Sample records for repeat hydrography program

  1. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kozyr, Alex

    This report presents methods, and analytical and quality control procedures for salinity, oxygen, nutrient, inorganic carbon, organic carbon, chlorofluorocarbon (CFC), and bomb carbon-14 system parameters performed during the A20_2003 and A22_2003 cruises, which took place between September 22 and November 13, 2003, aboard research vessel (R/V) Knorr under the auspices of the National Oceanic and Atmospheric Administration (NOAA) and National Science Foundation (NSF). The R/V Knorr departed Woods Hole, Massachusetts, on September 22 for the Repeat Section A20, and ended this line in Port of Spain, Trinidad, on October 20. The Repeat Section A22 started on October 23 in Portmore » of Spain, Trinidad, and finished on November 13, 2003, in Woods Hole, Massachusetts. The research conducted was one of a series of repeat hydrography sections jointly funded by NOAA and NSF as part of the Climate Variability Program (CLIVAR)/CO2/repeat hydrography/tracer program. Samples were taken from 36 depths at 88 stations on section A20 and 82 stations on section A22. The data presented in this report include the analyses of water samples for total inorganic carbon (TCO 2), total alkalinity (TALK), dissolved organic carbon (DOC), CFC, carbon-14, hydrographic, and other chemical measurements.« less

  2. Carbon dioxide, hydrographic, and chemical data obtained during the R/Vs Roger Revelle and Thomas Thompson repeat hydrography cruises in the Pacific Ocean: CLIVAR CO 2 sections P16S-2005 (9 January - 19 February, 2005) and P16N-2006 (13 February - 30 March, 2006)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kozyr, Alex; Feely, R. A.; Sabine, C. L.

    2009-05-01

    This report presents methods, and analytical and quality control procedures for salinity, oxygen, nutrients, total carbon dioxide (TCO 2), total alkalinity (TALK), pH, discrete CO 2 partial pressure (pCO 2), dissolved organic carbon (DOC), chlorofluorocarbons (CFCs), radiocarbon, δ13C, and underway carbon measurements performed during the P16S-2005 (9 January - 19 February 2005) and P16N-2006 (13 February - 30 March, 2006) cruises in the Pacific Ocean. The research vessel (R/V) Roger Revelle departed Papeete, Tahiti, on January 9, 2005 for the Repeat Section P16S, nominally along 150°W, ending in Wellington, New Zealand, on February 19. During this cruise, samples were takenmore » from 36 depths at 111 CTD stations between 16°S and 71°S. The Repeat Section P16N, nominally along 152°W, consisted of two legs. Leg 1 started on February 13, 2006 in Papeete, Tahiti, and finished on March 3, in Honolulu, Hawaii. The R/V Thomas G. Thompson departed Honolulu for Leg 2 on March 10, 2006 and arrived in Kodiak, Alaska, on March 30. During the P16N cruises, samples were taken from 34 or 36 depths at 84 stations between 17°S and 56.28°N. The research conducted on these cruises was part of a series of repeat hydrography sections jointly funded by the National Oceanic and Atmospheric Administration (NOAA) and the National Science Foundation (NSF) as part of the Climate Variability Program (CLIVAR)/CO 2 Repeat Hydrography Program. The P16S and P16N data sets are available free of charge as a numeric data package (NDP) from the Carbon Dioxide Information Analysis Center (CDIAC). The NDP consists of the oceanographic data files and this printed documentation, which describes the procedures and methods used to obtain the data.« less

  3. Carbon Dioxide, Hydrographic, and Chemical Data Obtained During the R/V Ronald H. Brown Repeat Hydrography Cruise in the Atlantic Ocean: CLIVAR CO2 Section A16S_2005 (11 January - 24 February, 2005)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kozyr, Alex

    This report presents methods, and analytical and quality control procedures for salinity, oxygen, nutrient, inorganic carbon, organic carbon, chlorofluorocarbon (CFC), and bomb 14C system parameters performed during the A16S_2005 cruise, which took place from January 11 to February 24, 2005, aboard research vessel (R/V) Ronald H. Brown under the auspices of the National Oceanic and Atmospheric Administration (NOAA). The R/V Ronald H. Brown departed Punta Arenas, Chile, on January 11, 2005, and ended its cruise in Fortaleza, Brazil, on February 24, 2005. The research conducted was one of a series of repeat hydrography sections jointly funded by NOAA and themore » National Science Foundation as part of the CLIVAR/CO 2/repeat hydrography/tracer program. Samples were taken from 36 depths at 121 stations. The data presented in this report include the analyses of water samples for total inorganic carbon (TCO 2), fugacity of CO 2 (fCO 2), total alkalinity (TALK), pH, dissolved organic carbon (DOC), CFC, 14C, hydrographic, and other chemical measurements. The R/V Ronald H. Brown A16S_2005 data set is available free of charge as a numeric data package (NDP) from the Carbon Dioxide Information Analysis Center (CDIAC). The NDP consists of the oceanographic data files and this printed documentation, which describes the procedures and methods used to obtain the data.« less

  4. Changes in Ocean Heat, Carbon Content, and Ventilation: A Review of the First Decade of GO-SHIP Global Repeat Hydrography.

    PubMed

    Talley, L D; Feely, R A; Sloyan, B M; Wanninkhof, R; Baringer, M O; Bullister, J L; Carlson, C A; Doney, S C; Fine, R A; Firing, E; Gruber, N; Hansell, D A; Ishii, M; Johnson, G C; Katsumata, K; Key, R M; Kramp, M; Langdon, C; Macdonald, A M; Mathis, J T; McDonagh, E L; Mecking, S; Millero, F J; Mordy, C W; Nakano, T; Sabine, C L; Smethie, W M; Swift, J H; Tanhua, T; Thurnherr, A M; Warner, M J; Zhang, J-Z

    2016-01-01

    Global ship-based programs, with highly accurate, full water column physical and biogeochemical observations repeated decadally since the 1970s, provide a crucial resource for documenting ocean change. The ocean, a central component of Earth's climate system, is taking up most of Earth's excess anthropogenic heat, with about 19% of this excess in the abyssal ocean beneath 2,000 m, dominated by Southern Ocean warming. The ocean also has taken up about 27% of anthropogenic carbon, resulting in acidification of the upper ocean. Increased stratification has resulted in a decline in oxygen and increase in nutrients in the Northern Hemisphere thermocline and an expansion of tropical oxygen minimum zones. Southern Hemisphere thermocline oxygen increased in the 2000s owing to stronger wind forcing and ventilation. The most recent decade of global hydrography has mapped dissolved organic carbon, a large, bioactive reservoir, for the first time and quantified its contribution to export production (∼20%) and deep-ocean oxygen utilization. Ship-based measurements also show that vertical diffusivity increases from a minimum in the thermocline to a maximum within the bottom 1,500 m, shifting our physical paradigm of the ocean's overturning circulation.

  5. Inorganic and Organic Carbon, Nutrient, and Oxygen Data from the R/V Ronald H. Brown Repeat Hydrography Cruise in the Atlantic Ocean: CLIVAR CO2 Section A16N_2003a (4 June-11 August, 2003)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kozyr, Alex

    2005-08-30

    This report presents methods and analytical and quality control procedures for nutrient, oxygen, and inorganic carbon system parameters performed during the A16N_2003a cruise, which took place from June 4 to August 11, 2003 aboard NOAA Ship R/V Ronald H. Brown under auspices of the National Oceanic and Atmospheric Administration (NOAA). The first hydrographic leg (June 19–July 10) was from Reykjavik, Iceland, to Funchal, Madeira, Portugal along the 20°W meridian, and the second leg (July 15–August 11) continued operations from Funchal, Portugal to Natal, Brazil, on a track southward and ending at 6°S, 25°W. The research was the first in amore » decadal series of repeat hydrography sections jointly funded by NOAA and the National Science Foundation (NSF) as part of the CLIVAR/CO 2/hydrography/tracer program. Samples were taken from up to 34 depths at 150 stations. The data presented in this report includes the analyses of water samples for total inorganic carbon (TCO2), fugacity of CO 2 (fCO 2), total alkalinity (TALK), pH, nitrate (NO 3), nitrite (NO 2), phosphate (PO 4), silicate (SiO4), and dissolved oxygen (O 2). The R/V Ronald H. Brown A16N_2003a data set is available free of charge as a numeric data package (NDP) from the Carbon Dioxide Information Analysis Center (CDIAC). The NDP consists of the oceanographic data files and this printed documentation, which describes the procedures and methods used to obtain the data.« less

  6. Proceedings of the Fourth Laser Hydrography Symposium at Defence Research Centre and Royal Australian Navy Hydrographic Office

    NASA Astrophysics Data System (ADS)

    Penny, M. F.; Phillips, D. M.

    1981-03-01

    At this Symposium, research on laser hydrography and related development programs currently in progress in the United States of America, Canada, and Australia, were reported. The depth sounding systems described include the US Airborne Oceanographic Lidar and Hydrographic Airborne Laser Sounder, the Canadian Profiling Lidar Bathymeter, and the Australian Laser Airborne Depth Sounder. Other papers presented research on blue-green lasers, theoretical modelling, position fixing, and data processing.

  7. Hydrography change detection: the usefulness of surface channels derived From LiDAR DEMs for updating mapped hydrography

    USGS Publications Warehouse

    Poppenga, Sandra K.; Gesch, Dean B.; Worstell, Bruce B.

    2013-01-01

    The 1:24,000-scale high-resolution National Hydrography Dataset (NHD) mapped hydrography flow lines require regular updating because land surface conditions that affect surface channel drainage change over time. Historically, NHD flow lines were created by digitizing surface water information from aerial photography and paper maps. Using these same methods to update nationwide NHD flow lines is costly and inefficient; furthermore, these methods result in hydrography that lacks the horizontal and vertical accuracy needed for fully integrated datasets useful for mapping and scientific investigations. Effective methods for improving mapped hydrography employ change detection analysis of surface channels derived from light detection and ranging (LiDAR) digital elevation models (DEMs) and NHD flow lines. In this article, we describe the usefulness of surface channels derived from LiDAR DEMs for hydrography change detection to derive spatially accurate and time-relevant mapped hydrography. The methods employ analyses of horizontal and vertical differences between LiDAR-derived surface channels and NHD flow lines to define candidate locations of hydrography change. These methods alleviate the need to analyze and update the nationwide NHD for time relevant hydrography, and provide an avenue for updating the dataset where change has occurred.

  8. LOOP marine and estuarine monitoring program, 1978-95 : volume 3 : physical hydrography.

    DOT National Transportation Integrated Search

    1998-01-01

    The complex region of interest is associated with the Mississippi River deltaic plain. The estuarine portion (Barataria Basin) has resulted from the subsidence of abandoned river distributaries and associated marsh; the offshore region is strongly in...

  9. A new, accurate, global hydrography data for remote sensing and modelling of river hydrodynamics

    NASA Astrophysics Data System (ADS)

    Yamazaki, D.

    2017-12-01

    A high-resolution hydrography data is an important baseline data for remote sensing and modelling of river hydrodynamics, given the spatial scale of river network is much smaller than that of land hydrology or atmosphere/ocean circulations. For about 10 years, HydroSHEDS, developed based on the SRTM3 DEM, has been the only available global-scale hydrography data. However, the data availability at the time of HydroSHEDS development limited the quality of the represented river networks. Here, we developed a new global hydrography data using latest geodata such as the multi-error-removed elevation data (MERIT DEM), Landsat-based global water body data (GSWO & G3WBM), cloud-sourced open geography database (OpenStreetMap). The new hydrography data covers the entire globe (including boreal regions above 60N), and it represents more detailed structure of the world river network and contains consistent supplementary data layers such as hydrologically adjusted elevations and river channel width. In the AGU meeting, the developing methodology, assessed quality, and potential applications of the new global hydrography data will be introduced.

  10. ECOHAB - HYDROGRAPHY AND BIOLOGY TO PROVIDE INFORMATION FOR THE CONSTRUCTION OF A MODEL TO PREDICT THE INITIATION, MAINTANENCE AND DISPERSAL OF RED TIDE ON THE WEST COAST OF FLORIDA

    EPA Science Inventory

    This program is part of a larger program called ECOHAB: Florida that includes this study as well as physical oceanography, circulation patterns, and shelf scale modeling for predicting the occurrence and transport of Karenia brevis (=Gymnodinium breve) red tides. The physical par...

  11. Particle Mass in Deep-Water Benthic Nepheloid Layers: a Global Synthesis

    NASA Astrophysics Data System (ADS)

    Mishonov, A. V.; Gardner, W. D.; Richardson, M. J.

    2016-12-01

    The mass of particles in benthic nepheloid layers in the deep ocean is mapped using profiles of beam attenuation coefficient obtained with transmissometers interfaced with CTDs during WOCE, SAVE, JGOFS, CLIVAR-Repeat Hydrography, and other programs during the last four decades using data from over 8000 profiles from >70 cruises. We map the maximum concentration of particle mass near the seafloor and integrate the particle mass throughout the benthic nepheloid layer. In the Atlantic Ocean particle mass is greater in areas where eddy kinetic energy is high in overlying waters. Areas of high bottom particle concentrations and integrated benthic nepheloid layer particle loads include the western North Atlantic beneath the Gulf Stream meanders and eddies, Argentine Basin, parts of the Southern Ocean and areas around South Africa. Particle concentrations are low in most of the Pacific and tropical and subtropical Atlantic away from margins. This synthesis is useful for GEOTRACES and other global programs where knowing particle distribution is critical for understanding trace metal absorption, sediment-water exchange and near-bottom processes. Additionally, our synthesis provides baseline data to identify where mining of metal-rich nodules and metal sulfides on the seafloor may impact the benthic environment.

  12. NHDPlusHR: A national geospatial framework for surface-water information

    USGS Publications Warehouse

    Viger, Roland; Rea, Alan H.; Simley, Jeffrey D.; Hanson, Karen M.

    2016-01-01

    The U.S. Geological Survey is developing a new geospatial hydrographic framework for the United States, called the National Hydrography Dataset Plus High Resolution (NHDPlusHR), that integrates a diversity of the best-available information, robustly supports ongoing dataset improvements, enables hydrographic generalization to derive alternate representations of the network while maintaining feature identity, and supports modern scientific computing and Internet accessibility needs. This framework is based on the High Resolution National Hydrography Dataset, the Watershed Boundaries Dataset, and elevation from the 3-D Elevation Program, and will provide an authoritative, high precision, and attribute-rich geospatial framework for surface-water information for the United States. Using this common geospatial framework will provide a consistent basis for indexing water information in the United States, eliminate redundancy, and harmonize access to, and exchange of water information.

  13. Using altimetry to help explain patchy changes in hydrographic carbon measurements

    NASA Astrophysics Data System (ADS)

    Rodgers, Keith B.; Key, Robert M.; Gnanadesikan, Anand; Sarmiento, Jorge L.; Aumont, Olivier; Bopp, Laurent; Doney, Scott C.; Dunne, John P.; Glover, David M.; Ishida, Akio; Ishii, Masao; Jacobson, Andrew R.; Lo Monaco, Claire; Maier-Reimer, Ernst; Mercier, Herlé; Metzl, Nicolas; PéRez, Fiz F.; Rios, Aida F.; Wanninkhof, Rik; Wetzel, Patrick; Winn, Christopher D.; Yamanaka, Yasuhiro

    2009-09-01

    Here we use observations and ocean models to identify mechanisms driving large seasonal to interannual variations in dissolved inorganic carbon (DIC) and dissolved oxygen (O2) in the upper ocean. We begin with observations linking variations in upper ocean DIC and O2 inventories with changes in the physical state of the ocean. Models are subsequently used to address the extent to which the relationships derived from short-timescale (6 months to 2 years) repeat measurements are representative of variations over larger spatial and temporal scales. The main new result is that convergence and divergence (column stretching) attributed to baroclinic Rossby waves can make a first-order contribution to DIC and O2 variability in the upper ocean. This results in a close correspondence between natural variations in DIC and O2 column inventory variations and sea surface height (SSH) variations over much of the ocean. Oceanic Rossby wave activity is an intrinsic part of the natural variability in the climate system and is elevated even in the absence of significant interannual variability in climate mode indices. The close correspondence between SSH and both DIC and O2 column inventories for many regions suggests that SSH changes (inferred from satellite altimetry) may prove useful in reducing uncertainty in separating natural and anthropogenic DIC signals (using measurements from Climate Variability and Predictability's CO2/Repeat Hydrography program).

  14. Production of a national 1:1,000,000-scale hydrography dataset for the United States: feature selection, simplification, and refinement

    USGS Publications Warehouse

    Gary, Robin H.; Wilson, Zachary D.; Archuleta, Christy-Ann M.; Thompson, Florence E.; Vrabel, Joseph

    2009-01-01

    During 2006-09, the U.S. Geological Survey, in cooperation with the National Atlas of the United States, produced a 1:1,000,000-scale (1:1M) hydrography dataset comprising streams and waterbodies for the entire United States, including Puerto Rico and the U.S. Virgin Islands, for inclusion in the recompiled National Atlas. This report documents the methods used to select, simplify, and refine features in the 1:100,000-scale (1:100K) (1:63,360-scale in Alaska) National Hydrography Dataset to create the national 1:1M hydrography dataset. Custom tools and semi-automated processes were created to facilitate generalization of the 1:100K National Hydrography Dataset (1:63,360-scale in Alaska) to 1:1M on the basis of existing small-scale hydrography datasets. The first step in creating the new 1:1M dataset was to address feature selection and optimal data density in the streams network. Several existing methods were evaluated. The production method that was established for selecting features for inclusion in the 1:1M dataset uses a combination of the existing attributes and network in the National Hydrography Dataset and several of the concepts from the methods evaluated. The process for creating the 1:1M waterbodies dataset required a similar approach to that used for the streams dataset. Geometric simplification of features was the next step. Stream reaches and waterbodies indicated in the feature selection process were exported as new feature classes and then simplified using a geographic information system tool. The final step was refinement of the 1:1M streams and waterbodies. Refinement was done through the use of additional geographic information system tools.

  15. NATIONAL HYDROGRAPHY DATASET

    EPA Science Inventory

    Resource Purpose:The National Hydrography Dataset (NHD) is a comprehensive set of digital spatial data that contains information about surface water features such as lakes, ponds, streams, rivers, springs and wells. Within the NHD, surface water features are combined to fo...

  16. CCHDO: Data Management for US and International GO-SHIP and Related Programs

    NASA Astrophysics Data System (ADS)

    Diggs, S. C.

    2016-02-01

    An ever-expanding universe of oceanographic data that includes ship-based measurements (CTD, Nutrients, CFCs, etc.) - as well as the data collected from floats, drifters, gliders and moorings - are continuously gathered, scrutinized, documented and disseminated by the CLIVAR and Carbon Hydrographic Data Office (CCHDO) at Scripps Institution of Oceanography. As the official data assembly center for US GO-SHIP (a decadal global hydrography program) the CCHDO is involved in setting and promoting standards of modern data exchange - from observations at sea to final archive. Established in 1996, the CCHDO has a solid history of curating the highest quality full-depth hydrographic data and associated documentation, metadata and DOIs on an API-based web site that provides data in multiple formats and platforms that have been specifically requested by the hydrographic research community. The CCHDO's website, programming platforms, and documentation standards constantly evolve, based on the feedback we receive from the hydrographic community. Technical convergence and collaboration with organizations that include CDIAC, Princeton, NOAA/NCEI, Argo, OceanSITES, BCO-DMO and GO-SHIP is central to our success. We were early adopters of small crowd-sourcing for quality control, and by being involved in all aspects of data use we reintegrate suggested changes to the data, flags and documentation supplied by the most highly recognized and regarded hydrography researchers and institutions in the world.

  17. Multi-scale interactions between local hydrography, seabed topography, and community assembly on cold-water coral reefs

    NASA Astrophysics Data System (ADS)

    Henry, L.-A.; Moreno Navas, J.; Roberts, J. M.

    2013-04-01

    We investigated how interactions between hydrography, topography and species ecology influence the assembly of species and functional traits across multiple spatial scales of a cold-water coral reef seascape. In a novel approach for these ecosystems, we used a spatially resolved complex three-dimensional flow model of hydrography to help explain assembly patterns. Forward-selection of distance-based Moran's eigenvector mapping (dbMEM) variables identified two submodels of spatial scales at which communities change: broad-scale (across reef) and fine-scale (within reef). Variance partitioning identified bathymetric and hydrographic gradients important in creating broad-scale assembly of species and traits. In contrast, fine-scale assembly was related more to processes that created spatially autocorrelated patches of fauna, such as philopatric recruitment in sessile fauna, and social interactions and food supply in scavenging detritivores and mobile predators. Our study shows how habitat modification of reef connectivity and hydrography by bottom fishing and renewable energy installations could alter the structure and function of an entire cold-water coral reef seascape.

  18. Channel Classification across Arid West Landscapes in Support of OHW Delineation

    DTIC Science & Technology

    2013-01-01

    8 Figure 5. National Hydrography Dataset for Chinle Creek, AZ...the OHW boundary is determined by observing recent physical evidence subsequent to flow. Channel morphology and physical features associated with the...data from the National Hydrography Dataset (NHD) (USGS 2010). The NHD digital ERDC/CRREL TR-13-3 9 stream data were downloaded as a line

  19. Decadal changes in the aragonite and calcite saturation state of the Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Feely, Richard A.; Sabine, Christopher L.; Byrne, Robert H.; Millero, Frank J.; Dickson, Andrew G.; Wanninkhof, Rik; Murata, Akihiko; Miller, Lisa A.; Greeley, Dana

    2012-09-01

    Based on measurements from the WOCE/JGOFS global CO2 survey, the CLIVAR/CO2 Repeat Hydrography Program and the Canadian Line P survey, we have observed an average decrease of 0.34% yr-1 in the saturation state of surface seawater in the Pacific Ocean with respect to aragonite and calcite. The upward migrations of the aragonite and calcite saturation horizons, averaging about 1 to 2 m yr-1, are the direct result of the uptake of anthropogenic CO2 by the oceans and regional changes in circulation and biogeochemical processes. The shoaling of the saturation horizon is regionally variable, with more rapid shoaling in the South Pacific where there is a larger uptake of anthropogenic CO2. In some locations, particularly in the North Pacific Subtropical Gyre and in the California Current, the decadal changes in circulation can be the dominant factor in controlling the migration of the saturation horizon. If CO2 emissions continue as projected over the rest of this century, the resulting changes in the marine carbonate system would mean that many coral reef systems in the Pacific would no longer be able to sustain a sufficiently high rate of calcification to maintain the viability of these ecosystems as a whole, and these changes perhaps could seriously impact the thousands of marine species that depend on them for survival.

  20. Wind-driven upwelling effects on cephalopod paralarvae: Octopus vulgaris and Loliginidae off the Galician coast (NE Atlantic)

    NASA Astrophysics Data System (ADS)

    Otero, Jaime; Álvarez-Salgado, X. Antón; González, Ángel F.; Souto, Carlos; Gilcoto, Miguel; Guerra, Ángel

    2016-02-01

    Circulation patterns of coastal upwelling areas may have central consequences for the abundance and cross-shelf transport of the larval stages of many species. Previous studies have provided evidences that larvae distribution results from a combination of subtidal circulation, species-specific behaviour and larval sources. However, most of these works were conducted on organisms characterised by small-sized and abundant early life phases. Here, we studied the influence of the hydrography and circulation of the Ría de Vigo and adjacent shelf (NW Iberian upwelling system) on the paralarval abundance of two contrasting cephalopods, the benthic common octopus (Octopus vulgaris) and the pelagic squids (Loliginidae). We sampled repeatedly a cross-shore transect during the years 2003-2005 and used zero inflated models to accommodate the scarcity and patchy distribution of cephalopod paralarvae. The probability of catching early stages of both cephalopods was higher at night. Octopus paralarvae were more abundant in the surface layer at night whereas loliginids preferred the bottom layer regardless of the sampling time. Abundance of both cephalopods increased when shelf currents flowed polewards, water temperature was high and water column stability was low. The probability of observing an excess of zero catches decreased during the year for octopus and at high current speed for loliginids. In addition, the circulation pattern conditioned the body size distribution of both paralarvae; while the average size of the captured octopuses increased (decreased) with poleward currents at daylight (nighttime), squids were smaller with poleward currents regardless of the sampling time. These results contribute to the understanding of the effects that the hydrography and subtidal circulation of a coastal upwelling have on the fate of cephalopod early life stages.

  1. Turbulence Observations in the Upper Ocean During the Surface Wave Processes Program in the Northeast Pacific, February to March 1990

    DTIC Science & Technology

    1992-01-01

    AD-A283 895 S cientific Excellence • Resource Protection & Conservation • Benefits for Canadians Excellence scientifique • Protection et conservation...V8L 4B2 . 1992 Thi- :lci,,-nrit has been approved1 Icr P’--1iC •Lae•_se and sole; its J dIt:isbution is tuoni-ited. Canadian Data Report of...Hydrography and Ocean Sciences No. 106 94-27566 • 94 8 26 116 I I Fisheries Pdches and Oceans et Oceans Ca adc Canadian Data Report Of II’.drographý and Ocean

  2. 30 Years of Repeat Hydrography in the Mediterranean

    NASA Astrophysics Data System (ADS)

    Tanhua, T. S.; Schroeder, K.; Hainbucher, D.; Alvarez, M.; Cardin, V. R.; Civitarese, G.; Bryden, H. L.; Chiggiato, J.

    2016-02-01

    The Mediterranean Sea is a semi-enclosed Sea characterized by high salinities, temperatures and densities. The net evaporation exceeds the precipitation that, coupled to net heat-loss, drives an anti-estuarine, shallow overturning circulation through the Strait of Gibraltar that communicates directly with the Atlantic Ocean. The Mediterranean Sea also has an active deep water overturning circulation with one cell in each main basin. It is surrounded by populated areas and is thus sensitive to anthropogenic forcing. In a biogeochemical sense the Mediterranean Sea is characterized by very low nutrient and high oxygen concentrations. The high temperature and alkalinity coupled with the well ventilated waters make the Mediterranean Sea an area with very high average anthropogenic CO2 (Cant) concentration, so that the basin acts as a globally significant Cant sink despite its low volume. Several dramatic changes in the oceanographic and biogeochemical conditions have been observed during the past several decades, emphasising the need to better monitor and understand the changing conditions and their drivers. Although no Mediterranean section was conducted within the WOCE program, several full depth hydrogeochemical cruises has been performed in the Mediterranean Sea during the past several decades, although mostly not covering the whole Mediterranean. During 2011 three oceanographic cruises were conducted in a coordinated fashion in order to produce base-line data of important physical and biogeochemical parameters that can be compared to historic data and be used as reference for future observational campaigns. Since then a zonal section through the Med has been adopted by the international GO-SHIP program to be regularly sampled on a sub-decadal basis. This contribution shows results on major changes in Mediterranean oceanographic conditions during the past 3 decades.

  3. EMODNet Hydrography - Seabed Mapping - Developing a higher resolution digital bathymetry for the European seas

    NASA Astrophysics Data System (ADS)

    Schaap, Dick M. A.; Moussat, Eric

    2013-04-01

    In December 2007 the European Parliament and Council adopted the Marine Strategy Framework Directive (MSFD) which aims to achieve environmentally healthy marine waters by 2020. This Directive includes an initiative for an overarching European Marine Observation and Data Network (EMODNet). The EMODNet Hydrography - Seabed Mapping projects made good progress in developing the EMODNet Hydrography portal to provide overview and access to available bathymetric survey datasets and to generate an harmonised digital bathymetry for Europe's sea basins. Up till end 2012 more than 8400 bathymetric survey datasets, managed by 14 data centres from 9 countries and originated from 118 institutes, have been gathered and populated in the EMODNet Hydrography Data Discovery and Access service, adopting SeaDataNet standards. These datasets have been used as input for analysing and generating the EMODNet digital terrain model (DTM), so far for the following sea basins: • the Greater North Sea, including the Kattegat • the English Channel and Celtic Seas • Western and Central Mediterranean Sea and Ionian Sea • Bay of Biscay, Iberian coast and North-East Atlantic • Adriatic Sea • Aegean - Levantine Sea (Eastern Mediterranean). • Azores - Madeira EEZ The Hydrography Viewing service gives users wide functionality for viewing and downloading the EMODNet digital bathymetry: • water depth in gridded form on a DTM grid of a quarter a minute of longitude and latitude • option to view QC parameters of individual DTM cells and references to source data • option to download DTM tiles in different formats: ESRI ASCII, XYZ, CSV, NetCDF (CF), GeoTiff and SD for Fledermaus 3 D viewer software • option for users to create their Personal Layer and to upload multibeam survey ASCII datasets for automatic processing into personal DTMs following the EMODNet standards The NetCDF (CF) DTM files are fit for use in a special 3D Viewer software package which is based on the existing open source NASA World Wind JSK application. It has been developed in the frame of the EU Geo-Seas project (another sibling of SeaDataNet for marine geological and geophysical data) and is freely available. The 3D viewer also supports the ingestion of WMS overlay maps. The EMODNet consortium is actively seeking cooperation with Hydrographic Offices, research institutes, authorities and private organisations for additional data sets (single and multibeam surveys, sounding tracks, composite products) to contribute to an even better geographical coverage. These datasets will be used for upgrading and extending the EMODNet regional Digital Terrain Models (DTM). The datasets themselves are not distributed but described in the metadata service, giving clear information about the background survey data used for the DTM, their access restrictions, originators and distributors and facilitating requests by users to originators. This way the portal provides originators of bathymetric data sets an attractive shop window for promoting their data sets to potential users, without losing control. The EMODNet Hydrography Consortium consists of MARIS (NL), ATLIS (NL), IFREMER (FR), SHOM (FR), IEO (ES), GSI (IE), NERC-NOCS (UK), OGS (IT), HCMR (GR), and UNEP/GRID-Arendal (NO) with associate partners CNR-ISMAR (IT), OGS-RIMA (IT), IHPT (PT), and LNEG (PT). Website: http://www.emodnet-hydrography.eu

  4. The National Map hydrography data stewardship: what is it and why is it important?

    USGS Publications Warehouse

    Arnold, Dave

    2014-01-01

    The National Hydrography Dataset (NHD) and Watershed Boundary Dataset (WBD) were designed and populated by a large consortium of agencies involved in hydrography across the United States. The effort was led by the U.S. Geological Survey (USGS), the U.S. Environmental Protection Agency (EPA), and the Natural Resources Conservation Service (NRCS). The high-resolution NHD dataset, completed in 2007, is based on the USGS 7.5-minute series topographic maps at a scale of 1:24,000. There are now 26 million features in the NHD representing a 7.5 million mile stream network with over 6.5 million waterbodies. The six-level WBD, completed in 2010, is based on 1:24,000 scale data and contains over 23,000 watershed polygons. The NHD’s flow network, attribution, and linear referencing are used to conduct extensive scientific analyses. The NHD is ideal for cartographic applications such as the US Topo topographic map series, and also is available on the Geospatial Platform, which provides shared and trusted geospatial data, services, and applications for use by government agencies, their partners, and the public. The WBD watersheds are used by scientists and managers to identify discrete drainage areas. The ongoing maintenance of the NHD and WBD is essential for improving these datasets to meet the ever increasing demand for currency, additional detail, and more significant attribution. The best source of information about changes in local hydrography are users closest to the data, such as State and local governments, as well as Federal land management agencies, and other users of the data. The need for local knowledge has led to the creation of a collaborative data stewardship process to revise and maintain the NHD.

  5. A multidimensional representation model of geographic features

    USGS Publications Warehouse

    Usery, E. Lynn; Timson, George; Coletti, Mark

    2016-01-28

    A multidimensional model of geographic features has been developed and implemented with data from The National Map of the U.S. Geological Survey. The model, programmed in C++ and implemented as a feature library, was tested with data from the National Hydrography Dataset demonstrating the capability to handle changes in feature attributes, such as increases in chlorine concentration in a stream, and feature geometry, such as the changing shoreline of barrier islands over time. Data can be entered directly, from a comma separated file, or features with attributes and relationships can be automatically populated in the model from data in the Spatial Data Transfer Standard format.

  6. Topographic and hydrographic GIS dataset for the Afghanistan Geological Survey and U.S. Geological Survey 2010 Minerals Project

    USGS Publications Warehouse

    Chirico, P.G.; Moran, T.W.

    2011-01-01

    This dataset contains a collection of 24 folders, each representing a specific U.S. Geological Survey area of interest (AOI; fig. 1), as well as datasets for AOI subsets. Each folder includes the extent, contours, Digital Elevation Model (DEM), and hydrography of the corresponding AOI, which are organized into feature vector and raster datasets. The dataset comprises a geographic information system (GIS), which is available upon request from the USGS Afghanistan programs Web site (http://afghanistan.cr.usgs.gov/minerals.php), and the maps of the 24 areas of interest of the USGS AOIs.

  7. Mean hydrography on the continental shelf from 26 repeat glider deployments along Southeastern Australia

    NASA Astrophysics Data System (ADS)

    Schaeffer, Amandine; Roughan, Moninya; Austin, Tim; Everett, Jason D.; Griffin, David; Hollings, Ben; King, Edward; Mantovanelli, Alessandra; Milburn, Stuart; Pasquer, Benedicte; Pattiaratchi, Charitha; Robertson, Robin; Stanley, Dennis; Suthers, Iain; White, Dana

    2016-08-01

    Since 2008, 26 glider missions have been undertaken along the continental shelf of southeastern Australia. Typically these missions have spanned the continental shelf on the inshore edge of the East Australian Current from 29.5-33.5°S. This comprehensive dataset of over 33,600 CTD profiles from the surface to within 10 m of the bottom in water depths ranging 25-200 m provides new and unprecedented high resolution observations of the properties of the continental shelf waters adjacent to a western boundary current, straddling the region where it separates from the coast. The region is both physically and biologically significant, and is also in a hotspot of ocean warming. We present gridded mean fields for temperature, salinity and density, but also dissolved oxygen and chlorophyll-a fluorescence indicative of phytoplankton biomass. This data will be invaluable for understanding shelf stratification, circulation, biophysical and bio-geochemical interactions, as well as for the validation of high-resolution ocean models or serving as teaching material.

  8. Mean hydrography on the continental shelf from 26 repeat glider deployments along Southeastern Australia.

    PubMed

    Schaeffer, Amandine; Roughan, Moninya; Austin, Tim; Everett, Jason D; Griffin, David; Hollings, Ben; King, Edward; Mantovanelli, Alessandra; Milburn, Stuart; Pasquer, Benedicte; Pattiaratchi, Charitha; Robertson, Robin; Stanley, Dennis; Suthers, Iain; White, Dana

    2016-08-30

    Since 2008, 26 glider missions have been undertaken along the continental shelf of southeastern Australia. Typically these missions have spanned the continental shelf on the inshore edge of the East Australian Current from 29.5-33.5°S. This comprehensive dataset of over 33,600 CTD profiles from the surface to within 10 m of the bottom in water depths ranging 25-200 m provides new and unprecedented high resolution observations of the properties of the continental shelf waters adjacent to a western boundary current, straddling the region where it separates from the coast. The region is both physically and biologically significant, and is also in a hotspot of ocean warming. We present gridded mean fields for temperature, salinity and density, but also dissolved oxygen and chlorophyll-a fluorescence indicative of phytoplankton biomass. This data will be invaluable for understanding shelf stratification, circulation, biophysical and bio-geochemical interactions, as well as for the validation of high-resolution ocean models or serving as teaching material.

  9. The Great Lakes Hydrography Dataset: Consistent, binational ...

    EPA Pesticide Factsheets

    Ecosystem-based management of the Laurentian Great Lakes, which spans both the United States and Canada, is hampered by the lack of consistent binational watersheds for the entire Basin. Using comparable data sources and consistent methods we developed spatially equivalent watershed boundaries for the binational extent of the Basin to create the Great Lakes Hydrography Dataset (GLHD). The GLHD consists of 5,589 watersheds for the entire Basin, covering a total area of approximately 547,967 km2, or about twice the 247,003 km2 surface water area of the Great Lakes. The GLHD improves upon existing watershed efforts by delineating watersheds for the entire Basin using consistent methods; enhancing the precision of watershed delineation by using recently developed flow direction grids that have been hydrologically enforced and vetted by provincial and federal water resource agencies; and increasing the accuracy of watershed boundaries by enforcing embayments, delineating watersheds on islands, and delineating watersheds for all tributaries draining to connecting channels. In addition, the GLHD is packaged in a publically available geodatabase that includes synthetic stream networks, reach catchments, watershed boundaries, a broad set of attribute data for each tributary, and metadata documenting methodology. The GLHD provides a common set of watersheds and associated hydrography data for the Basin that will enhance binational efforts to protect and restore the Great

  10. Dynamically consistent hydrography and absolute velocity in the eastern North Atlantic Ocean

    NASA Technical Reports Server (NTRS)

    Wunsch, Carl

    1994-01-01

    The problem of mapping a dynamically consistent hydrographic field and associated absolute geostrophic flow in the eastern North Atlantic between 24 deg and 36 deg N is related directly to the solution of the so-called thermocline equations. A nonlinear optimization problem involving Needler's P equation is solved to find the hydrography and resulting flow that minimizes the vertical mixing above about 1500 m in the ocean and is simultaneously consistent with the observations. A sharp minimum (at least in some dimensions) is found, apparently corresponding to a solution nearly conserving potential vorticity and with vertical eddy coefficient less than about 10(exp -5) sq m/s. Estimates of `residual' quantities such as eddy coefficients are extremely sensitive to slight modifications to the observed fields. Boundary conditions, vertical velocities, etc., are a product of the optimization and produce estimates differing quantitatively from prior ones relying directly upon observed hydrography. The results are generally insensitive to particular elements of the solution methodology, but many questions remain concerning the extent to which different synoptic sections can be asserted to represent the same ocean. The method can be regarded as a practical generalization of the beta spiral and geostrophic balance inverses for the estimate of absolute geostrophic flows. Numerous improvements to the methodology used in this preliminary attempt are possible.

  11. Global assessment of benthic nepheloid layers and linkage with upper ocean dynamics

    NASA Astrophysics Data System (ADS)

    Gardner, Wilford D.; Richardson, Mary Jo; Mishonov, Alexey V.

    2018-01-01

    Global maps of the maximum bottom concentration, thickness, and integrated particle mass in benthic nepheloid layers are published here to support collaborations to understand deep ocean sediment dynamics, linkage with upper ocean dynamics, and assessing the potential for scavenging of adsorption-prone elements near the deep ocean seafloor. Mapping the intensity of benthic particle concentrations from natural oceanic processes also provides a baseline that will aid in quantifying the industrial impact of current and future deep-sea mining. Benthic nepheloid layers have been mapped using 6,392 full-depth profiles made during 64 cruises using our transmissometers mounted on CTDs in multiple national/international programs including WOCE, SAVE, JGOFS, CLIVAR-Repeat Hydrography, and GO-SHIP during the last four decades. Intense benthic nepheloid layers are found in areas where eddy kinetic energy in overlying waters, mean kinetic energy 50 m above bottom (mab), and energy dissipation in the bottom boundary layer are near the highest values in the ocean. Areas of intense benthic nepheloid layers include the Western North Atlantic, Argentine Basin in the South Atlantic, parts of the Southern Ocean and areas around South Africa. Benthic nepheloid layers are weak or absent in most of the Pacific, Indian, and Atlantic basins away from continental margins. High surface eddy kinetic energy is associated with the Kuroshio Current east of Japan. Data south of the Kuroshio show weak nepheloid layers, but no transmissometer data exist beneath the Kuroshio, a deficiency that should be remedied to increase understanding of eddy dynamics in un-sampled and under-sampled oceanic areas.

  12. Direct Measurements of Iceberg Melt in Greenland Tidewater Glacier Fjords

    NASA Astrophysics Data System (ADS)

    Schild, K. M.; Sutherland, D.; Straneo, F.; Elosegui, P.

    2017-12-01

    The increasing input of freshwater to the subpolar North Atlantic, both through glacier meltwater runoff and the melting of calved icebergs, has significant implications for the Atlantic meridional overturning circulation and regional scale circulation. However, the magnitude and timing of this meltwater input has been challenging to quantify because iceberg melt rates are largely unknown. Here we use data from a simultaneous glaciological and oceanographic field campaign conducted in Sermilik Fjord, southeast Greenland, during July 2017 to map the surface and submarine geometry of large icebergs and use repeat surveys to directly measure iceberg melt rates. We use a combination of coincident ship-based multibeam submarine scans, ocean hydrography measurements, aerial drone mapping, and high precision iceberg-mounted GPS measurements to construct a detailed picture of iceberg geometry and melt. This synthesis of in situ iceberg melt measurements is amongst the first of its kind. Here, we will discuss the results of the 2017 field campaign, the implications of variable iceberg meltwater input throughout the water column, and comparisons to standard melt rate parameterizations and tidewater glacier submarine melt rate calculations.

  13. Mean hydrography on the continental shelf from 26 repeat glider deployments along Southeastern Australia

    PubMed Central

    Schaeffer, Amandine; Roughan, Moninya; Austin, Tim; Everett, Jason D.; Griffin, David; Hollings, Ben; King, Edward; Mantovanelli, Alessandra; Milburn, Stuart; Pasquer, Benedicte; Pattiaratchi, Charitha; Robertson, Robin; Stanley, Dennis; Suthers, Iain; White, Dana

    2016-01-01

    Since 2008, 26 glider missions have been undertaken along the continental shelf of southeastern Australia. Typically these missions have spanned the continental shelf on the inshore edge of the East Australian Current from 29.5–33.5°S. This comprehensive dataset of over 33,600 CTD profiles from the surface to within 10 m of the bottom in water depths ranging 25–200 m provides new and unprecedented high resolution observations of the properties of the continental shelf waters adjacent to a western boundary current, straddling the region where it separates from the coast. The region is both physically and biologically significant, and is also in a hotspot of ocean warming. We present gridded mean fields for temperature, salinity and density, but also dissolved oxygen and chlorophyll-a fluorescence indicative of phytoplankton biomass. This data will be invaluable for understanding shelf stratification, circulation, biophysical and bio-geochemical interactions, as well as for the validation of high-resolution ocean models or serving as teaching material. PMID:27575831

  14. Hydrography and bottom boundary layer dynamics: Influence on inner shelf sediment mobility, Long Bay, North Carolina

    USGS Publications Warehouse

    Davis, L.A.; Leonard, L.A.; Snedden, G.A.

    2008-01-01

    This study examined the hydrography and bottom boundary-layer dynamics of two typical storm events affecting coastal North Carolina (NC); a hurricane and the passages of two small consecutive extratropical storms during November 2005. Two upward-looking 1200-kHz Acoustic Doppler Current Profilers (ADCP) were deployed on the inner shelf in northern Long Bay, NC at water depths of less than 15 m. Both instruments profiled the overlying water column in 0.35 in bins beginning at a height of 1.35 in above the bottom (mab). Simultaneous measurements of wind speed and direction, wave and current parameters, and acoustic backscatter were coupled with output from a bottom boundary layer (bbl) model to describe the hydrography and boundary layer conditions during each event. The bbl model also was used to quantify sediment transport in the boundary layer during each storm. Both study sites exhibited similar temporal variations in wave and current magnitude, however, wave heights during the November event were higher than waves associated with the hurricane. Near-bottom mean and subtidal currents, however, were of greater magnitude during the hurricane. Peak depth-integrated suspended sediment transport during the November event exceeded transport associated with the hurricane by 25-70%. Substantial spatial variations in sediment transport existed throughout both events. During both events, along-shelf sediment transport exceeded across-shelf transport and was related to the magnitude and direction of subtidal currents. Given the variations in sediment type across the bay, complex shoreline configuration, and local bathymetry, the sediment transport rates reported here are very site specific. However, the general hydrography associated with the two storms is representative of conditions across northern Long Bay. Since the beaches in the study area undergo frequent renourishment to counter the effects of beach erosion, the results of this study also are relevant to coastal management decision-making. Specifically, these issues include 1) identification of municipalities that should share the cost for renourishment given the likelihood for significant along-shelf sand movement and 2) appropriate timing of sand placement with respect to local climatology and sea-turtle nesting restrictions.

  15. NHDPlus (National Hydrography Dataset Plus)

    EPA Pesticide Factsheets

    NHDPlus is a geospatial, hydrologic framework dataset that is intended for use by geospatial analysts and modelers to support water resources related applications. NHDPlus was developed by the USEPA in partnership with the US Geologic Survey

  16. Eighteenth annual report of the United States Geological Survey to the Secretary of the Interior, 1896-1897: Part IV - Hydrography

    USGS Publications Warehouse

    Davis, Arthur Powell; Leverett, Frank; Darton, N.H.; Schuyler, J.D.

    1897-01-01

    The completion of this volume marks the revival of extended systematic investigation of the hydrography of the United State. This book is, in effect, the ninth annual report of what has been known as the Irrigation Survey. Its preparation and publication has been made possible by the act of June 11, 1896 (Stat. L., vol. 29, p. 436), which enlarged the scope of the work and authorized the preparation of reports upon the best methods of utilizing the water resources of arid and semiarid sections. For some years before this date the sums available for hydrographic work were so small that it was practicable merely to continue observations at previously established stations, compute discharges, and compile for publication the data accumulated in the office.

  17. National Hydrography Dataset (NHD)

    USGS Publications Warehouse

    ,

    2001-01-01

    The National Hydrography Dataset (NHD) is a feature-based database that interconnects and uniquely identifies the stream segments or reaches that make up the nation's surface water drainage system. NHD data was originally developed at 1:100,000 scale and exists at that scale for the whole country. High resolution NHD adds detail to the original 1:100,000-scale NHD. (Data for Alaska, Puerto Rico and the Virgin Islands was developed at high-resolution, not 1:100,000 scale.) Like the 1:100,000-scale NHD, high resolution NHD contains reach codes for networked features and isolated lakes, flow direction, names, stream level, and centerline representations for areal water bodies. Reaches are also defined to represent waterbodies and the approximate shorelines of the Great Lakes, the Atlantic and Pacific Oceans and the Gulf of Mexico. The NHD also incorporates the National Spatial Data Infrastructure framework criteria set out by the Federal Geographic Data Committee.

  18. Detecting the movement and spawning activity of bigheaded carps with environmental DNA.

    PubMed

    Erickson, Richard A; Rees, Christopher B; Coulter, Alison A; Merkes, Christopher M; McCalla, Sunnie G; Touzinsky, Katherine F; Walleser, Liza; Goforth, Reuben R; Amberg, Jon J

    2016-07-01

    Bigheaded carps are invasive fishes threatening to invade the Great Lakes basin and establish spawning populations, and have been monitored using environmental DNA (eDNA). Not only does eDNA hold potential for detecting the presence of species, but may also allow for quantitative comparisons like relative abundance of species across time or space. We examined the relationships among bigheaded carp movement, hydrography, spawning and eDNA on the Wabash River, IN, USA. We found positive relationships between eDNA and movement and eDNA and hydrography. We did not find a relationship between eDNA and spawning activity in the form of drifting eggs. Our first finding demonstrates how eDNA may be used to monitor species abundance, whereas our second finding illustrates the need for additional research into eDNA methodologies. Current applications of eDNA are widespread, but the relatively new technology requires further refinement. © 2016 John Wiley & Sons Ltd.

  19. Detecting the movement and spawning activity of bigheaded carps with environmental DNA

    USGS Publications Warehouse

    Erickson, Richard A.; Rees, Christopher B.; Coulter, Alison A.; Merkes, Christopher; McCalla, S. Grace; Touzinsky, Katherine F; Walleser, Liza R.; Goforth, Reuben R.; Amberg, Jon J.

    2016-01-01

    Bigheaded carps are invasive fishes threatening to invade the Great Lakes basin and establish spawning populations, and have been monitored using environmental DNA (eDNA). Not only does eDNA hold potential for detecting the presence of species, but may also allow for quantitative comparisons like relative abundance of species across time or space. We examined the relationships among bigheaded carp movement, hydrography, spawning and eDNA on the Wabash River, IN, USA. We found positive relationships between eDNA and movement and eDNA and hydrography. We did not find a relationship between eDNA and spawning activity in the form of drifting eggs. Our first finding demonstrates how eDNA may be used to monitor species abundance, whereas our second finding illustrates the need for additional research into eDNA methodologies. Current applications of eDNA are widespread, but the relatively new technology requires further refinement.

  20. Digital Mapping and Environmental Characterization of National Wild and Scenic River Systems

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    McManamay, Ryan A; Bosnall, Peter; Hetrick, Shelaine L

    2013-09-01

    Spatially accurate geospatial information is required to support decision-making regarding sustainable future hydropower development. Under a memorandum of understanding among several federal agencies, a pilot study was conducted to map a subset of National Wild and Scenic Rivers (WSRs) at a higher resolution and provide a consistent methodology for mapping WSRs across the United States and across agency jurisdictions. A subset of rivers (segments falling under the jurisdiction of the National Park Service) were mapped at a high resolution using the National Hydrography Dataset (NHD). The spatial extent and representation of river segments mapped at NHD scale were compared withmore » the prevailing geospatial coverage mapped at a coarser scale. Accurately digitized river segments were linked to environmental attribution datasets housed within the Oak Ridge National Laboratory s National Hydropower Asset Assessment Program database to characterize the environmental context of WSR segments. The results suggest that both the spatial scale of hydrography datasets and the adherence to written policy descriptions are critical to accurately mapping WSRs. The environmental characterization provided information to deduce generalized trends in either the uniqueness or the commonness of environmental variables associated with WSRs. Although WSRs occur in a wide range of human-modified landscapes, environmental data layers suggest that they provide habitats important to terrestrial and aquatic organisms and recreation important to humans. Ultimately, the research findings herein suggest that there is a need for accurate, consistent, mapping of the National WSRs across the agencies responsible for administering each river. Geospatial applications examining potential landscape and energy development require accurate sources of information, such as data layers that portray realistic spatial representations.« less

  1. A Tale of Two Inlets: Tidal Currents at Two Adjacent Inlets in the Indian River Lagoon

    NASA Astrophysics Data System (ADS)

    Webb, B. M.; Weaver, R. J.

    2012-12-01

    The tidal currents and hydrography at two adjacent inlets of the Indian River Lagoon estuary (Florida) were recently measured using a personal watercraft-based coastal profiling system. Although the two inlets—Sebastian Inlet and Port Canaveral Inlet—are separated by only 60 km, their characteristics and dynamics are quite unique. While Sebastian Inlet is a shallow (~4 m), curved inlet with a free connection to the estuary, Port Canaveral Inlet is dominated by a deep (~13 m), straight ship channel and has limited connectivity to the Banana River through a sector gate lock. Underway measurements of tidal currents were obtained using a bottom tracking acoustic Doppler current profiler; vertical casts of hydrography were obtained with a conductivity-temperature-depth profiling instrument; and continuous underway measurements of surface water hydrography were made using a Portable SeaKeeper system. Survey transects were performed to elucidate the along-channel variability of tidal flows, which appears to be significant in the presence of channel curvature. Ebb and flood tidal currents in Sebastian Inlet routinely exceeded 2.5 m/s from the surface to the bed, and an appreciable phase lag exists between tidal stage and current magnitude. The tidal currents at Port Canaveral Inlet were much smaller (~0.2 m/s) and appeared to be sensitive to meteorological forcing during the study period. Although the lagoon has free connections to the ocean 145 km to the north and 45 km to the south, Sebastian Inlet likely drains much of the lagoon to its north, an area of ~550 sq. km.

  2. Map Classification In Image Data

    DTIC Science & Technology

    2015-09-25

    showing the signicant portion of image and video data transfers via Youtube , Facebook, and Flickr as primary platforms from Infographic (2015) digital...reserves • hydrography: lakes, rivers, streams, swamps, coastal flats • relief: mountains, valleys, slopes, depressions • vegetation: wooded and cleared

  3. Hydrography and circulation west of Sardinia in June 2014

    NASA Astrophysics Data System (ADS)

    Knoll, Michaela; Borrione, Ines; Fiekas, Heinz-Volker; Funk, Andreas; Hemming, Michael P.; Kaiser, Jan; Onken, Reiner; Queste, Bastien; Russo, Aniello

    2017-11-01

    In the frame of the REP14-MED sea trial in June 2014, the hydrography and circulation west of Sardinia, observed by means of gliders, shipborne CTD (conductivity, temperature, depth) instruments, towed devices, and vessel-mounted ADCPs (acoustic doppler current profilers), are presented and compared with previous knowledge. So far, the circulation is not well-known in this area, and the hydrography is subject to long-term changes. Potential temperature, salinity, and potential density ranges as well as core values of the observed water masses were determined. Modified Atlantic Water (MAW), with potential density anomalies below 28.72 kg m-3, showed a salinity minimum of 37.93 at 50 dbar. Levantine Intermediate Water (LIW), with a salinity maximum of about 38.70 at 400 dbar, was observed within a range of 28.72<σΘ/(kg m-3) < 29.10. MAW and LIW showed slightly higher salinities than previous investigations. During the trial, LIW covered the whole area from the Sardinian shelf to 7°15' E. Only north of 40° N was it tied to the continental slope. Within the MAW, a cold and saline anticyclonic eddy was observed in the southern trial area. The strongest variability in temperature and salinity appeared around this eddy, and in the southwestern part of the domain, where unusually low saline surface water entered the area towards the end of the experiment. An anticyclonic eddy of Winter Intermediate Water was recorded moving northward at 0.014 m s-1. Geostrophic currents and water mass transports calculated across zonal and meridional transects showed a good agreement with vessel-mounted ADCP measurements. Within the MAW, northward currents were observed over the shelf and offshore, while a southward transport of about 1.5 Sv occurred over the slope. A net northward transport of 0.38 Sv across the southern transect decreased to zero in the north. Within the LIW, northward transports of 0.6 Sv across the southern transects were mainly observed offshore, and decreased to 0.3 Sv in the north where they were primarily located over the slope. This presentation of the REP14-MED observations helps to further understand the long-term evolution of hydrography and circulation in the Western Mediterranean, where considerable changes occurred after the Eastern Mediterranean Transient and the Western Mediterranean Transition.

  4. An Environmental Assessment of United States Drinking Water Watersheds

    EPA Science Inventory

    There is an emerging recognition that natural lands and their conservation are important elements of a sustainable drinking water infrastructure. We conducted a national, watershed-level environmental assessment of drinking water watersheds using data on land cover, hydrography a...

  5. CONNECTICUT SURFACE WATER QUALITY CLASSIFICATIONS

    EPA Science Inventory

    This is a 1:24,000-scale datalayer of Surface Water Quality Classifications for Connecticut. It is comprised of two 0Shapefiles with line and polygon features. Both Shapefiles must be used together with the Hydrography datalayer. The polygon Shapefile includes surface water qual...

  6. Neodymium in the oceans: a global database, a regional comparison and implications for palaeoceanographic research

    PubMed Central

    Griffiths, Alexander M.; Lambelet, Myriam; Little, Susan H.; Stichel, Torben; Wilson, David J.

    2016-01-01

    The neodymium (Nd) isotopic composition of seawater has been used extensively to reconstruct ocean circulation on a variety of time scales. However, dissolved neodymium concentrations and isotopes do not always behave conservatively, and quantitative deconvolution of this non-conservative component can be used to detect trace metal inputs and isotopic exchange at ocean–sediment interfaces. In order to facilitate such comparisons for historical datasets, we here provide an extended global database for Nd isotopes and concentrations in the context of hydrography and nutrients. Since 2010, combined datasets for a large range of trace elements and isotopes are collected on international GEOTRACES section cruises, alongside classical nutrient and hydrography measurements. Here, we take a first step towards exploiting these datasets by comparing high-resolution Nd sections for the western and eastern North Atlantic in the context of hydrography, nutrients and aluminium (Al) concentrations. Evaluating those data in tracer–tracer space reveals that North Atlantic seawater Nd isotopes and concentrations generally follow the patterns of advection, as do Al concentrations. Deviations from water mass mixing are observed locally, associated with the addition or removal of trace metals in benthic nepheloid layers, exchange with ocean margins (i.e. boundary exchange) and/or exchange with particulate phases (i.e. reversible scavenging). We emphasize that the complexity of some of the new datasets cautions against a quantitative interpretation of individual palaeo Nd isotope records, and indicates the importance of spatial reconstructions for a more balanced approach to deciphering past ocean changes. This article is part of the themed issue ‘Biological and climatic impacts of ocean trace element chemistry’. PMID:29035258

  7. Geochemistry of the Black Sea during the last 15 kyr: A protracted evolution of its hydrography and ecology

    USGS Publications Warehouse

    Piper, David Z.

    2016-01-01

    The Black Sea is a 2200 m deep anoxic, marine sea connected to the Mediterranean Sea via the Dardanelles Strait, Marmara Sea, and the 3 km wide, 35 m deep Bosphorus Strait. The biogeochemistry of sediment from the Anatolia slope has recorded changes to the hydrography leading up to and following the input of Mediterranean water at ~9.4 ka (103 years B.P.), when global sea level rose to the level of the Bosphorus sill and high-salinity water from the Mediterranean began to spill into the then brackish lake. The water initially mixed little with the lake water but cascaded to the bottom where it remained essentially isolated for ~1.6 kyr, the time required to fill the basin from the bottom up at its present input rate. The accumulation of Mo in the seafloor sediments, a proxy of bottom-water anoxia, increased sharply at ~8.6 ka, when bacterial respiration in the bottom water advanced to SO42− reduction by the oxidation of organic detritus that settled out of the photic zone. Its accumulation remained elevated to ~5.6 ka, when it decreased 60%, only to again increase slightly at ~2.0 ka. The accumulation of Corg, a proxy of primary productivity, increased threefold to fourfold at ~7.8 ka, when upward mixing of the high-salinity bottom water replaced the then thin veneer of the brackish photic zone in less than 50 years. From that time onward, the accumulation of Corg, Mo, and additional trace metals has reflected the hydrography of the basin and Bosphorus Strait, controlled largely by climate.

  8. The National Hydrography Dataset

    USGS Publications Warehouse

    ,

    1999-01-01

    The National Hydrography Dataset (NHD) is a newly combined dataset that provides hydrographic data for the United States. The NHD is the culmination of recent cooperative efforts of the U.S. Environmental Protection Agency (USEPA) and the U.S. Geological Survey (USGS). It combines elements of USGS digital line graph (DLG) hydrography files and the USEPA Reach File (RF3). The NHD supersedes RF3 and DLG files by incorporating them, not by replacing them. Users of RF3 or DLG files will find the same data in a new, more flexible format. They will find that the NHD is familiar but greatly expanded and refined. The DLG files contribute a national coverage of millions of features, including water bodies such as lakes and ponds, linear water features such as streams and rivers, and also point features such as springs and wells. These files provide standardized feature types, delineation, and spatial accuracy. From RF3, the NHD acquires hydrographic sequencing, upstream and downstream navigation for modeling applications, and reach codes. The reach codes provide a way to integrate data from organizations at all levels by linking the data to this nationally consistent hydrographic network. The feature names are from the Geographic Names Information System (GNIS). The NHD provides comprehensive coverage of hydrographic data for the United States. Some of the anticipated end-user applications of the NHD are multiuse hydrographic modeling and water-quality studies of fish habitats. Although based on 1:100,000-scale data, the NHD is planned so that it can incorporate and encourage the development of the higher resolution data that many users require. The NHD can be used to promote the exchange of data between users at the national, State, and local levels. Many users will benefit from the NHD and will want to contribute to the dataset as well.

  9. Repeat Customer Success in Extension

    ERIC Educational Resources Information Center

    Bess, Melissa M.; Traub, Sarah M.

    2013-01-01

    Four multi-session research-based programs were offered by two Extension specialist in one rural Missouri county. Eleven participants who came to multiple Extension programs could be called "repeat customers." Based on the total number of participants for all four programs, 25% could be deemed as repeat customers. Repeat customers had…

  10. North Pacific Origins of Northern Hemisphere Glaciations: The View from the Kuroshio Extension

    NASA Astrophysics Data System (ADS)

    Venti, N. L.; Billups, K.; Herbert, T.

    2013-12-01

    In modern climate, westerly winds augmented by the East Asian winter monsoon (EAWM) cause prodigious ocean-atmosphere heat flux (>100 Wm-2) and provide the primary source of iron to the micronutrient-limited North Pacific. Here we present a suite of high-resolution (2500-year time step) Plio-Pleistocene (3.00-1.76 Ma) proxy records generated in the Kuroshio Current Extension (KCE; Ocean Drilling Program Site 1208). These suggest regularly increased interaction of the EAWM with the North Pacific Ocean prior to obliquity-paced Northern Hemisphere glaciations (NHG). We propose that in the Pleistocene, obliquity-paced EAWM intensification caused NHG by 1) advecting heat and moisture to the atmosphere for snow fall over North America and 2) delivering iron via dust to fertilize the basin, thereby increasing primary productivity and reducing atmospheric CO2 concentrations. To further test this hypothesis, we are exploring appropriate dust proxies and high-resolution CO2 reconstruction. To examine heat transfer, we reconstruct seasonal sea surface temperature (SST) by comparing summer hydrography (salinity and temperature) to a mean annual SST estimate. Planktic foraminifer (warm-water dwelling Globigerinoides ruber) Δδ18O values reflect summer hydrography--KCE warmth. An alkenone-based annual mean SST estimate, on the other hand, incorporates winter cooling from EAWM-enhanced westerlies. With NHG onset at 2.73 Ma, summer SST increases while mean annual SST decreases, suggesting increased heat loss from the subtropical ocean to the mid-latitude atmosphere. On the orbital scale, summer hydrography varies with summer/fall overhead insolation at the 19-kyr precessional band, but not obliquity, a common low-latitude pattern. In contrast, mean annual SST varies primarily at the 41-kyr obliquity period, SST cycles leading high-latitude climate (benthic foraminifer δ18O values). This consistent relationship implies that increased ocean-atmosphere heat transfer in the NW Pacific contributed to rather than resulted from the glaciations. Alkenone mass accumulation rate (MAR), sediment lithology, and magnetic susceptibility support CO2 changes. Alkenone MAR reflects primary productivity because these recalcitrant compounds are produced by certain species of haptophyte algae. Increased productivity and macronutrient (Si, P, N) availability with NHG onset are inferred from increased mean alkenone MAR and decreased sediment reflectance values (low L*; opal-rich sediments) after 2.73 Ma. Like sea surface cooling, the primary productivity and macronutrient proxies vary primarily at 41-kyr periodicity, with regular increases preceding glaciations. Finally, magnetic susceptibility/accumulation should reflect eolian deposition of dust from Asia--EAWM intensity. Increased magnetic accumulation also regularly precedes obliquity-paced glaciations, but with a particularly long lead. This unusual timing may result from contributions of other considerations besides EAWM intensity, such as pedogenic processes affecting oxide phases in Asia.

  11. The Great Lakes Hydrography Dataset: Consistent, binational watersheds for the Laurentian Great Lakes Basin

    EPA Science Inventory

    Ecosystem-based management of the Laurentian Great Lakes, which spans both the United States and Canada, is hampered by the lack of consistent binational watersheds for the entire Basin. Using comparable data sources and consistent methods we developed spatially equivalent waters...

  12. Tulare Lake Basin Hydrology and Hydrography: A Summary of the Movement of Water and Aquatic Species

    EPA Pesticide Factsheets

    Summary of the historic and current hydrology of the Tulare Lake Basin (Basin) describing past, present and potential future movement of water out of the Basin, and potential movement of bioiogical organisms and toxicants within and outside of the Basin.

  13. Alaska national hydrography dataset positional accuracy assessment study

    USGS Publications Warehouse

    Arundel, Samantha; Yamamoto, Kristina H.; Constance, Eric; Mantey, Kim; Vinyard-Houx, Jeremy

    2013-01-01

    Initial visual assessments Wide range in the quality of fit between features in NHD and these new image sources. No statistical analysis has been performed to actually quantify accuracy Determining absolute accuracy is cost prohibitive (must collect independent, well defined test points) Quantitative analysis of relative positional error is feasible.

  14. 78 FR 25095 - Notice of an Extension of an Information Collection (1028-0092)

    Federal Register 2010, 2011, 2012, 2013, 2014

    2013-04-29

    ... the development of The National Map and other national geospatial databases. In FY 2010, projects for... including elevation, orthoimagery, hydrography and other layers in the national databases may be possible. We will accept applications from State, local or tribal governments and academic institutions to...

