the Sociohydrology of Water Supply, Quality and Forests in the Triangle

NASA Astrophysics Data System (ADS)

Band, L. E.

2016-12-01

The North Carolina Research Triangle is among the most rapidly growing metropolitan areas in the United States, with decentralized governance split among several different municipalities, counties and water utilities. Historically smaller populations, plentiful rainfall, and riparian rights based water law provided both a sense of security for water resources and influenced the development of separate infrastructure systems across the region. The growth of water demand with rising populations with typical suburban sprawl, the development of multi-use reservoirs immediately downstream of urban areas, and increased hydroclimate variability have raised the potential for periodic water scarcity coupled with increasing eutrophication of water supplies. We discuss the interactions and tradeoffs between management of emerging water scarcity, quality and forest biodiversity in the Triangle as a model for the US Southeast. Institutional stakeholders include water supply and stormwater utilities, environmental NGOs, federal, state, county and municipal governments, developers and home owner associations. We emphasize principles of ecohydrologic resilience learned in heavily instrumented research watersheds, adapted to rapidly developing urban systems, and including socioeconomic and policy dynamics. Significant 20th century reforestation of central North Carolina landscapes have altered regional water balances, while providing both flood and water quality mitigation. The regrowth forest is dynamic and heterogeneous in water use based on age class and species distribution, with substantial plantation and natural regeneration. Forecasts of land use and forest structural and compositional change are based on scenario socioeconomic development, climate change and forecast wood product markets. Urban forest and green infrastructure has the potential to mediate the trade-offs and synergies of these goals, but is in a very nascent state. Computational tools to assess policy alternatives impacts on water quality, quantity and forest biodiversity are developed to serve information to multiple stakeholders, and communicate and visualize outcomes.

The first GCC Marine Biotechnology Symposium: Emerging Opportunities and Future Perspectives.

PubMed

Goddard, Stephen; Delghandi, Madjid; Dobretsov, Sergey; Al-Oufi, Hamed; Al-Habsi, Saoud; Burgess, J Grant

2015-06-01

With its diverse, living marine resources and rapidly growing educational and research infrastructure, the Sultanate of Oman is well-positioned to take advantage of the commercial opportunities presented by marine biotechnology. In recognition of potential development, an international symposium, Marine Biotechnology-Emerging Opportunities and Future Perspectives, was held in Muscat, November 12-13, 2013. Three keynote addresses were given, 23 oral presentations made, and a poster exhibition held. The final session reviewed national and regional issues, and the delegates agreed informally on a number of future actions. The potential for future development of marine biotechnology was recognized by all delegates, and following the symposium, they were surveyed for their views on how best to sustain and develop new activities. One hundred percent of respondents found the meeting useful and would support future symposia in the region. Fifty-one percent of Omani respondents recognized major organizational challenges and obstacles to the development of marine biotechnology compared with 23 % of overseas respondents. The need for greater collaboration between research institutions within the GCC region was recognized by 98 % of all respondents. The presentations and survey outcomes are reviewed in this paper.

Regional climate model simulations indicate limited climatic impacts by operational and planned European wind farms.

PubMed

Vautard, Robert; Thais, Françoise; Tobin, Isabelle; Bréon, François-Marie; Devezeaux de Lavergne, Jean-Guy; Colette, Augustin; Yiou, Pascal; Ruti, Paolo Michele

2014-01-01

The rapid development of wind energy has raised concerns about environmental impacts. Temperature changes are found in the vicinity of wind farms and previous simulations have suggested that large-scale wind farms could alter regional climate. However, assessments of the effects of realistic wind power development scenarios at the scale of a continent are missing. Here we simulate the impacts of current and near-future wind energy production according to European Union energy and climate policies. We use a regional climate model describing the interactions between turbines and the atmosphere, and find limited impacts. A statistically significant signal is only found in winter, with changes within ±0.3 °C and within 0-5% for precipitation. It results from the combination of local wind farm effects and changes due to a weak, but robust, anticyclonic-induced circulation over Europe. However, the impacts remain much weaker than the natural climate interannual variability and changes expected from greenhouse gas emissions.

[GENOTYPING OF THE BURKHOLDERIA MALLEI STRAINS BASED ON DIFFERENT REGION ANALYSIS].

PubMed

Bondareva, O S; Savchenko, S S; Tkachenko, G A; Ledeneva, M L; Lemasova, L V; Antonov, V A

2016-01-01

Development of the genotyping methods of glanders agent is urgent due to its high pathogenicity, lack of effective preventive measures and threat of the use of Burkholderia mallei as a biological weapon. In this work we proposed a scheme for the typing of the B. mallei strains based on different region analysis (DFR). The choice of variable loci differentially presented in various strains of glanders agents was performed by analyzing annotated whole-genome sequences of the B. mallei strains. Primers and fluorescence probes were designed for 9 selected loci. The amplification conditions for different regions were optimized in two variants: with electrophoretic detection and hybridization-fluorescence detection in the strip format. The possibility of applying the DFR analysis to genetic characterization of strains was assessed in 14 B. mallei strains. The genetic profiles of the studied B. mallei strains revealed that the developed DFR-typing scheme was characterized by high discrimination power (Hunter-Gaston index value was 0.92), reproducibility, rapidity, easy interpretation, and applicability for epidemiological surveillance of glanders.

Human long intrinsically disordered protein regions are frequent targets of positive selection.

PubMed

Afanasyeva, Arina; Bockwoldt, Mathias; Cooney, Christopher R; Heiland, Ines; Gossmann, Toni I

2018-06-01

Intrinsically disordered regions occur frequently in proteins and are characterized by a lack of a well-defined three-dimensional structure. Although these regions do not show a higher order of structural organization, they are known to be functionally important. Disordered regions are rapidly evolving, largely attributed to relaxed purifying selection and an increased role of genetic drift. It has also been suggested that positive selection might contribute to their rapid diversification. However, for our own species, it is currently unknown whether positive selection has played a role during the evolution of these protein regions. Here, we address this question by investigating the evolutionary pattern of more than 6600 human proteins with intrinsically disordered regions and their ordered counterparts. Our comparative approach with data from more than 90 mammalian genomes uses a priori knowledge of disordered protein regions, and we show that this increases the power to detect positive selection by an order of magnitude. We can confirm that human intrinsically disordered regions evolve more rapidly, not only within humans but also across the entire mammalian phylogeny. They have, however, experienced substantial evolutionary constraint, hinting at their fundamental functional importance. We find compelling evidence that disordered protein regions are frequent targets of positive selection and estimate that the relative rate of adaptive substitutions differs fourfold between disordered and ordered protein regions in humans. Our results suggest that disordered protein regions are important targets of genetic innovation and that the contribution of positive selection in these regions is more pronounced than in other protein parts. © 2018 Afanasyeva et al.; Published by Cold Spring Harbor Laboratory Press.

INTIMATE: Integration of Ice-core Marine and Terrestrial records

NASA Astrophysics Data System (ADS)

Turney, C. S. M.; Hoek, W. Z.; Intimate Group

2009-04-01

The principal aim of the INTIMATE Project is to synthesize high-resolution ice, terrestrial and marine records spanning the period 60,000 to 8000 years ago (henceforth given as 60-8 ka) to better understand the impact and mechanisms of rapid and extreme climate change, thereby reducing the uncertainty of future predictions. The specific objectives of the INTIMATE Project are to: • lead the development of highly-precise and accurate age-depth models in ice-core, marine, and terrestrial records (including identification and validation of time-stratigraphic marker horizons) over the period 60-8 ka; • promote the development of quantified climate reconstruction methods; • determine the timing, rates of change, spatial variability and climate gradients during key periods at the regional, hemispheric and global level (in collaboration with the INQUA-recognized Australasian INTIMATE Project and future regional INTIMATE projects); • determine the environmental impact of rapid and extreme climate changes in the North Atlantic region (focusing on megafauna and vegetation); and develop climate and environmental reconstructions of change that may be used in climate modeling to better determine the mechanisms of change and how signals are propagated globally. For correlation, precise dating of the records from the different realms is imperative. The development of an event-stratigraphy for the Last Glacial-Interglacial Transition (Björck et al., 1998) provided a template to compare other, independently dated, palaeoclimate records with the high-resolution Greenland oxygen isotope records. The event-stratigraphy has recently been refined and updated to the new NGRIP record using the GICC05 timescale (Lowe et al., 2008), which will be outlined in this paper. References: Björck, S., Walker, M.J.C., Cwynar, L.C., Johnsen, S., Knudsen, K.-L., Lowe, J.J., Wohlfarth, B. and INTIMATE members (1998) An event stratigraphy for the Last Termination in the North Atlantic region based on the Greenland ice-core record: a proposal by the INTIMATE group, Journal of Quaternary Science 13, 283-292. Lowe, J.J., Rasmussen, S.O., Björck, S., Hoek, W.Z., Steffensen, J.P., Walker, M.J.C., Yu, Z. and INTIMATE group (2008) Precise dating and correlation of events in the North Atlantic region during the Last Termination: a revised protocol recommended by the INTIMATE group. Quaternary Science Reviews, 27, 6-17.

[Land Use Pattern Change and Regional Sustainability Evaluation of Wetland in Jiaogang Lake].

PubMed

Yang, Yang; Cai, Yi-min; Bai, Yan-ying; Chen, Wei-ping; Yang, Xiu-chao

2015-06-01

Changes in land use and sustainability evaluation of wetland in Jiaogang Lake from 1995 to 2013 were analyzed, based on the land use change models and an index system, supported by RS, GIS, and social statistical data. The results showed: (1) dry land, paddy field, and building land were the predominant landscape in the study area. The arable land was mainly converted during 1995-2000, which was driven by the extension of agriculture, and the building land increased significantly during 2010-2013, which was driven by the tourism development. (2) Compared to the beginning research area, the building land increased by 123.3%, and the wetland decreased by 23.15%. The land system was at risk for a low proportion of wetland, scarcity of unused land, and the fragmented landscape. (3) The regional sustainability results were bad level, bad level, poor level, good level, and poor level during the different periods, with some room for improvement. (4) The fitness of regional sustainability in study area yielded satisfactory results in 2010, owing to the rapid growth of regional productivity and the regional stability. Since 2010, with the increasing environmental load, the regional sustainability fell down to the poor level. The obstruction of sustainable development is necessary to be addressed in the study area.

Blood–Brain Barrier Leakage during Early Epileptogenesis Is Associated with Rapid Remodeling of the Neurovascular Unit

PubMed Central

Breuer, Heike; Leiter, Ina; Märkel, Martin; Bascuñana, Pablo; Michalski, Dominik; Bengel, Frank M.; Löscher, Wolfgang; Meier, Martin; Bankstahl, Jens P.; Härtig, Wolfgang

2018-01-01

Abstract Increased permeability of the blood–brain barrier (BBB) following cerebral injury results in regional extravasation of plasma proteins and can critically contribute to the pathogenesis of epilepsy. Here, we comprehensively explore the spatiotemporal evolution of a main extravasation component, albumin, and illuminate associated responses of the neurovascular unit (NVU) contributing to early epileptogenic neuropathology. We applied translational in vivo MR imaging and complementary immunohistochemical analyses in the widely used rat pilocarpine post–status epilepticus (SE) model. The observed rapid BBB leakage affected major epileptogenesis-associated brain regions, peaked between 1 and 2 d post-SE, and rapidly declined thereafter, accompanied by cerebral edema generally following the same time course. At peak of BBB leakage, serum albumin colocalized with NVU constituents, such as vascular components, neurons, and brain immune cells. Surprisingly, astroglial markers did not colocalize with albumin, and aquaporin-4 (AQP4) was clearly reduced in areas of leaky BBB, indicating a severe disturbance of astrocyte-mediated endothelial-neuronal coupling. In addition, a distinct adaptive reorganization process of the NVU vasculature apparently takes place at sites of albumin presence, substantiated by reduced immunoreactivity of endothelial and changes in vascular basement membrane markers. Taken together, degenerative events at the level of the NVU, affecting vessels, astrocytes, and neurons, seem to outweigh reconstructive processes. Considering the rapidly occurring BBB leakage and subsequent impairment of the NVU, our data support the necessity of a prompt BBB-restoring treatment as one component of rational therapeutic intervention to prevent epileptogenesis and the development of other detrimental sequelae of SE. PMID:29854942

Survey on the possibility of introducing new energy to regional development plans

NASA Astrophysics Data System (ADS)

1988-03-01

This report covers nationwide large-scale resort plans and at the same time studies the possibility of introducing new energy systems, mainly cogeneration, and their effects. Japanese industrial structure is rapidly moving toward information and service areas, and the development of resorts has become very active. With the increase of resort demands, much is expected of resort development as a means of regional promotion. Special features of energy consumption in resort facilities are that annual demand is large, that energy consumption fluctuates greatly, and that energy supply cost is high. These features are especially conspicuous in smaller facilities. Most suited for resort lodging facilities is a co-generation system, especially a diesel engine system. This system is expected to conserve energy; but to promote this system, it is necessary to revise the preferential tax treatment and Fire Service Act to meet the actual circumstances, and to develop a highly reliable system that can be operated unattended. An economical system in view of overall costs is also essential.

Development of an endoscopic fluorescence image-guided OCT probe for oral cancer detection

NASA Astrophysics Data System (ADS)

McNichols, Roger J.; Gowda, Ashok; Bell, Brent A.; Johnigan, Richard M.; Calhoun, Karen H.; Motamedi, Massoud

2001-06-01

Oral squamous cell carcinoma is a disease which progresses through a number of well-defined morphological and biochemical changes. Optical coherence tomography (OCT) is a rapidly-evolving, non-invasive imaging modality which allows detailed probing of subsurface tissue structures with resolution on the order of microns. While this technique offers tremendous potential as a diagnostic tool for detection and characterization of oral cancer, OCT imaging is presently associated with a field of view on the order of millimeters, and acquisition time on the order of seconds. Thus, OCT's utility as a rapid cancer screening technique is presently limited. On the other hand, imaging of tissue autofluorescence provides a very rapid, high-throughput method for cancer screening. However, while autofluorescence measures may be sensitive to cancer, they are often non- specific and lead to a large number of false positives. In the present work, we have developed a fluorescence image guided optical coherence tomographic (FIG-OCT) probe in which tissue autofluorescence images are simultaneously used to guide OCT image acquisition of suspicious regions in real time. We have begun pre-clinical pilot studies with this instrument in a DMBA-induced model of oral cancer in the hamster cheek pouch. Initial results indicate that the FIG- OCT approach shows promise as a rapid and effective tool for screening of oral cancer.

Assessment of VAS soundings in the analysis of a preconvective environment

NASA Technical Reports Server (NTRS)

Mostek, A.; Uccellini, L. W.; Petersen, R. A.; Chesters, D.

1985-01-01

Retrievals from the VISSR Atmospheric Sounder (VAS) are combined with conventional data to assess the impact of geosynchronous satellite soundings upon the analysis of a preconvective environment. VAS retrievals of temperature, dewpoint, equivalent potential temperature, precipitable water, and lifted index are derived with 60 km resolution at 3 hour intervals. When VAS fields are combined with analyses from conventional data sources, mesoscale regions with convective instability are more clearly delineated prior to the rapid development of the thunderstorms. The retrievals differentiate isolated areas in which air extends throughout the lower troposphere from those regions where moisture is confined to a thin layer near the Earth's surface. The analyses of the VAS retrievals identify significant spatial gradients and temporal changes in the thermal and moisture fields, especially in the regions between radiosonde observations.

Bat Accelerated Regions Identify a Bat Forelimb Specific Enhancer in the HoxD Locus

PubMed Central

Mason, Mandy K.; VanderMeer, Julia E.; Zhao, Jingjing; Eckalbar, Walter L.; Logan, Malcolm; Illing, Nicola; Pollard, Katherine S.; Ahituv, Nadav

2016-01-01

The molecular events leading to the development of the bat wing remain largely unknown, and are thought to be caused, in part, by changes in gene expression during limb development. These expression changes could be instigated by variations in gene regulatory enhancers. Here, we used a comparative genomics approach to identify regions that evolved rapidly in the bat ancestor, but are highly conserved in other vertebrates. We discovered 166 bat accelerated regions (BARs) that overlap H3K27ac and p300 ChIP-seq peaks in developing mouse limbs. Using a mouse enhancer assay, we show that five Myotis lucifugus BARs drive gene expression in the developing mouse limb, with the majority showing differential enhancer activity compared to the mouse orthologous BAR sequences. These include BAR116, which is located telomeric to the HoxD cluster and had robust forelimb expression for the M. lucifugus sequence and no activity for the mouse sequence at embryonic day 12.5. Developing limb expression analysis of Hoxd10-Hoxd13 in Miniopterus natalensis bats showed a high-forelimb weak-hindlimb expression for Hoxd10-Hoxd11, similar to the expression trend observed for M. lucifugus BAR116 in mice, suggesting that it could be involved in the regulation of the bat HoxD complex. Combined, our results highlight novel regulatory regions that could be instrumental for the morphological differences leading to the development of the bat wing. PMID:27019019

Rapid Differentiation and In Situ Detection of 16 Sourdough Lactobacillus Species by Multiplex PCR

PubMed Central

Settanni, Luca; van Sinderen, Douwe; Rossi, Jone; Corsetti, Aldo

2005-01-01

A two-step multiplex PCR-based method was designed for the rapid detection of 16 species of lactobacilli known to be commonly present in sourdough. The first step of multiplex PCR was developed with a mixture of group-specific primers, while the second step included three multiplex PCR assays with a mixture of species-specific primers. Primers were derived from sequences that specify the 16S rRNA, the 16S-23S rRNA intergenic spacer region, and part of the 23S rRNA gene. The primer pairs designed were shown to exclusively amplify the targeted rrn operon fragment of the corresponding species. Due to the reliability of simultaneously identifying Lactobacillus plantarum, Lactobacillus pentosus, and Lactobacillus paraplantarum, a previously described multiplex PCR method employing recA gene-derived primers was included in the multiplex PCR system. The combination of a newly developed, quick bacterial DNA extraction method from sourdough and this multiplex PCR assay allows the rapid in situ detection of several sourdough-associated lactobacilli, including the recently described species Lactobacillus rossii, and thus represents a very useful alternative to culture-based methodologies. PMID:15933001

Health policy in Asia and the Pacific: Navigating local needs and global challenges

PubMed Central

Lee, Kelley

2014-01-01

Asia and the Pacific are undergoing a remarkable economic transformation which is occurring at an exceptional pace. There is clear evidence of an equally rapid epidemiological transition in the region. This paper sets out the policy challenges of building healthy societies in the context of rapid economic change. The region’s location at the crossroads of contemporary globalization, resulting in intensified population mobility, large-scale trade and investment, and pressures to take collective action on shared problems, adds to the complexity of this task. The paper argues that health is integral to building stable and sustainable societies, and that there are opportunities to develop more holistic approaches that bring together hitherto separate policy spheres. PMID:24592312

Improved but unsustainable: accounting for sachet water in post-2015 goals for global safe water.

PubMed

Stoler, Justin

2012-12-01

The advent and rapid spread of sachet drinking water in West Africa presents a new challenge for providing sustainable access to global safe water. Sachet water has expanded drinking water access and is often of sufficient quality to serve as an improved water source for Millennium Development Goals (MDG) monitoring purposes, yet sachets are an unsustainable water delivery vehicle due to their overwhelming plastic waste burden. Monitoring of primary drinking water sources in West Africa generally ignores sachet water, despite its growing ubiquity. Sub-Saharan Africa as a region is unlikely to meet the MDG Target for drinking water provision, and post-2015 monitoring activities may depend upon rapid adaptability to local drinking water trends. © 2012 Blackwell Publishing Ltd.

Bomb or Boon: Linking Population, People and Power in Fragile Regions: Comment on "The Pill Is Mightier Than the Sword".

PubMed

Gilpin, Raymond

2015-10-02

The relationship between population structure and violent conflict is complex and heavily dependent on the behavior of other variables like governance, economic prospects, and urbanization. While addressing rapid population growth might be a necessary condition for peace, it is by no means sufficient. Concomitant steps must also be taken to foster inclusivity, guarantee broader rights for all, particularly women, rebuild social contracts and ensure that all citizens have equal access to economic opportunity. Measures to control family size could reduce dependency and create greater socio-economic opportunities for women and youth, By so doing, the "youth bulge" phenomenon could be a boon for rapidly growing developing countries. © 2016 by Kerman University of Medical Sciences.

Rapidity and species dependence of particle production at large transverse momentum for d+Au collisions at sNN=200 GeV

NASA Astrophysics Data System (ADS)

Abelev, B. I.; Adams, J.; Aggarwal, M. M.; Ahammed, Z.; Amonett, J.; Anderson, B. D.; Anderson, M.; Arkhipkin, D.; Averichev, G. S.; Bai, Y.; Balewski, J.; Barannikova, O.; Barnby, L. S.; Baudot, J.; Bekele, S.; Belaga, V. V.; Bellingeri-Laurikainen, A.; Bellwied, R.; Benedosso, F.; Bhardwaj, S.; Bhasin, A.; Bhati, A. K.; Bichsel, H.; Bielcik, J.; Bielcikova, J.; Bland, L. C.; Blyth, S.-L.; Bonner, B. E.; Botje, M.; Bouchet, J.; Brandin, A. V.; Bravar, A.; Bystersky, M.; Cadman, R. V.; Cai, X. Z.; Caines, H.; Sánchez, M. Calderón De La Barca; Castillo, J.; Catu, O.; Cebra, D.; Chajecki, Z.; Chaloupka, P.; Chattopadhyay, S.; Chen, H. F.; Chen, J. H.; Cheng, J.; Cherney, M.; Chikanian, A.; Christie, W.; Coffin, J. P.; Cormier, T. M.; Cosentino, M. R.; Cramer, J. G.; Crawford, H. J.; Das, D.; Das, S.; Daugherity, M.; Moura, M. M. De; Dedovich, T. G.; Dephillips, M.; Derevschikov, A. A.; Didenko, L.; Dietel, T.; Djawotho, P.; Dogra, S. M.; Dong, W. J.; Dong, X.; Draper, J. E.; Du, F.; Dunin, V. B.; Dunlop, J. C.; Mazumdar, M. R. Dutta; Eckardt, V.; Edwards, W. R.; Efimov, L. G.; Emelianov, V.; Engelage, J.; Eppley, G.; Erazmus, B.; Estienne, M.; Fachini, P.; Fatemi, R.; Fedorisin, J.; Filimonov, K.; Filip, P.; Finch, E.; Fine, V.; Fisyak, Y.; Fu, J.; Gagliardi, C. A.; Gaillard, L.; Ganti, M. S.; Ghazikhanian, V.; Ghosh, P.; Gonzalez, J. E.; Gorbunov, Y. G.; Gos, H.; Grebenyuk, O.; Grosnick, D.; Guertin, S. M.; Guimaraes, K. S. F. F.; Guo, Y.; Gupta, N.; Gutierrez, T. D.; Haag, B.; Hallman, T. J.; Hamed, A.; Harris, J. W.; He, W.; Heinz, M.; Henry, T. W.; Hepplemann, S.; Hippolyte, B.; Hirsch, A.; Hjort, E.; Hoffman, A. M.; Hoffmann, G. W.; Horner, M. J.; Huang, H. Z.; Huang, S. L.; Hughes, E. W.; Humanic, T. J.; Igo, G.; Jacobs, P.; Jacobs, W. W.; Jakl, P.; Jia, F.; Jiang, H.; Jones, P. G.; Judd, E. G.; Kabana, S.; Kang, K.; Kapitan, J.; Kaplan, M.; Keane, D.; Kechechyan, A.; Khodyrev, V. Yu.; Kim, B. C.; Kiryluk, J.; Kisiel, A.; Kislov, E. M.; Klein, S. R.; Kocoloski, A.; Koetke, D. D.; Kollegger, T.; Kopytine, M.; Kotchenda, L.; Kouchpil, V.; Kowalik, K. L.; Kramer, M.; Kravtsov, P.; Kravtsov, V. I.; Krueger, K.; Kuhn, C.; Kulikov, A. I.; Kumar, A.; Kuznetsov, A. A.; Lamont, M. A. C.; Landgraf, J. M.; Lange, S.; Lapointe, S.; Laue, F.; Lauret, J.; Lebedev, A.; Lednicky, R.; Lee, C.-H.; Lehocka, S.; Levine, M. J.; Li, C.; Li, Q.; Li, Y.; Lin, G.; Lin, X.; Lindenbaum, S. J.; Lisa, M. A.; Liu, F.; Liu, H.; Liu, J.; Liu, L.; Liu, Z.; Ljubicic, T.; Llope, W. J.; Long, H.; Longacre, R. S.; Lopez-Noriega, M.; Love, W. A.; Lu, Y.; Ludlam, T.; Lynn, D.; Ma, G. L.; Ma, J. G.; Ma, Y. G.; Magestro, D.; Mahapatra, D. P.; Majka, R.; Mangotra, L. K.; Manweiler, R.; Margetis, S.; Markert, C.; Martin, L.; Matis, H. S.; Matulenko, Yu. A.; McClain, C. J.; McShane, T. S.; Melnick, Yu.; Meschanin, A.; Millane, J.; Miller, M. L.; Minaev, N. G.; Mioduszewski, S.; Mironov, C.; Mischke, A.; Mishra, D. K.; Mitchell, J.; Mohanty, B.; Molnar, L.; Moore, C. F.; Morozov, D. A.; Munhoz, M. G.; Nandi, B. K.; Nattrass, C.; Nayak, T. K.; Nelson, J. M.; Netrakanti, P. K.; Nikitin, V. A.; Nogach, L. V.; Nurushev, S. B.; Odyniec, G.; Ogawa, A.; Okorokov, V.; Oldenburg, M.; Olson, D.; Pachr, M.; Pal, S. K.; Panebratsev, Y.; Panitkin, S. Y.; Pavlinov, A. I.; Pawlak, T.; Peitzmann, T.; Perevoztchikov, V.; Perkins, C.; Peryt, W.; Petrov, V. A.; Phatak, S. C.; Picha, R.; Planinic, M.; Pluta, J.; Poljak, N.; Porile, N.; Porter, J.; Poskanzer, A. M.; Potekhin, M.; Potrebenikova, E.; Potukuchi, B. V. K. S.; Prindle, D.; Pruneau, C.; Putschke, J.; Rakness, G.; Raniwala, R.; Raniwala, S.; Ray, R. L.; Razin, S. V.; Reinnarth, J.; Relyea, D.; Retiere, F.; Ridiger, A.; Ritter, H. G.; Roberts, J. B.; Rogachevskiy, O. V.; Romero, J. L.; Rose, A.; Roy, C.; Ruan, L.; Russcher, M. J.; Sahoo, R.; Sakuma, T.; Salur, S.; Sandweiss, J.; Sarsour, M.; Sazhin, P. S.; Schambach, J.; Scharenberg, R. P.; Schmitz, N.; Schweda, K.; Seger, J.; Selyuzhenkov, I.; Seyboth, P.; Shabetai, A.; Shahaliev, E.; Shao, M.; Sharma, M.; Shen, W. Q.; Shimanskiy, S. S.; Sichtermann, E.; Simon, F.; Singaraju, R. N.; Smirnov, N.; Snellings, R.; Sood, G.; Sorensen, P.; Sowinski, J.; Speltz, J.; Spinka, H. M.; Srivastava, B.; Stadnik, A.; Stanislaus, T. D. S.; Stock, R.; Stolpovsky, A.; Strikhanov, M.; Stringfellow, B.; Suaide, A. A. P.; Sugarbaker, E.; Sumbera, M.; Sun, Z.; Surrow, B.; Swanger, M.; Symons, T. J. M.; Toledo, A. Szanto De; Tai, A.; Takahashi, J.; Tang, A. H.; Tarnowsky, T.; Thein, D.; Thomas, J. H.; Timmins, A. R.; Timoshenko, S.; Tokarev, M.; Trainor, T. A.; Trentalange, S.; Tribble, R. E.; Tsai, O. D.; Ulery, J.; Ullrich, T.; Underwood, D. G.; Buren, G. Van; Kolk, N. Van Der; Leeuwen, M. Van; Molen, A. M. Vander; Varma, R.; Vasilevski, I. M.; Vasiliev, A. N.; Vernet, R.; Vigdor, S. E.; Viyogi, Y. P.; Vokal, S.; Voloshin, S. A.; Waggoner, W. T.; Wang, F.; Wang, G.; Wang, J. S.; Wang, X. L.; Wang, Y.; Watson, J. W.; Webb, J. C.; Westfall, G. D.; Wetzler, A.; , C. Whitten, Jr.; Wieman, H.; Wissink, S. W.; Witt, R.; Wood, J.; Wu, J.; Xu, N.; Xu, Q. H.; Xu, Z.; Yepes, P.; Yoo, I.-K.; Yurevich, V. I.; Zhan, W.; Zhang, H.; Zhang, W. M.; Zhang, Y.; Zhang, Z. P.; Zhao, Y.; Zhong, C.; Zoulkarneev, R.; Zoulkarneeva, Y.; Zubarev, A. N.; Zuo, J. X.

2007-11-01

We determine rapidity asymmetry in the production of charged pions, protons, and antiprotons for large transverse momentum (pT) for d+Au collisions at sNN=200 GeV. The rapidity asymmetry is defined as the ratio of particle yields at backward rapidity (Au beam direction) to those at forward rapidity (d beam direction). The identified hadrons are measured in the rapidity regions |y|<0.5 and 0.5<|y|<1.0 for the pT range 2.5

High altitude color photography as a tool for regional analysis: As demonstrated for southeastern Florida

NASA Technical Reports Server (NTRS)

Eyre, L. A.

1972-01-01

High altitude color and color infrared photography of the tri-county region of southeast Florida made it feasible to evaluate its potential for quantifying the dimensions of regional change. Attention was focused upon three main aspects of change in the region, which in fact overlap. These were; (1) the transformation of the southeast Florida wetlands; (2) the expansion of agriculture; and (3) the growth of the urbanized area. The development analyzed covered the period of thirteen years from 1956 to 1969. Results using this new 18 km photography were superior because of the degree of resolution, the combined power of color and color infrared interpretation, and the large area covered by each frame. The greatest advantage of high altitude imagery is the time-saving element, since it is possible to delineate and identify major geographic patterns over thousands of sq km very rapidly.

Automated rapid finite fault inversion for megathrust earthquakes: Application to the Maule (2010), Iquique (2014) and Illapel (2015) great earthquakes

NASA Astrophysics Data System (ADS)

Benavente, Roberto; Cummins, Phil; Dettmer, Jan

2016-04-01

Rapid estimation of the spatial and temporal rupture characteristics of large megathrust earthquakes by finite fault inversion is important for disaster mitigation. For example, estimates of the spatio-temporal evolution of rupture can be used to evaluate population exposure to tsunami waves and ground shaking soon after the event by providing more accurate predictions than possible with point source approximations. In addition, rapid inversion results can reveal seismic source complexity to guide additional, more detailed subsequent studies. This work develops a method to rapidly estimate the slip distribution of megathrust events while reducing subjective parameter choices by automation. The method is simple yet robust and we show that it provides excellent preliminary rupture models as soon as 30 minutes for three great earthquakes in the South-American subduction zone. This may slightly change for other regions depending on seismic station coverage but method can be applied to any subduction region. The inversion is based on W-phase data since it is rapidly and widely available and of low amplitude which avoids clipping at close stations for large events. In addition, prior knowledge of the slab geometry (e.g. SLAB 1.0) is applied and rapid W-phase point source information (time delay and centroid location) is used to constrain the fault geometry and extent. Since the linearization by multiple time window (MTW) parametrization requires regularization, objective smoothing is achieved by the discrepancy principle in two fully automated steps. First, the residuals are estimated assuming unknown noise levels, and second, seeking a subsequent solution which fits the data to noise level. The MTW scheme is applied with positivity constraints and a solution is obtained by an efficient non-negative least squares solver. Systematic application of the algorithm to the Maule (2010), Iquique (2014) and Illapel (2015) events illustrates that rapid finite fault inversion with teleseismic data is feasible and provides meaningful results. The results for the three events show excellent data fits and are consistent with other solutions showing most of the slip occurring close to the trench for the Maule an Illapel events and some deeper slip for the Iquique event. Importantly, the Illapel source model predicts tsunami waveforms of close agreement with observed waveforms. Finally, we develop a new Bayesian approach to approximate uncertainties as part of the rapid inversion scheme with positivity constraints. Uncertainties are estimated by approximating the posterior distribution as a multivariate log-normal distribution. While solving for the posterior adds some additional computational cost, we illustrate that uncertainty estimation is important for meaningful interpretation of finite fault models.