  15. Landscape Metrics Arranged by Hydrological Proximity to Sites on Mississippi, Missouri, and Ohio Rivers

    EPA Science Inventory

    This work has been published to demonstrate an application that the authors made of the geospatial National Hydrography Dataset (NHDPlus) that was developed by Horizon Systems Corporation for the US EPA. NHDPlus was produced to enhance hydrological maps of the United States for ...

  16. Stream ecological condition modeling at the reach and the hydrologic unit (HUC) scale: A look at model performance and mapping

    EPA Science Inventory

    The National Hydrography and updated Watershed Boundary Datasets provide a ready-made framework for hydrographic modeling. Determining particular stream reaches or watersheds in poor ecological condition across large regions is an essential goal for monitoring and management. T...

  17. Synoptic channel morphodynamics with topo-bathymetric airborne lidar: promises, pitfalls and research needs

    NASA Astrophysics Data System (ADS)

    Lague, D.; Launeau, P.; Gouraud, E.

    2017-12-01

    Topo-bathymetric airborne lidar sensors using a green laser penetrating water and suitable for hydrography are now sold by major manufacturers. In the context of channel morphodynamics, repeat surveys could offer synoptic high resolution measurement of topo-bathymetric change, a key data that is currently missing. Yet, beyond the technological promise, what can we really achieve with these sensors in terms of depth penetration and bathymetric accuracy ? Can all rivers be surveyed ? How easy it is to process this new type of data to get the data needed by geomorphologists ? Here we report on the use of the Optech Titan dual wavelength (1064 nm & 532 nm) operated by the universities of Rennes and Nantes (France) and deployed over several rivers and lakes in France, including repeat surveys. We will illustrate cases where the topo-bathymetric survey is complete, reaching up to 6 m in rivers and offers unprecedented data for channel morphology analysis over tens of kilometres. We will also present challenging cases for which the technology will never work, or for which new algorithms to process full waveform are required. We will illustrate new developments for automated processing of large datasets, including the critical step of water surface detection and refraction correction. In suitable rivers, airborne topo-bathymetric surveys offer unprecedented synoptic 3D data at very high resolution (> 15 pts/m² in bathy) and precision (better than 10 cm for the bathy) down to 5-6 meters depth, with a perfectly continuous topography to bathymetry transition. This presentation will illustrate how this new type of data, when combined with 2D hydraulics modelling offers news insights into the spatial variations of friction in relation to channel bedforms, and the connectivity between rivers and floodplains.

  18. Planktic foraminiferal production stimulated by chlorophyll redistribution and entrainment of nutrients

    NASA Astrophysics Data System (ADS)

    Schiebel, Ralf; Waniek, Joanna; Bork, Matthias; Hemleben, Christoph

    2001-03-01

    During September and October 1996 planktic foraminifers and pteropods were sampled from the upper 2500 m of the water column in the BIOTRANS area (47°N, 20°W), eastern North Atlantic, as part of the JGOFS program. Hydrography, chlorophyll fluorescence, and nutrient content were recorded at high spatial and temporal resolution providing detailed information about the transition time between summer and fall. At the beginning of the cruise a shallow pycnocline was present and oligotrophic conditions prevailed. Over the course of the cruise, the mixed layer depth increased and surface water temperature decreased by 1.5°C. Both chlorophyll- a dispersed in the upper 50 m by vertical mixing and chlorophyll- a concentrations at the sea surface increased. The nitracline shoaled and nutrient enriched waters were entrained into the mixed layer. Planktic foraminifers and pteropods closely reflected the changes in the hydrography by increased growth rates and changes in species composition. Three main groups of planktic foraminiferal species were recognized: (1) a temperate and low-productivity group dominated by Neogloboquadrina incompta characterized the shallow mixed layer depths. (2) A temperate and high-productivity group dominated by Globigerina bulloides characterized the period with wind-induced dispersal of chlorophyll- a and entrainment of nutrient-enriched waters. (3) A warm water group containing Globigerinoides sacculifer, Orbulina universa, Globigerinoides ruber (white), and Globigerinella siphonifera was most common during the first days of sampling. Synchronous with the hydrographic change from summer to fall, planktic foraminiferal and pteropod growth was stimulated by redistribution of chlorophyll- a and entrainment of nutrient-enriched waters into the mixed layer. In addition, the seasonal change in the eastern North Atlantic resulted in a transition of the epipelagic faunal composition and an increased calcareous particle flux, which could be used to trace seasonality in fossil assemblages and allow for better paleoceanographic interpretation of the boreal Atlantic.

  19. Chemical and biological impacts of ocean acidification along the west coast of North America

    NASA Astrophysics Data System (ADS)

    Feely, Richard A.; Alin, Simone R.; Carter, Brendan; Bednaršek, Nina; Hales, Burke; Chan, Francis; Hill, Tessa M.; Gaylord, Brian; Sanford, Eric; Byrne, Robert H.; Sabine, Christopher L.; Greeley, Dana; Juranek, Lauren

    2016-12-01

    The continental shelf region off the west coast of North America is seasonally exposed to water with a low aragonite saturation state by coastal upwelling of CO2-rich waters. To date, the spatial and temporal distribution of anthropogenic CO2 (Canth) within the CO2-rich waters is largely unknown. Here we adapt the multiple linear regression approach to utilize the GO-SHIP Repeat Hydrography data from the northeast Pacific to establish an annually updated relationship between Canth and potential density. This relationship was then used with the NOAA Ocean Acidification Program West Coast Ocean Acidification (WCOA) cruise data sets from 2007, 2011, 2012, and 2013 to determine the spatial variations of Canth in the upwelled water. Our results show large spatial differences in Canth in surface waters along the coast, with the lowest values (37-55 μmol kg-1) in strong upwelling regions off southern Oregon and northern California and higher values (51-63 μmol kg-1) to the north and south of this region. Coastal dissolved inorganic carbon concentrations are also elevated due to a natural remineralized component (Cbio), which represents carbon accumulated through net respiration in the seawater that has not yet degassed to the atmosphere. Average surface Canth is almost twice the surface remineralized component. In contrast, Canth is only about one third and one fifth of the remineralized component at 50 m and 100 m depth, respectively. Uptake of Canth has caused the aragonite saturation horizon to shoal by approximately 30-50 m since the preindustrial period so that undersaturated waters are well within the regions of the continental shelf that affect the shell dissolution of living pteropods. Our data show that the most severe biological impacts occur in the nearshore waters, where corrosive waters are closest to the surface. Since the pre-industrial times, pteropod shell dissolution has, on average, increased approximately 19-26% in both nearshore and offshore waters.

  20. Hydrography of the Gulf of Maine and Massachusetts Bay, data report for R/V OCEANUS cruise 181, 5-15 February 1987

    USGS Publications Warehouse

    Moody, John A.; Butman, Bradford; Shoukimas, Polly; Donoghue, Terence G.

    1990-01-01

    During Cruise 181, a total of 95 hydrographic profiles were obtained by means of a conductivity-temperature-depth (CTD) profiler. Stations are numbered sequentially and station information is tabulated in table 1. The stations were arranged in ten transects (figure 1). Section 1 was across the Great South Channel and section 7 was across the Northeast Channel--the two main oceanic entrances and exits of the Gulf of Maine. Section 2 was along a saddle (Rodgers Pass) separating Wilkinson Basin from Georges Basin. Sections 3,5, and 10 were across different regions of Wilkinson Basin and all intersected at the longterm mooring site W1 in the center of Wilkinson Basin; section 8 was a dog-leg section through the southern portion of Jordan Basin; and sections 6 (east-west) and 9 (north-south) were within Georges Basin. A severe winter storm (see table 2 and 3) occurred between February 9 and 10 and work was stopped while the OCEANUS rode out the storm in Cape Cod Bay and repaired storm damage. Section 4 across Massachusetts Bay and section 5 across Wilkinson Basin, were repeated twice, once before the storm (sections 4a and 5a) and once after the storm (sections 4b and 5b).

  1. Distribution of black-tailed jackrabbit habitat determined by GIS in southwestern Idaho

    USGS Publications Warehouse

    Knick, Steven T.; Dyer, D.L.

    1997-01-01

    We developed a multivariate description of black-tailed jackrabbit (Lepus californicus) habitat associations from Geographical Information Systems (GIS) signatures surrounding known jackrabbit locations in the Snake River Birds of Prey National Conservation Area (NCA), in southwestern Idaho. Habitat associations were determined for characteristics within a 1-km radius (approx home range size) of jackrabbits sighted on night spotlight surveys conducted from 1987 through 1995. Predictive habitat variables were number of shrub, agriculture, and hydrography cells, mean and standard deviation of shrub patch size, habitat richness, and a measure of spatial heterogeneity. In winter, jackrabbits used smaller and less variable sizes of shrub patches and areas of higher spatial heterogeneity when compared to summer observations (P 0.05), differed significantly between high and low population phase. We used the Mahalanobis distance statistic to rank all 50-m cells in a 440,000-ha region relative to the multivariate mean habitat vector. On verification surveys to test predicted models, we sighted jackrabbits in areas ranked close to the mean habitat vector. Areas burned by large-scale fires between 1980 and 1992 or in an area repeatedly burned by military training activities had greater Mahalanobis distances from the mean habitat vector than unburned areas and were less likely to contain habitats used by jackrabbits.

  2. An environmental assessment of United States drinking water watersheds

    Treesearch

    James Wickham; Timothy Wade; Kurt Riitters

    2011-01-01

    Abstract There is an emerging recognition that natural lands and their conservation are important elements of a sustainable drinking water infrastructure. We conducted a national, watershed-level environmental assessment of 5,265 drinking water watersheds using data on land cover, hydrography and conservation status. Approximately 78% of the conterminous United States...

  3. Data Sources for the Analyses

    EPA Pesticide Factsheets

    Links are provided for the National Wetlands Inventory, National Hydrography Dataset, and the WorldClim-Global Climate Data source data websitesThis dataset is associated with the following publication:Lane , C., and E. D'Amico. Identification of Putative Geographically Isolated Wetlands of the Conterminous United States. JAWRA. American Water Resources Association, Middleburg, VA, USA, online, (2016).

  4. High performance computing to support multiscale representation of hydrography for the conterminous United States

    USGS Publications Warehouse

    Stanislawski, Larry V.; Liu, Yan; Buttenfield, Barbara P.; Survila, Kornelijus; Wendel, Jeffrey; Okok, Abdurraouf

    2016-01-01

    The National Hydrography Dataset (NHD) for the United States furnishes a comprehensive set of vector features representing the surface-waters in the country (U.S. Geological Survey 2000). The high-resolution (HR) layer of the NHD is largely comprised of hydrographic features originally derived from 1:24,000-scale (24K) U.S. Topographic maps. However, in recent years (2009 to present) densified hydrographic feature content, from sources as large as 1:2,400, have been incorporated into some watersheds of the HR NHD within the conterminous United States to better support the needs of various local and state organizations. As such, the HR NHD is a multiresolution dataset with obvious data density variations because of scale changes. In addition, data density variations exist within the HR NHD that are particularly evident in the surface-water flow network (NHD flowlines) because of natural variations of local geographic conditions; and also because of unintentional compilation inconsistencies due to variations in data collection standards and climate conditions over the many years of 24K hydrographic data collection (US Geological Survey 1955).

  5. Distribution of soft-bottom macrofauna in the deep open Baltic Sea in relation to environmental variability

    NASA Astrophysics Data System (ADS)

    Laine, Ari O.

    2003-05-01

    To analyse the large-scale distribution of soft-bottom macrofauna in the open Baltic Sea, samples for species abundance and biomass were collected in 1996-1997. Benthic community structure was used to classify and describe different assemblages and the observed distribution of communities was related to environmental factors. Distinct benthic assemblages were found that were dominated by only a few species ( Harmothoe sarsi, Saduria entomon, Monoporeia affinis, Pontoporeia femorata and Macoma balthica). These assemblages were related to different subareas and/or depth zones of the Baltic Sea. Salinity or the combined effects of salinity, dissolved oxygen and sediment organic matter content best explained the patterns in community distribution, indicating the importance of hydrography and sediment quality as structuring factors of the macrozoobenthos communities. When compared to long-term studies on Baltic macrozoobenthos it is evident that the results represent only a momentary state in the succession of the open-sea communities, which have been affected by past changes in hydrography, and will be subject to future changes in accordance with the variable environment, affected by climate.

  6. Recent observations in the straits of the East/Japan Sea: A review of hydrography, currents and volume transports

    NASA Astrophysics Data System (ADS)

    Na, Hanna; Isoda, Yutaka; Kim, Kuh; Kim, Young Ho; Lyu, Sang Jin

    2009-09-01

    Recent observations of hydrography, currents and volume transports in the straits of the East/Japan Sea are reviewed. It is newly found that bottom cold water in the Korea/Tsushima Strait originating from the northern region of the East/Japan Sea appears not only in summer and autumn but also in winter. Intensive observations in the Korea/Tsushima Strait revealed two distinct cores of northeastward currents in the upper layer of the western and eastern channels. Mean volume transport through the Korea/Tsushima Strait is calculated as 2.5 ± 0.5 Sv from four-year direct and indirect measurements. As continuous monitoring has started in the Tsugaru and Soya Straits, understanding of temporal variability of currents and volume transports through the straits is in progress. For the first time, simultaneous time series of volume transports are available in the Korea/Tsushima and Tsugaru Straits during the winter of 1999-2000. Ouflow through the Tsugaru Strait accounts for about 70% of inflow through the Korea/Tsushima Strait for this period.

  7. A logistic regression equation for estimating the probability of a stream in Vermont having intermittent flow

    USGS Publications Warehouse

    Olson, Scott A.; Brouillette, Michael C.

    2006-01-01

    A logistic regression equation was developed for estimating the probability of a stream flowing intermittently at unregulated, rural stream sites in Vermont. These determinations can be used for a wide variety of regulatory and planning efforts at the Federal, State, regional, county and town levels, including such applications as assessing fish and wildlife habitats, wetlands classifications, recreational opportunities, water-supply potential, waste-assimilation capacities, and sediment transport. The equation will be used to create a derived product for the Vermont Hydrography Dataset having the streamflow characteristic of 'intermittent' or 'perennial.' The Vermont Hydrography Dataset is Vermont's implementation of the National Hydrography Dataset and was created at a scale of 1:5,000 based on statewide digital orthophotos. The equation was developed by relating field-verified perennial or intermittent status of a stream site during normal summer low-streamflow conditions in the summer of 2005 to selected basin characteristics of naturally flowing streams in Vermont. The database used to develop the equation included 682 stream sites with drainage areas ranging from 0.05 to 5.0 square miles. When the 682 sites were observed, 126 were intermittent (had no flow at the time of the observation) and 556 were perennial (had flowing water at the time of the observation). The results of the logistic regression analysis indicate that the probability of a stream having intermittent flow in Vermont is a function of drainage area, elevation of the site, the ratio of basin relief to basin perimeter, and the areal percentage of well- and moderately well-drained soils in the basin. Using a probability cutpoint (a lower probability indicates the site has perennial flow and a higher probability indicates the site has intermittent flow) of 0.5, the logistic regression equation correctly predicted the perennial or intermittent status of 116 test sites 85 percent of the time.

  8. TRAP: automated classification, quantification and annotation of tandemly repeated sequences.

    PubMed

    Sobreira, Tiago José P; Durham, Alan M; Gruber, Arthur

    2006-02-01

    TRAP, the Tandem Repeats Analysis Program, is a Perl program that provides a unified set of analyses for the selection, classification, quantification and automated annotation of tandemly repeated sequences. TRAP uses the results of the Tandem Repeats Finder program to perform a global analysis of the satellite content of DNA sequences, permitting researchers to easily assess the tandem repeat content for both individual sequences and whole genomes. The results can be generated in convenient formats such as HTML and comma-separated values. TRAP can also be used to automatically generate annotation data in the format of feature table and GFF files.

  9. Evaluation of alternative programs for repeat DWI offenders

    DOT National Transportation Integrated Search

    1996-10-01

    This report documents the results of a study to determine the effectiveness of two alternative sanctions programs for repeat DWIs. The programs were an Intensive Supervision Probation (ISP) program in Milwaukee County, Wisconsin, and an Electronic Mo...

  10. The National Map - Hydrography

    USGS Publications Warehouse

    ,

    2002-01-01

    Governments depend on a common set of base geographic information as a tool for economic and community development, land and natural resource management, and health and safety services. Emergency management and homeland security applications rely on this information. Private industry, nongovernmental organizations, and individual citizens use the same geographic data. Geographic information underpins an increasingly large part of the Nation's economy.

  11. The National Map product and services directory

    USGS Publications Warehouse

    Newell, Mark R.

    2008-01-01

    As one of the cornerstones of the U.S. Geological Survey's (USGS) National Geospatial Program (NGP), The National Map is a collaborative effort among the USGS and other Federal, state, and local partners to improve and deliver topographic information for the Nation. It has many uses ranging from recreation to scientific analysis to emergency response. The National Map is easily accessible for display on the Web, as products, and as downloadable data. The geographic information available from The National Map includes orthoimagery (aerial photographs), elevation, geographic names, hydrography, boundaries, transportation, structures, and land cover. Other types of geographic information can be added to create specific types of maps. Of major importance, The National Map currently is being transformed to better serve the geospatial community. The USGS National Geospatial Program Office (NGPO) was established to provide leadership for placing geographic knowledge at the fingertips of the Nation. The office supports The National Map, Geospatial One-Stop (GOS), National Atlas of the United States®, and the Federal Geographic Data Committee (FGDC). This integrated portfolio of geospatial information and data supports the essential components of delivering the National Spatial Data Infrastructure (NSDI) and capitalizing on the power of place.

  12. SSRscanner: a program for reporting distribution and exact location of simple sequence repeats.

    PubMed

    Anwar, Tamanna; Khan, Asad U

    2006-02-20

    Simple sequence repeats (SSRs) have become important molecular markers for a broad range of applications, such as genome mapping and characterization, phenotype mapping, marker assisted selection of crop plants and a range of molecular ecology and diversity studies. These repeated DNA sequences are found in both prokaryotes and eukaryotes. They are distributed almost at random throughout the genome, ranging from mononucleotide to trinucleotide repeats. They are also found at longer lengths (> 6 repeating units) of tracts. Most of the computer programs that find SSRs do not report its exact position. A computer program SSRscanner was written to find out distribution, frequency and exact location of each SSR in the genome. SSRscanner is user friendly. It can search repeats of any length and produce outputs with their exact position on chromosome and their frequency of occurrence in the sequence. This program has been written in PERL and is freely available for non-commercial users by request from the authors. Please contact the authors by E-mail: huzzi99@hotmail.com.

  13. Southwest Region Threatened, Endangered, and At-Risk Species Workshop: Managing Within Highly Variable Environments Hydrology and Ecology of Intermittent Stream and Dry Wash Ecosystems

    EPA Science Inventory

    Ephemeral (dry washes) and intermittent streams make up approximately 59% of all streams in the U.S. (excluding Alaska), and over 81% in the arid and semi-arid Southwest (Arizona, New Mexico, Nevada, Utah, Colorado and California) according to the National Hydrography Dataset. T...

  14. Analyzing legacy U.S. Geological Survey geochemical databases using GIS: applications for a national mineral resource assessment

    USGS Publications Warehouse

    Yager, Douglas B.; Hofstra, Albert H.; Granitto, Matthew

    2012-01-01

    This report emphasizes geographic information system analysis and the display of data stored in the legacy U.S. Geological Survey National Geochemical Database for use in mineral resource investigations. Geochemical analyses of soils, stream sediments, and rocks that are archived in the National Geochemical Database provide an extensive data source for investigating geochemical anomalies. A study area in the Egan Range of east-central Nevada was used to develop a geographic information system analysis methodology for two different geochemical datasets involving detailed (Bureau of Land Management Wilderness) and reconnaissance-scale (National Uranium Resource Evaluation) investigations. ArcGIS was used to analyze and thematically map geochemical information at point locations. Watershed-boundary datasets served as a geographic reference to relate potentially anomalous sample sites with hydrologic unit codes at varying scales. The National Hydrography Dataset was analyzed with Hydrography Event Management and ArcGIS Utility Network Analyst tools to delineate potential sediment-sample provenance along a stream network. These tools can be used to track potential upstream-sediment-contributing areas to a sample site. This methodology identifies geochemically anomalous sample sites, watersheds, and streams that could help focus mineral resource investigations in the field.

  15. Land use and land cover digital data from 1:250,000- and 1:100,000- scale maps

    USGS Publications Warehouse

    ,

    1990-01-01

    The Earth Science Information Centers (ESIC) distribute digital cartographic/geographic data files produced by the U.S. Geological Survey (USGS) as part of the National Mapping Program. The data files are grouped into four basic types. The first type, called a Digital Line Graph (DLG), is line map information in digital form. These data files include information on planimetric base categories, such as transportation, hydrography, and boundaries. The second type, called a Digital Elevation Model (DEM), consists of a sampled array of elevations for ground positions that are usually at regularly spaced intervals. The third type, Land Use and Land Cover digital data, provide information on nine major classes of land use such as urban, agricultural, or forest as well as associated map data such as political units and Federal land ownership. The fourth type, the Geographic Names Information System, provides primary information for known places, features, and areas in the United States identified by a proper name.

  16. Digital Elevation Models

    USGS Publications Warehouse

    ,

    1993-01-01

    The Earth Science Information Center (ESIC) distributes digital cartographic/geographic data files produced by the U.S. Geological Survey (USGS) as part of the National Mapping Program. Digital cartographic data files may be grouped into four basic types. The first of these, called a Digital Line Graph (DLG), is the line map information in digital form. These data files include information on base data categories, such as transportation, hypsography, hydrography, and boundaries. The second type, called a Digital Elevation Model (DEM), consists of a sampled array of elevations for a number of ground positions at regularly spaced intervals. The third type is Land Use and Land Cover digital data which provides information on nine major classes of land use such as urban, agricultural, or forest as well as associated map data such as political units and Federal land ownership. The fourth type, the Geographic Names Information System, provides primary information for all known places, features, and areas in the United States identified by a proper name.

  17. Digital line graphs from 1:24,000-scale maps

    USGS Publications Warehouse

    ,

    1990-01-01

    The Earth Science Information Centers (ESIC) distribute digital cartographic/geographic data files produced by the U.S. Geological Survey (USGS) as part of the National Mapping Program. Digital cartographic data flles are grouped into four basic types. The first of these, called a Digital Line . Graph (DLG), is line map information in digital form. These data files include information on planimetric base categories, such as transportation, hydrography, and boundaries. The second type, called a Digital Elevation Model (DEM), consists of a sampled array of elevations for a number of ground positions that are usually at regularly spaced intervals. The third type is Land Use and Land Cover digital data, which provides information on nine major classes of land use such as urban, agricultural, or forest as wen as associated map data such as political units and Federal land ownership. The fourth type, the Geographic Names Information System, provides primary information for all known places, features, and areas in the United States identified by a proper name.

  18. Digital line graphs from 1:100,000-scale maps

    USGS Publications Warehouse

    ,

    1989-01-01

    The National Cartographic Information Center (NCIC) distributes digital cartographic/geographic data files produced by the U.S. Geological Survey (USGS) as part of the National Mapping Program. Digital cartographic data files may be grouped into four basic types. The first of these, called a Digital Line Graph (DLG), is line map information in digital form. These data files include information on planimetric base categories, such as transportation, hydrography, and boundaries. The second form, called a Digital Elevation Model (OEM), consists of a sampled array of elevations for ground positions that are usually, but not always, at regularly spaced intervals. The third type is Land Use and Land Cover digital data, which provides information on nine major classes of land use such as urban, agricultural, or forest as well as associated map data such as political units and Federal land ownership. The fourth type, the Geographic Names Information System, provides primary information for known places, features, and areas in the United States identified by a proper name.

  19. An open source high-performance solution to extract surface water drainage networks from diverse terrain conditions

    USGS Publications Warehouse

    Stanislawski, Larry V.; Survila, Kornelijus; Wendel, Jeffrey; Liu, Yan; Buttenfield, Barbara P.

    2018-01-01

    This paper describes a workflow for automating the extraction of elevation-derived stream lines using open source tools with parallel computing support and testing the effectiveness of procedures in various terrain conditions within the conterminous United States. Drainage networks are extracted from the US Geological Survey 1/3 arc-second 3D Elevation Program elevation data having a nominal cell size of 10 m. This research demonstrates the utility of open source tools with parallel computing support for extracting connected drainage network patterns and handling depressions in 30 subbasins distributed across humid, dry, and transitional climate regions and in terrain conditions exhibiting a range of slopes. Special attention is given to low-slope terrain, where network connectivity is preserved by generating synthetic stream channels through lake and waterbody polygons. Conflation analysis compares the extracted streams with a 1:24,000-scale National Hydrography Dataset flowline network and shows that similarities are greatest for second- and higher-order tributaries.

  20. SSRscanner: a program for reporting distribution and exact location of simple sequence repeats

    PubMed Central

    Anwar, Tamanna; Khan, Asad U

    2006-01-01

    Simple sequence repeats (SSRs) have become important molecular markers for a broad range of applications, such as genome mapping and characterization, phenotype mapping, marker assisted selection of crop plants and a range of molecular ecology and diversity studies. These repeated DNA sequences are found in both prokaryotes and eukaryotes. They are distributed almost at random throughout the genome, ranging from mononucleotide to trinucleotide repeats. They are also found at longer lengths (> 6 repeating units) of tracts. Most of the computer programs that find SSRs do not report its exact position. A computer program SSRscanner was written to find out distribution, frequency and exact location of each SSR in the genome. SSRscanner is user friendly. It can search repeats of any length and produce outputs with their exact position on chromosome and their frequency of occurrence in the sequence. Availability This program has been written in PERL and is freely available for non-commercial users by request from the authors. Please contact the authors by E-mail: huzzi99@hotmail.com PMID:17597863

  1. Environmental Characterization of Mine Countermeasure Test Ranges: Hydrography and Water Column Optics

    DTIC Science & Technology

    2015-09-30

    changes in near-shore water columns and support companion laser imaging system tests. The physical, biological and optical oceanographic data...developed under this project will be used as input to optical and environmental models to assess the performance characteristics of laser imaging systems...OBJECTIVES We proposed to characterize the physical, biological and optical fields present during deployments of the Streak Tube Imaging Lidar

  2. The transition from winter to early spring in the eastern Weddell Sea, Antarctica: Plankton biomass and composition in relation to hydrography and nutrients

    NASA Astrophysics Data System (ADS)

    Scharek, Renate; Smetacek, Victor; Fahrbach, Eberhard; Gordon, Louis I.; Rohardt, Gerd; Moore, Stanley

    1994-08-01

    Hydrography and nutrient distribution in relation to plankton biomass and composition were studied during two transects (October and December) that crossed the ice-covered eastern Weddell Sea (approximately along the Greenwich Meridian) from the ice edge at 58°S to the continental margin at 70°30'S in 1986. Whereas the winter situation still prevailed under the intact ice cover during the October transect, extensive melting was underway by December. Despite the very low levels of plankton biomass encountered under sea ice in late winter (as low at 0.02 μg chlorophyll α 1 -1), distinct differences, particularly in diatom abundance and species composition, were present between the northern, eastward-flowing and southern, westward-flowing limbs of the Weddell Gyre. On the basis of species composition and physiological state of diatom assemblages, the higher biomass of the northern limb is attributed to entrainment of plankton-rich water from the ice-free Circumpolar Current rather than to in situ growth. The pelagic community characteristic of the region under the pack ice throughout the study was dominated by nanoflagellates, ciliates and heterotrophic dinoflagellates. Biomass of the latter groups ranged between 12 and 119% of that of autotrophs, and microscopic observations suggested that grazing pressure was heavy. This winter and early spring community resembled the regenerating communities of nutrient-limited waters. Break-up and melt of the ice cover in early December occurred simultaneously over an extensive area yet did not elicit biomass build-up, not even at the northern ice edge where favorable growth conditions appeared to prevail. Apparently most of the diatoms sinking into the water from the rich stocks developing in melting ice are grazed by protozoa and krill, hence do not contribute to water column blooms in this region. This situation contrasts with those reported from the western Weddell and Ross Sea ice edges where blooms of ice diatoms were observed in sharply defined melt-water zones adjoining closed ice pack. The role of melting sea ice in initiating blooms will hence differ in accordance with regional hydrography.

  3. Programmable, reversible and repeatable wrinkling of shape memory polymer thin films on elastomeric substrates for smart adhesion.

    PubMed

    Wang, Yu; Xiao, Jianliang

    2017-08-09

    Programmable, reversible and repeatable wrinkling of shape memory polymer (SMP) thin films on elastomeric polydimethylsiloxane (PDMS) substrates is realized, by utilizing the heat responsive shape memory effect of SMPs. The dependencies of wrinkle wavelength and amplitude on program strain and SMP film thickness are shown to agree with the established nonlinear buckling theory. The wrinkling is reversible, as the wrinkled SMP thin film can be recovered to the flat state by heating up the bilayer system. The programming cycle between wrinkle and flat is repeatable, and different program strains can be used in different programming cycles to induce different surface morphologies. Enabled by the programmable, reversible and repeatable SMP film wrinkling on PDMS, smart, programmable surface adhesion with large tuning range is demonstrated.

  4. Observation-based estimate of the Fukushima radionuclide in the North Pacific

    NASA Astrophysics Data System (ADS)

    Yoshida, Sachiko; Jayne, Steven; Macdonald, Alison; Buesseler, Ken; Rypina, Irina

    2014-05-01

    Contaminated waters from Fukushima nuclear power plant (FNPP) were discharged directly into the North Pacific Ocean in March 2011. Coastal current system in this region and time scale of the water exchange with the open ocean is not well understood, however both observational evidence and numerical model simulation results indicate relatively rapid advection of contaminants eastward into the highly energetic mixed water region in the confluence of the Kuroshio and Oyashio. Surface drifters deployed near the FNPP in early summer 2011 show trajectories crossing the North Pacific generally following the large scale ocean circulation after one year. Previously obtained cesium (Cs) samples from multiple cruises near FNPP and off shore region between 2011 and 2013 are collected and evaluated to diagnose the propagating Cs signal crossing North Pacific Ocean. In this presentation, we use radionuclides of Fukushima origin as a tracer to understand the North Pacific circulation and mixing process after two years of release. Large numbers of the observation are repeatedly took place near shore where Cs shows still relatively higher about 10-30 Bq/m3 in 2013. Temperature-salinity (T-S) properties for the available hydrographic data indicate that the majority of the samples were obtained in the region where the water is highly influenced by the warm-salty Kuroshio origin water. Depth profiles of 35N section in March-May 2013 cruise of the U.S. Climate Variability and Predictability and Carbon (CLIVAR) repeat Hydrography sections are examined to track the radionuclide penetration into the subsurface ocean and the subduction pathways along isopycnal surfaces. Available large drifter datasets that accumulated over decades of field work can guide us in estimating the spread of these radionuclides. By applying an innovative statistical analysis to the drifter data, we investigate the spreading of radionuclides in the Pacific Ocean over 5-year time scales.

  5. Helicopter noise measurements repeatability program final report

    DOT National Transportation Integrated Search

    1987-09-01

    This report summarizes the findings of the Helicopter Noise Measurement Repeatability Program (HNMRP), which was initiated by the International Civil Aviation Organization (ICAO) Committee on Aviation Environmental Protection (CAEP) Working Group II ...

  6. Bio-Optical and Geochemical Properties of the South Atlantic Subtropical Gyre

    NASA Technical Reports Server (NTRS)

    Signorini, S. R.; Hooker, Stanford B.; McClain, Charles R.

    2003-01-01

    An investigation of the bio-optical properties of the South Atlantic subtropical gyre (SASG) was conducted using data primarily from the UK Atlantic Meridional Transect (AMT) program and SeaWiFS. The AMT cruises extend from the UK to the Falklands Islands (sailing on the RRS James Clark Ross) with the purpose of improving our knowledge of surface layer hydrography, biogeochemical processes, ecosystem dynamics and food webs across basin scales in the Atlantic Ocean. Two objectives of the AMT program relevant to this study are the characterization of biogeochemical provinces and the analysis of optical and pigment parameters in connection with remote sensing ocean color data. The primary focus of this NASA Technical Memorandum is on the variability of the vertical distribution of phytoplankton pigments and associated absorption properties across the SASG, and their relevance to remote sensing algorithms. Therefore, a subset of the AMT data within the SASG from all available cruises was used in the analyses. One of the challenges addressed here is the determination of the SASG geographic boundaries. One of the major problems is to reconcile the properties of biogeochemical provinces. We use water mass analysis, dynamics of ocean currents, and meridional gradients of bio-optical properties, to identify the SASG boundaries.

  7. Estuarine-Shelf Interactions,

    DTIC Science & Technology

    1986-01-01

    latter process occurs at the mouth of the Magothy strength of the flow rather than being specified a River, an estuary tributary to Chesapeake Bay...periods. It is also clear, Magothy in the immediate past. As the density though, that significant geographical variability front associated with the...Estuarine Coastal chemical hydrography of the Magothy River, ?tar. Sci., ’)(4), 485-496, 1977. Tech. Rep. XVIR, Ref. 59-2, Chesapeake bay Hachey, H. B

  8. Cleaning Up the Joint: Command, Control, and Agency in American War Fighting

    DTIC Science & Technology

    2012-01-01

    markers of the rise of professionalism . Constabulary duties on the frontier provided no compelling intellectual locus on which to build a theory of war...Docks; Construction , Equipment and Repairs; Provisions and Clothing; Ordnance and Hydrography; and Medicine and Surgery.80 Its professionalism , however...advisors seem to have convinced themselves otherwise, forcible regime change is by definition a nation- building project of the highest order.67 When

  9. Joint Sensing/Sampling Optimization for Surface Drifting Mine Detection with High-Resolution Drift Model

    DTIC Science & Technology

    2012-09-01

    as potential tools for large area detection coverage while being moderately inexpensive (Wettergren, Performance of Search via Track - Before - Detect for...via Track - Before - Detect for Distribute 34 Sensor Networks, 2008). These statements highlight three specific needs to further sensor network research...Bay hydrography. Journal of Marine Systems, 12, 221–236. Wettergren, T. A. (2008). Performance of search via track - before - detect for distributed

  10. High-efficient Extraction of Drainage Networks from Digital Elevation Model Data Constrained by Enhanced Flow Enforcement from Known River Map

    NASA Astrophysics Data System (ADS)

    Wu, T.; Li, T.; Li, J.; Wang, G.

    2017-12-01

    Improved drainage network extraction can be achieved by flow enforcement whereby information of known river maps is imposed to the flow-path modeling process. However, the common elevation-based stream burning method can sometimes cause unintended topological errors and misinterpret the overall drainage pattern. We presented an enhanced flow enforcement method to facilitate accurate and efficient process of drainage network extraction. Both the topology of the mapped hydrography and the initial landscape of the DEM are well preserved and fully utilized in the proposed method. An improved stream rasterization is achieved here, yielding continuous, unambiguous and stream-collision-free raster equivalent of stream vectors for flow enforcement. By imposing priority-based enforcement with a complementary flow direction enhancement procedure, the drainage patterns of the mapped hydrography are fully represented in the derived results. The proposed method was tested over the Rogue River Basin, using DEMs with various resolutions. As indicated by the visual and statistical analyses, the proposed method has three major advantages: (1) it significantly reduces the occurrences of topological errors, yielding very accurate watershed partition and channel delineation, (2) it ensures scale-consistent performance at DEMs of various resolutions, and (3) the entire extraction process is well-designed to achieve great computational efficiency.

  11. National Hydrography Dataset Plus (NHDPlus)

    EPA Pesticide Factsheets

    The NHDPlus Version 1.0 is an integrated suite of application-ready geospatial data sets that incorporate many of the best features of the National Hydrography Dataset (NHD) and the National Elevation Dataset (NED). The NHDPlus includes a stream network (based on the 1:100,000-scale NHD), improved networking, naming, and value-added attributes (VAA's). NHDPlus also includes elevation-derived catchments (drainage areas) produced using a drainageenforcement technique first broadly applied in New England, and thus dubbed The New-England Method. This technique involves burning-in the 1:100,000-scale NHD and when available building walls using the national WatershedBoundary Dataset (WBD). The resulting modified digital elevation model(HydroDEM) is used to produce hydrologic derivatives that agree with the NHDand WBD. An interdisciplinary team from the U. S. Geological Survey (USGS), U.S. Environmental Protection Agency (USEPA), and contractors, over the lasttwo years has found this method to produce the best quality NHD catchments using an automated process.The VAAs include greatly enhanced capabilities for upstream and downstream navigation, analysis and modeling. Examples include: retrieve all flowlines (predominantly confluence-to-confluence stream segments) and catchments upstream of a given flowline using queries rather than by slower flowline-by flowline navigation; retrieve flowlines by stream order; subset a stream level path sorted in hydrologic order for st

  12. Airborne Laser Hydrography II

    NASA Astrophysics Data System (ADS)

    Philpot, W.; Wozencraft, J.

    2016-02-01

    In 1985, Dr. Gary Guenther assembled the text, "Airborne Laser Hydrography" which quickly became a heavily used manual and guide for any and all scientists and engineers involved with airborne lidar bathymetry (ALB). It was a remarkable book that captured a snapshot of the state of the art of ALB and included historical developments, theoretical and modeling efforts as well as design characteristics and constraints, ending with accuracy assessment and a discussion of design tradeoffs. Known familiarly as the "Blue Book" it served the community remarkably well for many years. At 30 years of age, it is still a valued reference, but unavoidably dated in a field that has developed rapidly and nonstop over the intervening years. It is time for an update. The new text is attempt by the ALB community to update and expand upon Guenther's text. Like the original, Blue Book II reviews the historical developments in ALB, extending them into the 21st century, considers basic environmental water optical properties, theoretical developments, data processing and performance evaluation. All have progressed dramatically in the past 30 years. This paper presents an outline of the new book, a description of the contents, with emphasis on the theoretical models of the lidar waveform and its propagation through, and interaction with the water.

  13. Repeat GED[R] Tests Examinees: Who Persists and Who Passes? GED Testing Service [R]Research Studies, 2010-2

    ERIC Educational Resources Information Center

    Zhang, Jizhi; Patterson, Margaret Becker

    2010-01-01

    Like most high-stakes testing programs, the GED[R] testing program allows examinees who do not pass on the first attempt to retake the GED Tests. Studies and reports have described GED Tests candidates' characteristics and testing performance, but no study has targeted repeat examinees. A series of questions related to repeat examinees remains…

  14. Proceedings of the Fourth Laser Hydrography Symposium 30 September - 3 October 1980 at Defence Research Centre, Salisbury, South Australia and Royal Australian Navy Hydrographic Office, North Sydney, New South Wales

    DTIC Science & Technology

    1981-03-01

    is required. This may be fabricated as an optical rotator, a further lenticular waveplate or a simple glass lens. Since one now has a pair of lenses it...may not be a problem as the mathematical model does not take into account the astigmatic behaviour of both rod and waveplate. Since the possibility

  15. Elsevier's maritime dictionary

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bakr, M.

    1987-01-01

    This is a dictionary for terms relating to maritime activities, and provides the terminology in three international languages. It also provides maritime terminology in Arabic. The dictionary covers the most recent terms used in satellite navigation and telecommunication. Its other topics include: acoustics, insurance, containers, cargo, bulk chemicals, carriage of dangerous goods, chemistry, radiocommunication, economics, electricity, environment, finance, fire protection, fishing vessels, hydrography, legal matters, meteorology, navigation, optics, pollution, radars, satellites, shipbuilding, stability, mechanics, and life-saving appliances.

  16. Performance analysis of wideband data and television channels. [space shuttle communications

    NASA Technical Reports Server (NTRS)

    Geist, J. M.

    1975-01-01

    Several aspects are discussed of space shuttle communications, including the return link (shuttle-to-ground) relayed through a satellite repeater (TDRS). The repeater exhibits nonlinear amplification and an amplitude-dependent phase shift. Models were developed for various link configurations, and computer simulation programs based on these models are described. Certain analytical results on system performance were also obtained. For the system parameters assumed, the results indicate approximately 1 db degradation relative to a link employing a linear repeater. While this degradation is dependent upon the repeater, filter bandwidths, and modulation parameters used, the programs can accommodate changes to any of these quantities. Thus the programs can be applied to determine the performance with any given set of parameters, or used as an aid in link design.

  17. CHAMBARA: The changing hydrography and man made biomass burning in Africa: a concept for earth observations from the International Space Station.

    NASA Astrophysics Data System (ADS)

    Muller, Christian

    2010-05-01

    In parallel to vegetation mapping exemplified by VEGETATION and spectral thematic instruments as MERIS, other important natural and man-made phenomena characterize the equatorial and low latitude regions region covered especially well by the International Space Station orbit. The agreement between the space agencies evolves now to a lifetime of the ISS up to 2025. Two themes can be proposed: hydrography and biomass burning. Hydrography has an extreme human importance as human life and agriculture depend on water, transport as well; also the hydroelectric energy which could be harnessed from the hydrological network is tremendous and would allow a sustainable development of the entire region. The CHAMBARA proposed concept differs from other satellite observation programmes in a sense that the images are taken either according either to pre-planned scientific campaigns controlled from an operation centre either according to real time unexpected events or emergencies. For example, biomass burning imaging campaigns are organised at the end of the dry season, while deltas and lake are monitored at specific points of the dry seasons and, if the cloud cover allows it, at periods of the wet season. In exceptional cases, as natural disasters or rapidly varying scenes, the operation centre will reschedule the programme and even ask for exceptional crew assistance. This project aims at this point to the European and African scientific communities specialized on Sub-Saharan Africa which is currently studied by several Belgian scientific institutions but its techniques could also be extended to the Amazon basin, tropical Asia and Oceania. The equipment proposed will be an advanced true colour rapid camera, external mounting is wished in order to free the optical window but nadir pointing should be the nominal position. An example of the concept is given by the serendipitous image ISS004E11 Central African observation (ISS photograph, May 16, 2002, centered near 8.6 degrees south latitude, 27.4 degrees east longitude, NASA document). This image is a unique representation of the start of a slash and burn process on several agricultural plots, it exemplifies the requirement for a rapid camera able to follow the evolution of plumes and other variable earth surface phenomena. This communication describes the integrated concept proposed from image collecting operations to data distribution.

  18. ICAO helicopter noise measurement repeatability program : U.S. test report, Bell 206L-1, noise measurement flight test

    DOT National Transportation Integrated Search

    1985-09-30

    This document reports the findings of the U.S. test team's participation in the Helicopter Noise Measurement Repeatability Program (HNMRP) conducted under the direction of the International Civil Aviation Organization's (ICAO) Committee on Aviation E...

  19. detectIR: a novel program for detecting perfect and imperfect inverted repeats using complex numbers and vector calculation.

    PubMed

    Ye, Congting; Ji, Guoli; Li, Lei; Liang, Chun

    2014-01-01

    Inverted repeats are present in abundance in both prokaryotic and eukaryotic genomes and can form DNA secondary structures--hairpins and cruciforms that are involved in many important biological processes. Bioinformatics tools for efficient and accurate detection of inverted repeats are desirable, because existing tools are often less accurate and time consuming, sometimes incapable of dealing with genome-scale input data. Here, we present a MATLAB-based program called detectIR for the perfect and imperfect inverted repeat detection that utilizes complex numbers and vector calculation and allows genome-scale data inputs. A novel algorithm is adopted in detectIR to convert the conventional sequence string comparison in inverted repeat detection into vector calculation of complex numbers, allowing non-complementary pairs (mismatches) in the pairing stem and a non-palindromic spacer (loop or gaps) in the middle of inverted repeats. Compared with existing popular tools, our program performs with significantly higher accuracy and efficiency. Using genome sequence data from HIV-1, Arabidopsis thaliana, Homo sapiens and Zea mays for comparison, detectIR can find lots of inverted repeats missed by existing tools whose outputs often contain many invalid cases. detectIR is open source and its source code is freely available at: https://sourceforge.net/projects/detectir.

  20. The Time-domain Spectroscopic Survey: Target Selection for Repeat Spectroscopy

    NASA Astrophysics Data System (ADS)

    MacLeod, Chelsea L.; Green, Paul J.; Anderson, Scott F.; Eracleous, Michael; Ruan, John J.; Runnoe, Jessie; Nielsen Brandt, William; Badenes, Carles; Greene, Jenny; Morganson, Eric; Schmidt, Sarah J.; Schwope, Axel; Shen, Yue; Amaro, Rachael; Lebleu, Amy; Filiz Ak, Nurten; Grier, Catherine J.; Hoover, Daniel; McGraw, Sean M.; Dawson, Kyle; Hall, Patrick B.; Hawley, Suzanne L.; Mariappan, Vivek; Myers, Adam D.; Pâris, Isabelle; Schneider, Donald P.; Stassun, Keivan G.; Bershady, Matthew A.; Blanton, Michael R.; Seo, Hee-Jong; Tinker, Jeremy; Fernández-Trincado, J. G.; Chambers, Kenneth; Kaiser, Nick; Kudritzki, R.-P.; Magnier, Eugene; Metcalfe, Nigel; Waters, Chris Z.

    2018-01-01

    As astronomers increasingly exploit the information available in the time domain, spectroscopic variability in particular opens broad new channels of investigation. Here we describe the selection algorithms for all targets intended for repeat spectroscopy in the Time Domain Spectroscopic Survey (TDSS), part of the extended Baryon Oscillation Spectroscopic Survey within the Sloan Digital Sky Survey (SDSS)-IV. Also discussed are the scientific rationale and technical constraints leading to these target selections. The TDSS includes a large “repeat quasar spectroscopy” (RQS) program delivering ∼13,000 repeat spectra of confirmed SDSS quasars, and several smaller “few-epoch spectroscopy” (FES) programs targeting specific classes of quasars as well as stars. The RQS program aims to provide a large and diverse quasar data set for studying variations in quasar spectra on timescales of years, a comparison sample for the FES quasar programs, and an opportunity for discovering rare, serendipitous events. The FES programs cover a wide variety of phenomena in both quasars and stars. Quasar FES programs target broad absorption line quasars, high signal-to-noise ratio normal broad line quasars, quasars with double-peaked or very asymmetric broad emission line profiles, binary supermassive black hole candidates, and the most photometrically variable quasars. Strongly variable stars are also targeted for repeat spectroscopy, encompassing many types of eclipsing binary systems, and classical pulsators like RR Lyrae. Other stellar FES programs allow spectroscopic variability studies of active ultracool dwarf stars, dwarf carbon stars, and white dwarf/M dwarf spectroscopic binaries. We present example TDSS spectra and describe anticipated sample sizes and results.

  1. GRACE gravity model: assssment in terms of deep ocean currents from hydrography and from the ECCO ocean model

    NASA Technical Reports Server (NTRS)

    Zlotnicki, V.; Stammer, D.; Fukumori, I.

    2003-01-01

    Here we assess the new generation of gravity models, derived from GRACE data. The differences between a global geoid model (one from GRACE data and one the well-known EGM-96), minus a Mean Sea Surface derived from over a decade of altimetric data are compared to hydrographic data from the Levitus compilation and to the ECCO numerical ocean model, which assimilates altimetry and other data.

  2. Observations and Modeling of Upper Ocean Hydrography in the Western Arctic With Implications for Acoustic Propagation

    DTIC Science & Technology

    2016-12-01

    2016 Dissertation Supervisors: Wieslaw Maslowski John Colosi THIS PAGE INTENTIONALLY LEFT BLANK i REPORT DOCUMENTATION PAGE Form Approved...level is 4% of the standard GM value. Frequency spectra of spice show a form similar to the internal-wave spectra but with a steeper spectral slope...Standard Form 298 (Rev. 2-89) Prescribed by ANSI Std. 239-18 ii THIS PAGE INTENTIONALLY LEFT BLANK iii Approved for public release

  3. Distribution and Taxonomy of Zooplankton in the Alboran Sea and Adjacent Western Mediterranean: A Literature Survey and Field Guide

    DTIC Science & Technology

    1991-09-01

    Distribution List for Technical Report Exchange I Attn: Stella Sanchez-Wade Pell Marine Science Library Documents Section University of Rhode IslandU...partly on the geographic distribution of marine laboratories on the coasts of these seas. Upwelling regions near Messina, Naples and Nice in the...into three main sections . The first considers gjneral patterns of zooplankton distribution. This is intended as an overview of hydrography, zooplankton

  4. Feature pruning by upstream drainage area to support automated generalization of the United States National Hydrography Dataset

    USGS Publications Warehouse

    Stanislawski, L.V.

    2009-01-01

    The United States Geological Survey has been researching generalization approaches to enable multiple-scale display and delivery of geographic data. This paper presents automated methods to prune network and polygon features of the United States high-resolution National Hydrography Dataset (NHD) to lower resolutions. Feature-pruning rules, data enrichment, and partitioning are derived from knowledge of surface water, the NHD model, and associated feature specification standards. Relative prominence of network features is estimated from upstream drainage area (UDA). Network and polygon features are pruned by UDA and NHD reach code to achieve a drainage density appropriate for any less detailed map scale. Data partitioning maintains local drainage density variations that characterize the terrain. For demonstration, a 48 subbasin area of 1:24 000-scale NHD was pruned to 1:100 000-scale (100 K) and compared to a benchmark, the 100 K NHD. The coefficient of line correspondence (CLC) is used to evaluate how well pruned network features match the benchmark network. CLC values of 0.82 and 0.77 result from pruning with and without partitioning, respectively. The number of polygons that remain after pruning is about seven times that of the benchmark, but the area covered by the polygons that remain after pruning is only about 10% greater than the area covered by benchmark polygons. ?? 2009.

  5. The USGS role in mapping the nation's submerged lands

    USGS Publications Warehouse

    Schwab, Bill; Haines, John

    2004-01-01

    The seabed provides habitat for a diverse marine life having commercial, recreational, and intrinsic value. The habitat value of the seabed is largely a function of the geological structure and related geological, biological, oceanologic, and geochemical processes. Of equal importance, the nation's submerged lands contain energy and mineral resources and are utilized for the siting of offshore infrastructure and waste disposal. Seabed character and processes influence the safety and viability of offshore operations. Seabed and subseabed characterization is a prerequisite for the assessment, protection, and utilization of both living and non-living marine resources. A comprehensive program to characterize and understand the nation's submerged lands requires scientific expertise in the fields of geology, biology, hydrography, and oceanography. The U.S. Geological Survey (USGS) has long experience as the Federal agency charged with conducting geologic research and mapping in both coastal and offshore regions. The USGS Coastal and Marine Geology Program (CMGP) leads the nation in expertise related to characterization of seabed and subseabed geology, geological processes, seabed dynamics, and (in collaboration with the National Oceanic and Atmospheric Administration (NOAA) and international partners) habitat geoscience. Numerous USGS studies show that sea-floor geology and processes determine the character and distribution of biological habitats, control coastal evolution, influence the coastal response to storm events and human alterations, and determine the occurrence and concentration of natural resources.

  6. A hierarchical spatial framework and database for the national river fish habitat condition assessment

    USGS Publications Warehouse

    Wang, L.; Infante, D.; Esselman, P.; Cooper, A.; Wu, D.; Taylor, W.; Beard, D.; Whelan, G.; Ostroff, A.

    2011-01-01

    Fisheries management programs, such as the National Fish Habitat Action Plan (NFHAP), urgently need a nationwide spatial framework and database for health assessment and policy development to protect and improve riverine systems. To meet this need, we developed a spatial framework and database using National Hydrography Dataset Plus (I-.100,000-scale); http://www.horizon-systems.com/nhdplus). This framework uses interconfluence river reaches and their local and network catchments as fundamental spatial river units and a series of ecological and political spatial descriptors as hierarchy structures to allow users to extract or analyze information at spatial scales that they define. This database consists of variables describing channel characteristics, network position/connectivity, climate, elevation, gradient, and size. It contains a series of catchment-natural and human-induced factors that are known to influence river characteristics. Our framework and database assembles all river reaches and their descriptors in one place for the first time for the conterminous United States. This framework and database provides users with the capability of adding data, conducting analyses, developing management scenarios and regulation, and tracking management progresses at a variety of spatial scales. This database provides the essential data needs for achieving the objectives of NFHAP and other management programs. The downloadable beta version database is available at http://ec2-184-73-40-15.compute-1.amazonaws.com/nfhap/main/.

  7. A Process Elaboration Formalism for Writing and Analyzing Programs

    DTIC Science & Technology

    1975-10-01

    program is to be proved, a description of its (i) See [MANN 73] for a survey of these debugging tools, di) See [ELSPAS 72] for a complete review of this...öy the instructions which might be found on a shampoo bottle. 1) Wet hair 2) Lather 3) Rinse «) Repeat Statement 4, the source of the problem, *M...tor this simple aigonthm is shown m Figure 52. SHAMPOO WET-HAIR LATHER RINSE REPEAT - WET-HAIR -> LATHER -> RINSE -> REPEAT - (TCRMMAL "WE’T.’NG

  8. Significant reduction of repeat teen pregnancy in a comprehensive young parent program.

    PubMed

    Omar, H A; Fowler, A; McClanahan, K K

    2008-10-01

    To describe a comprehensive, multidisciplinary approach to teen mothers and their children that significantly reduces repeat pregnancies. Retrospective review of repeat teen pregnancy data. Young Parent Program (YPP) at a university-based health center. 1386 teen mothers between the ages of 11 and 19 who participated in the YPP for at least three years. Comprehensive Care: for both teen mother and her baby, including prenatal and postnatal care, preventive care, reproductive services, mental health, and acute care visits. Family counseling and similar services were also provided to siblings of the teen. CONTINUITY OF CARE: Patients are seen by the same staff and attending physicians on each visit. The treatment team includes physicians, nurses, social worker, nutritionist, and psychologist, all of whom are available to provide care at each visit. Flexible hours: Including evening clinic to allow teens to attend school or work during the day. Financial incentive: Patients with no insurance are given free contraceptives and a "no charge" clinic visit. Extensive contraceptive counseling is provided prior to start of contraceptive use and at every clinic visit. Routine telephone and/or mail reminders of appointments Rate of repeat teen pregnancy. Only 11(.79%) had repeat pregnancies. Older youth appeared more likely to repeat a pregnancy. Comprehensive intervention for teen mothers can be very successful in reducing repeat teen pregnancy in those teens who participate consistently in the program over a period of years.

  9. Photometric Repeatability of Scanned Imagery: UVIS

    NASA Astrophysics Data System (ADS)

    Shanahan, Clare E.; McCullough, Peter; Baggett, Sylvia

    2017-08-01

    We provide the preliminary results of a study on the photometric repeatability of spatial scans of bright, isolated white dwarf stars with the UVIS channel of the Wide Field Camera 3 (WFC3) on the Hubble Space Telescope (HST). We analyze straight-line scans from the first pair of identical orbits of HST program 14878 to assess if sub 0.1% repeatability can be attained with WFC3/UVIS. This study is motivated by the desire to achieve better signal-to-noise in the UVIS contamination and stability monitor, in which observations of standard stars in staring mode have been taken from the installation of WFC3 in 2009 to the present to assess temporal photometric stability. Higher signal to noise in this program would greatly benefit the sensitivity to detect contamination, and to better characterize the observed small throughput drifts over time. We find excellent repeatability between identical visits of program 14878, with sub 0.1% repeatability achieved in most filters. These! results support the initiative to transition the staring mode UVIS contamination and photometric stability monitor from staring mode images to spatial scans.

  10. To Repeat or Not to Repeat a Course

    ERIC Educational Resources Information Center

    Armstrong, Michael J.; Biktimirov, Ernest N.

    2013-01-01

    The difficult transition from high school to university means that many students need to repeat (retake) 1 or more of their university courses. The authors examine the performance of students repeating first-year core courses in an undergraduate business program. They used data from university records for 116 students who took a total of 232…

  11. Environmental Studies of Little River Inlet, Horry County, South Carolina and Brunswick County, North Carolina.

    DTIC Science & Technology

    1976-09-01

    patent tongs. RESULTS AND DISCUSSION I Hydrography and Sediments The Little River Inlet system conforms with Pritchard’s (1955) de - finition of an estuary...operations are planned within the immediate vicinity of these reefs. Provided that no extensive sand ~ I transport from the inlet channel dredging occurs...19 15 Heteromasts filiformis (P) 35 Polychaeta (undet.) 12 23 Sigambra -as-si (P’) 8 23 Ttirbonilla into~ rutA (G) 27 1Aop~j~h.mus verrilli (P) 12 12

  12. Development, description, and application of a geographic information system data base for water resources in Karst Terrane in Greene County, Missouri. Water resources investigation

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Waite, L.A.; Thomson, K.C.

    1993-12-31

    A geographic information system data base was developed for Greene County, Missouri, to provide data for use in the planning for the protection of water resources. The data base contains the following map layers: geology, cave entrances and passages, county and quadrangle boundary, dye traces, faults, geographic names, hypsography, hydrography, lineaments. Ozark aquifer potentiometric surface, public land survey system, sinkholes, soils, springs, and transportation.

  13. Hydrography synthesis using LANDSAT remote sensing and the SCS models

    NASA Technical Reports Server (NTRS)

    Ragan, R. M.; Jackson, T. J.

    1976-01-01

    The land cover requirements of the Soil Conservation Service (SCS) Model used for hydrograph synthesis in urban areas were modified to be LANDSAT compatible. The Curve Numbers obtained with these alternate land cover categories compare well with those obtained in published example problems using the conventional categories. Emergency spillway hydrographs and synthetic flood frequency flows computed for a 21.1 sq. mi. test area showed excellent agreement between the conventional aerial photo-based and the Landsat-based SCS approaches.

  14. Quantitative analysis of drainage obtained from aerial photographs and RBV/LANDSAT images

    NASA Technical Reports Server (NTRS)

    Dejesusparada, N. (Principal Investigator); Formaggio, A. R.; Epiphanio, J. C. N.; Filho, M. V.

    1981-01-01

    Data obtained from aerial photographs (1:60,000) and LANDSAT return beam vidicon imagery (1:100,000) concerning drainage density, drainage texture, hydrography density, and the average length of channels were compared. Statistical analysis shows that significant differences exist in data from the two sources. The highly drained area lost more information than the less drained area. In addition, it was observed that the loss of information about the number of rivers was higher than that about the length of the channels.

  15. Reinventing Amphibious Hydrography: The Inchon Assault and Hydrographic Support for Amphibious Operations

    DTIC Science & Technology

    2008-10-31

    bloody type of on-the-job training for the Army and Marine Corps. The Battle of Tarawa was particularly bloody due to poorly calculated tidal data and...knots flowed through Inchon harbor’s approach, Flying Fish Channel, while mudflats and banks extended thousands of yards from Inchon’s seawall.9...navigation past the mud banks (and) islands”.10 Furthermore, the gradient of the seabed approaching Inchon sloped very gradually, so that a high tide of

  16. Seasonal cycles of zooplankton from San Francisco Bay

    USGS Publications Warehouse

    Ambler, Julie W.; Cloern, James E.; Hutchinson, Anne

    1985-01-01

    Seasonal cycles of zooplankton abundance appear to be constant among years (1978–1981) and are similar in the deep (>10 m) channels and lateral shoals (<3 m). The seasonal zooplankton community dynamics are discussed in relation to: (1) river discharge which alters salinity distribution and residence time of plankton; (2) temperature which induces production and hatching of dormant copepod eggs; (3) coastal hydrography which brings neritic copepods of different zoogeographic affinities into the bay; and (4) seasonal cycles of phytoplankton.

  17. [Actual circumstances of suicides and related factors according to newspaper coverage of television programs].

    PubMed

    Takamura, Soichi; Shimizu, Takahiro; Nekoda, Yasutoshi

    2015-01-01

    This study investigated the actual circumstances of suicides and related factors based on TV program pages in newspapers. Information was extracted from the television schedule columns of one major newspaper introducing programs from 2004 to June 2009. During information extraction, reliability was maintained by having 2 researchers specializing in mental health make determinations independently. We examined the column for program names and introductions of 6 broadcast TV channels within the television schedule for data analysis. After information was extracted using the established selection criteria regarding suicide and related information, information extraction was performed for sub-themes in the TV programs. Information was also classified with regard to specialization and program genre or other related context as well as the presence or absence of an experiential narrative. In addition to carrying out the qualitative classification of these collected information data, we compared the numbers and proportion (%) in chronological order and context. Moreover, programs dealing repeatedly with one case were analyzed for trends in the contents of program introductions and in the media. Depending on the season, some programs constantly broadcast about suicides, mainly in spring and autumn. Most of these programs air on Tuesday and Wednesday. We also analyzed programs that repeatedly discussed the same case and identified eight cases repeatedly discussed by more than ten different programs. We also considered bullying, homicide, and depression, which appeared most frequently as subthemes of suicide. An unprofessional approach was observed in 504 programs (81%), whereas only 47 (7.6%) showed expertise. Depending on the season and day of the week, suicide is constantly broadcasted on TV programs. We also considered mental health because bullying was a common subtheme in this context. An unprofessional approach was seen in most programs. We also studied programs that repeatedly discussed the same case because overexposure of offenders in programs can lead to secondary suicides.

  18. Altimeter Processing Tools for Analyzing Mesoscale Ocean Features

    DTIC Science & Technology

    1990-09-01

    However, since the programs are modular, users can easily use their own orbit and geoid corrections to study basin scale problems. We left programs that...g..repeat c*/c*.a002c > a002cs-m or %g.repeat c???/c???.a002c > a002cs-m The file aOO2cs.m contains the following information in tab delimited ...information in tab delimited columns: The sea surface height residual files are similar to those created by g.repeat. except that fi(z ,t) is the original

  19. Species-environment relationships and potential for distribution modelling in coastal waters

    NASA Astrophysics Data System (ADS)

    Snickars, M.; Gullström, M.; Sundblad, G.; Bergström, U.; Downie, A.-L.; Lindegarth, M.; Mattila, J.

    2014-01-01

    Due to increasing pressure on the marine environment there is a growing need to understand species-environment relationships. To provide background for prioritising among variables (predictors) for use in distribution models, the relevance of predictors for benthic species was reviewed using the coastal Baltic Sea as a case-study area. Significant relationships for three response groups (fish, macroinvertebrates, macrovegetation) and six predictor categories (bottom topography, biotic features, hydrography, wave exposure, substrate and spatiotemporal variability) were extracted from 145 queried peer-reviewed field-studies covering three decades and six subregions. In addition, the occurrence of interaction among predictors was analysed. Hydrography was most often found in significant relationships, had low level of interaction with other predictors, but also had the most non-significant relationships. Depth and wave exposure were important in all subregions and are readily available, increasing their applicability for cross-regional modelling efforts. Otherwise, effort to model species distributions may prove challenging at larger scale as the relevance of predictors differed among both response groups and regions. Fish and hard bottom macrovegetation have the largest modelling potential, as they are structured by a set of predictors that at the same time are accurately mapped. A general importance of biotic features implies that these need to be accounted for in distribution modelling, but the mapping of most biotic features is challenging, which currently lowers the applicability. The presence of interactions suggests that predictive methods allowing for interactive effects are preferable. Detailing these complexities is important for future distribution modelling.

  20. Comparison of Surface Flow Features from Lidar-Derived Digital Elevation Models with Historical Elevation and Hydrography Data for Minnehaha County, South Dakota

    USGS Publications Warehouse

    Poppenga, Sandra K.; Worstell, Bruce B.; Stoker, Jason M.; Greenlee, Susan K.

    2009-01-01

    The U.S. Geological Survey (USGS) has taken the lead in the creation of a valuable remote sensing product by incorporating digital elevation models (DEMs) derived from Light Detection and Ranging (lidar) into the National Elevation Dataset (NED), the elevation layer of 'The National Map'. High-resolution lidar-derived DEMs provide the accuracy needed to systematically quantify and fully integrate surface flow including flow direction, flow accumulation, sinks, slope, and a dense drainage network. In 2008, 1-meter resolution lidar data were acquired in Minnehaha County, South Dakota. The acquisition was a collaborative effort between Minnehaha County, the city of Sioux Falls, and the USGS Earth Resources Observation and Science (EROS) Center. With the newly acquired lidar data, USGS scientists generated high-resolution DEMs and surface flow features. This report compares lidar-derived surface flow features in Minnehaha County to 30- and 10-meter elevation data previously incorporated in the NED and ancillary hydrography datasets. Surface flow features generated from lidar-derived DEMs are consistently integrated with elevation and are important in understanding surface-water movement to better detect surface-water runoff, flood inundation, and erosion. Many topographic and hydrologic applications will benefit from the increased availability of accurate, high-quality, and high-resolution surface-water data. The remotely sensed data provide topographic information and data integration capabilities needed for meeting current and future human and environmental needs.