The Impacts of Spatiotemporal Landscape Changes on Water Quality in Shenzhen, China

PubMed Central

Liu, Zhenhuan; Yang, Haiyan

2018-01-01

The urban landscape in China has changed rapidly over the past four decades, which has led to various environmental consequences, such as water quality degradation at the regional scale. To improve water restoration strategies and policies, this study assessed the relationship between water quality and landscape change in Shenzhen, China, using panel regression analysis. The results show that decreases in natural and semi-natural landscape compositions have had significant negative effects on water quality. Landscape composition and configuration changes accounted for 39–58% of the variation in regional water quality degradation. Additionally, landscape fragmentation indices, such as patch density (PD) and the number of patches (NP), are important indicators of the drivers of water quality degradation. PD accounted for 2.03–5.44% of the variability in water quality, while NP accounted for −1.63% to −4.98% of the variability. These results indicate that reducing landscape fragmentation and enhancing natural landscape composition at the watershed scale are vital to improving regional water quality. The study findings suggest that urban landscape optimization is a promising strategy for mitigating urban water quality degradation, and the results can be used in policy making for the sustainable development of the hydrological environment in rapidly urbanizing areas. PMID:29786672

The Impacts of Spatiotemporal Landscape Changes on Water Quality in Shenzhen, China.

PubMed

Liu, Zhenhuan; Yang, Haiyan

2018-05-22

The urban landscape in China has changed rapidly over the past four decades, which has led to various environmental consequences, such as water quality degradation at the regional scale. To improve water restoration strategies and policies, this study assessed the relationship between water quality and landscape change in Shenzhen, China, using panel regression analysis. The results show that decreases in natural and semi-natural landscape compositions have had significant negative effects on water quality. Landscape composition and configuration changes accounted for 39⁻58% of the variation in regional water quality degradation. Additionally, landscape fragmentation indices, such as patch density (PD) and the number of patches (NP), are important indicators of the drivers of water quality degradation. PD accounted for 2.03⁻5.44% of the variability in water quality, while NP accounted for -1.63% to -4.98% of the variability. These results indicate that reducing landscape fragmentation and enhancing natural landscape composition at the watershed scale are vital to improving regional water quality. The study findings suggest that urban landscape optimization is a promising strategy for mitigating urban water quality degradation, and the results can be used in policy making for the sustainable development of the hydrological environment in rapidly urbanizing areas.

The concentration of the global alcohol industry and its penetration in the African region.

PubMed

Jernigan, David H; Babor, Thomas F

2015-04-01

To describe the penetration and expansion of the global alcohol industry into the African region, as a context for exploring the implications for public health. Source materials for this study came primarily from market research and the business press. This was supplemented by industry sources (from websites, company annual reports), World Health Organization reports and the scientific literature. Drinking in Africa is characterized by high rates of abstention and a high prevalence of heavy episodic consumption among those who drink. Much of the region is currently experiencing a rapid rise in consumption. Rising populations and income and the rapid pace of urbanization make Africa very attractive to the global alcohol industry, and industry leaders have identified Africa as a key area for growth. The shift from collaboration to competition in Africa among the global alcohol companies has prompted increasing alcohol production, promotion, new product development, pricing schemes and stakeholder lobbying. Beer consumption has increased across most of the continent, and global brewers view themselves as legitimate players at the alcohol policy table. Weak alcohol policy environments may be compromised further in terms of public health protections by alcohol industry opposition to effective measures such as marketing regulations, availability controls and taxation. © 2014 Society for the Study of Addiction.

Generation of Aptamers from A Primer-Free Randomized ssDNA Library Using Magnetic-Assisted Rapid Aptamer Selection

NASA Astrophysics Data System (ADS)

Tsao, Shih-Ming; Lai, Ji-Ching; Horng, Horng-Er; Liu, Tu-Chen; Hong, Chin-Yih

2017-04-01

Aptamers are oligonucleotides that can bind to specific target molecules. Most aptamers are generated using random libraries in the standard systematic evolution of ligands by exponential enrichment (SELEX). Each random library contains oligonucleotides with a randomized central region and two fixed primer regions at both ends. The fixed primer regions are necessary for amplifying target-bound sequences by PCR. However, these extra-sequences may cause non-specific bindings, which potentially interfere with good binding for random sequences. The Magnetic-Assisted Rapid Aptamer Selection (MARAS) is a newly developed protocol for generating single-strand DNA aptamers. No repeat selection cycle is required in the protocol. This study proposes and demonstrates a method to isolate aptamers for C-reactive proteins (CRP) from a randomized ssDNA library containing no fixed sequences at 5‧ and 3‧ termini using the MARAS platform. Furthermore, the isolated primer-free aptamer was sequenced and binding affinity for CRP was analyzed. The specificity of the obtained aptamer was validated using blind serum samples. The result was consistent with monoclonal antibody-based nephelometry analysis, which indicated that a primer-free aptamer has high specificity toward targets. MARAS is a feasible platform for efficiently generating primer-free aptamers for clinical diagnoses.

Immune-driven recombination and loss of control after HIV superinfection.

PubMed

Streeck, Hendrik; Li, Bin; Poon, Art F Y; Schneidewind, Arne; Gladden, Adrianne D; Power, Karen A; Daskalakis, Demetre; Bazner, Suzane; Zuniga, Rosario; Brander, Christian; Rosenberg, Eric S; Frost, Simon D W; Altfeld, Marcus; Allen, Todd M

2008-08-04

After acute HIV infection, CD8(+) T cells are able to control viral replication to a set point. This control is often lost after superinfection, although the mechanism behind this remains unclear. In this study, we illustrate in an HLA-B27(+) subject that loss of viral control after HIV superinfection coincides with rapid recombination events within two narrow regions of Gag and Env. Screening for CD8(+) T cell responses revealed that each of these recombination sites (approximately 50 aa) encompassed distinct regions containing two immunodominant CD8 epitopes (B27-KK10 in Gag and Cw1-CL9 in Env). Viral escape and the subsequent development of variant-specific de novo CD8(+) T cell responses against both epitopes were illustrative of the significant immune selection pressures exerted by both responses. Comprehensive analysis of the kinetics of CD8 responses and viral evolution indicated that the recombination events quickly facilitated viral escape from both dominant WT- and variant-specific responses. These data suggest that the ability of a superinfecting strain of HIV to overcome preexisting immune control may be related to its ability to rapidly recombine in critical regions under immune selection pressure. These data also support a role for cellular immune pressures in driving the selection of new recombinant forms of HIV.

Creating a Coastal National Elevation Database (CoNED) for science and conservation applications

USGS Publications Warehouse

Thatcher, Cindy A.; Brock, John C.; Danielson, Jeffrey J.; Poppenga, Sandra K.; Gesch, Dean B.; Palaseanu-Lovejoy, Monica; Barras, John; Evans, Gayla A.; Gibbs, Ann

2016-01-01

The U.S. Geological Survey is creating the Coastal National Elevation Database, an expanding set of topobathymetric elevation models that extend seamlessly across coastal regions of high societal or ecological significance in the United States that are undergoing rapid change or are threatened by inundation hazards. Topobathymetric elevation models are raster datasets useful for inundation prediction and other earth science applications, such as the development of sediment-transport and storm surge models. These topobathymetric elevation models are being constructed by the broad regional assimilation of numerous topographic and bathymetric datasets, and are intended to fulfill the pressing needs of decision makers establishing policies for hazard mitigation and emergency preparedness, coastal managers tasked with coastal planning compatible with predictions of inundation due to sea-level rise, and scientists investigating processes of coastal geomorphic change. A key priority of this coastal elevation mapping effort is to foster collaborative lidar acquisitions that meet the standards of the USGS National Geospatial Program's 3D Elevation Program, a nationwide initiative to systematically collect high-quality elevation data. The focus regions are located in highly dynamic environments, for example in areas subject to shoreline change, rapid wetland loss, hurricane impacts such as overwash and wave scouring, and/or human-induced changes to coastal topography.

Rapid electrochemical assessment of tumor suppressor gene methylations in raw human serum, and tumor cells and tissues using immuno-magnetic beads and selective DNA hybridization.

PubMed

Povedano, Eloy; Valverde, Alejandro; Ruiz-Valdepeñas Montiel, Víctor; Pedrero, María; Yáñez-Sedeño, Paloma; Barderas, Rodrigo; San Segundo-Acosta, Pablo; Peláez-García, Alberto; Mendiola, Marta; Hardisson, David; Campuzano, Susana; Pingarron, José Manuel

2018-05-09

We report a rapid and sensitive electrochemical strategy for the detection of gene-specific 5-methylcytosine DNA methylation. Magnetic beads (MBs) modified with an antibody specific for 5-methylcytosines (5-mC) are employed for the selective capture of any 5-mC methylated single-stranded (ss)DNA sequence. A flanking region next to the 5-mCs of the captured methylated ssDNA is recognized by selective hybridization with a synthetic biotinylated DNA sequence, further labeled with an HRP streptavidin conjugate. Amperometric transduction at disposable screen-printed carbon electrodes (SPCEs) is employed. The developed biosensor exhibits a dynamic range from 3.9 to 500 pM and a detection limit of 1.2 pM for the methylated synthetic sequence of the tumor suppressor gene O-6-methylguanine-DNA methyltransferase (MGMT) promoter region. The applicability of this strategy is demonstrated through the 45 min-analysis of specific methylation in the MGMT promoter region directly in raw spiked human serum samples and in genomic DNA extracted from U-87 glioblastoma cells and paraffin-embedded brain tumor tissues without any amplification and pretreatment step. © 2018 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Regional Earthquake Shaking and Loss Estimation

NASA Astrophysics Data System (ADS)

Sesetyan, K.; Demircioglu, M. B.; Zulfikar, C.; Durukal, E.; Erdik, M.

2009-04-01

This study, conducted under the JRA-3 component of the EU NERIES Project, develops a methodology and software (ELER) for the rapid estimation of earthquake shaking and losses in the Euro-Mediterranean region. This multi-level methodology developed together with researchers from Imperial College, NORSAR and ETH-Zurich is capable of incorporating regional variability and sources of uncertainty stemming from ground motion predictions, fault finiteness, site modifications, inventory of physical and social elements subjected to earthquake hazard and the associated vulnerability relationships. GRM Risk Management, Inc. of Istanbul serves as sub-contractor tor the coding of the ELER software. The methodology encompasses the following general steps: 1. Finding of the most likely location of the source of the earthquake using regional seismotectonic data base and basic source parameters, and if and when possible, by the estimation of fault rupture parameters from rapid inversion of data from on-line stations. 2. Estimation of the spatial distribution of selected ground motion parameters through region specific ground motion attenuation relationships and using shear wave velocity distributions.(Shake Mapping) 4. Incorporation of strong ground motion and other empirical macroseismic data for the improvement of Shake Map 5. Estimation of the losses (damage, casualty and economic) at different levels of sophistication (0, 1 and 2) that commensurate with the availability of inventory of human built environment (Loss Mapping) Both Level 0 (similar to PAGER system of USGS) and Level 1 analyses of the ELER routine are based on obtaining intensity distributions analytically and estimating total number of casualties and their geographic distribution either using regionally adjusted intensity-casualty or magnitude-casualty correlations (Level 0) of using regional building inventory data bases (Level 1). Level 0 analysis is similar to the PAGER system being developed by USGS. For given basis source parameters the intensity distributions can be computed using: a)Regional intensity attenuation relationships, b)Intensity correlations with attenuation relationship based PGV, PGA, and Spectral Amplitudes and, c)Intensity correlations with synthetic Fourier Amplitude Spectrum. In Level 1 analysis EMS98 based building vulnerability relationships are used for regional estimates of building damage and the casualty distributions. Results obtained from pilot applications of the Level 0 and Level 1 analysis modes of the ELER software to the 1999 M 7.4 Kocaeli, 1995 M 6.1 Dinar, and 2007 M 5.4 Bingol earthquakes in terms of ground shaking and losses are presented and comparisons with the observed losses are made. The regional earthquake shaking and loss information is intented for dissemination in a timely manner to related agencies for the planning and coordination of the post-earthquake emergency response. However the same software can also be used for scenario earthquake loss estimation and related Monte-Carlo type simulations.

Constraining the location of rapid gamma-ray flares in the flat spectrum radio quasar 3C 273 [Constraining the location of rapid gamma-ray flares in the FSRQ 3C 273

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rani, B.; Lott, B.; Krichbaum, T. P.

2013-09-02

Here, we present a γ-ray photon flux and spectral variability study of the flat-spectrum radio quasar 3C 273 over a rapid flaring activity period between September 2009 to April 2010. Five major flares were observed in the source during this period. The most rapid flare observed in the source has a flux doubling time of 1.1 hr. The rapid γ-ray flares allow us to constrain the location and size of the γ-ray emission region in the source. The γγ-opacity constrains the Doppler factor δ γ ≥ 10 for the highest energy (15 GeV) photon observed by the Fermi-Large Area Telescopemore » (LAT). Causality arguments constrain the size of the emission region to 1.6 × 10 15 cm. The γ-ray spectra measured over this period show clear deviations from a simple power law with a break in the 1–2 GeV energy range. We discuss possible explanations for the origin of the γ-ray spectral breaks. Our study suggests that the γ-ray emission region in 3C 273 is located within the broad line region (< 1.6 pc). As a result, the spectral behavior and temporal characteristics of the individual flares indicate the presence of multiple shock scenarios at the base of the jet.« less

The development and issues of nursing education in China: a national data analysis.

PubMed

You, Li-ming; Ke, Ying-ying; Zheng, Jing; Wan, Li-hong

2015-02-01

The development of and the issues arising in the nursing educational sector as the provider for nursing workforce have drawn increasing attention. To describe the development of nursing education in mainland China and to analyze related issues. A retrospective, descriptive study with secondary data analysis. The scale and composition of nursing education programs from 2006 to 2012 in mainland China were analyzed, and changes in the scale of the nursing workforce from 2002 to 2013 were compared to facilitate an interpretation of nursing education. The scale of initial nursing education was large and expanded rapidly. In 2012, the total recruitment was 515,710, including 39,747 (7.71%) students training for a baccalaureate degree, 143,726 (27.87%) students training for an advanced diploma, and 332,237 (64.42%) students training in secondary diploma programs. The nursing workforce in China grew dramatically, with an increase of 120,000 to 286,000 nurses each year since 2006, but the nurse shortage remained existed (there were only 2.05 nurses per 1000 population, and the nurse to doctor ratio was 1:1 in 2013). The recruitment of nursing students per 1000 population was greater in the west (0.51) and middle (0.40) regions than in the east region (0.28), while the number of nurses per 1000 population had the opposite pattern (1.71, 1.75, and 2.02 nurses per 1000 population in the west, middle, and east regions, respectively) in 2012. Nursing education in China has developed rapidly, and some issues require attention. We suggest that initial nursing education be improved by increasing the recruitment to advanced diploma and baccalaureate programs and decreasing the recruitment to secondary diploma programs and by ensuring the quality of education. Multiple strategies should be taken to effectively raise the social status and prestige of the nursing profession and to ease the nurse shortage. Copyright © 2014 Elsevier Ltd. All rights reserved.

Spatial Patterns of Development Drive Water Use

NASA Astrophysics Data System (ADS)

Sanchez, G. M.; Smith, J. W.; Terando, A.; Sun, G.; Meentemeyer, R. K.

2018-03-01

Water availability is becoming more uncertain as human populations grow, cities expand into rural regions and the climate changes. In this study, we examine the functional relationship between water use and the spatial patterns of developed land across the rapidly growing region of the southeastern United States. We quantified the spatial pattern of developed land within census tract boundaries, including multiple metrics of density and configuration. Through non-spatial and spatial regression approaches we examined relationships and spatial dependencies between the spatial pattern metrics, socio-economic and environmental variables and two water use variables: a) domestic water use, and b) total development-related water use (a combination of public supply, domestic self-supply and industrial self-supply). Metrics describing the spatial patterns of development had the highest measure of relative importance (accounting for 53% of model's explanatory power), explaining significantly more variance in water use compared to socio-economic or environmental variables commonly used to estimate water use. Integrating metrics characterizing the spatial pattern of development into water use models is likely to increase their utility and could facilitate water-efficient land use planning.

Human-water interactions in Colorado: Evaluating the impacts of population growth, energy development and dynamic industries on water resource management

NASA Astrophysics Data System (ADS)

Hogue, Terri; Walker, Ella; Read, Laura

2016-04-01

The gap between water supply and demand is growing in the western U.S. due to climate change, rapid population growth, intensive agricultural production, wide-spread energy development and changing industrial use. Water conservation efforts among residential and industrial water users, recycling and reuse techniques, and innovative regulatory frameworks strive to mitigate this gap, however, the extent of these management strategies are often difficult to quantify and are typically not included in prediction of future water allocations. Water use on the eastern slope in Colorado (Denver-Metro region) is impacted by high-intensity activities, including unconventional energy development, large withdrawals for agriculture, and increasing demand for recreational industries. These demands are in addition to a projected population increase of 100% by 2050 in the South Platte River basin, which encompasses the Denver-Metro region. The current presentation focuses on the quantification of regional sector water use utilzing a range of observations and technologies (including remote sensing) and integration into a regional decision support system. We explore scenarios of future water use in the energy, agriculture, and municipal/industrial sectors, and discuss the potential water allocation tradeoffs to various stakeholders. We also employ climate projections to quantify the potential range of water availability under various scenarios and observe the extent to which future climate may influence regional management decisions.

Towards transdisciplinarity in Arctic sustainability knowledge co-production: Socially-Oriented Observations as a participatory integrated activity

NASA Astrophysics Data System (ADS)

Vlasova, Tatiana; Volkov, Sergey

2016-09-01

The paper is an attempt to tie together main biogeophysical and social science projects under the auspice of interdisciplinary sustainability science development. Special attention is put to the necessity of the transdisciplinary knowledge co-production based on activities and problem-solutions approaches. It puts attention to the role of monitoring activities in sustainability interdisciplinary science and transdisciplinary knowledge evolution in the Arctic. Socially focused monitoring named Socially-Oriented Observations creating a transdisciplinary space is viewed as one of sources of learning and transformations towards sustainability making possible to shape rapid changes happening in the Arctic based on sustainability knowledge co-production. Continuous Socially-Oriented Observations integrating scientific, education and monitoring methods enables to define adaptation and transformation pathways in the Arctic - the most rapidly changing region of our planet. Socially-Oriented Observations are based on the existing and developing interdisciplinary scientific approaches emerged within natural science and social science projects, sustainable development and resilience concepts putting principle attention to building sustainable and resilient socio-ecological systems. It is argued that the Arctic sustainability science is a valuable component of the whole and broader system of the Arctic Sustainability knowledge co-produced with the help of transdisciplinary approaches integrating science, local/traditional knowledge, entrepreneurship, education, decision-making. Socially-Oriented Observations are designed to be a transdisciplinary interactive continuous participatory process empowering deliberate choices of people that can shape the changes and enable transformation towards sustainability. Approaches of Socially-Oriented Observations and methods of implementation that have been developed since the IPY 2007/2008 and being practiced in different regions of the Arctic are discussed.

Barotropic Tidal Predictions and Validation in a Relocatable Modeling Environment. Revised

NASA Technical Reports Server (NTRS)

Mehra, Avichal; Passi, Ranjit; Kantha, Lakshmi; Payne, Steven; Brahmachari, Shuvobroto

1998-01-01

Under funding from the Office of Naval Research (ONR), the Mississippi State University Center for Air Sea Technology (CAST) has been working on developing a Relocatable Modeling Environment (RME) to provide a uniform and unbiased infrastructure for efficiently configuring numerical models in any geographic or oceanic region. Under Naval Oceanographic Office (NAVOCEANO) funding, the model was implemented and tested for NAVOCEANO use. With our current emphasis on ocean tidal modeling, CAST has adopted the Colorado University's numerical ocean model, known as CURReNTSS (Colorado University Rapidly Relocatable Nestable Storm Surge) Model, as the model of choice. During the RME development process, CURReNTSS has been relocated to several coastal oceanic regions, providing excellent results that demonstrate its veracity. This report documents the model validation results and provides a brief description of the Graphic user Interface.

Sketch on the structural geology and vulcanism in the Central High Plateau of the Bolivian Andes

NASA Technical Reports Server (NTRS)

Brockmann, C. E. (Principal Investigator)

1973-01-01

The author has identified the following significant results. The Earth Resources Technology Satellite Program has as an objective the development of tectonic maps for Bolivia. Maps were prepared using the images of ERTS-1 in a preliminary study of alignments observed and rapidly interpreted in images 1010-14033-3-4-5-6-7 on a scale of 1:1,000,000, and later verified on the ground with corresponding fault zones. This information was not shown on existing geologial maps. The ERTS-1 imagery was used in volcanology research for drawing the regional limits of volcanic formations as soon as the alignment and the extent of the volcanoes could be determined. The extensive coverage of ERTS-1 images provides an excellent opportunity for developing studies of regional structures.

Some assembly required: evolutionary and systems perspectives on the mammalian reproductive system.

PubMed

Mordhorst, Bethany R; Wilson, Miranda L; Conant, Gavin C

2016-01-01

In this review, we discuss the way that insights from evolutionary theory and systems biology shed light on form and function in mammalian reproductive systems. In the first part of the review, we contrast the rapid evolution seen in some reproductive genes with the generally conservative nature of development. We discuss directional selection and coevolution as potential drivers of rapid evolution in sperm and egg proteins. Such rapid change is very different from the highly conservative nature of later embryo development. However, it is not unique, as some regions of the sex chromosomes also show elevated rates of evolutionary change. To explain these contradictory trends, we argue that it is not reproductive functions per se that induce rapid evolution. Rather, it is the fact that biotic interactions, such as speciation events and sexual conflict, have no evolutionary endpoint and hence can drive continuous evolutionary changes. Returning to the question of sex chromosome evolution, we discuss the way that recent advances in evolutionary genomics and systems biology and, in particular, the development of a theory of gene balance provide a better understanding of the evolutionary patterns seen on these chromosomes. We end the review with a discussion of a surprising and incompletely understood phenomenon observed in early embryos: namely the Warburg effect, whereby glucose is fermented to lactate and alanine rather than respired to carbon dioxide. We argue that evolutionary insights, from both yeasts and tumor cells, help to explain the Warburg effect, and that new metabolic modeling approaches are useful in assessing the potential sources of the effect.

Resource management and operations in southwest South Dakota: Climate change scenario planning workshop summary January 20-21, 2016, Rapid City, SD

USGS Publications Warehouse

Fisichelli, Nicholas A.; Schuurman, Gregor W.; Symstad, Amy J.; Ray, Andrea; Miller, Brian; Cross, Molly; Rowland, Erika

2016-01-01

The Scaling Climate Change Adaptation in the Northern Great Plains through Regional Climate Summaries and Local Qualitative-Quantitative Scenario Planning Workshops project synthesizes climate data into 3-5 distinct but plausible climate summaries for the northern Great Plains region; crafts quantitative summaries of these climate futures for two focal areas; and applies these local summaries by developing climate-resource-management scenarios through participatory workshops and, where possible, simulation models. The two focal areas are central North Dakota and southwest South Dakota (Figure 1). The primary objective of this project is to help resource managers and scientists in a focal area use scenario planning to make management and planning decisions based on assessments of critical future uncertainties.This report summarizes project work for public and tribal lands in the southwest South Dakota grasslands focal area, with an emphasis on Badlands National Park and Buffalo Gap National Grassland. The report explains scenario planning as an adaptation tool in general, then describes how it was applied to the focal area in three phases. Priority resource management and climate uncertainties were identified in the orientation phase. Local climate summaries for relevant, divergent, and challenging climate scenarios were developed in the second phase. In the final phase, a two-day scenario planning workshop held January 20-21, 2016 in Rapid City, South Dakota, featured scenario development and implications, testing management decisions, and methods for operationalizing scenario planning outcomes.

Distribution and source analysis of heavy metal pollutants in sediments of a rapid developing urban river system.

PubMed

Xia, Fang; Qu, Liyin; Wang, Ting; Luo, Lili; Chen, Han; Dahlgren, Randy A; Zhang, Minghua; Mei, Kun; Huang, Hong

2018-09-01

Heavy metal pollution of aquatic environments in rapidly developing industrial regions is of considerable global concern due to its potential to cause serious harm to aquatic ecosystems and human health. This study assessed heavy metal contamination of sediments in a highly industrialized urban watershed of eastern China containing several historically unregulated manufacturing enterprises. Total concentrations and solid-phase fractionation of Cu, Zn, Pb, Cr and Cd were investigated for 39 river sediments using multivariate statistical analysis and geographically weighted regression (GWR) methods to quantitatively examine the relationship between land use and heavy metal pollution at the watershed scale. Results showed distinct spatial patterns of heavy metal contamination within the watershed, such as higher concentrations of Zn, Pb and Cd in the southwest and higher Cu concentration in the east, indicating links to specific pollution sources within the watershed. Correlation and PCA analyses revealed that Zn, Pb and Cd were dominantly contributed by anthropogenic activities; Cu originated from both industrial and agricultural sources; and Cr has been altered by recent pollution control strategies. The GWR model indicated that several heavy metal fractions were strongly correlated with industrial land proportion and this correlation varied with the level of industrialization as demonstrated by variations in local GWR R 2 values. This study provides important information for assessing heavy metal contaminated areas, identifying heavy metal pollutant sources, and developing regional-scale remediation strategies. Copyright © 2018 Elsevier Ltd. All rights reserved.

The interhemispheric CA1 circuit governs rapid generalisation but not fear memory.

PubMed

Zhou, Heng; Xiong, Gui-Jing; Jing, Liang; Song, Ning-Ning; Pu, De-Lin; Tang, Xun; He, Xiao-Bing; Xu, Fu-Qiang; Huang, Jing-Fei; Li, Ling-Jiang; Richter-Levin, Gal; Mao, Rong-Rong; Zhou, Qi-Xin; Ding, Yu-Qiang; Xu, Lin

2017-12-19

Encoding specificity theory predicts most effective recall by the original conditions at encoding, while generalization endows recall flexibly under circumstances which deviate from the originals. The CA1 regions have been implicated in memory and generalization but whether and which locally separated mechanisms are involved is not clear. We report here that fear memory is quickly formed, but generalization develops gradually over 24 h. Generalization but not fear memory is impaired by inhibiting ipsilateral (ips) or contralateral (con) CA1, and by optogenetic silencing of the ipsCA1 projections onto conCA1. By contrast, in vivo fEPSP recordings reveal that ipsCA1-conCA1 synaptic efficacy is increased with delay over 24 h when generalization is formed but it is unchanged if generalization is disrupted. Direct excitation of ipsCA1-conCA1 synapses using chemogenetic hM3Dq facilitates generalization formation. Thus, rapid generalization is an active process dependent on bilateral CA1 regions, and encoded by gradual synaptic learning in ipsCA1-conCA1 circuit.

Coastal livelihood transitions under globalization with implications for trans-ecosystem interactions.

PubMed

Kramer, Daniel B; Stevens, Kara; Williams, Nicholas E; Sistla, Seeta A; Roddy, Adam B; Urquhart, Gerald R

2017-01-01

Anthropogenic threats to natural systems can be exacerbated due to connectivity between marine, freshwater, and terrestrial ecosystems, complicating the already daunting task of governance across the land-sea interface. Globalization, including new access to markets, can change social-ecological, land-sea linkages via livelihood responses and adaptations by local people. As a first step in understanding these trans-ecosystem effects, we examined exit and entry decisions of artisanal fishers and smallholder farmers on the rapidly globalizing Caribbean coast of Nicaragua. We found that exit and entry decisions demonstrated clear temporal and spatial patterns and that these decisions differed by livelihood. In addition to household characteristics, livelihood exit and entry decisions were strongly affected by new access to regional and global markets. The natural resource implications of these livelihood decisions are potentially profound as they provide novel linkages and spatially-explicit feedbacks between terrestrial and marine ecosystems. Our findings support the need for more scientific inquiry in understanding trans-ecosystem tradeoffs due to linked-livelihood transitions as well as the need for a trans-ecosystem approach to natural resource management and development policy in rapidly changing coastal regions.

Climate change in Australian tropical rainforests: an impending environmental catastrophe.

PubMed

Williams, Stephen E; Bolitho, Elizabeth E; Fox, Samantha

2003-09-22

It is now widely accepted that global climate change is affecting many ecosystems around the globe and that its impact is increasing rapidly. Many studies predict that impacts will consist largely of shifts in latitudinal and altitudinal distributions. However, we demonstrate that the impacts of global climate change in the tropical rainforests of northeastern Australia have the potential to result in many extinctions. We develop bioclimatic models of spatial distribution for the regionally endemic rainforest vertebrates and use these models to predict the effects of climate warming on species distributions. Increasing temperature is predicted to result in significant reduction or complete loss of the core environment of all regionally endemic vertebrates. Extinction rates caused by the complete loss of core environments are likely to be severe, nonlinear, with losses increasing rapidly beyond an increase of 2 degrees C, and compounded by other climate-related impacts. Mountain ecosystems around the world, such as the Australian Wet Tropics bioregion, are very diverse, often with high levels of restricted endemism, and are therefore important areas of biodiversity. The results presented here suggest that these systems are severely threatened by climate change.

Antiretroviral drug regimens to prevent mother-to-child transmission of HIV: a review of scientific, program, and policy advances for sub-Saharan Africa.

PubMed

Chi, Benjamin H; Stringer, Jeffrey S A; Moodley, Dhayendre

2013-06-01

Considerable advances have been made in the effort to prevent mother-to-child HIV transmission (PMTCT) in sub-Saharan Africa. Clinical trials have demonstrated the efficacy of antiretroviral regimens to interrupt HIV transmission through the antenatal, intrapartum, and postnatal periods. Scientific discoveries have been rapidly translated into health policy, bolstered by substantial investment in health infrastructure capable of delivering increasingly complex services. A new scientific agenda is also emerging, one that is focused on the challenges of effective and sustainable program implementation. Finally, global campaigns to "virtually eliminate" pediatric HIV and dramatically reduce HIV-related maternal mortality have mobilized new resources and renewed political will. Each of these developments marks a major step in regional PMTCT efforts; their convergence signals a time of rapid progress in the field, characterized by an increased interdependency between clinical research, program implementation, and policy. In this review, we take stock of recent advances across each of these areas, highlighting the challenges--and opportunities--of improving health services for HIV-infected mothers and their children across the region.

Multiplex qPCR for reliable detection and differentiation of Burkholderia mallei and Burkholderia pseudomallei.

PubMed

Janse, Ingmar; Hamidjaja, Raditijo A; Hendriks, Amber C A; van Rotterdam, Bart J

2013-02-14

Burkholderia mallei and B. pseudomallei are two closely related species of highly virulent bacteria that can be difficult to detect. Pathogenic Burkholderia are endemic in many regions worldwide and cases of infection, sometimes brought by travelers from unsuspected regions, also occur elsewhere. Rapid, sensitive methods for identification of B. mallei and B. pseudomallei are urgently needed in the interests of patient treatment and epidemiological surveillance. Signature sequences for sensitive, specific detection of pathogenic Burkholderia based on published genomes were identified and a qPCR assay was designed and validated. A single-reaction quadruplex qPCR assay for the detection of pathogenic Burkholderia, which includes a marker for internal control of DNA extraction and amplification, was developed. The assay permits differentiation of B. mallei and B. pseudomallei strains, and probit analysis showed a very low detection limit. Use of a multicopy signature sequence permits detection of less than 1 genome equivalent per reaction. The new assay permits rapid detection of pathogenic Burkholderia and combines enhanced sensitivity, species differentiation, and inclusion of an internal control for both DNA extraction and PCR amplification.

HIV, international travel and tourism: global issues and Pacific perspectives.

PubMed

Lewis, N D; Bailey, J

AIDS, like plagues throughout human history, has been blamed repeatedly on foreigners. This has heightened ramifications, from the personal to the geopolitical, in an era of escalating population movement and rapid international travel. By the end of 1990, the World Health Organization had estimated that the total number of AIDS cases worldwide was close to 1.3 million. Recent estimates suggest that by the year 2000, 38-100 million adults and over 10 million children will have been infected with HIV. Seventy-five to eighty-five percent of that number will be from the developing world. AIDS has rapidly become pandemic, with wide-ranging consequences for humankind. Human population movement is an important component in the natural history of AIDS. With respect to this, a central consideration is the relationship between AIDS and international travel, especially tourism. In this paper, after reviewing HIV in the Asia-Pacific region, we present the epidemiology of HIV in the Pacific Islands, discuss its impact with particular reference to population movement, and explore some of the specific challenges that the Pacific Island region faces.

Western Washington and Oregon Community Tree Guide: Benefits, Costs and Strategic Planting

Treesearch

E.G. McPherson; S.E. Maco; J.R. Simpson; P.J. Peper; Q. Xiao; A. VanDerZanden; N. Bell

2002-01-01

Communities in Western Washington and Oregon include nearly 7.4 million people (State of Washington 2001, US Census Bureau 2001) comprising almost 80% of the states’ total populations. The region’s rapid growth, development, and increasing congestion belie the area’s verdant repute. Forests continue to be a quintessential component of the Pacific Northwest’s economic,...

Efficient Ultraviolet Light Detector Based on a Crystalline Viologen-Based Metal-Organic Framework with Rapid Visible Color Change under Irradiation.

PubMed

Hu, Shuzhi; Zhang, Jie; Chen, Shuhuang; Dai, Jingcao; Fu, Zhiyong

2017-11-22

A convenient colorimetric molecular system constructed by the zinc viologen-carboxylate framework is developed for naked eye detection of instantaneous UV exposure levels. Only narrow-band absorption in UV regions and a unique interpenetrated structure of its colorless crystal enable the system to give a fast response toward UV irradiance with intensity as low as 0.001 mw/cm 2 .

Research and Development of a Convertible Use Rapidly Expandable Model for Response to Disasters and Mass Casualties

DTIC Science & Technology

2009-10-01

Local health departments and communities must be prepared to address gaps where the capacity of healthcare systems is exceeded. 6 The...team to identify and understand gaps in available assets. Resources evaluated included regional hospitals, plans for patient care surge capacity...Tracking certain prescription purchases can yield clues to a new disease outbreak in the community. Software to evaluate for trends can monitor

The climate-water-health nexus in emerging megacities

NASA Astrophysics Data System (ADS)

Akanda, Ali Shafqat; Hossain, Faisal

2012-09-01

Today a handful of developing nations (India, China, Nigeria, Brazil, Bangladesh, Indonesia, and Pakistan) account for more than half of the world's population. A majority of these nations are rapidly urbanizing, as people from remote regions migrate in search of economic prosperity [Cohen, 2003]. Such a rural-to-urban migratory trend has been the leading cause of cities expanding to megacities, which are defined by the United Nations as cities with a population greater than 10 million. By 2025 a greater proportion of the world's megacities, most of them situated in low-lying coastal areas, will be in developing nations in Asia and Africa (Figure 1a) [Asian Development Bank, 2012].

Establishing a Regional Nitrogen Management Approach to Mitigate Greenhouse Gas Emission Intensity from Intensive Smallholder Maize Production

PubMed Central

Wu, Liang; Chen, Xinping; Cui, Zhenling; Zhang, Weifeng; Zhang, Fusuo

2014-01-01

The overuse of Nitrogen (N) fertilizers on smallholder farms in rapidly developing countries has increased greenhouse gas (GHG) emissions and accelerated global N consumption over the past 20 years. In this study, a regional N management approach was developed based on the cost of the agricultural response to N application rates from 1,726 on-farm experiments to optimize N management across 12 agroecological subregions in the intensive Chinese smallholder maize belt. The grain yield and GHG emission intensity of this regional N management approach was investigated and compared to field-specific N management and farmers' practices. The regional N rate ranged from 150 to 219 kg N ha−1 for the 12 agroecological subregions. Grain yields and GHG emission intensities were consistent with this regional N management approach compared to field-specific N management, which indicated that this regional N rate was close to the economically optimal N application. This regional N management approach, if widely adopted in China, could reduce N fertilizer use by more than 1.4 MT per year, increase maize production by 31.9 MT annually, and reduce annual GHG emissions by 18.6 MT. This regional N management approach can minimize net N losses and reduce GHG emission intensity from over- and underapplications, and therefore can also be used as a reference point for regional agricultural extension employees where soil and/or plant N monitoring is lacking. PMID:24875747

High Resolution Melting Analysis for Rapid Mutation Screening in Gyrase and Topoisomerase IV Genes in Quinolone-Resistant Salmonella enterica

PubMed Central

Thong, Kwai Lin

2014-01-01

The increased Salmonella resistance to quinolones and fluoroquinolones is a public health concern in the Southeast Asian region. The objective of this study is to develop a high resolution melt curve (HRM) assay to rapidly screen for mutations in quinolone-resistant determining region (QRDR) of gyrase and topoisomerase IV genes. DNA sequencing was performed on 62 Salmonella strains to identify mutations in the QRDR of gyrA, gyrB, parC, and parE genes. Mutations were detected in QRDR of gyrA (n = 52; S83F, S83Y, S83I, D87G, D87Y, and D87N) and parE (n = 1; M438I). Salmonella strains with mutations within QRDR of gyrA are generally more resistant to nalidixic acid (MIC 16 > 256 μg/mL). Mutations were uncommon within the QRDR of gyrB, parC, and parE genes. In the HRM assay, mutants can be distinguished from the wild-type strains based on the transition of melt curves, which is more prominent when the profiles are displayed in difference plot. In conclusion, HRM analysis allows for rapid screening for mutations at the QRDRs of gyrase and topoisomerase IV genes in Salmonella. This assay markedly reduced the sequencing effort involved in mutational studies of quinolone-resistance genes. PMID:25371903

Monitoring the Earthquake source process in North America

USGS Publications Warehouse

Herrmann, Robert B.; Benz, H.; Ammon, C.J.

2011-01-01

With the implementation of the USGS National Earthquake Information Center Prompt Assessment of Global Earthquakes for Response system (PAGER), rapid determination of earthquake moment magnitude is essential, especially for earthquakes that are felt within the contiguous United States. We report an implementation of moment tensor processing for application to broad, seismically active areas of North America. This effort focuses on the selection of regional crustal velocity models, codification of data quality tests, and the development of procedures for rapid computation of the seismic moment tensor. We systematically apply these techniques to earthquakes with reported magnitude greater than 3.5 in continental North America that are not associated with a tectonic plate boundary. Using the 0.02-0.10 Hz passband, we can usually determine, with few exceptions, moment tensor solutions for earthquakes with M w as small as 3.7. The threshold is significantly influenced by the density of stations, the location of the earthquake relative to the seismic stations and, of course, the signal-to-noise ratio. With the existing permanent broadband stations in North America operated for rapid earthquake response, the seismic moment tensor of most earthquakes that are M w 4 or larger can be routinely computed. As expected the nonuniform spatial pattern of these solutions reflects the seismicity pattern. However, the orientation of the direction of maximum compressive stress and the predominant style of faulting is spatially coherent across large regions of the continent.

High resolution melting analysis for rapid mutation screening in gyrase and Topoisomerase IV genes in quinolone-resistant Salmonella enterica.

PubMed

Ngoi, Soo Tein; Thong, Kwai Lin

2014-01-01

The increased Salmonella resistance to quinolones and fluoroquinolones is a public health concern in the Southeast Asian region. The objective of this study is to develop a high resolution melt curve (HRM) assay to rapidly screen for mutations in quinolone-resistant determining region (QRDR) of gyrase and topoisomerase IV genes. DNA sequencing was performed on 62 Salmonella strains to identify mutations in the QRDR of gyrA, gyrB, parC, and parE genes. Mutations were detected in QRDR of gyrA (n = 52; S83F, S83Y, S83I, D87G, D87Y, and D87N) and parE (n = 1; M438I). Salmonella strains with mutations within QRDR of gyrA are generally more resistant to nalidixic acid (MIC 16 > 256 μg/mL). Mutations were uncommon within the QRDR of gyrB, parC, and parE genes. In the HRM assay, mutants can be distinguished from the wild-type strains based on the transition of melt curves, which is more prominent when the profiles are displayed in difference plot. In conclusion, HRM analysis allows for rapid screening for mutations at the QRDRs of gyrase and topoisomerase IV genes in Salmonella. This assay markedly reduced the sequencing effort involved in mutational studies of quinolone-resistance genes.

A DNA Barcode-Based RPA Assay (BAR-RPA) for Rapid Identification of the Dry Root of Ficus hirta (Wuzhimaotao).

PubMed

Tian, Enwei; Liu, Qianqian; Ye, Haoting; Li, Fang; Chao, Zhi

2017-12-18

Background: Wuzhimaotao (the dry root of Ficus hirta ) is used as both medicine and food ingredient by the locals in areas around Nanling Mountains of China. Due to its very similar external morphologies with Duanchangcao (the root of Gelsemium elegans , which contains gelsemine that is extremely neurotoxic) and the associated growth of these two plants, incidents of food poisoning and even death frequently occur, resulting from the misuse of Duanchangcao as Wuzhimaotao. The aim of this study is to develop a fast, even, on-spot approach to identification of Wuzhimaotao. Methods: We used DNA barcode-based recombinase polymerase amplification (BAR-RPA) with species-specific primers targeting the internal transcribed spacer (ITS) region of the rDNA of F. hirta. BAR-RPA reaction time and temperature were optimized and the specificity and sensitivity of BAR-RPA species-specific primers were assessed. Results: This technique showed a high specificity and sensitivity to amplify the genomic DNA of F. hirta and allowed for rapid amplification (within 15 min) of the ITS region under a constant and mild temperature range of 37-42 °C without using thermocyclers. Conclusions: The BAR-RPA assay with a fast DNA extraction protocol provides a simple, energy-saving, and rapid method for identification of Wuzhimaotao in both laboratory and field settings.

Topographic Slope as a Proxy for Seismic Site-Conditions (VS30) and Amplification Around the Globe

USGS Publications Warehouse

Allen, Trevor I.; Wald, David J.

2007-01-01

Executive Summary It is well-known that large global earthquakes can have a dramatic effect on local communities and the built environment. Moreover, ground motions amplified by surficial materials can exacerbate the situation, often making the difference between minor and major damage. For a real-time earthquake impact alert system, such as Prompt Assessment of Global Earthquakes for Response (PAGER) (Wald and others, 2006), we seek to rapidly evaluate potential ground shaking in the source region and subsequently provide an estimate of the population exposure to potentially fatal levels of ground shaking in any region of the world. The contribution of surficial geology (particularly soft sediments) to the amplification of ground shaking is an important component in predicting the levels of ground motion observed at any site. Unfortunately, the availability of information regarding seismic siteconditions is only available at a few sites around the globe. Herein, we describe a methodology for deriving maps of seismic site-conditions anywhere in the world using topographic slope as a proxy. Average shear-velocity down to 30 m (or VS30) measurements are correlated against topographic slope to develop two sets of coefficients for predicting VS30: one for active tectonic regions that possess dynamic topographic relief, and one for stable continental regions where changes in topography are more subdued. These coefficients have been applied to the continental United States, in addition to other regions around the world. They are subsequently compared to existing site-condition maps based on geology and observed VS30 measurements, where available. The application of the topographic slope method in regions with abundant VS30 measurements (for example California, Memphis, and Taiwan) indicates that this method provides site condition-maps of similar quality, or in some cases, maps superior to those developed from more traditional techniques. Having a first-order assessment of seismic site-conditions anywhere in the world provides a valuable tool to rapidly estimate ground motions following any global earthquake, the primary motivation for this research. These VS30 maps will enable us to better quantify possible ground shaking and rapidly deliver these predictions to emergency managers and responders. In addition, the VS30 maps for the globe will also have practical applications for numerous related probabilistic- and scenario-based studies. To date, several researchers have requested maps or have used the approach outlined herein for their own applications (for example Cagnan and Kariptas, written commun., 2007; Harmandar and others, 2007). Given that we anticipate a significant demand for these products, we have developed an internet delivery service so that users can download maps and grids of seismic site-conditions for specified regions. To some extent, these grids can also be customized by the user if they disagree with the predefined correlations derived using the methodologies described within this report. Finally, this report represents a more comprehensive account of this technique and provides a more fully illustrated global description of results than that given in Wald and Allen (2007), which has been accepted for publication in the Bulletin of the Seismological Society of America.

Blood lead level is associated with non-alcoholic fatty liver disease in the Yangtze River Delta region of China in the context of rapid urbanization.

PubMed

Zhai, Hualing; Chen, Chi; Wang, Ningjian; Chen, Yi; Nie, Xiaomin; Han, Bing; Li, Qin; Xia, Fangzhen; Lu, Yingli

2017-08-31

China has undergone rapid urbanization in the past three decades. We aimed to report blood lead level (B-Pb) in the most rapidly urbanized Yangtze River Delta Region of China, and explore the association B-Pb and non-alcoholic fatty liver disease (NAFLD). Our data source was the SPECT-China study. We enrolled 2011 subjects from 6 villages in the Yangtze River Delta Region. Lead was measured by atomic absorption spectrometry. According to abdominal ultrasound, residents were divided into normal and NAFLD groups. In total, 824 (41.0%) were diagnosed with NAFLD. Medians (interquartile range) of B-Pb were 5.29 μg/dL (3.60-7.28) [0.25 μmol/L (0.17-0.35)] for men and 4.49 μg/dL (2.97-6.59) [0.22 μmol/L (0.14-0.32)] for women. In both genders, the NAFLD group had significantly greater B-Pb than normal group (both P < 0.001). The prevalence of NAFLD significantly increased with increasing B-Pb quartiles in men (P for trend = 0.032) and women (P for trend = 0.001). Residents in Shanghai had significantly greater B-Pb (P < 0.001) and a higher prevalence of NAFLD (P < 0.001). Compared with women in the lowest quartile of BLL, OR of NAFLD in women in the highest quartile was 1.613 (95%CI 1.082-2.405) (P for trend = 0.019) after multivariable adjustment. In men, this association showed marginal significance (OR 2.168, 95%CI 0.989-4.750, P for trend = 0.063). B-Pb in Chinese residents in the Yangtze River Delta Region were much higher than in developed countries. Elevated B-Pb was associated with an increased risk of NAFLD, especially in women.

Effect of rapid warming of boar semen on sperm morphology and physiology.

PubMed

Bamba, K; Cran, D G

1985-09-01

The effect of rapid dilution (1:8 with BTS or 1:6.5 with KRP) and temperature change on sperm morphology and physiology were studied using boar spermatozoa pre-diluted in BF5 diluent. Rapid dilution of cold semen (5 degrees C) with a warm solution (37 degrees C) caused marked acrosomal changes which were most prominent in the anterior region. The acrosomal damage appeared to be caused mainly by rapid warming. In contrast to rapid cooling, rapid warming had little effect upon motility, glutamic-oxaloacetic transaminase release and respiration.

The evolution of agricultural intensification and environmental degradation in the UK: a data-driven systems dynamics approach

NASA Astrophysics Data System (ADS)

Armstrong McKay, David I.; Dearing, John A.; Dyke, James G.; Poppy, Guy; Firbank, Les

2016-04-01

The world's population continues to grow rapidly, yet the current demand for food is already resulting in environmental degradation in many regions. As a result, an emerging challenge of the 21st century is how agriculture can simultaneously undergo sustainable intensification and be made more resilient to accelerating climate change. Key to this challenge is: a) finding the "safe and just operating space" for the global agri-environment system that both provides sufficient food for humanity and avoids crossing dangerous planetary boundaries, and b) downscaling this framework from a planetary to a regional scale in order to better inform decision making and incorporate regional dynamics within the planetary boundaries framework. Regional safe operating spaces can be defined and explored using a combination of metrics that indicate the changing status of ecosystem services (both provisioning and regulating), statistical techniques that reveal early warning signals and breakpoints, and dynamical system models of the regional agri-environment system. Initial attempts to apply this methodology have been made in developing countries (e.g. China [Dearing et al., 2012, 2014; Zhang et al., 2015]), but have not yet been attempted in more developed countries, for example the UK. In this study we assess the changes in ecosystem services in two contrasting agricultural regions in the UK, arable-dominated East England and pastoral-dominated South-West England, since the middle of the 20th Century. We identify and establish proxies and indices of various provisioning and regulating services in these two regions and analyse how these have changed over this time. We find that significant degradation of regulating services occurred in Eastern England in the early 1980s, reflecting a period of rapid intensification and escalating fertiliser usage, but that regulating services have begun to recover since 2000 mainly as a result of fertiliser usage decoupling from increasing wheat yield. Soil erosion / suspended sediment transport and atmospheric pollution have also declined, but some biodiversity degradation metrics continue to rise. Environmental degradation resulting from agriculture in this region appears to have followed the trajectory of an Environmental Kuznets Curve, with recent years showing that regional GDP growth has begun to decouple from ecological deterioration. The history of South-West England is complicated by the significant drop in livestock density as a result of the 2001 foot-and-mouth disease outbreak and highly variable erosion data, but in general a similar pattern of increasing degradation in the 1980s and a gradual recovery since ~2000 is observed. Data with higher spatial and temporal resolution is required in order to further investigate the differing behaviour of the agri-environment system in each region. Based on this analysis, the preliminary results of a prototype dynamical systems model of regional agri-environment systems in the UK is also presented. Further development of this model will enhance our ability to identify regional social-ecological system boundaries and to detect the potential presence of tipping points within them.

Nuclear modification factor RCP for φ meson production in d+Au collisions at √SNN=200 GeV measured by the PHENIX experiment at RHIC

NASA Astrophysics Data System (ADS)

Guo, Lei

2009-10-01

In d+Au collisions, vector mesons produced in hard scattering are sensitive to various nuclear effects such as parton shadowing/saturation in the small x region (forward rapidity) leading to suppression, and antishadowing (large x region, backward rapidity) or the Cronin effect which both can produce enhancement. Since approaches such as the Color Glass Condensate (CGC) and pQCD-based Glauber-Eikonal models do not agree on the nature of these nuclear effects on particle production at large rapidity, it is essential that they be tested with experimental data in this kinematic regime. Knowledge of the difference between the forward and backward rapidity regions, in d+Au collisions, could also be used to separate the initial-state nuclear wave function modifications and final state in-medium effects in Au+Au collisions. In addition, the relative ratio for the production of ρ, φ and φ can provide information on the production mechanisms of light vector mesons. The PHENIX collaboration at RHIC has recently collected data in d+Au collisions at √s=200 GeV during the 2008 run. The latest work on the RCP measurements of φ, through the di-muon decays at forward and backward rapidities (1.2<η<2.2), will be discussed.

Rapidity distributions of hadrons in the HydHSD hybrid model

DOE Office of Scientific and Technical Information (OSTI.GOV)

Khvorostukhin, A. S., E-mail: hvorost@theor.jinr.ru; Toneev, V. D.

2017-03-15

A multistage hybrid model intended for describing heavy-ion interactions in the energy region of the NICA collider under construction in Dubna is proposed. The model combines the initial, fast, interaction stage described by the model of hadron string dynamics (HSD) and the subsequent evolution that the expanding system formed at the first stage experiences at the second stage and which one treats on the basis of ideal hydrodynamics; after the completion of the second stage, the particles involved may still undergo rescattering (third interaction stage). The model admits three freeze-out scenarios: isochronous, isothermal, and isoenergetic. Generally, the HydHSD hybrid modelmore » developed in the present study provides fairly good agreement with available experimental data on proton rapidity spectra. It is shown that, within this hybrid model, the two-humped structure of proton rapidity distributions can be obtained either by increasing the freeze-out temperature and energy density or by more lately going over to the hydrodynamic stage. Although the proposed hybrid model reproduces rapidity spectra of protons, it is unable to describe rapidity distributions of pions, systematically underestimating their yield. It is necessary to refine the model by including viscosity effects at the hydrodynamic stage of evolution of the system and by considering in more detail the third interaction stage.« less

Identification and determination of the saikosaponins in Radix bupleuri by accelerated solvent extraction combined with rapid-resolution LC-MS.

PubMed

Yang, Yun-Yun; Tang, You-Zhi; Fan, Chun-Lin; Luo, Hui-Tai; Guo, Peng-Ran; Chen, Jian-Xin

2010-07-01

A method based on accelerated solvent extraction combined with rapid-resolution LC-MS for efficient extraction, rapid separation, online identification and accurate determination of the saikosaponins (SSs) in Radix bupleuri (RB) was developed. The RB samples were extracted by accelerated solvent extraction using 70% aqueous ethanol v/v as solvent, at a temperature of 120 degrees C and pressure of 100 bar, with 10 min of static extraction time and three extraction cycles. Rapid-resolution LC separation was performed by using a C(18) column at gradient elution of water (containing 0.5% formic acid) and acetonitrile, and the major constituents were well separated within 20 min. A TOF-MS and an IT-MS were used for online identification of the major constituents, and 27 SSs were identified or tentatively identified. Five major bioactive SSs (SSa, SSc, SSd, 6''-O-acetyl-SSa and 6''-O-acetyl-SSd) with obvious peak areas and good resolution were chosen as benchmark substances, and a triple quadrupole MS operating in multiple-reaction monitoring mode was used for their quantitative analysis. A total of 16 RB samples from different regions of China were analyzed. The results indicated that the method was rapid, efficient, accurate and suitable for use in the quality control of RB.

Rapidity distributions of hadrons in the HydHSD hybrid model

NASA Astrophysics Data System (ADS)

Khvorostukhin, A. S.; Toneev, V. D.

2017-03-01

A multistage hybrid model intended for describing heavy-ion interactions in the energy region of the NICA collider under construction in Dubna is proposed. The model combines the initial, fast, interaction stage described by the model of hadron string dynamics (HSD) and the subsequent evolution that the expanding system formed at the first stage experiences at the second stage and which one treats on the basis of ideal hydrodynamics; after the completion of the second stage, the particles involved may still undergo rescattering (third interaction stage). The model admits three freeze-out scenarios: isochronous, isothermal, and isoenergetic. Generally, the HydHSD hybrid model developed in the present study provides fairly good agreement with available experimental data on proton rapidity spectra. It is shown that, within this hybrid model, the two-humped structure of proton rapidity distributions can be obtained either by increasing the freeze-out temperature and energy density or by more lately going over to the hydrodynamic stage. Although the proposed hybrid model reproduces rapidity spectra of protons, it is unable to describe rapidity distributions of pions, systematically underestimating their yield. It is necessary to refine the model by including viscosity effects at the hydrodynamic stage of evolution of the system and by considering in more detail the third interaction stage.

Aerodynamics inside a rapid compression machine

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mittal, Gaurav; Sung, Chih-Jen

2006-04-15

The aerodynamics inside a rapid compression machine after the end of compression is investigated using planar laser-induced fluorescence (PLIF) of acetone. To study the effect of reaction chamber configuration on the resulting aerodynamics and temperature field, experiments are conducted and compared using a creviced piston and a flat piston under varying conditions. Results show that the flat piston design leads to significant mixing of the cold vortex with the hot core region, which causes alternate hot and cold regions inside the combustion chamber. At higher pressures, the effect of the vortex is reduced. The creviced piston head configuration is demonstratedmore » to result in drastic reduction of the effect of the vortex. Experimental conditions are also simulated using the Star-CD computational fluid dynamics package. Computed results closely match with experimental observation. Numerical results indicate that with a flat piston design, gas velocity after compression is very high and the core region shrinks quickly due to rapid entrainment of cold gases. Whereas, for a creviced piston head design, gas velocity after compression is significantly lower and the core region remains unaffected for a long duration. As a consequence, for the flat piston, adiabatic core assumption can significantly overpredict the maximum temperature after the end of compression. For the creviced piston, the adiabatic core assumption is found to be valid even up to 100 ms after compression. This work therefore experimentally and numerically substantiates the importance of piston head design for achieving a homogeneous core region inside a rapid compression machine. (author)« less

[Comparition of ecological security stress effects of artificial landscapes on natural landscapes in different rapid urban sprawl areas].

PubMed

Lin, Mei Xia; Lin, Tao; Qiu, Quan Yi; Sun, Cai Ge; Deng, Fu Liang; Zhang, Guo Qin

2017-04-18

The expansion of built-up area will cause stress effect on the regional natural ecological security pattern during urbanization process. Taking rapid expanding regions of four inland and coastal cities as study areas, including Tongzhou in Beijing, Zhengding in Hebei, Tanggu in Tianjin and Xiamen in Fujian, we constructed regional landscape stress indexes according to the principle of landscape ecology and comparatively analyzed the landscape pattern characteristics of rapid expanding regions and the differences of stress effect of artificial landscapes on four natural landscapes ecological security pattern in the process of rapid urbanization. Results showed that landscape erosion indexes of Tongzhou, Zhengding, Tanggu and Xiamen in 2015 were 1.039, 0.996, 1.239 and 0.945, respectively, which indicated that the natural landscapes were eroded significantly. Natural landscape types of those four regions presented different threatened levels. Among all natural landscape types, unused land and waters were worst threatened in Tongzhou, Zhengding and Tanggu, while in Xiamen cultivated land and waters showed the highest threat levels. The waters threat indexes of those four areas were all more than 0.743. Landscape isolation indexes of waters and unused land of the inland cities were greater than those of coastal cities, which meant water distribution of inland cities in the space was less gathered than that of coastal cities. Besides, compared with the other natural landscape, unused land and waters suffered the largest stress from artificial landscapes.

Dielectron azimuthal anisotropy at mid-rapidity in Au + Au collisions at s N N = 200 GeV

DOE Office of Scientific and Technical Information (OSTI.GOV)

Adamczyk, L.; Adkins, J. K.; Agakishiev, G.

We report on the first measurement of the azimuthal anisotropy (v2) of dielectrons (e+e- pairs) at mid-rapidity from √sNN=200 GeV Au + Au collisions with the STAR detector at the Relativistic Heavy Ion Collider (RHIC), presented as a function of transverse momentum (pT) for different invariant-mass regions. In the mass region Mee<1.1 GeV/c2 the dielectron v2 measurements are found to be consistent with expectations from π0,η,ω, and Φ decay contributions. In the mass region 1.1

Optimized holographic femtosecond laser patterning method towards rapid integration of high-quality functional devices in microchannels.

PubMed

Zhang, Chenchu; Hu, Yanlei; Du, Wenqiang; Wu, Peichao; Rao, Shenglong; Cai, Ze; Lao, Zhaoxin; Xu, Bing; Ni, Jincheng; Li, Jiawen; Zhao, Gang; Wu, Dong; Chu, Jiaru; Sugioka, Koji

2016-09-13

Rapid integration of high-quality functional devices in microchannels is in highly demand for miniature lab-on-a-chip applications. This paper demonstrates the embellishment of existing microfluidic devices with integrated micropatterns via femtosecond laser MRAF-based holographic patterning (MHP) microfabrication, which proves two-photon polymerization (TPP) based on spatial light modulator (SLM) to be a rapid and powerful technology for chip functionalization. Optimized mixed region amplitude freedom (MRAF) algorithm has been used to generate high-quality shaped focus field. Base on the optimized parameters, a single-exposure approach is developed to fabricate 200 × 200 μm microstructure arrays in less than 240 ms. Moreover, microtraps, QR code and letters are integrated into a microdevice by the advanced method for particles capture and device identification. These results indicate that such a holographic laser embellishment of microfluidic devices is simple, flexible and easy to access, which has great potential in lab-on-a-chip applications of biological culture, chemical analyses and optofluidic devices.

Optimized holographic femtosecond laser patterning method towards rapid integration of high-quality functional devices in microchannels

NASA Astrophysics Data System (ADS)

Zhang, Chenchu; Hu, Yanlei; Du, Wenqiang; Wu, Peichao; Rao, Shenglong; Cai, Ze; Lao, Zhaoxin; Xu, Bing; Ni, Jincheng; Li, Jiawen; Zhao, Gang; Wu, Dong; Chu, Jiaru; Sugioka, Koji

2016-09-01

Rapid integration of high-quality functional devices in microchannels is in highly demand for miniature lab-on-a-chip applications. This paper demonstrates the embellishment of existing microfluidic devices with integrated micropatterns via femtosecond laser MRAF-based holographic patterning (MHP) microfabrication, which proves two-photon polymerization (TPP) based on spatial light modulator (SLM) to be a rapid and powerful technology for chip functionalization. Optimized mixed region amplitude freedom (MRAF) algorithm has been used to generate high-quality shaped focus field. Base on the optimized parameters, a single-exposure approach is developed to fabricate 200 × 200 μm microstructure arrays in less than 240 ms. Moreover, microtraps, QR code and letters are integrated into a microdevice by the advanced method for particles capture and device identification. These results indicate that such a holographic laser embellishment of microfluidic devices is simple, flexible and easy to access, which has great potential in lab-on-a-chip applications of biological culture, chemical analyses and optofluidic devices.

Rathke cleft cyst in seven-year-old girl presenting with central diabetes insipidus and review of literature.

PubMed

Evliyaoglu, Olcay; Evliyaoglu, Cetin; Ayva, Sebnem

2010-05-01

Rathke cleft cysts (RCC) are benign cysts derived from remnants of Rathke cleft, and are rarely symptomatic in children. Symptoms due to RCC are associated with mass effect and pituitary hormone deficiencies. Slow growth rate of the cyst makes its incidence increase with aging. Here we report on a seven-year-old girl who presented with central diabetes insipidus (CDI). Her sella MRI revealed a lesion in the sellar region which grew rapidly in follow-up. She underwent microneurosurgical operation and the lesion was totally excised. Pathologic examination revealed RCC with degenerative changes. In her follow-up, growth hormone deficiency developed in addition to arginine vasopressin deficiency. Rapid growth of the cyst is not the usual course of RCC's. Mechanisms regarding the cyst growth are unclear as they are in this case. This is the youngest child to date presenting with central diabetes insipidus due to RCC. Rapid growth of RCC can cause CDI in young children.

A pH-activatable nanoparticle with signal-amplification capabilities for non-invasive imaging of tumour malignancy.

PubMed

Mi, Peng; Kokuryo, Daisuke; Cabral, Horacio; Wu, Hailiang; Terada, Yasuko; Saga, Tsuneo; Aoki, Ichio; Nishiyama, Nobuhiro; Kataoka, Kazunori

2016-08-01

Engineered nanoparticles that respond to pathophysiological parameters, such as pH or redox potential, have been developed as contrast agents for the magnetic resonance imaging (MRI) of tumours. However, beyond anatomic assessment, contrast agents that can sense these pathological parameters and rapidly amplify their magnetic resonance signals are desirable because they could potentially be used to monitor the biological processes of tumours and improve cancer diagnosis. Here, we report an MRI contrast agent that rapidly amplifies magnetic resonance signals in response to pH. We confined Mn(2+) within pH-sensitive calcium phosphate (CaP) nanoparticles comprising a poly(ethylene glycol) shell. At a low pH, such as in solid tumours, the CaP disintegrates and releases Mn(2+) ions. Binding to proteins increases the relaxivity of Mn(2+) and enhances the contrast. We show that these nanoparticles could rapidly and selectively brighten solid tumours, identify hypoxic regions within the tumour mass and detect invisible millimetre-sized metastatic tumours in the liver.

Rapid underway profiling of water quality in Queensland estuaries.

PubMed

Hodge, Jonathan; Longstaff, Ben; Steven, Andy; Thornton, Phillip; Ellis, Peter; McKelvie, Ian

2005-01-01

We present an overview of a portable underway water quality monitoring system (RUM-Rapid Underway Monitoring), developed by integrating several off-the-shelf water quality instruments to provide rapid, comprehensive, and spatially referenced 'snapshots' of water quality conditions. We demonstrate the utility of the system from studies in the Northern Great Barrier Reef (Daintree River) and the Moreton Bay region. The Brisbane dataset highlights RUM's utility in characterising plumes as well as its ability to identify the smaller scale structure of large areas. RUM is shown to be particularly useful when measuring indicators with large small-scale variability such as turbidity and chlorophyll-a. Additionally, the Daintree dataset shows the ability to integrate other technologies, resulting in a more comprehensive analysis, whilst sampling offshore highlights some of the analytical issues required for sampling low concentration data. RUM is a low cost, highly flexible solution that can be modified for use in any water type, on most vessels and is only limited by the available monitoring technologies.