  1. Upper layer circulation, hydrography, and biological response of the Andaman waters during winter monsoon based on in situ and satellite observations

    NASA Astrophysics Data System (ADS)

    Chandran, Salini Thaliyakkattil; Raj, Smitha Bal; Ravindran, Sajeev; Narayana, Sanjeevan Vellorkirakathil

    2018-05-01

    Upper layer circulation, hydrography, and biological response of Andaman waters during winter monsoon are assessed based on the observations carried out onboard FORV Sagar Sampada during January 2009 and November-December 2011. Cool and dry air carried by the moderate winds (6 m/s) from north and northeast indicates the influence of northeast monsoon (NEM) in the area during the observation time. The characteristics of physical parameters and the water mass indicate that the southeastern side is dominated by the less saline water from South China Sea intruded through the Malacca Strait, whereas the northeast is influenced by the freshwater from Ayeyarwady-Salween river system. The western side of the Andaman and Nicobar Islands exhibits similar properties of Bay of Bengal (BoB) water as evidenced in the T-S relation. Circulation pattern is uniform for the upper 88 m and is found to be more geostrophic rather than wind driven. Magnitude of the current velocity varies between 100 and 900 mm/s in November-December 2011 with strong current (900 mm/s) near Katchal and Nancowry islands and 100 and 1000 mm/s in January 2009 recording strong current (1000 mm/s) near the Little Nicobar Island. The Andaman waters are observed as less productive during the season based on the satellite-derived surface chl-a (0.1-0.4 mg/m3) and column-integrated primary productivity (PP) (100-275 mgC/m2/d).

  2. Wind-driven export of Weddell Sea slope water

    NASA Astrophysics Data System (ADS)

    Meijers, A. J. S.; Meredith, M. P.; Abrahamsen, E. P.; Morales Maqueda, M. A.; Jones, D. C.; Naveira Garabato, A. C.

    2016-10-01

    The export of waters from the Weddell Gyre to lower latitudes is an integral component of the southern subpolar contribution to the three-dimensional oceanic circulation. Here we use more than 20 years of repeat hydrographic data on the continental slope on the northern tip of the Antarctic Peninsula and 5 years of bottom lander data on the slope at 1000 m to show the intermittent presence of a relatively cold, fresh, westward flowing current. This is often bottom-intensified between 600 and 2000 dbar with velocities of over 20 cm s-1, transporting an average of 1.5 ± 1.5 Sv. By comparison with hydrography on the continental slope within the Weddell Sea and modeled tracer release experiments we show that this slope current is an extension of the Antarctic Slope Current that has crossed the South Scotia Ridge west of Orkney Plateau. On monthly to interannual time scales the density of the slope current is negatively correlated (r > 0.6 with a significance of over 95%) with eastward wind stress over the northern Weddell Sea, but lagging it by 6-13 months. This relationship holds in both the high temporal resolution bottom lander time series and the 20+ year annual hydrographic occupations and agrees with Weddell Sea export variability observed further east. We compare several alternative hypotheses for this wind stress/export relationship and find that it is most consistent with wind-driven acceleration of the gyre boundary current, possibly modulated by eddy dynamics, and represents a mechanism by which climatic perturbations can be rapidly transmitted as fluctuations in the supply of intermediate-level waters to lower latitudes.

  3. Contagion and Repeat Offending among Urban Juvenile Delinquents

    ERIC Educational Resources Information Center

    Mennis, Jeremy; Harris, Philip

    2011-01-01

    This research investigates the role of repeat offending and spatial contagion in juvenile delinquency recidivism using a database of 7166 male juvenile offenders sent to community-based programs by the Family Court of Philadelphia. Results indicate evidence of repeat offending among juvenile delinquents, particularly for drug offenders. The…

  4. The Gulf of California: Review of ecosystem status and sustainability challenges

    NASA Astrophysics Data System (ADS)

    Lluch-Cota, Salvador E.; Aragón-Noriega, Eugenio A.; Arreguín-Sánchez, Francisco; Aurioles-Gamboa, David; Jesús Bautista-Romero, J.; Brusca, Richard C.; Cervantes-Duarte, Rafael; Cortés-Altamirano, Roberto; Del-Monte-Luna, Pablo; Esquivel-Herrera, Alfonso; Fernández, Guillermo; Hendrickx, Michel E.; Hernández-Vázquez, Sergio; Herrera-Cervantes, Hugo; Kahru, Mati; Lavín, Miguel; Lluch-Belda, Daniel; Lluch-Cota, Daniel B.; López-Martínez, Juana; Marinone, Silvio G.; Nevárez-Martínez, Manuel O.; Ortega-García, Sofia; Palacios-Castro, Eduardo; Parés-Sierra, Alejandro; Ponce-Díaz, Germán; Ramírez-Rodríguez, Mauricio; Salinas-Zavala, Cesar A.; Schwartzlose, Richard A.; Sierra-Beltrán, Arturo P.

    2007-04-01

    The Gulf of California is unique because of its geographical location and conformation. It hosts diverse ecosystems and important fisheries that support industry and provide livelihood to coastal settlements. It is also the site of interests and problems, and an intense interaction among managers, producers, and conservationists. In this report, we scrutinize the abiotic (hydrography, climate, ocean circulation, and chemistry) and biotic (phyto- and zooplankton, fish, invertebrates, marine mammals, birds, and turtles) components of the marine ecosystem, and some particular aspects of climate variability, endemisms, harmful algal blooms, oxygen minimum layer, and pollution. We also review the current conditions and conflicts around the main fisheries (shrimp, small and large pelagic fishes, squid, artisanal and sportfishing), the most important human activity in the Gulf of California. We cover some aspects of management and conservation of fisheries, especially the claimed overexploitation of fish resources and the ecosystems, and review proposals for creating networks of marine protected areas. We conclude by identifying main needs for information and research, particularly the integration of data bases, the implementation of models and paleoreconstructions, establishment of monitoring programs, and the evaluation of fishing impacts and management actions.

  5. Geologic map of Kundelan ore deposits and prospects, Zabul Province, Afghanistan; modified from the 1971 original map compilations of K.I. Litvinenko and others

    USGS Publications Warehouse

    Tucker, Robert D.; Peters, Stephen G.; Stettner, Will R.; Masonic, Linda M.; Moran, Thomas W.

    2015-10-26

    Elevations on the cross sections are derived from the original Soviet topography and may not match the Global Digital Elevation Model (GDEM) topography used on the redrafted map of this report. Most hydrography derived from the Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) has not been included on our redrafted version of the map because of a poor fit with alluvial deposits from the unmodified original Soviet map (graphical supplement no. 18; Litvinenko and others, 1971).

  6. New global hydrography derived from spaceborne elevation data

    USGS Publications Warehouse

    Lehner, B.; Verdin, K.; Jarvis, A.

    2008-01-01

    In response to these limitations, a team of scientists has developed data and created maps of the world's rivers that provide the research community with more reliable information about where streams and watersheds occur on the Earth's surface and how water drains the landscape. The new product, known as HydroSHEDS (Hydrological Data and Maps Based on Shuttle Elevation Derivatives at Multiple Scales), provides this information at a resolution and quality unachieved by previous global data sets, such as HYDRO1k [U.S. Geological Survey (USGS), 2000].

  7. Validation of Surface Bio-Optical Properties in the Gulf of Maine as a Means for Improving Satellite Primary Production Estimates. Chapter 4

    NASA Technical Reports Server (NTRS)

    Balch, William M.

    2001-01-01

    One of the greatest challenges in providing sea-truth data for various ocean color sensors is climatology. This is particularly true in the Gulf of Maine since it is cloudy and foggy more than it is clear; the climatology shows on average, about one in four to five days has clear skies with clear days slightly more frequent in the late summer and early fall. Our strategy has been to use a ship of opportunity where one has choice of the sampling days. This provides much better flexibility to sample during clear periods with good satellite coverage. Our Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) contract has been to use the M/S Scotia Prince ferry as a ship of opportunity, running between Portland, Maine and Yarmouth, NS. Measurements include continuous, surface, along-track fluorescence, two independent measures of backscattering, total light scattering, absorption, beam attenuation, above-water remote sensing reflectance, calcite-dependent light scattering, temperature, and salinity. Expendable bathythermography (XBT) drops allow acquisition of vertical temperature information, useful for defining isopycnal slope, which affects primary production. These data are comparable to a previous program from early 1982, where a ship of opportunity program (SOOP) was run on the truck ferry, M/V Marine Evangeline, which ran along the same transect. These surface data were combined with satellite-derived sea surface temperature fields to examine the Maine coastal current. Unfortunately, this program stopped in 1982. The ongoing SIMBIOS results will dovetail nicely with the previous work (which also had Coastal Zone Color Scanner (CZCS) coverage) for looking at any long-term changes in the Gulf of Maine hydrography, bio-optics, and biogeochemistry.

  8. Repeater in the sky. [public service communications satellite program

    NASA Technical Reports Server (NTRS)

    Cote, C. E.; Brown, J. P.

    1977-01-01

    The Public Service Communications Satellite (PSCS) program is intended to develop and demonstrate a space system aimed at stimulating future commercial markets in fixed and mobile applications. The services are envisioned for rural areas, regions beyond access to terrestrial systems, or for continuous cross-country applications. The system incorporates a UHF repeater for mobile voice and data experiments; 8 MHz of spectrum is specified for serving 70 channels. This paper describes the PSCS program and discusses some demonstration experiments. A future concept based on large structure multibeam antennas is also discussed.

  9. Circulation, Hydrography, and Transport over the Summit of Axial-the Destination Node of OOI's Cabled Array

    NASA Astrophysics Data System (ADS)

    Xu, G.; Lavelle, J. W.

    2016-12-01

    A numerical model of ocean flow and transport is used to extrapolate observations of currents and hydrography and infer patterns of material flux in the deep ocean around Axial Volcano--the destination node of the Ocean Observatories Initiative (OOI)'s Cabled Array. Using an inverse method, the model is made to approximate measured deep ocean flow around this site during a 35-day time period in 2002. The model is then used to extract month-long mean patterns and examine smaller-scale spatial and temporal variability around Axial. Like prior observations, model month-long mean currents flow anti-cyclonically (clockwise) around the volcano's summit in toroidal form at speeds of up to 7 cm/s. The mean vertical circulation has a net effect of pumping water out of the caldera. Temperature and salinity iso-surfaces sweep upward and downward on opposite sides of the volcano with vertical excursions of up to 70 m. As a time mean, the temperature (salinity) anomaly takes the form of a cold (briny) dome above the summit. Passive tracer material released at the location of the ASHES vent field exits the caldera through its southern open end and over the western bounding wall driven by vertical flow. Once outside the caldera, the tracer circles the summit in clockwise fashion, while gradually bleeding southwestward into the ambient ocean. Another tracer release experiment using a source of 2-day duration inside and near the northern end of the caldera suggests a residence time of the fluid at that locale of 5-6 days.

  10. Watershed boundaries and digital elevation model of Oklahoma derived from 1:100,000-scale digital topographic maps

    USGS Publications Warehouse

    Cederstrand, J.R.; Rea, A.H.

    1995-01-01

    This document provides a general description of the procedures used to develop the data sets included on this compact disc. This compact disc contains watershed boundaries for Oklahoma, a digital elevation model, and other data sets derived from the digital elevation model. The digital elevation model was produced using the ANUDEM software package, written by Michael Hutchinson and licensed from the Centre for Resource and Environmental Studies at The Australian National University. Elevation data (hypsography) and streams (hydrography) from digital versions of the U.S. Geological Survey 1:100,000-scale topographic maps were used by the ANUDEM package to produce a hydrologically conditioned digital elevation model with a 60-meter cell size. This digital elevation model is well suited for drainage-basin delineation using automated techniques. Additional data sets include flow-direction, flow-accumulation, and shaded-relief grids, all derived from the digital elevation model, and the hydrography data set used in producing the digital elevation model. The watershed boundaries derived from the digital elevation model have been edited to be consistent with contours and streams from the U.S. Geological Survey 1:100,000-scale topographic maps. The watershed data set includes boundaries for 11-digit Hydrologic Unit Codes (watersheds) within Oklahoma, and 8-digit Hydrologic Unit Codes (cataloging units) outside Oklahoma. Cataloging-unit boundaries based on 1:250,000-scale maps outside Oklahoma for the Arkansas, Red, and White River basins are included. The other data sets cover Oklahoma, and where available, portions of 1:100,000-scale quadrangles adjoining Oklahoma.

  11. Multicriteria analysis using open-source data and software for the implementation of a centralized biomedical waste management system in a developing country (Guinea, Conakry).

    NASA Astrophysics Data System (ADS)

    Pérez Peña, José Vicente; Baldó, Mane; Acosta, Yarci; Verschueren, Laurent; Thibaud, Kenmognie; Bilivogui, Pépé; Jean-Paul Ngandu, Alain; Beavogui, Maoro

    2017-04-01

    In the last decade the increasing interest for public health has promoted specific regulations for the transport, storage, transformation and/or elimination of potentially toxic waste. A special concern should focus on the effective management of biomedical waste, due to the environmental and health risk associated with them. The first stage for the effective management these waste includes the selection of the best sites for the location of facilities for its storage and/or elimination. Best-site selection is accomplished by means of multi-criteria decision analyses (MCDA) that aim to minimize the social and environmental impact, and to maximize management efficiency. In this work we presented a methodology that uses open-source software and data to analyze the best location for the implantation of a centralized waste management system in a developing country (Guinea, Conakry). We applied an analytical hierarchy process (AHP) using different thematic layers such as land use (derived from up-to-date Sentinel 2 remote sensing images), soil type, distance and type of roads, hydrography, distance to dense populated areas, etc. Land-use data were derived from up-to-date Sentinel 2 remote sensing images, whereas roads and hydrography were obtained from the Open Street Map database and latter validated with administrative data. We performed the AHP analysis with the aid of QGIS open-software Geospatial Information System. This methodology is very effective for developing countries as it uses open-source software and data for the MCDA analysis, thus reducing costs in these first stages of the integrated analysis.

  12. Repeatable, accurate, and high speed multi-level programming of memristor 1T1R arrays for power efficient analog computing applications.

    PubMed

    Merced-Grafals, Emmanuelle J; Dávila, Noraica; Ge, Ning; Williams, R Stanley; Strachan, John Paul

    2016-09-09

    Beyond use as high density non-volatile memories, memristors have potential as synaptic components of neuromorphic systems. We investigated the suitability of tantalum oxide (TaOx) transistor-memristor (1T1R) arrays for such applications, particularly the ability to accurately, repeatedly, and rapidly reach arbitrary conductance states. Programming is performed by applying an adaptive pulsed algorithm that utilizes the transistor gate voltage to control the SET switching operation and increase programming speed of the 1T1R cells. We show the capability of programming 64 conductance levels with <0.5% average accuracy using 100 ns pulses and studied the trade-offs between programming speed and programming error. The algorithm is also utilized to program 16 conductance levels on a population of cells in the 1T1R array showing robustness to cell-to-cell variability. In general, the proposed algorithm results in approximately 10× improvement in programming speed over standard algorithms that do not use the transistor gate to control memristor switching. In addition, after only two programming pulses (an initialization pulse followed by a programming pulse), the resulting conductance values are within 12% of the target values in all cases. Finally, endurance of more than 10(6) cycles is shown through open-loop (single pulses) programming across multiple conductance levels using the optimized gate voltage of the transistor. These results are relevant for applications that require high speed, accurate, and repeatable programming of the cells such as in neural networks and analog data processing.

  13. Contrasting patterns of phytoplankton pigments and chemotaxonomic groups along 30°S in the subtropical South Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Araujo, Milton Luiz Vieira; Mendes, Carlos Rafael Borges; Tavano, Virginia Maria; Garcia, Carlos Alberto Eiras; Baringer, Molly O'Neil

    2017-02-01

    This work describes the spatial distribution of pigments and main taxonomic groups of phytoplankton in the biogeochemical provinces of the subtropical South Atlantic Ocean, along 30°S latitude. Seawater samples (surface to 200 m depth) were collected along 120 oceanographic stations occupied in the early austral spring of 2011, during a CLIVAR Repeat Hydrography cruise. The pigments were identified and quantified by high performance liquid chromatography (HPLC), and CHEMTAX software was used to determine the relative contributions of the main taxonomic groups to total chlorophyll a (phytoplankton biomass index). Sampling stations were grouped into three provinces: Africa, Gyre, and Brazil, corresponding to the eastern, central, and western sectors of the transect, respectively. Our results showed that both vertical and horizontal distribution patterns of pigments and taxonomic groups were mainly determined by the availability of light and/or nutrients. Photosynthetic carotenoids (PSCs), associated with small flagellates (mainly haptophytes), dominated the light-limited and nutrient-enhanced deep chlorophyll maximum (DCM) layers of both the Brazil and Gyre provinces, as well as the upwelling influenced surface waters of the Africa province. The latter showed the highest chlorophyll a values ​​(>1 mg m-3) and abundance of dinoflagellates in the coastal region. Photoprotective carotenoids (PPCs) were predominant in the nutrient-poor and well-lit surface layers of the Brazil and Gyre provinces, associated with a low content of chlorophyll a ( 0.1 mg m-3) and dominance of prokaryotes (Synechoccocus and Prochloroccocus). This study demonstrates that pigment analysis can provide a useful approach to better understand the distribution of phytoplankton communities along physical-chemical gradients in a still undersampled region of the South Atlantic Ocean.

  14. The formation of a subsurface anticyclonic eddy in the Peru-Chile Undercurrent and its impact on the near-coastal salinity, oxygen, and nutrient distributions

    NASA Astrophysics Data System (ADS)

    Thomsen, Soeren; Kanzow, Torsten; Krahmann, Gerd; Greatbatch, Richard J.; Dengler, Marcus; Lavik, Gaute

    2016-01-01

    The formation of a subsurface anticyclonic eddy in the Peru-Chile Undercurrent (PCUC) in January and February 2013 is investigated using a multiplatform four-dimensional observational approach. Research vessel, multiple glider, and mooring-based measurements were conducted in the Peruvian upwelling regime near 12°30'S. The data set consists of >10,000 glider profiles and repeated vessel-based hydrography and velocity transects. It allows a detailed description of the eddy formation and its impact on the near-coastal salinity, oxygen, and nutrient distributions. In early January, a strong PCUC with maximum poleward velocities of ˜0.25 m/s at 100-200 m depth was observed. Starting on 20 January, a subsurface anticyclonic eddy developed in the PCUC downstream of a topographic bend, suggesting flow separation as the eddy formation mechanism. The eddy core waters exhibited oxygen concentration of <1 μmol/kg, an elevated nitrogen deficit of ˜17 μmol/L, and potential vorticity close to zero, which seemed to originate from the bottom boundary layer of the continental slope. The eddy-induced across-shelf velocities resulted in an elevated exchange of water masses between the upper continental slope and the open ocean. Small-scale salinity and oxygen structures were formed by along-isopycnal stirring, and indications of eddy-driven oxygen ventilation of the upper oxygen minimum zone were observed. It is concluded that mesoscale stirring of solutes and the offshore transport of eddy core properties could provide an important coastal open ocean exchange mechanism with potentially large implications for nutrient budgets and biogeochemical cycling in the oxygen minimum zone off Peru.

  15. Distractor-based stimulus-response bindings retrieve decisions independent of motor programs.

    PubMed

    Nett, Nadine; Bröder, Arndt; Frings, Christian

    2016-11-01

    Research on the distractor response binding (DRB) effect (Frings, Rothermund, & Wentura, 2007) suggests that distractors are integrated with target responses into an event file or stimulus-response (SR) episode. The whole event file is retrieved when the distractor is repeated and as a consequence distractors can retrieve previous responses. Nett, Bröder, and Frings (2015) argued that even decisions under uncertainty are integrated into event files and can later on be retrieved by distractors. However, their paradigm did not allow disentangling the retrieval of decisions from the retrieval of motor programs. Here we disentangled the retrieval of decisions and motor programs by assuring that retrieved decisions were not confounded by the repetitions of motor programs. In particular, in two experiments using a sequential prime-probe distractor priming task participants used other keys or other effectors for prime and probe responses; nevertheless repeated task-irrelevant distractors increased the probability that participants repeated the prime decision irrespective of motor programs. Thus, decision features can become part of an event-file and directly be retrieved by irrelevant information suggesting that bindings have an even higher flexibility and ubiquity than previously assumed. Copyright © 2016 Elsevier B.V. All rights reserved.

  16. Mapping benefits from updated ifsar data in Alaska: improved source data enables better maps

    USGS Publications Warehouse

    Craun, Kari J.

    2015-08-06

    The U.S. Geological Survey (USGS) and partners in other Federal and State agencies are working collaboratively toward Statewide coverage of interferometric synthetic aperture radar (ifsar) elevation data in Alaska. These data will provide many benefits to a wide range of stakeholders and users. Some applications include development of more accurate and highly detailed topographic maps; improvement of surface water information included in the National Hydrography (NHD) and Watershed Boundary Datasets (WBDs); and use in scientific modeling applications such as calculating glacier surface elevation differences over time and estimating tsunami inundation areas.

  17. Introduction to geospatial semantics and technology workshop handbook

    USGS Publications Warehouse

    Varanka, Dalia E.

    2012-01-01

    The workshop is a tutorial on introductory geospatial semantics with hands-on exercises using standard Web browsers. The workshop is divided into two sections, general semantics on the Web and specific examples of geospatial semantics using data from The National Map of the U.S. Geological Survey and the Open Ontology Repository. The general semantics section includes information and access to publicly available semantic archives. The specific session includes information on geospatial semantics with access to semantically enhanced data for hydrography, transportation, boundaries, and names. The Open Ontology Repository offers open-source ontologies for public use.

  18. Repeatability in photo-interpretation of tree canopy cover and its effect on predictive mapping

    Treesearch

    Thomas A. Jackson; Gretchen G. Moisen; Paul L. Patterson; John Tipton

    2012-01-01

    In this study, we explore repeatability in photo-interpreted imagery from the National Agriculture Imagery Program that was sampled as part of the National Land Cover Database 2011 Tree Canopy Cover pilot project. Data were collected in 5 diverse pilot areas in the US, including one each in Oregon, Utah, Kansas, Michigan and Georgia. Repeatability metrics. The intra-...

  19. Profile of addicted patients who reenter treatment programs.

    PubMed

    López-Goñi, José J; Fernández-Montalvo, Javier; Cacho, Raúl; Arteaga, Alfonso

    2014-01-01

    Clinical experience shows that some patients who suffer from drug addiction are readmitted to treatment programs multiple times because of relapses that occur after they leave these programs. Patients who reenter treatment programs repeatedly may do so because they have problems or difficulties that were not addressed or that were not satisfactorily solved during previous treatment periods. This study explored the differential profile of addicted patients who reenter treatment programs. A sample of 252 addicted patients (203 male and 49 female) who sought outpatient treatment was assessed. Data regarding sociodemographic factors, drug consumption factors (assessed using the EuropASI), psychopathological factors (assessed using the Symptom Checklist-90-Revised [SCL-90-R]), and personality variables (assessed using the Millon Clinical Multiaxial Inventory II [MCMI-II]) were collected. A 65.9% (n = 166) of drug-addicted patients were readmitted into treatment programs. All of the variables for which data were collected were compared between these treatment repeaters and patients who were admitted for the first time. Significant differences between the 2 groups of patients were found for some of the variables that we examined. Treatment repeaters were generally older and had a poorer employment situation than first-time admits. Treatment repeaters were also more likely to report polyconsumption and to have sought treatment for alcohol abuse. Moreover, some of the scores for several EuropASI, SCL-90-R, and MCMI-II variables were statistically significantly different from those of the first-time admits. According to these results, patients who reenter treatment programs often present with more severe addiction problems. All of these data suggest that treatment programs should incorporate a detailed analysis regarding the existence and nature of prior treatments into the baseline protocols and they should offer follow-up services to patients who have completed their treatments. The implications of these results for further research and clinical practice are discussed.

  20. 45 CFR 308.2 - Required program compliance criteria.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... Motor Vehicles, and credit bureaus; (iii) Repeating location attempts quarterly and when new information... employment security agency, Department of motor vehicles, and credit bureaus; (ii) Repeating attempts to..., State employment security agency, unemployment data, Department of Motor Vehicles, and credit bureaus...

  1. Basin Assessment Spatial Planning Platform

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    The tool is intended to facilitate hydropower development and water resource planning by improving synthesis and interpretation of disparate spatial datasets that are considered in development actions (e.g., hydrological characteristics, environmentally and culturally sensitive areas, existing or proposed water power resources, climate-informed forecasts). The tool enables this capability by providing a unique framework for assimilating, relating, summarizing, and visualizing disparate spatial data through the use of spatial aggregation techniques, relational geodatabase platforms, and an interactive web-based Geographic Information Systems (GIS). Data are aggregated and related based on shared intersections with a common spatial unit; in this case, industry-standard hydrologic drainagemore » areas for the U.S. (National Hydrography Dataset) are used as the spatial unit to associate planning data. This process is performed using all available scalar delineations of drainage areas (i.e., region, sub-region, basin, sub-basin, watershed, sub-watershed, catchment) to create spatially hierarchical relationships among planning data and drainages. These entity-relationships are stored in a relational geodatabase that provides back-end structure to the web GIS and its widgets. The full technology stack was built using all open-source software in modern programming languages. Interactive widgets that function within the viewport are also compatible with all modern browsers.« less

  2. Marine Arctic Ecosystem Study (MARES) - An Integrated Approach to the Dynamics of the Beaufort Sea

    NASA Astrophysics Data System (ADS)

    Wiese, F. K.; Gryba, R.; Kelly, B. P.

    2016-02-01

    MARES is an integrated ecosystem research initiative coordinated and planned by the Bureau of Ocean Energy Management, the Office of Naval Research, the National Aeronautics and Space Administration, the U.S. Coast Guard, and Shell through the National Oceanographic Partnership Program. The overarching goal is to advance our knowledge of the structure and function of the Beaufort Sea marine ecosystem so as to link atmospheric and oceanic drivers to sea ice patterns and marine mammal distribution and availability to local subsistence communities. The study, funded in 2014, focuses on the marine ecosystem along the Beaufort Sea shelf from Barrow, Alaska to the Mackenzie River delta in Canada and is scheduled to include bio-physical moorings along the US-Canadian border, glider deployments packed with bio-physical sensors, tagging of whales and ice-associated seals with satellite CTD-Fluorometer tags, biophysical and chemical cruises including the measurement and characterization of hydrography, ice, nutrients, primary and secondary production, carbon budgets, benthic fauna, fish, as well as analysis of freshwater input and chemical loadings, and ecosystem modeling. This presentation will focus on preliminary results from the ice seal tagging that started in the summer of 2015 and describe some of the planning and possibilities for partnerships for the more comprehensive 2016 field season and beyond.

  3. Direct evaluation of fault trees using object-oriented programming techniques

    NASA Technical Reports Server (NTRS)

    Patterson-Hine, F. A.; Koen, B. V.

    1989-01-01

    Object-oriented programming techniques are used in an algorithm for the direct evaluation of fault trees. The algorithm combines a simple bottom-up procedure for trees without repeated events with a top-down recursive procedure for trees with repeated events. The object-oriented approach results in a dynamic modularization of the tree at each step in the reduction process. The algorithm reduces the number of recursive calls required to solve trees with repeated events and calculates intermediate results as well as the solution of the top event. The intermediate results can be reused if part of the tree is modified. An example is presented in which the results of the algorithm implemented with conventional techniques are compared to those of the object-oriented approach.

  4. United States Air Force Summer Faculty Research Program (1984). Program Management Report. Volume 3

    DTIC Science & Technology

    1984-12-01

    Database Design 蕄 Raman Spectroscopy of Dr. Boake L. Plessy Glycosaminoglycans from -* Bovine Cornea 117 Study of Control Mixer Concept Dr. Kuldip S...simultaneously in polarized and non -polarized controls were repeated three times at 260-64, 368-70, 604-8-13, 735-7-40, 1277-80, 1760, 1775, and 1820 or four...times at S240-2-4, 1020 and 1874-8-90. Pooling replicates from the non -polarized components, six controls and two cAMP treatments, events repeating

  5. Preventing rapid repeat pregnancy and promoting positive parenting among young mothers in foster care.

    PubMed

    Finigan-Carr, Nadine M; Murray, Kantahyanee W; O'Connor, Julia M; Rushovich, Berenice R; Dixon, Desyree A; Barth, Richard P

    2015-01-01

    Young mothers in foster care face considerable challenges above and beyond that of their non-foster care peers. Child welfare workers have few resources to guide them in the selection of evidence-informed programs, models, and strategies that address the unique risk factors and needs of youth in foster care who are at risk for rapid repeat pregnancy and inadequate parenting practices. Workers need knowledge of the evidence about which programs are most likely to improve key health and well-being outcomes. The article assesses the evidence-based programs identified and yields a list that reflects the best evidence for efficacy and effectiveness.

  6. Evaluation of a day reporting center for repeat DWI offenders

    DOT National Transportation Integrated Search

    1999-08-01

    Describes and evaluates the effectiveness of a Day Reporting Center (DRC) in reducing the driving while intoxicated (DWI) recidivism of repeat DWI offenders. It also examines the effect of the DRC program in reducing the cost of post-conviction sanct...

  7. 45 CFR 308.2 - Required program compliance criteria.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ..., State employment security agency, employment data, Department of Motor Vehicles, and credit bureaus... vehicles, and credit bureaus; (ii) Repeating attempts to locate quarterly and when new information is..., Department of Motor Vehicles, and credit bureaus; (ii) Repeating location attempts quarterly and when new...

  8. Hydrographic characterization of southeast Arabian Sea during the wane of southwest monsoon and spring intermonsoon.

    PubMed

    Vimal Kumar, K G; Dinesh Kumar, P K; Smitha, B R; Habeeb Rahman, H; Josia, Jacob; Muraleedharan, K R; Sanjeevan, V N; Achuthankutty, C T

    2008-05-01

    Seasonal variation of the hydrography along the southeast Arabian Sea is described using data collected onboard FORV Sagar Sampada in September--October 2003 (later phase of Southwest monsoon, SWM) and March--April 2004 (Spring inter monsoon, SIM). During the later phase of the SWM, upwelling was in the withdrawal phase and the frontal structure was clearer in the northern sections (13 and 15 degrees N lat) indicating strong upwelling in the area. The driving force of upwelling is identified as the combination of alongshore wind stress and remote forcing with a latitudinal variability. Although a more prominent upwelling was found in the north, a maximum surface Chlorophyll-a was found in the south (10 degrees N). During the SIM, the area was characterized by oligotrophic water with relatively high Sea Surface Temperature (>29 degrees C) and low salinity (33.8 to 35.4). During March, the surface hydrography was found to be controlled mainly by the intrusion of low-saline waters from the south, while during September by the high saline water from the north. The presence of various water masses [Arabian Sea High Salinity Water (ASHSW), Persian Gulf Water (PGW), Red Sea Water (RSW)] and their seasonal variations in the region is discussed and their decreasing influence towards the south is noted during both periods of observation. During the SWM, the dynamic topography showed the equator-ward flow of the West India Coastal Current (WICC) at the surface and a pole-ward coastal under current at sub-thermocline depth. During the SIM, surface circulation revealed the WICC flowing pole-ward north of 13 degrees N, but equator-ward flow in the south, with a clockwise circulation around the Lakshadweep High.

  9. Inland area contingency plan and maps for Pennsylvania (on CD-ROM). Data file

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    1996-12-01

    EPA Region III has assembled on this CD a multitude of environmental data, in both visual and textual formats. While targeted for Facility Response Planning under the Oil Pollution Act of 1990, this information will prove helpful to anyone in the environmental arena. Specifically, the CD will aid contingency planning and emergency response personnel. Combining innovative GIS technology with EPA`s state-specific data allows you to display maps, find and identify map features, look at tabular information about map features, and print out maps. The CD was designed to be easy to use and incorporates example maps as well as helpmore » sections describing the use of the environmental data on the CD, and introduces you to the IACP Viewer and its capabilities. These help features will make it easy for you to conduct analysis, produce maps, and browse the IACP Plan. The IACP data are included in two formats: shapefiles, which can be viewed with the IACP Viewer or ESRI`s ArcView software (Version 2.1 or higher), and ARC/INFO export files, which can be imported into ARC/INFO or converted to other GIS data formats. Point Data Sources: Sensitive Areas, Surface Drinking Water Intakes, Groundwater Intakes, Groundwater Supply Facilities, NPL (National Priority List) Sites, FRP (Facility Response Plan) Facilities, NPDES (National Pollutant Discharge Elimination System) Facilities, Hospitals, RCRA (Resource Conservation and Recovery Act) Sites, TRI (Toxic Release Inventory) Sites, CERCLA (Comprehensive Environmental Response, Compensation, and Liability Act) Sites Line Data Sources: TIGER Roads, TIGER Railroads, TIGER Hydrography, Pipelines Polygon Data Sources: State Boundaries, County Boundaries, Watershed Boundaries (8-digit HUC), TIGER Hydrography, Public Lands, Populated Places, IACP Boundaries, Coast Guard Boundaries, Forest Types, US Congressional Districts, One-half Mile Buffer of Surface Drinking Water Intakes.« less

  10. Inland area contingency plan and maps for Virginia (on CD-ROM). Data file

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    1996-12-01

    EPA Region III has assembled on this CD a multitude of environmental data, in both visual and textual formats. While targeted for Facility Response Planning under the Oil Pollution Act of 1990, this information will prove helpful to anyone in the environmental arena. Specifically, the CD will aid contingency planning and emergency response personnel. Combining innovative GIS technology with EPA`s state-specific data allows you to display maps, find and identify map features, look at tabular information about map features, and print out maps. The CD was designed to be easy to use and incorporates example maps as well as helpmore » sections describing the use of the environmental data on the CD, and introduces you to the IACP Viewer and its capabilities. These help features will make it easy for you to conduct analysis, produce maps, and browse the IACP Plan. The IACP data are included in two formats: shapefiles, which can be viewed with the IACP Viewer or ESRI`s ArcView software (Version 2.1 or higher), and ARC/INFO export files, which can be imported into ARC/INFO or converted to other GIS data formats. Point Data Sources: Sensitive Areas, Surface Drinking Water Intakes, Groundwater Intakes, Groundwater Supply Facilities, NPL (National Priority List) Sites, FRP (Facility Response Plan) Facilities, NPDES (National Pollutant Discharge Elimination System) Facilities, Hospitals, RCRA (Resource Conservation and Recovery Act) Sites, TRI (Toxic Release Inventory) Sites, CERCLA (Comprehensive Environmental Response, Compensation, and Liability Act) Sites Line Data Sources: TIGER Roads, TIGER Railroads, TIGER Hydrography, Pipelines Polygon Data Sources: State Boundaries, County Boundaries, Watershed Boundaries (8-digit HUC), TIGER Hydrography, Public Lands, Populated Places, IACP Boundaries, Coast Guard Boundaries, Forest Types, US Congressional Districts, One-half Mile Buffer of Surface Drinking Water Intakes.« less

  11. Spatially-Resolved Influence of Temperature and Salinity on Stock and Recruitment Variability of Commercially Important Fishes in the North Sea

    PubMed Central

    Akimova, Anna; Núñez-Riboni, Ismael; Kempf, Alexander; Taylor, Marc H.

    2016-01-01

    Understanding of the processes affecting recruitment of commercially important fish species is one of the major challenges in fisheries science. Towards this aim, we investigated the relation between North Sea hydrography (temperature and salinity) and fish stock variables (recruitment, spawning stock biomass and pre-recruitment survival index) for 9 commercially important fishes using spatially-resolved cross-correlation analysis. We used high-resolution (0.2° × 0.2°) hydrographic data fields matching the maximal temporal extent of the fish population assessments (1948–2013). Our approach allowed for the identification of regions in the North Sea where environmental variables seem to be more influential on the fish stocks, as well as the regions of a lesser or nil influence. Our results confirmed previously demonstrated negative correlations between temperature and recruitment of cod and plaice and identified regions of the strongest correlations (German Bight for plaice and north-western North Sea for cod). We also revealed a positive correlation between herring spawning stock biomass and temperature in the Orkney-Shetland area, as well as a negative correlation between sole pre-recruitment survival index and temperature in the German Bight. A strong positive correlation between sprat stock variables and salinity in the central North Sea was also found. To our knowledge the results concerning correlations between North Sea hydrography and stocks’ dynamics of herring, sole and sprat are novel. The new information about spatial distribution of the correlation provides an additional help to identify mechanisms underlying these correlations. As an illustration of the utility of these results for fishery management, an example is provided that incorporates the identified environmental covariates in stock-recruitment models. PMID:27584155

  12. A hierarchical network-based algorithm for multi-scale watershed delineation

    NASA Astrophysics Data System (ADS)

    Castronova, Anthony M.; Goodall, Jonathan L.

    2014-11-01

    Watershed delineation is a process for defining a land area that contributes surface water flow to a single outlet point. It is a commonly used in water resources analysis to define the domain in which hydrologic process calculations are applied. There has been a growing effort over the past decade to improve surface elevation measurements in the U.S., which has had a significant impact on the accuracy of hydrologic calculations. Traditional watershed processing on these elevation rasters, however, becomes more burdensome as data resolution increases. As a result, processing of these datasets can be troublesome on standard desktop computers. This challenge has resulted in numerous works that aim to provide high performance computing solutions to large data, high resolution data, or both. This work proposes an efficient watershed delineation algorithm for use in desktop computing environments that leverages existing data, U.S. Geological Survey (USGS) National Hydrography Dataset Plus (NHD+), and open source software tools to construct watershed boundaries. This approach makes use of U.S. national-level hydrography data that has been precomputed using raster processing algorithms coupled with quality control routines. Our approach uses carefully arranged data and mathematical graph theory to traverse river networks and identify catchment boundaries. We demonstrate this new watershed delineation technique, compare its accuracy with traditional algorithms that derive watershed solely from digital elevation models, and then extend our approach to address subwatershed delineation. Our findings suggest that the open-source hierarchical network-based delineation procedure presented in the work is a promising approach to watershed delineation that can be used summarize publicly available datasets for hydrologic model input pre-processing. Through our analysis, we explore the benefits of reusing the NHD+ datasets for watershed delineation, and find that the our technique offers greater flexibility and extendability than traditional raster algorithms.

  13. Circulation and fjord-shelf exchange during the ice-covered period in Young Sound-Tyrolerfjord, Northeast Greenland (74°N)

    NASA Astrophysics Data System (ADS)

    Boone, W.; Rysgaard, S.; Kirillov, S.; Dmitrenko, I.; Bendtsen, J.; Mortensen, J.; Meire, L.; Petrusevich, V.; Barber, D. G.

    2017-07-01

    Fjords around Greenland connect the Greenland Ice Sheet to the ocean and their hydrography and circulation are determined by the interplay between atmospheric forcing, runoff, topography, fjord-shelf exchange, tides, waves, and seasonal growth and melt of sea ice. Limited knowledge exists on circulation in high-Arctic fjords, particularly those not impacted by tidewater glaciers, and especially during winter, when they are covered with sea-ice and freshwater input is low. Here, we present and analyze seasonal observations of circulation, hydrography and cross-sill exchange of the Young Sound-Tyrolerfjord system (74°N) in Northeast Greenland. Distinct seasonal circulation phases are identified and related to polynya activity, meltwater and inflow of coastal water masses. Renewal of basin water in the fjord is a relatively slow process that modifies the fjord water masses on a seasonal timescale. By the end of winter, there is two-layer circulation, with outflow in the upper 45 m and inflow extending down to approximately 150 m. Tidal analysis showed that tidal currents above the sill were almost barotropic and dominated by the M2 tidal constituent (0.26 m s-1), and that residual currents (∼0.02 m s-1) were relatively small during the ice-covered period. Tidal pumping, a tidally driven fjord-shelf exchange mechanism, drives a salt flux that is estimated to range between 145 kg s-1 and 603 kg s-1. Extrapolation of these values over the ice-covered period indicates that tidal pumping is likely a major source of dense water and driver of fjord circulation during the ice-covered period.

  14. Basin-scale variability in plankton biomass and community metabolism in the sub-tropical North Atlantic Ocean

    NASA Astrophysics Data System (ADS)

    Harrison, W. G.; Arístegui, J.; Head, E. J. H.; Li, W. K. W.; Longhurst, A. R.; Sameoto, D. D.

    Three trans-Atlantic oceanographic surveys (Nova Scotia to Canary Islands) were carried out during fall 1992 and spring 1993 to describe the large-scale variability in hydrographic, chemical and biological properties of the upper water column of the subtropical gyre and adjacent waters. Significant spatial and temporal variability characterized a number of the biological pools and rate processes whereas others were relatively invariant. Systematic patterns were observed in the zonal distribution of some properties. Most notable were increases (eastward) in mixed-layer temperature and salinity, depths of the nitracline and chlorophyll- a maximum, regenerated production (NH 4 uptake) and bacterial production. Dissolved inorganic carbon (DIC) concentrations, phytoplankton biomass, mesozooplankton biomass and new production (NO 3 uptake) decreased (eastward). Bacterial biomass, primary production, and community respiration exhibited no discernible zonal distribution patterns. Seasonal variability was most evident in hydrography (cooler/fresher mixed-layer in spring), and chemistry (mixed-layer DIC concentration higher and nitracline shallower in spring) although primary production and bacterial production were significantly higher in spring than in fall. In general, seasonal variability was greater in the west than in the east; seasonality in most properties was absent west of Canary Islands (˜20°W). The distribution of autotrophs could be reasonably well explained by hydrography and nutrient structure, independent of location or season. Processes underlying the distribution of the microheterophs, however, were less clear. Heterotrophic biomass and metabolism was less variable than autotrophs and appeared to dominate the upper ocean carbon balance of the subtropical North Atlantic in both fall and spring. Geographical patterns in distribution are considered in the light of recent efforts to partition the ocean into distinct "biogeochemical provinces".

  15. Comparison of simple sequence repeats in 19 Archaea.

    PubMed

    Trivedi, S

    2006-12-05

    All organisms that have been studied until now have been found to have differential distribution of simple sequence repeats (SSRs), with more SSRs in intergenic than in coding sequences. SSR distribution was investigated in Archaea genomes where complete chromosome sequences of 19 Archaea were analyzed with the program SPUTNIK to find di- to penta-nucleotide repeats. The number of repeats was determined for the complete chromosome sequences and for the coding and non-coding sequences. Different from what has been found for other groups of organisms, there is an abundance of SSRs in coding regions of the genome of some Archaea. Dinucleotide repeats were rare and CG repeats were found in only two Archaea. In general, trinucleotide repeats are the most abundant SSR motifs; however, pentanucleotide repeats are abundant in some Archaea. Some of the tetranucleotide and pentanucleotide repeat motifs are organism specific. In general, repeats are short and CG-rich repeats are present in Archaea having a CG-rich genome. Among the 19 Archaea, SSR density was not correlated with genome size or with optimum growth temperature. Pentanucleotide density had an inverse correlation with the CG content of the genome.

  16. Simple sequence repeat marker loci discovery using SSR primer.

    PubMed

    Robinson, Andrew J; Love, Christopher G; Batley, Jacqueline; Barker, Gary; Edwards, David

    2004-06-12

    Simple sequence repeats (SSRs) have become important molecular markers for a broad range of applications, such as genome mapping and characterization, phenotype mapping, marker assisted selection of crop plants and a range of molecular ecology and diversity studies. With the increase in the availability of DNA sequence information, an automated process to identify and design PCR primers for amplification of SSR loci would be a useful tool in plant breeding programs. We report an application that integrates SPUTNIK, an SSR repeat finder, with Primer3, a PCR primer design program, into one pipeline tool, SSR Primer. On submission of multiple FASTA formatted sequences, the script screens each sequence for SSRs using SPUTNIK. The results are parsed to Primer3 for locus-specific primer design. The script makes use of a Web-based interface, enabling remote use. This program has been written in PERL and is freely available for non-commercial users by request from the authors. The Web-based version may be accessed at http://hornbill.cspp.latrobe.edu.au/

  17. Digital repeat analysis; setup and operation.

    PubMed

    Nol, J; Isouard, G; Mirecki, J

    2006-06-01

    Since the emergence of digital imaging, there have been questions about the necessity of continuing reject analysis programs in imaging departments to evaluate performance and quality. As a marketing strategy, most suppliers of digital technology focus on the supremacy of the technology and its ability to reduce the number of repeats, resulting in less radiation doses given to patients and increased productivity in the department. On the other hand, quality assurance radiographers and radiologists believe that repeats are mainly related to positioning skills, and repeat analysis is the main tool to plan training needs to up-skill radiographers. A comparative study between conventional and digital imaging was undertaken to compare outcomes and evaluate the need for reject analysis. However, digital technology still being at its early development stages, setting a credible reject analysis program became the major task of the study. It took the department, with the help of the suppliers of the computed radiography reader and the picture archiving and communication system, over 2 years of software enhancement to build a reliable digital repeat analysis system. The results were supportive of both philosophies; the number of repeats as a result of exposure factors was reduced dramatically; however, the percentage of repeats as a result of positioning skills was slightly on the increase for the simple reason that some rejects in the conventional system qualifying for both exposure and positioning errors were classified as exposure error. The ability of digitally adjusting dark or light images reclassified some of those images as positioning errors.

  18. System and method of detecting cavitation in pumps

    DOEpatents

    Lu, Bin; Sharma, Santosh Kumar; Yan, Ting; Dimino, Steven A.

    2017-10-03

    A system and method for detecting cavitation in pumps for fixed and variable supply frequency applications is disclosed. The system includes a controller having a processor programmed to repeatedly receive real-time operating current data from a motor driving a pump, generate a current frequency spectrum from the current data, and analyze current data within a pair of signature frequency bands of the current frequency spectrum. The processor is further programmed to repeatedly determine fault signatures as a function of the current data within the pair of signature frequency bands, repeatedly determine fault indices based on the fault signatures and a dynamic reference signature, compare the fault indices to a reference index, and identify a cavitation condition in a pump based on a comparison between the reference index and a current fault index.

  19. Maps and geospatial data for the Shorty’s Island and Myrtle Bend substrate enhancement pilot projects, Kootenai River near Bonners Ferry, Idaho, 2014

    USGS Publications Warehouse

    Fosness, Ryan L.

    2014-01-01

    This report presents the methods used to develop georeferenced portable document format maps and geospatial data that describe spawning locations and physical habitat characteristics (including egg mat locations, bathymetry, surficial sediment facies, and streamflow velocity) within the substrate enhancement pilot project study area. The results are presented as two maps illustrating the physical habitat characteristics along with proposed habitat enhancement areas, aerial imagery, and hydrography. The results of this study will assist researchers, policy makers, and management agencies in deciding the spatial location and extent of the substrate enhancement pilot project.

  20. Unified Ecoregions of Alaska: 2001

    USGS Publications Warehouse

    Nowacki, Gregory J.; Spencer, Page; Fleming, Michael; Brock, Terry; Jorgenson, Torre

    2003-01-01

    Major ecosystems have been mapped and described for the State of Alaska and nearby areas. Ecoregion units are based on newly available datasets and field experience of ecologists, biologists, geologists and regional experts. Recently derived datasets for Alaska included climate parameters, vegetation, surficial geology and topography. Additional datasets incorporated in the mapping process were lithology, soils, permafrost, hydrography, fire regime and glaciation. Thirty two units are mapped using a combination of the approaches of Bailey (hierarchial), and Omernick (integrated). The ecoregions are grouped into two higher levels using a 'tri-archy' based on climate parameters, vegetation response and disturbance processes. The ecoregions are described with text, photos and tables on the published map.

  1. Bully Prevention, Peer Mediation and Conflict Resolution: Impact of Prevention Programs on Reducing School Suspensions

    ERIC Educational Resources Information Center

    Frost, Alice M.

    2012-01-01

    Previous research examined various factors of program design, specific program curriculum, and student and faculty attitudes, but repeated studies and methodology questions have been raised with some of the research. Much of the research in the field has examined specific program effectiveness where the researcher is the author of the program or…

  2. An exploration of risk for recurrent falls in two geriatric care settings

    PubMed Central

    2013-01-01

    Background Fall events were examined in two distinct geriatric populations to identify factors associated with repeat fallers, and to examine whether patients who use gait aids, specifically a walker, were more likely to experience repeat falls. Each unit already had a generic program for falls prevention in place. Methods Secondary data analysis was conducted on information collected during the pilot testing of a new quality assurance Incident Reporting Tool between October 2006 and September 2008. The study settings included an in-patient geriatric rehabilitation unit (GRU) and a long stay veterans’ unit (LSVU) in a rehabilitation and long-stay hospital in Ontario. Participants were two hundred and twenty three individuals, aged 65 years or older on these two units, who experienced one or more fall incidents during the study period. Results Logistic regression analyses showed that on the GRU age was significantly associated with repeat falls. On the LSVU first falls in the morning or late evening were associated with repeat falling. Walker as a gait aid listed at time of first fall was not associated with repeat falls. Conclusions This study suggests that different intervention may be necessary in different geriatric settings to identify, for secondary prevention, certain individuals for which the generic programs prove inadequate. Information collection with a specific focus on the issue of repeat falls may be necessary for greater insight. PMID:24106879

  3. A Suggested Automated Branch Program for Foreign Languages.

    ERIC Educational Resources Information Center

    Barrutia, Richard

    1964-01-01

    Completely automated and operated by student feedback, this program teaches and tests foreign language recognition and retention, gives repeated audiolingual practice on model structures, and allows the student to tailor the program to his individual needs. The program is recorded on four tape tracks (track 1 for the most correct answer, etc.).…

  4. 40 CFR 123.63 - Criteria for withdrawal of State programs.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... withdrawal of State programs. (a) In the case of a sewage sludge management program, references in this... under this part, including failure to issue permits; (ii) Repeated issuance of permits which do not... sludge management program, § 501.14 of this chapter). (5) Where the State fails to develop an adequate...

  5. An Attempt To Develop An "Intelligent" Lens Design Program

    NASA Astrophysics Data System (ADS)

    Viswanathan, V. K.; Bohachevsky, I. O.; Cotter, T. P.

    1986-02-01

    We are developing a lens design program intended to operate without user intervention, and to improve its performance with repeated usage. The methodology and current status will be discussed in this paper.

  6. Repeatability of Cryogenic Multilayer Insulation

    NASA Technical Reports Server (NTRS)

    Johnson, W. L.; Vanderlaan, M.; Wood, J. J.; Rhys, N. O.; Guo, W.; Van Sciver, S.; Chato, D. J.

    2017-01-01

    Due to the variety of requirements across aerospace platforms, and one off projects, the repeatability of cryogenic multilayer insulation has never been fully established. The objective of this test program is to provide a more basic understanding of the thermal performance repeatability of MLI systems that are applicable to large scale tanks. There are several different types of repeatability that can be accounted for: these include repeatability between multiple identical blankets, repeatability of installation of the same blanket, and repeatability of a test apparatus. The focus of the work in this report is on the first two types of repeatability. Statistically, repeatability can mean many different things. In simplest form, it refers to the range of performance that a population exhibits and the average of the population. However, as more and more identical components are made (i.e. the population of concern grows), the simple range morphs into a standard deviation from an average performance. Initial repeatability testing on MLI blankets has been completed at Florida State University. Repeatability of five GRC provided coupons with 25 layers was shown to be +/- 8.4 whereas repeatability of repeatedly installing a single coupon was shown to be +/- 8.0. A second group of 10 coupons have been fabricated by Yetispace and tested by Florida State University, through the first 4 tests, the repeatability has been shown to be +/- 16. Based on detailed statistical analysis, the data has been shown to be statistically significant.

  7. Repeatability of Cryogenic Multilayer Insulation

    NASA Technical Reports Server (NTRS)

    Johnson, W. L.; Vanderlaan, M.; Wood, J. J.; Rhys, N. O.; Guo, W.; Van Sciver, S.; Chato, D. J.

    2017-01-01

    Due to the variety of requirements across aerospace platforms, and one off projects, the repeatability of cryogenic multilayer insulation has never been fully established. The objective of this test program is to provide a more basic understanding of the thermal performance repeatability of MLI systems that are applicable to large scale tanks. There are several different types of repeatability that can be accounted for: these include repeatability between multiple identical blankets, repeatability of installation of the same blanket, and repeatability of a test apparatus. The focus of the work in this report is on the first two types of repeatability. Statistically, repeatability can mean many different things. In simplest form, it refers to the range of performance that a population exhibits and the average of the population. However, as more and more identical components are made (i.e. the population of concern grows), the simple range morphs into a standard deviation from an average performance. Initial repeatability testing on MLI blankets has been completed at Florida State University. Repeatability of five GRC provided coupons with 25 layers was shown to be +/- 8.4% whereas repeatability of repeatedly installing a single coupon was shown to be +/- 8.0%. A second group of 10 coupons have been fabricated by Yetispace and tested by Florida State University, through the first 4 tests, the repeatability has been shown to be +/- 15-25%. Based on detailed statistical analysis, the data has been shown to be statistically significant.

  8. Repeatability of Cryogenic Multilayer Insulation

    NASA Astrophysics Data System (ADS)

    Johnson, W. L.; Vanderlaan, M.; Wood, J. J.; Rhys, N. O.; Guo, W.; Van Sciver, S.; Chato, D. J.

    2017-12-01

    Due to the variety of requirements across aerospace platforms, and one off projects, the repeatability of cryogenic multilayer insulation (MLI) has never been fully established. The objective of this test program is to provide a more basic understanding of the thermal performance repeatability of MLI systems that are applicable to large scale tanks. There are several different types of repeatability that can be accounted for: these include repeatability between identical blankets, repeatability of installation of the same blanket, and repeatability of a test apparatus. The focus of the work in this report is on the first two types of repeatability. Statistically, repeatability can mean many different things. In simplest form, it refers to the range of performance that a population exhibits and the average of the population. However, as more and more identical components are made (i.e. the population of concern grows), the simple range morphs into a standard deviation from an average performance. Initial repeatability testing on MLI blankets has been completed at Florida State University. Repeatability of five Glenn Research Center (GRC) provided coupons with 25 layers was shown to be +/- 8.4% whereas repeatability of repeatedly installing a single coupon was shown to be +/- 8.0%. A second group of 10 coupons has been fabricated by Yetispace and tested by Florida State University, the repeatability between coupons has been shown to be +/- 15-25%. Based on detailed statistical analysis, the data has been shown to be statistically significant.

  9. Developing a Teaching Assistant Preparation Program in the School of Oceanography, University of Washington.

    ERIC Educational Resources Information Center

    McManus, Dean A.

    2002-01-01

    Reports on the development of a program preparing graduate students to teach in the School of Oceanography, University of Washington, in response to repeated graduate student complaints about the lack of a program. Describes the program which is based on surveys of groups affected by the program and research on teaching assistant preparation,…

  10. The Arboretum: A living laboratory

    Treesearch

    Constance I. Millar

    1977-01-01

    ...The Arboretum must be viable...the Arboretum must be dynamic, offering programs, new programs, and repeat programs, to share the knowledge that we have accumulated..." Francis Ching, Director, Los Angeles State and County Arboretum.¹ ¹Excerpt from: Proceedings of a Symposium: The Urban Arboretum in a Time of Crisis....

  11. Second-Grade Urban Learners: Preliminary Findings for a Computer-Assisted, Culturally Relevant, Repeated Reading Intervention

    ERIC Educational Resources Information Center

    Bennett, Jessica G.; Gardner, Ralph, III; Cartledge, Gwendolyn; Ramnath, Rajiv; Council, Morris R., III

    2017-01-01

    This study investigated the effects of a multicomponent, supplemental intervention on the reading fluency of second-grade African-American urban students who showed reading and special education risk. The packaged intervention combined repeated readings and culturally relevant stories, delivered through a novel computer software program to enhance…

  12. PERSISTENT EFFECTS OF REPEATED INHALATION OF TOLUENE: 4 WEEKS VS. 13 WEEKS.

    EPA Science Inventory

    Understanding and predicting the extent of neurotoxic damage from repeated exposure to volatile organic compounds (VOCs) is a problem for many EPA programs. Eighty adult, male Long-Evans rats inhaled toluene (0, 10, 100, or 1000 ppm) 6 hr/day, 5 days/week for 4 weeks in a systema...

  13. The CARIACO Ocean Time-Series: two decades of oceanographic observations to understand linkages between biogeochemistry, ecology, and long-term environmental variability.

    NASA Astrophysics Data System (ADS)

    Lorenzoni, L.; Muller-Karger, F. E.; Rueda-Roa, D. T.; Thunell, R.; Scranton, M. I.; Taylor, G. T.; benitez-Nelson, C. R.; Montes, E.; Astor, Y. M.; Rojas, J.

    2016-02-01

    The CARIACO Ocean Time-Series project, located in the Cariaco Basin off the coast of Venezuela, seeks to understand relationships between hydrography, primary production, community composition, microbial activity, particle fluxes, and element cycling in the water column, and how variations in these processes are preserved in sediments accumulating in this anoxic basin. CARIACO uses autonomous and shipboard measurements to understand ecological and biogeochemical changes and how these relate to regional and global climatic/ocean variability. CARIACO is a model for national ocean observing programs in Central/South America, and has been developed as a community facility platform with open access to all data (http://imars.marine.usf.edu/cariaco). Research resulting from this program has contributed to knowledge about the decomposition and cycling of particles, the biological pump, and to our understanding of the ecology and oceanography of oxygen minimum zones. Despite this basin being anoxic below 250m, remineralization rates of organic matter are comparable to those in well oxygenated waters. A dynamic microbial community significantly influences carbon and nutrient biogeochemical cycling throughout the water column. Since 1995, declining particulate organic carbon fluxes have been measured throughout the water column using sediment traps, likely in response to declining Chl-a concentrations and smaller phytoplankton which have replaced the larger taxa over the past decade. This community shift appears to be caused by regional changes in the physical regime. CARIACO also recorded marked long-term changes in surface and deep DIC in response to a combination of factors including surface water warming. The observations of CARIACO highlight the importance of a sustained, holistic approach to studying biodiversity, ecology and the marine carbon cycle to predict potential impacts of climate change on the ocean's ecosystem services and carbon sequestration efficiency.

  14. Feedback-controlled and programmed stretching of the ankle plantarflexors and dorsiflexors in stroke: effects of a 4-week intervention program.

    PubMed

    Selles, Ruud W; Li, Xiaoyan; Lin, Fang; Chung, Sun G; Roth, Elliot J; Zhang, Li-Qun

    2005-12-01

    To investigate the effect of repeated feedback-controlled and programmed "intelligent" stretching of the ankle plantar- and dorsiflexors to treat subjects with ankle spasticity and/or contracture in stroke. Noncontrolled trial. Institutional research center. Subjects with spasticity and/or contracture after stroke. Stretching of the plantar- and dorsiflexors of the ankle 3 times a week for 45 minutes during a 4-week period by using a feedback-controlled and programmed stretching device. Passive and active range of motion (ROM), muscle strength, joint stiffness, joint viscous damping, reflex excitability, comfortable walking speed, and subjective experiences of the subjects. Significant improvements were found in the passive ROM, maximum voluntary contraction, ankle stiffness, and comfortable walking speed. The visual analog scales indicated very positive subjective evaluation in terms of the comfort of stretching and the effect on their involved ankle. Repeated feedback-controlled or intelligent stretching had a positive influence on the joint properties of the ankle with spasticity and/or contracture after stroke. The stretching device may be an effective and safe alternative to manual passive motion treatment by a therapist and has potential to be used to repeatedly and regularly stretch the ankle of subjects with spasticity and/or contracture without daily involvement of clinicians or physical therapists.

  15. Effects of Plyometric Training and Beta-Alanine Supplementation on Maximal-Intensity Exercise and Endurance in Female Soccer Players

    PubMed Central

    Rosas, Fabián; Ramírez-Campillo, Rodrigo; Martínez, Cristian; Cañas-Jamet, Rodrigo; McCrudden, Emma; Meylan, Cesar; Moran, Jason; Nakamura, Fábio Y.; Pereira, Lucas A.; Loturco, Irineu; Diaz, Daniela; Izquierdo, Mikel

    2017-01-01

    Abstract Plyometric training and beta-alanine supplementation are common among soccer players, although its combined use had never been tested. Therefore, a randomized, double-blind, placebo-controlled trial was conducted to compare the effects of a plyometric training program, with or without beta-alanine supplementation, on maximal-intensity and endurance performance in female soccer players during an in-season training period. Athletes (23.7 ± 2.4 years) were assigned to either a plyometric training group receiving a placebo (PLACEBO, n = 8), a plyometric training group receiving beta-alanine supplementation (BA, n = 8), or a control group receiving placebo without following a plyometric training program (CONTROL, n = 9). Athletes were evaluated for single and repeated jumps and sprints, endurance, and change-of-direction speed performance before and after the intervention. Both plyometric training groups improved in explosive jumping (ES = 0.27 to 1.0), sprinting (ES = 0.31 to 0.78), repeated sprinting (ES = 0.39 to 0.91), 60 s repeated jumping (ES = 0.32 to 0.45), endurance (ES = 0.35 to 0.37), and change-of-direction speed performance (ES = 0.36 to 0.58), whereas no significant changes were observed for the CONTROL group. Nevertheless, compared to the CONTROL group, only the BA group showed greater improvements in endurance, repeated sprinting and repeated jumping performances. It was concluded that beta-alanine supplementation during plyometric training may add further adaptive changes related to endurance, repeated sprinting and jumping ability. PMID:28828081

  16. Effects of Plyometric Training and Beta-Alanine Supplementation on Maximal-Intensity Exercise and Endurance in Female Soccer Players.

    PubMed

    Rosas, Fabián; Ramírez-Campillo, Rodrigo; Martínez, Cristian; Caniuqueo, Alexis; Cañas-Jamet, Rodrigo; McCrudden, Emma; Meylan, Cesar; Moran, Jason; Nakamura, Fábio Y; Pereira, Lucas A; Loturco, Irineu; Diaz, Daniela; Izquierdo, Mikel

    2017-09-01

    Plyometric training and beta-alanine supplementation are common among soccer players, although its combined use had never been tested. Therefore, a randomized, double-blind, placebo-controlled trial was conducted to compare the effects of a plyometric training program, with or without beta-alanine supplementation, on maximal-intensity and endurance performance in female soccer players during an in-season training period. Athletes (23.7 ± 2.4 years) were assigned to either a plyometric training group receiving a placebo (PLACEBO, n = 8), a plyometric training group receiving beta-alanine supplementation (BA, n = 8), or a control group receiving placebo without following a plyometric training program (CONTROL, n = 9). Athletes were evaluated for single and repeated jumps and sprints, endurance, and change-of-direction speed performance before and after the intervention. Both plyometric training groups improved in explosive jumping (ES = 0.27 to 1.0), sprinting (ES = 0.31 to 0.78), repeated sprinting (ES = 0.39 to 0.91), 60 s repeated jumping (ES = 0.32 to 0.45), endurance (ES = 0.35 to 0.37), and change-of-direction speed performance (ES = 0.36 to 0.58), whereas no significant changes were observed for the CONTROL group. Nevertheless, compared to the CONTROL group, only the BA group showed greater improvements in endurance, repeated sprinting and repeated jumping performances. It was concluded that beta-alanine supplementation during plyometric training may add further adaptive changes related to endurance, repeated sprinting and jumping ability.

  17. Childhood Lead Poisoning: Developing Prevention Programs and Mobilizing Resources.

    ERIC Educational Resources Information Center

    Rochow, K. W. James

    The current approach to dealing with childhood lead poisoning has led to repeated diagnoses of poisoning because such children are treated and then returned to their hazardous environments. This handbook describes in detail the program requirements for effective childhood lead poisoning prevention programs at the local level based on the…

  18. Smoking Cessation Failure among Korean Adolescents

    ERIC Educational Resources Information Center

    Kim, Sung Reul; Kim, Hyun Kyung; Kim, Ji Young; Kim, Hye Young; Ko, Sung Hee; Park, Minyoung

    2016-01-01

    The aim of this study was to identify smoking cessation failure subgroups among Korean adolescents. Participants were 379 smoking adolescents who joined a smoking cessation program. A questionnaire and a cotinine urine test were administered before the program began. Three months after the program ended, the cotinine urine test was repeated. A…

  19. A Web-Based Decision Support System for Assessing Regional Water-Quality Conditions and Management Actions

    NASA Astrophysics Data System (ADS)

    Booth, N. L.; Everman, E.; Kuo, I.; Sprague, L.; Murphy, L.

    2011-12-01

    A new web-based decision support system has been developed as part of the U.S. Geological Survey (USGS) National Water Quality Assessment Program's (NAWQA) effort to provide ready access to Spatially Referenced Regressions On Watershed attributes (SPARROW) results of stream water-quality conditions and to offer sophisticated scenario testing capabilities for research and water-quality planning via an intuitive graphical user interface with a map-based display. The SPARROW Decision Support System (DSS) is delivered through a web browser over an Internet connection, making it widely accessible to the public in a format that allows users to easily display water-quality conditions, distribution of nutrient sources, nutrient delivery to downstream waterbodies, and simulations of altered nutrient inputs including atmospheric and agricultural sources. The DSS offers other features for analysis including various background map layers, model output exports, and the ability to save and share prediction scenarios. SPARROW models currently supported by the DSS are based on the modified digital versions of the 1:500,000-scale River Reach File (RF1) and 1:100,000-scale National Hydrography Dataset (medium-resolution, NHDPlus) stream networks. The underlying modeling framework and server infrastructure illustrate innovations in the information technology and geosciences fields for delivering SPARROW model predictions over the web by performing intensive model computations and map visualizations of the predicted conditions within the stream network.

  20. A Web-Based Decision Support System for Assessing Regional Water-Quality Conditions and Management Actions

    USGS Publications Warehouse

    Booth, N.L.; Everman, E.J.; Kuo, I.-L.; Sprague, L.; Murphy, L.

    2011-01-01

    The U.S. Geological Survey National Water Quality Assessment Program has completed a number of water-quality prediction models for nitrogen and phosphorus for the conterminous United States as well as for regional areas of the nation. In addition to estimating water-quality conditions at unmonitored streams, the calibrated SPAtially Referenced Regressions On Watershed attributes (SPARROW) models can be used to produce estimates of yield, flow-weighted concentration, or load of constituents in water under various land-use condition, change, or resource management scenarios. A web-based decision support infrastructure has been developed to provide access to SPARROW simulation results on stream water-quality conditions and to offer sophisticated scenario testing capabilities for research and water-quality planning via a graphical user interface with familiar controls. The SPARROW decision support system (DSS) is delivered through a web browser over an Internet connection, making it widely accessible to the public in a format that allows users to easily display water-quality conditions and to describe, test, and share modeled scenarios of future conditions. SPARROW models currently supported by the DSS are based on the modified digital versions of the 1:500,000-scale River Reach File (RF1) and 1:100,000-scale National Hydrography Dataset (medium-resolution, NHDPlus) stream networks. ?? 2011 American Water Resources Association. This article is a U.S. Government work and is in the public domain in the USA.

  1. Anomalous δ13C in POC at the chemoautotrophy maximum in the Cariaco Basin

    NASA Astrophysics Data System (ADS)

    Scranton, M. I.; Taylor, G. T.; Thunell, R.; Tappa, E.; benitez-Nelson, C. R.; Muller-Karger, F. E.; Lorenzoni, L.; Astor, Y. M.

    2016-02-01

    The Cariaco Basin is the world's largest truly marine, permanently anoxic basin and is located on the continental shelf of Venezuela which experiences strong seasonal upwelling. The CARIACO program has been studying the hydrography, biogeochemistry and properties of sinking flux of the Cariaco Basin since 1995. One of the major puzzles of CARIACO has been the nature of the chemoautotrophic maximum which is seen at depths just below the appearance of hydrogen sulfide ( 250-300 m). The identity and sources of oxidants and reductants to this active microbial community, and the identity of the chemoautotrophic organisms themselves, are still only partially known. Below about 50m (the euphotic zone), δ13C values of suspended particulates range from -23 to -26‰, typical of marine phytoplankton. However we have observed both enrichments (values of up to -16‰) and depletions (values of -28‰) near the redox interface. We had expected to see isotopically light POC in the chemoautotrophy maximum, since DIC δ13C should decrease with depth as organic carbon is remineralized. However both positive and negative isotopic excursions in POC occur at depths where dark carbon fixation is at a maximum, and at or near the transition from micro-oxic to sulfidic water. We postulate that this signal may help to define carbon fixation pathways (and dominant chemoautotrophic populations) in the oxic/sulfidic transition region.

  2. Out of sight, out of mind: Do repeating students overlook online course components?

    PubMed

    Holland, Jane; Clarke, Eric; Glynn, Mark

    2016-11-01

    E-Learning is becoming an integral part of undergraduate medicine, with many curricula incorporating a number of online activities and resources, in addition to more traditional teaching methods. This study examines physical attendance, online activity, and examination outcomes in a first-year undergraduate medical program. All 358 students who completed the Alimentary System module within the first semester of the program were included, 30 of whom were repeating the year, and thus the module. This systems-based, multidisciplinary module incorporated didactic lectures, cadaveric small group tutorials and additional e-Learning resources such as online histology tutorials. Significant differences were demonstrated in physical attendance and utilization of online resources between repeating students and those participating in the module for the first time. Subsequent analyses confirmed that physical attendance, access of online lecture resources, and utilization of online histology tutorials were all significantly correlated. In addition, both physical attendance and utilization of online resources significantly correlated with summative examination performance. While nonattendance may be due to a variety of factors, our data confirm that significant differences exist in both physical attendance and online activity between new entrants and repeating students, such that all students repeating a module or academic year should be routinely interviewed and offered appropriate supports to ensure that they continue to engage with the program. While the development of complex algorithmic models may be resource intensive, using readily available indices from virtual learning environments is a straightforward, albeit less powerful, means to identify struggling students prior to summative examinations. Anat Sci Educ 9: 555-564. © 2016 American Association of Anatomists. © 2016 American Association of Anatomists.

  3. Impact of Repeatedly Failing a High School Exit Exam: Voices of English Language Learners

    ERIC Educational Resources Information Center

    Kruger, Louis J.; Li, Chieh; Kimble, Edward; Ruah, Rachel; Stoianov, Diana; Krishnan, Kalyani

    2016-01-01

    This qualitative study explored the perceived psychological impact of repeated failures on a high school exit examination (HSEE). We interviewed eight self-identified English language learners (ELLs), whose ages ranged from 20 to 29. All participants were attending tutoring HSEE programs at urban community colleges in New England. Using a modified…

  4. Impact of Counseling on Repeated Unplanned Pregnancy and Contraceptive Behavior in Low SES Abortion Population.

    ERIC Educational Resources Information Center

    Burnhill, Michael S.; And Others

    High numbers of repeat abortions at a medical school clinic prompted clinic personnel to develop an experimental fertility control counseling program. Counseling objectives included the following: (1) to engender rapport and trust; (2) to assess the patient's past contraceptive use and psychosocial history; (3) to improve patient's knowledge of…

  5. Biological-Physical Coupling in the Gulf of Maine: Satellite and Model Studies of Phytoplankton Variability

    NASA Technical Reports Server (NTRS)

    Thomas, Andrew C.; Chai, F.; Townsend, D. W.; Xue, H.

    2002-01-01

    The goals of this project were to acquire, process, QC, archive and analyze SeaWiFS chlorophyll fields over the Gulf of Maine and Scotia Shelf region. The focus of the analysis effort was to calculate and quantify seasonality and interannual. variability of SeaWiFS-measured phytoplankton biomass in the study area and compare these to physical forcing and hydrography. An additional focus within this effort was on regional differences within the heterogeneous biophysical regions of the Gulf of Maine / Scotia Shelf. Overall goals were approached through the combined use of SeaWiFS and AVHRR data and the development of a coupled biology-physical numerical model.

  6. The diel migrations and distributions within a mesopelagic community in the North East Atlantic. 7. Siphonophores

    NASA Astrophysics Data System (ADS)

    Pugh, P. R.

    Siphonophores are by far the dominant macroplanktonic-micronektonic taxon of animals present in the 48 hr series of samples as a whole. A total of 35 species were identified, with four of these making up over 90% of the total numbers. Details of how the siphonophore population was estimated are discussed, but few species underwent clear cut diel vertical migration although there was considerable variability in their distributions over the sampling periods. The hydrography of the sampling area was investigated in relation to its possible effects on the faunal assemblages, and the important role of siphonophores as carnivores in the planktonic food chain was discussed.

  7. A numerical study of the ex-ROFI of the Colorado River

    NASA Astrophysics Data System (ADS)

    Carbajal, N.; Souza, A.; Durazo, R.

    1997-08-01

    The freshwater discharge of the Colorado River into the Gulf of California has been reduced to negligible quantities since the construction of the Hoover Dam in 1935. These radical anthropogenic changes in the hydrography of the Colorado River Delta had striking repercussions on both physical and biological processes. Using historical river discharge data, the changes in the flow dynamics and hydrographic patterns before and after the drastic freshwater reduction are studied numerically, using a three-dimensional nonlinear shelf model. The results are applied to assess the environmental impact of the reduction of river discharge on the area. Satellite imagery is also used to compare our results with observed fronts.

  8. REPPER—repeats and their periodicities in fibrous proteins

    PubMed Central

    Gruber, Markus; Söding, Johannes; Lupas, Andrei N.

    2005-01-01

    REPPER (REPeats and their PERiodicities) is an integrated server that detects and analyzes regions with short gapless repeats in protein sequences or alignments. It finds periodicities by Fourier Transform (FTwin) and internal similarity analysis (REPwin). FTwin assigns numerical values to amino acids that reflect certain properties, for instance hydrophobicity, and gives information on corresponding periodicities. REPwin uses self-alignments and displays repeats that reveal significant internal similarities. Both programs use a sliding window to ensure that different periodic regions within the same protein are detected independently. FTwin and REPwin are complemented by secondary structure prediction (PSIPRED) and coiled coil prediction (COILS), making the server a versatile analysis tool for sequences of fibrous proteins. REPPER is available at . PMID:15980460

  9. Rapidly deployable emergency communication system

    DOEpatents

    Gladden, Charles A.; Parelman, Martin H.

    1979-01-01

    A highly versatile, highly portable emergency communication system which permits deployment in a very short time to cover both wide areas and distant isolated areas depending upon mission requirements. The system employs a plurality of lightweight, fully self-contained repeaters which are deployed within the mission area to provide communication between field teams, and between each field team and a mobile communication control center. Each repeater contains a microcomputer controller, the program for which may be changed from the control center by the transmission of digital data within the audible range (300-3,000 Hz). Repeaters are accessed by portable/mobile transceivers, other repeaters, and the control center through the transmission and recognition of digital data code words in the subaudible range.

  10. Examining the Feasibility and Acceptability of a Motivational Interviewing Early Intervention Program to Prevent High School Dropout

    ERIC Educational Resources Information Center

    Iachini, Aidyn L.; Rogelberg, Sandra; Terry, John David; Lutz, Amy

    2016-01-01

    This article describes Aspire, a new motivational interviewing (MI) early intervention program designed to prevent dropout among students repeating the ninth grade, and then examines the feasibility and acceptability of this program through a mixed-methods approach. The Aspire program is a nine-lesson curriculum grounded in MI with an emphasis on…

  11. QueTAL: a suite of tools to classify and compare TAL effectors functionally and phylogenetically

    PubMed Central

    Pérez-Quintero, Alvaro L.; Lamy, Léo; Gordon, Jonathan L.; Escalon, Aline; Cunnac, Sébastien; Szurek, Boris; Gagnevin, Lionel

    2015-01-01

    Transcription Activator-Like (TAL) effectors from Xanthomonas plant pathogenic bacteria can bind to the promoter region of plant genes and induce their expression. DNA-binding specificity is governed by a central domain made of nearly identical repeats, each determining the recognition of one base pair via two amino acid residues (a.k.a. Repeat Variable Di-residue, or RVD). Knowing how TAL effectors differ from each other within and between strains would be useful to infer functional and evolutionary relationships, but their repetitive nature precludes reliable use of traditional alignment methods. The suite QueTAL was therefore developed to offer tailored tools for comparison of TAL effector genes. The program DisTAL considers each repeat as a unit, transforms a TAL effector sequence into a sequence of coded repeats and makes pair-wise alignments between these coded sequences to construct trees. The program FuncTAL is aimed at finding TAL effectors with similar DNA-binding capabilities. It calculates correlations between position weight matrices of potential target DNA sequence predicted from the RVD sequence, and builds trees based on these correlations. The programs accurately represented phylogenetic and functional relationships between TAL effectors using either simulated or literature-curated data. When using the programs on a large set of TAL effector sequences, the DisTAL tree largely reflected the expected species phylogeny. In contrast, FuncTAL showed that TAL effectors with similar binding capabilities can be found between phylogenetically distant taxa. This suite will help users to rapidly analyse any TAL effector genes of interest and compare them to other available TAL genes and should improve our understanding of TAL effectors evolution. It is available at http://bioinfo-web.mpl.ird.fr/cgi-bin2/quetal/quetal.cgi. PMID:26284082

  12. Distress identification manual for the long-term pavement performance program (Fifth revised edition)

    DOT National Transportation Integrated Search

    2014-05-01

    Accurate, consistent, and repeatable distress evaluation surveys can be performed by using the Distress Identification Manual for the Long-Term Pavement Performance Program. Color photographs and drawings illustrate the distresses found in three basi...

  13. Effects of repeated walking in a perturbing environment: a 4-day locomotor learning study.

    PubMed

    Blanchette, Andreanne; Moffet, Helene; Roy, Jean-Sébastien; Bouyer, Laurent J

    2012-07-01

    Previous studies have shown that when subjects repeatedly walk in a perturbing environment, initial movement error becomes smaller, suggesting that retention of the adapted locomotor program occurred (learning). It has been proposed that the newly learned locomotor program may be stored separately from the baseline program. However, how locomotor performance evolves with repeated sessions of walking with the perturbation is not yet known. To address this question, 10 healthy subjects walked on a treadmill on 4 consecutive days. Each day, locomotor performance was measured using kinematics and surface electromyography (EMGs), before, during, and after exposure to a perturbation, produced by an elastic tubing that pulled the foot forward and up during swing, inducing a foot velocity error in the first strides. Initial movement error decreased significantly between days 1 and 2 and then remained stable. Associated changes in medial hamstring EMG activity stabilized only on day 3, however. Aftereffects were present after perturbation removal, suggesting that daily adaptation involved central command recalibration of the baseline program. Aftereffects gradually decreased across days but were still visible on day 4. Separation between the newly learned and baseline programs may take longer than suggested by the daily improvement in initial performance in the perturbing environment or may never be complete. These results therefore suggest that reaching optimal performance in a perturbing environment should not be used as the main indicator of a completed learning process, as central reorganization of the motor commands continues days after initial performance has stabilized.

  14. Impact of an Adlerian Based Pretrial Diversion Program: Self Concept and Dissociation

    ERIC Educational Resources Information Center

    Norvell, Jeanell J.

    2010-01-01

    Clients' self concepts and dissociative experiences were examined to determine the impact of an Adlerian based pretrial diversion program. Clients completing the program displayed a significant change in self concepts and dissociative experiences. A repeated measures multivariate analysis of variance indicated a 35% change, made up of the…

  15. Development of an Evidence-Based Reading Fluency Program for Adult Literacy Learners

    ERIC Educational Resources Information Center

    Shore, Jane; Sabatini, John; Lentini, Jennifer; Holtzman, Steven; McNeil, Adjua

    2015-01-01

    Fluency is an essential part of skilled reading that has only recently begun to receive its deserved attention. However, programs that meaningfully engage adult learners in fluency training have not been widely explored in research. In this article, the authors describe an evidence-based adult Guided Repeated Reading program developed for…

  16. 40 CFR 141.211 - Special notice for repeated failure to conduct monitoring of the source water for Cryptosporidium...

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 40 Protection of Environment 23 2014-07-01 2014-07-01 false Special notice for repeated failure to conduct monitoring of the source water for Cryptosporidium and for failure to determine bin classification or mean Cryptosporidium level. 141.211 Section 141.211 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) WATER PROGRAMS ...

  17. Characteristics of upper extremity's muscle strength in Turkish national wheelchair basketball players team.

    PubMed

    Akınoğlu, Bihter; Kocahan, Tuğba

    2017-02-01

    The objective of this study was to reveal characteristics of muscle strength of upper extremities of wheelchair (WC) basketball players and to ensure more-specific training program preparation. Isokinetic muscle strength of 12 WC basketball players were assessed by ISOMED 2000 device. The assessment protocol was evaluated at 60°/sec velocity with 5 times repeated force and at 240°/sec with 15 times repeated force. This protocol was carried out individually for shoulder flexion-extension and wrist flexion-extension movements at the right and left extremities. The flexion/extension ratio was determined to be outside of the ratios accepted as normal for primarily shoulder joint and for wrist joint. The extension movement was stronger than flexion movement in the shoulders at both velocities and the flexion movement was stronger than ex-tension movement in the wrist. The repeat times where the peak torque occurred were 2-3 repeats at 60°/sec velocity during flexion and extension movements for the wrist and shoulders, and the peak torque occurred at an average of 5-6 repeats in the shoulders at 240°/sec velocity and it occurred at 3-4 repeats in the wrist. The angles where the peak torque of the shoulder flexion and extension occurred varied between 80°-115° at both velocities, and it varied between 5°-30° angles for the wrist. As this study revealed, determination of muscle strength characteristics of WC athletes and especially using objective isokinetic devices will guide the planning of the appropriate training and exercise programs and preventing sports injuries in long term.

  18. A randomized trial of motivational interviewing and facilitated contraceptive access to prevent rapid repeat pregnancy among adolescent mothers.

    PubMed

    Stevens, Jack; Lutz, Robyn; Osuagwu, Ngozi; Rotz, Dana; Goesling, Brian

    2017-10-01

    Most interventions designed to reduce teen pregnancy rates have not focused on pregnant and/or parenting adolescents. Therefore, a large randomized controlled trial was conducted regarding a motivational interviewing program entitled Teen Options to Prevent Pregnancy in a low-income sample of adolescent mothers. This program recommended monthly sessions between a participant and a registered nurse over 18 months. This program also featured facilitated birth control access through transportation assistance and a part-time contraceptive clinic. The impact of this program on rapid repeat pregnancies at 18 months after enrollment was evaluated. Five hundred ninety-eight adolescent females were enrolled from 7 obstetrics-gynecology clinics and 5 postpartum units of a large hospital system in a Midwestern city. Each participant was enrolled at least 28 weeks pregnant or less than 9 weeks postpartum. Each participant was randomized to either the Teen Options to Prevent Pregnancy intervention or a usual-care control condition. Intervention participants averaged 4.5 hours of assistance. Participants were contacted by blinded research staff at 6 and 18 months to complete self-report surveys. Differences in outcomes between the intervention and control groups were assessed using ordinary least-squares regression. There was an 18.1% absolute reduction in self-reported repeat pregnancy in the intervention group relative to the control group (20.5% vs 38.6%%; P < .001). There was a 13.7% absolute increase in self-reported long-acting reversible contraception use in the intervention group relative to the control group (40.2% vs 26.5%, P = .002). There was no evidence of harmful effects of the intervention on sexual risk behaviors, such as having sexual intercourse without a condom or greater number of partners. The Teen Options to Prevent Pregnancy program represents one of the few evidence-based interventions to reduce rapid repeat teen pregnancy. This relatively brief intervention may be a viable alternative to more time-intensive programs that adolescent mothers may be unable or unwilling to receive. Copyright © 2017 Elsevier Inc. All rights reserved.

  19. Towards understanding the role of the Bering Strait in the Plio-Pleistocene climate change

    NASA Astrophysics Data System (ADS)

    Okazaki, Y.; Onodera, J.; Teraishi, A.; Suto, I.

    2011-12-01

    The Bering Strait is the gateway between Pacific and Arctic, plays an important role in global freshwater cycle and eventually influences on climate change. The glacial Pacific Ocean had well-ventilated and nutrient-depleted glacial North Pacific Intermediate Water (GNPIW) above ~2000 m. GNPIW is a thicker and more deeply penetrating water mass than today's North Pacific Intermediate Water (NPIW). The source of GNPIW was likely in the Bering Sea based on neodymium isotope evidence. During Heinrich Event 1 in the early deglacial period, deep water extending to a depth of ~2500 m formed in the North Pacific. Modeling simulations suggest that a closed Bering Strait is essentially required for salinity built-up in the North Pacific to form the deep water. First opening of the Bering Strait was suggested to be in the latest Miocene and have repeated opening and closure by eustatic sea-level change associated with climate changes. However, our knowledge on the history about the opening/closure is limited due to lack of appropriate samples. During the IODP Expedition 323, Pliocene to Pleistocene marine sediment was continuously recovered from the Bering Sea. At the northern Bering continental slope sites (U1343 and U1344), the period with high abundance of diatom species Neodenticula seminae is terminated around 0.8-0.9 Ma, which appears to coincide with the Mid-Pleistocene Transition (MPT). While Neodenticula seminae is an endemic and predominant diatom in the modern subarctic Pacific and the Aleutian basin of the Bering Sea, the occurrence of this species is reported from the sediments between 0.84 and 1.25 Ma in the northern North Atlantic. This suggests a significantly intensified Arctic Throughflow and adaptive environment for N. seminae production from the Bering Strait to the Greenland Sea during the MPT. The observations of hydrography and the modern re-appearance of this taxon since 1999 in the Labrador Sea due to the melting of the Arctic Sea ice also suggests the specific requirements by this species: low salinity and high dissolved silicon concentrations. During the glacial cycles of the last 800 kyr, a limited input of Pacific water into the Arctic Ocean or disconnection was suggested by decreased abundances of N. seminae. Furthermore, repeated abundance peaks of radiolarian species Cycladophora davisiana, indicating cold and well ventilated intermediate water, suggest enhancement of intermediate to deep water formation in the Bering Sea during glacial periods, when the Bering Strait was closed. This research used samples and data provided by the IODP. We acknowledge the IODP Expedition 323 Shipboard Scientists.

  20. Inland area contingency plan and maps for Delaware, Maryland, West Virginia, District of Columbia (on CD-ROM). Data file

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    NONE

    1996-12-01

    EPA Region III has assembled on this CD a multitude of environmental data, in both visual and textual formats. While targeted for Facility Response Planning under the Oil Pollution Act of 1990, this information will prove helpful to anyone in the environmental arena. Specifically, the CD will aid contingency planning and emergency response personnel. Combining innovative GIS technology with EPA`s state-specific data allows you to display maps, find and identify map features, look at tabular information about map features, and print out maps. The CD was designed to be easy to use and incorporates example maps as well as helpmore » sections describing the use of the environmental data on the CD, and introduces you to the IACP Viewer and its capabilities. These help features will make it easy for you to conduct analysis, produce maps, and browse the IACP Plan. The IACP data are included in two formats: shapefiles, which can be viewed with the IACP Viewer or ESRI`s ArcView software (Version 2.1 or higher), and ARC/INFO export files, which can be imported into ARC/INFO or converted to other GIS data formats. Point Data Sources: Sensitive Areas, Surface Drinking Water Intakes, Groundwater Intakes, Groundwater Supply Facilities, NPL (National Priority List) Sites, FRP (Facility Response Plan) Facilities, NPDES (National Pollutant Discharge Elimination System) Facilities, Hospitals, RCRA (Resource Conservation and Recovery Act) Sites, TRI (Toxic Release Inventory) Sites, CERCLA (Comprehensive Environmental Response, Compensation, and Liability Act) Sites Line Data Sources: TIGER Roads, TIGER Railroads, TIGER Hydrography, Pipelines Polygon Data Sources: State Boundaries, County Boundaries, Watershed Boundaries (8-digit HUC), TIGER Hydrography, Public Lands, Populated Places, IACP Boundaries, Coast Guard Boundaries, Forest Types, US Congressional Districts, One-half Mile Buffer of Surface Drinking Water Intakes.« less

  1. A retrospective view of the development of the Gulf of Bothnia ecosystem

    NASA Astrophysics Data System (ADS)

    Kuosa, Harri; Fleming-Lehtinen, Vivi; Lehtinen, Sirpa; Lehtiniemi, Maiju; Nygård, Henrik; Raateoja, Mika; Raitaniemi, Jari; Tuimala, Jarno; Uusitalo, Laura; Suikkanen, Sanna

    2017-03-01

    We analysed long-term monitoring data from 1979 to 2012 in the Gulf of Bothnia, the northernmost extension of the Baltic Sea, to examine changes in the summer food web structure, and to reveal the factors causing the observed changes. Of the two sub-basins in the Gulf of Bothnia, the Bothnian Sea is more dynamic in its hydrography and food web structure than the Bothnian Bay, due to the variable influence of the more eutrophic and more saline Baltic Proper. Variation in deep-water intrusion from the main Baltic Proper, and its effect on salinity and stratification, had a clear effect on the phyto- and zooplankton communities in the Bothnian Sea. Probably due to this intrusion, the nutrient status in this basin has also changed in terms of nitrogen limitation, with subsequent class- and genus-level changes in phytoplankton community composition. The migration of cod to the Bothnian Sea during the 1980s had profound effects on the herring population, but cascading effects affecting the basis of the food web were not obvious. In contrast to a more pronounced interplay of both top-down control and bottom-up nutrient limitation of the Bothnian Sea, the Bothnian Bay food web was mostly driven by hydrography and climate, and major changes were observed in the basis of the food web. Community changes were observed in both basins in the Gulf of Bothnia throughout the entire time period. Human influence considerably affects both the basis of the food web and its very top, where man has replaced the natural top predators. Though the eutrophication status of the Gulf has been rather stable, the results indicate that the potential symptoms should be surveyed specifically in the Bothnian Sea, and that management of Baltic herring stocks requires an understanding, and thus monitoring, of the entire food web.

  2. Project CONVERGE: Impacts of local oceanographic processes on Adélie penguin foraging ecology

    NASA Astrophysics Data System (ADS)

    Kohut, J. T.; Bernard, K. S.; Fraser, W.; Oliver, M. J.; Statscewich, H.; Patterson-Fraser, D.; Winsor, P.; Cimino, M. A.; Miles, T. N.

    2016-02-01

    During the austral summer of 2014-2015, project CONVERGE deployed a multi-platform network to sample the Adélie penguin foraging hotspot associated with Palmer Deep Canyon along the Western Antarctic Peninsula. The focus of CONVERGE was to assess the impact of prey-concentrating ocean circulation dynamics on Adélie penguin foraging behavior. Food web links between phytoplankton and zooplankton abundance and penguin behavior were examined to better understand the within-season variability in Adélie foraging ecology. Since the High Frequency Radar (HFR) network installation in November 2014, the radial component current data from each of the three sites were combined to provide a high resolution (0.5 km) surface velocity maps. These hourly maps have revealed an incredibly dynamic system with strong fronts and frequent eddies extending across the Palmer Deep foraging area. A coordinated fleet of underwater gliders were used in concert with the HFR fields to sample the hydrography and phytoplankton distributions associated with convergent and divergent features. Three gliders mapped the along and across canyon variability of the hydrography, chlorophyll fluorescence and acoustic backscatter in the context of the observed surface currents and simultaneous penguin tracks. This presentation will highlight these synchronized measures of the food web in the context of the observed HFR fronts and eddies. The location and persistence of these features coupled with ecological sampling through the food web offer an unprecedented view of the Palmer Deep ecosystem. Specific examples will highlight how the vertical structure of the water column beneath the surface features stack the primary and secondary producers relative to observed penguin foraging behavior. The coupling from the physics through the food web as observed by our multi-platform network gives strong evidence for the critical role that distribution patterns of lower trophic levels have on Adélie foraging.

  3. Hydrographic characterization of two tidal creeks with implications for watershed land use, flushing times, and benthic production

    USGS Publications Warehouse

    Buzzelli, C.; Holland, Austin F.; Sanger, D.M.; Conrads, P.C.

    2007-01-01

    Many coastal ecosystems are undergoing anthropogenic stress from large increases in population and urbanization. In many regions changes in freshwater and material inputs to the coastal zone are altering the biogeochemical and biological capacities of ecosystems. Despite increased watershed inputs, large tidal volumes and flushing indicative of macrotidal estuaries can modulate the fate of introduced materials masking some of the symptoms of eutrophication. The Land Use Coastal Ecosystem Study (LU-CES) examined linkages between land use and environmental properties of Malind and Okatee Creeks in South Carolina from 2001 to 2004. The objectives of this particular study were to assess the hydrography of the two macrotidal creek ecosystems, explore differences in dissolved oxygen (DO), and develop a better understanding of the variations in primary and benthic secondary production in southeastern creek ecosystems. Depth, pH, salinity, and DO were reduced and more variable in Malind Creek than in Okatee Creek, although both creeks had strong semidiurnal frequencies in salinity time signatures. While time series analyses of DO saturation in Malind Creek revealed a dominant semidiurnal pattern, Okatee Creek had a distinctly diel DO pattern. The strongly semidiurnal fluctuations in DO and reduced flushing time indicated that biological processes were not fast enough to influence DO in Malind Creek. The Okatee Creek system had a much greater storage volume, a wider marsh, and a dominant 25-h DO frequency. These attributes contributed to an estimated 8-10 times more phytoplankton-based carbon in Okatee Creek and twice the annual benthic production. As expected from their proximity to the upland, low surface area, and high organic content, both ecosystems were net heterotrophic. This fundamental understanding of tidal creek hydrography is being used to help define linkages among differential watershed land uses, flushing characteristics, and levels of biological production in coastal ecosystems of the southeastern United States. ?? 2007 Estuarine Research Federation.

  4. Test-Retest Repeatability of Myocardial Blood Flow Measurements using Rubidium-82 Positron Emission Tomography

    NASA Astrophysics Data System (ADS)

    Efseaff, Matthew

    Rubidium-82 positron emission tomography (PET) imaging has been proposed for routine myocardial blood flow (MBF) quantification. Few studies have investigated the test-retest repeatability of this method. Same-day repeatability of rest MBF imaging was optimized with a highly automated analysis program using image-derived input functions and a dual spillover correction (SOC). The effects of heterogeneous tracer infusion profiles and subject hemodynamics on test-retest repeatability were investigated at rest and during hyperemic stress. Factors affecting rest MBF repeatability included gender, suspected coronary artery disease, and dual SOC (p < 0.001). The best repeatability coefficient for same-day rest MBF was 0.20 mL/min/g using a six-minute scan-time, iterative reconstruction, dual SOC, resting rate-pressure-product (RPP) adjustment, and a left atrium image-derived input function. The serial study repeatabilities of the optimized protocol in subjects with homogeneous RPPs and tracer infusion profiles was 0.19 and 0.53 mL/min/g at rest and stress, and 0.95 for stress / rest myocardial flow reserve (MFR). Subjects with heterogeneous tracer infusion profiles and hemodynamic conditions had significantly less repeatable MBF measurements at rest, stress, and stress/rest flow reserve (p < 0.05).

  5. “One code to find them all”: a perl tool to conveniently parse RepeatMasker output files

    PubMed Central

    2014-01-01

    Background Of the different bioinformatic methods used to recover transposable elements (TEs) in genome sequences, one of the most commonly used procedures is the homology-based method proposed by the RepeatMasker program. RepeatMasker generates several output files, including the .out file, which provides annotations for all detected repeats in a query sequence. However, a remaining challenge consists of identifying the different copies of TEs that correspond to the identified hits. This step is essential for any evolutionary/comparative analysis of the different copies within a family. Different possibilities can lead to multiple hits corresponding to a unique copy of an element, such as the presence of large deletions/insertions or undetermined bases, and distinct consensus corresponding to a single full-length sequence (like for long terminal repeat (LTR)-retrotransposons). These possibilities must be taken into account to determine the exact number of TE copies. Results We have developed a perl tool that parses the RepeatMasker .out file to better determine the number and positions of TE copies in the query sequence, in addition to computing quantitative information for the different families. To determine the accuracy of the program, we tested it on several RepeatMasker .out files corresponding to two organisms (Drosophila melanogaster and Homo sapiens) for which the TE content has already been largely described and which present great differences in genome size, TE content, and TE families. Conclusions Our tool provides access to detailed information concerning the TE content in a genome at the family level from the .out file of RepeatMasker. This information includes the exact position and orientation of each copy, its proportion in the query sequence, and its quality compared to the reference element. In addition, our tool allows a user to directly retrieve the sequence of each copy and obtain the same detailed information at the family level when a local library with incomplete TE class/subclass information was used with RepeatMasker. We hope that this tool will be helpful for people working on the distribution and evolution of TEs within genomes.

  6. Effects of a Program for Developing Creative Thinking Skills

    ERIC Educational Resources Information Center

    Rabanos, Natalia Larraz; Torres, Pedro Allueva

    2012-01-01

    Introduction: The aim of this study is to present an intervention program for creative skills development applied to a group of students of lower Secondary Education. Method: This program was applied in a school in Zaragoza (Spain) during the 2008-09 academic year. The study used a repeated-measures, quasi-experimental design with non-equivalent…

  7. Early Intervention in Reading[R]. What Works Clearinghouse Intervention Report

    ERIC Educational Resources Information Center

    What Works Clearinghouse, 2008

    2008-01-01

    "Early Intervention in Reading"[R] is a program designed to provide extra instruction to groups of students at risk of failing to learn to read. The program uses picture books to stress instruction in phonemic awareness, phonics, and contextual analysis, along with repeated reading and writing. In grades K, 1, and 2, the program is based on…

  8. Activities in an S-STEM Program to Catalyze Early Entry into Research

    ERIC Educational Resources Information Center

    Graham, Kate J.; McIntee, Edward J.; Raigoza, Annette F.; Fazal, M. Abul; Jakubowski, Henry V.

    2017-01-01

    A cohort program to increase retention of under-represented groups in chemistry was developed at the College of Saint Benedict/Saint John's University. In particular, this program chose to emphasize early career mentoring and early access to research. This goal was chosen because research has been repeatedly shown to increase scientific identity…

  9. Evaluation of the Preschool Life Skills Program in Head Start Classrooms: A Systematic Replication

    ERIC Educational Resources Information Center

    Hanley, Gregory P.; Fahmie, Tara A.; Heal, Nicole A.

    2014-01-01

    In an attempt to address risk factors associated with extensive nonfamilial child care, we implemented the preschool life skills (PLS) program (Hanley, Heal, Tiger, & Ingvarsson, 2007) in two community-based Head Start classrooms. A multiple baseline design across classrooms, repeated across skills, showed that the program resulted in a 5-fold…

  10. First versus repeat treatment with a lifestyle intervention program: attendance and weight loss outcomes.

    PubMed

    Venditti, E M; Bray, G A; Carrion-Petersen, M L; Delahanty, L M; Edelstein, S L; Hamman, R F; Hoskin, M A; Knowler, W C; Ma, Y

    2008-10-01

    Following unblinding of the Diabetes Prevention Program (DPP) results, a 16-session lifestyle intervention program was offered to all study participants, including those who had initially been randomized to lifestyle treatment. This study compares the effects of the lifestyle program between participants who had previous exposure and those who had not. A 16-session behavioral intervention was conducted in groups at each of the 27 DPP sites during a transitional (bridge) period from the DPP trial to the DPP Outcomes Study (DPPOS). Session participation for this 6-month behavioral weight loss program was confirmed by originally randomized treatment groups. Independently assessed weight measurements were available within a 7-month period before and after the program for 2808 ethnically diverse participants. Participants from the lifestyle group in the DPP were the least likely to attend a repeat offering of a 16-session behavioral weight loss program conducted in groups. Weight loss during the transitional lifestyle program was strongly related to the duration of attendance in the three groups that were participating in the program for the first time (metformin, placebo and troglitazone), but not related to amount of earlier weight loss. Individuals who were naive to the behavioral program lost a greater amount of weight and this was strongly related to their degree of participation. A second exposure to a behavioral weight loss program resulted in unsatisfactory low attendance rates and weight loss.

  11. Beef donor cows with high number of retrieved COC produce more in vitro embryos compared with cows with low number of COC after repeated ovum pick-up sessions.

    PubMed

    Monteiro, F M; Batista, E O S; Vieira, L M; Bayeux, B M; Accorsi, M; Campanholi, S P; Dias, E A R; Souza, A H; Baruselli, P S

    2017-03-01

    The aim of the present study was to evaluate whether repeated ovum pick-up (OPU) procedures may affect the efficiency of OPU programs for in vitro embryo production (IVEP) in Bos indicus (Nelore) donors. In addition, the repeatability (r) efficiency of IVEP was also assessed. Data available were from 432 OPU-IVEP sessions that were performed at random stages of the estrous cycle in 36 cycling, nonlactating Nelore donors. Semen from three Nelore bulls was used for the IVF. Donors were submitted to 12 consecutive OPU procedures, with an interval of approximately 30 days between sessions. Data were analyzed as repeated measures using the GLIMMIX procedure of SAS 9.3. Cows yielding ≥15 COCs were defined as "high" COCs and cows with less than 15 COCs were defined as "low" COCs donors. The number of COCs retrieved decreased over time in donors classified with high COCs and remained fairly steady in cows with low COCs at the beginning of the program (P session*COC retrieved groups  = 0.02). Moreover, the number of COCs retrieved (P < 0.0001), and number of blastocysts produced per OPU (P = 0.001) was greater for the high COCs donors compared with the low COCs category, and these results were consistent across OPU sessions. Interestingly, there was no effect of COCs category on the rate of blastocyst development (P = 0.83). In addition, number of blastocysts produced were not affected by repeated OPU (P = 0.37) and interactions between time and COC category (P = 0.72). Similarly, blastocyst rate was not affected by repeated OPU (P = 0.21) and interactions between time and COC category (P = 0.58). Despite of COC category of the donor cows, repeatability was high for the number of COCs retrieved (r = 0.81), number of blastocysts produced per OPU (r = 0.79), and blastocyst rate (0.69). In conclusion, overall numbers of COCs decreased over time in donors classified as having high COCs. However, cumulative amounts of produced blastocysts were greater in donors with high COCs. More importantly, high repeatability was observed in terms of IVEP efficiency. Therefore, IVEP programs can be significantly improved with more aggressive selection toward donors with greater numbers of COCs. Copyright © 2016 Elsevier Inc. All rights reserved.

  12. A Method for WD40 Repeat Detection and Secondary Structure Prediction

    PubMed Central

    Wang, Yang; Jiang, Fan; Zhuo, Zhu; Wu, Xian-Hui; Wu, Yun-Dong

    2013-01-01

    WD40-repeat proteins (WD40s), as one of the largest protein families in eukaryotes, play vital roles in assembling protein-protein/DNA/RNA complexes. WD40s fold into similar β-propeller structures despite diversified sequences. A program WDSP (WD40 repeat protein Structure Predictor) has been developed to accurately identify WD40 repeats and predict their secondary structures. The method is designed specifically for WD40 proteins by incorporating both local residue information and non-local family-specific structural features. It overcomes the problem of highly diversified protein sequences and variable loops. In addition, WDSP achieves a better prediction in identifying multiple WD40-domain proteins by taking the global combination of repeats into consideration. In secondary structure prediction, the average Q3 accuracy of WDSP in jack-knife test reaches 93.7%. A disease related protein LRRK2 was used as a representive example to demonstrate the structure prediction. PMID:23776530

  13. In-class Simulations of the Iterated Prisoner's Dilemma Game.

    ERIC Educational Resources Information Center

    Bodo, Peter

    2002-01-01

    Developed a simple computer program for the in-class simulation of the repeated prisoner's dilemma game with student-designed strategies. Describes the basic features of the software. Presents two examples using the program to teach the problems of cooperation among profit-maximizing agents. (JEH)

  14. Effects of outdoor education stream classes on substrate movement and macroinvertebrate colonization

    USDA-ARS?s Scientific Manuscript database

    Environmental education and stream quality monitoring overlap in stream classes conducted at resident outdoor education (ROE) programs. ROE programs frequently use the same stream locations for their stream classes. The repeated use of the same location can potentially degrade aquatic macroinverte...

  15. Impact of an Activity-Based Program on Health, Quality of Life, and Occupational Performance of Women Diagnosed With Cancer.

    PubMed

    Maher, Colleen; Mendonca, Rochelle J

    We evaluated the impact of a 1-wk activity program on the health, quality of life (QOL), and occupational performance of community-living women diagnosed with cancer. A one-group pretest-posttest repeated-measures design was used. Participants completed a functional health measure (36-Item Short Form Health Survey [SF-36]), a QOL measure (World Health Organization Quality of Life-Brief version [WHOQOL-BREF]), and an occupational performance and satisfaction measure (Canadian Occupational Performance Measure [COPM]) before and 6 wk after program completion. The COPM was also administered on Day 5. Paired t tests for the SF-36 and WHOQOL-BREF showed no significant differences, except for the WHOQOL-BREF's Social Relationships subscale (p < .008). Repeated-measures analyses of variance showed a significant difference in COPM performance and satisfaction scores (p < .001). The activity program effectively improved occupational performance and satisfaction and social relationships of community-living women diagnosed with cancer. Copyright © 2018 by the American Occupational Therapy Association, Inc.

  16. A Decision Support Framework for Feasibility Analysis of International Space Station (ISS) Research Capability Enhancing Options

    NASA Technical Reports Server (NTRS)

    Ortiz, James N.; Scott,Kelly; Smith, Harold

    2004-01-01

    The assembly and operation of the ISS has generated significant challenges that have ultimately impacted resources available to the program's primary mission: research. To address this, program personnel routinely perform trade-off studies on alternative options to enhance research. The approach, content level of analysis and resulting outputs of these studies vary due to many factors, however, complicating the Program Manager's job of selecting the best option. To address this, the program requested a framework be developed to evaluate multiple research-enhancing options in a thorough, disciplined and repeatable manner, and to identify the best option on the basis of cost, benefit and risk. The resulting framework consisted of a systematic methodology and a decision-support toolset. The framework provides quantifiable and repeatable means for ranking research-enhancing options for the complex and multiple-constraint domain of the space research laboratory. This paper describes the development, verification and validation of this framework and provides observations on its operational use.

  17. A descriptive evaluation of the Seattle Police Department's crisis response team officer/mental health professional partnership pilot program.

    PubMed

    Helfgott, Jacqueline B; Hickman, Matthew J; Labossiere, Andre P

    2016-01-01

    The Seattle Police Department (SPD) recently enhanced their response to individuals in behavioral crisis through a pilot Crisis Response Team (CRT) consisting of dedicated Crisis Intervention Team (CIT) officers (OFC) paired with a Mental Health Professional (MHP). This study presents results of an incident-based descriptive evaluation of the SPD's CRT pilot program, implemented from 2010 to 2012. The purpose of the evaluation was to determine the value-added by the MHP in cases involving individuals in behavioral crisis as well as the effectiveness of the CRT program with regard to resolution time, repeat contacts, and referral to services. Data were collected from SPD general offense and supplemental reports for a 12-month segment of the program. Key variables included incident location, case clearance, repeat contacts, linkages to services, and case disposition. Results of analyses of general offense and supplemental reports are presented and implications for future development of the OFC/MHP partnership are discussed. Copyright © 2015 Elsevier Ltd. All rights reserved.

  18. Effectiveness of a Federal Healthy Start program in reducing primary and repeat teen pregnancies: our experience over the decade.

    PubMed

    Salihu, Hamisu M; August, Euna M; Jeffers, Delores F; Mbah, Alfred K; Alio, Amina P; Berry, Estrellita

    2011-06-01

    To evaluate the effectiveness of a Federal Healthy Start program in reducing primary and repeat teen pregnancies in a disadvantaged community. An ecological study that compares trends in teen pregnancy in the catchment area in which the community-based intervention was administered with two ecologic controls: the county (Hillsborough) and the state (Florida). Our catchment area is East Tampa, a socio-economically disadvantaged community in Hillsborough County, Florida. Preconception care targeted teenagers between the ages of 10 and 19 years. Interconception care involved young mothers under the age of 20 with a previous birth. The population was comprised primarily of African Americans. Preconception care services for primary teen pregnancy reduction offered sex education, family planning, drug and violence prevention education, and communication and negotiation skills acquisition. Interconception care service offered young women health education through monthly home visitation or monthly peer support group meetings addressing a range of topics using the life course perspective as framework. Reduction in primary teen pregnancy and repeat teen pregnancy among adolescents. The decline in primary teen pregnancy in the catchment area was 60% and 80% greater than the reduction experienced at the county level and at the state level respectively over the period of the study. However, efforts to prevent repeat pregnancy were not successful. The Federal Healthy Start Preconception Care program, in collaboration with community partners, contributed to the prevention of first-time teen pregnancy in a community faced with significant social and economic challenges. Copyright © 2011 North American Society for Pediatric and Adolescent Gynecology. Published by Elsevier Inc. All rights reserved.

  19. Boulder Valley Schools Teen Parenting Program: An Exemplary Vocational Education Program Serving a Population with Special Needs.

    ERIC Educational Resources Information Center

    Coyle-Williams, Maureen; Wermuth, Tom

    1990-01-01

    The Boulder Valley (Colorado) Teen Parenting Program is designed to meet the educational and vocational needs of pregnant or parenting adolescents. It focuses on the following goals: (1) decreasing the dropout rate of teen parents; (2) improving the health and well-being of children born to teen parents; (3) decreasing repeat pregnancies of teen…

  20. C Language Integrated Production System, Ada Version

    NASA Technical Reports Server (NTRS)

    Culbert, Chris; Riley, Gary; Savely, Robert T.; Melebeck, Clovis J.; White, Wesley A.; Mcgregor, Terry L.; Ferguson, Melisa; Razavipour, Reza

    1992-01-01

    CLIPS/Ada provides capabilities of CLIPS v4.3 but uses Ada as source language for CLIPS executable code. Implements forward-chaining rule-based language. Program contains inference engine and language syntax providing framework for construction of expert-system program. Also includes features for debugging application program. Based on Rete algorithm which provides efficient method for performing repeated matching of patterns. Written in Ada.

  1. Hudson Canyon Offshore New York and New Jersey: Active Circular Depressions, Fans, Ravines, Methane Discharge and Water Masses

    NASA Astrophysics Data System (ADS)

    Rona, P. A.; Guida, V.; Scranton, M. I.; Gong, D.; Haag, S.; Macelloni, L.; Simonetti, A.; James, J.; Diercks, A.; Asper, V. L.

    2009-12-01

    We investigated Hudson Canyon from where it begins at the seaward edge of the continental shelf (water depth 100 m) to ~30 km seaward (100-700 m) using high-resolution bathymetry (AUV Eagle Ray; ISE Explorer; EM2000 sonar) and standard oceanographic methods. We find features and processes that create varied distinctive habitats in submarine canyons on passive continental margins, as follows: 1)Sediment conduit: The initial 10 km- long section of the canyon head connects with cross-shelf sediment transport and is smoothed by sediment accumulation indicating that it is presently inactive as a sediment conduit, in contrast to its active role during prior intervals of lowered sea level. 2)Circular depressions: A population of circular depressions with diameters from 50 to 400 m, rim-to-floor relief up to 20 m increasing directly with diameter, flat rough floors and steep walls (15-25 degrees) occur in sediment near the base of both walls of the canyon. The number of circular depressions increases with water depth with one at 325 m in the initial 10 km-long NW-SE section of the canyon, two at 350 m in the next 10 km N-S section, and nineteen at 300 to 500 m at the SW wall of the next 10 km NW-SE section. The sharp shape of the depressions suggests that they are actively forming. Larger circular depressions (diameter <800 m) exhibit different characteristics. 3)Methane chemistry: A methane anomaly (50 nmol) ten times background was measured in August 2008 in the near-bottom water column adjacent to one of the two circular depressions in the middle canyon section. In August 2009 water samples were recovered at other circular depressions and are being analyzed to test for methane discharge. We suggest that the circular depressions are gas release-collapse features possibly produced by dissociation of underlying gas hydrates. 4)Fans and ravines: Sediment fans with intervening ravines about 1 km apart extend orthogonal to the canyon axis down the two walls of the canyon in the second and third sections. 5)Hydrography: A dynamic system of multiple layers of inter-leaved shelf (cold, fresh) and slope (warm, salty) water masses was observed in the canyon head in summers 2007, 2008 and 2009 and found to produce shifting fronts and strong currents. Dynamic interactions between the hydrography and different terrains create a wide range of habitat conditions in the canyon critical for biodiversity. Enhanced shelf-slope exchange of water masses facilitated by the complex canyon topography may influence adjacent shelf circulation, and impact ecosystems including commercial fish stocks well beyond the canyon. We thank NOAA National Marine Fisheries Service(NMFS), National Institute of Science and Technology (NIUST), and National Undersea Research Program (NURP) for support.

  2. Student Loyalty Assessment with Online Master's Programs

    ERIC Educational Resources Information Center

    Dehghan, Ali

    2012-01-01

    Relationship marketing is attracting, maintaining, and, in multi-service organizations, enhancing customer relationships. Educational programs and services, like those of businesses, depend highly on the repeated purchases of their loyal customers. The purpose of this descriptive research is to investigate the relationships between factors that…

  3. Evaluating the Fine Arts Program at the Center for Excellence in Disabilities

    ERIC Educational Resources Information Center

    Schlosnagle, Leo; McBean, Amanda L.; Cutlip, Milisa; Panzironi, Helen; Jarmolowicz, David P.

    2014-01-01

    Art programs for people with disabilities may encourage creativity, promote engagement, emphasize inclusion, and extend access and opportunities for community involvement. This mixed methods study utilized quantitative and qualitative data, repeated measures, action research, and stakeholder collaboration to develop and implement an evaluation…

  4. Repeatability of Sugarcane Selection on Sand and Organic Soils

    USDA-ARS?s Scientific Manuscript database

    The Canal Point (CP) Sugarcane Cultivar Development Program (a cooperative program between the USDA-ARS, the University of Florida and the Florida Sugarcane League) has been more successful at breeding for cultivars adapted to organic soils (muck) than for those adapted to sand soils. Currently, onl...

  5. Opinions on Suicide and Perceived Barriers to Care in a Sample of United States Marine Non-Commissioned Officers: Implications for Future Frontline Supervisors’ Suicide Prevention Training Programs

    DTIC Science & Technology

    2013-11-06

    the Scree plot (Figure 3) and the analysis was repeated saving these four factors. The Kaiser - Meyer - Olkin measure of sampling adequacy was .95...the Scree plot (Figure 4) and the analysis was repeated saving these three factors. The Kaiser - Meyer - Olkin measure of sampling adequacy was .90, above

  6. Fostering repeat donations in Ghana.

    PubMed

    Owusu-Ofori, S; Asenso-Mensah, K; Boateng, P; Sarkodie, F; Allain, J-P

    2010-01-01

    Most African countries are challenged in recruiting and retaining voluntary blood donors by cost and other complexities and in establishing and implementing national blood policies. The availability of replacement donors who are a cheaper source of blood has not enhanced repeat voluntary donor initiatives. An overview of activities for recruiting and retaining voluntary blood donors was carried out. Donor records from mobile sessions were reviewed from 2002 to 2008. A total of 71,701 blood donations; 45,515 (63.5%) being voluntary donations with 11,680 (25%) repeat donations were collected during the study period. Donations from schools and colleges contributed a steady 60% of total voluntary whilst radio station blood drives increased contribution from 10 to 27%. Though Muslim population is less than 20%, blood collection was above the 30-donation cost-effectiveness threshold with a repeat donation trend reaching 60%. In contrast Christian worshippers provided <25 unit/session and 30% repeat donations. Repeat donation trends amongst school donors and radio blood drives were 20% and 70% respectively. Repeat donations rates have been variable amongst different blood donor groups in Kumasi, Ghana. The impact of community leaders in propagating altruism cannot be overemphasized. Programs aiming at motivating replacement donors to be repeat donors should be developed and assessed. Copyright 2009 The International Association for Biologicals. All rights reserved.

  7. Structure prediction of polyglutamine disease proteins: comparison of methods

    PubMed Central

    2014-01-01

    Background The expansion of polyglutamine (poly-Q) repeats in several unrelated proteins is associated with at least ten neurodegenerative diseases. The length of the poly-Q regions plays an important role in the progression of the diseases. The number of glutamines (Q) is inversely related to the onset age of these polyglutamine diseases, and the expansion of poly-Q repeats has been associated with protein misfolding. However, very little is known about the structural changes induced by the expansion of the repeats. Computational methods can provide an alternative to determine the structure of these poly-Q proteins, but it is important to evaluate their performance before large scale prediction work is done. Results In this paper, two popular protein structure prediction programs, I-TASSER and Rosetta, have been used to predict the structure of the N-terminal fragment of a protein associated with Huntington's disease with 17 glutamines. Results show that both programs have the ability to find the native structures, but I-TASSER performs better for the overall task. Conclusions Both I-TASSER and Rosetta can be used for structure prediction of proteins with poly-Q repeats. Knowledge of poly-Q structure may significantly contribute to development of therapeutic strategies for poly-Q diseases. PMID:25080018

  8. Deep landscape update of dispersed and tandem repeats in the genome model of the red jungle fowl, Gallus gallus, using a series of de novo investigating tools.

    PubMed

    Guizard, Sébastien; Piégu, Benoît; Arensburger, Peter; Guillou, Florian; Bigot, Yves

    2016-08-19

    The program RepeatMasker and the database Repbase-ISB are part of the most widely used strategy for annotating repeats in animal genomes. They have been used to show that avian genomes have a lower repeat content (8-12 %) than the sequenced genomes of many vertebrate species (30-55 %). However, the efficiency of such a library-based strategies is dependent on the quality and completeness of the sequences in the database that is used. An alternative to these library based methods are methods that identify repeats de novo. These alternative methods have existed for a least a decade and may be more powerful than the library based methods. We have used an annotation strategy involving several complementary de novo tools to determine the repeat content of the model genome galGal4 (1.04 Gbp), including identifying simple sequence repeats (SSRs), tandem repeats and transposable elements (TEs). We annotated over one Gbp. of the galGal4 genome and showed that it is composed of approximately 19 % SSRs and TEs repeats. Furthermore, we estimate that the actual genome of the red jungle fowl contains about 31-35 % repeats. We find that library-based methods tend to overestimate TE diversity. These results have a major impact on the current understanding of repeats distributions throughout chromosomes in the red jungle fowl. Our results are a proof of concept of the reliability of using de novo tools to annotate repeats in large animal genomes. They have also revealed issues that will need to be resolved in order to develop gold-standard methodologies for annotating repeats in eukaryote genomes.

  9. Clinical oversight and the avoidance of repeat induced abortion.

    PubMed

    Jacovetty, Erica L; Clare, Camille A; Squire, Mary-Beatrice; Kubal, Keshar P; Liou, Sherry; Inchiosa, Mario A

    2018-06-03

    To evaluate the impact of patient counseling, demographics, and contraceptive methods on repeat induced abortion in women attending family planning clinics. A retrospective chart review of repeat induced abortions was performed. The analysis included patients with an initial induced abortion obtained between January 1, 2001, and March 31, 2014, at New York City Health + Hospitals/Metropolitan. The duration of involvement in the family planning program, the use of contraceptive interventions, and 18 patient factors were analyzed for their correlation with the incidence of repeat induced abortions per year of follow-up. A decreased rate of repeat induced abortions was associated with a longer duration of clinical oversight (r 2 =0.449, P<0.001), a higher contraceptive efficacy score (r=0.280, P=0.025), and a larger number of clinic visits for contraception (r=0.333, P=0.007). A continuum of contact with all of the services of a family planning clinic demonstrated a strong efficacy to limit repeat induced abortions. By determining the patient characteristics that most influence repeat induced abortion rates, providers can best choose the most efficacious method of contraception available. © 2018 International Federation of Gynecology and Obstetrics.

  10. Monitoring desertification using the integrated CA GIS and RS with AHP-derived weights: a case study of Beijing and its neighboring areas in recent 20 years

    NASA Astrophysics Data System (ADS)

    Wang, Gongwen; Chen, Jianping; Li, Qing; Ding, Huoping

    2007-06-01

    This paper aims to monitor desertification evolution of different stages and assess its factors using remote sensing (RS) data and cellular automata (CA)-geographical information system (GIS) with an adaptive analytic hierarchy process (AHP) to derive weights of desertification factors. The study areas (114°E to 117°E and 39.5°to 42.2°N) are one of the important agro-pastoral transitional zone, located in Beijing and its neighboring areas, marginal desertified areas in North China. Desertification information including NDVI and desertification area were derived from the satellite images of 1987TM, 1996TM (with a resolution of 28.5), and 2006 CBERS-(with a resolution of 19.5 m) in study areas. The ancillary data in terms of meteorology, geology, 30m-DEM, hydrography can be statistical analyzed with GIS technology. A CA model based on the desertification factors with AHP-derived weights was built by AML program in ArcGIS workstation to assess the evolution of desertification in different stages (from 1987 to 1996, and from 1996 to 2006). The research results show that desertified areas was increased by 3.28% per year from 1987 to 1996, so was 0.51% per year from 1996 to 2006. Although the weights of desertification factors have some changes in different stages, the main factors including climate, NDVI, and terrain did not change except the values in study areas.

  11. Effects of a gerotranscendence educational program on gerotranscendence recognition, attitude towards aging and behavioral intention towards the elderly in long-term care facilities: A quasi-experimental study.

    PubMed

    Lin, Yen-Chun; Wang, Chi-Jane; Wang, Jing-Jy

    2016-01-01

    Caregivers in long-term care (LTC) facilities have to uphold a positive attitude toward the elderly, so they will be more willing to provide the elderly with care of higher quality. Theory of Gerotranscendence is a theory which can assist the elderly in developing more mature and intellectual state of mind. It is hoped that the caregivers who receive gerotranscendence education may apply its concept to the care for the elderly. To evaluate the effects of the gerotranscendence educational program on caregivers' gerotranscendence recognition, attitude towards aging, and behavioral intention towards caring for the elderly. A quasi-experimental design with repeated measures was conducted. A total of 41 caregivers in LTC facilities participated and completed the study. Participants were invited to participate in a 2-day gerotranscendence educational program, and measurement took place at baseline, the end of the program (post-test) and three months after the program (follow-up test). The research tools included Gerotranscendence Recognition Scale-Chinese version, Aging Attitude scale, and Caregivers' Behavioral Intention Scale. This study used GLM repeated measures to perform analysis. There was a statistically significant difference in three repeated measures of participants' gerotranscendence recognition and behavior intention toward caring for the elderly (p=.002, .002, respectively) but not in the aging attitude score (p=.21). The post hoc comparison showed that the scores of these two outcomes in the post-test were significantly higher than those in the pre-test (p=.000; .024). However, the scores in the follow-up test were almost the same as those in the pre-test. The gerotranscendence educational program had timely effects on caregivers' gerotranscendence recognition and behavioral intention towards aging, and so caregivers working in LTC facilities may require ongoing training in the gerotranscendence educational program to ensure that these positive effects remain strong. Copyright © 2015 Elsevier Ltd. All rights reserved.

  12. Power analysis for multivariate and repeated measures designs: a flexible approach using the SPSS MANOVA procedure.

    PubMed

    D'Amico, E J; Neilands, T B; Zambarano, R

    2001-11-01

    Although power analysis is an important component in the planning and implementation of research designs, it is often ignored. Computer programs for performing power analysis are available, but most have limitations, particularly for complex multivariate designs. An SPSS procedure is presented that can be used for calculating power for univariate, multivariate, and repeated measures models with and without time-varying and time-constant covariates. Three examples provide a framework for calculating power via this method: an ANCOVA, a MANOVA, and a repeated measures ANOVA with two or more groups. The benefits and limitations of this procedure are discussed.

  13. PESTICIDE EXPOSURE AND POTENTIAL HEALTH EFFECTS IN YOUNG CHILDREN ALONG THE U.S.-MEXICO BORDER

    EPA Science Inventory

    The purpose of the Pesticides in Young Children - Border States Program is to assess the relationship of health outcomes in children living along the United States and Mexico border to repeated pesticide exposures via multiple sources and pathways. The present research program ...

  14. Intensive Opera Training Program Effects: A Psychological Investigation

    ERIC Educational Resources Information Center

    Thomson, Paula; Jaque, S. Victoria; Baltz, Ann

    2017-01-01

    Opera singers face psychological and occupational demands that often compromise well-being and career satisfaction. In this repeated measures study, professional and pre-professional opera singers participated in either a two-week or four-week intensive training program that was designed to enhance performance skills. Curriculum was taught in an…

  15. Ecological Effects of the War in Vietnam

    ERIC Educational Resources Information Center

    Orians, Gordon H.; Pfeiffer, E. W.

    1970-01-01

    Research report on the severe ecological consequences of the defoliation program by American military forces in Vietnam. A significant fraction of mature trees in most forests are killed by single application of herbicides and almost completely killed by repeated sprayings. AAAS is urged to set up an international research program on the…

  16. Read Naturally[R]. What Works Clearinghouse Intervention Report

    ERIC Educational Resources Information Center

    What Works Clearinghouse, 2010

    2010-01-01

    "Read Naturally"[R] is an elementary and middle school supplemental reading program designed to improve reading fluency using a combination of books, audiotapes, and computer software. The program has three main strategies: repeated reading of text for developing oral reading fluency, teacher modeling of story reading, and systematic…

  17. 36 CFR 230.10 - Prohibitions.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... programs, or private sector programs, except where such practices are repeated due to a failure of a prior... 36 Parks, Forests, and Public Property 2 2010-07-01 2010-07-01 false Prohibitions. 230.10 Section 230.10 Parks, Forests, and Public Property FOREST SERVICE, DEPARTMENT OF AGRICULTURE STATE AND PRIVATE...

  18. The Gateway to the Profession: Assessing Teacher Preparation Programs Based on Student Achievement

    ERIC Educational Resources Information Center

    Goldhaber, Dan; Liddle, Stephanie; Theobald, Roddy

    2013-01-01

    With teacher quality repeatedly cited as the most important "schooling" factor influencing student achievement, there has been increased interest in examining the efficacy of teacher training programs. This paper presents the results of research investigating the relationship between teachers who graduate from different training programs…

  19. Using a 360-Degree Appraisal Approach to Re-Design Advising Programs

    ERIC Educational Resources Information Center

    Maples, Glenn; Harris, Bette; Greco, Anna M.

    2010-01-01

    Over the past 30 years, researchers have repeatedly demonstrated the need to improve academic advising. Nonetheless, at many Universities academic advising remains a neglected endeavor--poorly measured, managed and rewarded. This paper considers the implementation of an academic advising program which parallels the 360-Degree feedback approach…

  20. Dynamic UNITY

    DTIC Science & Technology

    2002-01-01

    UNITY program that implements exactly the same algorithm as Specification 1.1. The correctness of this program is proven in amanner sim- 4 program...chapter, we introduce the Dynamic UNITY formalism, which allows us to reason about algorithms and protocols in which the sets of participating processes...implements Euclid’s algorithm for calculating the greatest common divisor (GCD) of two integers; it repeat- edly reads an integer message from each of its

  1. Repetita Iuvant? Lessons from Repeated RCTs on the Effectiveness of a Teacher Professional Development Program

    ERIC Educational Resources Information Center

    Pennisi, Aline; Argentin, Gianluca; Abbiati, Giovanni; Caputo, Andrea

    2016-01-01

    This work summarizes the results of two randomized control trails (RCTs) aimed at evaluating the effectiveness of a professional development program for lower secondary school math teachers. The program, called M@t.abel, was financed by the Ministry of Education in Southern Italy with EU funds. It lasts a full school year and it is based on formal…

  2. Toward a Unified Understanding of Mercury and Methylated Mercury from the World's Oceans

    NASA Astrophysics Data System (ADS)

    McNutt, M. K.; Krabbenhoft, D. P.; Landing, W. M.; Sunderland, E. M.