A pH-activatable nanoparticle with signal-amplification capabilities for non-invasive imaging of tumour malignancy

NASA Astrophysics Data System (ADS)

Mi, Peng; Kokuryo, Daisuke; Cabral, Horacio; Wu, Hailiang; Terada, Yasuko; Saga, Tsuneo; Aoki, Ichio; Nishiyama, Nobuhiro; Kataoka, Kazunori

2016-08-01

Engineered nanoparticles that respond to pathophysiological parameters, such as pH or redox potential, have been developed as contrast agents for the magnetic resonance imaging (MRI) of tumours. However, beyond anatomic assessment, contrast agents that can sense these pathological parameters and rapidly amplify their magnetic resonance signals are desirable because they could potentially be used to monitor the biological processes of tumours and improve cancer diagnosis. Here, we report an MRI contrast agent that rapidly amplifies magnetic resonance signals in response to pH. We confined Mn2+ within pH-sensitive calcium phosphate (CaP) nanoparticles comprising a poly(ethylene glycol) shell. At a low pH, such as in solid tumours, the CaP disintegrates and releases Mn2+ ions. Binding to proteins increases the relaxivity of Mn2+ and enhances the contrast. We show that these nanoparticles could rapidly and selectively brighten solid tumours, identify hypoxic regions within the tumour mass and detect invisible millimetre-sized metastatic tumours in the liver.

Rapid in situ identification of bioactive compounds in plants by in vivo nanospray high-resolution mass spectrometry.

PubMed

Chang, Qing; Peng, Yue'e; Dan, Conghui; Shuai, Qin; Hu, Shenghong

2015-03-25

A method for the rapid in situ identification of bioactive compounds in fresh plants has been developed using in vivo nanospray coupled to high-resolution mass spectrometry (HR-MS). Using a homemade in vivo nanospray ion source, the plant liquid was drawn out from a target region and ionized in situ. The ionized bioactive compounds were then identified using Q-Orbitrap HR-MS. The accurate mass measurements of these bioactive compounds were performed by full-scan or selected ion monitoring (SIM), and tandem mass spectrometry (MS/MS) was used in the structural elucidation. Without sample pretreatment, 12 bioactive compounds in 7 different plant species were identified, namely, isoalliin in onion; butylphthalide in celery; N-methylpelletierine, pelletierine, and pseudopelletierine in pomegranate; chlorogenic acid in crabapple; solamargine, solasonine, and solasodine in nightshade; aloin and aloe-emodin in aloe; and menthone in mint. This work demonstrates that in vivo nanospray HR-MS is a good method for rapid in situ identification of bioactive compounds in plants.

The long-term label retaining population of the renal papilla arises through divergent regional growth of the kidney.

PubMed

Adams, Derek C; Oxburgh, Leif

2009-09-01

Long-term pulse chase experiments previously identified a sizable population of BrdU-retaining cells within the renal papilla. The origin of these cells has been unclear, and in this work we test the hypothesis that they become quiescent early during the course of kidney development and organ growth. Indeed, we find that BrdU-retaining cells of the papilla can be labeled only by pulsing with BrdU from embryonic (E) day 11.25 to postnatal (P) day 7, the approximate period of kidney development in the mouse. BrdU signal in the cortex and outer medulla is rapidly diluted by cellular proliferation during embryonic development and juvenile growth, whereas cells within the papilla differentiate and exit the cell cycle during organogenesis. Indeed, by E17.5, little or no active proliferation can be seen in the distal papilla, indicating maturation of this structure in a distal-to-proximal manner during organogenesis. We conclude that BrdU-retaining cells of the papilla represent a population of cells that quiesce during embryonic development and localize within a region of the kidney that matures early. We therefore propose that selective papillary retention of BrdU arises through a combination of regionalized slowing of, and exit from, the cell cycle within the papilla during the period of ongoing kidney development, and extensive proliferative growth of the juvenile kidney resulting in dilution of BrdU below the detection level in extra-papillary regions.

Effect of in-medium nucleon-nucleon cross section on proton-proton momentum correlation in intermediate-energy heavy-ion collisions

NASA Astrophysics Data System (ADS)

Wang, Ting-Ting; Ma, Yu-Gang; Zhang, Chun-Jian; Zhang, Zheng-Qiao

2018-03-01

The proton-proton momentum correlation function from different rapidity regions is systematically investigated for the Au + Au collisions at different impact parameters and different energies from 400 A MeV to 1500 A MeV in the framework of the isospin-dependent quantum molecular dynamics model complemented by the Lednický-Lyuboshitz analytical method. In particular, the in-medium nucleon-nucleon cross-section dependence of the correlation function is brought into focus, while the impact parameter and energy dependence of the momentum correlation function are also explored. The sizes of the emission source are extracted by fitting the momentum correlation functions using the Gaussian source method. We find that the in-medium nucleon-nucleon cross section obviously influences the proton-proton momentum correlation function, which is from the whole-rapidity or projectile or target rapidity region at smaller impact parameters, but there is no effect on the mid-rapidity proton-proton momentum correlation function, which indicates that the emission mechanism differs between projectile or target rapidity and mid-rapidity protons.

IMRT and RapidArc commissioning of a TrueBeam linear accelerator using TG-119 protocol cases.

PubMed

Wen, Ning; Zhao, Bo; Kim, Jinkoo; Chin-Snyder, Karen; Bellon, Maria; Glide-Hurst, Carri; Barton, Kenneth; Chen, Daiquan; Chetty, Indrin J

2014-09-08

The purpose of this study is to evaluate the overall accuracy of intensity-modulated radiation therapy (IMRT) and RapidArc delivery using both flattening filter (FF) and flattening filter-free (FFF) modalities based on test cases developed by AAPM Task Group 119. Institutional confidence limits (CLs) were established as the baseline for patient specific treatment plan quality assurance (QA). The effects of gantry range, gantry speed, leaf speed, dose rate, as well as the capability to capture intentional errors, were evaluated by measuring a series of Picket Fence (PF) tests using the electronic portal imaging device (EPID) and EBT3 films. Both IMRT and RapidArc plans were created in a Solid Water phantom (30 × 30 × 15 cm3) for the TG-119 test cases representative of normal clinical treatment sites for all five photon energies (6X, 10X, 15X, 6X-FFF, 10X-FFF) and the Exact IGRT couch was included in the dose calculation. One high-dose point in the PTV and one low-dose point in the avoidance structure were measured with an ion chamber in each case for each energy. Similarly, two GAFCHROMIC EBT3 films were placed in the coronal planes to measure planar dose distributions in both high- and low-dose regions. The confidence limit was set to have 95% of the measured data fall within the tolerance. The mean of the absolute dose deviation for variable dose rate and gantry speed during RapidArc delivery was within 0.5% for all energies. The corresponding results for leaf speed tests were all within 0.4%. The combinations of dynamic leaf gap (DLG) and MLC transmission factor were optimized based on the ion chamber measurement results of RapidArc delivery for each energy. The average 95% CLs for the high-dose point in the PTV were 0.030 ± 0.007 (range, 0.022-0.038) for the IMRT plans and 0.029 ± 0.011 (range, 0.016-0.043) for the RapidArc plans. For low-point dose in the avoidance structures, the CLs were 0.029 ± 0.006 (range, 0.024-0.039) for the IMRT plans and 0.027 ± 0.013 (range, 0.017-0.047) for the RapidArc plans. The average 95% CLs using 3%/3 mm gamma criteria in the high-dose region were 5.9 ± 2.7 (range, 1.4-8.6) and 3.9 ± 2.9 (range, 1.5-8.8) for IMRT and RapidArc plans, respectively. The average 95% CLs in the low-dose region were 5.3 ± 2.6 (range, 1.2-7.4) and 3.7 ± 2.8 (range, 1.8-8.3) for IMRT and RapidArc plans, respectively. Based on ion chamber, as well as film measurements, we have established CLs values to ensure the high precision of IMRT and RapidArc delivery for both FF and FFF modalities.

Rapid flood loss estimation for large scale floods in Germany

NASA Astrophysics Data System (ADS)

Schröter, Kai; Kreibich, Heidi; Merz, Bruno

2013-04-01

Rapid evaluations of flood events are needed for efficient responses both in emergency management and financial appraisal. Beyond that, closely monitoring and documenting the formation and development of flood events and their impacts allows for an improved understanding and in depth analyses of the interplay between meteorological, hydrological, hydraulic and societal causes leading to flood damage. This contribution focuses on the development of a methodology for the rapid assessment of flood events. In the first place, the focus is on the prediction of damage to residential buildings caused by large scale floods in Germany. For this purpose an operational flood event analysis system is developed. This system has basic spatial thematic data available and supports data capturing about the current flood situation. This includes the retrieval of online gauge data and the integration of remote sensing data. Further, it provides functionalities to evaluate the current flood situation, to assess the hazard extent and intensity and to estimate the current flood impact using the flood loss estimation model FLEMOps+r. The operation of the flood event analysis system will be demonstrated for the past flood event from January 2011 with a focus on the Elbe/Saale region. On this grounds, further requirements and potential for improving the information basis as for instance by including hydrological and /or hydraulic model results as well as information from social sensors will be discussed.

Dorsal spinal cord stimulation obtunds the capacity of intrathoracic extracardiac neurons to transduce myocardial ischemia

PubMed Central

Ardell, Jeffrey L.; Cardinal, René; Vermeulen, Michel; Armour, J. Andrew

2009-01-01

Populations of intrathoracic extracardiac neurons transduce myocardial ischemia, thereby contributing to sympathetic control of regional cardiac indices during such pathology. Our objective was to determine whether electrical neuromodulation using spinal cord stimulation (SCS) modulates such local reflex control. In 10 anesthetized canines, middle cervical ganglion neurons were identified that transduce the ventricular milieu. Their capacity to transduce a global (rapid ventricular pacing) vs. regional (transient regional ischemia) ventricular stress was tested before and during SCS (50 Hz, 0.2 ms duration at 90% MT) applied to the dorsal aspect of the T1 to T4 spinal cord. Rapid ventricular pacing and transient myocardial ischemia both activated cardiac-related middle cervical ganglion neurons. SCS obtunded their capacity to reflexly respond to the regional ventricular ischemia, but not rapid ventricular pacing. In conclusion, spinal cord inputs to the intrathoracic extracardiac nervous system obtund the latter's capacity to transduce regional ventricular ischemia, but not global cardiac stress. Given the substantial body of literature indicating the adverse consequences of excessive adrenergic neuronal excitation on cardiac function, these data delineate the intrathoracic extracardiac nervous system as a potential target for neuromodulation therapy in minimizing such effects. PMID:19515981

Spatial patterns of development drive water use

USGS Publications Warehouse

Sanchez, G.M.; Smith, J.W.; Terando, Adam J.; Sun, G.; Meentemeyer, R.K.

2018-01-01

Water availability is becoming more uncertain as human populations grow, cities expand into rural regions and the climate changes. In this study, we examine the functional relationship between water use and the spatial patterns of developed land across the rapidly growing region of the southeastern United States. We quantified the spatial pattern of developed land within census tract boundaries, including multiple metrics of density and configuration. Through non‐spatial and spatial regression approaches we examined relationships and spatial dependencies between the spatial pattern metrics, socio‐economic and environmental variables and two water use variables: a) domestic water use, and b) total development‐related water use (a combination of public supply, domestic self‐supply and industrial self‐supply). Metrics describing the spatial patterns of development had the highest measure of relative importance (accounting for 53% of model's explanatory power), explaining significantly more variance in water use compared to socio‐economic or environmental variables commonly used to estimate water use. Integrating metrics characterizing the spatial pattern of development into water use models is likely to increase their utility and could facilitate water‐efficient land use planning.

Geospatial Modelling Approach for 3d Urban Densification Developments

NASA Astrophysics Data System (ADS)

Koziatek, O.; Dragićević, S.; Li, S.

2016-06-01

With growing populations, economic pressures, and the need for sustainable practices, many urban regions are rapidly densifying developments in the vertical built dimension with mid- and high-rise buildings. The location of these buildings can be projected based on key factors that are attractive to urban planners, developers, and potential buyers. Current research in this area includes various modelling approaches, such as cellular automata and agent-based modelling, but the results are mostly linked to raster grids as the smallest spatial units that operate in two spatial dimensions. Therefore, the objective of this research is to develop a geospatial model that operates on irregular spatial tessellations to model mid- and high-rise buildings in three spatial dimensions (3D). The proposed model is based on the integration of GIS, fuzzy multi-criteria evaluation (MCE), and 3D GIS-based procedural modelling. Part of the City of Surrey, within the Metro Vancouver Region, Canada, has been used to present the simulations of the generated 3D building objects. The proposed 3D modelling approach was developed using ESRI's CityEngine software and the Computer Generated Architecture (CGA) language.

Brain anatomical networks in early human brain development.

PubMed

Fan, Yong; Shi, Feng; Smith, Jeffrey Keith; Lin, Weili; Gilmore, John H; Shen, Dinggang

2011-02-01

Recent neuroimaging studies have demonstrated that human brain networks have economic small-world topology and modular organization, enabling efficient information transfer among brain regions. However, it remains largely unknown how the small-world topology and modular organization of human brain networks emerge and develop. Using longitudinal MRI data of 28 healthy pediatric subjects, collected at their ages of 1 month, 1 year, and 2 years, we analyzed development patterns of brain anatomical networks derived from morphological correlations of brain regional volumes. The results show that the brain network of 1-month-olds has the characteristically economic small-world topology and nonrandom modular organization. The network's cost efficiency increases with the brain development to 1 year and 2 years, so does the modularity, providing supportive evidence for the hypothesis that the small-world topology and the modular organization of brain networks are established during early brain development to support rapid synchronization and information transfer with minimal rewiring cost, as well as to balance between local processing and global integration of information. Copyright © 2010. Published by Elsevier Inc.

Wyoming Basin Rapid Ecoregional Assessment

USGS Publications Warehouse

Carr, Natasha B.; Means, Robert E.

2013-01-01

The overall goal of the Wyoming Basin Rapid Ecoregional Assessment (REA) is to provide information that supports regional planning and analysis for the management of ecological resources. The REA provides an assessment of baseline ecological conditions, an evaluation of current risks from drivers of ecosystem change (including energy development, fire, and invasive species), and a predictive capacity for evaluating future risks (including climate change). Additionally, the REA may be used for identifying priority areas for conservation or restoration and for assessing cumulative effects of multiple land uses. The Wyoming Basin REA will address Management Questions developed by the Bureau of Land Management and other agency partners for 8 major biomes and 19 species or species assemblages. The maps developed for addressing Management Questions will be integrated into overall maps of landscape-level ecological values and risks. The maps can be used to address the goals of the REA at a number of levels: for individual species, species assemblages, aquatic and terrestrial systems, and for the entire ecoregion. This allows flexibility in how the products of the REA are compiled to inform planning and management actions across a broad range of spatial scales.

Duration of detection of anti-BmR1 IgG4 antibodies after mass-drug administration (MDA) in Sarawak, Malaysia.

PubMed

Noordin, R; Muhi, J; Md Idris, Z; Arifin, N; Kiyu, A

2012-03-01

The detection rates of brugian filariasis in three regions of Sarawak namely Central, North and South after three courses of mass drug administration (MDA) from year 2004 to 2006 was investigated. A recombinant BmR1 antigen-based IgG4 detection test, named Brugia Rapid and night blood smear for microfilaria (mf) detection were used. All three regions recorded a sharp fall in mf positive rates after a year post-MDA. Meanwhile Brugia Rapid positive rates declined more gradually to 3.8% and 5.6% of the pre-MDA levels in the Central and North regions, respectively. This study showed that in filariasis endemic areas in Sarawak, anti-filarial IgG4 antibodies to BmR1, as detected by the Brugia Rapid test, were positive for one to two years after mf disappearance.

Oscillatory support for rapid frequency change processing in infants.

PubMed

Musacchia, Gabriella; Choudhury, Naseem A; Ortiz-Mantilla, Silvia; Realpe-Bonilla, Teresa; Roesler, Cynthia P; Benasich, April A

2013-11-01

Rapid auditory processing and auditory change detection abilities are crucial aspects of speech and language development, particularly in the first year of life. Animal models and adult studies suggest that oscillatory synchrony, and in particular low-frequency oscillations play key roles in this process. We hypothesize that infant perception of rapid pitch and timing changes is mediated, at least in part, by oscillatory mechanisms. Using event-related potentials (ERPs), source localization and time-frequency analysis of event-related oscillations (EROs), we examined the neural substrates of rapid auditory processing in 4-month-olds. During a standard oddball paradigm, infants listened to tone pairs with invariant standard (STD, 800-800 Hz) and variant deviant (DEV, 800-1200 Hz) pitch. STD and DEV tone pairs were first presented in a block with a short inter-stimulus interval (ISI) (Rapid Rate: 70 ms ISI), followed by a block of stimuli with a longer ISI (Control Rate: 300 ms ISI). Results showed greater ERP peak amplitude in response to the DEV tone in both conditions and later and larger peaks during Rapid Rate presentation, compared to the Control condition. Sources of neural activity, localized to right and left auditory regions, showed larger and faster activation in the right hemisphere for both rate conditions. Time-frequency analysis of the source activity revealed clusters of theta band enhancement to the DEV tone in right auditory cortex for both conditions. Left auditory activity was enhanced only during Rapid Rate presentation. These data suggest that local low-frequency oscillatory synchrony underlies rapid processing and can robustly index auditory perception in young infants. Furthermore, left hemisphere recruitment during rapid frequency change discrimination suggests a difference in the spectral and temporal resolution of right and left hemispheres at a very young age. © 2013 Elsevier Ltd. All rights reserved.

[Determination of triterpenoic acids in fruits of Ziziphus jujuba using HPLC-MS with polymeric ODS column].

PubMed

Zhang, Yong; Zhou, An; Xie, Xiao-Mei

2013-03-01

A simple and sensitive method has been developed to simultaneously determine betunilic acid, oleanolic acid and ursolic acid in the fruits of Ziziphus jujuba from different regions by HPLC-MS. This HPLC assay was performed on PAH polymeric C18 bonded stationary phase column with mobile phase contained acetonitrile-water (90: 10) and with negative ESI detection mode. The developed approach was characterized by short time consumption for chromatographic separation, high sensitivity and good reliability so as to meet the requirements for rapid analysis of large-batch fruits of Z. jujuba from different habitats.

Water resources management. World Bank policy paper; Gestion des ressources en eau

DOE Office of Scientific and Technical Information (OSTI.GOV)

NONE

1993-12-31

The management framework presented in this study addresses the demand for water in Asia caused by rapid population growth and economic development. It focuses on three key actions to meet the challenge: evaluate how the region manages water resources; identify guidelines for the Bank`s water resource programs; and develop country-specific strategies and promote joint programs. Reforms built into the framework seek to modernize institutions that affect water sources. The authors suggest ways to improve planning and long-term management, streamline economic and financial policy, and upgrade `real-time` management, operation, and maintenance.

Design of an Efficient Turbulent Micro-Mixer for Protein Folding Experiments

NASA Astrophysics Data System (ADS)

Inguva, Venkatesh; Perot, Blair

2015-11-01

Protein folding studies require the development of micro-mixers that require less sample, mix at faster rates, and still provide a high signal to noise ratio. Chaotic to marginally turbulent micro-mixers are promising candidates for this application. In this study, various turbulence and unsteadiness generation concepts are explored that avoid cavitation. The mixing enhancements include flow turning regions, flow splitters, and vortex shedding. The relative effectiveness of these different approaches for rapid micro-mixing is discussed. Simulations found that flow turning regions provided the best mixing profile. Experimental validation of the optimal design is verified through laser confocal microscopy experiments. This work is support by the National Science Foundation.

Transcriptome analysis reveals regional and temporal differences in mucosal immune system development in the small intestine of neonatal calves.

PubMed

Liang, Guanxiang; Malmuthuge, Nilusha; Bao, Hua; Stothard, Paul; Griebel, Philip J; Guan, Le Luo

2016-08-11

Postnatal development of the mammalian mucosal immune system is crucial for responding to the rapid colonization by commensal bacteria and possible exposure to pathogens. This study analyzed expression patterns for mRNAs and their relationship with microRNAs (miRNAs) in the bovine small intestine during the critical neonatal period (0 to 42 days). This analysis revealed molecular mechanisms regulating the postnatal development of the intestinal mucosal immune system. Small intestine samples (jejunum and ileum) were collected from newborn male, Holstein calves immediately post-partum (n = 3) and at 7 (n = 5), 21 (n = 5), and 42 (n = 5) days of age and the transcriptomes were profiled using RNA-Seq. When analyzing all time points collectively, greater expression of genes encoding the complement functional pathway, as well as lower expression of genes encoding Toll-like receptors and NOD-like receptors were observed in the jejunum when compared to the ileum. In addition, significant changes in the expression of immune-related genes were detected within the first week post-partum in both jejunum and ileum. For example, increased expression of genes encoding tight junction proteins (claudin 1, claudin 4 and occludin), an antimicrobial peptide (Regenerating Islet-Derived 3-γ), NOD-like receptors (NACHT, LRR and PYD domain-containing protein 3), regulatory T cell marker (forkhead box P3), and both anti-inflammatory (interleukin 10) and pro-inflammatory (interleukin 8) cytokines was observed throughout the small intestine of 7-day-old calves when compared to newborn calves. Moreover, the expression of mucosal immune-related genes were either positively or negatively correlated with total bacterial population depending on both intestinal region and age. The integrated analysis of miRNAs and mRNAs supported the conclusion that miRNAs may regulate temporal changes in the expression of genes encoding tight junction proteins (miR-335), cytokines (miR-335) and bacterial recognition (miR-100) during the first week of small intestine development. The rapid development of transcriptional differences between jejunum and ileum reveal that these two intestinal regions make distinct contributions to the intestinal mucosal immune system during the early neonatal period. In addition, transcriptome analysis indicates that the first week after birth is a very dynamic developmental period for the intestinal mucosal immune system and these changes may be regulated by both miRNAs and microbial colonization. Findings from this study indicate that a detailed analysis of both the abundance and diversity of the colonizing microbiome may be necessary to understand factors regulating the rapid development of the mucosal immune system during the first week of life.

Mobile Measurements of Gas and Particle Emissions from Marcellus Shale Gas Development

NASA Astrophysics Data System (ADS)

DeCarlo, P. F.; Goetz, J. D.; Floerchinger, C. R.; Fortner, E.; Wormhoudt, J.; Knighton, W. B.; Herndon, S.; Kolb, C. E.; Shaw, S. L.; Knipping, E. M.

2013-12-01

Production of natural gas in the Marcellus shale is increasing rapidly due to the vast quantities of natural gas stored in the formation. Transient and long-term activities have associated emissions to the atmosphere of methane, volatile organic compounds, NOx, particulates and other species from gas production and transport infrastructure. In the summer of 2012, a team of researchers from Drexel University and Aerodyne Research deployed the Aerodyne mobile laboratory (AML) and measured in-situ concentrations of gas-phase and aerosol chemical components in the main gas producing regions of Pennsylvania, with the overall goal of understanding the impacts to regional ozone and particulate matter (PM) concentrations. State-of-the-art instruments including quantum cascade laser systems, proton transfer mass spectrometry, tunable diode lasers and a soot particle aerosol mass spectrometer, were used quantify concentrations of pollutants of interest. Chemical species measured include methane, ethane, NO, NO2, CO, CO2, SO2, and many volatile organic compounds, and aerosol size and chemical composition. Tracer-release techniques were employed to link sources with emissions and to quantify emission rates from gas facilities, in order to understand the regional burden of these chemical species from oil and gas development in the Marcellus. Measurements were conducted in two regions of Pennsylvania: the NE region that is predominantly dry gas (95% + methane), and the SW region where wet gas (containing greater than 5% higher hydrocarbons) is found. Regional scale measurements of current levels of air pollutants will be shown and will put into context how further development of the gas resource in one of the largest natural gas fields in the world impacts air quality in a region upwind of the highly urbanized east coast corridor.

Future Earth -- New Approaches to address Climate Change and Sustainability in the MENA Region

NASA Astrophysics Data System (ADS)

Lange, Manfred; Abu Alhaija, Rana

2016-04-01

Interactions and feedbacks between rapidly increasing multiple pressures on water, energy and food security drive social-ecological systems at multiple scales towards critical thresholds in countries of the Eastern Mediterranean, the Middle East and North Africa (MENA Region). These pressures, including climate change, the growing demand on resources and resource degradation, urbanization and globalization, cause unprecedented challenges for countries and communities in the region. Responding to these challenges requires integrated science and a closer relationship with policy makers and stakeholders. Future Earth has been designed to respond to these urgent needs. In order to pursue such objectives, Future Earth is becoming the host organization for some 23 programs that were previously run under four global environmental change programmes, DIVERSITAS, the International Geosphere-Biosphere Programme (IGBP), the International Human Dimensions Programme (IHDP) and the World Climate Research Programme (WCRP). Some further projects arose out of the Earth System Science Partnership (ESSP). It thus brings together a wide spectrum of expertise and knowledge that will be instrumental in tackling urgent problems in the MENA region and the wider Mediterranean Basin. Future Earth is being administered by a globally distributed secretariat that also includes a series of Regional Centers, which will be the nuclei for the development of new regional networks. The Cyprus Institute in Nicosia, Cyprus (CyI; www.cyi.ac.cy) is hosting the Regional Center for the MENA Region. The CyI is a non-profit research and post-graduate education institution with a strong scientific and technological orientation and a distinctive regional, Eastern Mediterranean scope. Cyprus at the crossroads of three continents and open to all nations in the region provides excellent conditions for advancing the research agenda of Future Earth in the MENA Region. Given the recent and ongoing major political and societal transformation in the region, research and development that help prepare the MENA countries for anticipated global changes and advance the development of sustainable structures are not only meaningful, but also a quite challenging undertakings.

Virtual scarce water in China.

PubMed

Feng, Kuishuang; Hubacek, Klaus; Pfister, Stephan; Yu, Yang; Sun, Laixiang

2014-07-15

Water footprints and virtual water flows have been promoted as important indicators to characterize human-induced water consumption. However, environmental impacts associated with water consumption are largely neglected in these analyses. Incorporating water scarcity into water consumption allows better understanding of what is causing water scarcity and which regions are suffering from it. In this study, we incorporate water scarcity and ecosystem impacts into multiregional input-output analysis to assess virtual water flows and associated impacts among 30 provinces in China. China, in particular its water-scarce regions, are facing a serious water crisis driven by rapid economic growth. Our findings show that inter-regional flows of virtual water reveal additional insights when water scarcity is taken into account. Consumption in highly developed coastal provinces is largely relying on water resources in the water-scarce northern provinces, such as Xinjiang, Hebei, and Inner Mongolia, thus significantly contributing to the water scarcity in these regions. In addition, many highly developed but water scarce regions, such as Shanghai, Beijing, and Tianjin, are already large importers of net virtual water at the expense of water resource depletion in other water scarce provinces. Thus, increasingly importing water-intensive goods from other water-scarce regions may just shift the pressure to other regions, but the overall water problems may still remain. Using the water footprint as a policy tool to alleviate water shortage may only work when water scarcity is taken into account and virtual water flows from water-poor regions are identified.

Scientific Collaboration Along the Trinational Frontier of Brazil-Bolivia-Peru: Implications for Regional Land-Use in the MAP Region of Southwestern Amazonia

NASA Astrophysics Data System (ADS)

Brown, I.

2002-12-01

High-speed road systems are connecting southwestern Amazonia (~1.5 million km2) to Pacific and Atlantic ports as well as providing greater access to Brazilian, Bolivian and Peruvian urban markets. Coupled with this increased accessibility are ambitious governmental plans to expand production of timber, non-timber forest products, and beef, all of which are likely to modify human migrations in the region. The heart of southwestern Amazonia lies in the trinational frontier region of Madre de Dios Department/Peru, eastern Acre State/Brazil and Pando Department/Bolivia (MAP region: ~200,000 km2, ~500,000 inhabitants). The MAP region composes a global hot spot of terrestrial biodiversity and has become an axis of integration for the three countries. Faced with rapid change in socioeconomic trends, regional environmental scientists and professionals have promoted collaborative projects to analyze land use trends and their forcing functions and to supply these results to local and regional societies. In addition, they have begun to develop a regional scientific community that bridges different nationalities and specialties. The projects are both international - as they involve three countries - and local/regional as they involve institutions that are within a radius of 300 km of the border. In the past two years, LBA-sponsored activities have helped bring over 100 professionals together in the region in five MAP-oriented workshops. The research results are now influencing public policy and are being incorporated into the regional school systems with the objective of maximizing the benefits and minimizing the adverse impacts of the changing socio-economic trends on land-use and development in the MAP region.

Technology and politics: The regional airport experience

NASA Technical Reports Server (NTRS)

Starling, J. D.; Brown, J.; Gerhardt, J. M.; Dominus, M. I.

1976-01-01

The findings of a comparative study of the following six regional airports were presented: Dallas/Fort Worth, Kansas City, Washington, D.C., Montreal, Tampa, and St. Louis. Each case was approached as a unique historical entity, in order to investigate common elements such as: the use of predictive models in planning, the role of symbolism to heighten dramatic effects, the roles of community and professional elites, and design flexibility. Some of the factors considered were: site selection, consolidation of airline service, accessibility, land availability and cost, safety, nuisance, and pollution constraints, economic growth, expectation of regional growth, the demand forecasting conundrum, and design decisions. The hypotheses developed include the following: the effect of political, social, and economic conflicts, the stress on large capacity and dramatic, high-technology design, projections of rapid growth to explain the need for large capital outlays.

Random-access optical-resolution photoacoustic microscopy using a digital micromirror device

PubMed Central

Liang, Jinyang; Zhou, Yong; Winkler, Amy W.; Wang, Lidai; Maslov, Konstantin I.; Li, Chiye; Wang, Lihong V.

2013-01-01

We developed random-access optical-resolution photoacoustic microscopy using a digital micromirror device. This system can rapidly scan arbitrarily shaped regions of interest within a 40×40 μm2 imaging area with a lateral resolution of 3.6 μm. To identify a region of interest, a global structural image is first acquired, then the selected region is scanned. The random-access ability was demonstrated by imaging two static samples, a carbon fiber cross and a monolayer of red blood cells, with an acquisition rate up to 4 kilohertz. The system was then used to monitor blood flow in vivo in real time within user-selected capillaries in a mouse ear. By imaging only the capillary of interest, the frame rate was increased by up to 9.2 times. PMID:23903111

Random-access optical-resolution photoacoustic microscopy using a digital micromirror device.

PubMed

Liang, Jinyang; Zhou, Yong; Winkler, Amy W; Wang, Lidai; Maslov, Konstantin I; Li, Chiye; Wang, Lihong V

2013-08-01

We developed random-access optical-resolution photoacoustic microscopy using a digital micromirror device. This system can rapidly scan arbitrarily shaped regions of interest within a 40 μm×40 μm imaging area with a lateral resolution of 3.6 μm. To identify a region of interest, a global structural image is first acquired, then the selected region is scanned. The random-access ability was demonstrated by imaging two static samples, a carbon fiber cross and a monolayer of red blood cells, with an acquisition rate up to 4 kHz. The system was then used to monitor blood flow in vivo in real time within user-selected capillaries in a mouse ear. By imaging only the capillary of interest, the frame rate was increased by up to 9.2 times.

Impact of Marcellus Shale natural gas development in southwest Pennsylvania on volatile organic compound emissions and regional air quality.

PubMed

Swarthout, Robert F; Russo, Rachel S; Zhou, Yong; Miller, Brandon M; Mitchell, Brittney; Horsman, Emily; Lipsky, Eric; McCabe, David C; Baum, Ellen; Sive, Barkley C

2015-03-03

The Marcellus Shale is the largest natural gas deposit in the U.S. and rapid development of this resource has raised concerns about regional air pollution. A field campaign was conducted in the southwestern Pennsylvania region of the Marcellus Shale to investigate the impact of unconventional natural gas (UNG) production operations on regional air quality. Whole air samples were collected throughout an 8050 km(2) grid surrounding Pittsburgh and analyzed for methane, carbon dioxide, and C1-C10 volatile organic compounds (VOCs). Elevated mixing ratios of methane and C2-C8 alkanes were observed in areas with the highest density of UNG wells. Source apportionment was used to identify characteristic emission ratios for UNG sources, and results indicated that UNG emissions were responsible for the majority of mixing ratios of C2-C8 alkanes, but accounted for a small proportion of alkene and aromatic compounds. The VOC emissions from UNG operations accounted for 17 ± 19% of the regional kinetic hydroxyl radical reactivity of nonbiogenic VOCs suggesting that natural gas emissions may affect compliance with federal ozone standards. A first approximation of methane emissions from the study area of 10.0 ± 5.2 kg s(-1) provides a baseline for determining the efficacy of regulatory emission control efforts.