    2012-12-01

    Marine fish and shellfish are the main source of toxic methylmercury exposure for humans. As recently as decade ago, very limited aqueous methylated mercury data were available from marine settings, resulting in a generally poor understanding of the processes controlling mercury in pelagic marine food webs. Recent oceanographic cruises have significantly improved availability of reliable measurements of methylated mercury and total mercury in seawater. This presentation will focus on vertical seawater profiles collected to depths 1000 m from three recent sampling efforts in collaboration with the CLIVAR Repeat Hydrography Program sponsored by NOAA including: 1) the northeastern Pacific (P16N cruise from Honolulu, Hawaii to Kodiak, Alaska); (2) the southern Indian Ocean (I5 cruise from Cape Town, South Africa, to Fremantle, Australia); and, (3) the Southern Ocean cruise (S4P from McMurdo, Antarctica, to Punta Arenas, Chile). Analytical results presented were all derived from the USGS Mercury Research Lab (http://wi.water.usgs.gov/mercury-lab). Supporting data derived from these cruises on water mass ages, nutrients, carbon and dissolved oxygen provide an opportunity to develop a stronger understanding of the biogeochemical factors controlling oceanic distributions of mercury and methylated mercury. Whole-water, median total mercury, and methylated mercury concentrations for the northern Pacific, southern Indian, and Southern Ocean were 1.10, 0.80, and 1.65 pM, , and 0.11, 0.08, and 0.32 pM, respectively. For all three oceans, vertical profiles of total mercury generally show the lowest concentrations in the surface mixed layer, and concentration maxima at the 700-1000 m depths. Surface depletion of total mercury is attributed to photo-chemical reduction and evasion of gaseous elemental mercury as well as scavenging by settling particulate matter, the main vector of transport to the subsurface ocean. Methylated mercury in all the ocean profiles reveal distinct mid-profile concentration maxima, however, the depth of the maxima are more varied than the total mercury profiles (150 - 700m). Also, our observed distribution of methylated mercury highly correlated with organic carbon remineralization rates (OCRR) in the North Pacific and Indian Oceans. Interestingly, we find the highest methylated mercury concentrations in the Southern Ocean, suggesting the possibility of unique mechanisms for methylmercury production, preservation, and degradation in polar ecosystems such as cold water temperatures, extended periods of sea ice cover, and annual atmospheric mercury depletion events. We are using these data to better link oceanic production of bioaccumulative mercury to models for atmospheric and oceanic transport and bioaccumulation. This will ultimately lead to a better understanding of mercury levels in consumable fish and shell fish.

  3. Modeling Open Architecture and Evolutionary Acquisition: Implementation Lessons from the ARCI Program for the Rapid Capability Insertion Process

    DTIC Science & Technology

    2009-04-22

    Implementation Issues Another RCIP implementation risk is program management burnout . The ACRI program manager specifically identified the potential...of burnout in his program management team due to the repeated, intense Integration phases. To investigate the possibility and severity of this risk to...the ACRI simulation. This suggests that the burnout risk will be larger for RCIP than it was for ACRI. Successfully implementing a sustainable RCIP

  4. Sandia PUF Analysis Tool

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    2014-06-11

    This program is a graphical user interface for measuring and performing inter-active analysis of physical unclonable functions (PUFs). It is intended for demonstration and education purposes. See license.txt for license details. The program features a PUF visualization that demonstrates how signatures differ between PUFs and how they exhibit noise over repeated measurements. A similarity scoreboard shows the user how close the current measurement is to the closest chip signatures in the database. Other metrics such as average noise and inter-chip Hamming distances are presented to the user. Randomness tests published in NIST SP 800-22 can be computed and displayed. Noisemore » and inter-chip histograms for the sample of PUFs and repeated PUF measurements can be drawn.« less

  5. Kaiser Permanente Creatinine Safety Program: A Mechanism to Ensure Widespread Detection and Care for Chronic Kidney Disease.

    PubMed

    Sim, John J; Rutkowski, Mark P; Selevan, David C; Batech, Michael; Timmins, Royann; Slezak, Jeff M; Jacobsen, Steven J; Kanter, Michael H

    2015-11-01

    Chronic kidney disease is highly prevalent but is challenging to diagnose because of the need to establish chronicity. Within the current healthcare environment, a single abnormal creatinine measurement often can go without a follow-up, which can lead to missed diagnoses or diagnostic errors. The Kaiser Permanente Southern California creatinine safety program (the Creatinine SureNet) was created to help ensure that all single abnormal creatinine results had a follow-up evaluation. In the period February 1, 2010, to March 1, 2014, the electronic health records were used to capture individuals with single abnormal creatinine results that went >90 days without a repeat measurement. A coordinated effort among a centralized regional nurse and providers was used to communicate with patients and order a repeat creatinine measurement. A total of 12,396 individuals were identified (84% ambulatory care encounters). A total of 6981 individuals (52%) followed up with a repeat measurement. Female patients, non-Hispanic whites, and older individuals were more likely to obtain a repeat measurement. Subsequently, 3668 individuals had chronic kidney disease confirmed. Within 6 months, 1550 patients had chart documentation of their chronic kidney disease and 336 patients had a nephrology consultation. The ambulatory care environment, given its high volume and various prioritizations, is an under-recognized area where diagnostic errors are not uncommon and failure to follow up on abnormal test results can occur routinely. The Kaiser Permanente Southern California Creatinine SureNet program leverages the electronic health records and its multidisciplinary resources in an effort to ensure that patients with potential chronic kidney disease are identified and managed properly. Copyright © 2015 Elsevier Inc. All rights reserved.

  6. Effectiveness of a caregiver education program on providing oral care to individuals with intellectual and developmental disabilities.

    PubMed

    Fickert, Nancy A; Ross, Diana

    2012-06-01

    Caregivers who work in community living arrangements or intermediate care facilities are responsible for the oral hygiene of individuals with intellectual and developmental disabilities. Oral hygiene training programs do not exist in many organizations, despite concerns about the oral care of this population. The purpose of this study was to determine the effectiveness of a caregiver educational program. This study used a quasi-experimental one-group pretest/posttest design with repeated measures to describe the outcomes of an educational program. Program participants demonstrated oral hygiene skills on each other while being scored by a trained observer, after which they completed an oral hygiene compliance survey. After three months, a follow-up included the same posttest, demonstration of oral hygiene skills, and repeat of the compliance survey. Paired-sample t-tests of oral hygiene knowledge showed a statistically significant improvement from pretest to posttest and from pretest to three-month posttest. Oral hygiene skills and compliance improved. Results demonstrate evidence that caregiver education improves knowledge, skill, and compliance in oral hygiene. Further studies are required to demonstrate the value of providing oral hygiene education and training for caregivers of individuals with intellectual and developmental disabilities.

  7. Quality of Life of Adults with Pervasive Developmental Disorders and Intellectual Disabilities

    ERIC Educational Resources Information Center

    Gerber, F.; Baud, M. A.; Giroud, M.; Carminati, G. Galli

    2008-01-01

    The purpose of this study was to observe quality of life (QoL) and global evolution of persons with Pervasive Developmental Disorders (PDD) in three different groups. Individualized programs for PDD were compared to traditional programs for intellectual disabilities. Behavioural disorders were repeatedly evaluated using the Aberrant Behaviour…

  8. A Comparison of Repeater Performance on the MCAT: Review Course Participants vs. Non-Participants.

    ERIC Educational Resources Information Center

    Jackson, Evelyn W.; And Others

    The Medical/Dental Education Preparatory Program (MEDPREP) at Southern Illinois University School of Medicine at Carbondale prepares underrepresented minorities for medical school admission. This paper reports on the evaluation of the MEDPREP Summer Review program by the comparison of participant and non-participant score gains on the Medical…

  9. Effectiveness of Secondary Pregnancy Prevention Programs: A Meta-Analysis

    ERIC Educational Resources Information Center

    Corcoran, Jacqueline; Pillai, Vijayan K.

    2007-01-01

    Because subsequent pregnancy in teen parents often worsens the impact of adolescent parenting; therefore, a common goal of teenage parent programs has been to reduce repeat pregnancy. To examine the impact of this goal, a meta-analysis was conducted on 16 control-comparison group studies that evaluated the effect of teenage pregnancy and parenting…

  10. Who Is Repeating Anatomy? Trends in an Undergraduate Anatomy Course

    ERIC Educational Resources Information Center

    Schutte, Audra F.

    2016-01-01

    Anatomy courses frequently serve as prerequisites or requirements for health sciences programs. Due to the challenging nature of anatomy, each semester there are students remediating the course (enrolled in the course for a second time), attempting to earn a grade competitive for admissions into a program of study. In this retrospective study,…

  11. Maintenance of Cognitive and Behavioral Change Following Weight Loss Programs: Two Examples.

    ERIC Educational Resources Information Center

    Kalodner, Cynthia R.; DeLucia, Janice L.

    The efficacy of behavioral weight loss programs has been systematically evaluated during active treatment and at follow-up intervals. Despite repeated calls for more comprehensive assessment of change, other sources of information about change in behavior, nutritional habits, and thinking patterns are often neglected. These studies examined the…

  12. Beyond Customer Satisfaction: Reexamining Customer Loyalty to Evaluate Continuing Education Programs

    ERIC Educational Resources Information Center

    Hoyt, Jeff E.; Howell, Scott L.

    2011-01-01

    This article provides questionnaire items and a theoretical model of factors predictive of customer loyalty for use by administrators to determine ways to increase repeat purchasing in their continuing education programs. Prior studies in the literature are discussed followed by results of applying the model at one institution and a discussion of…

  13. Chapter 3. Planning and design for habitat monitoring

    Treesearch

    Christina D. Vojta; Lyman L. McDonald; C. Kenneth Brewer; Kevin S. McKelvey; Mary M Rowland; Michael I. Goldstein

    2013-01-01

    This chapter provides guidance for designing a habitat monitoring program so that it will meet the monitoring objective, will be repeatable, and will adequately represent habitat within the spatial extent of interest. Although a number of excellent resources are available for planning and designing a monitoring program for wildlife populations (e.g., Busch and Trexler...

  14. Council for Unity, Inc. 1993-94.

    ERIC Educational Resources Information Center

    Schearer, Mary

    The Council for Unity began in 1975 in response to repeated incidents of interracial violence in a New York City high school. The program's primary goal has been to promote intergroup awareness, sensitivity, and cooperation among groups from diverse ethnic, racial, and religious groups and to reduce bias. The program currently operates in 15 high…

  15. The Gateway to the Profession: Assessing Teacher Preparation Programs Based on Student Achievement. CEDR Working Paper 2012-4

    ERIC Educational Resources Information Center

    Goldhaber, Dan; Liddle, Stephanie; Theobald, Roddy

    2012-01-01

    With teacher quality repeatedly cited as the most important "schooling" factor influencing student achievement, there has been increased interest in examining the efficacy of teacher training programs. This paper presents the results of research investigating the relationship between teachers who graduate from different training programs…

  16. School Compost Programs: Pathways to Success

    ERIC Educational Resources Information Center

    Schumpert, Kary; Dietz, Cyndra

    2012-01-01

    After the oft-repeated three Rs (reduce, reuse, recycle) comes the lesser-known but equally important fourth R: rot. In this case, rot means compost. Classrooms, schools, and school districts can use a number of methods to establish a compost program. The finished product is a valuable soil amendment that adds fertility to local farmland, school…

  17. Survey of School Library Media Programs in Wisconsin. A Brief Report of Statistics, 1994.

    ERIC Educational Resources Information Center

    Sorensen, Richard J.

    In 1994, the Wisconsin Department of Public Instruction repeated its 1988 survey of public school library media programs. Included in this report are statistics considered most significant, and those most often requested. The 147-item survey included questions about staffing, services, operation, automation, and facilities related to the library…

  18. Aboriginal Employment & Training Program Development--Toward an Internally Controlled Process.

    ERIC Educational Resources Information Center

    Stevenson, Phyllis Fay

    A case study was conducted of the Peguis Adult High School program (PAHS), a community-based adult education in a Manitoba First Nation community for repeat dropouts and students who did not fit into regular high school. A literature review of the historical relationship between federal/provincial governments and First Nation communities examined…

  19. Characteristics of Volunteer Coaches in a Clinical Process Improvement Program.

    PubMed

    Morley, Katharine E; Barysauskas, Constance M; Carballo, Victoria; Kalibatas, Orinta; Rao, Sandhya K; Jacobson, Joseph O; Cummings, Brian M

    The Partners Clinical Process Improvement Leadership Program provides quality improvement training for clinicians and administrators, utilizing graduates as volunteer peer coaches for mentorship. We sought to understand the factors associated with volunteer coach participation and gain insight into how to improve and sustain this program. Review of coach characteristics from course database and survey of frequent coaches. Out of 516 Partners Clinical Process Improvement Leadership Program graduates from March 2010 to June 2015, 117 (23%) individuals volunteered as coaches. Sixty-one (52%) individuals coached once, 31 (27%) coached twice, and 25 (21%) coached 3 or more times. There were statistically significant associations between coaching and occupation (P = .005), Partners Clinical Process Improvement Leadership Program course taken (P = .001), and course location (P = .007). Administrators were more likely to coach than physicians (odds ratio: 1.75, P = .04). Reasons for volunteering as a coach included further development of skills, desire to stay involved with program, and enjoying mentoring. Reasons for repeated coaching included maintaining quality improvement skills, expanding skills to a wider variety of projects, and networking. A peer graduate volunteer coach model is a viable strategy for interprofessional quality improvement mentorship. Strategies that support repeat coaching and engage clinicians should be promoted to ensure an experienced and diversified group of coaches.

  20. Development of a Genomic DNA Reference Material Panel for Myotonic Dystrophy Type 1 (DM1) Genetic Testing

    PubMed Central

    Kalman, Lisa; Tarleton, Jack; Hitch, Monica; Hegde, Madhuri; Hjelm, Nick; Berry-Kravis, Elizabeth; Zhou, Lili; Hilbert, James E.; Luebbe, Elizabeth A.; Moxley, Richard T.; Toji, Lorraine

    2014-01-01

    Myotonic dystrophy type 1 (DM1) is caused by expansion of a CTG triplet repeat in the 3′ untranslated region of the DMPK gene that encodes a serine-threonine kinase. Patients with larger repeats tend to have a more severe phenotype. Clinical laboratories require reference and quality control materials for DM1 diagnostic and carrier genetic testing. Well-characterized reference materials are not available. To address this need, the Centers for Disease Control and Prevention-based Genetic Testing Reference Material Coordination Program, in collaboration with members of the genetic testing community, the National Registry of Myotonic Dystrophy and Facioscapulohumeral Muscular Dystrophy Patients and Family Members, and the Coriell Cell Repositories, has established and characterized cell lines from patients with DM1 to create a reference material panel. The CTG repeats in genomic DNA samples from 10 DM1 cell lines were characterized in three clinical genetic testing laboratories using PCR and Southern blot analysis. DMPK alleles in the samples cover four of five DM1 clinical categories: normal (5 to 34 repeats), mild (50 to 100 repeats), classical (101 to 1000 repeats), and congenital (>1000 repeats). We did not identify or establish Coriell cell lines in the premutation range (35 to 49 repeats). These samples are publicly available for quality control, proficiency testing, test development, and research and should help improve the accuracy of DM1 testing. PMID:23680132

  1. CRISPRDetect: A flexible algorithm to define CRISPR arrays.

    PubMed

    Biswas, Ambarish; Staals, Raymond H J; Morales, Sergio E; Fineran, Peter C; Brown, Chris M

    2016-05-17

    CRISPR (clustered regularly interspaced short palindromic repeats) RNAs provide the specificity for noncoding RNA-guided adaptive immune defence systems in prokaryotes. CRISPR arrays consist of repeat sequences separated by specific spacer sequences. CRISPR arrays have previously been identified in a large proportion of prokaryotic genomes. However, currently available detection algorithms do not utilise recently discovered features regarding CRISPR loci. We have developed a new approach to automatically detect, predict and interactively refine CRISPR arrays. It is available as a web program and command line from bioanalysis.otago.ac.nz/CRISPRDetect. CRISPRDetect discovers putative arrays, extends the array by detecting additional variant repeats, corrects the direction of arrays, refines the repeat/spacer boundaries, and annotates different types of sequence variations (e.g. insertion/deletion) in near identical repeats. Due to these features, CRISPRDetect has significant advantages when compared to existing identification tools. As well as further support for small medium and large repeats, CRISPRDetect identified a class of arrays with 'extra-large' repeats in bacteria (repeats 44-50 nt). The CRISPRDetect output is integrated with other analysis tools. Notably, the predicted spacers can be directly utilised by CRISPRTarget to predict targets. CRISPRDetect enables more accurate detection of arrays and spacers and its gff output is suitable for inclusion in genome annotation pipelines and visualisation. It has been used to analyse all complete bacterial and archaeal reference genomes.

  2. Genetic population structure of the lionfish Pterois miles (Scorpaenidae, Pteroinae) in the Gulf of Aqaba and northern Red Sea.

    PubMed

    Kochzius, Marc; Blohm, Dietmar

    2005-03-14

    The aim of this study is to reveal gene flow between populations of the coral reef dwelling lionfish Pterois miles in the Gulf of Aqaba and northern Red Sea. Due to the fjord-like hydrography and topology of the Gulf of Aqaba, isolation of populations might be possible. Analysis of 5' mitochondrial control region sequences from 94 P. miles specimens detected 32 polymorphic sites, yielding 38 haplotypes. Sequence divergence among different haplotypes ranged from 0.6% to 9.9% and genetic diversity was high (h=0.85, pi=1.9%). AMOVA indicates panmixia between the Gulf of Aqaba and northern Red Sea, but analysis of migration pattern shows an almost unidirectional migration originating from the Red Sea.

  3. Variation of Static-PPP Positioning Accuracy Using GPS-Single Frequency Observations (Aswan, Egypt)

    NASA Astrophysics Data System (ADS)

    Farah, Ashraf

    2017-06-01

    Precise Point Positioning (PPP) is a technique used for position computation with a high accuracy using only one GNSS receiver. It depends on highly accurate satellite position and clock data rather than broadcast ephemeries. PPP precision varies based on positioning technique (static or kinematic), observations type (single or dual frequency) and the duration of collected observations. PPP-(dual frequency receivers) offers comparable accuracy to differential GPS. PPP-single frequency receivers has many applications such as infrastructure, hydrography and precision agriculture. PPP using low cost GPS single-frequency receivers is an area of great interest for millions of users in developing countries such as Egypt. This research presents a study for the variability of single frequency static GPS-PPP precision based on different observation durations.

  4. Advancing the Explicit Representation of Lake Processes in WRF-Hydro

    NASA Astrophysics Data System (ADS)

    Yates, D. N.; Read, L.; Barlage, M. J.; Gochis, D.

    2017-12-01

    Realistic simulation of physical processes in lakes is essential for closing the water and energy budgets in a coupled land-surface and hydrologic model, such as the Weather Research and Forecasting (WRF) model's WRF-Hydro framework. A current version of WRF-Hydro, the National Water Model (NWM), includes 1,506 waterbodies derived from the National Hydrography Database, each of which is modeled using a level-pool routing scheme. This presentation discusses the integration of WRF's one-dimensional lake model into WRF-Hydro, which is used to estimate waterbody fluxes and thus explicitly represent latent and sensible heat and the mass balance occurring over the lakes. Results of these developments are presented through a case study from Lake Winnebago, Wisconsin. Scalability and computational benchmarks to expand to the continental-scale NWM are discussed.

  5. Creation of next generation U.S. Geological Survey topographic maps

    USGS Publications Warehouse

    Craun, Kari J.

    2010-01-01

    The U.S. Geological Survey (USGS) is 2 years into a 3-year cycle to create new digital topographic map products for the conterminous United States from data acquired and maintained as part of The National Map databases. These products are in the traditional, USGS topographic quadrangle, 7.5-minute (latitude and longitude) cell format. The 3-year cycle was conceived to follow the acquisition of National Aerial Imagery Program (NAIP) orthorectified imagery, a key layer in the new product. In fiscal year (FY) 2009 (ending September 30, 2009), the first year of the 3-year cycle, the USGS produced 13,200 products. These initial products of the “Digital MapBeta” series had limited feature content, including only the NAIP image, some roads, geographic names, and grid and collar information. The products were created in layered georegistered Portable Document Format (PDF) files, allowing users with freely available Adobe® Reader® software to view, print, and perform simple Geographic Information System-like functions. In FY 2010 (ending September 30, 2010), the USGS produced 20,380 products. These products of the “US Topo” series added hydrography (surface water features), contours, and some boundaries. In FY 2011 (ending September 30, 2011), the USGS will complete the initial coverage with US Topo products and will add additional feature content to the maps. The design, development, and production associated with the US Topo products provide management and technical challenges for the USGS and its public and private sector partners. One challenge is the acquisition and maintenance of nationally consistent base map data from multiple sources. Another is the use of these data to create a consistent, current series of cartographic products that can be used by the broad spectrum of traditional topographic map users. Although the USGS and its partners have overcome many of these challenges, many, such as establishing and funding a sustainable base data-maintenance program, remain to be resolved for the long term.

  6. Coal and Open-pit surface mining impacts on American Lands (COAL)

    NASA Astrophysics Data System (ADS)

    Brown, T. A.; McGibbney, L. J.

    2017-12-01

    Mining is known to cause environmental degradation, but software tools to identify its impacts are lacking. However, remote sensing, spectral reflectance, and geographic data are readily available, and high-performance cloud computing resources exist for scientific research. Coal and Open-pit surface mining impacts on American Lands (COAL) provides a suite of algorithms and documentation to leverage these data and resources to identify evidence of mining and correlate it with environmental impacts over time.COAL was originally developed as a 2016 - 2017 senior capstone collaboration between scientists at the NASA Jet Propulsion Laboratory (JPL) and computer science students at Oregon State University (OSU). The COAL team implemented a free and open-source software library called "pycoal" in the Python programming language which facilitated a case study of the effects of coal mining on water resources. Evidence of acid mine drainage associated with an open-pit coal mine in New Mexico was derived by correlating imaging spectrometer data from the JPL Airborne Visible/InfraRed Imaging Spectrometer - Next Generation (AVIRIS-NG), spectral reflectance data published by the USGS Spectroscopy Laboratory in the USGS Digital Spectral Library 06, and GIS hydrography data published by the USGS National Geospatial Program in The National Map. This case study indicated that the spectral and geospatial algorithms developed by COAL can be used successfully to analyze the environmental impacts of mining activities.Continued development of COAL has been promoted by a Startup allocation award of high-performance computing resources from the Extreme Science and Engineering Discovery Environment (XSEDE). These resources allow the team to undertake further benchmarking, evaluation, and experimentation using multiple XSEDE resources. The opportunity to use computational infrastructure of this caliber will further enable the development of a science gateway to continue foundational COAL research.This work documents the original design and development of COAL and provides insight into continuing research efforts which have potential applications beyond the project to environmental data science and other fields.

  7. Hydrodynamic Environment and Ecosystem Diversity at two Deep-Sea Marine Protected Areas in Southern Biscay

    NASA Astrophysics Data System (ADS)

    González-Pola, C.; Ivey, G. N.; Jones, N. L.; Sanchez, F.; Kelly, S. M.; Bluteau, C.; Somavilla, R.

    2016-02-01

    Two nearby offshore deep sea areas in Southern Bay of Biscay (northern Spain), hosting valuable ecosystems, have been recently declared marine protected areas. The first one is Le Danois Bank, a seamount-like feature connected to the continental shelf by a saddle. The second one is the Aviles Canyon System (ACS) that breaks the continuity of the northern Spanish continental shelf. A number of observational multidisciplinary programs carried out within the last decade allowed a detailed identification of habitats and biological communities. As a long-term goal these programs aimed to understand the ecosystem functioning as a whole with the implicit focus in associated circulation and dynamics. The observational record includes deep sea photogrametry as well as standard hydrography and long-term mooring lines. A lander system provided high-frequency currents and thermal structure tens meters above bottom together with time lapse photographs at selected sites. Different characteristic habitats from sedimentary to rocky, associated with different fisheries, were described both in Le Danois Bank and the ACS. These include sponge aggregations and deep water corals. Noteworthy structured coral reefs only appeared in a relatively small area in one of the tributaries of the ACS (La Gaviera Canyon), where local near-bottom currents were stronger than anywhere else in the region. The development and violent breaking of an internal tidal bore was the main feature of such hotspot. Analytic estimates confirmed that La Gaviera is the only canyon were large patches of the seafloor are critical or near-critical to the semidiurnal internal tide and nearby upper flanks show also large patches of critical seafloor and large body forcing. A year-long near-bottom current record captured the development of three benthic storms, events lasting several days in which currents increases up to 3-fold the tidal max speeds and direction swings rapidly, losing the uniformity of tidal regime.

  8. The Effects of Aquatic Plyometric Training on Repeated Jumps, Drop Jumps and Muscle Damage.

    PubMed

    Jurado-Lavanant, A; Alvero-Cruz, J R; Pareja-Blanco, F; Melero-Romero, C; Rodríguez-Rosell, D; Fernandez-Garcia, J C

    2015-09-22

    The purpose of this study was to compare the effects of land- vs. aquatic based plyometric training programs on the drop jump, repeated jump performance and muscle damage. Sixty-five male students were randomly assigned to one of 3 groups: aquatic plyometric training group (APT), plyometric training group (PT) and control group (CG). Both experimental groups trained twice a week for 10 weeks performing the same number of sets and total jumps. The following variables were measured prior to, halfway through and after the training programs: creatine kinase (CK) concentration, maximal height during a drop jump from the height of 30 (DJ30) and 50 cm (DJ50), and mean height during a repeated vertical jump test (RJ). The training program resulted in a significant increase (P<0.01-0.001) in RJ, DJ30, and DJ50 for PT, whereas neither APT nor CG reached any significant improvement APT showed likely/possibly improvements on DJ30 and DJ50, respectively. Greater intra-group Effect Size in CK was found for PT when compared to APT. In conclusion, although APT seems to be a safe alternative method for reducing the stress produced on the musculoskeletal system by plyometric training, PT produced greater gains on reactive jumps performance than APT. © Georg Thieme Verlag KG Stuttgart · New York.

  9. Comparison of Walking, Muscle Strength, Balance, and Fear of Falling Between Repeated Fall Group, One-time Fall Group, and Nonfall Group of the Elderly Receiving Home Care Service.

    PubMed

    Jeon, MiYang; Gu, Mee Ock; Yim, JongEun

    2017-12-01

    The purpose of this study was to provide information to develop a program to prevent repeated falls by analyzing the difference in gait, muscle strength, balance, and fear of falling according to their fall experience. The study subjects were 110 elderly individuals aged over 60 years who agreed to their participation in this research. The study participants were categorized into a repeated fall group (n = 40), a one-time fall group (n = 15), and a nonfall group (n = 46) of the elderly. Measurements of gait, muscle strength, balance, and fear of falling were taken in each group. With regard to gait, there were significant differences among three groups in gait cycle (F = 3.50, p = .034), speed (F = 13.06, p < .001), and cadence (F = 5.59, p = .005). Regarding muscle strength in the upper and lower limbs, statistically significant differences were shown among three groups in muscle strength of upper (F = 16.98, p < .001) and lower (F = 10.55, p < .001) limbs. With regard to balance, the nonfall group had significantly greater results than the one-time fall group and repeated fall group in dynamic balance (F = 10.80, p < .001) and static balance (F = 8.20, p = .001). In the case of the fear of falling, the repeated fall group had significantly higher score than other two groups (F = 20.62, p < .001). This study suggests that intervention program should be tailored to fall risk factors to enhance gait and balance and lower body muscle strength and reduce the fear of falling to prevent repeated incidences of falls in this population. Copyright © 2017. Published by Elsevier B.V.

  10. Health Experts Assail Colleges for Wasting Opportunity to Lead AIDS-Education Drive Among Students.

    ERIC Educational Resources Information Center

    Biemiller, Lawrence

    1987-01-01

    AIDS education is seen as the moral and ethical obligation of colleges and to be effective it must be aimed at changing behavior and repeated in different formats. The more effective the program, the more controversial it might be, because effective programs admit that there's explorational behavior by students. (MLW)

  11. Research Trends of EFL Students in English Education Program: A 2005-2015 Survey

    ERIC Educational Resources Information Center

    Iftanti, Erna; Shofiya, Arina

    2017-01-01

    One of the purposes of English Education Program of State Islamic Institute of Tulungagung, Indonesia, is to lead the graduates to do research on linguistics and language teaching and to write a thesis accordingly. However, the preliminary study shows that there is some repeatedly research on the same topics, because the students commonly spend…

  12. Changes to the hydrography and zooplankton in the northern California Current in response to `the Blob'of 2014-2015

    NASA Astrophysics Data System (ADS)

    Peterson, W. T.

    2016-02-01

    Fortnightly measurements of hydrography and zooplankton species composition have been sustained along the Newport Hydrographic line since 1996. From this 20 year time series we have established that zooplankton abundance and species composition closely tracks the phase of the Pacific Decadal Oscillation and the El Nino Southern Oscillation. During positive (warm) phase of the PDO, a warm water `southern' subtropical coastal community is found whereas during negative (cold) phase a cold water `northern'coastal community dominates. The Blob though was a rule-changer. The Blob began to move slowly ashore at Newport on 14 September 2014 with the seasonal relaxation of upwelling, and within 5 h SST increased 6°C to 19.4°C. On the 25 and 30 September cruises, copepod species richness increased as well, with an anomaly of 2 and 9 species respectively, greater than the 20 year climatology for September. We continued to monitor the plankton throughout the autumn 2014 and winter, spring and summer 2015 and found a total of seventeen copepod species that were either new to Oregon or have occurred only rarely in the past. Many of these species are oceanic with sub-tropical or tropical affinities thus are indicators of tropical waters, suggesting that the Blob water which came ashore in central Oregon had its origins offshore rather than from coastal waters to the south. Some of the copepod species that were new or rarely seen included Subeucalanus crassus, Eucalanus hyalinus, Mecynocera clausi, Calocalanus pavo, Centropages bradyii, and Pleuromamma borealis and P. xiphias. Krill biomass was the lowest in our 20 year time series. The southern California Current neritic krill species Nyctiphanes simplex appears off Oregon during major El Niño events (1983, 1998), but none were seen during The Blob event which again suggests that the origin of the Blob water which appeared off Oregon was from far offshore, not from coastal waters to the south. Note in the figure below that species richness during the Blob period was greater than that observed during the 1997-98 El Nino and lesser El Nino events in 2003-2005 and 2009-10.

  13. Streamflow gain/loss in the Republican River basin, Nebraska, March 1989

    USGS Publications Warehouse

    Johnson, Michaela R.; Stanton, Jennifer S.; Cornwall, James F.; Landon, Matthew K.

    2002-01-01

    This arc and point data set contains streamflow measurement sites and reaches indicating streamflow gain or loss under base-flow conditions along the Republican River and tributaries in Nebraska during March 21 to 22, 1989 (Boohar and others, 1990). These measurements were made to obtain data on ground-water/surface-water interaction. Flow was visually observed to be zero, was measured, or was estimated at 136 sites. The measurements were made on the main stem of the Republican River and all flowing tributaries that enter the Republican River above Swanson Reservoir and parts of the Frenchman, Red Willow, and Medicine Creek drainages in the Nebraska part of the Republican River Basin. Tributaries were followed upstream until the first road crossing where zero flow was encountered. For selected streams, points of zero flow upstream of the first zero flow site were also checked. Streamflow gain or loss for each stream reach was calculated by subtracting the streamflow values measured at the upstream end of the reach and values for contributing tributaries from the downstream value. The data obtained reflected base-flow conditions suitable for estimating streamflow gains and losses for stream reaches between sites. This digital data set was created by manually plotting locations of streamflow measurements. These points were used to designate stream-reach segments to calculate gain/loss per river mile. Reach segments were created by manually splitting the lines from a 1:250,000 hydrography data set (Soenksen and others, 1999) at every location where the streams were measured. Each stream-reach segment between streamflow-measurement sites was assigned a unique reach number. All other lines in the hydrography data set without reach numbers were omitted. This data set was created to archive the calculated streamflow gains and losses of selected streams in part of the Republican River Basin, Nebraska in March 1989, and make the data available for use with geographic information systems (GIS). If measurement sites are used separately from reaches, the maximum scale of 1:100,000 should not be exceeded. When used in conjunction with the reach segments, the maximum scale should not exceed 1:250,000.

  14. Using a spatially structured life cycle model to assess the influence of multiple stressors on an exploited coastal-nursery-dependent population

    NASA Astrophysics Data System (ADS)

    Archambault, B.; Rivot, E.; Savina, M.; Le Pape, O.

    2018-02-01

    Exploited coastal-nursery-dependent fish species are subject to various stressors occurring at specific stages of the life cycle: climate-driven variability in hydrography determines the success of the first eggs/larvae stages; coastal nursery habitat suitability controls juvenile growth and survival; and fisheries target mostly adults. A life cycle approach was used to quantify the relative influence of these stressors on the Eastern English Channel (EEC) population of the common sole (Solea solea), a coastal-nursery-dependent flatfish population which sustains important fisheries. The common sole has a complex life cycle: after eggs hatch, larvae spend several weeks drifting in open water. Survivors go on to metamorphose into benthic fish. Juveniles spend the first two years of their life in coastal and estuarine nurseries. Close to maturation, they migrate to deeper areas, where different subpopulations supplied by different nurseries reproduce and are exploited by fisheries. A spatially structured age-and stage-based hierarchical Bayesian model integrating various aspects of ecological knowledge, data sources and expert knowledge was built to quantitatively describe this complex life cycle. The model included the low connectivity among three subpopulations in the EEC, the influence of hydrographic variability, the availability of suitable juvenile habitat and fisheries. Scenarios were designed to quantify the effects of interacting stressors on population renewal. Results emphasized the importance of coastal nursery habitat availability and quality for the population renewal. Realistic restoration scenarios of the highly degraded Seine estuary produced a two-third increase in catch potential for the adjacent subpopulation. Fisheries, however, remained the main source of population depletion. Setting fishing mortality to the maximum sustainable yield led to substantial increases in biomass (+100%) and catch (+33%) at the EEC scale. The approach also showed how climate-driven variability in hydrography is likely to interact with human pressures, e.g., overfishing increased the sensitivity to unfavourable conditions. Our results provided insights into the dynamics of numerous exploited coastal-nursery-dependent species while paving the way toward more robust advice for sustainable management of these resources.

  15. A modern vs. Permian black shale - the hydrography, primary productivity, and water-column chemistry of deposition

    USGS Publications Warehouse

    Piper, D.Z.; Perkins, R.B.

    2004-01-01

    The sediment currently accumulating in the Cariaco Basin, on the continental shelf of Venezuela, has an elevated organic-carbon content of approximately 5%; is accumulating under O2-depleted bottom-water conditions (SO42- reduction); is composed dominantly of foraminiferal calcite, diatomaceous silica, clay, and silt; and is dark greenish gray in color. Upon lithification, it will become a black shale. Recent studies have established the hydrography of the basin and the level of primary productivity and bottom-water redox conditions. These properties are used to model accumulation rates of Cd, Cr, Cu, Mo, Ni, V, and Zn on the seafloor. The model rates agree closely with measured rates for the uppermost surface sediment.The model is applied to the Meade Peak Phosphatic Shale Member of the Phosphoria Formation, a phosphate deposit of Permian age in the northwest United States. It too has all of the requisite properties of a black shale. Although the deposit is a world-class phosphorite, it is composed mostly of phosphatic mudstone and siltstone, chert, limestone, and dolomite. It has organic-carbon concentrations of up to 15%, is strongly enriched in several trace elements above a terrigenous contribution and is black. The trace-element accumulation defines a mean primary productivity in the photic zone of the Phosphoria Basin as moderate, at 500 g m-2 year-1 organic carbon, comparable to primary productivity in the Cariaco Basin. The source of nutrient-enriched water that was imported into the Phosphoria Basin, upwelled into the photic zone, and supported primary productivity was an O2 minimum zone of the open ocean. The depth range over which the water was imported would have been between approximately 100 and 600 m. The mean residence time of bottom water in the basin was approximately 4 years vs. 100 years in the Cariaco Basin. The bottom water was O2 depleted, but it was denitrifying, or NO3- reducing, rather than SO42- reducing. Published by Elsevier B.V.

  16. A high-resolution record of Holocene millennial-scale oscillations of surface water, foraminiferal paleoecology and sediment redox chemistry in the SE Brazilian margin

    NASA Astrophysics Data System (ADS)

    Dias, B. B.; Barbosa, C. F.; Albuquerque, A. L.; Piotrowski, A. M.

    2014-12-01

    Holocene millennial-scale oscillations and Bond Events (Bond et al. 1997) are well reported in the North Atlantic as consequence of fresh water input and weaking of the Atlantic Meridional Overturning Circulation (AMOC). It has been hypothesized that the effect of weaking of AMOC would lead to warming in the South Atlantic due to "heat piracy", causing surface waters to warm and a reorganization of surface circulation. There are few reconstructions of AMOC strength in the South Atlantic, and none with a high resolution Holocene record of changes of productivity and the biological pump. We reconstruct past changes in the surface water mass hydrography, productivity, and sediment redox changes in high-resolution in the core KCF10-01B, located 128 mbsl water depth off Cabo Frio, Brazil, a location where upwelling is strongly linked to surface ocean hydrography. We use Benthic Foraminiferal Accumulation Rate (BFAR) to reconstruct productivity, which reveals a 1.3kyr cyclicity during the mid- and late-Holocene. The geochemistry of trace and rare earth elements on foraminiferal Fe-Mn oxide coatings show changes in redox-sensitive elements indicating that during periods of high productivity there were more reducing conditions in sediment porewaters, producing a Ce anomaly and reduction and re-precipitation of Mn oxides. Bond events 1-7 were identified by a productivity increase along with reducing sediment conditions which was likely caused by Brazil Current displacement offshore allowing upwelling of the nutritive bottom water South Atlantic Central Waters (SACW) to the euphotic zone and a stronger local biological pump. In a global context, correlation with other records show that this occurred during weakened AMOC and southward displacement of the ITCZ. We conclude that Bond climatic events and millennial-scale variability of AMOC caused sea surface hydrographic changes off the Brazilian Margin leading to biological and geochemical changes recorded in coastal records. The 8.2kyr climatic event is reported here for the first time in South American coastal sediment records as high productivity conditions and a rapid change in porewater redox chemistry.

  17. A marine biogeochemical perspective on black shale deposition

    NASA Astrophysics Data System (ADS)

    Piper, D. Z.; Calvert, S. E.

    2009-06-01

    Deposition of marine black shales has commonly been interpreted as having involved a high level of marine phytoplankton production that promoted high settling rates of organic matter through the water column and high burial fluxes on the seafloor or anoxic (sulfidic) water-column conditions that led to high levels of preservation of deposited organic matter, or a combination of the two processes. Here we review the hydrography and the budgets of trace metals and phytoplankton nutrients in two modern marine basins that have permanently anoxic bottom waters. This information is then used to hindcast the hydrography and biogeochemical conditions of deposition of a black shale of Late Jurassic age (the Kimmeridge Clay Formation, Yorkshire, England) from its trace metal and organic carbon content. Comparison of the modern and Jurassic sediment compositions reveals that the rate of photic zone primary productivity in the Kimmeridge Sea, based on the accumulation rate of the marine fraction of Ni, was as high as 840 g organic carbon m - 2 yr -1. This high level was possibly tied to the maximum rise of sea level during the Late Jurassic that flooded this and other continents sufficiently to allow major open-ocean boundary currents to penetrate into epeiric seas. Sites of intense upwelling of nutrient-enriched seawater would have been transferred from the continental margins, their present location, onto the continents. This global flooding event was likely responsible for deposition of organic matter-enriched sediments in other marine basins of this age, several of which today host major petroleum source rocks. Bottom-water redox conditions in the Kimmeridge Sea, deduced from the V:Mo ratio in the marine fraction of the Kimmeridge Clay Formation, varied from oxic to anoxic, but were predominantly suboxic, or denitrifying. A high settling flux of organic matter, a result of the high primary productivity, supported a high rate of bacterial respiration that led to the depletion of O 2 in the bottom water. A high rate of burial of labile organic matter, albeit a low percentage of primary productivity, in turn promoted anoxic conditions in the sediment pore waters that enhanced retention of trace metals deposited from the water column.

  18. A Military-Relevant Model of Closed Concussive Head Injury: Longitudinal Studies Characterizing and Validating Single and Repetitive mTBI

    DTIC Science & Technology

    2014-10-01

    Research Program (CCCRP). Provided in this Year 2 Annual Report are the results of our Phase I studies focused on characterizing the neuropathologic...effects of a single concussive impact to repeated concussive impacts using the PCI model. Phase I studies have been completed and these results set...the foundation for Phase II studies designed to evaluate the effects of repeated concussions that occur prior to and after the resolution of the

  19. How training citizen scientists affects the accuracy and precision of phenological data

    NASA Astrophysics Data System (ADS)

    Feldman, Richard E.; Žemaitė, Irma; Miller-Rushing, Abraham J.

    2018-05-01

    Monitoring plant and animal phenology is a critical step to anticipating and predicting changes in species interactions and biodiversity. Because phenology necessarily involves frequent and repeated observations over time, citizen scientists have become a vital part of collecting phenological data. However, there is still concern over the accuracy and precision of citizen science data. It is possible that training citizen scientists can improve data quality though there are few comparisons of trained and untrained citizen scientists in the ability of each to accurately and precisely measure phenology. We assessed how three types of observers—experts, trained citizen scientists that make repeated observations, and untrained citizen scientists making once-per-year observations—differ in quantifying temporal change in flower and fruit abundance of American mountain ash trees (Sorbus americana Marsh.) and arthropods in Acadia National Park, Maine, USA. We found that trained more so than untrained citizen science observers over- or under-estimated abundances leading to precise but inaccurate characterizations of phenological patterns. Our results suggest a new type of bias induced by repeated observations: A type of learning takes place that reduces the independence of observations taken on different trees or different dates. Thus, in this and many other cases, having individuals make one-off observations of marked plants may produce data as good if not better than individuals making repeated observations. For citizen science programs related to phenology, our results underscore the importance of (a) attracting the most number of observers possible even if they only make one observation, (b) producing easy-to-use and informative data sheets, and (c) carefully planning effective training programs that are, perhaps, repeated at different points during the data collection period.

  20. How training citizen scientists affects the accuracy and precision of phenological data.

    PubMed

    Feldman, Richard E; Žemaitė, Irma; Miller-Rushing, Abraham J

    2018-05-07

    Monitoring plant and animal phenology is a critical step to anticipating and predicting changes in species interactions and biodiversity. Because phenology necessarily involves frequent and repeated observations over time, citizen scientists have become a vital part of collecting phenological data. However, there is still concern over the accuracy and precision of citizen science data. It is possible that training citizen scientists can improve data quality though there are few comparisons of trained and untrained citizen scientists in the ability of each to accurately and precisely measure phenology. We assessed how three types of observers-experts, trained citizen scientists that make repeated observations, and untrained citizen scientists making once-per-year observations-differ in quantifying temporal change in flower and fruit abundance of American mountain ash trees (Sorbus americana Marsh.) and arthropods in Acadia National Park, Maine, USA. We found that trained more so than untrained citizen science observers over- or under-estimated abundances leading to precise but inaccurate characterizations of phenological patterns. Our results suggest a new type of bias induced by repeated observations: A type of learning takes place that reduces the independence of observations taken on different trees or different dates. Thus, in this and many other cases, having individuals make one-off observations of marked plants may produce data as good if not better than individuals making repeated observations. For citizen science programs related to phenology, our results underscore the importance of (a) attracting the most number of observers possible even if they only make one observation, (b) producing easy-to-use and informative data sheets, and (c) carefully planning effective training programs that are, perhaps, repeated at different points during the data collection period.

  1. Development of a genomic DNA reference material panel for myotonic dystrophy type 1 (DM1) genetic testing.

    PubMed

    Kalman, Lisa; Tarleton, Jack; Hitch, Monica; Hegde, Madhuri; Hjelm, Nick; Berry-Kravis, Elizabeth; Zhou, Lili; Hilbert, James E; Luebbe, Elizabeth A; Moxley, Richard T; Toji, Lorraine

    2013-07-01

    Myotonic dystrophy type 1 (DM1) is caused by expansion of a CTG triplet repeat in the 3' untranslated region of the DMPK gene that encodes a serine-threonine kinase. Patients with larger repeats tend to have a more severe phenotype. Clinical laboratories require reference and quality control materials for DM1 diagnostic and carrier genetic testing. Well-characterized reference materials are not available. To address this need, the Centers for Disease Control and Prevention-based Genetic Testing Reference Material Coordination Program, in collaboration with members of the genetic testing community, the National Registry of Myotonic Dystrophy and Facioscapulohumeral Muscular Dystrophy Patients and Family Members, and the Coriell Cell Repositories, has established and characterized cell lines from patients with DM1 to create a reference material panel. The CTG repeats in genomic DNA samples from 10 DM1 cell lines were characterized in three clinical genetic testing laboratories using PCR and Southern blot analysis. DMPK alleles in the samples cover four of five DM1 clinical categories: normal (5 to 34 repeats), mild (50 to 100 repeats), classical (101 to 1000 repeats), and congenital (>1000 repeats). We did not identify or establish Coriell cell lines in the premutation range (35 to 49 repeats). These samples are publicly available for quality control, proficiency testing, test development, and research and should help improve the accuracy of DM1 testing. Copyright © 2013 American Society for Investigative Pathology. Published by Elsevier Inc. All rights reserved.

  2. Effects of a Brief Empowerment Program for Families of Persons with Mental Illness in South Korea: A Pilot Study.

    PubMed

    Hyun, Myung-Sun; Nam, Kyoung A; Kim, Hyunlye

    2018-05-30

    Families of persons with mental illness (PMIs) are considered important resources for PMIs rather than as contributors to their mental illness. However, these families experience not only the burden of caregiving but also social stigma and discrimination in various aspects of their lives, and their psychosocial needs tend to be overlooked. This was a pilot study to explore the effects of a brief empowerment program on the empowerment and quality of life of families of PMIs in South Korea. A repeated-measures design with a control group and pre/post-follow-up testing was used. We enrolled 18 participants (experimental group = 9, control group = 9). The experimental group participated in an empowerment program consisting of four sessions over 4 weeks. Data were collected before and after the program, and again 4 weeks later. The χ 2 -test, Fisher's exact probability test, t-test, and repeated-measures analysis of covariance were used, as appropriate, to analyze data. The program significantly increased empowerment (F = 4.66, p = .020) and quality of life (F = 5.83, p = .009) among participants in the experimental group over time. Its therapeutic features, such as sharing their experiences, discussion, and presentations, can be applied to create effective psychosocial interventions for families of PMIs.

  3. Use of the LUS in sequence allele designations to facilitate probabilistic genotyping of NGS-based STR typing results.

    PubMed

    Just, Rebecca S; Irwin, Jodi A

    2018-05-01

    Some of the expected advantages of next generation sequencing (NGS) for short tandem repeat (STR) typing include enhanced mixture detection and genotype resolution via sequence variation among non-homologous alleles of the same length. However, at the same time that NGS methods for forensic DNA typing have advanced in recent years, many caseworking laboratories have implemented or are transitioning to probabilistic genotyping to assist the interpretation of complex autosomal STR typing results. Current probabilistic software programs are designed for length-based data, and were not intended to accommodate sequence strings as the product input. Yet to leverage the benefits of NGS for enhanced genotyping and mixture deconvolution, the sequence variation among same-length products must be utilized in some form. Here, we propose use of the longest uninterrupted stretch (LUS) in allele designations as a simple method to represent sequence variation within the STR repeat regions and facilitate - in the nearterm - probabilistic interpretation of NGS-based typing results. An examination of published population data indicated that a reference LUS region is straightforward to define for most autosomal STR loci, and that using repeat unit plus LUS length as the allele designator can represent greater than 80% of the alleles detected by sequencing. A proof of concept study performed using a freely available probabilistic software demonstrated that the LUS length can be used in allele designations when a program does not require alleles to be integers, and that utilizing sequence information improves interpretation of both single-source and mixed contributor STR typing results as compared to using repeat unit information alone. The LUS concept for allele designation maintains the repeat-based allele nomenclature that will permit backward compatibility to extant STR databases, and the LUS lengths themselves will be concordant regardless of the NGS assay or analysis tools employed. Further, these biologically based, easy-to-derive designations uphold clear relationships between parent alleles and their stutter products, enabling analysis in fully continuous probabilistic programs that model stutter while avoiding the algorithmic complexities that come with string based searches. Though using repeat unit plus LUS length as the allele designator does not capture variation that occurs outside of the core repeat regions, this straightforward approach would permit the large majority of known STR sequence variation to be used for mixture deconvolution and, in turn, result in more informative mixture statistics in the near term. Ultimately, the method could bridge the gap from current length-based probabilistic systems to facilitate broader adoption of NGS by forensic DNA testing laboratories. Copyright © 2018 The Authors. Published by Elsevier B.V. All rights reserved.

  4. The 1970/71 spectral data management programs

    NASA Technical Reports Server (NTRS)

    Marshall, A. A.

    1971-01-01

    The data management programs used by the Stanford Remote Sensing Laboratory to access, modify, and reduce the data obtained from both the NASA IR airborne spectrometer, and Stanford's SG-4 field spectrometer are reported. Many details covered in previous reports are not repeated. References are provided. These programs are written in FORTRAN 4 and S/360 Assembler Language, and are currently running on a S/360 model 67 (operating under OS/MFT) at the Stanford Computation Center Campus Facility.

  5. The intensification of northern component deepwater formation during the mid-Pleistocene climate transition

    NASA Astrophysics Data System (ADS)

    Poirier, Robert K.; Billups, Katharina

    2014-11-01

    We reconstruct mid-Pleistocene (marine isotope stages (MISs) 13-18) deepwater hydrography at Ocean Drilling Program Site 1063 (4583 m water depth, subtropical North Atlantic) using benthic foraminiferal stable isotope records. These new records complete an 900 kyr long stratigraphy spanning MISs 8-29 ( 250-1030 Ka) when combined with previously published records from Site 1063. The results indicate a change in the circulation regime of the abyssal subtropical North Atlantic during MIS 17. Prior to MIS 17, no significant glacial or interglacial δ13C gradients are evident between Site 1063 and the deep South Atlantic. After MIS 17, interglacial intervals at Site 1063 are characterized by δ13C values that consistently approach those recorded in the deep North Atlantic. Comparing Site 1063 δ13C values to 26 additional published records throughout the entire Atlantic basin supports the idea that this δ13C increase is unique to the deep North Atlantic. After MIS 17, the basin-wide influence of higher δ13C values suggests an increased relative flux of northern sourced bottom waters during interglacial periods. The timing of northern sourced water influence at Site 1063 is consistent with the timing of a shift in the orientation of the Arctic Front. Thus, this shift may signify a link between the northward penetration of relatively warm, saline surface waters into the Norwegian-Greenland Seas stimulating deep convection. Our findings fit well with the model of Imbrie et al. (1993) for the importance of the Nordic heat pump in establishing strong 100 kyr cyclicity in late Pleistocene glacial cycles.

  6. Introduction to Programming in Logo Using LogoWriter. Revised Edition.

    ERIC Educational Resources Information Center

    Yoder, Sharon Burrowes

    This book is designed to teach LogoWriter, a programming language. Each of the 41 small chapters focuses on a particular LogoWriter word or idea, and provides examples for practice and experimentation. Topics included are: (1) getting started with LogoWriter; (2) using repeat and label; (3) using color and random, shapes and stamp, fill and shade;…

  7. A Study on EFL Students' Use of E-Learning Programs for Learning English--Taking a Taiwanese University as an Example

    ERIC Educational Resources Information Center

    Soong, Darcy

    2012-01-01

    With its characteristics of repeated practice and easy review, e-Learning programs have been hailed as an effective way for learning foreign languages nowadays. Supported by ICT (Information & Communication Technology), e-Learning offers students self-paced learning whereby learners can control their schedules and it is presumed to be a…

  8. Training Peer Sexual Health Educators: Changes in Knowledge, Counseling Self-Efficacy, and Sexual Risk Behavior

    ERIC Educational Resources Information Center

    Ehrhardt, Britt L.; Krumboltz, John D.; Koopman, Cheryl

    2007-01-01

    Peer sexual health education programs are widespread on college campuses, but little research has assessed the effect of these programs on the peer educators. This study employed a repeated measures design to examine changes over the academic quarter in the knowledge, counseling self-efficacy, and sexual behavior of 70 college students enrolled in…

  9. Is Energy Conservation Education Effective? An Evaluation of the Powersave Schools Program

    ERIC Educational Resources Information Center

    DiMatteo, Julie; Radnitz, Cynthia; Zibulsky, Jamie; Brown, Jeffrey; Deleasa, Courtney; Jacobs, Stephanie

    2014-01-01

    To strengthen energy conservation knowledge and behaviors in youth, the PowerSave Schools Program (PSP) instructs students using hands-on projects. However, there is a lack of empirical support for the PSP. The present study is the first to use a repeated measures design to assess its effectiveness in two school districts. In District 1, there was…

  10. Using Curriculum Based Measures To Identify and Monitor Progress in an Adult Basic Education Program. Final Report.

    ERIC Educational Resources Information Center

    Bean, Rita M.; And Others

    The purpose of a project was to develop and test curriculum-based procedures and measures to monitor and assess the reading and writing progress of adults in a basic education program. The most efficient, reliable, and feasible measure of reading performance from beginning reading level through eighth-grade level was the repeated oral reading…

  11. Understory vegetation data quality assessment for the Interior West Forest and Inventory Analysis program

    Treesearch

    Paul L. Patterson; Renee A. O' Brien

    2011-01-01

    The Interior West Forest Inventory and Analysis (IW-FIA) program of the USDA Forest Service collects field data on understory vegetation structure that have broad applications. In IW-FIA one aspect of quality assurance is assessed based on the repeatability of field measurements. The understory vegetation protocol consists of two suites of measurements; (1) the...

  12. Effects of exergaming based exercise on urban children's physical activity participation and body composition.

    PubMed

    Gao, Zan; Xiang, Ping

    2014-07-01

    Exergaming has been considered a fun solution to promoting a physically active lifestyle. This study examined the impact of an exergaming-based program on urban children's physical activity participation, body composition and perceptions of the program. A sample of 185 children's physical activity was measured in August 2009 (pretest), and percent body fat was used as index of body composition. Fourth graders were assigned to intervention group engaging in 30 minutes exergaming-based activities 3 times per week, while third and fifth graders were in comparison group. Measurements were repeated 9 months later (posttest). Interviews were conducted among 12 intervention children. ANCOVA with repeated measures revealed a significant main effect for intervention, F(1, 179) = 10.69, P < .01. Specifically, intervention children had significantly greater increased physical activity levels than comparison children. Logistic regression for body composition indicated intervention children did not differ significantly in percent body fat change from comparison children, Chi square = 5.42, P = .14. Children interviewed reported positive attitudes toward the intervention. The implementation of exergaming-based program could have a significantly positive effect on children's physical activity participation and attitudes. Meanwhile, long-term effect of the program on children's body composition deserves further investigation.

  13. Long-term changes in the benthic communities of the Pomeranian Bay (Southern Baltic Sea)

    NASA Astrophysics Data System (ADS)

    Kube, J.; Gosselck, F.; Powilleit, M.; Warzocha, J.

    1998-02-01

    Long-term changes in the macrofauna of the Pomeranian Bay were studied by comparing survey data from the 1950s, 1980s, and 1990s. The study area has undergone significant eutrophication during the period of investigation. Biomass of filter-feeding bivalves increased significantly. Spatial distribution patterns of several species have changed. Strong decreases in species richness were caused by oxygen depletion at stations deeper than 15 m. Saduria entomon, Monoporeia affinis, and Pontoporeia femorata vanished entirely between 1981 and 1993. Although a causal relationship between simultaneous increases of nutrient levels and macrobenthic biomass cannot be verified, eutrophication is proposed to be the major process affecing changes in macrofauna assemblages. In addition, changes in hydrography and climate increased frequency and severity of oxygen depletion events in the Pomeranian Bay since the mid 1980s.

  14. Geospatial datasets for watershed delineation and characterization used in the Hawaii StreamStats web application

    USGS Publications Warehouse

    Rea, Alan; Skinner, Kenneth D.

    2012-01-01

    The U.S. Geological Survey Hawaii StreamStats application uses an integrated suite of raster and vector geospatial datasets to delineate and characterize watersheds. The geospatial datasets used to delineate and characterize watersheds on the StreamStats website, and the methods used to develop the datasets are described in this report. The datasets for Hawaii were derived primarily from 10 meter resolution National Elevation Dataset (NED) elevation models, and the National Hydrography Dataset (NHD), using a set of procedures designed to enforce the drainage pattern from the NHD into the NED, resulting in an integrated suite of elevation-derived datasets. Additional sources of data used for computing basin characteristics include precipitation, land cover, soil permeability, and elevation-derivative datasets. The report also includes links for metadata and downloads of the geospatial datasets.

  15. Increased Classroom Consumption of Home-Provided Fruits and Vegetables for Normal and Overweight Children: Results of the Food Dudes Program in Italy.

    PubMed

    Presti, Giovambattista; Cau, Silvia; Oppo, Annalisa; Moderato, Paolo

    2015-01-01

    To increase classroom consumption of home-provided fruits (F) and vegetables (V) in obese, overweight, and normal weight children. Consumption evaluated within and across the baseline phase and the end of the intervention and maintenance phases. Three Italian primary schools. The study involved 672 children (321 male and 329 female) aged 5-11 years. Body mass index measures were available for 461 children. Intervention schools received the Food Dudes (FD) program: 16 days of repeated taste exposure (40 g of F and 40 g of V), video modeling, and rewards-based techniques. The comparison school was only repeatedly exposed to FV. Grams of FV brought from home and eaten. Chi-square, independent t test, repeated-measures ANOVA, and generalized estimating equation model. Intervention schools show a significant increase in home-provided F (P < .001) and V (P < .001) consumption both in overweight and non-overweight children. Approximately half of children in the intervention schools ate at least 1 portion of FV at the end of the intervention and maintenance phases. The increase in home-provided FV intake was similar in overweight and non-overweight children in the FD intervention schools compared with the comparison school. The effect of the FD program was higher at the end of the intervention phase than the end of the maintenance phase. Copyright © 2015 Society for Nutrition Education and Behavior. Published by Elsevier Inc. All rights reserved.

  16. A nationwide, population-based, long-term follow-up study of repeated self-harm in Taiwan

    PubMed Central

    2012-01-01

    Background Previous follow-up studies of repeated self-harm show that the cumulative risk of repeated self-harm within one year is 5.7%–15%, with females at greatest risk. However, relatively few studies have focused on the Far East. The objective of this study was to calculate the cumulative risk of repeated self-harm over different lengths of follow-up time (3 months, 6 months, and 1–8 years), to determine factors influencing repeated self-harm and to explore the interaction between gender and self-harm methods. Methods We used self-harm patient who hospitalized due to first-time self-harm between 2000 and 2007 from 1,230 hospitals in Taiwan. Hospitalization for repeated self-harm among members of this cohort was tracked after 3 months, 6 months, and 1–8 years. Tracking continued until December 31, 2008. We analyzed the cumulative risk and risk factors of repeated self-harm by using negative binomial regression. Results Of the 39,875 individual study samples, 3,388 individuals (8.50%) were found to have repeatedly self-harmed. The cumulative risk of repeated self-harm within three months was 7.19% and within one year was 8%. Within 8 years, it was 8.70%. Females were more likely to repeatedly self-harm than males (RR = 1.21, 95% CI = 1.15–1.76). The main method of self-harm was solid or liquid substances (RR = 1.88, 95% CI = 1.23–2.04) or cutting or piercing (RR = 1.36, 95% CI = 1.02–1.82), and in patients with psychiatric disorders were more likely to self-harm (RR = 1.61, 95% CI = 1.48–1.75). Conclusions The key time for intervention for repeated self-harm is within three months. Appropriate prevention programs should be developed based on gender differences. PMID:22950416

  17. Workplace Health Promotion and Mental Health: Three-Year Findings from Partnering Healthy@Work

    PubMed Central

    Martin, Angela; Venn, Alison; Otahal, Petr; Blizzard, Leigh; Teale, Brook; Sanderson, Kristy

    2016-01-01

    This study aimed to investigate the association between mental health and comprehensive workplace health promotion (WHP) delivered to an entire state public service workforce (~28,000 employees) over a three-year period. Government departments in a state public service were supported to design and deliver a comprehensive, multi-component health promotion program, Healthy@Work, which targeted modifiable health risks including unhealthy lifestyles and stress. Repeated cross-sectional surveys compared self-reported psychological distress (Kessler-10; K10) at commencement (N = 3406) and after 3 years (N = 3228). WHP availability and participation over time was assessed, and associations between the K10 and exposure to programs estimated. Analyses were repeated for a cohort subgroup (N = 580). Data were weighted for non-response. Participation in any mental health and lifestyle programs approximately doubled after 3 years. Both male and female employees with poorer mental health participated more often over time. Women’s psychological distress decreased over time but this change was only partially attributable to participation in WHP, and only to lifestyle interventions. Average psychological distress did not change over time for men. Unexpectedly, program components directly targeting mental health were not associated with distress for either men or women. Cohort results corroborated findings. Healthy@Work was successful in increasing participation across a range of program types, including for men and women with poorer mental health. A small positive association of participation in lifestyle programs with mental health was observed for women but not men. The lack of association of mental health programs may have reflected program quality, its universality of application or other contextual factors. PMID:27513577

  18. Workplace Health Promotion and Mental Health: Three-Year Findings from Partnering Healthy@Work.

    PubMed

    Jarman, Lisa; Martin, Angela; Venn, Alison; Otahal, Petr; Blizzard, Leigh; Teale, Brook; Sanderson, Kristy

    2016-01-01

    This study aimed to investigate the association between mental health and comprehensive workplace health promotion (WHP) delivered to an entire state public service workforce (~28,000 employees) over a three-year period. Government departments in a state public service were supported to design and deliver a comprehensive, multi-component health promotion program, Healthy@Work, which targeted modifiable health risks including unhealthy lifestyles and stress. Repeated cross-sectional surveys compared self-reported psychological distress (Kessler-10; K10) at commencement (N = 3406) and after 3 years (N = 3228). WHP availability and participation over time was assessed, and associations between the K10 and exposure to programs estimated. Analyses were repeated for a cohort subgroup (N = 580). Data were weighted for non-response. Participation in any mental health and lifestyle programs approximately doubled after 3 years. Both male and female employees with poorer mental health participated more often over time. Women's psychological distress decreased over time but this change was only partially attributable to participation in WHP, and only to lifestyle interventions. Average psychological distress did not change over time for men. Unexpectedly, program components directly targeting mental health were not associated with distress for either men or women. Cohort results corroborated findings. Healthy@Work was successful in increasing participation across a range of program types, including for men and women with poorer mental health. A small positive association of participation in lifestyle programs with mental health was observed for women but not men. The lack of association of mental health programs may have reflected program quality, its universality of application or other contextual factors.

  19. Needs-based health promotion program serves as HMO marketing tool.

    PubMed Central

    Donaldson, M S; Nicklason, J A; Ott, J E

    1985-01-01

    A needs assessment survey was originally conducted at the George Washington University Health Plan in 1981 and repeated in 1983 for evaluation and redirection. The survey resulted in a program which attempted to address the perceived needs of its members. The response, not only of the patients, but also of both the HMO clinical and marketing staffs, resulted in further program development, and established role for health promotion in HMO marketing, and a model of preventive care teaching in ambulatory primary care medicine. PMID:3923532

  20. Assessing the Effectiveness of a School-Based Dental Clinic on the Oral Health of Children Who Lack Access to Dental Care: A Program Evaluation

    ERIC Educational Resources Information Center

    Carpino, Rachel; Walker, Mary P.; Liu, Ying; Simmer-Beck, Melanie

    2017-01-01

    This program evaluation examines the effectiveness of a school-based dental clinic. A repeated-measures design was used to longitudinally examine secondary data from participants (N = 293). Encounter intensity was developed to normalize data. Multivariate analysis of variance and Kruskal-Wallis test were used to investigate the effect of encounter…

  1. Pilot program (proof of concept) to mitigate Phytophthora ramorum at an infested nursery based on a systems approach

    Treesearch

    Gary Chastagner; Marianne Elliott

    2017-01-01

    The primary purpose of this program was to demonstrate proof of concept of certain mitigation approaches at a repeat P. ramorum-positive nursery site in Washington. Approaches included steam treatment of infested soil areas; creating a gravel “sandwich” above steam-treated and potentially infested soil surfaces; improving drainage systems; required...

  2. [Implementation of the program of "Collaborative Development of Advanced Practical Education to Train Pharmacists in Leadership" under the joint operation of the pharmaceutical departments in fourteen national universities].

    PubMed

    Hirata, Kazumasa; Tamura, Satoru; Kobayashi, Motomasa

    2012-01-01

    "Collaborative Development of Advanced Practical Education Program to Train Pharmacists with Leadership" applied jointly by the pharmaceutical departments of fourteen national universities was selected to receive the special expenditure support of Ministry of Education, Culture, Sports, Science and Technology for fiscal year 2010 under "the Training of Highly Skillful Professionals and Improvement of the Quality of the Function of Professional Education". This project is to promote the collaborative development of the educational program which will make it possible to further advance and substantiate the education of pharmacists in the six year course of the pharmaceutical department for the ultimate purpose to introduce pharmacists with leadership who can play an active role and fill in a leadership position in a wide range of responsibilities into the society which, more and more, has come to expect pharmacy to take the initiative in acting against health hazards caused by infections, foods and environmental pollution as well as to meet the diversification of healthcare. To be more specific, this project is to try and evaluate the following programs repeatedly based on the plan-do-check-act (PDCA) cycle: 1) Practical medical and pharmaceutical education program; 2) Program concerning research on long term themes and advanced education; 3) Program concerning training and education of SPs (standardized patients or simulated patients) and PBL (problem-based learning) tutorial education; and 4) Program concerning the method of evaluation of education. Through this repeated trial and evaluation, this project ultimately seeks to construct a highly effective practical educational program which integrates each university's achievements and educational attempts rich in originality.

  3. Repeated testing improves achievement in a blended learning approach for risk competence training of medical students: results of a randomized controlled trial.

    PubMed

    Spreckelsen, C; Juenger, J

    2017-09-26

    Adequate estimation and communication of risks is a critical competence of physicians. Due to an evident lack of these competences, effective training addressing risk competence during medical education is needed. Test-enhanced learning has been shown to produce marked effects on achievements. This study aimed to investigate the effect of repeated tests implemented on top of a blended learning program for risk competence. We introduced a blended-learning curriculum for risk estimation and risk communication based on a set of operationalized learning objectives, which was integrated into a mandatory course "Evidence-based Medicine" for third-year students. A randomized controlled trial addressed the effect of repeated testing on achievement as measured by the students' pre- and post-training score (nine multiple-choice items). Basic numeracy and statistical literacy were assessed at baseline. Analysis relied on descriptive statistics (histograms, box plots, scatter plots, and summary of descriptive measures), bootstrapped confidence intervals, analysis of covariance (ANCOVA), and effect sizes (Cohen's d, r) based on adjusted means and standard deviations. All of the 114 students enrolled in the course consented to take part in the study and were assigned to either the intervention or control group (both: n = 57) by balanced randomization. Five participants dropped out due to non-compliance (control: 4, intervention: 1). Both groups profited considerably from the program in general (Cohen's d for overall pre vs. post scores: 2.61). Repeated testing yielded an additional positive effect: while the covariate (baseline score) exhibits no relation to the post-intervention score, F(1, 106) = 2.88, p > .05, there was a significant effect of the intervention (repeated tests scenario) on learning achievement, F(1106) = 12.72, p < .05, d = .94, r = .42 (95% CI: [.26, .57]). However, in the subgroup of participants with a high initial numeracy score no similar effect could be observed. Dedicated training can improve relevant components of risk competence of medical students. An already promising overall effect of the blended learning approach can be improved significantly by implementing a test-enhanced learning design, namely repeated testing. As students with a high initial numeracy score did not profit equally from repeated testing, target-group specific opt-out may be offered.

  4. Theory-driven intervention improves calcium intake, osteoporosis knowledge, and self-efficacy in community-dwelling older Black adults.

    PubMed

    Babatunde, Oyinlola T; Himburg, Susan P; Newman, Frederick L; Campa, Adriana; Dixon, Zisca

    2011-01-01

    To assess the effectiveness of an osteoporosis education program to improve calcium intake, knowledge, and self-efficacy in community-dwelling older Black adults. Randomized repeated measures experimental design. Churches and community-based organizations. Men and women (n = 110) 50 years old and older from 3 south Florida counties. Participants randomly assigned to either of 2 groups: Group 1 (experimental group) or Group 2 (wait-list control group). Group 1 participated in 6 weekly education program sessions immediately following baseline assessment, and Group 2 started the program following Group 1's program completion. A tested curriculum was adapted to meet the needs of the target population. Dietary calcium intake, osteoporosis knowledge, health beliefs, and self-efficacy. Descriptive and summary statistics, repeated measures analysis of variance, and regression analysis. Of the total participants, 84.6% completed the study (mean age = 70.2 years). Overall, an educational program developed with a theoretical background was associated with improvement in calcium intake, knowledge, and self-efficacy, with no effect on most health belief subscales. Assigned group was the major predictor of change in calcium intake. A theory-driven approach is valuable in improving behavior to promote bone health in this population. Health professionals should consider using more theory-driven approaches in intervention studies. Copyright © 2011 Society for Nutrition Education and Behavior. Published by Elsevier Inc. All rights reserved.

  5. Views of South African Chemistry Students in University Bridging Programs on the Reliability of Experimental Data

    NASA Astrophysics Data System (ADS)

    Rollnick, Marissa; Dlamini, Betty; Lotz, Sandra; Lubben, Fred

    2001-08-01

    This paper reports an investigation of the status of procedural knowledge in chemistry amongst students entering into bridging programs at two South African universities. The students answered a questionnaire which investigated their perceived reasons for repeating readings and their ideas about handling data. Students also answered a question on laboratory apparatus which was used to assess their laboratory experience. The overall responses were analysed, as well as their relationship to laboratory experience and home language. The findings show that students overall tend to repeat in order to get a recurring reading. Very few students were able to use a line of best fit for a set of graphical data. There is some relationship between their responses and previous laboratory experiences, but little fundamental difference between the responses of the two main language groups. Some implications for tertiary education in chemistry are discussed.

  6. Effects of an In-season Plyometric Training Program on Repeated Change of Direction and Sprint Performance in the Junior Soccer Player.

    PubMed

    Hammami, Mehréz; Negra, Yassine; Aouadi, Ridha; Shephard, Roy J; Chelly, Mohamed Souhaiel

    2016-12-01

    Hammami, M, Negra, Y, Aouadi, R, Shephard, RJ, and Chelly, MS. Effects of an in-season plyometric training program on repeated change of direction and sprint performance in the junior soccer player. J Strength Cond Res 30(12): 3312-3320, 2016-We aimed to determine the gains in explosive movements of male junior soccer players induced by incorporating an 8-week plyometric training program (PTP) into a standard soccer conditioning regimen 5 months after the beginning of the competitive season. Our hypothesis was that PTP would enhance explosive movements, and thus sprint running, repeated shuttle sprint ability (RSSA), agility and the ability to make repeated changes of direction (RCOD). A group of junior soccer players were randomly divided into 2 groups: an experimental group (E, n = 15, age 15.7 ± 0.2 years) and a control group (C, n = 13, age 15.8 ± 0.2 years). The participants in E and C performed training exercises and matches together, but for an 8-week period in the latter part of the season, the experimental group replaced a part of the normal regimen (the tactical session) by a biweekly course of PTP (hurdle and drop jumps). Two familiarization sessions were held 2 weeks before definitive testing. The ability of the players was assessed by 3 agility tests (a sprint test with 180° turns, a 9-3-6-3-9 m sprint with backward and forward running, and a four 5-m sprint test with turns); 2 repeated sprint tests (RSSA and RCOD); and running times over 5-, 10-, 20-, 30-, and 40-m distances. Participants in E showed gains relative to C in sprint times (p ≤ 0.05 for 5, 10, and 20 m), and 2 of 3 the RCOD parameters (RCOD best, p ≤ 0.001; RCOD total, p ≤ 0.05). However, with the pattern of plyometric training that we adopted, and perhaps because participants were in good initial physical condition, the agility and RSSA test scores remained unchanged. Nevertheless, we conclude that our PTP can be commended to junior soccer players as a means of improving important components of their physical performance.

  7. The Indiana Chronic Disease Management Program's impact on medicaid claims: a longitudinal, statewide evaluation.

    PubMed

    Katz, Barry P; Holmes, Ann M; Stump, Timothy E; Downs, Steven M; Zillich, Alan J; Ackermann, Ronald T; Inui, Thomas S

    2009-02-01

    : Disease management programs have grown in popularity over the past decade as a strategy to curb escalating healthcare costs for persons with chronic diseases. : To evaluate the effect of the Indiana Chronic Disease Management Program (ICDMP) on the longitudinal changes in Medicaid claims statewide. : Phased implementation of a chronic disease management program in 3 regions of the state. Fourteen repeated cohorts of Medicaid members were drawn over a period of 3.5 years and the trends in claims were evaluated using a repeated measures model. : A total of 44,218 Medicaid members with diabetes and/or congestive heart failure in 3 geographic regions in Indiana. : Across all 3 regions and both disease classes, we found a flattening of cost trends between the pre- and post-ICDMP-initiation periods. This change in the slopes was significant for all of the models except for congestive heart failure in southern Indiana. Thus, the average per member claims paid was increasing at a faster rate before ICDMP but slowed once the program was initiated. To distinguish shorter and longer-term effects related to ICDMP, we estimated annual slopes within the pre- and post-ICDMP- time periods. A similar pattern was found in all regions: claims were increasing before ICDMP, flattened in the years around program initiation, and remained flat in the final year of follow-up. : This analysis shows that the trend in average total claims changed significantly after the implementation of ICDMP, with a decline in the rate of increase in claims paid observed for targeted Medicaid program populations across the state of Indiana.

  8. Repeated Sprint Ability in Young Basketball Players (Part 2): The Chronic Effects of Multidirection and of One Change of Direction Are Comparable in Terms of Physiological and Performance Responses

    PubMed Central

    Attene, Giuseppe; Nikolaidis, Pantelis T.; Bragazzi, Nicola L.; Dello Iacono, Antonio; Pizzolato, Fabio; Zagatto, Alessandro M.; Dal Pupo, Juliano; Oggianu, Marcello; Migliaccio, Gian M.; Mannucci Pacini, Elena; Padulo, Johnny

    2016-01-01

    The aim of this study was to examine the effects of a 5-week training program, consisting of repeated 30-m sprints, on two repeated sprint ability (RSA) test formats: one with one change of direction (RSA) and the other with multiple changes of direction (RSM). Thirty-six young male and female basketball players (age 16.1 ± 0.9 years), divided into two experimental groups, were tested for RSA, RSM, squat jump, counter-movement jump, and the Yo-Yo Intermittent Recovery-Level-1 (Yo-Yo IR1) test, before and after a 4-week training program and 1 week of tapering. One group performed 30-m sprints with one change of direction (RSA group, RSAG), whereas the other group performed multidirectional 30-m sprints (RSM group, RSMG). Both groups improved in all scores in the post-intervention measurements (P < 0.05), except for the fatigue index in the RSM test. However, when comparing the two groups, similar effects were found for almost all parameters of the tests applied, except for RPE in the RSA test, which had a greater decrease in the RSAG (from 8.7 to 5.9) than in the RSMG (from 8.5 to 6.6, P = 0.021). We can conclude that repeated 30-m sprints, either with one change of direction or multidirectional, induce similar physiological and performance responses in young basketball players, but have a different psycho-physiological impact. PMID:27445852

  9. [Correlation of codon biases and potential secondary structures with mRNA translation efficiency in unicellular organisms].

    PubMed

    Vladimirov, N V; Likhoshvaĭ, V A; Matushkin, Iu G

    2007-01-01

    Gene expression is known to correlate with degree of codon bias in many unicellular organisms. However, such correlation is absent in some organisms. Recently we demonstrated that inverted complementary repeats within coding DNA sequence must be considered for proper estimation of translation efficiency, since they may form secondary structures that obstruct ribosome movement. We have developed a program for estimation of potential coding DNA sequence expression in defined unicellular organism using its genome sequence. The program computes elongation efficiency index. Computation is based on estimation of coding DNA sequence elongation efficiency, taking into account three key factors: codon bias, average number of inverted complementary repeats, and free energy of potential stem-loop structures formed by the repeats. The influence of these factors on translation is numerically estimated. An optimal proportion of these factors is computed for each organism individually. Quantitative translational characteristics of 384 unicellular organisms (351 bacteria, 28 archaea, 5 eukaryota) have been computed using their annotated genomes from NCBI GenBank. Five potential evolutionary strategies of translational optimization have been determined among studied organisms. A considerable difference of preferred translational strategies between Bacteria and Archaea has been revealed. Significant correlations between elongation efficiency index and gene expression levels have been shown for two organisms (S. cerevisiae and H. pylori) using available microarray data. The proposed method allows to estimate numerically the coding DNA sequence translation efficiency and to optimize nucleotide composition of heterologous genes in unicellular organisms. http://www.mgs.bionet.nsc.ru/mgs/programs/eei-calculator/.

  10. Hollow cathode heater development for the Space Station plasma contactor

    NASA Technical Reports Server (NTRS)

    Soulas, George C.

    1993-01-01

    A hollow cathode-based plasma contactor has been selected for use on the Space Station. During the operation of the plasma contactor, the hollow cathode heater will endure approximately 12000 thermal cycles. Since a hollow cathode heater failure would result in a plasma contactor failure, a hollow cathode heater development program was established to produce a reliable heater design. The development program includes the heater design, process documents for both heater fabrication and assembly, and heater testing. The heater design was a modification of a sheathed ion thruster cathode heater. Three heaters have been tested to date using direct current power supplies. Performance testing was conducted to determine input current and power requirements for achieving activation and ignition temperatures, single unit operational repeatability, and unit-to-unit operational repeatability. Comparisons of performance testing data at the ignition input current level for the three heaters show the unit-to-unit repeatability of input power and tube temperature near the cathode tip to be within 3.5 W and 44 degrees C, respectively. Cyclic testing was then conducted to evaluate reliability under thermal cycling. The first heater, although damaged during assembly, completed 5985 ignition cycles before failing. Two additional heaters were subsequently fabricated and have completed 3178 cycles to date in an on-going test.

  11. Improvement of Repeated-Sprint Ability and Horizontal-Jumping Performance in Elite Young Basketball Players With Low-Volume Repeated-Maximal-Power Training.

    PubMed

    Gonzalo-Skok, Oliver; Tous-Fajardo, Julio; Arjol-Serrano, José Luis; Suarez-Arrones, Luis; Casajús, José Antonio; Mendez-Villanueva, Alberto

    2016-05-01

    To examine the effects of a low-volume repeated-power-ability (RPA) training program on repeated-sprint and change-of- direction (COD) ability and functional jumping performance. Twenty-two male elite young basketball players (age 16.2 ± 1.2 y, height 190.0 ± 10.0 cm, body mass 82.9 ± 10.1 kg) were randomly assigned either to an RPA-training group (n = 11) or a control group (n = 11). RPA training consisted of leg-press exercise, twice a week for 6 wk, of 1 or 2 blocks of 5 sets × 5 repetitions with 20 s of passive recovery between sets and 3 min between blocks with the load that maximized power output. Before and after training, performance was assessed by a repeated-sprint-ability (RSA) test, a repeated-COD-ability test, a hop for distance, and a drop jump followed by tests of a double unilateral hop with the right and left legs. Within-group and between-groups differences showed substantial improvements in slowest (RSAs) and mean time (RSAm) on RSA; best, slowest and mean time on repeated-COD ability; and unilateral right and left hop in the RPA group in comparison with control. While best time on RSA showed no improvement in any group, there was a large relationship (r = .68, 90% CI .43;.84) between the relative decrement in RSAm and RSAs, suggesting better sprint maintenance with RPA training. The relative improvements in best and mean repeated-COD ability were very largely correlated (r = .89, 90% CI .77;.94). Six weeks of lowvolume (4-14 min/wk) RPA training improved several physical-fitness tests in basketball players.

  12. Adélie penguin foraging location predicted by tidal regime switching.

    PubMed

    Oliver, Matthew J; Irwin, Andrew; Moline, Mark A; Fraser, William; Patterson, Donna; Schofield, Oscar; Kohut, Josh

    2013-01-01

    Penguin foraging and breeding success depend on broad-scale environmental and local-scale hydrographic features of their habitat. We investigated the effect of local tidal currents on a population of Adélie penguins on Humble Is., Antarctica. We used satellite-tagged penguins, an autonomous underwater vehicle, and historical tidal records to model of penguin foraging locations over ten seasons. The bearing of tidal currents did not oscillate daily, but rather between diurnal and semidiurnal tidal regimes. Adélie penguins foraging locations changed in response to tidal regime switching, and not to daily tidal patterns. The hydrography and foraging patterns of Adélie penguins during these switching tidal regimes suggest that they are responding to changing prey availability, as they are concentrated and dispersed in nearby Palmer Deep by variable tidal forcing on weekly timescales, providing a link between local currents and the ecology of this predator.

  13. Adélie Penguin Foraging Location Predicted by Tidal Regime Switching

    PubMed Central

    Oliver, Matthew J.; Irwin, Andrew; Moline, Mark A.; Fraser, William; Patterson, Donna; Schofield, Oscar; Kohut, Josh

    2013-01-01

    Penguin foraging and breeding success depend on broad-scale environmental and local-scale hydrographic features of their habitat. We investigated the effect of local tidal currents on a population of Adélie penguins on Humble Is., Antarctica. We used satellite-tagged penguins, an autonomous underwater vehicle, and historical tidal records to model of penguin foraging locations over ten seasons. The bearing of tidal currents did not oscillate daily, but rather between diurnal and semidiurnal tidal regimes. Adélie penguins foraging locations changed in response to tidal regime switching, and not to daily tidal patterns. The hydrography and foraging patterns of Adélie penguins during these switching tidal regimes suggest that they are responding to changing prey availability, as they are concentrated and dispersed in nearby Palmer Deep by variable tidal forcing on weekly timescales, providing a link between local currents and the ecology of this predator. PMID:23383091

  14. The National Map - Orthoimagery Layer

    USGS Publications Warehouse

    ,

    2007-01-01

    Many Federal, State, and local agencies use a common set of framework geographic information databases as a tool for economic and community development, land and natural resource management, and health and safety services. Emergency management and homeland security applications rely on this information. Private industry, nongovernmental organizations, and individual citizens use the same geographic data. Geographic information underpins an increasingly large part of the Nation's economy. The U.S. Geological Survey (USGS) is developing The National Map to be a seamless, continually maintained, and nationally consistent set of online, public domain, framework geographic information databases. The National Map will serve as a foundation for integrating, sharing, and using data easily and consistently. The data will be the source of revised paper topographic maps. The National Map includes digital orthorectified imagery; elevation data; vector data for hydrography, transportation, boundary, and structure features; geographic names; and land cover information.

  15. An assessment of ten ocean reanalyses in the polar regions

    NASA Astrophysics Data System (ADS)

    Uotila, Petteri; Goosse, Hugues; Haines, Keith; Chevallier, Matthieu; Barthélemy, Antoine; Bricaud, Clément; Carton, Jim; Fučkar, Neven; Garric, Gilles; Iovino, Doroteaciro; Kauker, Frank; Korhonen, Meri; Lien, Vidar S.; Marnela, Marika; Massonnet, François; Mignac, Davi; Peterson, K. Andrew; Sadikni, Remon; Shi, Li; Tietsche, Steffen; Toyoda, Takahiro; Xie, Jiping; Zhang, Zhaoru

    2018-05-01

    Global and regional ocean and sea ice reanalysis products (ORAs) are increasingly used in polar research, but their quality remains to be systematically assessed. To address this, the Polar ORA Intercomparison Project (Polar ORA-IP) has been established following on from the ORA-IP project. Several aspects of ten selected ORAs in the Arctic and Antarctic were addressed by concentrating on comparing their mean states in terms of snow, sea ice, ocean transports and hydrography. Most polar diagnostics were carried out for the first time in such an extensive set of ORAs. For the multi-ORA mean state, we found that deviations from observations were typically smaller than individual ORA anomalies, often attributed to offsetting biases of individual ORAs. The ORA ensemble mean therefore appears to be a useful product and while knowing its main deficiencies and recognising its restrictions, it can be used to gain useful information on the physical state of the polar marine environment.

  16. Modeling and Analysis of Integrated Bathymetric and Geodetic Data for Inventory Surveys of Mining Water Reservoirs

    NASA Astrophysics Data System (ADS)

    Ochałek, Agnieszka; Lipecki, Tomasz; Jaśkowski, Wojciech; Jabłoński, Mateusz

    2018-03-01

    The significant part of the hydrography is bathymetry, which is the empirical part of it. Bathymetry is the study of underwater depth of waterways and reservoirs, and graphic presentation of measured data in form of bathymetric maps, cross-sections and three-dimensional bottom models. The bathymetric measurements are based on using Global Positioning System and devices for hydrographic measurements - an echo sounder and a side sonar scanner. In this research authors focused on introducing the case of obtaining and processing the bathymetrical data, building numerical bottom models of two post-mining reclaimed water reservoirs: Dwudniaki Lake in Wierzchosławice and flooded quarry in Zabierzów. The report includes also analysing data from still operating mining water reservoirs located in Poland to depict how bathymetry can be used in mining industry. The significant issue is an integration of bathymetrical data and geodetic data from tachymetry, terrestrial laser scanning measurements.

  17. The role of digital cartographic data in the geosciences

    USGS Publications Warehouse

    Guptill, S.C.

    1983-01-01

    The increasing demand of the Nation's natural resource developers for the manipulation, analysis, and display of large quantities of earth-science data has necessitated the use of computers and the building of geoscience information systems. These systems require, in digital form, the spatial data on map products. The basic cartographic data shown on quadrangle maps provide a foundation for the addition of geological and geophysical data. If geoscience information systems are to realize their full potential, large amounts of digital cartographic base data must be available. A major goal of the U.S. Geological Survey is to create, maintain, manage, and distribute a national cartographic and geographic digital database. This unified database will contain numerous categories (hydrography, hypsography, land use, etc.) that, through the use of standardized data-element definitions and formats, can be used easily and flexibly to prepare cartographic products and perform geoscience analysis. ?? 1983.

  18. Adapting generalization tools to physiographic diversity for the united states national hydrography dataset

    USGS Publications Warehouse

    Buttenfield, B.P.; Stanislawski, L.V.; Brewer, C.A.

    2011-01-01

    This paper reports on generalization and data modeling to create reduced scale versions of the National Hydrographic Dataset (NHD) for dissemination through The National Map, the primary data delivery portal for USGS. Our approach distinguishes local differences in physiographic factors, to demonstrate that knowledge about varying terrain (mountainous, hilly or flat) and varying climate (dry or humid) can support decisions about algorithms, parameters, and processing sequences to create generalized, smaller scale data versions which preserve distinct hydrographic patterns in these regions. We work with multiple subbasins of the NHD that provide a range of terrain and climate characteristics. Specifically tailored generalization sequences are used to create simplified versions of the high resolution data, which was compiled for 1:24,000 scale mapping. Results are evaluated cartographically and metrically against a medium resolution benchmark version compiled for 1:100,000, developing coefficients of linear and areal correspondence.

  19. Conflation and integration of archived geologic maps and associated uncertainties

    USGS Publications Warehouse

    Shoberg, Thomas G.

    2016-01-01

    Old, archived geologic maps are often available with little or no associated metadata. This creates special problems in terms of extracting their data to use with a modern database. This research focuses on some problems and uncertainties associated with conflating older geologic maps in regions where modern geologic maps are, as yet, non-existent as well as vertically integrating the conflated maps with layers of modern GIS data (in this case, The National Map of the U.S. Geological Survey). Ste. Genevieve County, Missouri was chosen as the test area. It is covered by six archived geologic maps constructed in the years between 1928 and 1994. Conflating these maps results in a map that is internally consistent with these six maps, is digitally integrated with hydrography, elevation and orthoimagery data, and has a 95% confidence interval useful for further data set integration.

  20. Mobile MAX-DOAS and in situ measurements of NO2 and SO2

    NASA Astrophysics Data System (ADS)

    Wittrock, Folkard; Peters, Enno; Seyler, André; Mathieu-Üffing, Barbara; Kattner, Lisa; Richter, Andreas; Burrows, John P.

    2017-04-01

    The project MeSMarT (Measurements of shipping emissions in the marine troposphere) has been established as a cooperation between the University of Bremen and the German Bundesamt für Seeschifffahrt und Hydrographie (Federal Maritime and Hydrographic Agency) to estimate the influence of shipping emissions on the chemistry of the atmospheric boundary layer and to establish a monitoring system for main shipping routes. As part of the project in 2015 a mobile lab has been set up, which includes among other instrumentation for air pollution and meteorological parameters a scientific-grade MAX-DOAS system as well as in situ instruments for nitrogen oxides and sulfur dioxide (trace level). Focusing on NO2 and SO2 we present intercomparison results between the different instruments onboard the mobile lab as well as comparisons to standard instrumentation used at different sites in Northern Germany within the project.

  1. Zooplankton Structure of the La Paz Bay southern Gulf of California and their Relation with the Hydrography during the summer 2004

    NASA Astrophysics Data System (ADS)

    Mojica-Ramirez, E.; Monreal-Gomez, M. A.; Salas-de-Leon, D. A.

    2007-05-01

    Physical and biological data were gathered in Bay of La Paz, Southern Gulf of California, in summer, 2004. These include hydrographical data, ADP currents, backscattering signals, in vivo natural fluorescence, as well as, zooplankton samples. The topography of the 15°C shows a dome in the central part of the bay that becomes deeper towards the periphery suggesting the existence of a cyclonic eddy. The 35 salinity topography shows an uplift of 35 m. The eddy has a north-south diameter of approximately 35 km and cover almost all the bay. The zooplankton samples reveal the existence of 23 groups the most abundant were cladocera, copepods, siphonophores, chaetognaths and larvae of crustaceans. The zooplankton biomass presents higher values in the periphery of the eddy indicating an influence of the cyclonic circulation in their distribution.

  2. National hydrography dataset--linear referencing

    USGS Publications Warehouse

    Simley, Jeffrey; Doumbouya, Ariel

    2012-01-01

    Geospatial data normally have a certain set of standard attributes, such as an identification number, the type of feature, and name of the feature. These standard attributes are typically embedded into the default attribute table, which is directly linked to the geospatial features. However, it is impractical to embed too much information because it can create a complex, inflexible, and hard to maintain geospatial dataset. Many scientists prefer to create a modular, or relational, data design where the information about the features is stored and maintained separately, then linked to the geospatial data. For example, information about the water chemistry of a lake can be maintained in a separate file and linked to the lake. A Geographic Information System (GIS) can then relate the water chemistry to the lake and analyze it as one piece of information. For example, the GIS can select all lakes more than 50 acres, with turbidity greater than 1.5 milligrams per liter.

  3. [Ichthyoplankton from the pier area in Limón, Costa Rica].

    PubMed

    Dominici-Arosemena, A; Brugnoli-Olivera, E; Solano-Ulate, S; Molina-Ureña, H; Ramírez Coghi, A R

    2000-01-01

    Four sampling stations were set 200-500 m off Limon Port, Costa Rica, at an average depth of 20 m. From October 1996 to May 1997 horizontal subsuperficial trawls were done for 12 minutes at a speed of about 2 Km/h, with a 1,000 microns plancton net. A total of 28 samples were processed and 104 physical-chemistry parameter measurements were taken. Average salinity was 30.1 +/- 3.7 and dissolved oxygen 6.9 +/- 0.6 mg l-1 reflecting good aeration throughout the sampling period. This suggests good mixture and a highly dynamic hydrography. Temperature showed no drastic variations (28.0 +/- 1.7 degrees C), possibly because of the constant mixing with shallow water. The highest larval counts were for November and early January and include families common to reefs and estuaries (Balistidae, Lutjanidae) and to coastal areas (Centropomidae, Gerreidae, Haemulidae, Carangidae, Engraulidae, Hemiramphidae, and representative Pleuronectiformes) existing in a common area.

  4. Ecosystem responses to biogeochemical fronts in the South Brazil Bight

    NASA Astrophysics Data System (ADS)

    Brandini, Frederico P.; Tura, Pedro M.; Santos, Pedro P. G. M.

    2018-05-01

    Here we described the general hydrography in the South Brazil Bight (23-28°S) with emphasis on frontal processes and their role in the structure and functioning of the regional shelf ecosystem. One of the key roles of fronts for ecosystem dynamics is the injection of nutrients into the euphotic zone increasing primary production. Frontal systems also affect plankton biodiversity and fisheries. Physical mechanisms behind frontogenesis in this region are similar in the analogous western side of oceanic basins; their magnitude and seasonal dynamics, however, may differ due to peculiarities in shelf morphology, wind field, tidal circulation and continental drainage. Here we provide a reassessment of earlier and recent ecological and hydrographic studies for a better evaluation of the spatial and temporal dynamics of fronts and their regional ecological implications. Albeit in a fragmented manner, we give a more detailed conceptual framework about the ecosystem responses to the complex frontal system in the South Brazil Bight.

  5. Linking seafloor volcanism to rising carbon dioxide after the last ice age: observations from the Gulf of California

    NASA Astrophysics Data System (ADS)

    Rafter, P. A.; Herguera, J. C.; Carriquiry, J. D.; Solomon, E. A.; Southon, J. R.

    2017-12-01

    Seafloor volcanism at ocean spreading centers may have played an important role in late Pleistocene glacial terminations by increasing the global inventory of the greenhouse gas carbon dioxide (CO2). Gulf of California geology and hydrography offer a unique opportunity to quantify this carbon contribution because CO2 from local seafloor volcanism will reduce/reverse the vertical gradient of seawater radiocarbon (14C). We reconstructed this surface-to-deep gradient by measuring the 14C content of seafloor- and surface-dwelling foraminifera and find several surface-deep 14C reversals during the most recent deglaciation—a 14C distribution that has no analog in the modern ocean. We interpret these observations as representing increased CO2 efflux from the seafloor during deglaciation, linking plate tectonics with the carbon cycle and global climate via enhanced seafloor volcanism.

  6. Creation of digital contours that approach the characteristics of cartographic contours

    USGS Publications Warehouse

    Tyler, Dean J.; Greenlee, Susan K.

    2012-01-01

    The capability to easily create digital contours using commercial off-the-shelf (COTS) software has existed for decades. Out-of-the-box raw contours are suitable for many scientific applications without pre- or post-processing; however, cartographic applications typically require additional improvements. For example, raw contours generally require smoothing before placement on a map. Cartographic contours must also conform to certain spatial/logical rules; for example, contours may not cross waterbodies. The objective was to create contours that match as closely as possible the cartographic contours produced by manual methods on the 1:24,000-scale, 7.5-minute Topographic Map series. This report outlines the basic approach, describes a variety of problems that were encountered, and discusses solutions. Many of the challenges described herein were the result of imperfect input raster elevation data and the requirement to have the contours integrated with hydrographic features from the National Hydrography Dataset (NHD).

  7. High school students in a health career promotion program report fewer acts of aggression and violence.

    PubMed

    Oscós-Sánchez, Manuel Ángel; Lesser, Janna; Oscós-Flores, L Dolores

    2013-01-01

    This study examined the effects of two school-based programs on the perpetration of nonphysical aggression, physical violence, and intimate partner violence among high-risk secondary school students in an economically disadvantaged and predominantly Latino school district. The intervention program was El Joven Noble, and the control program was the Teen Medical Academy. The study used a repeated-measures quasi-experimental intervention/control design. The participants self-reported the previous 30 days' acts of nonphysical aggression, physical violence, and intimate partner violence at baseline and at 3 and 9 months after enrollment. Program- and grade-level effects at 3 and 9 months were examined using three-factor analyses of covariance models with one factor for repeated measures. The covariate in each of the models was the baseline measure of the dependent outcomes. No significant baseline differences were found between the participants in the intervention (n = 96) and control (n = 127) programs. At 9 months after enrollment in the study, high school students who participated in the Teen Medical Academy reported fewer acts of nonphysical aggression (p < .001) and physical violence (p = .002) than high school students who participated in El Joven Noble. Students who participated in the Teen Medical Academy also reported fewer acts of intimate partner violence (p = .02) than students who participated in El Joven Noble. High school students who participated in a health career promotion program reported fewer acts of aggression and violence as compared with high school students who participated in a culturally tailored character development program. Copyright © 2013 Society for Adolescent Health and Medicine. Published by Elsevier Inc. All rights reserved.

  8. 40 CFR 158.2230 - Toxicology.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... pesticide is likely to result in repeated human exposure over a considerable portion of the human lifespan... exposures and adverse neurological effects in human epidemiological studies. iv. The pesticide evokes a... Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) PESTICIDE PROGRAMS DATA REQUIREMENTS...

  9. Survey of DWI courts : traffic tech.

    DOT National Transportation Integrated Search

    2016-06-01

    DWI Courts are a relatively new approach to combatting : alcohol-impaired driving that borrows from the Drug Court : Model and is directed at repeat DWI offenders and offenders : having high BACs at time of arrest. These court programs : attack the s...

  10. Design of a blood-freezing system for leukemia research

    NASA Technical Reports Server (NTRS)

    Williams, T. E.; Cygnarowicz, T. A.

    1978-01-01

    Leukemia research involves the use of cryogenic freezing and storage equipment. In a program being carried out at the National Cancer Institute (NCI), bone marrow (white blood cells) was frozen using a standard cryogenic biological freezer. With this system, it is difficult to maintain the desired rate of freezing and repeatability from sample to sample. A freezing system was developed that satisfies the requirements for a repeatable, constant freezing rate. The system was delivered to NIC and is now operational. This report describes the design of the major subsystems, the analyses, the operating procedure, and final system test results.

  11. Sustaining and Improving Study Abroad Experiences Through Comparative Evaluation.

    PubMed

    Johanson, Linda S

    Researchers have related participation in study abroad experiences to many positive outcomes for nursing students; however, educators are faced with the task of not only developing meaningful study abroad opportunities but sustaining and improving them as well. Educators can evaluate repeat study abroad programs by comparing experiences, looking for trends, and conjecturing rationales. To illustrate this process, an example of a study abroad opportunity that has been repeated over 11 years is presented. The first six years have been compared to the most recent five years, revealing three categories of change for evaluation and the resulting course improvements.

  12. CRISPR recognition tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats.

    PubMed

    Bland, Charles; Ramsey, Teresa L; Sabree, Fareedah; Lowe, Micheal; Brown, Kyndall; Kyrpides, Nikos C; Hugenholtz, Philip

    2007-06-18

    Clustered Regularly Interspaced Palindromic Repeats (CRISPRs) are a novel type of direct repeat found in a wide range of bacteria and archaea. CRISPRs are beginning to attract attention because of their proposed mechanism; that is, defending their hosts against invading extrachromosomal elements such as viruses. Existing repeat detection tools do a poor job of identifying CRISPRs due to the presence of unique spacer sequences separating the repeats. In this study, a new tool, CRT, is introduced that rapidly and accurately identifies CRISPRs in large DNA strings, such as genomes and metagenomes. CRT was compared to CRISPR detection tools, Patscan and Pilercr. In terms of correctness, CRT was shown to be very reliable, demonstrating significant improvements over Patscan for measures precision, recall and quality. When compared to Pilercr, CRT showed improved performance for recall and quality. In terms of speed, CRT proved to be a huge improvement over Patscan. Both CRT and Pilercr were comparable in speed, however CRT was faster for genomes containing large numbers of repeats. In this paper a new tool was introduced for the automatic detection of CRISPR elements. This tool, CRT, showed some important improvements over current techniques for CRISPR identification. CRT's approach to detecting repetitive sequences is straightforward. It uses a simple sequential scan of a DNA sequence and detects repeats directly without any major conversion or preprocessing of the input. This leads to a program that is easy to describe and understand; yet it is very accurate, fast and memory efficient, being O(n) in space and O(nm/l) in time.

  13. CRISPR Recognition Tool (CRT): a tool for automatic detection ofclustered regularly interspaced palindromic repeats

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bland, Charles; Ramsey, Teresa L.; Sabree, Fareedah

    Clustered Regularly Interspaced Palindromic Repeats (CRISPRs) are a novel type of direct repeat found in a wide range of bacteria and archaea. CRISPRs are beginning to attract attention because of their proposed mechanism; that is, defending their hosts against invading extrachromosomal elements such as viruses. Existing repeat detection tools do a poor job of identifying CRISPRs due to the presence of unique spacer sequences separating the repeats. In this study, a new tool, CRT, is introduced that rapidly and accurately identifies CRISPRs in large DNA strings, such as genomes and metagenomes. CRT was compared to CRISPR detection tools, Patscan andmore » Pilercr. In terms of correctness, CRT was shown to be very reliable, demonstrating significant improvements over Patscan for measures precision, recall and quality. When compared to Pilercr, CRT showed improved performance for recall and quality. In terms of speed, CRT also demonstrated superior performance, especially for genomes containing large numbers of repeats. In this paper a new tool was introduced for the automatic detection of CRISPR elements. This tool, CRT, was shown to be a significant improvement over the current techniques for CRISPR identification. CRT's approach to detecting repetitive sequences is straightforward. It uses a simple sequential scan of a DNA sequence and detects repeats directly without any major conversion or preprocessing of the input. This leads to a program that is easy to describe and understand; yet it is very accurate, fast and memory efficient, being O(n) in space and O(nm/l) in time.« less

  14. Effects of blur and repeated testing on sensitivity estimates with frequency doubling perimetry.

    PubMed

    Artes, Paul H; Nicolela, Marcelo T; McCormick, Terry A; LeBlanc, Raymond P; Chauhan, Balwantray C

    2003-02-01

    To investigate the effect of blur and repeated testing on sensitivity with frequency doubling technology (FDT) perimetry. One eye of 12 patients with glaucoma (mean deviation [MD] mean, -2.5 dB, range +0.5 to -4.3 dB) and 11 normal control subjects underwent six consecutive tests with the FDT N30 threshold program in each of two sessions. In session 1, blur was induced by trial lenses (-6.00, -3.00, 0.00, +3.00, and +6.00 D, in random order). In session 2, only the effects of repeated testing were evaluated. The MD and pattern standard deviation (PSD) indices were evaluated as functions of blur and of test order. By correcting the data of session 1 for the reduction of sensitivity with repeated testing (session 2), the effect of blur on FDT sensitivities was established, and its clinical consequences evaluated on total- and pattern-deviation probability maps. FDT sensitivities decreased with blur (by <0.5 dB/D) and with repeated testing (by approximately 2 dB between the first and sixth tests). Blur and repeated testing independently led to larger numbers of locations with significant total and pattern deviation. Sensitivity reductions were similar in normal control subjects and patients with glaucoma, at central and peripheral test locations and at locations with high and low sensitivities. However, patients with glaucoma showed larger deterioration in the total-deviation-probability maps. To optimize the performance of the device, refractive errors should be corrected and immediate retesting avoided. Further research is needed to establish the cause of sensitivity loss with repeated FDT testing.

  15. Development and evaluation of a radar air traffic control research task.

    DOT National Transportation Integrated Search

    1965-12-01

    A system is described in which various elements of the radar air traffic controller's task can be presented repeatedly, reliably, and concurrently to each of six experimental subjects seated at separate task consoles. Programming of display condition...

  16. Inertial and inclinometer based profiler repeatability and accuracy using the IRI model : final report.

    DOT National Transportation Integrated Search

    2012-12-01

    Oregon DOT is transitioning to use the International Roughness Index (IRI) for an incentive\\disincentive program for : pavement smoothness evaluation for newly paved roads. The IRI will typically be determined by contractors using inertial : profiler...

  17. Heat and Freshwater Budgets in the Eastern Pacific Warm Pool

    NASA Astrophysics Data System (ADS)

    Wijesekera, H. W.; Rudnick, D.; Paulson, C. A.; Pierce, S.

    2002-12-01

    Heat and freshwater budgets of the upper ocean in the Eastern Equatorial Pacific warm pool at 10N, 95W are investigated for the 20-day R/V New Horizon survey made as a part of the EPIC-2001 program. We collected underway hydrographic data from a SeaBird CTD mounted on an undulating platform, SeaSoar, and horizontal velocity data from the ship mounted ADCP, along a butterfly pattern centered near 10N, 95W. The time of completion of a single butterfly pattern (146x146 km) at a speed of 8 knots was approximately 36 hours, which is about half an inertial period at 10N. The butterfly survey lasted from September 14 to October 03, 2001. During the 20-day period, temperature and salinity in the upper 20 m dropped by 1.5C and 0.5 psu, respectively, and most of these changes took place over two days of heavy rainfall between September 23 and 24. The near surface became strongly stratified during these rain events. The rainfall signature weakened and mixed down to the top of the pycnocline (~30-m depth) within a few days after the rainfall. The change in fresh water content of the upper 30 m which occurred during the 2-day period of heavy rainfall is equivalent to about 0.12 m of rainfall, which is significantly less than the rainfall observed on the New Horizon. The difference may be due to spatial inhomogeneity in the rainfall and to the neglect of advection. Estimates of advection are presented using ADCP velocities and SeaSoar hydrography. Heat and fresh water budgets are presented by combining surface fluxes, and advection and storage terms.

  18. Spatially explicit spectral analysis of point clouds and geospatial data

    USGS Publications Warehouse

    Buscombe, Daniel D.

    2015-01-01

    The increasing use of spatially explicit analyses of high-resolution spatially distributed data (imagery and point clouds) for the purposes of characterising spatial heterogeneity in geophysical phenomena necessitates the development of custom analytical and computational tools. In recent years, such analyses have become the basis of, for example, automated texture characterisation and segmentation, roughness and grain size calculation, and feature detection and classification, from a variety of data types. In this work, much use has been made of statistical descriptors of localised spatial variations in amplitude variance (roughness), however the horizontal scale (wavelength) and spacing of roughness elements is rarely considered. This is despite the fact that the ratio of characteristic vertical to horizontal scales is not constant and can yield important information about physical scaling relationships. Spectral analysis is a hitherto under-utilised but powerful means to acquire statistical information about relevant amplitude and wavelength scales, simultaneously and with computational efficiency. Further, quantifying spatially distributed data in the frequency domain lends itself to the development of stochastic models for probing the underlying mechanisms which govern the spatial distribution of geological and geophysical phenomena. The software packagePySESA (Python program for Spatially Explicit Spectral Analysis) has been developed for generic analyses of spatially distributed data in both the spatial and frequency domains. Developed predominantly in Python, it accesses libraries written in Cython and C++ for efficiency. It is open source and modular, therefore readily incorporated into, and combined with, other data analysis tools and frameworks with particular utility for supporting research in the fields of geomorphology, geophysics, hydrography, photogrammetry and remote sensing. The analytical and computational structure of the toolbox is described, and its functionality illustrated with an example of a high-resolution bathymetric point cloud data collected with multibeam echosounder.

  19. Progress towards Continental River Dynamics modeling

    NASA Astrophysics Data System (ADS)

    Yu, Cheng-Wei; Zheng, Xing; Liu, Frank; Maidment, Daivd; Hodges, Ben

    2017-04-01

    The high-resolution National Water Model (NWM), launched by U.S. National Oceanic and Atmospheric Administration (NOAA) in August 2016, has shown it is possible to provide real-time flow prediction in rivers and streams across the entire continental United States. The next step for continental-scale modeling is moving from reduced physics (e.g. Muskingum-Cunge) to full dynamic modeling with the Saint-Venant equations. The Simulation Program for River Networks (SPRNT) provides a computational approach for the Saint-Venant equations, but obtaining sufficient channel bathymetric data and hydraulic roughness is seen as a critical challenge. However, recent work has shown the Height Above Nearest Drainage (HAND) method can be applied with the National Elevation Dataset (NED) to provide automated estimation of effective channel bathymetry suitable for large-scale hydraulic simulations. The present work examines the use of SPRNT with the National Hydrography Dataset (NHD) and HAND-derived bathymetry for automated generation of rating curves that can be compared to existing data. The approach can, in theory, be applied to every stream reach in the NHD and thus provide flood guidance where none is available. To test this idea we generated 2000+ rating curves in two catchments in Texas and Alabama (USA). Field data from the USGS and flood records from an Austin, Texas flood in May 2015 were used as validation. Large-scale implementation of this idea requires addressing several critical difficulties associated with numerical instabilities, including ill-posed boundary conditions generated in automated model linkages and inconsistencies in the river geometry. A key to future progress is identifying efficient approaches to isolate numerical instability contributors in a large time-space varying solution. This research was supported in part by the National Science Foundation under grant number CCF-1331610.

  20. δ15Nbulk oscillations linked to monsoon-induced denitrification during the past 1 m.y. in the Eastern Arabian Sea (IODP Exp. 355 Site U1456)

    NASA Astrophysics Data System (ADS)

    Khim, B. K.; Kim, J. E.; Lee, J.; Ikehara, M.; Clift, P. D.; Pandey, D.; Kulhanek, D. K.; Science Party, E.

    2016-12-01

    The Arabian Sea is characterized by a large pool of denitrifying water at intermediate water depths, which plays an important role in the marine nitrogen cycle and resultant response to climate change. A growing body of research emphasizes strong linkage between denitrification strength in the Arabian Sea and climate change at both orbital and millennial timescales. Drilling by International Ocean Discovery Program Expedition 355 was conducted at Site U1456 in the Laxmi Basin, Eastern Arabian Sea, 475 km from the Indian coastline and 820 km south of the modern Indus River Delta. Four lithologic units are defined onboard at the Site U1456. A total of 282 samples were collected from a composite section of Unit I consisting of Holes U1456A and U1456C. Unit I is composed mostly of nannofossil ooze and/or foraminifer-rich nannofossil ooze with interbedded clay, silt, and sand layers. Oxygen isotope measurements of planktonic foraminifera (G. ruber and G. sacculifer), together with shipboard biostratigraphic and paleomagnetic data, constrain the age of Unit I to younger than about 1.2 Ma. The δ15Nbulk values fluctuate from 4.5‰ to 9.6‰ with a mean of 7.3(±0.95)‰. Higher δ15Nbulk values coincide with interglacial intervals whereas lower δ15Nbulk values correspond to glacial intervals, representing clear glacial-interglacial cyclicity. These variations demonstrate the distinct climatic linkage with the degree of denitrification at orbital timescales, in association with changes in hydrography and productivity. The relation between denitrification and monsoon intensity, previously reported for the continental margins of the Arabian Sea, is also recorded in the deep water sediments.

  1. Assessing the condition of bayous and estuaries: Bayou Chico Gulf of Mexico demonstration study

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dickson, K.; Acevedo, M.; Waller, T.

    1995-12-31

    A demonstration study was conducted in May 1994 on Bayou Chico to assess the utility of various assessment and measurement endpoints in determining the condition of bayous and estuaries. Bayou Chico has water quality problems attributed to its low flushing rate and urban/industrial land use in its watershed. The sampling scheme assessed the within-sampling station and spatial variability of measurement endpoints. Fourteen sampling stations in Bayou Chico and 3 stations in Pensacola Bay were selected based on an intensified EMAP sampling grid. Time and space coordinated sampling was conducted for: sediment contaminants and properties, sediment toxicity, water quality, benthic infauna,more » zooplankton and phytoplankton populations. Fish and crabs were also collected and analyzed for a suite of biomarkers and organic chemical residues. Primary productivity was measured via the light bottle dark bottle oxygen method and via diurnal oxygen measurements made with continuous recording data sondes. Stream sites were evaluated for water and sediment quality, water and sediment toxicity, benthic invertebrates and fish. Watershed analyses included assessment of land use/landcover (via SPOT and TM images), soils, pollution sources (point and non-point) and hydrography. These data were coordinated via an Arc/Info GIS system for display and spatial analysis. 1994 survey data were used to parameterize environmental fate models such as SWMM (Storm Water Management Model), DYNHYD5 (WASP5 hydrodynamics model) and WASP5 (Water Quality Analysis Simulation Program) to make predictions about the dynamics and fate of chemical contaminants in Bayou Chico. This paper will present an overview, and report on the results in regards to within-site and spatial variability in Bayou Chico. Conclusions on the efficacy of the assessment and measurement endpoints in evaluating the condition (health) of Bayou Chico will be presented.« less

  2. [Training program design of acupuncture and moxibustion manipulation techniques].

    PubMed

    Dong, Qin

    2009-12-01

    As an important component of acupuncture-moxibustion science, needling and moxibustion is one methodology and technology and its technical characteristics determine its special status and role in training programs. It is closely ralated to meridians-collaterals-acupoints and acupuncture treatment. Therefore, it demands an overall planning for acupuncture professional skills that consists of meridians-collaterals-acupoints knowledge and acupuncture treatment techniques. The practical training courses are the step by step progress involving repeated practices.

  3. Results of the 1983 NASA/JPL balloon flight solar cell calibration program

    NASA Technical Reports Server (NTRS)

    Downing, R. G.; Weiss, R. S.

    1984-01-01

    The 1983 solar cell calibration balloon flight was successfully completed and met all objectives of the program. Thirty-four modules were carried to an altitude of 36.0 kilometers. The calibrated cells can now be used as reference standards in simulator testing of cells and arrays. Cell calibration data are tabulated as well as the repeatability of standard solar cell BFS-17A (35 flights over a 21-year period).

  4. The effects of a prelicensure extern program and nurse residency program on new graduate outcomes and retention.

    PubMed

    Friday, Laura; Zoller, James S; Hollerbach, Ann D; Jones, Katherine; Knofczynski, Greg

    2015-01-01

    Organizations are looking to new graduate nurses to fill expected staffing shortages over the next decade. Creative and effective onboarding programs will determine the success or failure of these graduates as they transition from student to professional nurse. This longitudinal quantitative study with repeated measures used the Casey-Fink Graduate Nurse Experience Survey to investigate the effects of offering a prelicensure extern program and postlicensure residency program on new graduate nurses and organizational outcomes versus a residency program alone. Compared with the nurse residency program alone, the combination of extern program and nurse residency program improved neither the transition factors most important to new nurse graduates during their first year of practice nor a measure important to organizations, retention rates. The additional cost of providing an extern program should be closely evaluated when making financially responsible decisions.

  5. Coastal circulation and hydrography in the Gulf of Tehuantepec, Mexico, during winter

    NASA Astrophysics Data System (ADS)

    Barton, E. D.; Lavín, M. F.; Trasviña, A.

    2009-02-01

    Winter observations of shelf and slope hydrography and currents in the inner Gulf of Tehuantepec are analysed from two field studies in 1989 and 1996 to specify the variability of near-shore conditions under varying wind stress. During the winter period frequent outbursts of 'Norte' winds over the central Gulf result in persistent alongshore inflows along both its eastern and western coasts. Wind-induced variability on time scales of several days strongly influences the shelf currents, but has greater effect on its western coast because of the generation and separation of anticyclonic eddies there. The steadier inflow (˜0.2 m s -1) on the eastern shelf is evident in a strong down-bowing of shallow isosurfaces towards the coast within 100 km of shore, below a wedge of warmer, fresher and lighter water. This persistent entry of less saline (33.4-34.0), warmer water from the southeast clearly originates in buoyancy input by rivers along the Central American coast, but is augmented by a general shoreward tendency (0.2 m s -1) in the southeastern Gulf. The resultant shallow tongue of anomalous water is generally swept offshore in the head of the Gulf and mixed away by the strong outflow and vertical overturning of the frequent 'Norte' events but during wind relaxations the warm, low-salinity coastal flow may briefly extend further west. In the head of the Gulf, flow is predominantly offshore (<0.2 m s -1) as the alongshore component alternates eastward and westward in association with elevation or depression, respectively, of the pycnocline against the shore. More saline, open ocean water is introduced from the north-western side of the Gulf by the inflow along the west coast. During extended wind relaxations, the flow becomes predominantly eastward beyond the shelf while nearshore the coastally trapped buoyant inflow from the southeast penetrates across the entire head of the gulf at least as far as its western limit. On the basis of these and other recent observations, it seems that the accepted view of a broad, persistent Costa Rica Coastal Current (CRCC) is the result of averaging over many relatively sparse observations and that the instantaneous CRCC is a highly variable and convoluted flow around and between constantly changing eddies. The buoyancy-driven shelf current reported here forms a hitherto unrecognized, but major, component of this CRCC system.

  6. The Detection of Change in the Arctic Using Satellite and Buoy Data

    NASA Technical Reports Server (NTRS)

    Comiso, Josefino C.; Yang, J.; Honjo, S.; Krishfield, R.; Koblinsky, Chester J. (Technical Monitor)

    2001-01-01

    The decade of the 1990s is the warmest decade of the last century while the year 1998 is the warmest year ever observed by modern techniques with 9 out of 12 months of the year being the warmest month. Since the Arctic is expected to provide early signals of a possible warming scenario, detailed examination of changes in the Arctic environment is important. In this study, we examined available satellite ice cover and surface temperature data, wind and pressure data, and ocean hydrographic data to gain insights into the warming phenomenon. The areas of open water in both western and eastern regions of the Arctic were found to follow a cyclical pattern with approximately decadal period but with a lag of about three years between the two regions. The pattern was interrupted by unusually large anomalies in open water area in the western region in 1993 and 1998 and in the eastern region in 1995. The big 1998 open water anomaly occurred at the same time when a large surface temperature anomaly was also occurring in the area and adjacent regions. The infrared temperature data show for the first time the complete spatial scope of the warming anomalies and it is apparent that despite the magnitude of the 1998 anomaly, it is basically confined to North America and the Western Arctic. The large increases in open water areas in the Western Sector form 1996 to 1998 were observed to be coherent with changing wind directions which was predominantly cyclonic in 1996 and anti-cyclonic in 1997 and 1998. Detailed hydrography measurements up to 500 m depth over the same general area in April 1996 and April 1997 also indicate significant freshening and warming in the upper part of the mixed layer suggesting increases in ice melt. Continuous ocean temperature and salinity data from ocean buoys confirm this result and show significant seasonal changes from 1996 to 1998, at depths of 8 m, 45 m, and 75 m. Long data records of temperature and hydrography were also examined and the potential impact of a warming, freshening, and the presence of abnormally large open areas on the state of the Arctic climate system are discussed.

  7. Baffin Island and West Greenland Current Systems in northern Baffin Bay

    NASA Astrophysics Data System (ADS)

    Münchow, Andreas; Falkner, Kelly K.; Melling, Humfrey

    2015-03-01

    Temperature, salinity, and direct velocity observations from northern Baffin Bay are presented from a summer 2003 survey. The data reveal interactions between fresh and cold Arctic waters advected southward along Baffin Island and salty and warm Atlantic waters advected northward along western Greenland. Geostrophic currents estimated from hydrography are compared to measured ocean currents above 600 m depth. The Baffin Island Current is well constrained by the geostrophic thermal wind relation, but the West Greenland Current is not. Furthermore, both currents are better described as current systems that contain multiple velocity cores and eddies. We describe a surface-intensified Baffin Island Current seaward of the continental slope off Canada and a bottom-intensified West Greenland Current over the continental slope off Greenland. Acoustic Doppler current profiler observations suggest that the West Greenland Current System advected about 3.8 ± 0.27 Sv (Sv = 106 m3 s-1) towards the north-west at this time. The most prominent features were a surface intensified coastal current advecting 0.5 Sv and a bottom intensified slope current advecting about 2.5 Sv in the same direction. Most of this north-westward circulation turned southward in the Baffin Island Current System. The Baffin Island system was transporting 5.1 ± 0.24 Sv to the south-east at the time that includes additional contributions from Nares Strait to the north (1.0 ± 0.2 Sv) and Lancaster Sound to the east (1.0 ± 0.2 Sv). Net freshwater fluxes were 72 and 187 mSv for the West Greenland and Baffin Island Currents, respectively. Empirical uncertainty arises from unknown temporal variations at weekly time scales and pertubations introduced by unresolved eddies. Eddies with 10 km horizontal and 400 m vertical scales were common and recirculated up to 1 Sv. Our 2003 observations represent conditions when the North-Atlantic Oscillation index (NAO) was close to zero. Analysis of historical hydrographic data averaged along isobaths during NAO-positive years reveals a baroclinic circulation in Baffin Bay more intense than 2003 with stronger southward flow of fresher Arctic waters along Baffin Island and stronger northward inflow of saltier Atlantic waters along Greenland. During negative NAO years this cyclonic circulation weakens as evidenced by a 1979 synoptic survey of the hydrography along Baffin Island.

  8. An assessment of ten ocean reanalyses in the polar regions

    NASA Astrophysics Data System (ADS)

    Uotila, Petteri

    2017-04-01

    Ocean reanalysis (ORA) combines observations either statistically or with a hydrodynamical model, to reconstruct historical changes in the ocean. Global and regional ORA products are increasingly used in polar research, but their quality remains to be systematically assessed. To address this, the Polar ORA Intercomparison Project (PORA-IP) has been established following on from the ORA-IP project (Balmaseda et al. 2015, with other papers in a special issue of Climate Dynamics). The PORA-IP is constituted under the COST EOS initiative with plans to review reanalyses products in both the Arctic and Antarctic, and is endorsed by YOPP - the Year of Polar Prediction project. Currently, the PORA-IP team consists of 21 researchers from 15 institutes and universities. The ORA-IP products with polar physics, such as sea ice, have been updated where necessary and collected in a public database. In addition to model output, available observational polar climatologies are collected and used in the assessments. Due to the extensive variety of products, this database should become a valuable resource outside the PORA-IP community. For a comprehensive evaluation of the ten ORA products (CGLORSv5, ECDA3.1, GECCO2, Glorys2v4, GloSea5_GO5, MOVEG2i, ORAP5, SODA3.3.1, TOPAZ4 and UR025.4) in the Arctic and Southern Oceans several specific diagnostics are assessed. The PORA-IP diagnostics target the following topics: hydrography; heat, salinity and freshwater content; ocean transports and surface currents; mixed layer depth; sea-ice concentration and thickness; and snow thickness over sea ice. Based on these diagnostics, ORA product biases against observed data and their mutual spread are quantified, and possible reasons for discrepancies discussed. So far, we have identified product outliers and evaluated the multi-model mean. We have identified the importance of the atmospheric forcing, air-ocean coupling protocol and sea-ice data assimilation for the product performance. Moreover, we are investigating co-variability between the Arctic Ocean heat content and the North Atlantic heat transport, and between the mixed layer depth, oceanic convection, the upper ocean hydrography and sea ice. We will also present other diagnostic results which provide closely related information for those interested in enhancing model predictive skill over a range of time scales, including seasonal to decadal.

  9. Home Visiting for Adolescent Mothers: Effects on Parenting, Maternal Life Course, and Primary Care Linkage

    PubMed Central

    Barnet, Beth; Liu, Jiexin; DeVoe, Margo; Alperovitz-Bichell, Kari; Duggan, Anne K.

    2007-01-01

    PURPOSE Adolescent mothers are at risk for rapidly becoming pregnant again and for depression, school dropout, and poor parenting. We evaluated the impact of a community-based home-visiting program on these outcomes and on linking the adolescents with primary care. METHODS Pregnant adolescents aged 12 to 18 years, predominantly with low incomes and of African American race, were recruited from urban prenatal care sites and randomly assigned to home visiting or usual care. Trained home visitors, recruited from local communities, were paired with each adolescent and provided services through the child’s second birthday. They delivered a parenting curriculum, encouraged contraceptive use, connected the teen with primary care, and promoted school continuation. Research assistants collected data via structured interviews at baseline and at 1 and 2 years of follow-up using validated instruments to measure parenting (Adult-Adolescent Parenting Inventory) and depression (Center for Epidemiologic Studies Depression). School status and repeat pregnancy were self-reported. We measured program impact over time with intention-to-treat analyses using generalized estimating equations (GEE). RESULTS Of 122 eligible pregnant adolescents, 84 consented, completed baseline assessments, and were randomized to a home-visited group (n = 44) or a control group (n = 40). Eighty-three percent completed year 1 or year 2 follow-up assessments, or both. With GEE, controlling for baseline differences, follow-up parenting scores for home-visited teens were 5.5 points higher than those for control teens (95% confidence interval, 0.5–10.4 points; P = .03) and their adjusted odds of school continuation were 3.5 times greater (95% confidence interval, 1.1–11.8; P <.05). The program did not have any impact on repeat pregnancy, depression, or linkage with primary care. CONCLUSIONS This community-based home-visiting program improved adolescent mothers’ parenting attitudes and school continuation, but it did not reduce their odds of repeat pregnancy or depression or achieve coordination with primary care. Coordinated care may require explicit mechanisms to promote communication between the community program and primary care. PMID:17548850

  10. Monitoring post-fire vegetation rehabilitation projects: A common approach for non-forested ecosystems

    USGS Publications Warehouse

    Wirth, Troy A.; Pyke, David A.

    2007-01-01

    Emergency Stabilization and Rehabilitation (ES&R) and Burned Area Emergency Response (BAER) treatments are short-term, high-intensity treatments designed to mitigate the adverse effects of wildfire on public lands. The federal government expends significant resources implementing ES&R and BAER treatments after wildfires; however, recent reviews have found that existing data from monitoring and research are insufficient to evaluate the effects of these activities. The purpose of this report is to: (1) document what monitoring methods are generally used by personnel in the field; (2) describe approaches and methods for post-fire vegetation and soil monitoring documented in agency manuals; (3) determine the common elements of monitoring programs recommended in these manuals; and (4) describe a common monitoring approach to determine the effectiveness of future ES&R and BAER treatments in non-forested regions. Both qualitative and quantitative methods to measure effectiveness of ES&R treatments are used by federal land management agencies. Quantitative methods are used in the field depending on factors such as funding, personnel, and time constraints. There are seven vegetation monitoring manuals produced by the federal government that address monitoring methods for (primarily) vegetation and soil attributes. These methods vary in their objectivity and repeatability. The most repeatable methods are point-intercept, quadrat-based density measurements, gap intercepts, and direct measurement of soil erosion. Additionally, these manuals recommend approaches for designing monitoring programs for the state of ecosystems or the effect of management actions. The elements of a defensible monitoring program applicable to ES&R and BAER projects that most of these manuals have in common are objectives, stratification, control areas, random sampling, data quality, and statistical analysis. The effectiveness of treatments can be determined more accurately if data are gathered using an approach that incorporates these six monitoring program design elements and objectives, as well as repeatable procedures to measure cover, density, gap intercept, and soil erosion within each ecoregion and plant community. Additionally, using a common monitoring program design with comparable methods, consistently documenting results, and creating and maintaining a central database for query and reporting, will ultimately allow a determination of the effectiveness of post-fire rehabilitation activities region-wide.

  11. SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data

    USGS Publications Warehouse

    Miller, Mark P.; Knaus, Brian J.; Mullins, Thomas D.; Haig, Susan M.

    2013-01-01

    SSR_pipeline is a flexible set of programs designed to efficiently identify simple sequence repeats (e.g., microsatellites) from paired-end high-throughput Illumina DNA sequencing data. The program suite contains 3 analysis modules along with a fourth control module that can automate analyses of large volumes of data. The modules are used to 1) identify the subset of paired-end sequences that pass Illumina quality standards, 2) align paired-end reads into a single composite DNA sequence, and 3) identify sequences that possess microsatellites (both simple and compound) conforming to user-specified parameters. The microsatellite search algorithm is extremely efficient, and we have used it to identify repeats with motifs from 2 to 25bp in length. Each of the 3 analysis modules can also be used independently to provide greater flexibility or to work with FASTQ or FASTA files generated from other sequencing platforms (Roche 454, Ion Torrent, etc.). We demonstrate use of the program with data from the brine fly Ephydra packardi (Diptera: Ephydridae) and provide empirical timing benchmarks to illustrate program performance on a common desktop computer environment. We further show that the Illumina platform is capable of identifying large numbers of microsatellites, even when using unenriched sample libraries and a very small percentage of the sequencing capacity from a single DNA sequencing run. All modules from SSR_pipeline are implemented in the Python programming language and can therefore be used from nearly any computer operating system (Linux, Macintosh, and Windows).

  12. SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data.

    PubMed

    Miller, Mark P; Knaus, Brian J; Mullins, Thomas D; Haig, Susan M

    2013-01-01

    SSR_pipeline is a flexible set of programs designed to efficiently identify simple sequence repeats (e.g., microsatellites) from paired-end high-throughput Illumina DNA sequencing data. The program suite contains 3 analysis modules along with a fourth control module that can automate analyses of large volumes of data. The modules are used to 1) identify the subset of paired-end sequences that pass Illumina quality standards, 2) align paired-end reads into a single composite DNA sequence, and 3) identify sequences that possess microsatellites (both simple and compound) conforming to user-specified parameters. The microsatellite search algorithm is extremely efficient, and we have used it to identify repeats with motifs from 2 to 25 bp in length. Each of the 3 analysis modules can also be used independently to provide greater flexibility or to work with FASTQ or FASTA files generated from other sequencing platforms (Roche 454, Ion Torrent, etc.). We demonstrate use of the program with data from the brine fly Ephydra packardi (Diptera: Ephydridae) and provide empirical timing benchmarks to illustrate program performance on a common desktop computer environment. We further show that the Illumina platform is capable of identifying large numbers of microsatellites, even when using unenriched sample libraries and a very small percentage of the sequencing capacity from a single DNA sequencing run. All modules from SSR_pipeline are implemented in the Python programming language and can therefore be used from nearly any computer operating system (Linux, Macintosh, and Windows).