Implementing Cargo Movement into Climate Based Risk Assessment of Vector-Borne Diseases

PubMed Central

Thomas, Stephanie Margarete; Tjaden, Nils Benjamin; van den Bos, Sanne; Beierkuhnlein, Carl

2014-01-01

During the last decades the disease vector Aedes albopictus (Asian tiger mosquito) has rapidly spread around the globe. Global shipment of goods contributes to its permanent introduction. Invaded regions are facing novel and serious public health concerns, especially regarding the transmission of formerly non-endemic arboviruses such as dengue and chikungunya. The further development and potential spread to other regions depends largely on their climatic suitability. Here, we have developed a tool for identifying and prioritizing European areas at risk for the establishment of Aedes albopictus by taking into account, for the first time, the freight imports from this mosquito’s endemic countries and the climate suitability at harbors and their surrounding regions. In a second step we consider the further transport of containers by train and inland waterways because these types of transport can be well controlled. We identify European regions at risk, where a huge amount of transported goods meet climatically suitable conditions for the disease vector. The current and future suitability of the climate for Aedes albopictus was modeled by a correlative niche model approach and the Regional Climate Model COSMO-CLM. This risk assessment combines impacts of globalization and global warming to improve effective and proactive interventions in disease vector surveillance and control actions. PMID:24658412

A regional groundwater-flow model for sustainable groundwater-resource management in the south Asian megacity of Dhaka, Bangladesh

NASA Astrophysics Data System (ADS)

Islam, Md Bayzidul; Firoz, A. B. M.; Foglia, Laura; Marandi, Andres; Khan, Abidur Rahman; Schüth, Christoph; Ribbe, Lars

2017-05-01

The water resources that supply most of the megacities in the world are under increased pressure because of land transformation, population growth, rapid urbanization, and climate-change impacts. Dhaka, in Bangladesh, is one of the largest of 22 growing megacities in the world, and it depends on mainly groundwater for all kinds of water needs. The regional groundwater-flow model MODFLOW-2005 was used to simulate the interaction between aquifers and rivers in steady-state and transient conditions during the period 1981-2013, to assess the impact of development and climate change on the regional groundwater resources. Detailed hydro-stratigraphic units are described according to 150 lithology logs, and a three-dimensional model of the upper 400 m of the Greater Dhaka area was constructed. The results explain how the total abstraction (2.9 million m3/d) in the Dhaka megacity, which has caused regional cones of depression, is balanced by recharge and induced river leakage. The simulated outcome shows the general trend of groundwater flow in the sedimentary Holocene aquifers under a variety of hydrogeological conditions, which will assist in the future development of a rational and sustainable management approach.

A project in two parts: Developing fire histories for the eastern U.S. and creating a climate-based continental fire frequency model to fill data gaps

Treesearch

Richard Guyette; Michael Stambaugh; Daniel Dey

2011-01-01

Tree-ring dated fire scars provide long-term records of fire frequency, giving land managers valuable baseline information about the fire regimes that existed prior to Euro-American settlement. However, for the East, fire history data prove difficult to acquire because the generally moister climate of the region causes rapid decay of wood. In an endeavor to fill data...

Twisting Plasma Interactions

NASA Image and Video Library

2017-06-19

Several short stalks of cooler, darker plasma spun and twisted as they interacted with each other at the sun's edge (June 14-15, 2017). The row of strands, which together form a prominence, were being pulled back and forth by magnetic forces. The dynamic action was observed for just over one day. Also noteworthy is the rapid development of a bright active region in the upper right about halfway through the clip. Movies are available at https://photojournal.jpl.nasa.gov/catalog/PIA21761

A model for undergraduate physics major outcomes objectives

NASA Astrophysics Data System (ADS)

Taylor, G. R.; Erwin, T. Dary

1989-06-01

Concern with assessment of student outcomes of undergraduate physics major programs is rapidly rising. The Southern Association of Colleges and Schools and many other regional and state organizations are requiring explicit outcomes assessment in the accrediting process. The first step in this assessment process for major programs is the establishment of student outcomes objectives. A model and set of physics outcomes (educational) objectives that were developed by the faculty in the Physics Department at James Madison University are presented.

Diabetes mellitus: Trends in northern India

PubMed Central

Gutch, Manish; Razi, Syed Mohd; Kumar, Sukriti; Gupta, Keshav Kumar

2014-01-01

Diabetes mellitus is becoming a global health issue with more than 80% diabetics living in developing countries. India accounts for 62.4 million diabetics (2011). Indian Council of Medical Research India Diabetes Study (ICMR-INDIAB) study showed highest weighted prevalence rate in the north India among all studied regions. Diabetes in north India has many peculiarities in all aspects from risk factors to control programmers. North Indians are becoming more prone for diabetes and dyslipidemia because rapid westernization of living style and diet due rapid migration to metropolitan cities for employment. North Indian diabetes is plagued with gender bias against females, poor quality of health services, myths, and lack of disease awareness compounded with small number of prevention and awareness programmers that too are immature to counteract the growing pandemic. PMID:25285295

TriNet "ShakeMaps": Rapid generation of peak ground motion and intensity maps for earthquakes in southern California

USGS Publications Warehouse

Wald, D.J.; Quitoriano, V.; Heaton, T.H.; Kanamori, H.; Scrivner, C.W.; Worden, C.B.

1999-01-01

Rapid (3-5 minutes) generation of maps of instrumental ground-motion and shaking intensity is accomplished through advances in real-time seismographic data acquisition combined with newly developed relationships between recorded ground-motion parameters and expected shaking intensity values. Estimation of shaking over the entire regional extent of southern California is obtained by the spatial interpolation of the measured ground motions with geologically based frequency and amplitude-dependent site corrections. Production of the maps is automatic, triggered by any significant earthquake in southern California. Maps are now made available within several minutes of the earthquake for public and scientific consumption via the World Wide Web; they will be made available with dedicated communications for emergency response agencies and critical users.

Development of a reverse transcription quantitative polymerase chain reaction-based assay for broad coverage detection of African and Asian Zika virus lineages.

PubMed

Yang, Yang; Wong, Gary; Ye, Baoguo; Li, Shihua; Li, Shanqin; Zheng, Haixia; Wang, Qiang; Liang, Mifang; Gao, George F; Liu, Lei; Liu, Yingxia; Bi, Yuhai

2017-06-01

The Zika virus (ZIKV) is an arbovirus that has spread rapidly worldwide within recent times. There is accumulating evidence that associates ZIKV infections with Guillain-Barré Syndrome (GBS) and microcephaly in humans. The ZIKV is genetically diverse and can be separated into Asian and African lineages. A rapid, sensitive, and specific assay is needed for the detection of ZIKV across various pandemic regions. So far, the available primers and probes do not cover the genetic diversity and geographic distribution of all ZIKV strains. To this end, we have developed a one-step quantitative reverse transcription polymerase chain reaction (qRT-PCR) assay based on conserved sequences in the ZIKV envelope (E) gene. The detection limit of the assay was determined to be five RNA transcript copies and 2.94 × 10 -3 50% tissue culture infectious doses (TCID 50 ) of live ZIKV per reaction. The assay was highly specific and able to detect five different ZIKV strains covering the Asian and African lineages without nonspecific amplification, when tested against other flaviviruses. The assay was also successful in testing for ZIKV in clinical samples. Our assay represents an improvement over the current methods available for the detection ZIKV and would be valuable as a diagnostic tool in various pandemic regions.

What rheumatologists need to know about CRISPR/Cas9.

PubMed

Gibson, Gary J; Yang, Maozhou

2017-04-01

CRISPR/Cas9 genome editing technology has taken the research world by storm since its use in eukaryotes was first proposed in 2012. Publications describing advances in technology and new applications have continued at an unrelenting pace since that time. In this Review, we discuss the application of CRISPR/Cas9 for creating gene mutations - the application that initiated the current avalanche of interest - and new developments that have largely answered initial concerns about its specificity and ability to introduce new gene sequences. We discuss the new, diverse and rapidly growing adaptations of the CRISPR/Cas9 technique that enable activation, repression, multiplexing and gene screening. These developments have enabled researchers to create sophisticated tools for dissecting the function and inter-relatedness of genes, as well as noncoding regions of the genome, and to identify gene networks and noncoding regions that promote disease or confer disease susceptibility. These approaches are beginning to be used to interrogate complex and multilayered biological systems and to produce complex animal models of disease. CRISPR/Cas9 technology has enabled the application of new therapeutic approaches to treating disease in animal models, some of which are beginning to be seen in the first human clinical trials. We discuss the direct application of these techniques to rheumatic diseases, which are currently limited but are sure to increase rapidly in the near future.

Producing an integrated climate-land-energy-water (CLEW) model for glaciated regions in the developing world

NASA Astrophysics Data System (ADS)

Delman, E. M.; Thomas, B. F.; Famiglietti, J. S.

2013-12-01

Growing concern over the impact of climate change on global freshwater resources has spurred a demand for practical, basin-specific adaptation tools. The potential for water stress is particularly inflated in the glaciated watersheds of the developing world; widespread and rapid glacial retreat has forced regional resource managers to reconcile the reality of a diminishing supply with an overall increase in demand, while accounting for the underlying geopolitical and cultural context. An integrated approach, such as the development of a Climate-Land-Energy-Water (CLEW) model that examines relationships among climate, land-use, and the energy and water sectors, can be used to assess the impact of different climate change scenarios on basin sustainability and vulnerability. This study will first constrain the hydrologic budget in the Río Santa Watershed of Peru using satellite imagery, historical and contemporary stream discharge data, hydrologic modeling, climatic data analysis, and isotopic and chemical tracers. Ultimately, glacier retreat will be examined at the watershed scale and be used as an input in the CLEW model framework to assess hydrologic budget scenarios and the subsequent impact on regional economic and environmental sustainability.

Rapid Molecular Identification of Human Taeniid Cestodes by Pyrosequencing Approach

PubMed Central

Thanchomnang, Tongjit; Tantrawatpan, Chairat; Intapan, Pewpan M.; Sanpool, Oranuch; Janwan, Penchom; Lulitanond, Viraphong; Tourtip, Somjintana; Yamasaki, Hiroshi; Maleewong, Wanchai

2014-01-01

Taenia saginata, T. solium, and T. asiatica are causative agents of taeniasis in humans. The difficulty of morphological identification of human taeniids can lead to misdiagnosis or confusion. To overcome this problem, several molecular methods have been developed, but use of these tends to be time-consuming. Here, a rapid and high-throughput pyrosequencing approach was developed for the identification of three human taeniids originating from various countries. Primers targeting the mitochondrial cytochrome c oxidase subunit 1 (cox1) gene of the three Taenia species were designed. Variations in a 26-nucleotide target region were used for identification. The reproducibility and accuracy of the pyrosequencing technology was confirmed by Sanger sequencing. This technique will be a valuable tool to distinguish between sympatric human taeniids that occur in Thailand, Asia and Pacific countries. This method could potentially be used for the molecular identification of the taeniid species that might be associated with suspicious cysts and lesions, or cyst residues in humans or livestock at the slaughterhouse. PMID:24945530

Fiber photo-catheters for laser treatment of atrial fibrillation

PubMed Central

Peshko, Igor; Rubtsov, Vladimir; Vesselov, Leonid; Sigal, Gennady; Laks, Hillel

2009-01-01

A fiber photo-catheter has been developed for surgical treatment of atrial fibrillation with laser radiation. Atrial fibrillation (AF) is a heart rhythm abnormality that involves irregular and rapid heartbeats. Recent studies demonstrate the superiority of treating AF disease with optical radiation of the near infrared region. To produce long continuous transmural lesions, solid-state lasers and laser diodes, along with end-emitting fiber catheters, have been used experimentally. The absence of side-emitting flexible catheters with the ability to produce long continuous lesions limits the further development of this technology. In this research, a prototype of an optical catheter, consisting of a flexible 10-cm fiber diffuser has been used to make continuous photocoagulation lesions for effective maze procedure treatments. The system also includes: a flexible optical reflector; a series of openings for rapid self-attachment to the tissue; and an optional closed-loop irrigating chamber with circulating saline to cool the optical diffuser and irrigate the tissue. PMID:19587838

Health anthropology and urban health research.

PubMed

Obrist, Brigit; VAN Eeuwijk, Peter; Weiss, Mitchell G

2003-12-01

We live in a rapidly urbanising world. According to the 2001 statistics of the United Nations,a the proportion of urban dwellers rose from 30% in 1950 to 47% in 2000 and will probably attain 60% in 2030. Almost 70% of these urban dwellers live in cities of developing regions. At the current rates of urbanisation, the number of city dwellers in the world will equal that of their rural counterparts by 2007. In the late 1980s, researchers became increasingly concerned about the combined impact of rapid urban growth and economic recession on the health of a majority of people in African and Asian cities. Several books established urban health research with a focus on developing countries as a multidisciplinary field of inquiry (Harpham et al., 1988; Salem &Jeannée, 1989). It is now widely recognised that urbanisation per se is not necessarily bad for health, but it becomes so if urban governments fail to establish and support necessary infrastructure and services to protect citizens from environmental hazards and from social, economic and political insecurity.

Key Factors Influencing Rapid Development of Potentially Dune-Stabilizing Moss-Dominated Crusts

PubMed Central

Bu, Chongfeng; Zhang, Kankan; Zhang, Chunyun; Wu, Shufang

2015-01-01

Biological soil crusts (BSCs) are a widespread photosynthetic ground cover in arid and semiarid areas. They have many positive ecological functions, such as increasing soil stability, and reducing water and wind erosion. Using artificial technology to achieve the rapid development of BSCs is expected to become a low-cost and highly beneficial ecological restoration measure. In the present study, typical moss-dominated crusts in a region characterized by mobile dunes (Mu Us Sandland, China) were collected, and a 40-day cultivation experiment was performed to investigate key factors, including watering frequency, light intensity and a nutrient addition, which affect the rapid development of moss crusts and their optimal combination. The results demonstrated that watering frequency and illumination had a significant positive effect (P=0.049, three-factor ANOVA) and a highly significant, complicated effect (P=0.000, three-factor ANOVA), respectively, on the plant density of bryophytes, and a highly significant positive effect on the chlorophyll a and exopolysaccharide contents (P=0.000, P=0.000; P=0.000, P=0.000; one-way ANOVA). Knop nutrient solution did not have a significant positive but rather negative effect on the promotion of moss-dominated crust development (P=0.270, three-factor ANOVA). Moss-dominated crusts treated with the combination of moderate-intensity light (6,000 lx) + high watering frequency (1 watering/2 days) - Knop had the highest moss plant densities, while the treatment with high-intensity light (12,000 lx) + high watering frequency (1 watering/2 days) + Knop nutrient solution had higher chlorophyll a contents than that under other treatments. It is entirely feasible to achieve the rapid development of moss crusts under laboratory conditions by regulating key factors and creating the right environment. Future applications may seek to use cultured bryophytes to control erosion in vulnerable areas with urgent needs. PMID:26230324

Development of a novel rapid immunochromatographic test specific for the H5 influenza virus.

PubMed

Miyagawa, Eiji; Kogaki, Hiroyuki; Uchida, Yoshiaki; Fujii, Nobuyuki; Shirakawa, Takashi; Sakoda, Yoshihrio; Kida, Hiroshi

2011-05-01

Three anti-H5 influenza virus monoclonal antibody (mAb) clones, IFH5-26, IFH5-115 and IFH5-136, were obtained by immunising a BALB/C mouse with inactivated A/duck/Hokkaido/Vac-1/04 (H5N1). These mAbs were found to recognise specifically the haemagglutinin (HA) epitope of the influenza H5 subtypes by western blotting with recombinant HAs; however, these mAbs have no neutralising activity for A/duck/Hokkaido/84/02 (H5N3) or A/Puerto Ric/8/34 (H1N1). Each epitope of these mAbs was a conformational epitope that was formed from the regions located between 46 to 60 amino acids (aa) and 312 to 322 aa for IFH5-115, from 101 to 113 aa and 268 to 273 aa for IFH5-136 and from 61 to 80 aa and 290 to 300 aa for IFH5-26. The epitopes were located in the loop regions between the receptor region and alpha-helix structure in haemagglutinin 1 (HA1). Influenza A virus H5-specific rapid immunochromatographic test kits were tested as solid phase antibody/alkaline phosphate-conjugated mAb in the following three combinations: IFH5-26/IFH5-115, IFH5-136/IFH5-26 and IFH5-136/IFH5-115. In every combination, only influenza A H5 subtypes were detected. For effective clinical application, rapid dual discrimination immunochromatographic test kits in combination with H5 HA-specific mAb, IFA5-26 and IFA5-115 and the influenza A NP NP-specific mAb, FVA2-11, were developed. The dual discrimination immunochromatographic tests kits detected influenza A virus H5 subtypes as H5 line-positive and all influenza A subtypes as A line-positive simultaneously. The dual discrimination immunochromatographic test kits may be useful for discriminating highly pathogenic avian influenza A H5N1 viruses from seasonal influenza A virus, as well as for confirming influenza infection status in human, avian and mammalian hosts. Copyright © 2011 Elsevier B.V. All rights reserved.

Stochastic agent-based modeling of tuberculosis in Canadian Indigenous communities.

PubMed

Tuite, Ashleigh R; Gallant, Victor; Randell, Elaine; Bourgeois, Annie-Claude; Greer, Amy L

2017-01-13

In Canada, active tuberculosis (TB) disease rates remain disproportionately higher among the Indigenous population, especially among the Inuit in the north. We used mathematical modeling to evaluate how interventions might enhance existing TB control efforts in a region of Nunavut. We developed a stochastic, agent-based model of TB transmission that captured the unique household and community structure. Evaluated interventions included: (i) rapid treatment of active cases; (ii) rapid contact tracing; (iii) expanded screening programs for latent TB infection (LTBI); and (iv) reduced household density. The outcomes of interest were incident TB infections and total diagnosed active TB disease over a 10- year time period. Model-projected incidence in the absence of additional interventions was highly variable (range: 33-369 cases) over 10 years. Compared to the 'no additional intervention' scenario, reducing the time between onset of active TB disease and initiation of treatment reduced both the number of new TB infections (47% reduction, relative risk of TB = 0.53) and diagnoses of active TB disease (19% reduction, relative risk of TB = 0.81). Expanding general population screening was also projected to reduce the burden of TB, although these findings were sensitive to assumptions around the relative amount of transmission occurring outside of households. Other potential interventions examined in the model (school-based screening, rapid contact tracing, and reduced household density) were found to have limited effectiveness. In a region of northern Canada experiencing a significant TB burden, more rapid treatment initiation in active TB cases was the most impactful intervention evaluated. Mathematical modeling can provide guidance for allocation of limited resources in a way that minimizes disease transmission and protects population health.

Novel Song-Stimulated Dendritic Spine Formation and Arc/Arg 3.1 Expression in Zebra Finch Auditory Telencephalon are Disrupted by Cannabinoid Agonism

PubMed Central

Gilbert, Marcoita T; Soderstrom, Ken

2013-01-01

Cannabinoids are well-established to alter processes of sensory perception; however neurophysiological mechanisms responsible remain unclear. Arc, an immediate-early gene (IEG) product involved in dendritic spine dynamics and necessary for plasticity changes such as long-term potentiation, is rapidly induced within zebra finch caudal medial nidopallium (NCM) following novel song exposure, a response that habituates after repeated stimuli. Arc appears unique in its rapid postsynaptic dendritic expression following excitatory input. Previously, we found that vocal development-altering cannabinoid treatments are associated with elevated dendritic spine densities in motor- (HVC) and learning-related (Area X) song regions of zebra finch telencephalon. Given Arc’s dendritic morphological role, we hypothesized that cannabinoid-altered spine densities may involve Arc-related signaling. To test this, we examined the ability of the cannabinoid agonist WIN55212-2 (WIN) to: (1) acutely disrupt song-induced Arc expression; (2) interfere with habituation to auditory stimuli and; (3) alter dendritic spine densities in auditory regions. We found that WIN (3 mg/kg) acutely reduced Arc expression within both NCM and Field L2 in an antagonist-reversible manner. WIN did not alter Arc expression in thalamic auditory relay Nucleus Ovoidalis (Ov), suggesting cannabinoid signaling selectively alters responses to auditory stimulation. Novel song stimulation rapidly increased dendritic spine densities within auditory telencephalon, an effect blocked by WIN pretreatments. Taken together, cannabinoid inhibition of both Arc induction and its habituation to repeated stimuli, combined with prevention of rapid increases in dendritic spine densities, implicates cannabinoid signaling in modulation of physiological processes important to auditory responsiveness and memory. PMID:24134952

Rapid diagnostic tests duo as alternative to conventional serological assays for conclusive Chagas disease diagnosis.

PubMed

Egüez, Karina E; Alonso-Padilla, Julio; Terán, Carolina; Chipana, Zenobia; García, Wilson; Torrico, Faustino; Gascon, Joaquim; Lozano-Beltran, Daniel-Franz; Pinazo, María-Jesús

2017-04-01

Chagas disease is caused by the parasite Trypanosoma cruzi. It affects several million people, mainly in Latin America, and severe cardiac and/or digestive complications occur in ~30% of the chronically infected patients. Disease acute stage is mostly asymptomatic and infection goes undiagnosed. In the chronic phase direct parasite detection is hampered due to its concealed presence and diagnosis is achieved by serological methods, like ELISA or indirect hemagglutination assays. Agreement in at least two tests must be obtained due to parasite wide antigenic variability. These techniques require equipped labs and trained personnel and are not available in distant regions. As a result, many infected people often remain undiagnosed until it is too late, as the two available chemotherapies show diminished efficacy in the advanced chronic stage. Easy-to-use rapid diagnostic tests have been developed to be implemented in remote areas as an alternative to conventional tests. They do not need electricity, nor cold chain, they can return results within an hour and some even work with whole blood as sample, like Chagas Stat-Pak (ChemBio Inc.) and Chagas Detect Plus (InBIOS Inc.). Nonetheless, in order to qualify a rapidly diagnosed positive patient for treatment, conventional serological confirmation is obligatory, which might risk its start. In this study two rapid tests based on distinct antigen sets were used in parallel as a way to obtain a fast and conclusive Chagas disease diagnosis using whole blood samples. Chagas Stat-Pak and Chagas Detect Plus were validated by comparison with three conventional tests yielding 100% sensitivity and 99.3% specificity over 342 patients seeking Chagas disease diagnosis in a reference centre in Sucre (Bolivia). Combined used of RDTs in distant regions could substitute laborious conventional serology, allowing immediate treatment and favouring better adhesion to it.

A Green Synthesis of Carbon Nanoparticle from Honey for Real-Time Photoacoustic Imaging.

PubMed

Wu, Lina; Cai, Xin; Nelson, Kate; Xing, Wenxin; Xia, Jun; Zhang, Ruiying; Stacy, Allen J; Luderer, Micah; Lanza, Gregory M; Wang, Lihong V; Shen, Baozhong; Pan, Dipanjan

2013-01-01

Imaging sentinel lymph nodes (SLN) could provide us with critical information about the progression of a cancerous disease. Real-time high-resolution intraoperative photoacoustic imaging (PAI) in conjunction with a near infrared (NIR) probe may offer the opportunities for the immediate imaging for direct identification and resection of SLN or collecting tissue samples. In this work a commercially amenable synthetic methodology is revealed for developing luminescent carbon nanoparticles with rapid clearance properties. A one-pot "green" technique is pursued, which involved rapid surface passivation of carbon nanoparticles with organic macromolecules (e.g. polysorbate, polyethyleneglycol) in a solvent free condition. Interestingly, the naked carbon nanoparticles are derived for the first time, from commercial food grade honey. Surface coated particles are markedly smaller (~7 nm) than the previously explored particles (gold, SWNT, copper) for SLN imaging. Results indicate an exceptionally rapid signal enhancement (~2 min) of the SLN. Owing to their strong optical absorption in the near infrared region, tiny size and rapid lymphatic transport, this platform offers great potential for faster resection of SLN and may lower complications caused by axillary investigation for mismarking with dyes or low-resolution imaging techniques.

Identification on Membrane and Characterization of Phosphoproteins Using an Alkoxide-Bridged Dinuclear Metal Complex as a Phosphate-Binding Tag Molecule

PubMed Central

Nakanishi, Tsuyoshi; Ando, Eiji; Furuta, Masaru; Kinoshita, Eiji; Kinoshita-Kikuta, Emiko; Koike, Tohru; Tsunasawa, Susumu; Nishimura, Osamu

2007-01-01

We have developed a method for on-membrane direct identification of phosphoproteins, which are detected by a phosphate-binding tag (Phos-tag) that has an affinity to phosphate groups with a chelated Zn2+ ion. This rapid profiling approach for phosphoproteins combines chemical inkjet technology for microdispensing of reagents onto a tiny region of target proteins with mass spectrometry for on-membrane digested peptides. Using this method, we analyzed human epidermoid carcinoma cell lysates of A-431 cells stimulated with epidermal growth factor, and identified six proteins with intense signals upon affinity staining with the phosphate-binding tag. It was already known that these proteins are phosphorylated, and our new approach proved to be effective at rapid profiling of phosphoproteins. Furthermore, we tried to determine their phosphorylation sites by MS/MS analysis after in-gel digestion of the corresponding spots on the 2DE gel to the rapid on-membrane identifications. As one example of use of information gained from the rapid-profiling approach, we successfully characterized a phosphorylation site at Ser-113 on prostaglandin E synthase 3. PMID:18166671

A recombinase polymerase amplification assay for rapid detection of Crimean-Congo Haemorrhagic fever Virus infection

PubMed Central

Afrough, Babak; Mullojonova, Manija; Dzhuraeva, Viktoriya; Tishkova, Farida; Hewson, Roger

2017-01-01

Background Crimean-Congo Haemorrhagic fever Virus (CCHFV) is a rapidly emerging vector-borne pathogen and the cause of a virulent haemorrhagic fever affecting large parts of Europe, Africa, the Middle East and Asia. Methodology/principle findings An isothermal recombinase polymerase amplification (RPA) assay was successfully developed for molecular detection of CCHFV. The assay showed rapid (under 10 minutes) detection of viral extracts/synthetic virus RNA of all 7 S-segment clades of CCHFV, with high target specificity. The assay was shown to tolerate the presence of inhibitors in crude preparations of mock field samples, indicating that this assay may be suitable for use in the field with minimal sample preparation. The CCHFV RPA was successfully used to screen and detect CCHFV positives from a panel of clinical samples from Tajikistan. Conclusions/significance The assay is a rapid, isothermal, simple-to-perform molecular diagnostic, which can be performed on a light, portable real-time detection device. It is ideally placed therefore for use as a field-diagnostic or in-low resource laboratories, for monitoring of CCHF outbreaks at the point-of-need, such as in remote rural regions in affected countries. PMID:29028804

Calibration of the ARID robot

NASA Technical Reports Server (NTRS)

Doty, Keith L

1992-01-01

The author has formulated a new, general model for specifying the kinematic properties of serial manipulators. The new model kinematic parameters do not suffer discontinuities when nominally parallel adjacent axes deviate from exact parallelism. From this new theory the author develops a first-order, lumped-parameter, calibration-model for the ARID manipulator. Next, the author develops a calibration methodology for the ARID based on visual and acoustic sensing. A sensor platform, consisting of a camera and four sonars attached to the ARID end frame, performs calibration measurements. A calibration measurement consists of processing one visual frame of an accurately placed calibration image and recording four acoustic range measurements. A minimum of two measurement protocols determine the kinematics calibration-model of the ARID for a particular region: assuming the joint displacements are accurately measured, the calibration surface is planar, and the kinematic parameters do not vary rapidly in the region. No theoretical or practical limitations appear to contra-indicate the feasibility of the calibration method developed here.

Promising Practices in Building Geospatial Academic Pathways and Educator Capacity: Findings from a Multiyear Evaluation Study.

NASA Astrophysics Data System (ADS)

Peery, B.; Wilkerson, S.

2015-12-01

Geospatial technology, including geographical information systems, global positioning systems, remote sensing and the analysis and interpretation of spatial data, is a rapidly growing industry in the United States and touches almost every discipline from business to the environment to health and sciences. The demand for a larger and more qualified geospatial workforce is simultaneously increasing. The GeoTEd project aims to meet this demand in Virginia and the surrounding region by 1) developing academic-to-workforce pathways, 2) providing professional development for educators, and 3) increasing student participation and impact. Since 2009, Magnolia Consulting has been evaluating the GeoTEd project, particularly its professional development work through the GeoTEd Institute. This presentation will provide a look into the challenges and successes of GeoTEd, and examine its impact on the geospatial academic pathways in the Virginia region. The presentation will highlight promising elements of this project that could serve as models for other endeavors.

Climate in Context - How partnerships evolve in regions

NASA Astrophysics Data System (ADS)

Parris, A. S.

2014-12-01

In 2015, NOAA's RISA program will celebrate its 20th year of exploration in the development of usable climate information. In the mid-1990s, a vision emerged to develop interdisciplinary research efforts at the regional scale for several important reasons. Recognizable climate patterns, such as the El Nino Southern Oscillation (ENSO), emerge at the regional level where our understanding of observations and models coalesce. Critical resources for society are managed in a context of regional systems, such as water supply and human populations. Multiple scales of governance (local, state, and federal) with complex institutional relationships can be examined across a region. Climate information (i.e. data, science, research etc) developed within these contexts has greater potential for use. All of this work rests on a foundation of iterative engagement between scientists and decision makers. Throughout these interactions, RISAs have navigated diverse politics, extreme events and disasters, socio-economic and ecological disruptions, and advances in both science and technology. Our understanding of information needs is evolving into a richer understanding of complex institutional, legal, political, and cultural contexts within which people can use science to make informed decisions. The outcome of RISA work includes both cases where climate information was used in decisions and cases where capacity for using climate information and making climate resilient decisions has increased over time. In addition to balancing supply and demand of scientific information, RISAs are engaged in a social process of reconciling climate information use with important drivers of society. Because partnerships are critical for sustained engagement, and because engagement is critically important to the use of science, the rapid development of new capacity in regionally-based science programs focused on providing climate decision support is both needed and challenging. New actors can bolster existing partnerships, but also impact trust developed through engagement. Examining other partnership-driven science initiatives, such as Digital Coast or NIDIS, can help identify critical elements of governance and network management that could be applied to the regional climate programs.

Region V Transportation Workforce Assessment and Summit

DOT National Transportation Integrated Search

2017-05-01

The transportation workforce is undergoing unprecedented change due to rapid retirement of baby boomers while at the same time information, communication, and automation technologies are rapidly changing the transportation of people and goods. The pu...

Global scientific collaboration in COPD research.

PubMed

Su, Yanbing; Long, Chao; Yu, Qi; Zhang, Juan; Wu, Daisy; Duan, Zhiguang

2017-01-01

This study aimed to investigate the multiple collaboration types, quantitatively evaluate the publication trends and review the performance of institutions or countries (regions) across the world in COPD research. Scientometric methods and social network analysis were used to survey the development of publication trends and understand current collaboration in the field of COPD research based on the Web of Science publications during the past 18 years. The number of publications developed through different collaboration types has increased. Growth trends indicate that the percentage of papers authored through multinational and domestic multi-institutional collaboration (DMIC) have also increased. However, the percentage of intra-institutional collaboration and single-authored (SA) studies has reduced. The papers that produced the highest academic impact result from international collaboration. The second highest academic impact papers are produced by DMIC. Out of the three, the papers that are produced by SA studies have the least amount of impact upon the scientific community. A handful of internationally renowned institutions not only take the leading role in the development of the research within their country (region) but also play a crucial role in international research collaboration in COPD. Both the amount of papers produced and the amount of cooperation that occurs in each study are disproportionally distributed between high-income countries (regions) and low-income countries (regions). Growing attention has been generated toward research on COPD from more and more different academic domains. Despite the rapid development in COPD research, collaboration in the field of COPD research still has room to grow, especially between different institutions or countries (regions), which would promote the progress of global COPD research.

Uncovering regional disparity of China's water footprint and inter-provincial virtual water flows.

PubMed

Dong, Huijuan; Geng, Yong; Fujita, Tsuyoshi; Fujii, Minoru; Hao, Dong; Yu, Xiaoman

2014-12-01

With rapid economic development in China, water crisis is becoming serious and may impede future sustainable development. The uneven distribution of water resources further aggravates such a problem. Under such a circumstance, the concepts of water footprint and virtual water have been proposed in order to respond water scarcity problems. This paper focuses on studying provincial disparity of China's water footprints and inter-provincial virtual water trade flows by adopting inter-regional input-output (IRIO) method. The results show that fast developing areas with larger economic scales such as Guangdong, Jiangsu, Shandong, Zhejiang, Shanghai and Xinjiang had the largest water footprints. The most developed and water scarce areas such as Shanghai, Beijing, Tianjin and Shandong intended to import virtual water, a rational choice for mitigating their water crisis. Xinjiang, Jiangsu, Heilongjiang, Inner Mongolia, Guangxi and Hunan, had the largest per GDP water intensities and were the main water import regions. Another key finding is that agriculture water footprint was the main part in water footprint composition and water export trade. On the basis of these findings, policy implications on agriculture geographical dispersion, consumption behavior changes, trade structure adjustment and water use efficiency improvement are further discussed. Copyright © 2014 Elsevier B.V. All rights reserved.

A simple and rapid technique for the authentication of the ginseng cultivar, Yunpoong, using an SNP marker in a large sample of ginseng leaves.

PubMed

Sun, Hua; Wang, Hong-Tao; Kwon, Woo-Saeng; Kim, Yeon-Ju; In, Jun-Gyo; Yang, Deok-Chun

2011-11-01

Yunpoong is an important Korean ginseng (Panax ginseng C. A. Meyer) cultivar, but no molecular marker has been available to identify Yunpoong from other cultivars. In this study, we developed a single nucleotide polymorphism (SNP) marker for Yunpoong based on analysis of expressed sequence tags (ESTs) in an exon region of the glyceraldehyde 3-phosphate dehydrogenase (GAPDH) gene. This SNP marker had high specificity to authenticate Yunpoong in twelve different main ginseng cultivars. For application of the molecular marker, a rapid identification method was established based on the NaOH-Tris method and real-time polymerase chain reaction (PCR) in order to ensure more efficiency in the cultivar selection. The biggest feature of the NaOH-Tris method was that it made the extraction of DNA very simple and rapid in young leaf tissues. We only spent 1 min to extract DNA and directly used it to do PCR. In this report, the conventional DNA extraction method was used to develop molecular marker process, and the NaOH-Tris method was applied in screening large numbers of cultivars. Moreover, the greatest advantage of the real-time PCR compared with traditional PCR, is time saving and high efficiency. Thus, this strategy provides a rapid and reliable method for the specific identification of Yunpoong in a large number of samples. Copyright © 2011 Elsevier B.V. All rights reserved.

Barotropic Tidal Predictions and Validation in a Relocatable Modeling Environment. Revised

NASA Technical Reports Server (NTRS)

Mehra, Avichal; Passi, Ranjit; Kantha, Lakshmi; Payne, Steven; Brahmachari, Shuvobroto

1998-01-01

Under funding from the Office of Naval Research (ONR), and the Naval Oceanographic Office (NAVOCEANO), the Mississippi State University Center for Air Sea Technology (CAST) has been working on developing a Relocatable Modeling Environment(RME) to provide a uniform and unbiased infrastructure for efficiently configuring numerical models in any geographic/oceanic region. Under Naval Oceanographic Office (NAVO-CEANO) funding, the model was implemented and tested for NAVOCEANO use. With our current emphasis on ocean tidal modeling, CAST has adopted the Colorado University's numerical ocean model, known as CURReNTSS (Colorado University Rapidly Relocatable Nestable Storm Surge) Model, as the model of choice. During the RME development process, CURReNTSS has been relocated to several coastal oceanic regions, providing excellent results that demonstrate its veracity. This report documents the model validation results and provides a brief description of the Graphic user Interface (GUI).

Contaminants in the coastal karst aquifer system along the Caribbean coast of the Yucatan Peninsula, Mexico.

PubMed

Metcalfe, Chris D; Beddows, Patricia A; Bouchot, Gerardo Gold; Metcalfe, Tracy L; Li, Hongxia; Van Lavieren, Hanneke

2011-04-01

Intensive land development as a result of the rapidly growing tourism industry in the "Riviera Maya" region of the Yucatan Peninsula, Mexico may result in contamination of groundwater resources that eventually discharge into Caribbean coastal ecosystems. We deployed two types of passive sampling devices into groundwater flowing through cave systems below two communities to evaluate concentrations of contaminants and to indicate the possible sources. Pharmaceuticals and personal care products accumulated in the samplers could only have originated from domestic sewage. PAHs indicated contamination by runoff from highways and other impermeable surfaces and chlorophenoxy herbicides accumulated in samplers deployed near a golf course indicated that pesticide applications to turf are a source of contamination. Prevention and mitigation measures are needed to ensure that expanding development does not impact the marine environment and human health, thus damaging the tourism-based economy of the region. Copyright © 2010 Elsevier Ltd. All rights reserved.

Contrasting trends in light pollution across Europe based on satellite observed night time lights.

PubMed

Bennie, Jonathan; Davies, Thomas W; Duffy, James P; Inger, Richard; Gaston, Kevin J

2014-01-21

Since the 1970s nighttime satellite images of the Earth from space have provided a striking illustration of the extent of artificial light. Meanwhile, growing awareness of adverse impacts of artificial light at night on scientific astronomy, human health, ecological processes and aesthetic enjoyment of the night sky has led to recognition of light pollution as a significant global environmental issue. Links between economic activity, population growth and artificial light are well documented in rapidly developing regions. Applying a novel method to analysis of satellite images of European nighttime lights over 15 years, we show that while the continental trend is towards increasing brightness, some economically developed regions show more complex patterns with large areas decreasing in observed brightness over this period. This highlights that opportunities exist to constrain and even reduce the environmental impact of artificial light pollution while delivering cost and energy-saving benefits.

Functional Neuroanatomical Evidence for the Double-Deficit Hypothesis of Developmental Dyslexia

PubMed Central

Norton, Elizabeth S.; Black, Jessica M.; Stanley, Leanne M.; Tanaka, Hiroko; Gabrieli, John D. E.; Sawyer, Carolyn; Hoeft, Fumiko

2015-01-01

The double-deficit hypothesis of dyslexia posits that both rapid naming and phonological impairments can cause reading difficulties, and that individuals who have both of these deficits show greater reading impairments compared to those with a single deficit. Despite extensive behavioral research, the brain basis of poor reading with a double-deficit has never been investigated. The goal of the study was to evaluate the double-deficit hypothesis using functional MRI. Activation patterns during a printed word rhyme judgment task in 90 children with a wide range of reading abilities showed dissociation between brain regions that were sensitive to phonological awareness (left inferior frontal and inferior parietal regions) and rapid naming (right cerebellar lobule VI). More specifically, the double-deficit group showed less activation in the fronto-parietal reading network compared to children with only a deficit in phonological awareness, who in turn showed less activation than the typically-reading group. On the other hand, the double-deficit group showed less cerebellar activation compared to children with only a rapid naming deficit, who in turn showed less activation than the typically-reading children. Functional connectivity analyses revealed that bilateral prefrontal regions were key for linking brain regions associated with phonological awareness and rapid naming, with the double-deficit group being the most aberrant in their connectivity. Our study provides the first functional neuroanatomical evidence for the double-deficit hypothesis of developmental dyslexia. PMID:24953957

Spatio-temporal Variations and Source Contributions of China's Premature Deaths Attributable to Ambient PM2.5

NASA Astrophysics Data System (ADS)

Rong, X.; Wang, H.

2016-12-01

With rapid economic growth, China has witnessed increasingly frequent and severe haze and smog episodes over the past decade, posing serious health impacts to the Chinese population, especially those in densely populated city clusters. Quantifications of the spatial and temporal variations of health impacts attributed to ambient fine particulate matter (PM2.5) are not only important for designing effective strategies in mitigating the health damage of air pollution, but also provide valuable references for other developing regions in the world. In this study, we evaluated the spatial distribution of premature deaths in China between 2000 and 2014 attributed to ambient PM2.5 in accord with Global Burden of Disease (GBD) based on a high resolution population density map, satellite retrieved PM2.5 concentration, and provincial health data. An Integrated Exposure Response (IER) model was applied to analyze the premature deaths for four leading causes (ischemic heart disease (IHD), chronic obstructive pulmonary disease (COPD), lung cancer (LC), stroke) in China. The contributions of emission sources to air pollution and related mortality burdens across China were further evaluated by incorporating CMAQ model. Our results suggest that China's anthropogenic ambient PM2.5 led to 1,255,400 premature deaths in 2010, 42% higher than the level in 2000. Besides the increased PM2.5 concentration, rapid urbanization has been attracting large population migration into the more developed eastern coastal urban areas, intensifying the overall health impacts. Our analysis implies that the health burdens were exacerbated in some developing inner provinces with high population density (e.g. Henan, Anhui, Sichuan) because of the relocation of more polluting and resource-intensive industries into these regions. China's regulations on PM2.5 should not be loosened on inner provinces to avoid such national level environmental inequities, and furthermore policies should be designed to form incentive mechanisms to transfer advanced technologies of production and emissions control from the coastal regions to the interior regions. Finally, we discussed the contributions of various emission sources (e.g., power plant, transportation, industries, residential) to premature deaths due to ambient PM2.5 across China.

Trends in normalized difference vegetation index (NDVI) associated with urban development in northern West Siberia

NASA Astrophysics Data System (ADS)

Esau, Igor; Miles, Victoria V.; Davy, Richard; Miles, Martin W.; Kurchatova, Anna

2016-08-01

Exploration and exploitation of oil and gas reserves of northern West Siberia has promoted rapid industrialization and urban development in the region. This development leaves significant footprints on the sensitive northern environment, which is already stressed by the global warming. This study reports the region-wide changes in the vegetation cover as well as the corresponding changes in and around 28 selected urbanized areas. The study utilizes the normalized difference vegetation index (NDVI) from high-resolution (250 m) MODIS data acquired for summer months (June through August) over 15 years (2000-2014). The results reveal the increase of NDVI (or "greening") over the northern (tundra and tundra-forest) part of the region. Simultaneously, the southern, forested part shows the widespread decrease of NDVI (or "browning"). These region-wide patterns are, however, highly fragmented. The statistically significant NDVI trends occupy only a small fraction of the region. Urbanization destroys the vegetation cover within the developed areas and at about 5-10 km distance around them. The studied urbanized areas have the NDVI values by 15 to 45 % lower than the corresponding areas at 20-40 km distance. The largest NDVI reduction is typical for the newly developed areas, whereas the older areas show recovery of the vegetation cover. The study reveals a robust indication of the accelerated greening near the older urban areas. Many Siberian cities become greener even against the wider browning trends at their background. Literature discussion suggests that the observed urban greening could be associated not only with special tending of the within-city green areas but also with the urban heat islands and succession of more productive shrub and tree species growing on warmer sandy soils.

Implementation of a Regional Training Program on African Swine Fever As Part of the Cooperative Biological Engagement Program across the Caucasus Region

PubMed Central

De Nardi, Marco; Léger, Anaïs; Stepanyan, Tatul; Khachatryan, Bagrat; Karibayev, Talgat; Sytnik, Igor; Tyulegenov, Samat; Akhmetova, Assel; Nychyk, Serhiy; Sytiuk, Mykola; Nevolko, Oleg; Datsenko, Roman; Chaligava, Tengiz; Avaliani, Lasha; Parkadze, Otar; Ninidze, Lena; Kartskhia, Natia; Napetvaridze, Tsira; Asanishvili, Zviad; Khelaia, Demna; Menteshashvili, Ioseb; Zadayan, Meruzhan; Niazyan, Lyudmila; Mykhaylovska, Nataliya; Brooks, Bradford Raymond; Zhumabayeva, Gulnara; Satabayeva, Saltanat; Metreveli, Magda; Gallagher, Theresa; Obiso, Richard

2017-01-01

A training and outreach program to increase public awareness of African swine fever (ASF) was implemented by Defense Threat Reduction Agency and the Ministries of Agriculture in Armenia, Georgia, Kazakhstan, and Ukraine. The implementing agency was the company SAFOSO (Switzerland). Integration of this regional effort was administered by subject matter experts for each country. The main teaching effort of this project was to develop a comprehensive regional public outreach campaign through a network of expertise and knowledge for the control and prevention of ASF in four neighboring countries that experience similar issues with this disease. Gaps in disease knowledge, legislation, and outbreak preparedness in each country were all addressed. Because ASF is a pathogen with bioterrorism potential and of great veterinary health importance that is responsible for major economic instability, the project team developed public outreach programs to train veterinarians in the partner countries to accurately and rapidly identify ASF activity and report it to international veterinary health agencies. The project implementers facilitated four regional meetings to develop this outreach program, which was later disseminated in each partner country. Partner country participants were trained as trainers to implement the outreach program in their respective countries. In this paper, we describe the development, execution, and evaluation of the ASF training and outreach program that reached more than 13,000 veterinarians, farmers, and hunters in the partner countries. Additionally, more than 120,000 booklets, flyers, leaflets, guidelines, and posters were distributed during the outreach campaign. Pre- and post-ASF knowledge exams were developed. The overall success of the project was demonstrated in that the principles of developing and conducting a public outreach program were established, and these foundational teachings can be applied within a single country or expanded regionally to disseminate disease information across borders; overall, this method can be modified to raise awareness about many other diseases. PMID:29124058

Development of polymerase chain reaction-based diagnostic tests for detection of Malsoor virus & adenovirus isolated from Rousettus species of bats in Maharashtra, India.

PubMed

Shete, Anita M; Yadav, Pragya; Kumar, Vimal; Nikam, Tushar; Mehershahi, Kurosh; Kokate, Prasad; Patil, Deepak; Mourya, Devendra T

2017-01-01

Bats are recognized as important reservoirs for emerging infectious disease and some unknown viral diseases. Two novel viruses, Malsoor virus (family Bunyaviridae, genus, Phlebovirus) and a novel adenovirus (AdV) (family, Adenoviridae genus, Mastadenovirus), were identified from Rousettus bats in the Maharashtra State of India. This study was done to develop and optimize real time reverse transcription - polymerase chain reaction (RT-PCR) assays for Malsoor virus and real time and nested PCR for adenovirus from Rousettus bats. For rapid and accurate screening of Malsoor virus and adenovirus a nested polymerase chain reaction and TaqMan-based real-time PCR were developed. Highly conserved region of nucleoprotein gene of phleboviruses and polymerase gene sequence from the Indian bat AdV isolate polyprotein gene were selected respectively for diagnostic assay development of Malsoor virus and AdV. Sensitivity and specificity of assays were calculated and optimized assays were used to screen bat samples. Molecular diagnostic assays were developed for screening of Malsoor virus and AdV and those were found to be specific. Based on the experiments performed with different parameters, nested PCR was found to be more sensitive than real-time PCR; however, for rapid screening, real-time PCR can be used and further nested PCR can be used for final confirmation or in those laboratories where real-time facility/expertise is not existing. This study reports the development and optimization of nested RT-PCR and a TaqMan-based real-time PCR for Malsoor virus and AdV. The diagnostic assays can be used for rapid detection of these novel viruses to understand their prevalence among bat population.

Substantial impacts of landscape changes on summer climate with major regional differences: The case of China.

PubMed

Cao, Qian; Yu, Deyong; Georgescu, Matei; Wu, Jianguo

2018-06-01

China's rapid socioeconomic development during the past few decades has resulted in large-scale landscape changes across the country. However, the impacts of these land surface modifications on climate are yet to be adequately understood. Using a coupled process-based land-atmospheric model, therefore, we quantified the climatic effects of land cover and land management changes over mainland China from 2001 to 2010, via incorporation of real-time and high-quality satellite-derived landscape representation (i.e., vegetation fraction, leaf area index, and albedo) into numerical modeling. Our results show that differences in landscape patterns due to changes in land cover and land management have exerted a strong influence on summer climate in China. During 2001 and 2010, extensive cooling of up to 1.5°C was found in the Loess Plateau and 1.0°C in northeastern China. In contrast, regional-scale warming was detected in the Tibetan Plateau (0.3°C), Yunnan province (0.4°C), and rapidly expanding urban centers across China (as high as 2°C). Summer precipitation decreased in the northeastern region, with patchy reduction generally <1.8mm/day, but increased in the Loess Plateau, with local spikes up to 2.4mm/day. Our study highlights that human alterations of landscapes have had substantial impacts on summer climate over the entire mainland China, but these impacts varied greatly on the regional scale, including changes in opposite directions. Therefore, effective national-level policies and regional land management strategies for climate change mitigation and adaptation should take explicit account of the spatial heterogeneity of landscape-climate interactions. Copyright © 2017 Elsevier B.V. All rights reserved.

Automated seamline detection along skeleton for remote sensing image mosaicking

NASA Astrophysics Data System (ADS)

Zhang, Hansong; Chen, Jianyu; Liu, Xin

2015-08-01

The automatic generation of seamline along the overlap region skeleton is a concerning problem for the mosaicking of Remote Sensing(RS) images. Along with the improvement of RS image resolution, it is necessary to ensure rapid and accurate processing under complex conditions. So an automated seamline detection method for RS image mosaicking based on image object and overlap region contour contraction is introduced. By this means we can ensure universality and efficiency of mosaicking. The experiments also show that this method can select seamline of RS images with great speed and high accuracy over arbitrary overlap regions, and realize RS image rapid mosaicking in surveying and mapping production.

Robust Water Supply Infrastructure Development Pathways: What, When and Where Matters the Most? (INVITED)

NASA Astrophysics Data System (ADS)

Reed, Patrick; Zeff, Harrison; Characklis, Gregory

2017-04-01

Water supply adaptation frameworks that seek robustness must adaptively trigger actions that are contextually appropriate to emerging system observations and avoid long term high regret lock-ins. As an example, emerging water scarcity concerns in southeastern United States are associated with several deeply uncertain factors, including rapid population growth, limited coordination across adjacent municipalities and the increasing risks for sustained regional droughts. Managing these uncertainties will require that regional water utilities identify regionally coordinated, scarcity-mitigating infrastructure development pathways that trigger time appropriate actions. Mistakes can lead to water shortages, overbuilt stranded assets and possibly financial failures. This presentation uses the Research Triangle area of North Carolina to illustrate the key concerns and challenges that emerged when helping Raleigh, Durham, Cary and Chapel Hill develop their long term water supply infrastructure pathways through 2060. This example shows how the region's water utilities' long term infrastructure pathways are strongly shaped by their short term conservation policies (i.e., reacting to evolving demands) and their ability to consider regional water transfers (i.e., reacting to supply imbalances). Cooperatively developed, shared investments across the four municipalities expand their capacity to use short term transfers to better manage severe droughts with fewer investments in irreversible infrastructure options. Cooperative pathways are also important for avoiding regional robustness conflicts, where one party benefits strongly at the expense of one or more the others. A significant innovation of this work is the exploitation of weekly and annual dynamic risk-of-failure action triggers that exploit evolving feedbacks between co-evolving human demands and regional supplies. These dynamic action triggers provide high levels of adaptivity, tailor actions to their specific context, and motivate the value of joint human—natural system observation systems. The insights from this work have general merit globally for urban regions where adjacent municipalities can benefit from cooperative planning.

Linking ShakeMap and Emergency Managers in the Utah Region

NASA Astrophysics Data System (ADS)

Pankow, K.; Bausch, D.; Carey, B.

2007-12-01

In 2001, the University of Utah Seismograph Stations (UUSS) locally customized and began producing automatic ShakeMaps in Utah's Wasatch Front urban corridor as part of a new real-time earthquake information system developed under the Advanced National Seismic System. In 2005, motivated by requests from Utah's Division of Homeland Security and FEMA, ShakeMap capabilities were expanded to cover the entire Utah region. Now in 2007, ShakeMap capabilities throughout the region will again be enhanced by increased station coverage. The increased station coverage comes both from permanent stations funded by a state initiative and from the temporary deployment of EarthScope USArray stations. The state initiative will add ~22 strong-motion instruments and ~10 broadband instruments to the UUSS network. The majority of these stations will be located in southwestern Utah--one of the fastest growing regions in the U.S. EarthScope will evenly distribute 70 broadband stations in the region during 2007 that will be removed after 18 to 24 months. In addition to the enhanced station coverage for producing ShakeMaps in the Utah region, the transfer of information to the emergency response community is also being enhanced. First, tools are being developed that will link ShakeMap data with HAZUS loss-estimation software in near-real-time for rapid impact assessment. Second, ShakeMap scenarios are being used in conjunction with HAZUS loss-estimation software to produce customized maps for planning and preparedness exercises and also for developing templates that can be used following a significant regional earthquake. With the improvements to ShakeMap and the improved dialogue with the emergency managers, a suite of maps and information products were developed based on scenario earthquakes for training and exercise purposes. These products will be available in a timely fashion following a significant earthquake in the Utah region.

Modeling the Local Ecological Response to Regional Landscape and Global Change Forcings: A Case Study of Bioenergy in North Carolina, USA

NASA Astrophysics Data System (ADS)

Terando, A. J.; Costanza, J. K.; Tarr, N. M.; Apt, R.; Rubino, M. J.

2015-12-01

Sustainable energy policies in Europe have led to a growing market for bioenergy, and especially wood pellets, as a means to reduce fossil fuel emissions and the attendant socio-environmental consequences from climate change. However the introduction of this market has the potential to create significant negative ecological impacts whose costs are borne far from Europe. Because of its existing forest products infrastructure and resources, the Southeast US is viewed as an attractive supplier of wood pellets to Europe. Consequently, a new global telecoupling has developed between these two regions linking the natural capital of one region to the energy needs and greenhouse gas abatement policy of the other. Additionally, habitat for many important wildlife species in the Southeast lie within a rapidly urbanizing region characterized by low-density auto-dependent growth. Combined, these two forcings have the potential to rapidly degrade species-rich ecosystems. Here the ecological effects of increased European demand for wood pellets are examined in North Carolina. Future land use and vegetation change were projected using the results from linked urbanization, vegetation dynamics, life cycle analysis, and forest timber economics models. Ecological impacts as measured for 16 amphibian and avian species were evaluated under five bioenergy production scenarios and one urbanization-only scenario. Results indicate that highly vagile or upland species are able to take advantage of the increase in vegetated land cover, even if the majority of new habitat is in intensively managed forests. Conversely, more sessile and range-limited species, particularly those found in coastal plain systems such as bottomland hardwood forest, show steeper declines under the wood pellet scenarios than under the urbanization-only scenario. These results highlight the challenge of evaluating the sustainability of developing markets that seek to mitigate certain aspects of global environmental change but risk exacerbating others.

On the EMSC and its roles in the Euro-Med region

NASA Astrophysics Data System (ADS)

Bossu, R.; Godey, S.; Mazet-Roux, G.

2009-04-01

The Euro-Med seismological Centre (EMSC) is a scientific non-profit NGO created back in 1975 by the seismological community to collate data, make them available and provide earthquake information at a Euro-Med and global scales. The aim of this talk is to provide an overview of the EMSC's activities and its roles in the integration of the seismological community. Its first activity has been rapid earthquake information on its web site (www.emsc-csem.org) as well as earthquake notification services (SMS, email) for potentially damaging earthquakes. More recently, online macroseismic questionnaires were introduced in more than 20 different languages as well as tools to collect pictures of the earthquake's effects from the public. An innovative way to map the area where an earthquake was felt within 5 to 8 minutes of its occurrence was developed. It plots the geographical origin of the observed surges of traffic following felt events. This method is now being implemented in several other institutes. The Euro-Med seismological bulletin, which started in 1998, complements this service by offering a reference bulletin for the region. It significantly improved the data availability especially on the fringes of the region and the data collection is now comprehensive. Thanks to its 84 institutes from 55 different countries, EMSC offers a significant networking capacity and it plays a significant role in the integration of our community in close collaboration with ORFEUS, the second European organisation in seismology. It devotes significant efforts to improve collaboration especially towards Northern Africa and the Middle East. For example, it recently led an EC-project to improve coordination of the earthquake surveillance of the Western Mediterranean region and improve data exchanges. It contributes to the initiation of the NERIES project. It is involved, within this framework, in improving accelerometric data availability, developing rapid loss estimates and it it is in charge, jointly with ORFEUS to implement and host the portal to access and explore seismological data and products.

An Integrated Genomic Approach for Rapid Delineation of Candidate Genes Regulating Agro-Morphological Traits in Chickpea

PubMed Central

Saxena, Maneesha S.; Bajaj, Deepak; Das, Shouvik; Kujur, Alice; Kumar, Vinod; Singh, Mohar; Bansal, Kailash C.; Tyagi, Akhilesh K.; Parida, Swarup K.

2014-01-01

The identification and fine mapping of robust quantitative trait loci (QTLs)/genes governing important agro-morphological traits in chickpea still lacks systematic efforts at a genome-wide scale involving wild Cicer accessions. In this context, an 834 simple sequence repeat and single-nucleotide polymorphism marker-based high-density genetic linkage map between cultivated and wild parental accessions (Cicer arietinum desi cv. ICC 4958 and Cicer reticulatum wild cv. ICC 17160) was constructed. This inter-specific genetic map comprising eight linkage groups spanned a map length of 949.4 cM with an average inter-marker distance of 1.14 cM. Eleven novel major genomic regions harbouring 15 robust QTLs (15.6–39.8% R2 at 4.2–15.7 logarithm of odds) associated with four agro-morphological traits (100-seed weight, pod and branch number/plant and plant hairiness) were identified and mapped on chickpea chromosomes. Most of these QTLs showed positive additive gene effects with effective allelic contribution from ICC 4958, particularly for increasing seed weight (SW) and pod and branch number. One robust SW-influencing major QTL region (qSW4.2) has been narrowed down by combining QTL mapping with high-resolution QTL region-specific association analysis, differential expression profiling and gene haplotype-based association/LD mapping. This enabled to delineate a strong SW-regulating ABI3VP1 transcription factor (TF) gene at trait-specific QTL interval and consequently identified favourable natural allelic variants and superior high seed weight-specific haplotypes in the upstream regulatory region of this gene showing increased transcript expression during seed development. The genes (TFs) harbouring diverse trait-regulating QTLs, once validated and fine-mapped by our developed rapid integrated genomic approach and through gene/QTL map-based cloning, can be utilized as potential candidates for marker-assisted genetic enhancement of chickpea. PMID:25335477

Changes in land use, climate and the environment during a period of rapid economic development in Jiangsu Province, China.

PubMed

Huang, Changchun; Zhang, Mingli; Zou, Jun; Zhu, A-Xing; Chen, Xia; Mi, Yin; Wang, Yanhua; Yang, Hao; Li, Yunmei

2015-12-01

Understanding changes in climate and environment on a regional scale can provide useful guidance for regional socio-economic development. The present study characterizes changes in the environment, climate, land use and cover types via in situ observed, statistical data and remote sensing images for Jiangsu Province, China, during the period 1980-2012. Statistical and spatial analyses indicate that the pace of urbanization in southern Jiangsu is more rapid than that in northern Jiangsu. Urbanization (92.7%) results primarily from the loss of farmland. While emissions of pollutants from industrial sources were well controlled, and wastewater, which more frequently derives from urban domestic sources, was found to be increasing. The rates of wastewater to population increased from 0.17±0.017 to 0.32±0.090 (billion ton/million persons) during the two periods of 1980-2000 and 2000-2012. However, the rates of wastewater to Gross Domestic Product (GDP) decreased from 0.26±0.20 to 0.014±0.009 (billion ton/billion Yuan), respectively. The significant increase in scattering radiance and Earth's albedo caused by the urbanization and its process (Pearson correlation coefficient (r) between urban land and scattering radiance=0.86, p<0.0001; r between farmland and scattering radiance=-0.92, p<0.0001) aggravates the warming in the regional scale. This correlation analysis indicates that temperature will decrease with the increase of woodland, grassland and farmland, and will increase with the increase of urbanized and unexploited lands. Added to warming caused by an increase in CO2, land use/cover change and human activities may be the primary reason for the rising temperatures in Jiangsu Province. The change in regional thermal conditions reduces both local humidity and land atmosphere flux exchange. The low atmosphere flux exhange contributes to the spread of atmospheric pollutants and the deposition of atmospheric particles. Copyright © 2015 Elsevier B.V. All rights reserved.

Adaptive evolution of centromere proteins in plants and animals.

PubMed

Talbert, Paul B; Bryson, Terri D; Henikoff, Steven

2004-01-01

Centromeres represent the last frontiers of plant and animal genomics. Although they perform a conserved function in chromosome segregation, centromeres are typically composed of repetitive satellite sequences that are rapidly evolving. The nucleosomes of centromeres are characterized by a special H3-like histone (CenH3), which evolves rapidly and adaptively in Drosophila and Arabidopsis. Most plant, animal and fungal centromeres also bind a large protein, centromere protein C (CENP-C), that is characterized by a single 24 amino-acid motif (CENPC motif). Whereas we find no evidence that mammalian CenH3 (CENP-A) has been evolving adaptively, mammalian CENP-C proteins contain adaptively evolving regions that overlap with regions of DNA-binding activity. In plants we find that CENP-C proteins have complex duplicated regions, with conserved amino and carboxyl termini that are dissimilar in sequence to their counterparts in animals and fungi. Comparisons of Cenpc genes from Arabidopsis species and from grasses revealed multiple regions that are under positive selection, including duplicated exons in some grasses. In contrast to plants and animals, yeast CENP-C (Mif2p) is under negative selection. CENP-Cs in all plant and animal lineages examined have regions that are rapidly and adaptively evolving. To explain these remarkable evolutionary features for a single-copy gene that is needed at every mitosis, we propose that CENP-Cs, like some CenH3s, suppress meiotic drive of centromeres during female meiosis. This process can account for the rapid evolution and the complexity of centromeric DNA in plants and animals as compared to fungi.

Adaptive evolution of centromere proteins in plants and animals

PubMed Central

Talbert, Paul B; Bryson, Terri D; Henikoff, Steven

2004-01-01

Background Centromeres represent the last frontiers of plant and animal genomics. Although they perform a conserved function in chromosome segregation, centromeres are typically composed of repetitive satellite sequences that are rapidly evolving. The nucleosomes of centromeres are characterized by a special H3-like histone (CenH3), which evolves rapidly and adaptively in Drosophila and Arabidopsis. Most plant, animal and fungal centromeres also bind a large protein, centromere protein C (CENP-C), that is characterized by a single 24 amino-acid motif (CENPC motif). Results Whereas we find no evidence that mammalian CenH3 (CENP-A) has been evolving adaptively, mammalian CENP-C proteins contain adaptively evolving regions that overlap with regions of DNA-binding activity. In plants we find that CENP-C proteins have complex duplicated regions, with conserved amino and carboxyl termini that are dissimilar in sequence to their counterparts in animals and fungi. Comparisons of Cenpc genes from Arabidopsis species and from grasses revealed multiple regions that are under positive selection, including duplicated exons in some grasses. In contrast to plants and animals, yeast CENP-C (Mif2p) is under negative selection. Conclusions CENP-Cs in all plant and animal lineages examined have regions that are rapidly and adaptively evolving. To explain these remarkable evolutionary features for a single-copy gene that is needed at every mitosis, we propose that CENP-Cs, like some CenH3s, suppress meiotic drive of centromeres during female meiosis. This process can account for the rapid evolution and the complexity of centromeric DNA in plants and animals as compared to fungi. PMID:15345035

Adoption of Geospatial Systems towards evolving Sustainable Himalayan Mountain Development

NASA Astrophysics Data System (ADS)

Murthy, M. S. R.; Bajracharya, B.; Pradhan, S.; Shestra, B.; Bajracharya, R.; Shakya, K.; Wesselmann, S.; Ali, M.; Bajracharya, S.; Pradhan, S.

2014-11-01

Natural resources dependence of mountain communities, rapid social and developmental changes, disaster proneness and climate change are conceived as the critical factors regulating sustainable Himalayan mountain development. The Himalayan region posed by typical geographic settings, diverse physical and cultural diversity present a formidable challenge to collect and manage data, information and understands varied socio-ecological settings. Recent advances in earth observation, near real-time data, in-situ measurements and in combination of information and communication technology have transformed the way we collect, process, and generate information and how we use such information for societal benefits. Glacier dynamics, land cover changes, disaster risk reduction systems, food security and ecosystem conservation are a few thematic areas where geospatial information and knowledge have significantly contributed to informed decision making systems over the region. The emergence and adoption of near-real time systems, unmanned aerial vehicles (UAV), board-scale citizen science (crowd-sourcing), mobile services and mapping, and cloud computing have paved the way towards developing automated environmental monitoring systems, enhanced scientific understanding of geophysical and biophysical processes, coupled management of socio-ecological systems and community based adaptation models tailored to mountain specific environment. There are differentiated capacities among the ICIMOD regional member countries with regard to utilization of earth observation and geospatial technologies. The region can greatly benefit from a coordinated and collaborative approach to capture the opportunities offered by earth observation and geospatial technologies. The regional level data sharing, knowledge exchange, and Himalayan GEO supporting geospatial platforms, spatial data infrastructure, unique region specific satellite systems to address trans-boundary challenges would go a long way in evolving sustainable Himalayan livelihoods.