  13. Protein domain analysis of genomic sequence data reveals regulation of LRR related domains in plant transpiration in Ficus.

    PubMed

    Lang, Tiange; Yin, Kangquan; Liu, Jinyu; Cao, Kunfang; Cannon, Charles H; Du, Fang K

    2014-01-01

    Predicting protein domains is essential for understanding a protein's function at the molecular level. However, up till now, there has been no direct and straightforward method for predicting protein domains in species without a reference genome sequence. In this study, we developed a functionality with a set of programs that can predict protein domains directly from genomic sequence data without a reference genome. Using whole genome sequence data, the programming functionality mainly comprised DNA assembly in combination with next-generation sequencing (NGS) assembly methods and traditional methods, peptide prediction and protein domain prediction. The proposed new functionality avoids problems associated with de novo assembly due to micro reads and small single repeats. Furthermore, we applied our functionality for the prediction of leucine rich repeat (LRR) domains in four species of Ficus with no reference genome, based on NGS genomic data. We found that the LRRNT_2 and LRR_8 domains are related to plant transpiration efficiency, as indicated by the stomata index, in the four species of Ficus. The programming functionality established in this study provides new insights for protein domain prediction, which is particularly timely in the current age of NGS data expansion.

  14. Exploring repeat HIV testing among men who have sex with men in Cape Town and Port Elizabeth, South Africa.

    PubMed

    Siegler, Aaron J; Sullivan, Patrick S; de Voux, Alex; Phaswana-Mafuya, Nancy; Bekker, Linda-Gail; Baral, Stefan D; Winskell, Kate; Kose, Zamakayise; Wirtz, Andrea L; Brown, Ben; Stephenson, Rob

    2015-01-01

    Despite the high prevalence of HIV among men who have sex with men (MSM) - and the general adult population - in South Africa, there is little data regarding the extent to which MSM seek repeat testing for HIV. This study explores reported histories of HIV testing, and the rationales for test seeking, among a purposive sample of 34 MSM in two urban areas of South Africa. MSM participated in activity-based in-depth interviews that included a timeline element to facilitate discussion. Repeat HIV testing was limited among participants, with three-quarters having two or fewer lifetime HIV tests, and over one-third of the sample having one or fewer lifetime tests. For most repeat testers, the time gap between their HIV tests was greater than the one-year interval recommended by national guidelines. Analysis of the reasons for seeking HIV testing revealed several types of rationale. The reasons for a first HIV test were frequently one-time occurrences, such as a requirement prior to circumcision, or motivations likely satisfied by a single HIV test. For MSM who reported repeat testing at more timely intervals, the most common rationale was seeking test results with a sex partner. Results indicate a need to shift HIV test promotion messaging and programming for MSM in South Africa away from a one-off model to one that frames HIV testing as a repeated, routine health maintenance behavior.

  15. Work, Gender, and Teaching.

    ERIC Educational Resources Information Center

    Apple, Michael W.

    1983-01-01

    The connections between class and gender must be recognized if attempts to rationalize and proletarianize teaching are to be understood. Behaviorally-specified curriculum, prepackaged programs, and repeated testing and accountability measures represent attempts by state governments and by male administrators to wrest control of instruction from a…

  16. History Never Repeats Itself

    ERIC Educational Resources Information Center

    Burawoy, Michael

    2009-01-01

    In his presidential address Jess Gilbert examines two democratic experiments of the United States Department of Agriculture (USDA) during the New Deal: first, county planning that coordinated federal programs through citizen committees, and second, land redistribution to landless southern farmers, including a small number of black sharecroppers…

  17. Don't just repeat after me: retrieval practice is better than imitation for foreign vocabulary learning.

    PubMed

    Kang, Sean H K; Gollan, Tamar H; Pashler, Harold

    2013-12-01

    Second language (L2) instruction programs often ask learners to repeat aloud words spoken by a native speaker. However, recent research on retrieval practice has suggested that imitating native pronunciation might be less effective than drill instruction, wherein the learner is required to produce the L2 words from memory (and given feedback). We contrasted the effectiveness of imitation and retrieval practice drills on learning L2 spoken vocabulary. Learners viewed pictures of objects and heard their names; in the imitation condition, they heard and then repeated aloud each name, whereas in the retrieval practice condition, they tried to produce the name before hearing it. On a final test administered either immediately after training (Exp. 1) or after a 2-day delay (Exp. 2), retrieval practice produced better comprehension of the L2 words, better ability to produce the L2 words, and no loss of pronunciation quality.

  18. Self-inflicted injuries. Challenging knowledge, skill, and compassion.

    PubMed

    Haswell, D E; Graham, M

    1996-09-01

    Self-inflicted injuries and other serious self-destructive behaviours are common and difficult to recognize, prevent, and manage. Although they have previously been understood as repeated, failed attempts at suicide, they are better understood as maladaptive coping strategies. Women who present repeatedly with self-inflicted injuries need help to control this self-destructive behaviour and substitute more positive coping strategies. Physicians also need help in working with patients who respond to problems in this way. The program is made up of two broad sections. The first section involves understanding the problem and its origins in post-traumatic stress disorders. The second section offers a practical approach to helping patients presenting with injuries inflict upon themselves. A deeper understanding of the etiology and management of repeated self-inflicted injuries will enable physicians to help patients with this difficult problem while minimizing their own anxiety and frustration.

  19. The efficacy of a senior outreach program in the reduction of hospital readmissions and emergency department visits among chronically ill seniors.

    PubMed

    Prior, Michael K; Bahret, Beverly A; Allen, Reva I; Pasupuleti, Sudershan

    2012-01-01

    This study reports on the effectiveness of a community-based senior outreach program in decreasing rehospitalizations and emergency department visits among chronically ill seniors. Participants had been repeatedly hospitalized with chronic illnesses and were subsequently served in an in-home program designed to address their psychosocial and medical needs. Participation in the program was found to be related to lower hospital readmission rates and emergency department usage. Clients also reported decreased financial concerns and depression and anxiety and increased social support. The study adds to the growing body of work supporting community-based programs as effective strategies for decreasing health care usage and improving quality of life for chronically ill seniors.

  20. Final Report of the Director on the Combined Second and Third Level National Defense Language Institute for Elementary and Secondary School Teachers of German Conducted by Stanford University at Bad Boll, Germany.

    ERIC Educational Resources Information Center

    Strothmann, F. W.; Lohnes, Walter F. W.

    This is the final report on the National Defense Language Institute conducted in Germany during the summer of 1963 for elementary and secondary school teachers of German. It is recommended that the program be repeated, with certain adjustments. The Institute held second- and third-level programs. It was concluded that the participants' teaching…

  1. Healthy Schools-Healthy Kids: a controlled evaluation of a comprehensive universal eating disorder prevention program.

    PubMed

    McVey, Gail; Tweed, Stacey; Blackmore, Elizabeth

    2007-06-01

    This study was a controlled evaluation of a comprehensive school-based universal prevention program involving male and female students, parents, teachers, school administrators and local public health professionals. A total of 982 male and female Grades 6 and 7 middle school students (and 91 teachers/school administrators) completed self-report surveys at baseline on measures of body satisfaction, internalization of media ideals, size acceptance, disordered eating, weight-based teasing, weight loss and muscle-gaining behaviours, and perceptions of school climate (teachers only). Eighty-four percent of the students repeated the surveys immediately following the 8-month school-wide intervention and 71% again 6 months later. Repeated measures ANCOVAs revealed that participation in the Healthy Schools-Healthy Kids (HS-HK) program had a positive influence by reducing the internalization of media ideals among male and female students and by reducing disordered eating among female students. The program was also associated with reductions in weight-loss behaviours among the students, although this effect was lost by the 6-month follow-up. When the intervention students were sub-divided into low versus high-risk groups, the high-risk group appeared to benefit most from the intervention with significant reductions in internalization of media ideals, greater body satisfaction, and reduced disordered eating over time. There were no intervention effects for teachers. Challenges of engaging teachers in prevention are discussed.

  2. Analysis of 100-lb(sub f) (445-N) LO2-LCH4 Reaction Control Engine Impulse Bit Performance

    NASA Technical Reports Server (NTRS)

    Marshall, William M.; Klenhenz, Julie E.

    2012-01-01

    Recently, liquid oxygen-liquid methane (LO2-LCH4) has been considered as a potential green propellant alternative for future exploration missions. The Propulsion and Cryogenic Advanced Development (PCAD) project was tasked by NASA to develop this propulsion combination to enable safe and cost-effective exploration missions. To date, limited experience with such combinations exist, and as a result a comprehensive test program is critical to demonstrating with the viability of implementing such a system. The NASA Glenn Research Center conducted a test program of a 100-lbf (445-N) reaction control engine (RCE) at the Center s Altitude Combustion Stand (ACS), focusing on altitude testing over a wide variety of operational conditions. The ACS facility includes unique propellant conditioning feed systems (PCFS), which allow precise control of propellant inlet conditions to the engine. Engine performance as a result of these inlet conditions was examined extensively during the test program. This paper is a companion to the previous specific impulse testing paper, and discusses the pulsed-mode operation portion of testing, with a focus on minimum impulse bit (MIB) and repeatable pulse performance. The engine successfully demonstrated target MIB performance at all conditions, as well as successful demonstration of repeatable pulse widths. Some anomalous conditions experienced during testing are also discussed, including a double pulse phenomenon, which was not noted in previous test programs for this engine.

  3. Galileo Parachute System modification program

    NASA Technical Reports Server (NTRS)

    Mcmenamin, H. J.; Pochettino, L. R.

    1984-01-01

    This paper discusses the development program conducted on the Galileo Parachute System following the slow opening performance of the main parachute during the first system drop test. The parachute system is part of the Galileo entry probe that will descend through the Jupiter atmosphere. The uncontrolled parachute opening experienced in this test was not acceptable for the probe system. Therefore, the main parachute design was modified and the system sequence was changed to prevent a recurrence. These alterations and their system effects were evaluated analytically, and in a ground test program. At the conclusion of this phase, the system drop test was successfully repeated.

  4. Repeat workers' compensation claims: risk factors, costs and work disability

    PubMed Central

    2011-01-01

    Background The objective of our study was to describe factors associated with repeat workers' compensation claims and to compare the work disability arising in workers with single and multiple compensation claims. Methods All initial injury claims lodged by persons of working age during a five year period (1996 to 2000) and any repeat claims were extracted from workers' compensation administrative data in the state of Victoria, Australia. Groups of workers with single and multiple claims were identified. Descriptive analysis of claims by affliction, bodily location, industry segment, occupation, employer and workplace was undertaken. Survival analysis determined the impact of these variables on the time between the claims. The economic impact and duration of work incapacity associated with initial and repeat claims was compared between groups. Results 37% of persons with an initial claim lodged a second claim. This group contained a significantly greater proportion of males, were younger and more likely to be employed in manual occupations and high-risk industries than those with single claims. 78% of repeat claims were for a second injury. Duration between the claims was shortest when the working conditions had not changed. The initial claims of repeat claimants resulted in significantly (p < 0.001) lower costs and work disability than the repeat claims. Conclusions A substantial proportion of injured workers experience a second occupational injury or disease. These workers pose a greater economic burden than those with single claims, and also experience a substantially greater cumulative period of work disability. There is potential to reduce the social, health and economic burden of workplace injury by enacting prevention programs targeted at these workers. PMID:21696637

  5. Biological sequence compression algorithms.

    PubMed

    Matsumoto, T; Sadakane, K; Imai, H

    2000-01-01

    Today, more and more DNA sequences are becoming available. The information about DNA sequences are stored in molecular biology databases. The size and importance of these databases will be bigger and bigger in the future, therefore this information must be stored or communicated efficiently. Furthermore, sequence compression can be used to define similarities between biological sequences. The standard compression algorithms such as gzip or compress cannot compress DNA sequences, but only expand them in size. On the other hand, CTW (Context Tree Weighting Method) can compress DNA sequences less than two bits per symbol. These algorithms do not use special structures of biological sequences. Two characteristic structures of DNA sequences are known. One is called palindromes or reverse complements and the other structure is approximate repeats. Several specific algorithms for DNA sequences that use these structures can compress them less than two bits per symbol. In this paper, we improve the CTW so that characteristic structures of DNA sequences are available. Before encoding the next symbol, the algorithm searches an approximate repeat and palindrome using hash and dynamic programming. If there is a palindrome or an approximate repeat with enough length then our algorithm represents it with length and distance. By using this preprocessing, a new program achieves a little higher compression ratio than that of existing DNA-oriented compression algorithms. We also describe new compression algorithm for protein sequences.

  6. The effect of Ku on telomere replication time is mediated by telomere length but is independent of histone tail acetylation.

    PubMed

    Lian, Hui-Yong; Robertson, E Douglas; Hiraga, Shin-ichiro; Alvino, Gina M; Collingwood, David; McCune, Heather J; Sridhar, Akila; Brewer, Bonita J; Raghuraman, M K; Donaldson, Anne D

    2011-05-15

    DNA replication in Saccharomyces cerevisiae proceeds according to a temporal program. We have investigated the role of the telomere-binding Ku complex in specifying late replication of telomere-proximal sequences. Genome-wide analysis shows that regions extending up to 80 kb from telomeres replicate abnormally early in a yku70 mutant. We find that Ku does not appear to regulate replication time by binding replication origins directly, nor is its effect on telomere replication timing mediated by histone tail acetylation. We show that Ku instead regulates replication timing through its effect on telomere length, because deletion of the telomerase regulator Pif1 largely reverses the short telomere defect of a yku70 mutant and simultaneously rescues its replication timing defect. Consistent with this conclusion, deleting the genome integrity component Elg1 partially rescued both length and replication timing of yku70 telomeres. Telomere length-mediated control of replication timing requires the TG(1-3) repeat-counting component Rif1, because a rif1 mutant replicates telomeric regions early, despite having extended TG(1-3) tracts. Overall, our results suggest that the effect of Ku on telomere replication timing results from its impact on TG(1-3) repeat length and support a model in which Rif1 measures telomere repeat length to ensure that telomere replication timing is correctly programmed.

  7. Darwin, Dogs and DNA: Freshman Writing about Biology.

    ERIC Educational Resources Information Center

    Grant, Michael C.; Pirrto, John

    1994-01-01

    Describes a successful interdepartmental program at a major research-oriented university that melds freshman writing with freshman biology. Extensive, repeated feedback on individual student writing projects from two instructors appears to work synergistically so that student learning is significantly enhanced. Particulars derived from five years…

  8. CONVERGENCE OF ECOLOGICAL ASSESSMENT AND RISK ASSESSMENT: TOWARDS HOLISTIC ENVIRONMENTAL PROTECTION

    EPA Science Inventory

    A major emphasis of environmental monitoring and assessment programs is to characterize the condition of natural resources. When repeated through time, ecological assessments (EA) can be used to track changes in environmental condition that reflect on the efficacy of regulatory a...

  9. 76 FR 47178 - Energy Efficiency Program: Test Procedure for Lighting Systems (Luminaires)

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-08-04

    ...: Test Procedure for Lighting Systems (Luminaires) AGENCY: Office of Energy Efficiency and Renewable... (``DOE'' or the ``Department'') is currently evaluating energy efficiency test procedures for luminaires... products. DOE recognizes that well-designed test procedures are important to produce reliable, repeatable...

  10. Accuracy Analysis and Validation of the Mars Science Laboratory (MSL) Robotic Arm

    NASA Technical Reports Server (NTRS)

    Collins, Curtis L.; Robinson, Matthew L.

    2013-01-01

    The Mars Science Laboratory (MSL) Curiosity Rover is currently exploring the surface of Mars with a suite of tools and instruments mounted to the end of a five degree-of-freedom robotic arm. To verify and meet a set of end-to-end system level accuracy requirements, a detailed positioning uncertainty model of the arm was developed and exercised over the arm operational workspace. Error sources at each link in the arm kinematic chain were estimated and their effects propagated to the tool frames.A rigorous test and measurement program was developed and implemented to collect data to characterize and calibrate the kinematic and stiffness parameters of the arm. Numerous absolute and relative accuracy and repeatability requirements were validated with a combination of analysis and test data extrapolated to the Mars gravity and thermal environment. Initial results of arm accuracy and repeatability on Mars demonstrate the effectiveness of the modeling and test program as the rover continues to explore the foothills of Mount Sharp.

  11. TV as storyteller: how exposure to television narratives impacts at-risk preschoolers' story knowledge and narrative skills.

    PubMed

    Linebarger, Deborah L; Piotrowski, Jessica Taylor

    2009-03-01

    Educational media serve as informal educators within the home by supplementing young children's development. Substantial evidence documents the contributions of educational television to preschoolers' acquisition of a variety of skills; however, television's natural capacity as storyteller and the role it plays in preschoolers' early literacy development has been largely overlooked. This study examined the effects of viewing different TV program types on 311 at-risk preschoolers' story knowledge and narrative skills. Children were assigned to one of 4 viewing conditions (i.e. watching up to 40 episodes of a particular program type): no viewing; expository; embedded narrative; or traditional narrative. Story knowledge scores were higher for those viewing either narrative type. In contrast, viewing specific narrative types differentially affected the component skills of narrative competence. Story retelling and identification of explicit story events were higher after repeat viewing of embedded narratives while generating implicit story content was higher after repeat viewing of traditional narratives.

  12. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Crowder, Stephen V.

    This document outlines a statistical framework for establishing a shelf-life program for components whose performance is measured by the value of a continuous variable such as voltage or function time. The approach applies to both single measurement devices and repeated measurement devices, although additional process control charts may be useful in the case of repeated measurements. The approach is to choose a sample size that protects the margin associated with a particular variable over the life of the component. Deviations from expected performance of the measured variable are detected prior to the complete loss of margin. This ensures the reliabilitymore » of the component over its lifetime.« less

  13. The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

    PubMed Central

    Grissa, Ibtissem; Vergnaud, Gilles; Pourcel, Christine

    2007-01-01

    Background In Archeae and Bacteria, the repeated elements called CRISPRs for "clustered regularly interspaced short palindromic repeats" are believed to participate in the defence against viruses. Short sequences called spacers are stored in-between repeated elements. In the current model, motifs comprising spacers and repeats may target an invading DNA and lead to its degradation through a proposed mechanism similar to RNA interference. Analysis of intra-species polymorphism shows that new motifs (one spacer and one repeated element) are added in a polarised fashion. Although their principal characteristics have been described, a lot remains to be discovered on the way CRISPRs are created and evolve. As new genome sequences become available it appears necessary to develop automated scanning tools to make available CRISPRs related information and to facilitate additional investigations. Description We have produced a program, CRISPRFinder, which identifies CRISPRs and extracts the repeated and unique sequences. Using this software, a database is constructed which is automatically updated monthly from newly released genome sequences. Additional tools were created to allow the alignment of flanking sequences in search for similarities between different loci and to build dictionaries of unique sequences. To date, almost six hundred CRISPRs have been identified in 475 published genomes. Two Archeae out of thirty-seven and about half of Bacteria do not possess a CRISPR. Fine analysis of repeated sequences strongly supports the current view that new motifs are added at one end of the CRISPR adjacent to the putative promoter. Conclusion It is hoped that availability of a public database, regularly updated and which can be queried on the web will help in further dissecting and understanding CRISPR structure and flanking sequences evolution. Subsequent analyses of the intra-species CRISPR polymorphism will be facilitated by CRISPRFinder and the dictionary creator. CRISPRdb is accessible at PMID:17521438

  14. C9orf72 hexanucleotide repeat expansion and Guam amyotrophic lateral sclerosis-Parkinsonism-dementia complex.

    PubMed

    Dombroski, Beth A; Galasko, Douglas R; Mata, Ignacio F; Zabetian, Cyrus P; Craig, Ulla-Katrina; Garruto, Ralph M; Oyanagi, Kiyomitsu; Schellenberg, Gerard D

    2013-06-01

    High-prevalence foci of amyotrophic lateral sclerosis (ALS) and parkinsonism-dementia complex (PDC) exist in Japanese on the Kii Peninsula of Japan and in the Chamorros of Guam. Clinical and neuropathologic similarities suggest that the disease in these 2 populations may be related. Recent findings showed that some of the Kii Peninsula ALS cases had pathogenic C9orf72 repeat expansions, a genotype that causes ALS in Western populations. To perform genotyping among Guam residents to determine if the C9orf72 expanded repeat allele contributes to ALS-PDC in this population and to evaluate LRRK2 for mutations in the same population. Case-control series from neurodegenerative disease research programs on Guam that screened residents for ALS, PDC, and dementia. Study participants included 24 with ALS and 22 with PDC and 43 older control subjects with normal cognition ascertained between 1956 and 2006. All but one participant were Chamorro, the indigenous people of Guam. A single individual of white race/ethnicity with ALS was ascertained on Guam during the study. Participants were screened for C9orf72 hexanucleotide repeat length. Participants with repeat numbers in great excess of 30 were considered to have pathogenic repeat expansions. LRRK2 was screened for point mutations by DNA sequencing. We found a single individual with an expanded pathogenic hexanucleotide repeat. This individual of white race/ethnicity with ALS was living on Guam at the time of ascertainment but had been born in the United States. All Chamorro participants with ALS and PDC and control subjects had normal repeats, ranging from 2 to 17 copies. No pathogenic LRRK2 mutations were found. Unlike participants with ALS from the Kii Peninsula, C9orf72 expansions do not cause ALS-PDC in Chamorros. Likewise, LRRK2 mutations do not cause Guam ALS-PDC.

  15. A comparison of pairs figure skaters in repeated jumps.

    PubMed

    Sands, William A; Kimmel, Wendy L; McNeal, Jeni R; Murray, Steven Ross; Stone, Michael H

    2012-01-01

    Trends in pairs figure skating have shown that increasingly difficult jumps have become an essential aspect of high-level performance, especially in the latter part of a competitive program. We compared a repeated jump power index in a 60 s repeated jump test to determine the relationship of repeated jump test to competitive rank and to measure 2D hip, knee, and ankle angles and angular velocities at 0, 20, 40, and 60 s. Eighteen National Team Pairs Figure Skaters performed a 60 s repeated jump test on a large switch-mat with timing of flight and ground durations and digital video recording. Each 60-s period was divided into 6, 10-s intervals, with power indexes (W/kg) calculated for each 10-s interval. Power index by 10-s interval repeated measures ANOVAs (RMANOVA) showed that males exceeded females at all intervals, and the highest power index interval was during 10 to 20 s for both sexes. RMANOVAs of angles and angular velocities showed main effects for time only. Power index and jumping techniques among figure skaters showed rapid and steady declines over the test duration. Power index can predict approximately 50% of competitive rank variance, and sex differences in jumping technique were rare. Key pointsThe repeated jumps test can account for about 50% of the variance in pairs ranks.Changes in technique are largely due to fatigue, but the athletes were able to maintain a maximum flexion knee angle very close to the desired 90 degrees. Changes in angular velocity and jump heights occurred as expected, again probably due to fatigue.As expected from metabolic information, the athletes' power indexes peak around 20s and decline thereafter. Coaches should be aware of this time as a boundary beyond which fatigue becomes more manifest, and use careful choreographic choices to provide rest periods that are disguised as less demanding skating elements to afford recovery.The repeated jumps test may be a helpful off-ice test of power-endurance for figure skaters.

  16. Articulation Workshop in Drafting. Final Report.

    ERIC Educational Resources Information Center

    Catonsville Community Coll., MD.

    Drafting students from vocational/technical and high schools frequently repeat the same experiences and courses and work with the same instructional materials when they enroll in college engineering drawing, and architecture programs. In order to minimize needless repetition and address the problem of articulation between such schools and the…

  17. 40 CFR 60.2725 - May I conduct a repeat performance test to establish new operating limits?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) STANDARDS OF PERFORMANCE FOR NEW STATIONARY SOURCES Emissions Guidelines and Compliance Times for Commercial and Industrial Solid Waste Incineration Units Model... during any performance test used to demonstrate compliance. Model Rule—Monitoring ...

  18. 40 CFR 60.2725 - May I conduct a repeat performance test to establish new operating limits?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... PROTECTION AGENCY (CONTINUED) AIR PROGRAMS (CONTINUED) STANDARDS OF PERFORMANCE FOR NEW STATIONARY SOURCES Emissions Guidelines and Compliance Times for Commercial and Industrial Solid Waste Incineration Units Model... during any performance test used to demonstrate compliance. Model Rule—Monitoring ...

  19. Read Naturally. What Works Clearinghouse Intervention Report

    ERIC Educational Resources Information Center

    What Works Clearinghouse, 2007

    2007-01-01

    "Read Naturally" is designed to improve reading fluency using a combination of books, audiotapes, and computer software. According to the developer's web site, this program has three main strategies: repeated reading of text for developing oral reading fluency, teacher modeling of story reading, and systematic monitoring of student…

  20. Development of electrochemical super capacitors for EMA applications

    NASA Technical Reports Server (NTRS)

    Kosek, J. A.; Dunning, T.; Laconti, A. B.

    1995-01-01

    In a NASA SBIR Phase I program (Contract No. NAS8-40119), Giner, Inc. evaluated the feasibility of fabricating an all-solid-ionomer multicell electrochemical capacitor having a unit cell capacitance greater than 2 F/sq cm and a repeating element thickness of 6 mils. This capacitor can possibly be used by NASA as a high-rate energy source for electromechanical actuator (EMA) activation for advanced space missions. The high unit cell capacitance and low repeating element thickness will allow for the fabrication of a low-volume, low-weight device, favorable characteristics for space applications. These same characteristics also make the capacitor attractive for terrestrial applications, such as load-leveling batteries or fuel cells in electric vehicle applications. Although the projected energy densities for electrochemical capacitors are about two orders of magnitude lower than that of batteries, the high-power-density characteristics of these devices render them as potentially viable candidates for meeting pulse or peak electrical power requirements for some anticipated aerospace mission scenarios, especially those with discharge times on the millisecond to second time scale. On a volumetric or gravimetric basis, the advantages of utilizing electrochemical capacitors rather than batteries for meeting the peak power demands associated with a specific mission scenario will largely depend upon the total and pulse durations of the power peaks. The effect of preparation conditions on RuO(x), the active component in an all-solid-ionomer electrochemical capacitor, was evaluated during this program. Methods were identified to prepare RuO(x) having a surface areagreater than 180 sq m/g, and a capacitance of greater than 2 F/sq cm. Further efforts to reproducibly obtain these high-surface-area materials in scaled-up batches will be evaluated in Phase 2. During this Phase 1 program we identified a superior Nafion 105 membrane, having a film thickness of 5 mils, that showed excellent performance in our all-solid-ionomer capacitors and resulted in electrochemical capacitors with a repeating element thickness of 8 mils. We are currently working with membrane manufacturers to obtain a high performance membrane in less than 3 mil thickness to obtain a repeating element thickness of 6 mils or less. A 10-cell all-solid ionomer capacitor stack, with each cell having a 222 sq cm active area, was fabricated and evaluated as part of the Phase 1 program. Further Scale-up of a high-energy-density stack is plannedin Phase 2.

  1. Repeated short climatic change affects the epidermal differentiation program and leads to matrix remodeling in a human organotypic skin model.

    PubMed

    Boutrand, Laetitia-Barbollat; Thépot, Amélie; Muther, Charlotte; Boher, Aurélie; Robic, Julie; Guéré, Christelle; Vié, Katell; Damour, Odile; Lamartine, Jérôme

    2017-01-01

    Human skin is subject to frequent changes in ambient temperature and humidity and needs to cope with these environmental modifications. To decipher the molecular response of human skin to repeated climatic change, a versatile model of skin equivalent subject to "hot-wet" (40°C, 80% relative humidity [RH]) or "cold-dry" (10°C, 40% RH) climatic stress repeated daily was used. To obtain an exhaustive view of the molecular mechanisms elicited by climatic change, large-scale gene expression DNA microarray analysis was performed and modulated function was determined by bioinformatic annotation. This analysis revealed several functions, including epidermal differentiation and extracellular matrix, impacted by repeated variations in climatic conditions. Some of these molecular changes were confirmed by histological examination and protein expression. Both treatments (hot-wet and cold-dry) reduced the expression of genes encoding collagens, laminin, and proteoglycans, suggesting a profound remodeling of the extracellular matrix. Strong induction of the entire family of late cornified envelope genes after cold-dry exposure, confirmed at protein level, was also observed. These changes correlated with an increase in epidermal differentiation markers such as corneodesmosin and a thickening of the stratum corneum, indicating possible implementation of defense mechanisms against dehydration. This study for the first time reveals the complex pattern of molecular response allowing adaption of human skin to repeated change in its climatic environment.

  2. Status of a UAV SAR Designed for Repeat Pass Interferometry for Deformation Measurements

    NASA Technical Reports Server (NTRS)

    Hensley, Scott; Wheeler, Kevin; Hoffman, Jim; Miller, Tim; Lou, Yunling; Muellerschoen, Ron; Zebker, Howard; Madsen, Soren; Rosen, Paul

    2004-01-01

    Under the NASA ESTO sponsored Instrument Incubator Program we have designed a lightweight, reconfigurable polarimetric L-band SAR designed for repeat pass deformation measurements of rapidly deforming surfaces of geophysical interest such as volcanoes or earthquakes. This radar will be installed on an unmanned airborne vehicle (UAV) or a lightweight, high-altitude, and long endurance platform such as the Proteus. After a study of suitable available platforms we selected the Proteus for initial development and testing of the system. We want to control the repeat track capability of the aircraft to be within a 10 m tube to support the repeat deformation capability. We conducted tests with the Proteus using real-time GPS with sub-meter accuracy to see if pilots could fly the aircraft within the desired tube. Our results show that pilots are unable to fly the aircraft with the desired accuracy and therefore an augmented autopilot will be required to meet these objectives. Based on the Proteus flying altitude of 13.7 km (45,000 ft), we are designing a fully polarimetric L-band radar with 80 MHz bandwidth and 16 km range swath. This radar will have an active electronic beam steering antenna to achieve Doppler centroid stability that is necessary for repeat-pass interferometry (RPI). This paper will present are design criteria, current design and expected science applications.

  3. Asymmetric training using virtual reality reflection equipment and the enhancement of upper limb function in stroke patients: a randomized controlled trial.

    PubMed

    Lee, DongJin; Lee, MyungMo; Lee, KyoungJin; Song, ChangHo

    2014-07-01

    Asymmetric movements with both hands contributed to the improvement of spatially coupled motion. Thus, the aim of this study was to investigate the effects of an asymmetric training program using virtual reality reflection equipment on upper limb function in stroke patients. Twenty-four stroke patients were randomly allocated to an experimental group (n=12) or a control group (n=12). Both groups participated in conventional physical therapy for 2×30 min/d, 5 d/wk, for 4 weeks. The experimental group also participated in an asymmetric training program using virtual reality reflection equipment, and the control group participated in a symmetric training program. Both asymmetric and symmetric programs were conducted for 30 min/d, 5 d/wk, for 4 weeks. To compare upper limb function before and after intervention, the Fugl-Meyer Assessment (FMA), the Box and Block Test (BBT), grip strength, range of motion (ROM), and spasticity were assessed. Both groups showed significant increases in upper limb function, excepting spasticity, after intervention (P<.05, 1-way repeated-measures analysis of variance [ANOVA]). A significant group-time interaction was demonstrated only for shoulder/elbow/wrist items of FMA, BBT, grip strength, and ROM of wrist flexion, extension, and ulnar deviation (P<.05, 2-way repeated-measures ANOVA). This study confirms that the asymmetric training program using virtual reality reflection equipment is an effective intervention method for improving upper limb function in stroke patients. We consider that an additional study based on a program using virtual reflection, which is more functional than performing simple tasks, and consisting of tasks relevant to the activities of daily living be conducted. Copyright © 2014 National Stroke Association. Published by Elsevier Inc. All rights reserved.

  4. The effectiveness of the COPE healthy lifestyles TEEN program: a school-based intervention in middle school adolescents with 12-month follow-up.

    PubMed

    Ardic, Aysun; Erdogan, Semra

    2017-06-01

    The goal of this study is to assess the applicability and long-term effectiveness of the T-COPE Healthy TEEN program on adolescent health. Obesity and mental health disorders are major public health problems in adolescents. In this context, including long-term and multiple behavioural obesity prevention programs are becoming increasingly important. A quasi-experimental design with pre-test/post-test control group and repeated measurements. Eighty-seven (45 in intervention group, 42 in control group) adolescents were included from two different middle schools in the intervention program. The data were analysed by using descriptive statistics, Pearson chi-square, Fisher's exact test, Student-t test, repeated measures of variance analysis and Cohen's d effect size. No significant difference was found between the intervention and control groups in terms of descriptive characteristics, behavioural and cognitive variables of the adolescents. Following the intervention, the adolescents in intervention groups showed improvements in nutritional behaviour, physical activity and stress management. These improvements concerned increased physical walking measured in the number of physical steps per week daily fruit and vegetable consumption and the daily quantity of water ingested. While their nutrition/physical activity knowledge significantly increased, their weight and anxiety symptoms significantly decreased. The effect of the program on body mass index, depression and health beliefs of the adolescents were not significant compared with the control group. The applicability of the T-COPE Healthy TEEN program on Turkish adolescents and its effectiveness on their health behaviours, nutrition and physical activity knowledge and stress management were revealed in this study. © 2016 John Wiley & Sons Ltd.

  5. OGO program summary, supplement 1. [updated bibliography for all OGO missions and scientific results from OGO 5 and 6 missions

    NASA Technical Reports Server (NTRS)

    Jackson, J. E.

    1978-01-01

    Scientific results from OGO-5 and OGO-6 experiments are summarized and approximately 200 citations are included to update the 1975 OGO bibliography. Personal author, subject, and corporate source indexes are included. The supplement follows the same format as that of the OGO Program Summary; it does not repeat the finalized information in the original publication, which should be consulted for indexes of experiments, experimenters, institutions, and the glossary of abbreviations and acronyms.

  6. History repeats itself in Japan: Failure to learn from rubella epidemic leads to failure to provide the HPV vaccine.

    PubMed

    Tanaka, Yusuke; Ueda, Yutaka; Yoshino, Kiyoshi; Kimura, Tadashi

    2017-08-03

    Eradication of vaccine-preventable diseases is one of the most important goals of public health interventions. Herd immunity can be established by national vaccination programs. However, once the national vaccination program stops for any reason, unprotected group will be generated depending on an unfortunate year of birth. Currently, there are 2 major concerns regarding vaccine cohort gaps in Japan: one is for the rubella vaccine, the other for the human papillomavirus (HPV) vaccine.

  7. Federal and State Responses to the Emergency Response Communications Program. Draft Report, March 1979.

    DTIC Science & Technology

    1979-06-01

    expansion of terrestrial system meets all planned needs i Department of Housing Under review and Urban Development Department of Interior No baseline...be a suitable addition to table 1.1. SI The cost and available federal support will be important to P the states and will have an effect on our total...Repeater ə Jsystems to expand the system coverage. The attached map shows the existing program and future expansion . II, TECHNICAL DESCRIPTION - i |A

  8. Does trampoline or hard surface jumping influence lower extremity alignment?

    PubMed

    Akasaka, Kiyokazu; Tamura, Akihiro; Katsuta, Aoi; Sagawa, Ayako; Otsudo, Takahiro; Okubo, Yu; Sawada, Yutaka; Hall, Toby

    2017-12-01

    [Purpose] To determine whether repetitive trampoline or hard surface jumping affects lower extremity alignment on jump landing. [Subjects and Methods] Twenty healthy females participated in this study. All subjects performed a drop vertical jump before and after repeated maximum effort trampoline or hard surface jumping. A three-dimensional motion analysis system and two force plates were used to record lower extremity angles, moments, and vertical ground reaction force during drop vertical jumps. [Results] Knee extensor moment after trampoline jumping was greater than that after hard surface jumping. There were no significant differences between trials in vertical ground reaction force and lower extremity joint angles following each form of exercise. Repeated jumping on a trampoline increased peak vertical ground reaction force, hip extensor, knee extensor moments, and hip adduction angle, while decreasing hip flexion angle during drop vertical jumps. In contrast, repeated jumping on a hard surface increased peak vertical ground reaction force, ankle dorsiflexion angle, and hip extensor moment during drop vertical jumps. [Conclusion] Repeated jumping on the trampoline compared to jumping on a hard surface has different effects on lower limb kinetics and kinematics. Knowledge of these effects may be useful in designing exercise programs for different clinical presentations.

  9. Does trampoline or hard surface jumping influence lower extremity alignment?

    PubMed Central

    Akasaka, Kiyokazu; Tamura, Akihiro; Katsuta, Aoi; Sagawa, Ayako; Otsudo, Takahiro; Okubo, Yu; Sawada, Yutaka; Hall, Toby

    2017-01-01

    [Purpose] To determine whether repetitive trampoline or hard surface jumping affects lower extremity alignment on jump landing. [Subjects and Methods] Twenty healthy females participated in this study. All subjects performed a drop vertical jump before and after repeated maximum effort trampoline or hard surface jumping. A three-dimensional motion analysis system and two force plates were used to record lower extremity angles, moments, and vertical ground reaction force during drop vertical jumps. [Results] Knee extensor moment after trampoline jumping was greater than that after hard surface jumping. There were no significant differences between trials in vertical ground reaction force and lower extremity joint angles following each form of exercise. Repeated jumping on a trampoline increased peak vertical ground reaction force, hip extensor, knee extensor moments, and hip adduction angle, while decreasing hip flexion angle during drop vertical jumps. In contrast, repeated jumping on a hard surface increased peak vertical ground reaction force, ankle dorsiflexion angle, and hip extensor moment during drop vertical jumps. [Conclusion] Repeated jumping on the trampoline compared to jumping on a hard surface has different effects on lower limb kinetics and kinematics. Knowledge of these effects may be useful in designing exercise programs for different clinical presentations. PMID:29643592

  10. A cost-effective weight loss program at the worksite.

    PubMed

    Seidman, L S; Sevelius, G G; Ewald, P

    1984-10-01

    A major focus of Lockheed Missiles and Space Company's wellness program (Sunnyvale, Calif.) was to motivate weight loss in a cost-effective manner. The educationally based "Take It Off '83" campaign was created using the concepts of competition and self-responsibility. Seventy percent of the initial 2,499 participants completed the program, and 90% of these lost weight. Program completion rates and weight lost were higher for men than for women and higher for those who participated as team members rather than as individuals. Encouraging the formation of supportive/competitive teams proved to be a very effective means of promoting weight loss. The cost-effective motivation of weight loss in an industrial setting was accomplished successfully through this program (the cost to the company per initial participant was +5.40). Because of these results, the program will be repeated annually.

  11. Jamie's Ministry of Food: quasi-experimental evaluation of immediate and sustained impacts of a cooking skills program in Australia.

    PubMed

    Flego, Anna; Herbert, Jessica; Waters, Elizabeth; Gibbs, Lisa; Swinburn, Boyd; Reynolds, John; Moodie, Marj

    2014-01-01

    To evaluate the immediate and sustained effectiveness of the first Jamie's Ministry of Food Program in Australia on individuals' cooking confidence and positive cooking/eating behaviours. A quasi- experimental repeated measures design was used incorporating a wait-list control group. A questionnaire was developed and administered at baseline (T1), immediately post program (T2) and 6 months post completion (T3) for participants allocated to the intervention group, while wait -list controls completed it 10 weeks prior to program commencement (T1) and just before program commencement (T2). The questionnaire measured: participants' confidence to cook, the frequency of cooking from basic ingredients, and consumption of vegetables, vegetables with the main meal, fruit, ready-made meals and takeaway. Analysis used a linear mixed model approach for repeated measures using all available data to determine mean differences within and between groups over time. All adult participants (≥18 years) who registered and subsequently participated in the program in Ipswich, Queensland, between late November 2011- December 2013, were invited to participate. In the intervention group: 694 completed T1, 383 completed T1 and T2 and 214 completed T1, T2 and T3 assessments. In the wait-list group: 237 completed T1 and 149 completed T1 and T2 assessments. Statistically significant increases within the intervention group (P<0.001) and significant group*time interaction effects (P<0.001) were found in all cooking confidence measures between T1 and T2 as well as cooking from basic ingredients, frequency of eating vegetables with the main meal and daily vegetable intake (0.52 serves/day increase). Statistically significant increases at T2 were sustained at 6 months post program in the intervention group. Jamie's Ministry of Food Program, Australia improved individuals' cooking confidence and cooking/eating behaviours contributing to a healthier diet and is a promising community-based strategy to influence diet quality.

  12. Jamie's Ministry of Food: Quasi-Experimental Evaluation of Immediate and Sustained Impacts of a Cooking Skills Program in Australia

    PubMed Central

    Flego, Anna; Herbert, Jessica; Waters, Elizabeth; Gibbs, Lisa; Swinburn, Boyd; Reynolds, John; Moodie, Marj

    2014-01-01

    Objective To evaluate the immediate and sustained effectiveness of the first Jamie's Ministry of Food Program in Australia on individuals' cooking confidence and positive cooking/eating behaviours. Methods A quasi- experimental repeated measures design was used incorporating a wait-list control group. A questionnaire was developed and administered at baseline (T1), immediately post program (T2) and 6 months post completion (T3) for participants allocated to the intervention group, while wait -list controls completed it 10 weeks prior to program commencement (T1) and just before program commencement (T2). The questionnaire measured: participants' confidence to cook, the frequency of cooking from basic ingredients, and consumption of vegetables, vegetables with the main meal, fruit, ready-made meals and takeaway. Analysis used a linear mixed model approach for repeated measures using all available data to determine mean differences within and between groups over time. Subjects All adult participants (≥18 years) who registered and subsequently participated in the program in Ipswich, Queensland, between late November 2011- December 2013, were invited to participate. Results In the intervention group: 694 completed T1, 383 completed T1 and T2 and 214 completed T1, T2 and T3 assessments. In the wait-list group: 237 completed T1 and 149 completed T1 and T2 assessments. Statistically significant increases within the intervention group (P<0.001) and significant group*time interaction effects (P<0.001) were found in all cooking confidence measures between T1 and T2 as well as cooking from basic ingredients, frequency of eating vegetables with the main meal and daily vegetable intake (0.52 serves/day increase). Statistically significant increases at T2 were sustained at 6 months post program in the intervention group. Conclusions Jamie's Ministry of Food Program, Australia improved individuals' cooking confidence and cooking/eating behaviours contributing to a healthier diet and is a promising community-based strategy to influence diet quality. PMID:25514531

  13. The effect of a supervised community-based exercise program on balance, balance confidence, and gait in individuals with lower limb amputation.

    PubMed

    Miller, Carol A; Williams, Jennifer E; Durham, Katey L; Hom, Selena C; Smith, Julie L

    2017-10-01

    Many individuals with lower limb loss report concern with walking ability after completing structured traditional rehabilitation. The purpose of this study was to explore the impact of a supervised community-based exercise program on balance, balance confidence, and gait in individuals with lower limb amputation. Repeated measures. The supervised exercise program was offered biweekly for 6 weeks. The GAITRite System by CIR Systems, Inc., the Figure-of-8 Walk Test, and Activity-specific Balance Confidence Scale were used to measure clinical outcomes pre- and post-intervention. In total, 16 participants with lower limb amputation (mean age: 50.8 years) completed the study. A multivariate, repeated measures analysis of variance indicated a statistically significant effect of training across six clinical outcome measures ( F(6, 10) = 4.514, p = .018). Moderate effect sizes were found for the Figure-of-8 Walk Test ( η 2 = .586), Activity-specific Balance Confidence Scale ( η 2 = .504), and gait velocity at comfortable walking speed ( η 2 = .574). The average increase in gait speed was clinically meaningful at .14 m/s. The supervised community-based exercise program implemented in this study was designed to address specific functional needs for individuals with lower limb loss. Each participant experienced clinically meaningful improvements in balance, balance confidence, and walking ability. Clinical relevance The provision of a supervised community-based exercise program, after traditional rehabilitation, provides opportunity to offer a continuum of care that may enhance prosthetic functional ability and active participation in the community for individuals with lower limb amputation.

  14. Relative Effectiveness of Reading Intervention Programs for Adults with Low Literacy.

    PubMed

    Sabatini, John P; Shore, Jane; Holtzman, Steven; Scarborough, Hollis S

    2011-01-01

    To compare the efficacy of instructional programs for adult learners with basic reading skills below the seventh grade level, 300 adults were randomly assigned to one of three supplementary tutoring programs designed to strengthen decoding and fluency skills, and gains were examined for the 148 adult students who completed the program. The three intervention programs were based on or adapted from instructional programs that have been shown to benefit children with reading levels similar to those of the adult sample. Each program varied in its relative emphasis on basic decoding versus reading fluency instruction. A repeated measures MANOVA confirmed small to moderate reading gains from pre- to post-testing across a battery of targeted reading measures, but no significant relative differences across interventions. An additional 152 participants who failed to complete the intervention differed initially from those who persisted. Implications for future research and adult literacy instruction are discussed.

  15. [Effects of Breastfeeding Empowerment Program on Breastfeeding Self-efficacy, Adaptation and Continuation in Primiparous Women].

    PubMed

    Song, Seon Mi; Park, Mi Kyung

    2016-06-01

    The purpose of this study was to develop a breastfeeding empowerment program and to investigate the effects of the breastfeeding empowerment program on self-efficacy, adaptation and continuation of breastfeeding for primiparous women. The 5 session breastfeeding empowerment program was developed and a non-equivalent control group non-synchronized quasi-experiment design was used. Fifty-five participants were assigned to either the experimental group (n=27) or the control group (n=28). Effects were tested using repeated measures ANOVA and χ²-test. Scores for self-efficacy, adaptation and continuation of breastfeeding of in the experimental group after program were significantly higher than 1 week, 4 weeks, 8 weeks scores in control group. The effects of the breastfeeding empowerment program for elevating self-efficacy, adaptation and continuation of breastfeeding in primiparous women were validated. Therefore, this program can be recommended for vigorous use in clinical practice.

  16. Preventing Occupational Skin Disease: A Review of Training Programs.

    PubMed

    Zack, Bethany; Arrandale, Victoria H; Holness, D Linn

    Occupational contact dermatitis (OCD) is a common occupational disease that impacts a variety of worker groups. Skin protection and disease prevention training programs have shown promise for improving prevention practices and reducing the incidence of OCD. This review details the features of training programs for primary prevention of OCD and identifies gaps in the literature. Twelve studies were identified for in-depth review: many studies included wet workers employed in health care, hairdressing, cleaning, and food preparation; 1 program featured manufacturing workers. Few programs provided content on allergic contact dermatitis, and only 1 was evaluated for long-term effectiveness. Effective programs were similar in content, delivery method, and timing and were characterized by industry specificity, multimodal learning, participatory elements, skin care resource provision, repeated sessions, and management engagement. Long-term effectiveness, generalizability beyond OCD, workplace health and safety culture impact, and translation of programs in the North American context represent areas for future research.

  17. Evaluation of an employer-sponsored pedometer-based physical activity program.

    PubMed

    Behrens, Timothy K; Domina, Lorie; Fletcher, Gena M

    2007-12-01

    This study evaluated a competition-based employer-sponsored physical activity program using pedometers. City employees (N approximately 2,600) formed teams in groups of 10 persons (N = 640). The groups competed against each other over a 12-wk. period with the goal of attaining 10,000 steps per day, per person. Only teams with complete data were included in the formal evaluation. A repeated-measures analysis of variance indicated significant differences in team steps by week of the program, with post hoc comparisons indicating significant differences from baseline step counts evident during Weeks 6-8 but not at the end of the program. These data confirm that competition-based physical activity programs using pedometers may not be an effective means of increasing the long-term physical activity of employees.

  18. Effects of a short-term coordination exercise program during school recess: agility of seven- to eight-year-old elementary school children.

    PubMed

    Yasumitsu, Tatsuo; Nogawa, Haruo

    2013-04-01

    This study tested the effect of a short-term coordination program focused on improving the agility of school children ages 7 to 8 years. Healthy Japanese children were placed in an experimental group of 26 children (10 girls, 16 boys) and a control group of 20 children (9 girls, 11 boys). The experimental group participated in 10 coordination program sessions during recesses; each session was performed 1 to 3 times per week, for 26 days. No differences were observed between the groups in repeated side-step scores prior to the program, although an interaction was observed after the completion of the treatment. The short-term coordination program was effective in increasing the agility of elementary school children aged 7 to 8 years.

  19. Modeling an integrative physical examination program for the Departments of Defense and Veterans Affairs.

    PubMed

    Goodrich, Scott G

    2006-10-01

    Current policies governing the Departments of Defense and Veterans Affairs physical examination programs are out of step with current evidence-based medical practice. Replacing periodic and other routine physical examination types with annual preventive health assessments would afford our service members additional health benefit at reduced cost. Additionally, the Departments of Defense and Veterans Affairs repeat the physical examination process at separation and have been unable to reconcile their respective disability evaluation systems to reduce duplication and waste. A clear, coherent, and coordinated strategy to improve the relevance and utility of our physical examination programs is long overdue. This article discusses existing physical examination programs and proposes a model for a new integrative physical examination program based on need, science, and common sense.

  20. Vital signs: Repeat births among teens - United States, 2007-2010.

    PubMed

    2013-04-05

    Teen childbearing has potential negative health, economic, and social consequences for mother and child. Repeat teen childbearing further constrains the mother's education and employment possibilities. Rates of preterm and low birth weight are higher in teens with a repeat birth, compared with first births. To assess patterns of repeat childbearing and postpartum contraceptive use among teens, CDC analyzed natality data from the National Vital Statistics System (NVSS) and the Pregnancy Risk Assessment Monitoring System (PRAMS) from 2007-2010. Based on 2010 NVSS data from all 50 states and the District of Columbia, of more than 367,000 births to teens aged 15-19 years, 18.3% were repeat births. The percentage of teen births that represented repeat births decreased by 6.2% between 2007 and 2010. Disparities in repeat teen births exist by race/ethnicity, with the highest percentages found among American Indian/Alaska Natives (21.6%), Hispanics (20.9%), and non-Hispanic blacks (20.4%) and lowest among non-Hispanic whites (14.8%). Wide geographic disparities in the percentage of teen births that were repeat births also exist, ranging from 22% in Texas to 10% in New Hampshire. PRAMS data from 16 reporting areas (15 states and New York City) indicate that 91.2% of teen mothers used a contraceptive method 2-6 months after giving birth, but only 22.4% of teen mothers used the most effective methods. Teens with a previous live birth were significantly more likely to use the most effective methods postpartum compared with those with no prior live birth (29.6% versus 20.9%, respectively). Non-Hispanic white and Hispanic teens were significantly more likely to use the most effective methods than non-Hispanic black teens (24.6% and 27.9% versus 14.3%, respectively). The percentage of teens reporting postpartum use of the most effective methods varied greatly geographically across the PRAMS reporting areas, ranging from 50.3% in Colorado to 7.2% in New York State. Although the prevalence of repeat teen birth has declined in recent years, nearly one in five teen births is a repeat birth. Large disparities exist in repeat teen births and use of the most effective contraceptive methods postpartum, which was reported by fewer than one out of four teen mothers. Evidence-based approaches are needed to reduce repeat teen childbearing. These include linking pregnant and parenting teens to home visiting and similar programs that address a broad range of needs, and offering postpartum contraception to teens, including long-acting methods of reversible contraception.

  1. Comparison of Pictorial Techniques for Guiding Performance During Training.

    ERIC Educational Resources Information Center

    Miller, Elmo E.

    An experimental program was conducted to develop effective methods for producing and utilizing filmed demonstrations and instructional manuals. Four variations on conventional filmed demonstrations were evaluated: 1) revising an Army film through repeated tryouts with novices, 2) stopping the projector after each step is demonstrated to allow…

  2. Read Naturally. Revised. What Works Clearinghouse Intervention Report

    ERIC Educational Resources Information Center

    What Works Clearinghouse, 2007

    2007-01-01

    "Read Naturally" is designed to improve reading fluency using a combination of books, audio-tapes, and computer software. This program includes three main strategies: repeated reading of English text for oral reading fluency development, teacher modeling of story reading, and systematic monitoring of student progress by teachers.…

  3. Read Naturally. What Works Clearinghouse Intervention Report

    ERIC Educational Resources Information Center

    What Works Clearinghouse, 2006

    2006-01-01

    "Read Naturally" is designed to improve reading fluency using a combination of books, audio-tapes, and computer software. This program includes three main strategies: (1) repeated reading of English text for oral reading fluency development; (2) teacher modeling of story reading; and (3) systematic monitoring of student progress by…

  4. An Evaluation of Nutrition Education Program for Low-Income Youth

    ERIC Educational Resources Information Center

    Kemirembe, Olive M. K.; Radhakrishna, Rama B.; Gurgevich, Elise; Yoder, Edgar P.; Ingram, Patreese D.

    2011-01-01

    A quasi-experimental design consisting of pretest, posttest, and delayed posttest comparison control group was used. Nutrition knowledge and behaviors were measured at pretest (time 1) posttest (time 2) and delayed posttest (time 3). General Linear Model (GLM) repeated measure ANCOVA results showed that youth who received nutrition education…

  5. Increasing Math Achievement through Use of Music.

    ERIC Educational Resources Information Center

    Bryant-Jones, Marian; Shimmins, Kymberley J.; Vega, Jill D.

    This report describes a program for increasing math achievement through the use of musical interventions including repeated exposure to Mozart classical music and School House Rock, and introduction to teacher-made songs that introduce mathematical concepts in the music classroom. The students of the targeted second and fourth grade classes…

  6. Exploring Reference Group Effects on Teachers' Nominations of Gifted Students

    ERIC Educational Resources Information Center

    Rothenbusch, Sandra; Zettler, Ingo; Voss, Thamar; Lösch, Thomas; Trautwein, Ulrich

    2016-01-01

    Teachers are often asked to nominate students for enrichment programs for gifted children, and studies have repeatedly indicated that students' intelligence is related to their likelihood of being nominated as gifted. However, it is unknown whether class-average levels of intelligence influence teachers' nominations as suggested by theory--and…

  7. Effects of Functional Mobility Skills Training for Adults with Severe Multiple Disabilities

    ERIC Educational Resources Information Center

    Whinnery, Stacie B.; Whinnery, Keith W.

    2011-01-01

    This study investigated the effects of a functional mobility program on the functional standing and walking skills of five adults with developmental disabilities. The Mobility Opportunities Via Education (MOVE) Curriculum was implemented using a multiple-baseline across subjects design. Repeated measures were taken during baseline, intervention…

  8. 40 CFR 264.99 - Compliance monitoring program.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... the availability of laboratory facilities to perform the analysis of ground-water samples. (e) The... Administrator, and repeat the analysis. If the second analysis confirms the presence of new constituents, the... Administrator within seven days after the completion of the second analysis and add them to the monitoring list...

  9. Object-Oriented Algorithm For Evaluation Of Fault Trees

    NASA Technical Reports Server (NTRS)

    Patterson-Hine, F. A.; Koen, B. V.

    1992-01-01

    Algorithm for direct evaluation of fault trees incorporates techniques of object-oriented programming. Reduces number of calls needed to solve trees with repeated events. Provides significantly improved software environment for such computations as quantitative analyses of safety and reliability of complicated systems of equipment (e.g., spacecraft or factories).

  10. The Seven Deadly Sins of Public Outreach Programs.

    ERIC Educational Resources Information Center

    Miller, Kivi Leroux

    2003-01-01

    Lists seven approaches not to take when developing a public outreach campaign on recycling. Methods include: (1) environmental education will increase participation; (2) everyone cares about recycling; (3) guilt works; (4) keep repeating the same ads; (5) non-English speakers need translated literature; (6) scheduling workshops; and (7) kids will…

  11. An Intervention to Improve Motivation for Homework

    ERIC Educational Resources Information Center

    Akioka, Elisabeth; Gilmore, Linda

    2013-01-01

    A repeated measures design, with randomly assigned intervention and control groups and multiple sources of information on each participant, was used to examine whether changing the method of delivery of a school's homework program in order to better meet the students' needs for autonomy, relatedness and competence would lead to more positive…

  12. Evaluation of the base/subgrade soil under repeated loading : phase I--laboratory testing and numerical modeling of geogrid reinforced bases in flexible pavement.

    DOT National Transportation Integrated Search

    2009-10-01

    This report documents the results of a study that was conducted to characterize the behavior of geogrid reinforced base : course materials. The research was conducted through an experimental testing and numerical modeling programs. The : experimental...

  13. Behavioral Problems in the Classroom and Underlying Language Difficulties

    ERIC Educational Resources Information Center

    Tommerdahl, Jodi; Semingson, Peggy

    2013-01-01

    Dealing with the behavioral problems of students is one of many dimensions of most educators' and schools' requirements. While research has repeatedly shown that a large number of children with behavior problems have underlying, unrecognized language difficulties, few schools have implemented programs where children with problem behavior are…

  14. Childhood Lead Poisoning: Blueprint for Prevention.

    ERIC Educational Resources Information Center

    Rochow, K. W. James; Rapuano, Maria

    Current programs to deal with childhood lead poisoning, the primary environmental disease of U.S. children, screen individual children, treat those with serious cases of lead poisoning, and subsequently return children to hazardous environments. This approach has led to repeated diagnoses of lead poisoning. This handbook is designed to convince…

  15. Flowtables: Program Skeletal Inversion for Defeat of Interprocedural Analysis with Unique Metamorphism

    DTIC Science & Technology

    2015-08-28

    use is granted without fee provided that copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the...Hulin, T. Leek, and R. Whelan. Repeatable reverse engineering for the greater good with panda . Technical report, Columbia University, 2014. https

  16. The Melding of Literacy Strategies to Enhance Reading Fluency, Comprehension, and Enjoyment

    ERIC Educational Resources Information Center

    Weih, Timothy G.

    2013-01-01

    This report describes an individualized literacy intervention program that was developed for a fifth grade boy who struggled with reading. Based upon informal assessment and evaluation procedures, the following literacy strategies were taught within a one-to-one instructional setting: Repeated Readings, Personal Vocabulary Journal, Phonemic…

  17. Coherence Properties of Strongly Interacting Atomic Vapors in Waveguides

    DTIC Science & Technology

    2011-12-31

    lattice in the mean-field regime [22]. There the goal was to repeat, for our system, the Chirikiov-lzrailev program for Fermi- Pasta -Ulam chain and...define a typical deviation from ergodicity), we introduce a geometric structure— based on the Frobenius or Hilbert-Schmidt inner product—to the space of

  18. Teachers' Personal Agency: Making Sense of Slope through Additive Structures

    ERIC Educational Resources Information Center

    Walter, Janet G.; Gerson, Hope

    2007-01-01

    In the context of a three-year professional development program in mathematics, practicing elementary teachers persistently engaged in collaborative inquiry and reflection to build connected meanings for slope. One teacher invented a compelling representation for slope as a process of repeated addition, using Cuisenaire rods, based on teachers'…

  19. PESTICIDE EXPOSURE AND POTENTIAL HEALTH EFFECTS IN YOUNG CHILDREN ALONG THE U.S. - MEXICO BORDER

    EPA Science Inventory

    The purpose of the Pesticides in Young Children - Border States Program is to assess the relationship between health status in children living along the United States and Mexico border and repeated pesticide exposures via multiple sources and pathways. Children's health has bee...

  20. Response of invasive swallow-worts (Vincetoxicum spp.) to repeated artificial defoliation or clipping

    USDA-ARS?s Scientific Manuscript database

    The Eurasian vines pale swallow-wort (Vincetoxicum rossicum) (PSW) and black swallow-wort (V. nigrum) (BSW) are invasive perennials that have infested natural areas in the northeastern United States and southern Canada. A biological control program is being developed, though it is unclear how thes...

  1. Sequence analysis reveals genomic factors affecting EST-SSR primer performance and polymorphism

    USDA-ARS?s Scientific Manuscript database

    Search for simple sequence repeat (SSR) motifs and design of flanking primers in expressed sequence tag (EST) sequences can be easily done at a large scale using bioinformatics programs. However, failed amplification and/or detection, along with lack of polymorphism, is often seen among randomly sel...

  2. A space-efficient algorithm for local similarities.

    PubMed

    Huang, X Q; Hardison, R C; Miller, W

    1990-10-01

    Existing dynamic-programming algorithms for identifying similar regions of two sequences require time and space proportional to the product of the sequence lengths. Often this space requirement is more limiting than the time requirement. We describe a dynamic-programming local-similarity algorithm that needs only space proportional to the sum of the sequence lengths. The method can also find repeats within a single long sequence. To illustrate the algorithm's potential, we discuss comparison of a 73,360 nucleotide sequence containing the human beta-like globin gene cluster and a corresponding 44,594 nucleotide sequence for rabbit, a problem well beyond the capabilities of other dynamic-programming software.

  3. CET93 and CETPC: An interim updated version of the NASA Lewis computer program for calculating complex chemical equilibria with applications

    NASA Technical Reports Server (NTRS)

    Mcbride, Bonnie J.; Reno, Martin A.; Gordon, Sanford

    1994-01-01

    The NASA Lewis chemical equilibrium program with applications continues to be improved and updated. The latest version is CET93. This code, with smaller arrays, has been compiled for use on an IBM or IBM-compatible personal computer and is called CETPC. This report is intended to be primarily a users manual for CET93 and CETPC. It does not repeat the more complete documentation of earlier reports on the equilibrium program. Most of the discussion covers input and output files, two new options (ONLY and comments), example problems, and implementation of CETPC.

  4. Learning to pass: sex offenders' strategies for establishing a viable identity in the prison general population.

    PubMed

    Schwaebe, Charles

    2005-12-01

    This article endeavors to illustrate the realities of prison life for sex offenders and the means by which they attempt to establish viable identities and acquire a survivable niche in the prison general population, particularly when established identities and protective niches are put at risk by entry into a sex offender treatment program. Qualitative data was collected by repeatedly interviewing a cohort of sex offenders for 6 months as they completed a basic sex offender treatment program. The findings indicate a need to include consideration of treatment context in understanding the limits of treatment gain in prison-based programs.

  5. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Humphrey, Betty; Bland, Jesse John

    This paper documents the history of the TRU program at Sandia, previous and current activities associated with TRU material and waste, interfaces with other TRU waste generator sites and the Waste Isolation Pilot Plan (WIPP), and paths forward for TRU material and waste. This document is a snapshot in time of the TRU program and should be updated as necessary, or when significant changes have occurred in the Sandia TRU program or in the TRU regulatory environment. This paper should serve as a roadmap to capture past TRU work so that efforts are not repeated and ground is not lostmore » due to future inactivity and personnel changes.« less

  6. Development and Characterization of a Low-Pressure Calibration System for Hypersonic Wind Tunnels

    NASA Technical Reports Server (NTRS)

    Green, Del L.; Everhart, Joel L.; Rhode, Matthew N.

    2004-01-01

    Minimization of uncertainty is essential for accurate ESP measurements at very low free-stream static pressures found in hypersonic wind tunnels. Statistical characterization of environmental error sources requires a well defined and controlled calibration method. A calibration system has been constructed and environmental control software developed to control experimentation to eliminate human induced error sources. The initial stability study of the calibration system shows a high degree of measurement accuracy and precision in temperature and pressure control. Control manometer drift and reference pressure instabilities induce uncertainty into the repeatability of voltage responses measured from the PSI System 8400 between calibrations. Methods of improving repeatability are possible through software programming and further experimentation.

  7. Very Low Thrust Gaseous Oxygen-hydrogen Rocket Engine Ignition Technology

    NASA Technical Reports Server (NTRS)

    Bjorklund, Roy A.

    1983-01-01

    An experimental program was performed to determine the minimum energy per spark for reliable and repeatable ignition of gaseous oxygen (GO2) and gaseous hydrogen (GH2) in very low thrust 0.44 to 2.22-N (0.10 to 0.50-lb sub f) rocket engines or spacecraft and satellite attitude control systems (ACS) application. Initially, the testing was conducted at ambient conditions, with the results subsequently verified under vacuum conditions. An experimental breadboard electrical exciter that delivered 0.2 to 0.3 mj per spark was developed and demonstrated by repeated ignitions of a 2.22-N (0.50-lb sub f) thruster in a vacuum chamber with test durations up to 30 min.