Expression of Ascorbic Acid Oxidase in Zucchini Squash (Cucurbita pepo L.).

PubMed

Lin, L S; Varner, J E

1991-05-01

The expression of ascorbic acid oxidase was studied in zucchini squash (Cucurbita pepo L.), one of the most abundant natural sources of the enzyme. In the developing fruit, specific activity of ascorbic acid oxidase was highest between 4 and 6 days after anthesis. Protein and mRNA levels followed the same trend as enzyme activity. Highest growth rate of the fruit occurred before 6 days after anthesis. Within a given fruit, ascorbic acid oxidase activity and mRNA level were highest in the epidermis, and lowest in the central placental region. In leaf tissue, ascorbic acid oxidase activity was higher in young leaves, and very low in old leaves. Within a given leaf, enzyme activity was highest in the fast-growing region (approximately the lower third of the blade), and lowest in the slow-growing region (near leaf apex). High expression of ascorbic acid oxidase at a stage when rapid growth is occurring (in both fruits and leaves), and localization of the enzyme in the fruit epidermis, where cells are under greatest tension during rapid growth in girth, suggest that ascorbic acid oxidase might be involved in reorganization of the cell wall to allow for expansion. Based on the known chemistry of dehydroascorbic acid, the end product of the ascorbic acid oxidase-catalyzed reaction, we have proposed several hypotheses to explain how dehydroascorbic acid might cause cell wall "loosening."

South Texas coastal classification maps - Mansfield Channel to the Rio Grande

USGS Publications Warehouse

Morton, Robert A.; Peterson, Russell L.

2006-01-01

The Nation's rapidly growing coastal population requires reliable information regarding the vulnerability of coastal regions to storm impacts. This has created a need for classifying coastal lands and evaluating storm-hazard vulnerability. Government officials and resource managers responsible for dealing with natural hazards also need accurate assessments of potential storm impacts in order to make informed decisions before, during, and after major storm events. Both economic development and coastal-damage mitigation require integrated models of storm parameters, hazard vulnerability, and expected coastal responses. Thus, storm-hazard vulnerability assessments constitute one of the fundamental components of forecasting storm impacts. Each year as many as 10 to 12 hurricanes and tropical storms will be the focus of national attention. Of particular interest are intense hurricanes (Categories 3 to 5 of the Saffir-Simpson Hurricane Scale) that have the potential to cause substantial economic and environmental damage to the Atlantic and Gulf Coasts of the United States. These coastal regions include some of the largest metropolitan areas in the country and they continue to experience rapid population growth. Based on media reports, there is a general lack of public knowledge regarding how different coastal segments will respond to the same storm or how the same coastal segment will respond differently depending on storm conditions. A primary purpose of the USGS National Assessment of Coastal Change Project is to provide accurate representations of pre-storm ground conditions for areas that are designated high priority because they have dense populations or valuable resources that are at risk. A secondary purpose is to develop a broad coastal classification that, with only minor modification, can be applied to most coastal regions in the United States.

One century of air deposition of hydrocarbons recorded in travertine in North Tibetan Plateau, China: Sources and evolution.

PubMed

Yuan, Guo-Li; Wu, Ming-Zhe; Sun, Yong; Li, Jun; Li, Jing-Chao; Wang, Gen-Hou

2016-08-01

The characteristic distribution patterns of hydrocarbons have been used for fingerprinting to identify their sources. The historical air depositions of hydrocarbons recorded in natural media help to understand the evolution of the air environment. Travertine is a natural acceptor of air deposition that settles on the ground layer by layer. To reconstruct the historical air environment of hydrocarbons in the North Tibetan Plateau (NTP), a unique background region, twenty-seven travertine samples were collected systematically from a travertine column according to its precipitated year. For each sample, the precipitated year was dated while n-alkanes and polycyclic aromatic hydrocarbons (PAHs) were determined. Based on source identification, the air environment of hydrocarbons in the past century was studied for the region of NTP. Before World War II, the anthropogenic sources of hydrocarbons showed little influence on the air environment. During World War II and China's War of Liberation, hydrocarbons increased significantly, mainly from the use of fossil fuels. Between 1954 and 1963, hydrocarbons in the air decreased significantly because the sources of petroleum combustion decreased. From the mid-1960s through the end of the 1990s, air hydrocarbons, which mainly originated from biomass burning, increased gradually because agriculture and animal husbandry were developing steadily in Tibet and China. From the late 1990s, hydrocarbons in the atmosphere increased rapidly due to the rapid increase of tourism activities, which might increase hydrocarbon emissions from traffic. The reconstruction of the historical air hydrocarbons in NTP clearly reflects the evolution of the region and global development. Copyright © 2016 Elsevier B.V. All rights reserved.

Monitoring urbanization and its implications in a mega city from space: spatiotemporal patterns and its indicators.

PubMed

Ramachandra, T V; Bharath, A H; Sowmyashree, M V

2015-01-15

Rapid and invasive urbanization has been associated with depletion of natural resources (vegetation and water resources), which in turn deteriorates the landscape structure and conditions in the local environment. Rapid increase in population due to the migration from rural areas is one of the critical issues of the urban growth. Urbanisation in India is drastically changing the land cover and often resulting in the sprawl. The sprawl regions often lack basic amenities such as treated water supply, sanitation, etc. This necessitates regular monitoring and understanding of the rate of urban development in order to ensure the sustenance of natural resources .Urban sprawl is the extent of urbanization which leads to the development of urban forms with the destruction of ecology and natural landforms. The rate of change of land use and extent of urban sprawl can be efficiently visualized and modelled with the help of geoinformatics. The knowledge of urban area, especially the growth magnitude, shape geometry, and spatial pattern is essential to understand the growth and characteristics of urbanization process. Urban pattern, shape and growth can be quantified using spatial metrics. This communication quantifies the urbanisation and associated growth pattern in Delhi. Spatial data of four decades were analysed to understand land over and land use dynamics. Further the region was divided into 4 zones and into circles of 1 km incrementing radius to understand and quantify the local spatial changes. Results of the landscape metrics indicate that the urban center was highly aggregated and the outskirts and the buffer regions were in the verge of aggregating urban patches. Shannon's Entropy index clearly depicted the outgrowth of sprawl areas in different zones of Delhi. Copyright © 2014 Elsevier Ltd. All rights reserved.

Prevalence, awareness and control of diabetes in the Seychelles and relationship with excess body weight.

PubMed

Faeh, David; William, Julita; Tappy, Luc; Ravussin, Eric; Bovet, Pascal

2007-07-19

The evidence for a "diabesity" epidemic is accumulating worldwide but population-based data are still scarce in the African region. We assessed the prevalence, awareness and control of diabetes (DM) in the Seychelles, a rapidly developing country in the African region. We also examined the relationship between body mass index, fasting serum insulin and DM. Examination survey in a sample representative of the entire population aged 25-64 of the Seychelles, attended by 1255 persons (participation rate of 80.2%). An oral glucose tolerance test (OGTT) was performed in individuals with fasting blood glucose between 5.6 and 6.9 mmol/l. Diabetes mellitus (DM), impaired fasting glucose (IFG) and impaired glucose tolerance (IGT) were defined along criteria of the ADA. Prevalence estimates were standardized for age. The prevalence of DM was 11.5% and 54% of persons with DM were aware of having DM. Less than a quarter of all diabetic persons under treatment were well controlled for glycemia (HbA1c), blood pressure or LDL-cholesterol. The prevalence of IGT and IFG were respectively 10.4% and 24.2%. The prevalence of excess weight (BMI > or = 25 kg/m2) and obesity (BMI > or = 30 kg/m2) was respectively 60.1% and 25.0%. Half of all DM cases in the population could be attributed to excess weight. We found a high prevalence of DM and pre-diabetes in a rapidly developing country in the African region. The strong association between overweight and DM emphasizes the importance of weight control measures to reduce the incidence of DM in the population. High rates of diabetic persons not aware of having DM in the population and insufficient cardiometabolic control among persons treated for DM stress the need for intensifying health care for diabetes.

Thermal and pressure histories of the Malay Basin, offshore Malaysia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yusoff, W.I.; Swarbrick, R.E.

1994-07-01

The Malay Basin is a Neogene intracratonic basin characterized by high heat flow and rapid sedimentation; moderate to high overpressure is common in deeper reservoirs. Thermal conductivity and temperature data from 55 wells have been used to reassess the areal and vertical heat-flow distribution within the basin. Anomalously high temperatures have been observed in some sandstone intervals above the overpressured reservoir section. A narrow to rather abrupt pressure transition zone could be recognized. All hydrocarbon-filled reservoirs seemed to be associated with high heat flow (i.e., about 90 mW/m[sup 2]). Overpressure in some wells is approaching critical fracture pressure (i.e., 0.85more » psi/ft. pressure gradient) in the region. In the central part of the basin, the overpressured sections are found within the shallower (<2000 m) hydrocarbon-bearing units. Selective studies of the temporal development of the pore pressure indicated that overpressure development is associated with episodes of rapid sedimentation. A preliminary fluid flow model supported by pressure modeling is proposed whereby hot fluids are currently being expelled from deeper overpressured sandstone and mudrocks through a fractured seal induced by overpressure. The latter is caused by relatively rapid burial since late Tertiary times. Hydrocarbon migration may have been aided by this fluid movement.« less

Spatial and temporal dynamics of agricultural residue resources in the last 30 years in China.

PubMed

Yang, Yanli; Zhang, Peidong; Yang, Xutong; Xu, Xiaoning

2016-12-01

The availability and distribution of biomass resources are important for the development of the bioenergy industry in a region. Biomass resources are abundant in China; however, the raw material is severely deficient, which makes the Chinese bioenergy industry an embarrassment and a contradiction. Unclear reserves and distribution and changing trends of biomass resources are the reason for this situation. A collection coefficient model of Chinese agricultural residue resources was established and the spatial and temporal pattern dynamics of agricultural residue resources in the last 30 years were analyzed. The results show that agricultural residue resources increased in stages from 1978 to 2011, including a rapid increase from 1978 to 1999, a significant fall from 2000 to 2004, and a slow increase from 2004 to 2011. Crops straw and livestock manure are the main ingredients of agricultural residue resources with proportions of 53-59% and 31-38%, respectively. However, the former has gradually decreased, while the latter is increasing. This mainly resulted from the strategic reorganization of the Chinese agriculture structure and the rapid development of large-scale livestock breeding and agricultural mechanization. Large regional differences existed in Chinese agricultural residue resources, and three distribution types formed, including resource-rich areas in North China, Northeast and Inner Mongolia, resource-limited areas in Central and Southwest China, and resource-poor areas along Northwest and Southeast coasts. This pattern is a reverse of the distributions of climatic conditions, water resources, economic development, human resources, and technological levels. Finally, it can be predicted that livestock manure and biomass conversion technology at low temperature will play increasingly significant roles in bioenergy industry development. © The Author(s) 2016.

Lung cancer epidemiology: contemporary and future challenges worldwide.

PubMed

Didkowska, Joanna; Wojciechowska, Urszula; Mańczuk, Marta; Łobaszewski, Jakub

2016-04-01

Over the last century, lung cancer from the rarest of diseases became the biggest cancer killer of men worldwide and in some parts of the world also of women (North America, East Asia, Northern Europe, Australia and New Zealand). In 2012 over 1.6 million of people died due to lung cancer. The cause-effect relationship between tobacco smoking and lung cancer occurrence has been proven in many studies, both ecological and clinical. In global perspective one can see the increasing tobacco consumption trend followed by ascending trends of lung cancer mortality, especially in developing countries. In some more developed countries, where the tobacco epidemics was on the rise since the beginning of the 20th century and peaked in its mid, in male population lung cancer incidence trend reversed or leveled off. Despite predicted further decline of incidence rates, the absolute number of deaths will continue to grow in these countries. In the remaining parts of the world the tobacco epidemics is still evolving what brings rapid increase of the number of new lung cancer cases and deaths. Number of lung cancer deaths worldwide is expected to grow up to 3 million until 2035. The figures will double both in men (from 1.1 million in 2012 to 2.1 million in 2035) and women (from 0.5 million in 2012 to 0.9 million in 2035) and the two-fold difference between sexes will persist. The most rapid increase is expected in Africa region (AFRO) and East Mediterranean region (EMRO). The increase of the absolute number of lung cancer deaths in more developed countries is caused mostly by population aging and in less developed countries predominantly by the evolving tobacco epidemic.

A nested-PCR strategy for molecular diagnosis of mollicutes in uncultured biological samples from cows with vulvovaginitis.

PubMed

Voltarelli, Daniele Cristina; de Alcântara, Brígida Kussumoto; Lunardi, Michele; Alfieri, Alice Fernandes; de Arruda Leme, Raquel; Alfieri, Amauri Alcindo

2018-01-01

Bacteria classified in Mycoplasma (M. bovis and M. bovigenitalium) and Ureaplasma (U. diversum) genera are associated with granular vulvovaginitis that affect heifers and cows at reproductive age. The traditional means for detection and speciation of mollicutes from clinical samples have been culture and serology. However, challenges experienced with these laboratory methods have hampered assessment of their impact in pathogenesis and epidemiology in cattle worldwide. The aim of this study was to develop a PCR strategy to detect and primarily discriminate between the main species of mollicutes associated with reproductive disorders of cattle in uncultured clinical samples. In order to amplify the 16S-23S rRNA internal transcribed spacer region of the genome, a consensual and species-specific nested-PCR assay was developed to identify and discriminate between main species of mollicutes. In addition, 31 vaginal swab samples from dairy and beef affected cows were investigated. This nested-PCR strategy was successfully employed in the diagnosis of single and mixed mollicute infections of diseased cows from cattle herds from Brazil. The developed system enabled the rapid and unambiguous identification of the main mollicute species known to be associated with this cattle reproductive disorder through differential amplification of partial fragments of the ITS region of mollicute genomes. The development of rapid and sensitive tools for mollicute detection and discrimination without the need for previous cultures or sequencing of PCR products is a high priority for accurate diagnosis in animal health. Therefore, the PCR strategy described herein may be helpful for diagnosis of this class of bacteria in genital swabs submitted to veterinary diagnostic laboratories, not demanding expertise in mycoplasma culture and identification. Copyright © 2017 Elsevier B.V. All rights reserved.

Analysis of Rapid Multi-Focal Zone ARFI Imaging

PubMed Central

Rosenzweig, Stephen; Palmeri, Mark; Nightingale, Kathryn

2015-01-01

Acoustic radiation force impulse (ARFI) imaging has shown promise for visualizing structure and pathology within multiple organs; however, because the contrast depends on the push beam excitation width, image quality suffers outside of the region of excitation. Multi-focal zone ARFI imaging has previously been used to extend the region of excitation (ROE), but the increased acquisition duration and acoustic exposure have limited its utility. Supersonic shear wave imaging has previously demonstrated that through technological improvements in ultrasound scanners and power supplies, it is possible to rapidly push at multiple locations prior to tracking displacements, facilitating extended depth of field shear wave sources. Similarly, ARFI imaging can utilize these same radiation force excitations to achieve tight pushing beams with a large depth of field. Finite element method simulations and experimental data are presented demonstrating that single- and rapid multi-focal zone ARFI have comparable image quality (less than 20% loss in contrast), but the multi-focal zone approach has an extended axial region of excitation. Additionally, as compared to single push sequences, the rapid multi-focal zone acquisitions improve the contrast to noise ratio by up to 40% in an example 4 mm diameter lesion. PMID:25643078

Theory of hard diffraction and rapidity gaps

DOE Office of Scientific and Technical Information (OSTI.GOV)

Del Duca, V.

1996-02-01

In this talk we review the models describing the hard diffractive production of jets or more generally high-mass states in presence of rapidity gaps in hadron-hadron and lepton-hadron collisions. By rapidity gaps we mean regions on the lego plot in (pseudo)-rapidity and azimuthal angle where no hadrons are produced, between the jet(s) and an elastically scattered hadron (single hard diffraction) or between two jets (double hard diffraction). {copyright} {ital 1996 American Institute of Physics.}

Development of an electrochemical detection system for measuring DNA methylation levels using methyl CpG-binding protein and glucose dehydrogenase-fused zinc finger protein.

PubMed

Lee, Jinhee; Yoshida, Wataru; Abe, Koichi; Nakabayashi, Kazuhiko; Wakeda, Hironobu; Hata, Kenichiro; Marquette, Christophe A; Blum, Loïc J; Sode, Koji; Ikebukuro, Kazunori

2017-07-15

DNA methylation level at a certain gene region is considered as a new type of biomarker for diagnosis and its miniaturized and rapid detection system is required for diagnosis. Here we have developed a simple electrochemical detection system for DNA methylation using methyl CpG-binding domain (MBD) and a glucose dehydrogenase (GDH)-fused zinc finger protein. This analytical system consists of three steps: (1) methylated DNA collection by MBD, (2) PCR amplification of a target genomic region among collected methylated DNA, and (3) electrochemical detection of the PCR products using a GDH-fused zinc finger protein. With this system, we have successfully measured the methylation levels at the promoter region of the androgen receptor gene in 10 6 copies of genomic DNA extracted from PC3 and TSU-PR1 cancer cell lines. Since no sequence analysis or enzymatic digestion is required for this detection system, DNA methylation levels can be measured within 3h with a simple procedure. Copyright © 2016 Elsevier B.V. All rights reserved.

Evidence of Aerosols as a Media for Rapid Daytime HONO Production over China

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu, Zhen; Wang, Yuhang; Costabile, Francesa

Current knowledge of daytime HONO sources remains incomplete. A large missing daytime HONO source has been found in many places around the world, including polluted regions in China. Conventional understanding and recent studies attributed this missing source mainly to ground surface processes or gas-phase chemistry, while assuming aerosols to be an insignificant media for HONO production. We analyze in situ observations of HONO and its precursors at an urban site in Beijing, China, and report an apparent dependence of the missing HONO source strength on aerosol surface area and solar ultraviolet radiation. Based on extensive correlation analysis and process-modeling, wemore » propose that the rapid daytime HONO production in Beijing can be explained by enhanced hydrolytic disproportionation of NO2 on aqueous aerosol surfaces due to catalysis by dicarboxylic acid anions. The combination of high abundance of NO2, aromatic hydrocarbons, and aerosols over broad regions in China likely leads to elevated HONO levels, rapid OH production, and enhanced oxidizing capacity on a regional basis. Our findings call for attention to aerosols as a media for daytime heterogeneous HONO production in polluted regions like Beijing. This study also highlights the complex and uncertain heterogeneous chemistry in China, which merits future efforts of reconciling regional modeling and laboratory experiments, in order to understand and mitigate the regional particulate and O3 pollutions over China.« less

Development and evaluation of loop-mediated isothermal amplification assay for detection of Crimean Congo hemorrhagic fever virus in Sudan.

PubMed

Osman, Hana A M; Eltom, Kamal H; Musa, Nasreen O; Bilal, Nasreldin M; Elbashir, Mustafa I; Aradaib, Imadeldin E

2013-06-01

Crimean-Congo hemorrhagic fever (CCHF) virus (CCHFV) activity has been detected in Kordufan region of the Sudan in 2008 with high case-fatality rates in villages and rural hospitals in the region. Therefore, in the present study, a reverse transcription (RT) loop-mediated isothermal amplification (RT-LAMP) assay was developed and compared to nested RT-PCR for rapid detection of CCHFV targeting the small (S) RNA segment. A set of RT-LAMP primers, designed from a highly conserved region of the S segment of the viral genome, was employed to identify all the Sudanese CCHFV strains. The sensitivity studies indicated that the RT-LAMP detected 10fg of CCHFV RNA as determined by naked eye turbidity read out, which is more likely the way it would be read in a resource-poor setting. This level of sensitivity is good enough to detect most acute cases. Using agarose gel electrophoresis, the RT-LAMP assay detected as little as 0.1fg of viral RNA (equivalent to 50 viral particle). There was 100% agreement between results of the RT-LAMP and the nested PCR when testing 10-fold serial dilution of CCHFV RNA. The specificity studies indicated that there was no cross-reactivity with other related hemorrhagic fever viruses circulating in Sudan including, Rift Valley fever virus (RVFV), Dengue fever virus, and yellow fever virus. The RT-LAMP was performed under isothermal conditions at 63°C and no special apparatus was needed, which rendered the assay more economical and practical than real-time PCR in such developing countries, like Sudan. In addition, the RT-LAMP provides a valuable tool for rapid detection and differentiation of CCHFV during an outbreak of the disease in remote areas and in rural hospitals with resource-poor settings. Copyright © 2013 Elsevier B.V. All rights reserved.

Rapid-scan EPR imaging.

PubMed

Eaton, Sandra S; Shi, Yilin; Woodcock, Lukas; Buchanan, Laura A; McPeak, Joseph; Quine, Richard W; Rinard, George A; Epel, Boris; Halpern, Howard J; Eaton, Gareth R

2017-07-01

In rapid-scan EPR the magnetic field or frequency is repeatedly scanned through the spectrum at rates that are much faster than in conventional continuous wave EPR. The signal is directly-detected with a mixer at the source frequency. Rapid-scan EPR is particularly advantageous when the scan rate through resonance is fast relative to electron spin relaxation rates. In such scans, there may be oscillations on the trailing edge of the spectrum. These oscillations can be removed by mathematical deconvolution to recover the slow-scan absorption spectrum. In cases of inhomogeneous broadening, the oscillations may interfere destructively to the extent that they are not visible. The deconvolution can be used even when it is not required, so spectra can be obtained in which some portions of the spectrum are in the rapid-scan regime and some are not. The technology developed for rapid-scan EPR can be applied generally so long as spectra are obtained in the linear response region. The detection of the full spectrum in each scan, the ability to use higher microwave power without saturation, and the noise filtering inherent in coherent averaging results in substantial improvement in signal-to-noise relative to conventional continuous wave spectroscopy, which is particularly advantageous for low-frequency EPR imaging. This overview describes the principles of rapid-scan EPR and the hardware used to generate the spectra. Examples are provided of its application to imaging of nitroxide radicals, diradicals, and spin-trapped radicals at a Larmor frequency of ca. 250MHz. Copyright © 2017 Elsevier Inc. All rights reserved.

Peatland hydrogeological function at the regional scale

NASA Astrophysics Data System (ADS)

Larocque, M.; Avard, K.; Pellerin, S.

2012-12-01

Peatlands are important components of northern landscapes. In the Canadian province of Quebec, peatlands of the St. Lawrence Valley are rapidly disappearing, threatened by rapidly growing pressures from development. Peatlands are to varying extents groundwater dependent and as such are likely to respond drastically to changes in groundwater flow conditions and to contribute to the maintenance of groundwater levels within a superficial aquifer. Yet, there is very little understanding of the hydrogeological function of peatlands at the regional scale. For this reason, they are often simply discarded in complex groundwater management decisions. The implications are not clearly understood but could lead to the disruption of ecologically important fluxes and to significant impacts for the maintenance of long term water reservoirs across the land. This study was initiated in the Centre-du-Quebec region of southern Quebec to quantify how the peatland landscape has evolved in the last decades and to understand the hydrogeological function of peatlands at the regional scale. The study area (2856 km2) is located in the St. Lawrence Lowlands. The last deglaciation has contributed to a complex stratigraphy of unconsolidated sediments and peatlands have developed at the foot of the Appalachians. A recent regional study of Quaternary deposits has shown that a majority of these peatlands are found on aeolian deposits or reworked till, while only a few are set on marine clay, littoral deposits or directly on the bedrock. The area occupied by peatlands was measured with aerial photographs dating from 1966 and 2010. In 2010, peatlands were found on 6.1 % of the territory. Of these peatlands, 10 485 ha were intact and 7 015 underwent limited perturbations (e.g. drainage ditch, forest roads). Between 1966 and 2010, nearly a quarter of the peatlands observed in 1966 underwent irreversible perturbations (e.g. agriculture, paved roads). The main cause of peatland disappearance was from cranberry crops which have been developing extremely rapidly in the study area. Nine peatlands from different parts of the study area were sampled to determine the nature of the underlying sediments. Results show that eight out of the nine studied peatlands are located on relatively permeable sand deposits and can therefore sustain hydrogeological exchanges with the surrounding aquifer. Darcy fluxes calculated from piezometric data for the nine peatlands show that five of them receive water from the superficial aquifer while four contribute water to it. Using Quaternary deposits data and a 3D hydrostratigraphic model, the proportion of peatlands receiving groundwater or contributing water to the aquifer was found to be similar at the regional scale. For the nine studied peatlands, aquifer-peatland fluxes represent between 6 and 11% of the total water input to the organic deposits. Results also show that exchanged aquifer-peatland fluxes increase with the size of the peatland, either towards the peatland or from the organic deposits to the aquifer. This study suggests that peatlands have a buffer function to keep relatively stable levels in a superficial unconsolidated aquifer. Maintaining a peatland coverage on the landscape could contribute to sustain groundwater resources.

Developing Coastal Adaptation to Climate Change in the New York City Infrastructure-Shed: Process, Approach, Tools, and Strategies

NASA Technical Reports Server (NTRS)

Rosenzweig, Cynthia; Solecki, William D.; Blake, Reginald; Bowman, Malcolm; Faris, Craig; Gornitz, Vivien; Horton, Radley; Jacob, Klaus; LeBlanc, Alice; Leichenko, Robin;

Total pressing Indonesian gas development, exports

DOE Office of Scientific and Technical Information (OSTI.GOV)

Not Available

1994-01-24

Total is on track to become Indonesia's leading gas exporter by the turn of the century. Total's aggressive development of its Mahakam Delta acreage in East Kalimantan is intended to keep pace with growing liquefied natural gas demand, mainly from Japan but also increasingly from South Korea and Taiwan. A frantic scramble is under way among natural gas suppliers in the Pacific Rim region, particularly those with current LNG export facilities, to accommodate projections of soaring natural gas demand in the region. Accordingly, Total's Indonesian gas production goal is the centerpiece of a larger strategy to become a major playermore » in the Far East Asia gas scene. Its goals also fall in line with Indonesia's. Facing flat or declining oil production while domestic oil demand continues to soar along with a rapidly growing economy, Indonesia is heeding some studies that project the country could become a net oil importer by the turn of the century. The paper describes Total's Far East strategy, the Mahakam acreage which it operates, the shift to gas development, added discoveries, future development, project spending levels, and LNG export capacity.« less

An analysis of soil moisture and vegetation conditions during a period of rapid subseasonal oscillations between drought and pluvials over Texas during 2015

NASA Astrophysics Data System (ADS)

Hunt, E. D.; Otkin, J.; Zhong, Y.

2017-12-01

Flash drought, characterized by the rapid onset of abnormally warm and dry weather conditions that leads to the rapid depletion of soil moisture and rapid deteriorations in vegetation health. Flash recovery, on the other hand, is characterized by a period(s) of intense precipitation where drought conditions are quickly eradicated and may be replaced by saturated soils and flooding. Both flash drought and flash recovery are closely tied to the rapid depletion or recharge of root zone soil moisture; therefore, soil moisture observations are very useful for monitoring their evolution. However, in-situ soil moisture observations tend to be concentrated over small regions and thus other methods are needed to provide a spatially continuous depiction of soil moisture conditions. One option is to use top soil moisture retrievals from the Soil Moisture Active Passive (SMAP) sensor. SMAP provides routine coverage of surface soil moisture (0-5 cm) over most of the globe, including the timespan (2015) and region of interest (Texas) that are the focus of our study. This region had an unusual sequence of flash recovery-flash drought-flash recovery during an six-month period during 2015 that provides a valuable case study of rapid transitions between extreme soil moisture conditions. During this project, SMAP soil moisture retrievals are being used in combination with in-situ soil moisture observations and assimilated into the Land Information System (LIS) to provide information about soil moisture content. LIS also provides greenness vegetation fraction data over large regions. The relationship between soil moisture and vegetation conditions and the response of the vegetation to the rapidly changing conditions are also assessed using the satellite thermal infrared based Evaporative Stress Index (ESI) that depicts anomalies in evapotranspiration, along with other vegetation datasets (leaf area index, greenness fraction) derived using MODIS observations. Preliminary results with the Noah land surface model (inside of LIS) shows that it broadly captured the soil moisture evolution during the 2015 sequence but tended to underestimate the magnitude of soil moisture anomalies. The ESI also showed negative anomalies during the drought. These and other results will be presented at the annual meeting.

TRDistiller: a rapid filter for enrichment of sequence datasets with proteins containing tandem repeats.

PubMed

Richard, François D; Kajava, Andrey V

2014-06-01

The dramatic growth of sequencing data evokes an urgent need to improve bioinformatics tools for large-scale proteome analysis. Over the last two decades, the foremost efforts of computer scientists were devoted to proteins with aperiodic sequences having globular 3D structures. However, a large portion of proteins contain periodic sequences representing arrays of repeats that are directly adjacent to each other (so called tandem repeats or TRs). These proteins frequently fold into elongated fibrous structures carrying different fundamental functions. Algorithms specific to the analysis of these regions are urgently required since the conventional approaches developed for globular domains have had limited success when applied to the TR regions. The protein TRs are frequently not perfect, containing a number of mutations, and some of them cannot be easily identified. To detect such "hidden" repeats several algorithms have been developed. However, the most sensitive among them are time-consuming and, therefore, inappropriate for large scale proteome analysis. To speed up the TR detection we developed a rapid filter that is based on the comparison of composition and order of short strings in the adjacent sequence motifs. Tests show that our filter discards up to 22.5% of proteins which are known to be without TRs while keeping almost all (99.2%) TR-containing sequences. Thus, we are able to decrease the size of the initial sequence dataset enriching it with TR-containing proteins which allows a faster subsequent TR detection by other methods. The program is available upon request. Copyright © 2014 Elsevier Inc. All rights reserved.

A Conceptual Model for Tropical Cyclone Formation

NASA Astrophysics Data System (ADS)

Wang, Z.

2014-12-01

The role of cumulus congestus (shallow and congestus convection) in tropical cyclone (TC) formation is examined in a high-resolution simulation of Tropical Cyclone Fay (2008). It is found that cumulus congestus plays a dominant role in moistening the lower to middle troposphere and spinning up the near-surface circulation before genesis, while deep convection plays a key role in moistening the upper troposphere and intensifying the cyclonic circulation over a deep layer. The transition from the tropical wave stage to the TC stage is marked by a substantial increase in net condensation and potential vorticity generation by deep convection in the inner wave pouch region. This study suggests that TC formation can be regarded as a two-stage process. The first stage is a gradual process of moisture preconditioning and the low-level spinup, in which cumulus congestus plays a dominant role. The second stage commences with the rapid development of deep convection in the inner pouch region after the air column is moistened sufficiently, whereupon the concentrated convective heating near the pouch center strengthens the transverse circulation and leads to the amplification of the cyclonic circulation over a deep layer. The rapid development of deep convection can be explained by the power-law increase of precipitation rate with column water vapor (CWV) above a critical value. The high CWV near the pouch center thus plays an important role in convective organization. It is also shown that cumulus congestus can effectively drive the low-level convergence and provides a direct and simple pathway for the development of the TC proto-vortex near the surface.

Dynamic patterns of cortical expansion during folding of the preterm human brain.

PubMed

Garcia, Kara E; Robinson, Emma C; Alexopoulos, Dimitrios; Dierker, Donna L; Glasser, Matthew F; Coalson, Timothy S; Ortinau, Cynthia M; Rueckert, Daniel; Taber, Larry A; Van Essen, David C; Rogers, Cynthia E; Smyser, Christopher D; Bayly, Philip V

2018-03-20

During the third trimester of human brain development, the cerebral cortex undergoes dramatic surface expansion and folding. Physical models suggest that relatively rapid growth of the cortical gray matter helps drive this folding, and structural data suggest that growth may vary in both space (by region on the cortical surface) and time. In this study, we propose a unique method to estimate local growth from sequential cortical reconstructions. Using anatomically constrained multimodal surface matching (aMSM), we obtain accurate, physically guided point correspondence between younger and older cortical reconstructions of the same individual. From each pair of surfaces, we calculate continuous, smooth maps of cortical expansion with unprecedented precision. By considering 30 preterm infants scanned two to four times during the period of rapid cortical expansion (28-38 wk postmenstrual age), we observe significant regional differences in growth across the cortical surface that are consistent with the emergence of new folds. Furthermore, these growth patterns shift over the course of development, with noninjured subjects following a highly consistent trajectory. This information provides a detailed picture of dynamic changes in cortical growth, connecting what is known about patterns of development at the microscopic (cellular) and macroscopic (folding) scales. Since our method provides specific growth maps for individual brains, we are also able to detect alterations due to injury. This fully automated surface analysis, based on tools freely available to the brain-mapping community, may also serve as a useful approach for future studies of abnormal growth due to genetic disorders, injury, or other environmental variables.

Development of molecular methods for the rapid detection of antibiotic susceptibility of Mycoplasma bovis.

PubMed

Sulyok, Kinga M; Bekő, Katinka; Kreizinger, Zsuzsa; Wehmann, Enikő; Jerzsele, Ákos; Rónai, Zsuzsanna; Turcsányi, Ibolya; Makrai, László; Szeredi, Levente; Jánosi, Szilárd; Nagy, Sára Ágnes; Gyuranecz, Miklós

2018-01-01

Determining the antibiotic susceptibility profile of Mycoplasma bovis isolates in vitro provides the basis for the appropriate choice of antibiotics in the therapy. Traditionally, the antibiotic susceptibility examination of mycoplasmas is technically demanding, time-consuming and rarely performed in diagnostic laboratories. The aim of the present study was to develop rapid molecular assays to determine mutations responsible for elevated minimal inhibitory concentrations (MICs) to fluoroquinolones, tetracyclines, aminocyclitols, macrolides, lincosamides, phenicols and pleuromutilins in M. bovis. The nine mismatch amplification mutation assays (MAMA) and seven high resolution melt (HRM) tests designed in the present study enable the simultaneous detection of these genetic markers. The sensitivity of the assays varied between 10 2 -10 5 copy numbers/reaction. Cross-reactions with other mycoplasmas occurring in cattle were detected in assays targeting universal regions (e.g. 16S rRNA). Nevertheless, results of the novel method were in accordance with sequence and MICs data of the M. bovis pure cultures. Also, the tests of clinical samples containing high amount of M. bovis DNA were congruent even in the presence of other Mycoplasma spp. The presented method is highly cost-effective and can provide an antibiogram to 12 antibiotics in approximately 3-4 days when previous isolation of M. bovis is applied. In order to assure the proper identification of the genetic markers at issue, the regions examined by the MAMA and HRM tests are overlapping. In conclusion, the developed assays have potential to be used in routine diagnostics for the detection of antibiotic susceptibility in M. bovis. Copyright © 2017 Elsevier B.V. All rights reserved.

Bremsstrahlung from colour charges as a source of soft particle production in hadronic collisions

NASA Astrophysics Data System (ADS)

Bialas, A.; Jezabek, M.

2004-06-01

It is proposed that soft particle production in hadronic collisions is dominated by multiple gluon exchanges between partons from the colliding hadrons, followed by radiation of hadronic clusters from the coloured partons distributed uniformly in rapidity. This explains naturally two dominant features of the data: (a) the linear increase of rapidity spectra in the regions of limiting fragmentation and, (b) the proportionality between the increasing width of the limiting fragmentation region and the height of the central plateau.

Rapid transport of CCL11 across the blood-brain barrier: regional variation and importance of blood cells.

PubMed

Erickson, Michelle A; Morofuji, Yoichi; Owen, Joshua B; Banks, William A

2014-06-01

Increased blood levels of the eotaxin chemokine C-C motif ligand 11 (CCL11) in aging were recently shown to negatively regulate adult hippocampal neurogenesis. How circulating CCL11 could affect the central nervous system (CNS) is not clear, but one possibility is that it can cross the blood-brain barrier (BBB). Here, we show that CCL11 undergoes bidirectional transport across the BBB. Transport of CCL11 from blood into whole brain (influx) showed biphasic kinetics, with a slow phase preceding a rapid phase of uptake. We found that the slow phase was explained by binding of CCL11 to cellular components in blood, whereas the rapid uptake phase was mediated by direct interactions with the BBB. CCL11, even at high doses, did not cause BBB disruption. All brain regions except striatum showed a delayed rapid-uptake phase. Striatum had only an early rapid-uptake phase, which was the fastest of any brain region. We also observed a slow but saturable transport system for CCL11 from brain to blood. C-C motif ligand 3 (CCR3), an important receptor for CCL11, did not facilitate CCL11 transport across the BBB, although high concentrations of a CCR3 inhibitor increased brain uptake without causing BBB disruption. Our results indicate that CCL11 in the circulation can access many regions of the brain outside of the neurogenic niche via transport across the BBB. This suggests that blood-borne CCL11 may have important physiologic functions in the CNS and implicates the BBB as an important regulator of physiologic versus pathologic effects of this chemokine.

Rapid Transport of CCL11 across the Blood-Brain Barrier: Regional Variation and Importance of Blood Cells

PubMed Central

Erickson, Michelle A.; Morofuji, Yoichi; Owen, Joshua B.

2014-01-01

Increased blood levels of the eotaxin chemokine C-C motif ligand 11 (CCL11) in aging were recently shown to negatively regulate adult hippocampal neurogenesis. How circulating CCL11 could affect the central nervous system (CNS) is not clear, but one possibility is that it can cross the blood-brain barrier (BBB). Here, we show that CCL11 undergoes bidirectional transport across the BBB. Transport of CCL11 from blood into whole brain (influx) showed biphasic kinetics, with a slow phase preceding a rapid phase of uptake. We found that the slow phase was explained by binding of CCL11 to cellular components in blood, whereas the rapid uptake phase was mediated by direct interactions with the BBB. CCL11, even at high doses, did not cause BBB disruption. All brain regions except striatum showed a delayed rapid-uptake phase. Striatum had only an early rapid-uptake phase, which was the fastest of any brain region. We also observed a slow but saturable transport system for CCL11 from brain to blood. C-C motif ligand 3 (CCR3), an important receptor for CCL11, did not facilitate CCL11 transport across the BBB, although high concentrations of a CCR3 inhibitor increased brain uptake without causing BBB disruption. Our results indicate that CCL11 in the circulation can access many regions of the brain outside of the neurogenic niche via transport across the BBB. This suggests that blood-borne CCL11 may have important physiologic functions in the CNS and implicates the BBB as an important regulator of physiologic versus pathologic effects of this chemokine. PMID:24706984

Water footprint characteristic of less developed water-rich regions: Case of Yunnan, China.

PubMed

Qian, Yiying; Dong, Huijuan; Geng, Yong; Zhong, Shaozhuo; Tian, Xu; Yu, Yanhong; Chen, Yihui; Moss, Dana Avery

2018-03-30

Rapid industrialization and urbanization pose pressure on water resources in China. Virtual water trade proves to be an increasingly useful tool in water stress alleviation for water-scarce regions, while bringing opportunities and challenges for less developed water-rich regions. In this study, Yunnan, a typical province in southwest China, was selected as the case study area to explore its potential in socio-economic development in the context of water sustainability. Both input-output analysis and structural decomposition analysis on Yunnan's water footprint for the period of 2002-2012 were performed at not only an aggregated level but also a sectoral level. Results show that although the virtual water content of all economic sectors decreased due to technological progress, Yunnan's total water footprint still increased as a result of economic scale expansion. From the sectoral perspective, sectors with large water footprints include construction sector, agriculture sector, food manufacturing & processing sector, and service sector, while metal products sector and food manufacturing & processing sector were the major virtual water exporters, and textile & clothing sector and construction sector were the major importers. Based on local conditions, policy suggestions were proposed, including economic structure and efficiency optimization, technology promotion and appropriate virtual water trade scheme. This study provides valuable insights for regions facing "resource curse" by exploring potential socio-economic progress while ensuring water security. Copyright © 2018 Elsevier Ltd. All rights reserved.

On the Role of Hyper-arid Regions within the Virtual Water Trade Network

NASA Astrophysics Data System (ADS)

Aggrey, James; Alshamsi, Aamena; Molini, Annalisa

2016-04-01

Climate change, economic development, and population growth are bound to increasingly impact global water resources, posing a significant threat to the sustainable development of arid regions, where water consumption highly exceeds the natural carrying capacity, population growth rate is high, and climate variability is going to impact both water consumption and availability. Virtual Water Trade (VWT) - i.e. the international trade network of water-intensive products - has been proposed as a possible solution to optimize the allocation of water resources on the global scale. By increasing food availability and lowering food prices it may in fact help the rapid development of water-scarce regions. The structure of the VWT network has been analyzed by a number of authors both in connection with trade policies, socioeconomic constrains and agricultural efficiency. However a systematic analysis of the structure and the dynamics of the VWT network conditional to aridity, climatic forcing and energy availability, is still missing. Our goal is hence to analyze the role of arid and hyper-arid regions within the VWN under diverse climatic, demographic, and energy constraints with an aim to contribute to the ongoing Energy-Water-Food nexus discussion. In particular, we focus on the hyper-arid lands of the Arabian Peninsula, the role they play in the global network and the assessment of their specific criticalities, as reflected in the VWN resilience.

Tropical Peat and Peatland Development in the Floodplains of the Greater Pamba Basin, South-Western India during the Holocene

PubMed Central

Padmalal, Damodaran; Limaye, Ruta B.; S., Vishnu Mohan; Jennerjahn, Tim; Gamre, Pradeep G.

2016-01-01

Holocene sequences in the humid tropical region of Kerala, South-western (SW) India have preserved abundance of organic—rich sediments in the form of peat and its rapid development in a narrow time frame towards Middle Holocene has been found to be significant. The sub—coastal areas and flood plains of the Greater Pamba Basin have provided palaeorecords of peat indicating that the deposits are essentially formed within freshwater. The combination of factors like stabilized sea level and its subsequent fall since the Middle Holocene, topographic relief and climatic conditions led to rapid peat accumulation across the coastal lowlands. The high rainfall and massive floods coupled with a rising sea level must have inundated > 75% of the coastal plain land converting it into a veritable lagoon—lake system that eventually led to abrupt termination of the forest ecosystem and also converted the floodplains into peatland where accumulation of peat almost to 2.0–3.0 m thickness in coastal lowlands and river basins during the shorter interval in the Middle Holocene. Vast areas of the coastal plains of Kerala have been converted into carbon rich peatland during the Middle Holocene and transforming the entire coastal stretch and associated landforms as one of the relatively youngest peatlands in the extreme southern tip of India. Unlike the uninterrupted formation of peatlands of considerable extent during the Holocene in Southeast Asia, the south Peninsular Indian region has restricted and short intervals of peatlands in the floodplains and coastal lowlands. Such a scenario is attributed to the topographic relief of the terrain and the prevailing hydrological regimes and environmental conditions as a consequence of monsoon variability since Middle Holocene in SW India. Considering the tropical coastal lowlands and associated peatlands are excellent repositories of carbon, they are very important for regional carbon cycling and habitat diversity. The alarming rate of land modification and development is destabilizing these carbon pools resulting in large scale carbon emissions to the atmosphere and loss of low-latitude peat palaeorecords. Therefore, these palaeorecords are to be conserved and addressed for better understanding and utilizing the carbon pool for effective climate change adaptation. This communication is the first attempt of addressing the peat formation and peatland development during the Holocene from the tropical region of Peninsular India. PMID:27163658

Tropical Peat and Peatland Development in the Floodplains of the Greater Pamba Basin, South-Western India during the Holocene.

PubMed

Kumaran, Navnith K P; Padmalal, Damodaran; Limaye, Ruta B; S, Vishnu Mohan; Jennerjahn, Tim; Gamre, Pradeep G

2016-01-01

Holocene sequences in the humid tropical region of Kerala, South-western (SW) India have preserved abundance of organic-rich sediments in the form of peat and its rapid development in a narrow time frame towards Middle Holocene has been found to be significant. The sub-coastal areas and flood plains of the Greater Pamba Basin have provided palaeorecords of peat indicating that the deposits are essentially formed within freshwater. The combination of factors like stabilized sea level and its subsequent fall since the Middle Holocene, topographic relief and climatic conditions led to rapid peat accumulation across the coastal lowlands. The high rainfall and massive floods coupled with a rising sea level must have inundated > 75% of the coastal plain land converting it into a veritable lagoon-lake system that eventually led to abrupt termination of the forest ecosystem and also converted the floodplains into peatland where accumulation of peat almost to 2.0-3.0 m thickness in coastal lowlands and river basins during the shorter interval in the Middle Holocene. Vast areas of the coastal plains of Kerala have been converted into carbon rich peatland during the Middle Holocene and transforming the entire coastal stretch and associated landforms as one of the relatively youngest peatlands in the extreme southern tip of India. Unlike the uninterrupted formation of peatlands of considerable extent during the Holocene in Southeast Asia, the south Peninsular Indian region has restricted and short intervals of peatlands in the floodplains and coastal lowlands. Such a scenario is attributed to the topographic relief of the terrain and the prevailing hydrological regimes and environmental conditions as a consequence of monsoon variability since Middle Holocene in SW India. Considering the tropical coastal lowlands and associated peatlands are excellent repositories of carbon, they are very important for regional carbon cycling and habitat diversity. The alarming rate of land modification and development is destabilizing these carbon pools resulting in large scale carbon emissions to the atmosphere and loss of low-latitude peat palaeorecords. Therefore, these palaeorecords are to be conserved and addressed for better understanding and utilizing the carbon pool for effective climate change adaptation. This communication is the first attempt of addressing the peat formation and peatland development during the Holocene from the tropical region of Peninsular India.

Probabilistic Impact Assessment of Domestic Rainwater Harvesting in Urban Slums: West Africa Case Study

NASA Astrophysics Data System (ADS)

Cowden, J. R.; Watkins, D. W.; Mihelcic, J. R.; Fry, L. M.

2007-12-01

Urban populations now exceed rural populations worldwide, creating unique challenges in providing basic services, especially in developing countries where informal or illegal settlements grow in peri-urban areas. West Africa is an acute example of the problems created by rapid urban growth, with high levels of urban poverty and low water and sanitation access rates. Although considerable effort has been made in providing improved water access and urban services to slum communities, research indicates that clean water access rates are not keeping up with urbanization rates in several areas of the world and that rapidly growing slum communities are beginning to overwhelm many prior water improvements projects. In the face of these challenges, domestic rainwater harvesting is proposed as a technologically appropriate and economically viable option for enhancing water supplies to urban slum households. However, assessing the reliability, potential health impacts, and overall cost-effectiveness of these systems on a regional level is difficult for several reasons. First, long daily rainfall records are not readily available in much of the developing world, including many regions of sub-Saharan Africa. Second, significant uncertainties exist in the relevant cost, water use, and health data. Third, to estimate the potential future impacts at the regional scale, various global change scenarios should be investigated. Finally, in addition to these technical challenges, there is also a need to develop relatively simple and transparent assessment methods for informing policy makers. A procedure is presented for assessment of domestic rainwater harvesting systems using a combination of scenario, sensitivity, and trade-off analyses. Using data from West Africa, simple stochastic weather models are developed to generate rainfall sequences for the region, which are then used to estimate the reliability of providing a range of per capita water supplies. Next, a procedure is proposed for quantifying the health impacts of improved water supplies, and sensitivity analysis of cost and health data provides an indication of cost- effectiveness. Climate change impacts are assessed via weather model parameter adjustment according to statistical downscaling of general circulation model output. Future work involving the interpolation of model parameters to ungaged sites, incorporation of additional global change scenarios (e.g., population, emissions), and extension of the procedure to a full Monte Carlo analysis will be discussed as time allows.

Characterization of transboundary POP contamination in aquatic ecosystems of Pearl River delta.

PubMed

Chau, K W

2005-01-01

During the past two decades, the rapid development of the Pearl River delta leads to substantial accumulation of various toxic organic compounds. This study aims to give a preliminary characterization of the existing state of contamination in this region and to provide insight into the possible fate of persistent organic pollutants (POPs) in this estuary. The available data on POPs in water, river, estuarine sediments, soil, and marine organisms within the Pearl River delta are compiled. It is shown that it may lead to transboundary POP pollution problems at both Hong Kong and Macau Special Administration Regions located at the downstream end of the region. It is noted that the levels of DDTs and HCHs in various environmental media are at alerting levels and that fresh DDT might still be applied illegally within the region. A systematic research is required to determine both the temporal and spatial variations of all POPs in various carrying media of the Pearl River delta as a whole.

The melting Himalayas: cascading effects of climate change on water, biodiversity, and livelihoods.

PubMed

Xu, Jianchu; Grumbine, R Edward; Shrestha, Arun; Eriksson, Mats; Yang, Xuefei; Wang, Yun; Wilkes, Andreas

2009-06-01

The Greater Himalayas hold the largest mass of ice outside polar regions and are the source of the 10 largest rivers in Asia. Rapid reduction in the volume of Himalayan glaciers due to climate change is occurring. The cascading effects of rising temperatures and loss of ice and snow in the region are affecting, for example, water availability (amounts, seasonality), biodiversity (endemic species, predator-prey relations), ecosystem boundary shifts (tree-line movements, high-elevation ecosystem changes), and global feedbacks (monsoonal shifts, loss of soil carbon). Climate change will also have environmental and social impacts that will likely increase uncertainty in water supplies and agricultural production for human populations across Asia. A common understanding of climate change needs to be developed through regional and local-scale research so that mitigation and adaptation strategies can be identified and implemented. The challenges brought about by climate change in the Greater Himalayas can only be addressed through increased regional collaboration in scientific research and policy making. ©2009 Society for Conservation Biology.

Regge vertex for quark production in the central rapidity region in the next-to-leading order

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kozlov, M. G., E-mail: M.G.Kozlov@inp.nsk.su; Reznichenko, A. V., E-mail: A.V.Reznichenko@inp.nsk.su

2016-03-15

The effective vertex for quark production in the interaction of a Reggeized quark and a Reggeized gluon is calculated in the next-to-leading order (NLO). The resulting vertex is the missing component of the NLO multi-Regge amplitude featuring quark and gluon exchanges in the t channels. This calculation will make it possible to develop in future the bootstrap approach to proving quark Reggeization in the next-to-leading logarithmic approximation.

Studies of Genetic Variation in the AIDS Virus: Relevance to Disease Pathogenesis Anti-Viral Therapy, and Vaccine Development

DTIC Science & Technology

1990-06-30

lentiviral systems including equine infectious anemia virus (EIAV), visna virus, and simian immunodeficiency virus (SIV) (119,120,154). For EIAV, it is clear...a pig-tailed macaque that possesses altered biologic and antigenic properties leading to a broader host-range and a rapid, fatal immunodeficiency ...envelope/LTR region of a replication-defective variant of feline leukemia virus (FeLV), when introduced into a replication competent construct of FeLV, was

Vacuolar H[sup +]-ATPase 69-kilodalton catalytic subunit cDNA from developing cotton (Gossypium hirsutum) ovules

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wilkins, T.A.

1993-06-01

This study investigates the molecular events of vacuole ontogeny in rapidly elongated cotton plant cells. Within the DNA coding region, the cotton and carrot cDNA clones exhibit 82.2% nucleotide sequence homology; at the amino acid level cotton and carrot catalytic subunits exhibited 95.7% identity and 2.1% amino acid similarity. When aligned with the analogous sequences from yeast, the cotton protein shared only 60.5% amino acid identity and 12.7% similarity. 10 refs., 1 tab.

Transportation as an Element of Foreign Policy in Southern Africa or the Ties that Bind

DTIC Science & Technology

1985-06-01

been used by political leaders in Southern Africa to push regional development in a direction that would benefit the particular personal or corporate ...concession to an American financed company which rapidly went bankrupt and sold out to an English owned company, owned by Cecil J. Rhodes. Claiming breach...8217 political cunning and his ability to secure financing , all in an effort to "extract maximum political advantage with minimum financial outlay." [Ref

Methyllycaconitine: a non-radiolabeled ligand for mapping α7 neuronal nicotinic acetylcholine receptors - in vivo target localization and biodistribution in rat brain.

PubMed

Nirogi, Ramakrishna; Kandikere, Vishwottam; Bhyrapuneni, Gopinadh; Saralaya, Ramanatha; Muddana, Nageswararao; Komarneni, Prashanth

2012-07-01

Reduction of cerebral cortical and hippocampal α7 neuronal nicotinic acetylcholine receptor (nAChR) density was observed in the Alzheimer's disease (AD) and other neurodegenerative diseases. Mapping the subtypes of nAChRs with selective ligand by viable, quick and consistent method in preclinical drug discovery may lead to rapid development of more effective therapeutic agents. The objective of this study was to evaluate the use of methyllycaconitine (MLA) in non-radiolabeled form for mapping α7 nAChRs in rat brain. MLA pharmacokinetic and brain penetration properties were assessed in male Wistar rats. The tracer properties of MLA were evaluated in rat brain by dose and time dependent differential regional distribution studies. Target specificity was validated after blocking with potent α7 nAChR agonists ABBF, PNU282987 and nicotine. High performance liquid chromatography combined with triple quad mass spectral detector (LC-MS/MS) was used to measure the plasma and brain tissue concentrations of MLA. MLA has shown rapid brain uptake followed by a 3-5 fold higher specific binding in regions containing the α7 nAChRs (hypothalamus - 1.60 ng/g), when compared to non-specific regions (striatum - 0.53 ng/g, hippocampus - 0.46 ng/g, midbrain - 0.37 ng/g, frontal cortex - 0.35 ng/g and cerebellum - 0.30 ng/g). Pretreatment with potent α7 nAChR agonists significantly blocked the MLA uptake in hypothalamus. The non-radiolabeled MLA binding to brain region was comparable with the α7 mRNA localization and receptor distribution reported for [(3)H] MLA in rat brain. The rat pharmacokinetic, brain penetration and differential brain regional distribution features favor that MLA is suitable to use in preclinical stage for mapping α7 nAChRs. Hence, this approach can be employed as an essential tool for quicker development of novel selective ligand to map variation in the α7 receptor densities, as well as to evaluate potential new chemical entities targeting neurodegenerative diseases. Copyright © 2012 Elsevier Inc. All rights reserved.

Enhancer scanning to locate regulatory regions in genomic loci

PubMed Central

Buckley, Melissa; Gjyshi, Anxhela; Mendoza-Fandiño, Gustavo; Baskin, Rebekah; Carvalho, Renato S.; Carvalho, Marcelo A.; Woods, Nicholas T.; Monteiro, Alvaro N.A.

2016-01-01

The present protocol provides a rapid, streamlined and scalable strategy to systematically scan genomic regions for the presence of transcriptional regulatory regions active in a specific cell type. It creates genomic tiles spanning a region of interest that are subsequently cloned by recombination into a luciferase reporter vector containing the Simian Virus 40 promoter. Tiling clones are transfected into specific cell types to test for the presence of transcriptional regulatory regions. The protocol includes testing of different SNP (single nucleotide polymorphism) alleles to determine their effect on regulatory activity. This procedure provides a systematic framework to identify candidate functional SNPs within a locus during functional analysis of genome-wide association studies. This protocol adapts and combines previous well-established molecular biology methods to provide a streamlined strategy, based on automated primer design and recombinational cloning to rapidly go from a genomic locus to a set of candidate functional SNPs in eight weeks. PMID:26658467

Investigating warming trends and spatial patterns of Land Surface Temperatures over the Greater Los Angeles Area using new MODIS and VIIRS LST products

NASA Astrophysics Data System (ADS)

Malakar, N. K.; Hulley, G. C.

2016-12-01

The Los Angeles (LA) metropolitan area is one of the fastest growing urban centers in the United States, and home to roughly 18 million people. Understanding the trends and impacts of warming temperatures in urban environments is an increasingly important issue in our changing climate. We used thermal infrared data from Moderate Resolution Imaging Spectroradiometer (MODIS), and Visible Infrared Imaging Radiometer Suite (VIIRS) sensors to retrieve Land Surface Temperature using a new Temperature Emissivity Separation algorithm adapted for these sensors. We analyzed day and night LST retrievals to study the warming trends of LST for the greater LA region from 2002-2015. The average warming trend over LA for summer days and nights over this period for MODIS Aqua data was 1.1 °C per decade, while a more rapid warming is observed for the years 2012-2016 for both MODIS and VIIRS observations. We have also found that inland LA regions are warming more rapidly than the other regions. We further investigate the underlying cause of the warming by looking into the physical factors such as changes in net radiation, cloud cover, and evapotranspiration. The results will help to understand how indicators of climate change are evolving in the beginning of the 21st century, and how they compare with global climate model projections. Identification of potential impacts, and underlying causes of warming trends in various LA regions will help decision makers to develop policies to help mitigate the effects of rising temperatures.

Acceleration of thaw slump activity in glaciated landscapes of the Western Canadian Arctic

NASA Astrophysics Data System (ADS)

Segal, Rebecca A.; Lantz, Trevor C.; Kokelj, Steven V.

2016-03-01

Climate change is increasing the frequency and intensity of thermokarst, but the influences of regional climate and physiography remain poorly understood. Retrogressive thaw slumping is one of the most dynamic forms of thermokarst and affects many areas of glaciated terrain across northwestern Canada. In this study, we used airphotos and satellite imagery to investigate the influence of climate and landscape factors on thaw slump dynamics. We assessed slump size, density, and growth rates in four regions of ice-rich terrain with contrasting climate and physiographic conditions: the Jesse Moraine, the Tuktoyaktuk Coastlands, the Bluenose Moraine, and the Peel Plateau. Observed increases in: (1) the area impacted by slumps (+2 to +407%), (2) average slump sizes (+0.31 to +1.82 ha), and (3) slump growth rates (+169 to +465 m2 yr-1) showed that thermokarst activity is rapidly accelerating in ice-rich morainal landscapes in the western Canadian Arctic, where slumping has become a dominant driver of geomorphic change. Differences in slump characteristics among regions indicate that slump development is strongly influenced by topography, ground ice conditions, and Quaternary history. Observed increases in slump activity occurred in conjunction with increases in air temperature and precipitation, but variation in slump activity among the four regions suggests that increased precipitation has been an important driver of change. Our observation that the most rapid intensification of slump activity occurred in the coldest environment (the Jesse Moraine on Banks Island) indicates that ice-cored landscapes in cold permafrost environments are highly vulnerable to climate change.

A Regional-Scale Groundwater Model Supporting Management of the Sian Ka'an Biosphere Reserve and its Catchment, Quintana Roo, Mexico

NASA Astrophysics Data System (ADS)

Neuman, B. R.; Merediz Alonso, G.; Rebolledo Vieyra, M.; Marin, L.; Supper, R.; Bauer-Gottwein, P.

2007-05-01

The Caribbean Coast of the Yucatan Peninsula is a rapidly developing area featuring a booming tourism industry. The number of hotel rooms in the Riviera Maya has increased from 2600 in 1996 to 26,000 in 2005, while the total population in the Mexican federal state of Quintana Roo has grown from 500,000 in 1990 to 1,115,000 in 2005. This explosive growth threatens the region's water resources, which primarily consist of a less than 50m thick freshwater lens residing in the regional karst aquifer underlying the entire Yucatan Peninsula. The Sian Ka'an Biosphere Reserve, a 6400 km2 combined marine/terrestrial nature protection area is situated south of Tulum (approx. 87.3° - 88° W, 19° - 20° N). The site is listed as a UNESCO world heritage site and is protected under the Ramsar Convention. It includes extensive freshwater wetlands, saline/brackish mangrove swamps, tropical rainforests and parts of the world's second largest coral reef. The freshwater supply to the system occurs primarily via subsurface inflow. Large freshwater springs emerge through vertical sinkholes (cenotes) in the lagoons of Sian Ka'an. Management of this unique ecosystem in view of the rapid development and urbanization of the surrounding areas requires detailed knowledge on the groundwater flow paths in and around the reserve. Moreover, mapping and delineation of its groundwater catchment zone and groundwater traveling time zones is essential. To this end, a regional-scale steady-state groundwater flow model of the Sian Ka'an Biosphere reserve and its catchment was developed. The model is implemented in MIKE SHE with a finite-difference cell size of 1 km2 and is driven with temporally averaged climate forcings. The karst aquifer is treated as an equivalent porous medium. Darcy's law is assumed to be valid over regional scales and the main structural elements of the karst aquifer are included in the model as zones of varying hydraulic conductivity. High conductivity zones in the Sian Ka'an catchment area were identified from existing geological maps and remote sensing data. Selected high conductivity zones were surveyed using geophysical techniques (EM-34, multi-electrode profiling) to confirm their existence on the ground. Modeled groundwater catchment zones and groundwater traveling times to Sian Ka'an were shown to sensitively depend on the location and parameterization of the high conductivity zones. In order to target groundwater and wetland protection efforts, regional-scale mapping of the aquifer structure using airborne geophysical techniques is recommended.

MARSite: Marmara as a Supersite

NASA Astrophysics Data System (ADS)

Meral Ozel, N.; Necmioglu, O.; Ergintav, S.; Ozel, A.; Erdik, M. O.

2013-12-01

The Marmara Region is one of the most active seismic regions in Turkey and also most densely populated and fast-developing part in the country. The region was effected with destructive earthquakes in its past, and the seismic hazard in Marmara Region has become a great concern especially after the Izmit and Duzce earthquakes in 1999 costing 18.000 people lives. Recent studies indicate that the region has a great potential to produce M≥7.0 earthquake within the next 30 years. Hence, a realistic assessment of the earthquake hazard in this area including Istanbul with more then 15 million inhabitants is a priority. MARsite project identifes the Marmara region as a ';Supersite' to aggregate on-shore, off-shore and space-based observations, comprehensive geophysical monitoring, improved hazard and risk assessments encompassed in an integrated set of activities. MARsite Consortium constitutes of 18 European research institutions with a long record of scientific history and success, and 3 SMEs, from 7 nations of the Euro-Mediterranean area. MARsite aims to harmonize geological, geophysical, geodetic and geochemical observations to provide a better view of the post-seismic deformation of the 1999 Izmit earthquake (in addition to the post-seismic signature of previous earthquakes), loading of submarine and inland active fault segments and transient pre-earthquake signals, related to stress loading with different tectonic properties in and around Marmara Sea. These studies are planned to contribute to high-quality rapid source-mechanism solutions and slip models, early warning and rapid-response studies. The project outputs will also be adapted to improve various phases of the risk management cycle with the creation of a link between the scientific community and end users. In this context, MARsite will develop novel geo-hazard monitoring instruments including high-resolution displacement meters, novel borehole instrumentation and sea-bottom gas emission and heat-flow measurement systems, in association with the relevant industrial sectors and SMEs. Data and the results of MARSite will be exploited through the integration of data management practices and coordination with ongoing research infrastructures. A dissemination and public outreach strategy will be further developed on the analysis of the target users and a communication plan will be produced to ensure effective dissemination. MARsite will represent a significant European contribution to the Supersite initiative and thus to the Global Earth Observation System (GEOSS), and it will lead to better scientific understanding of the geophysical processes, contributing in-situ data to a unifying e-infrastructure and reduce our vulnerability to geologic hazards.

Information Systems and Software Engineering Research and Education in Oulu until the 1990s

NASA Astrophysics Data System (ADS)

Oinas-Kukkonen, Henry; Kerola, Pentti; Oinas-Kukkonen, Harri; Similä, Jouni; Pulli, Petri

This paper discusses the internationalization of software business in the Oulu region. Despite its small size, the region grew rapidly and very successfully into a global information and communication technology business center. The University of Oulu, which was the northern most university in the world at the time of its establishment (1958) had a strong emphasis on engineering since its very beginning. Research on electronics was carried out since the early 1960s. Later, when the Department of Information Processing Science was founded in 1969, research on information systems and later also on software engineering was carried out. This paper discusses the role of the information systems and software engineering research for the business growth of the region. Special emphasis is put on understanding the role of system-theoretical and software development expertise for transferring research knowledge into practice.

Efficiency of Low-Profile External Dumping at Open Pit Coal Mining in Kemerovo Region

NASA Astrophysics Data System (ADS)

Selyukov, Alexey; Ermolaev, Vyacheslav; Kostinez, Irina

2017-11-01

Kemerovo region is one of the largest industrial regions of Russia, with a raw material specialization. The rapid growth of the coal industry in recent years has been greatly facilitated by the expansion and development of open pit mining for coal seams extraction, accompanied by an increase in the volumes of overburden and the height of the dumps. There are about 400 objects in the Russian Federation Government Register of Waste Disposal Facilities 80% of which are dumps. Approaches both to external dumping and to the technical stage of reclamation currently contribute to the growth of geomorphic system's instability. Thus, it is proposed to slightly change the approaches to external dumping: the essence consists in the formation of an external dump of overburden, which in future would represent a favorable landscape unit of a flat surface relief used for subsequent differently directed purposes.