  8. Summary of Altitude Pulse Testing of a 100-lbf L02/LCH4 Reaction Control Engine

    NASA Technical Reports Server (NTRS)

    Marshall, William M.; Kleinhenz, Julie E.

    2011-01-01

    Recently, liquid oxygen-liquid methane (LO2/LCH4) has been considered as a potential "green" propellant alternative for future exploration missions. The Propulsion and Cryogenic Advanced Development (PCAD) project has been tasked by NASA to develop this propulsion combination to enable safe and cost effective exploration missions. To date, limited experience with such combinations exist, and as a result a comprehensive test program is critical to demonstrating the viability of implementing such a system. The NASA Glenn Research Center has conducted a test program of a 100-lbf (445-N) reaction control engine (RCE) at the center s Altitude Combustion Stand (ACS), focusing on altitude testing over a wide variety of operational conditions. The ACS facility includes a unique propellant conditioning feed system (PCFS) which allows precise control of propellant inlet conditions to the engine. Engine performance as a result of these inlet conditions was examined extensively during the test program. This paper is a companion to the previous specific impulse testing paper, and discusses the pulsed mode operation portion of testing, with a focus on minimum impulse bit (I-bit) and repeatable pulse performance. The engine successfully demonstrated target minimum impulse bit performance at all conditions, as well as successful demonstration of repeatable pulse widths. Some anomalous conditions experienced during testing are also discussed, including a double pulse phenomenon which was not noted in previous test programs for this engine.

  9. uSIMPK. An Excel for Windows-based simulation program for instruction of basic pharmacokinetics principles to pharmacy students.

    PubMed

    Brocks, Dion R

    2015-07-01

    Pharmacokinetics can be a challenging topic to teach due to the complex relationships inherent between physiological parameters, mathematical descriptors and equations, and their combined impact on shaping the blood fluid concentration vs. time curves of drugs. A computer program was developed within Microsoft Excel for Windows, designed to assist in the instruction of basic pharmacokinetics within an entry-to-practice pharmacy class environment. The program is composed of a series of spreadsheets (modules) linked by Visual Basic for Applications, intended to illustrate the relationships between pharmacokinetic and in some cases physiological parameters, doses and dose rates and the drug blood fluid concentration vs. time curves. Each module is accompanied by a simulation user's guide, prompting the user to change specific independent parameters and then observe the impact of the change(s) on the drug concentration vs. time curve and on other dependent parameters. "Slider" (or "scroll") bars can be selected to readily see the effects of repeated changes on the dependencies. Topics covered include one compartment single dose administration (iv bolus, oral, short infusion), intravenous infusion, repeated doses, renal and hepatic clearance, nonlinear elimination, two compartment model, plasma protein binding and the relationship between pharmacokinetics and drug effect. The program has been used in various forms in the classroom over a number of years, with positive ratings generally being received from students for its use in the classroom. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

  10. Northern Alberta remote teleglaucoma program: clinical outcomes and patient disposition.

    PubMed

    Verma, Sanam; Arora, Sourabh; Kassam, Faazil; Edwards, Marianne C; Damji, Karim F

    2014-04-01

    To review the diagnostic outcomes and clinical referral pathways of patients assessed and managed through a collaborative care patient-centred teleglaucoma program. Retrospective cohort study. Eligible patients were those assessed by the referring optometrist or ophthalmologist to be open-angle glaucoma suspects or to have definite early open-angle glaucoma. A glaucoma specialist graded each case through virtual consultation. Clinical referral pathways were noted: in-person consultation with glaucoma specialist, repeat teleconsultation, collaborative glaucoma management with optometrist, or referral for nonglaucomatous ophthalmic pathology. A total of 247 patients were referred to the program from 2008 to 2012. Of all teleconsults, 31.1% were diagnosed with glaucoma, 42.1% were suspects, and 26.7% were unaffected. Of all patients, 27% were referred for in-person glaucoma evaluation; 69% of patients could be managed by their referring optometrist, with 48% of patients requiring repeat teleconsultation. Treatment was initiated before being seen for 87% of patients with definite glaucoma and 28% of glaucoma suspects. Of all patients seen through the remote teleglaucoma program, most did not require an in-person consultation with an ophthalmologist and could be managed through distance collaboration. For the approximately one third who were diagnosed with glaucoma based on virtual assessment, medication was started in the majority of cases and in-person consultation was arranged. Further studies to validate and consider cost-effectiveness of this system are under way. © 2013 Canadian Ophthalmological Society Published by Canadian Ophthalmological Society All rights reserved.

  11. EnviroAtlas - 303(d) Impairments by 12-digit HUC for the Conterminous United States

    EPA Pesticide Factsheets

    This EnviroAtlas dataset depicts the total length of stream or river flowlines that have impairments submitted to the EPA by states under section 303(d) of the Clean Water Act. It also contains the total lengths of streams, rivers, and canals, total waterbody area, and stream density (stream length per area) from the US Geological Survey's high-resolution National Hydrography Dataset (NHD).This dataset was produced by the US EPA to support research and online mapping activities related to EnviroAtlas. EnviroAtlas (https://www.epa.gov/enviroatlas) allows the user to interact with a web-based, easy-to-use, mapping application to view and analyze multiple ecosystem services for the contiguous United States. The dataset is available as downloadable data (https://edg.epa.gov/data/Public/ORD/EnviroAtlas) or as an EnviroAtlas map service. Additional descriptive information about each attribute in this dataset can be found in its associated EnviroAtlas Fact Sheet (https://www.epa.gov/enviroatlas/enviroatlas-fact-sheets).

  12. Changes in wintertime pH and hydrography of the Gulf of Finland (Baltic Sea) with focus on depth layers.

    PubMed

    Almén, Anna-Karin; Glippa, Olivier; Pettersson, Heidi; Alenius, Pekka; Engström-Öst, Jonna

    2017-04-01

    We studied changes in sea water pH, temperature and salinity with focus on two depth layers, along the Gulf of Finland (the Baltic Sea) using long-term monitoring data from 1979 to 2015. Data from the most frequently sampled monitoring stations between western and eastern Gulf of Finland were used. The main result of the study reveals that pH has decreased both in surface and deep-water in the western Gulf of Finland with values ranging between -0.005 and -0.008 units year -1 . We also demonstrate a rise in temperature (~2 °C) and decrease in salinity (~-0.7 g kg -1 ) at several stations over the last 36 years. In general, the changes are shown to be more pronounced in the western part of the gulf. This paper also stresses the importance of improving the sampling frequency and quality of monitoring measurements.

  13. Observations of a diapycnal shortcut to adiabatic upwelling of Antarctic Circumpolar Deep Water

    NASA Astrophysics Data System (ADS)

    Silvester, J. Mead; Lenn, Yueng-Djern; Polton, Jeff A.; Rippeth, Tom P.; Maqueda, M. Morales

    2014-11-01

    In the Southern Ocean, small-scale turbulence causes diapycnal mixing which influences important water mass transformations, in turn impacting large-scale ocean transports such as the Meridional Overturning Circulation (MOC), a key controller of Earth's climate. We present direct observations of mixing over the Antarctic continental slope between water masses that are part of the Southern Ocean MOC. A 12 h time series of microstructure turbulence measurements, hydrography, and velocity observations off Elephant Island, north of the Antarctic Peninsula, reveals two concurrent bursts of elevated dissipation of O(10-6) W kg-1, resulting in heat fluxes ˜10 times higher than basin-integrated Drake Passage estimates. This occurs across the boundary between adjacent adiabatic upwelling and downwelling overturning cells. Ray tracing to nearby topography shows mixing between 300 and 400 m is consistent with the breaking of locally generated internal tidal waves. Since similar conditions extend to much of the Antarctic continental slope where these water masses outcrop, diapycnal mixing may contribute significantly to upwelling.

  14. Web services in the U.S. geological survey streamstats web application

    USGS Publications Warehouse

    Guthrie, J.D.; Dartiguenave, C.; Ries, Kernell G.

    2009-01-01

    StreamStats is a U.S. Geological Survey Web-based GIS application developed as a tool for waterresources planning and management, engineering design, and other applications. StreamStats' primary functionality allows users to obtain drainage-basin boundaries, basin characteristics, and streamflow statistics for gaged and ungaged sites. Recently, Web services have been developed that provide the capability to remote users and applications to access comprehensive GIS tools that are available in StreamStats, including delineating drainage-basin boundaries, computing basin characteristics, estimating streamflow statistics for user-selected locations, and determining point features that coincide with a National Hydrography Dataset (NHD) reach address. For the state of Kentucky, a web service also has been developed that provides users the ability to estimate daily time series of drainage-basin average values of daily precipitation and temperature. The use of web services allows the user to take full advantage of the datasets and processes behind the Stream Stats application without having to develop and maintain them. ?? 2009 IEEE.

  15. Upwelling rebound, ephemeral secondary pycnoclines, and the creation of a near-bottom wave guide over the Monterey Bay continental shelf

    USGS Publications Warehouse

    Cheriton, Olivia M.; McPhee-Shaw, Erika E.; Storlazzi, Curt D.; Rosenberger, Kurt J.; Shaw, William J.; Raanan, Ben Y.

    2014-01-01

    Several sequential upwelling events were observed in fall 2012, using measurements from the outer half of the continental shelf in Monterey Bay, during which the infiltration of dense water onto the shelf created a secondary, near-bottom pycnocline. This deep pycnocline existed in concert with the near-surface pycnocline and enabled the propagation of near-bottom, cold, semidiurnal internal tidal bores, as well as energetic, high-frequency, nonlinear internal waves of elevation (IWOE). The IWOE occurred within 20 m of the bottom, had amplitudes of 8–24 m, periods of 6–45 min, and depth-integrated energy fluxes up to 200 W m−1. Iribarren numbers (<0.03) indicate that these IWOE were nonbreaking in this region of the shelf. These observations further demonstrate how regional upwelling dynamics and the resulting bulk, cross-margin hydrography is a first-order control on the ability of internal waves, at tidal and higher frequencies, to propagate through continental shelf waters.

  16. Relationship between the colored dissolved organic matter and dissolved organic carbon and the application on remote sensing in East China Sea

    NASA Astrophysics Data System (ADS)

    Qiong, Liu; Pan, Delu; Huang, Haiqing; Lu, Jianxin; Zhu, Qiankun

    2011-11-01

    A cruise was conducted in the East China Sea (ECS) in autumn 2010 to collect Dissolved Organic Carbon (DOC) and Colored Dissolved Organic Matter (CDOM) samples. The distribution of DOC mainly controlled by the hydrography since the relationship between DOC and salinity was significant in both East China Sea. The biological activity had a significant influence on the concentration of DOC with a close correlation between DOC and Chl a. The absorption coefficient of CDOM (a355) decreased with the salinity increasing in the shelf of East China Sea (R2=0.9045). CDOM and DOC were significantly correlated in ECS where DOC distribution was dominated largely by the Changjiang diluted water. Based on the relationship of CDOM and DOC, we estimated the DOC concentration of the surface in ECS from satellite-derived CDOM images. Some deviations induced by the biological effect and related marine DOC accumulations were discussed.

  17. West Hackberry Strategic Petroleum Reserve site brine-disposal monitoring, Year I report. Volume II. Physical and chemical oceanography. Final report

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    DeRouen, L.R.; Hann, R.W.; Casserly, D.M.

    1983-02-01

    This project centers around the Strategic Petroleum Site (SPR) known as the West Hackberry salt dome which is located in southwestern Louisiana, and which is designed to store 241 million barrels of crude oil. Oil storage caverns are formed by injecting water into salt deposits, and pumping out the resulting brine. Studies described in this report were designed as follow-on studies to three months of pre-discharge characterization work, and include data collected during the first year of brine leaching operations. The objectives were to: (1) characterize the environment in terms of physical, chemical and biological attributes; (2) determine if significantmore » adverse changes in ecosystem productivity and stability of the biological community are occurring as a result of brine discharge; and (3) determine the magnitude of any change observed. Contents of Volume II include: introduction; physical oceanography; estuarine hydrology and hydrography; analysis of discharge plume; and water and sediment quality.« less

  18. Review of edgematchimg procedures for digital cartographic data used in Geographic Information Systems (GIS)

    USGS Publications Warehouse

    Nebert, D.D.

    1989-01-01

    In the process of developing a continuous hydrographic data layer for water resources applications in the Pacific Northwest, map-edge discontinuities in the U.S. Geological Survey 1:100 ,000-scale digital data that required application of computer-assisted edgematching procedures were identified. The spatial data sets required by the project must have line features that match closely enough across map boundaries to ensure full line topology when adjacent files are joined by the computer. Automated edgematching techniques are evaluated as to their effects on positional accuracy. Interactive methods such as selective node-matching and on-screen editing are also reviewed. Interactive procedures complement automated methods by allowing supervision of edgematching in a cartographic and hydrologic context. Common edge conditions encountered in the preparation of the Northwest Rivers data base are described, as are recommended processing solutions. Suggested edgematching procedures for 1:100,000-scale hydrography data are included in an appendix to encourage consistent processing of this theme on a national scale. (USGS)

  19. Watershed-based survey designs

    USGS Publications Warehouse

    Detenbeck, N.E.; Cincotta, D.; Denver, J.M.; Greenlee, S.K.; Olsen, A.R.; Pitchford, A.M.

    2005-01-01

    Watershed-based sampling design and assessment tools help serve the multiple goals for water quality monitoring required under the Clean Water Act, including assessment of regional conditions to meet Section 305(b), identification of impaired water bodies or watersheds to meet Section 303(d), and development of empirical relationships between causes or sources of impairment and biological responses. Creation of GIS databases for hydrography, hydrologically corrected digital elevation models, and hydrologic derivatives such as watershed boundaries and upstream–downstream topology of subcatchments would provide a consistent seamless nationwide framework for these designs. The elements of a watershed-based sample framework can be represented either as a continuous infinite set defined by points along a linear stream network, or as a discrete set of watershed polygons. Watershed-based designs can be developed with existing probabilistic survey methods, including the use of unequal probability weighting, stratification, and two-stage frames for sampling. Case studies for monitoring of Atlantic Coastal Plain streams, West Virginia wadeable streams, and coastal Oregon streams illustrate three different approaches for selecting sites for watershed-based survey designs.

  20. A case study of data integration for aquatic resources using semantic web technologies

    USGS Publications Warehouse

    Gordon, Janice M.; Chkhenkeli, Nina; Govoni, David L.; Lightsom, Frances L.; Ostroff, Andrea C.; Schweitzer, Peter N.; Thongsavanh, Phethala; Varanka, Dalia E.; Zednik, Stephan

    2015-01-01

    Use cases, information modeling, and linked data techniques are Semantic Web technologies used to develop a prototype system that integrates scientific observations from four independent USGS and cooperator data systems. The techniques were tested with a use case goal of creating a data set for use in exploring potential relationships among freshwater fish populations and environmental factors. The resulting prototype extracts data from the BioData Retrieval System, the Multistate Aquatic Resource Information System, the National Geochemical Survey, and the National Hydrography Dataset. A prototype user interface allows a scientist to select observations from these data systems and combine them into a single data set in RDF format that includes explicitly defined relationships and data definitions. The project was funded by the USGS Community for Data Integration and undertaken by the Community for Data Integration Semantic Web Working Group in order to demonstrate use of Semantic Web technologies by scientists. This allows scientists to simultaneously explore data that are available in multiple, disparate systems beyond those they traditionally have used.

  1. Partial polygon pruning of hydrographic features in automated generalization

    USGS Publications Warehouse

    Stum, Alexander K.; Buttenfield, Barbara P.; Stanislawski, Larry V.

    2017-01-01

    This paper demonstrates a working method to automatically detect and prune portions of waterbody polygons to support creation of a multi-scale hydrographic database. Water features are known to be sensitive to scale change; and thus multiple representations are required to maintain visual and geographic logic at smaller scales. Partial pruning of polygonal features—such as long and sinuous reservoir arms, stream channels that are too narrow at the target scale, and islands that begin to coalesce—entails concurrent management of the length and width of polygonal features as well as integrating pruned polygons with other generalized point and linear hydrographic features to maintain stream network connectivity. The implementation follows data representation standards developed by the U.S. Geological Survey (USGS) for the National Hydrography Dataset (NHD). Portions of polygonal rivers, streams, and canals are automatically characterized for width, length, and connectivity. This paper describes an algorithm for automatic detection and subsequent processing, and shows results for a sample of NHD subbasins in different landscape conditions in the United States.

  2. Bacterial biogeography influenced by shelf-basin exchange in the Arctic surface sediment at the Chukchi Borderland.

    PubMed

    Han, Dukki; Nam, Seung-Il; Ha, Ho Kyung; Kim, Hyoungjun; Sadowsky, Michael J; Lee, Yoo Kyung; Hur, Hor-Gil

    2016-02-01

    It has been known that continental shelves around the Arctic Ocean play a major role in the ventilation of the deep basins as a consequence of shelf-basin exchange. In the present study, we found that bacterial assemblage of the surface sediment was different from that of seawater while seawater harboured local bacterial assemblages in response to the Arctic hydrography. This finding suggests that the Arctic seafloor sediments may have distinctive bacterial biogeography. Moreover, the distribution of bacterial assemblages and physicochemical properties in surface sediments changed gradually from the Arctic continental shelf to deep-sea basin. Based on the results, bacterial biogeography in the Arctic seafloor sediments may be influenced by winnowing and re-deposition of surface sediments through the sediment gravity flow. The present study offers a deeper understanding of shelf convection and its role for the construction of bacterial assemblages in the Arctic Ocean. © 2015 Society for Applied Microbiology and John Wiley & Sons Ltd.

  3. The role of forcing agents on biogeochemical variability along the southwestern Adriatic coast: The Gulf of Manfredonia case study

    NASA Astrophysics Data System (ADS)

    Specchiulli, Antonietta; Bignami, Francesco; Marini, Mauro; Fabbrocini, Adele; Scirocco, Tommaso; Campanelli, Alessandra; Penna, Pierluigi; Santucci, Angela; D'Adamo, Raffaele

    2016-12-01

    This study investigates how multiple forcing factors such as rivers, surface marine circulation and winds affect hydrology and biogeochemical processes in the Gulf of Manfredonia and the seas around the Gargano peninsula, in the south-western Adriatic Sea. The study adopted an integrated approach, using in situ and remote sensing data, as well as the output of current models. The data reveal variability in the area's hydrography induced by local freshwater sources, the Western Adriatic Current (WAC) flowing from the north along the Italian coast, and the current patterns under different wind regimes. Specifically, exchange with offshore waters in the gulf induces variability in salinity and biogeochemical content, even within the same season, i.e. winter, in our case. This strong dependence on physical and biogeochemical factors makes the Manfredonia-Gargano ecosystem vulnerable to climate change, which could compromise its important role as a nursery area for the Adriatic Sea.

  4. Application of the Streamflow Prediction Tool to Estimate Sediment Dredging Volumes in Texas Coastal Waterways

    NASA Astrophysics Data System (ADS)

    Yeates, E.; Dreaper, G.; Afshari, S.; Tavakoly, A. A.

    2017-12-01

    Over the past six fiscal years, the United States Army Corps of Engineers (USACE) has contracted an average of about a billion dollars per year for navigation channel dredging. To execute these funds effectively, USACE Districts must determine which navigation channels need to be dredged in a given year. Improving this prioritization process results in more efficient waterway maintenance. This study uses the Streamflow Prediction Tool, a runoff routing model based on global weather forecast ensembles, to estimate dredged volumes. This study establishes regional linear relationships between cumulative flow and dredged volumes over a long-term simulation covering 30 years (1985-2015), using drainage area and shoaling parameters. The study framework integrates the National Hydrography Dataset (NHDPlus Dataset) with parameters from the Corps Shoaling Analysis Tool (CSAT) and dredging record data from USACE District records. Results in the test cases of the Houston Ship Channel and the Sabine and Port Arthur Harbor waterways in Texas indicate positive correlation between the simulated streamflows and actual dredging records.

  5. Use of geographic information systems for applications on gas pipeline rights-of-way

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sydelko, P.J.; Wilkey, P.L.

    1992-12-01

    Geographic information system (GIS) applications for the siting and monitoring of gas pipeline rights-of-way (ROWS) were developed for areas near Rio Vista, California. The data layers developed for this project represent geographic features, such as landcover, elevation, aspect, slope, soils, hydrography, transportation, endangered species, wetlands, and public line surveys. A GIS was used to develop and store spatial data from several sources; to manipulate spatial data to evaluate environmental and engineering issues associated with the siting, permitting, construction, maintenance, and monitoring of gas pipeline ROWS; and to graphically display analysis results. Examples of these applications include (1) determination of environmentallymore » sensitive areas, such as endangered species habitat, wetlands, and areas of highly erosive soils; (2) evaluation of engineering constraints, including shallow depth to bedrock, major hydrographic features, and shallow water table; (3) classification of satellite imagery for landuse/landcover that will affect ROWS; and (4) identification of alternative ROW corridors that avoid environmentally sensitive areas or areas with severe engineering constraints.« less

  6. GIS least-cost analysis approach for siting gas pipeline ROWs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sydelko, P.J.; Wilkey, P.L.

    1994-09-01

    Geographic-information-system applications for the siting and monitoring of gas pipeline rights-of-way (ROWS) were developed for areas near Rio Vista, California. The data layers developed for this project represent geographic features, such as landcover, elevation, aspect, slope, soils, hydrography, transportation corridors, endangered species habitats, wetlands, and public line surveys. A geographic information system was used to develop and store spatial data from several sources; to manipulate spatial data to evaluate environmental and engineering issues associated with the siting, permitting, construction, maintenance, and monitoring of gas-pipeline ROWS; and to graphically display analysis results. Examples of these applications include (1) determination of environmentallymore » sensitive areas, such as endangered species habitat, wetlands, and areas of highly erosive soils; (2) evaluation of engineering constraints, including shallow depth to bedrock, major hydrographic features, and shallow water table; (3) classification of satellite imagery for landuse/landcover that will affect ROWS; and (4) identification of alternative ROW corridors that avoid environmentally sensitive areas or areas with severe engineering constraints.« less

  7. Use of geographic information systems for applications on gas pipeline rights-of-way

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sydelko, P.J.

    1993-10-01

    Geographic information system (GIS) applications for the siting and monitoring of gas pipeline rights-of-way (ROWS) were developed for areas near Rio Vista, California. The data layers developed for this project represent geographic features, such as landcover, elevation, aspect, slope, soils, hydrography, transportation, endangered species, wetlands, and public line surveys. A GIS was used to develop and store spatial data from several sources; to manipulate spatial data to evaluate environmental and engineering issues associated with the siting, permitting, construction, maintenance, and monitoring of gas pipeline ROWS; and to graphically display analysis results. Examples of these applications include (1) determination of environmentallymore » sensitive areas, such as endangered species habitat, wetlands, and areas of highly erosive soils; (2) evaluation of engineering constraints, including shallow depth to bedrock, major hydrographic features, and shallow water table; (3) classification of satellite imagery for land use/landcover that will affect ROWS; and (4) identification of alternative ROW corridors that avoid environmentally sensitive areas or areas with severe engineering constraints.« less

  8. Use of geographic information systems for applications on gas pipeline rights-of-way

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sydelko, P.J.; Wilkey, P.L.

    1992-01-01

    Geographic information system (GIS) applications for the siting and monitoring of gas pipeline rights-of-way (ROWS) were developed for areas near Rio Vista, California. The data layers developed for this project represent geographic features, such as landcover, elevation, aspect, slope, soils, hydrography, transportation, endangered species, wetlands, and public line surveys. A GIS was used to develop and store spatial data from several sources; to manipulate spatial data to evaluate environmental and engineering issues associated with the siting, permitting, construction, maintenance, and monitoring of gas pipeline ROWS; and to graphically display analysis results. Examples of these applications include (1) determination of environmentallymore » sensitive areas, such as endangered species habitat, wetlands, and areas of highly erosive soils; (2) evaluation of engineering constraints, including shallow depth to bedrock, major hydrographic features, and shallow water table; (3) classification of satellite imagery for landuse/landcover that will affect ROWS; and (4) identification of alternative ROW corridors that avoid environmentally sensitive areas or areas with severe engineering constraints.« less

  9. Ocean export production and foraminiferal stable isotopes in the Antarctic Southern Ocean across the mid-Pleistocene transition

    NASA Astrophysics Data System (ADS)

    Hasenfratz, A. P.; Martinez-Garcia, A.; Jaccard, S.; Hodell, D. A.; Vance, D.; Bernasconi, S. M.; Greaves, M.; Haug, G. H.

    2014-12-01

    Changes in buoyancy forcing in the Antarctic Zone (AZ) of the Southern Ocean are believed to play an instrumental role in modulating atmospheric CO2 concentrations during glacial cycles by regulating the transfer of carbon between the ocean interior and the atmosphere. Indeed, a million-year-spanning high-resolution excess Barium record from the AZ of the South Atlantic (ODP 1094), which traces changes in export production, shows decreased export production during cold periods suggesting decreased overturning. Here, we extend this AZ export production record back to 1.6 Myr. In addition, we present new carbon and oxygen isotope records of benthic and planktic foraminifera from the same site, complemented by Mg/Ca measurements in some intervals. The interpretation of these new data in the context of other South Atlantic records contributes to a better understanding of Southern Ocean hydrography and its role in modulating glacial/interglacial cycles over the past 1.6 Myr.

  10. Hydropower Resource Assessment of Brazilian Streams

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Douglas G. Hall

    The Idaho National Laboratory (INL) in collaboration with the U.S. Geological Survey (USGS) with the assistance of the Empresa de Pesquisa Energetica (EPE) and the Agencia Nacional de Energia Electrica (ANEEL) has performed a comprehensive assessment of the hydropower potential of all Brazilian natural streams. The methodology by which the assessment was performed is described. The results of the assessment are presented including an estimate of the hydropower potential for all of Brazil, and the spatial distribution of hydropower potential thus providing results on a state by state basis. The assessment results have been incorporated into a geographic information systemmore » (GIS) application for the Internet called the Virtual Hydropower Prospector do Brasil. VHP do Brasil displays potential hydropower sites on a map of Brazil in the context of topography and hydrography, existing power and transportation infrastructure, populated places and political boundaries, and land use. The features of the application, which includes tools for finding and selecting potential hydropower sites and other features and displaying their attributes, is fully described.« less

  11. Vulnerable transportation and utility assets near actively migrating streams in Indiana

    USGS Publications Warehouse

    Sperl, Benjamin J.

    2017-11-02

    An investigation was completed by the U.S. Geological Survey in cooperation with the Indiana Office of Community and Rural Affairs that found 1,132 transportation and utility assets in Indiana are vulnerable to fluvial erosion hazards due to close proximity to actively migrating streams. Locations of transportation assets (bridges, roadways, and railroad lines) and selected utility assets (high-capacity overhead power-transmission lines, underground pipelines, water treatment facilities, and in-channel dams) were determined using aerial imagery hosted by the Google Earth platform. Identified assets were aggregated by stream reach, county, and class. Accompanying the report is a polyline shapefile of the stream reaches documented by Robinson. The shapefile, derived from line work in the National Hydrography Dataset and attributed with channel migration rates, is released with complete Federal Geographic Data Committee metadata. The data presented in this report are intended to help stakeholders and others identify high-risk areas where transportation and utility assets may be threatened by fluvial erosion hazards thus warranting consideration for mitigation strategies.

  12. Patient characteristics and service trends following abortion legalization in Mexico City, 2007-10.

    PubMed

    Mondragón y Kalb, Manuel; Ahued Ortega, Armando; Morales Velazquez, Jorge; Díaz Olavarrieta, Claudia; Valencia Rodríguez, Jorge; Becker, Davida; García, Sandra G

    2011-09-01

    Legal abortion services have been available in public and private health facilities in Mexico City since April 2007 for pregnancies of up to 12 weeks gestation. As of January 2011, more than 50,000 procedures have been performed by Ministry of Health hospitals and clinics. We researched trends in service users' characteristics, types of procedures performed, post-procedure complications, repeat abortions, and postabortion uptake of contraception in 15 designated hospitals from April 2007 to March 2010. The trend in procedures has been toward more medication and manual vacuum aspiration abortions and fewer done through dilation and curettage. Percentages of post-procedure complications and repeat abortions remain low (2.3 and 0.9 percent, respectively). Uptake of postabortion contraception has increased over time; 85 percent of women selected a method in 2009-10, compared with 73 percent in 2007-08. Our findings indicate that the Ministry of Health's program provides safe services that contribute to the prevention of repeat unintended pregnancies.

  13. Development of Novel SSR Markers for Flax (Linum usitatissimum L.) Using Reduced-Representation Genome Sequencing.

    PubMed

    Wu, Jianzhong; Zhao, Qian; Wu, Guangwen; Zhang, Shuquan; Jiang, Tingbo

    2016-01-01

    Flax ( Linum usitatissimum L.) is a major fiber and oil yielding crop grown in northeastern China. Identification of flax molecular markers is a key step toward improving flax yield and quality via marker-assisted breeding. Simple sequence repeat (SSR) markers, which are based on genomic structural variation, are considered the most valuable type of genetic marker for this purpose. In this study, we screened 1574 microsatellites from Linum usitatissimum L. obtained using reduced representation genome sequencing (RRGS) to systematically identify SSR markers. The resulting set of microsatellites consisted mainly of trinucleotide (56.10%) and dinucleotide (35.23%) repeats, with each motif consisting of 5-8 repeats. We then evaluated marker sensitivity and specificity based on samples of 48 flax isolates obtained from northeastern China. Using the new SSR panel, the results demonstrated that fiber flax and oilseed flax varieties clustered into two well separated groups. The novel SSR markers developed in this study show potential value for selection of varieties for use in flax breeding programs.

  14. The application of robotics to microlaryngeal laser surgery.

    PubMed

    Buckmire, Robert A; Wong, Yu-Tung; Deal, Allison M

    2015-06-01

    To evaluate the performance of human subjects, using a prototype robotic micromanipulator controller in a simulated, microlaryngeal operative setting. Observational cross-sectional study. Twenty-two human subjects with varying degrees of laser experience performed CO2 laser surgical tasks within a simulated microlaryngeal operative setting using an industry standard manual micromanipulator (MMM) and a prototype robotic micromanipulator controller (RMC). Accuracy, repeatability, and ablation consistency measures were obtained for each human subject across both conditions and for the preprogrammed RMC device. Using the standard MMM, surgeons with >10 previous laser cases performed superior to subjects with fewer cases on measures of error percentage and cumulative error (P = .045 and .03, respectively). No significant differences in performance were observed between subjects using the RMC device. In the programmed (P/A) mode, the RMC performed equivalently or superiorly to experienced human subjects on accuracy and repeatability measures, and nearly an order of magnitude better on measures of ablation consistency. The programmed RMC performed significantly better for repetition error when compared to human subjects with <100 previous laser cases (P = .04). Experienced laser surgeons perform better than novice surgeons on tasks of accuracy and repeatability using the MMM device but roughly equivalently using the novel RMC. Operated in the P/A mode, the RMC performs equivalently or superior to experienced laser surgeons using the industry standard MMM for all measured parameters, and delivers an ablation consistency nearly an order of magnitude better than human laser operators. NA. © 2014 The American Laryngological, Rhinological and Otological Society, Inc.

  15. Organizational Wellness Program Implementation and Evaluation: A Holistic Approach to Improve the Wellbeing of Middle Managers.

    PubMed

    Medina, Maria Del Consuelo; Calderon, Angelica; Blunk, Dan I; Mills, Brandy W; Leiner, Marie

    2018-06-01

    : Employee wellness programs can provide benefits to institutions as well as employees and their families. Despite the attempts of some organizations to implement programs that take a holistic approach to improve physical, mental, and social wellness, the most common programs are exclusively comprised of physical and nutritional components. In this study, we implemented a wellness program intervention, including training using a holistic approach to improve the wellbeing of middle managers in several multinational organizations. We included control and experimental groups to measure wellness and teamwork with two repeated measures. Our results indicated that employees receiving the intervention had improved measures of wellness and teamwork. A positive relationship was found between wellness and teamwork in the experimental group when compared with the control group. Taken together, the data suggest that implementation of these programs would provide valuable outcomes for both employees and organizations.

  16. Long-term facial improvement after repeated BoNT-A injections and mirror biofeedback exercises for chronic facial synkinesis: a case-series study.

    PubMed

    Mandrini, Silvia; Comelli, Mario; Dall'angelo, Anna; Togni, Rossella; Cecini, Miriam; Pavese, Chiara; Dalla Toffola, Elena

    2016-12-01

    Only few studies have considered the effects of the combined treatment with onabotulinumtoxinA (BoNT-A) injections and biofeedback (BFB) rehabilitation in the recovery of postparetic facial synkinesis (PPFS). To explore the presence of a persistent improvement in facial function out of the pharmacological effect of BoNT-A in subjects with established PPFS, after repeated sessions of BoNT-A injections combined with an educational facial training program using mirror biofeedback (BFB) exercises. Secondary objective was to investigate the trend of the presumed persistent improvement. Case-series study. Outpatient Clinic of Physical Medicine and Rehabilitation Unit. Twenty-seven patients (22 females; mean age 45±16 years) affected by an established peripheral facial palsy, treated with a minimum of three BoNT-A injections in association with mirror BFB rehabilitation. The interval between consecutive BoNT-A injections was at least five months. At baseline and before every BoNT-A injection+mirror BFB session (when the effect of the previous BoNT-A injection had vanished), patients were assessed with the Italian version of Sunnybrook Facial Grading System (SB). The statistical analysis considered SB composite and partial scores before each treatment session compared to the baseline scores. A significant improvement of the SB composite and partial scores was observed until the fourth session. Considering the "Symmetry of Voluntary Movement" partial score, the main improvement was observed in the muscles of the lower part of the face. In a chronic stage of postparetic facial synkinesis, patients may benefit from a combined therapy with repeated BoNT-A injections and an educational facial training program with mirror BFB exercises, gaining an improvement of the facial function up to the fourth session. This improvement reflects the acquired ability to use facial muscle correctly. It doesn't involve the injected muscles but those trained with mirror biofeedback exercises and it persists also when BoNT-A action has vanished. The combined therapy with repeated BoNT-A injections and an educational facial training program using mirror BFB exercises may be useful in the motor recovery of the muscles of the lower part of the face not injected but trained.

  17. Optimization of sequence alignment for simple sequence repeat regions.

    PubMed

    Jighly, Abdulqader; Hamwieh, Aladdin; Ogbonnaya, Francis C

    2011-07-20

    Microsatellites, or simple sequence repeats (SSRs), are tandemly repeated DNA sequences, including tandem copies of specific sequences no longer than six bases, that are distributed in the genome. SSR has been used as a molecular marker because it is easy to detect and is used in a range of applications, including genetic diversity, genome mapping, and marker assisted selection. It is also very mutable because of slipping in the DNA polymerase during DNA replication. This unique mutation increases the insertion/deletion (INDELs) mutation frequency to a high ratio - more than other types of molecular markers such as single nucleotide polymorphism (SNPs).SNPs are more frequent than INDELs. Therefore, all designed algorithms for sequence alignment fit the vast majority of the genomic sequence without considering microsatellite regions, as unique sequences that require special consideration. The old algorithm is limited in its application because there are many overlaps between different repeat units which result in false evolutionary relationships. To overcome the limitation of the aligning algorithm when dealing with SSR loci, a new algorithm was developed using PERL script with a Tk graphical interface. This program is based on aligning sequences after determining the repeated units first, and the last SSR nucleotides positions. This results in a shifting process according to the inserted repeated unit type.When studying the phylogenic relations before and after applying the new algorithm, many differences in the trees were obtained by increasing the SSR length and complexity. However, less distance between different linage had been observed after applying the new algorithm. The new algorithm produces better estimates for aligning SSR loci because it reflects more reliable evolutionary relations between different linages. It reduces overlapping during SSR alignment, which results in a more realistic phylogenic relationship.

  18. Surveillance of risk profiles among new and repeat blood donors with transfusion-transmissible infections from 1995 through 2003 in the Netherlands.

    PubMed

    Van der Bij, Akke K; Coutinho, Roel A; Van der Poel, Cees L

    2006-10-01

    To evaluate the effectiveness of blood donor selection, this study reports risk profiles of donors with transfusion-transmissible infections as obtained by ongoing surveillance, 1995 through 2003, in the Netherlands. A surveillance program was installed to monitor risk profiles among new and repeat donors infected with human immunodeficiency virus (HIV), hepatitis C virus (HCV), hepatitis B virus (HBV), or human T-lymphotropic virus (HTLV), or positive for the presence of syphilis antibodies. At posttest counseling, a physician interviewed donors to clarify possible sources of infection. A total of 167 repeat donors and 404 new donors were interviewed: 33 with HIV, 123 with HCV, 279 with HBV, 21 with HTLV, and 112 with syphilis antibodies. Most HBV, HCV, and HTLV infections were among new donors (80, 85, and 67%), whereas most HIV infections were among repeat donors (79%). Nearly 25 percent of the donors did not report factors at screening that would have deferred them from donating blood. At posttest interviews, new donors with HCV often reported injecting drug use (19%). Repeat donors with HIV often reported male-to-male sex (8/26, 31%). A significant level of deferrable behavioral risks was found among donors with confirmed transfusion-transmissible infections that persist despite current donor selection. Reporting such behavior at initial donor selection would have eliminated a substantial part of the infections found. This study argues against relaxing the existing donor deferral of persons practicing male-to-male sex, given their significant proportion of HIV infections among repeat donors. Systematic surveillance of risk factors among infected blood donors provides ongoing information about the effectivity of donor selection and is recommended to evaluate and optimize blood policies.

  19. [The effects of a weight control program with competence].

    PubMed

    Seo, Yeong-Mi; Suh, Sun-Lim

    2007-12-01

    The purpose of this study was to identify the effects of a weight control program and compliancy in overweight women. This program was composed of strategies to modify diet and exercise and to change compliance and self determination over an 8 week period. The subjects were 19 overweight women who participated in our project voluntarily. Data was collected from May 4 to June 30 of 2007. The program consisted of regular rapid walking exercise, diet, mobile phone messages and e-mail. The data was analyzed by Repeated Measures ANOVA using the SPSS WIN program. According to 3 assessment periods, there were significant differences in body weight, body mass index, and compliance. There were no significant differences in self determination. These findings suggest that more intensive interventions may be needed to demonstrate a change in self determination.

  20. Mycorrhizae promote fire adaptation in oak-hickory forests in Eastern USA

    Treesearch

    Aaron D. Stottlemyer; G. Geoff Wang; Thomas A. Waldrop

    2015-01-01

    Prescribed fire is commonly used in silvicultural programs designed to promote oak (Quercus spp.) and hickory (Carya spp.) regeneration in eastern deciduous forests (Brose and others 2008). Thick bark, hypogeal germination, large root systems, repeated-prolific sprouting, and the ability to compartmentalize scars are well-known characteristics that enable oaks and...

  1. 77 FR 33106 - Energy Conservation Program: Test Procedure for Microwave Ovens

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-06-05

    ... due to the different masses and shapes of the potatoes. DOE observed, similar to the tests for... consumer use, (2) the repeatability of energy use measurements using different food loads, and (3) consumer... ``normal usage'' and the water temperature rise of 50 degrees Celsius ([deg]C) achieves eating temperature...

  2. Passive reestablishment of riparian vegetation following removal of invasive knotweed (Polygonum)

    Treesearch

    Shannon M. Claeson; Peter A. Bisson

    2013-01-01

    Japanese knotweed and congeners are invasive to North America and Europe and spread aggressively along rivers establishing dense monotypic stands, thereby reducing native riparian plant diversity, structure, and function. Noxious weed control programs attempt to eradicate the knotweed with repeated herbicide applications under the assumption that the system will...

  3. Better by the Year. The FRI Annual Giving Book.

    ERIC Educational Resources Information Center

    Williams, M. Jane

    Designed for a nonprofit organization executive, this book suggests how to start and run an increasingly profitable program for attracting the kind of gifts that will be repeated year after year. Preliminary preparations, the launch and administration of a campaign, four ways to reach higher goals, and annual giving ideas from education, health…

  4. Cytoplasmic and nuclear localizations are important for the hypersensitive response conferred by maize autoactive Rp1-D21 protein

    USDA-ARS?s Scientific Manuscript database

    Disease resistance (R-) genes have been isolated from many plant species. Most encode nucleotide binding leucine-rich-repeat (NLR) proteins that trigger a rapid localized programmed cell death termed the hypersensitive response (HR) upon pathogen recognition. Despite their structural similarities, d...

  5. Out of Sight, Out of Mind: Do Repeating Students Overlook Online Course Components?

    ERIC Educational Resources Information Center

    Holland, Jane; Clarke, Eric; Glynn, Mark

    2016-01-01

    E-Learning is becoming an integral part of undergraduate medicine, with many curricula incorporating a number of online activities and resources, in addition to more traditional teaching methods. This study examines physical attendance, online activity, and examination outcomes in a first-year undergraduate medical program. All 358 students who…

  6. Escaping Preconceived Notions: One Educator's Teaching Experience in West Africa

    ERIC Educational Resources Information Center

    Zarestky, Jill

    2016-01-01

    In this essay, Jill Zarestky shares what she learned about creating student-centered adult education programs with those who wish to teach adults internationally or in similar contexts. Prior to traveling, Zarestky repeatedly heard from other Westerners (NGO employees and volunteers) how little the women knew and how desperately they needed her…

  7. Establishment of design criteria for acceptable failure modes and fail safe considerations for the space shuttle structural system

    NASA Technical Reports Server (NTRS)

    Westrup, R. W.

    1971-01-01

    The application of general design approaches for preventing failures due to repeated load cycles is briefly discussed. Program objective, mission requirements, and structural design criteria are summarized. Discrete structural elements and associated sections were selected for detailed strength, fatigue, and fracture mechanics investigations.

  8. Effects of Thinking Style on Design Strategies: Using Bridge Construction Simulation Programs

    ERIC Educational Resources Information Center

    Sun, Chuen-Tsai; Wang, Dai-Yi; Chang, Yu-Yeh

    2013-01-01

    Computer simulation users can freely control operational factors and simulation results, repeat processes, make changes, and learn from simulation environment feedback. The focus of this paper is on simulation-based design tools and their effects on student learning processes in a group of 101 Taiwanese senior high school students. Participants…

  9. 49 CFR Appendix G to Part 227 - Schedule of Civil Penalties

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... ADMINISTRATION, DEPARTMENT OF TRANSPORTATION OCCUPATIONAL NOISE EXPOSURE Pt. 227, App. G Appendix G to Part 227... Requirements 227.103Noise monitoring program: (a) Failure to develop and/or implement a noise monitoring... levels and/or make noise measurements as required 2,500 5,000 (d) Failure to repeat noise monitoring...

  10. Improving Expository Writing Skills with Explicit and Strategy Instructional Methods in Inclusive Middle School Classrooms

    ERIC Educational Resources Information Center

    Cihak, David F.; Castle, Kristin

    2011-01-01

    Forty eighth grade students with and without learning disabilities in an inclusive classroom participated in an adapted Step-Up to Writing (Auman, 2002) intervention program. The intervention targeted expository essays and composing topic, detail, transitional, and concluding sentences. A repeated-measures ANOVA indicated that both students with…

  11. Direct and Passive Prenatal Nicotine Exposure and the Development of Externalizing Psychopathology

    ERIC Educational Resources Information Center

    Gatzke-Kopp, Lisa M.; Beauchaine, Theodore P.

    2007-01-01

    The association between maternal smoking during pregnancy and childhood antisocial outcomes has been demonstrated repeatedly across a variety of outcomes. Yet debate continues as to whether this association reflects a direct programming effect of nicotine on fetal brain development, or a phenotypic indicator of heritable liability passed from…

  12. The Short- and Long-Term Effects of Quality Physical Education

    ERIC Educational Resources Information Center

    Siegel, Donald

    2005-01-01

    The short- and long-term effects of quality physical education programs have been a subject of considerable debate by educational administrators and state legislators during the past decade. While physical educators have repeatedly demonstrated the importance of daily moderate and vigorous physical activity on the immediate health and wellbeing of…

  13. SERT Transformation Study. Technical Report No. 70.

    ERIC Educational Resources Information Center

    Day, Richard; And Others

    This research report deals with the transformations of stimulus sentences that primary grade speakers of Hawaii Creole English (HCE) made when they were asked to repeat sentences said to them in Standard English. The test used was the Kamehameha Early Education Program (KEEP) Standard English Repetition Test (SERT) which was administered to the 21…

  14. Teaching Note-Teaching Student Interviewing Competencies through Second Life

    ERIC Educational Resources Information Center

    Tandy, Cynthia; Vernon, Robert; Lynch, Darlene

    2017-01-01

    A prototype standardized client was created and programmed to respond to students in the 3D virtual world of Second Life. This automaton, called a "chatbot," was repeatedly interviewed by beginning MSW students in a practice course as a learning exercise. Initial results were positive and suggest the use of simulated clients in virtual…

  15. Unit Mastery Learning in an Introductory Geography Course

    ERIC Educational Resources Information Center

    Healy, John R.; Stephenson, Larry K.

    1975-01-01

    The unit mastery learning system is a method of individualized, self-paced learning which, through repeatable testing, enables students to attain a mastery of the content of one unit before proceeding to the next in the program. This article describes the unit mastery learning system and its application in an introductory geography course at Hilo…

  16. Challenging Elementary Learners with Programmable Robots during Free Play and Direct Instruction

    ERIC Educational Resources Information Center

    McCoy-Parker, Kimberly S.; Paull, Lindsey N.; Rule, Audrey C.; Montgomery, Sarah E.

    2017-01-01

    Computer programming skills are important to many current careers; teaching robot coding to elementary students can start a positive foundation for technological careers, develop problem-solving skills, and growth mindsets. This study, through a repeated measures design involving students in two classrooms at two widely-separated grade levels…

  17. Vascular plant and vertebrate inventories in Sonoran Desert National Parks

    Treesearch

    Cecilia A. Schmidt; Eric W. Albrecht; Brian F. Powell; William L. Halvorson

    2005-01-01

    Biological inventories are important for natural resource management and interpretation, and can form a foundation for long-term monitoring programs. We inventoried vascular plants and vertebrates in nine National Parks in southern Arizona and western New Mexico from 2000 to 2004 using repeatable designs, commonly accepted methods, and standardized protocols. At...

  18. What can be Learned from Silage Breeding Programs?

    NASA Astrophysics Data System (ADS)

    Lorenz, Aaron J.; Coors, James G.

    Improving the quality of cellulosic ethanol feedstocks through breeding and genetic manipulation could significantly impact the economics of this industry. Attaining this will require comprehensive and rapid characterization of large numbers of samples. There are many similarities between improving corn silage quality for dairy production and improving feedstock quality for cellulosic ethanol. It was our objective to provide insight into what is needed for genetic improvement of cellulosic feedstocks by reviewing the development and operation of a corn silage breeding program. We discuss the evolving definition of silage quality and relate what we have learned about silage quality to what is needed for measuring and improving feedstock quality. In addition, repeatability estimates of corn stover traits are reported for a set of hybrids. Repeatability of theoretical ethanol potential measured by near-infrared spectroscopy is high, suggesting that this trait may be easily improved through breeding. Just as cell wall digestibility has been factored into the latest measurements of silage quality, conversion efficiency should be standardized and included in indices of feedstock quality to maximize overall, economical energy availability.

  19. An international comparative overview on the rehabilitation of offenders and effective measures for the prevention of recidivism.

    PubMed

    Someda, Kei

    2009-04-01

    The prevention of recidivism has long been a central issue in criminal justice policy. This is justified because an offender who repeatedly commits crime inflicts far greater damage on society than an offender who commits a crime just once in his/her lifetime. For instance, research by the Ministry of Justice of Japan (2007) reveals that only approximately 30% of repeat offenders were responsible for around 60% of the crime committed in Japan from 1948 to 2006. It has been proven that the realization of the rehabilitation of offenders contributes to the reduction of recidivism. The successful rehabilitation of offenders depends in large part upon the effectiveness of the community-based treatment given to offenders based upon an appropriate assessment of multidimensional risk factors and a multidisciplinary approach. In exploring effective community-based treatment of offenders using a multidisciplinary approach, the author touches upon several effective programs from an international comparative view, including: intensive supervision probation/parole (ISP), Drug Court, cognitive behavioral treatment programs and some recent developments related to this field in Japan.

  20. The Ontario Veterinary College Hip Certification Program -- assessing inter- and intra-observer repeatability and comparison of findings to those of the Orthopedic Foundation for Animals.

    PubMed

    Chalmers, Heather J; Nykamp, Stephanie; Lerer, Assaf

    2013-01-01

    In Canada, the Ontario Veterinary College (OVC) has offered radiographic screening for hip dysplasia for many years, but there are other options for this service including the Orthopedic Foundation for Animals (OFA). There are some differences between the OFA and the OVC methods, and this study compares the OVC and OFA hip certification results in 37 dogs. There was good agreement between the two programs but in some instances there was a difference in the pass/fail status of a dog. Neither the OFA nor the OVC was more likely to fail or pass a given dog. The repeatability of the OVC results was assessed by both inter- and intra-observer comparisons in 100 dogs. There was at least 86% agreement among and within radiologists, but in 5 cases the disagreement resulted in a difference in the pass/fail status of the dog. These results illustrate the inherent variation in radiographic hip evaluation and highlight the importance of consensus grading practices to improve the accuracy of hip evaluation.

  1. DNAGear--a free software for spa type identification in Staphylococcus aureus.

    PubMed

    AL-Tam, Faroq; Brunel, Anne-Sophie; Bouzinbi, Nicolas; Corne, Philippe; Bañuls, Anne-Laure; Shahbazkia, Hamid Reza

    2012-11-19

    Staphylococcus aureus is both human commensal and an important human pathogen, responsible for community-acquired and nosocomial infections ranging from superficial wound infections to invasive infections, such as osteomyelitis, bacteremia and endocarditis, pneumonia or toxin shock syndrome with a mortality rate up to 40%. S. aureus reveals a high genetic polymorphism and detecting the genotypes is extremely useful to manage and prevent possible outbreaks and to understand the route of infection. One of current and expanded typing method is based on the X region of the spa gene composed of a succession of repeats of 21 to 27 bp. More than 10000 types are known. Extracting the repeats is impossible by hand and needs a dedicated software. Unfortunately the only software on the market is a commercial program from Ridom. This article presents DNAGear, a free and open source software with a user friendly interface written all in Java on top of NetBeans Platform to perform spa typing, detecting new repeats and new spa types and synchronizing automatically the files with the open access database. The installation is easy and the application is platform independent. In fact, the SPA identification is a formal regular expression matching problem and the results are 100% exact. As the program is using Java embedded modules written over string manipulation of well established algorithms, the exactitude of the solution is perfectly established. DNAGear is able to identify the types of the S. aureus sequences and detect both new types and repeats. Comparing to manual processing, which is time consuming and error prone, this application saves a lot of time and effort and gives very reliable results. Additionally, the users do not need to prepare the forward-reverse sequences manually, or even by using additional tools. They can simply create them in DNAGear and perform the typing task. In short, researchers who do not have commercial software will benefit a lot from this application.

  2. Early experience of a novel-environment in isolation primes a fearful phenotype characterized by persistent amygdala activation.

    PubMed

    Daskalakis, Nikolaos P; Diamantopoulou, Anastasia; Claessens, Sanne E F; Remmers, Elisa; Tjälve, Marika; Oitzl, Melly S; Champagne, Danielle L; de Kloet, E Ronald

    2014-01-01

    Prolonged maternal separation (MS) activates the neonate's hypothalamus-pituitary-adrenal axis causing elevated basal and stress-induced corticosterone levels that may initiate amygdala-dependent fear learning. Here we test the hypothesis that the adult fearful phenotype is programmed by the pup's stressful experience during prolonged MS rather than by prolonged maternal absence per se. For this purpose, Wistar rat pups were exposed, on postnatal-day (pnd) 3, to: (i) repeated-MS in home-environment (HOME-SEP), 8h-MS daily for three days with the pups remaining together in the home-cage; (ii) repeated-MS in a novel-environment (NOVEL-SEP), with the same separation procedure, but now the pups were individually housed in a novel-environment during the 8h dam's absence; (iii) repeated handling, which consisted of daily brief (15 min instead of 8h) MS in the home-altogether or in a novel-environment individually (HOME-HAN and NOVEL-HAN, respectively); (iv) no-separation/no-handling (NON-SEP/NON-HAN) control condition, in which pups were left undisturbed in their home-cage. Compared to HOME-SEP rats, the NOVEL-SEP rats showed one day after the last MS enhanced stress-induced amygdala c-Fos expression and ACTH-release, despite of reduced adrenal corticosterone secretion. The higher amygdala c-Fos expression, ACTH-release and reduced corticosterone output observed postnatally, persisted into adulthood of the NOVEL-SEP animals. Behaviorally, NOVEL-SEP juvenile rats displayed deficits in social play, had intact spatial memory in the peri-pubertal period and showed more contextual fear memory compared to HOME-SEP in adulthood. Finally, NOVEL-HAN, compared to HOME-HAN, displayed increased stress-induced corticosterone output, no deficits in social play and reduced contextual fear. In conclusion, programming of an adult fearful phenotype linked to amygdala priming develops if pups are repeatedly isolated from peers in a novel-environment, while away from the dam for a prolonged period of time. Copyright © 2013 Elsevier Ltd. All rights reserved.

  3. DNAGear- a free software for spa type identification in Staphylococcus aureus

    PubMed Central

    2012-01-01

    Background Staphylococcus aureus is both human commensal and an important human pathogen, responsible for community-acquired and nosocomial infections ranging from superficial wound infections to invasive infections, such as osteomyelitis, bacteremia and endocarditis, pneumonia or toxin shock syndrome with a mortality rate up to 40%. S. aureus reveals a high genetic polymorphism and detecting the genotypes is extremely useful to manage and prevent possible outbreaks and to understand the route of infection. One of current and expanded typing method is based on the X region of the spa gene composed of a succession of repeats of 21 to 27 bp. More than 10000 types are known. Extracting the repeats is impossible by hand and needs a dedicated software. Unfortunately the only software on the market is a commercial program from Ridom. Findings This article presents DNAGear, a free and open source software with a user friendly interface written all in Java on top of NetBeans Platform to perform spa typing, detecting new repeats and new spa types and synchronizing automatically the files with the open access database. The installation is easy and the application is platform independent. In fact, the SPA identification is a formal regular expression matching problem and the results are 100% exact. As the program is using Java embedded modules written over string manipulation of well established algorithms, the exactitude of the solution is perfectly established. Conclusions DNAGear is able to identify the types of the S. aureus sequences and detect both new types and repeats. Comparing to manual processing, which is time consuming and error prone, this application saves a lot of time and effort and gives very reliable results. Additionally, the users do not need to prepare the forward-reverse sequences manually, or even by using additional tools. They can simply create them in DNAGear and perform the typing task. In short, researchers who do not have commercial software will benefit a lot from this application. PMID:23164452

  4. Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing.

    PubMed

    Hribová, Eva; Neumann, Pavel; Matsumoto, Takashi; Roux, Nicolas; Macas, Jirí; Dolezel, Jaroslav

    2010-09-16

    Bananas and plantains (Musa spp.) are grown in more than a hundred tropical and subtropical countries and provide staple food for hundreds of millions of people. They are seed-sterile crops propagated clonally and this makes them vulnerable to a rapid spread of devastating diseases and at the same time hampers breeding improved cultivars. Although the socio-economic importance of bananas and plantains cannot be overestimated, they remain outside the focus of major research programs. This slows down the study of nuclear genome and the development of molecular tools to facilitate banana improvement. In this work, we report on the first thorough characterization of the repeat component of the banana (M. acuminata cv. 'Calcutta 4') genome. Analysis of almost 100 Mb of sequence data (0.15× genome coverage) permitted partial sequence reconstruction and characterization of repetitive DNA, making up about 30% of the genome. The results showed that the banana repeats are predominantly made of various types of Ty1/copia and Ty3/gypsy retroelements representing 16 and 7% of the genome respectively. On the other hand, DNA transposons were found to be rare. In addition to new families of transposable elements, two new satellite repeats were discovered and found useful as cytogenetic markers. To help in banana sequence annotation, a specific Musa repeat database was created, and its utility was demonstrated by analyzing the repeat composition of 62 genomic BAC clones. A low-depth 454 sequencing of banana nuclear genome provided the largest amount of DNA sequence data available until now for Musa and permitted reconstruction of most of the major types of DNA repeats. The information obtained in this study improves the knowledge of the long-range organization of banana chromosomes, and provides sequence resources needed for repeat masking and annotation during the Musa genome sequencing project. It also provides sequence data for isolation of DNA markers to be used in genetic diversity studies and in marker-assisted selection.

  5. Repetitive part of the banana (Musa acuminata) genome investigated by low-depth 454 sequencing

    PubMed Central

    2010-01-01

    Background Bananas and plantains (Musa spp.) are grown in more than a hundred tropical and subtropical countries and provide staple food for hundreds of millions of people. They are seed-sterile crops propagated clonally and this makes them vulnerable to a rapid spread of devastating diseases and at the same time hampers breeding improved cultivars. Although the socio-economic importance of bananas and plantains cannot be overestimated, they remain outside the focus of major research programs. This slows down the study of nuclear genome and the development of molecular tools to facilitate banana improvement. Results In this work, we report on the first thorough characterization of the repeat component of the banana (M. acuminata cv. 'Calcutta 4') genome. Analysis of almost 100 Mb of sequence data (0.15× genome coverage) permitted partial sequence reconstruction and characterization of repetitive DNA, making up about 30% of the genome. The results showed that the banana repeats are predominantly made of various types of Ty1/copia and Ty3/gypsy retroelements representing 16 and 7% of the genome respectively. On the other hand, DNA transposons were found to be rare. In addition to new families of transposable elements, two new satellite repeats were discovered and found useful as cytogenetic markers. To help in banana sequence annotation, a specific Musa repeat database was created, and its utility was demonstrated by analyzing the repeat composition of 62 genomic BAC clones. Conclusion A low-depth 454 sequencing of banana nuclear genome provided the largest amount of DNA sequence data available until now for Musa and permitted reconstruction of most of the major types of DNA repeats. The information obtained in this study improves the knowledge of the long-range organization of banana chromosomes, and provides sequence resources needed for repeat masking and annotation during the Musa genome sequencing project. It also provides sequence data for isolation of DNA markers to be used in genetic diversity studies and in marker-assisted selection. PMID:20846365

  6. Extraction and utilization of the repeating patterns for CP writing in mask making

    NASA Astrophysics Data System (ADS)

    Shoji, Masahiro; Inoue, Tadao; Yamabe, Masaki

    2010-05-01

    In May 2006, the Mask Design, Drawing, and Inspection Technology Research Department (Mask D2I) at the Association of Super-Advanced Electronics Technologies (ASET) launched a 4-year program for reducing mask manufacturing cost and TAT by concurrent optimization of Mask Data Preparation (MDP), mask writing, and mask inspection [1]. Figure 1 shows an outline of the project at Mask D2I at ASET. As one of the tasks being pursued at the Mask Design Data Technology Research Laboratory we have evaluated the effect of reducing the writing shot counts by utilizing the repeating patterns, and that showed positive impact on mask making by using CP writing. During the past four years, we have developed a software to extract repeating patterns from fractured OPCed mask data and have evaluated the efficiency of reducing the writing shot counts using the repeating patterns with this software. In this evaluation, we have used many actual device production data obtained from the member companies of Mask D2I. To the extraction software, we added new functions for extracting common repeating patterns from a set of multiple masks, and studied how this step affects the ratio of reducing the shot counts in comparison to the case of utilization of the repeating patterns for single mask. We have also developed a software that uses the result of extracting repeating patterns and prepares writing-data for the MCC/CP writing system which has been developed at the Mask Writing Equipment Technology Research Laboratory. With this software, we have examined how EB proximity effect on CP writing affects in reducing the shot count where CP shots with large CD errors have to be divided into VSB shots. In this paper we will report on making common CP mask from a set of multiple actual device data by using these software, and will also report on the results of CP writing and calculation of writing-TAT by MCC/CP writing system.

  7. Simulation of electrical and thermal fields in a multimode microwave oven using software written in C++

    NASA Astrophysics Data System (ADS)

    Abrudean, C.

    2017-05-01

    Due to multiple reflexions on walls, the electromagnetic field in a multimode microwave oven is difficult to estimate analytically. This paper presents a C++ program that calculates the electromagnetic field in a resonating cavity with an absorbing payload, uses the result to calculate heating in the payload taking its properties into account and then repeats. This results in a simulation of microwave heating, including phenomena like thermal runaway. The program is multithreaded to make use of today’s common multiprocessor/multicore computers.

  8. An "Intelligent" Optical Design Program

    NASA Astrophysics Data System (ADS)

    Bohachevsky, I. O.; Viswanathan, V. K.; Woodfin, G.

    1984-06-01

    Described is a general approach to the development of computer programs capable of designing image-forming optical systems without human intervention and of improving their performance with repeated attempts. The approach utilizes two ideas: 1) interpretation of technical design as a mapping in the configuration space of technical characteristics and 2) development of an "intelligent" routine that recognizes global optima. Examples of lens systems designed and used in the development of the general approach are presented, current status of the project is summarized, and plans for the future efforts are indicated.

  9. NATIONAL-SCALE ASSESSMENT OF AIR TOXICS RISKS ...

    EPA Pesticide Factsheets

    The national-scale assessment of air toxics risks is a modeling assessment which combines emission inventory development, atmospheric fate and transport modeling, exposure modeling, and risk assessment to characterize the risk associated with inhaling air toxics from outdoor sources. This national-scale effort will be initiated for the base year 1996 and repeated every three years thereafter to track trends and inform program development. Provide broad-scale understanding of inhalation risks for a subset of atmospherically-emitted air toxics to inform further data-gathering efforts and priority-setting for the EPA's Air Toxics Programs.

  10. Eating better for less: a national discount program for healthy food purchases in South Africa.

    PubMed

    An, Ruopeng; Patel, Deepak; Segal, Darren; Sturm, Roland

    2013-01-01

    To examine whether reducing prices for healthy food purchases leads to changes in self-reported measures of food consumption and weight status. Repeated surveys of about 350,000 HealthyFood participants and nonparticipants. Program participation is associated with more consumption of fruits/vegetables and whole-grain foods and less consumption of high sugar/salt foods, fried foods, processed meats, and fast food. There is no strong evidence that participation reduces obesity. A substantial price intervention might be effective in improving diets.

  11. Using artificial intelligence to control fluid flow computations

    NASA Technical Reports Server (NTRS)

    Gelsey, Andrew

    1992-01-01

    Computational simulation is an essential tool for the prediction of fluid flow. Many powerful simulation programs exist today. However, using these programs to reliably analyze fluid flow and other physical situations requires considerable human effort and expertise to set up a simulation, determine whether the output makes sense, and repeatedly run the simulation with different inputs until a satisfactory result is achieved. Automating this process is not only of considerable practical importance but will also significantly advance basic artificial intelligence (AI) research in reasoning about the physical world.

  12. Spaceborne Photonics Institute

    NASA Technical Reports Server (NTRS)

    Venable, D. D.; Farrukh, U. O.; Han, K. S.; Hwang, I. H.; Jalufka, N. W.; Lowe, C. W.; Tabibi, B. M.; Lee, C. J.; Lyons, D.; Maclin, A.

    1994-01-01

    This report describes in chronological detail the development of the Spaceborne Photonics Institute as a sustained research effort at Hampton University in the area of optical physics. This provided the research expertise to initiate a PhD program in Physics. Research was carried out in the areas of: (1) modelling of spaceborne solid state laser systems; (2) amplified spontaneous emission in solar pumped iodine lasers; (3) closely simulated AM0 CW solar pumped iodine laser and repeatedly short pulsed iodine laser oscillator; (4) a materials spectroscopy and growth program; and (5) laser induced fluorescence and atomic and molecular spectroscopy.

  13. Evaluation of catchment delineation methods for the medium-resolution National Hydrography Dataset

    USGS Publications Warehouse

    Johnston, Craig M.; Dewald, Thomas G.; Bondelid, Timothy R.; Worstell, Bruce B.; McKay, Lucinda D.; Rea, Alan; Moore, Richard B.; Goodall, Jonathan L.

    2009-01-01

    Different methods for determining catchments (incremental drainage areas) for stream segments of the medium-resolution (1:100,000-scale) National Hydrography Dataset (NHD) were evaluated by the U.S. Geological Survey (USGS), in cooperation with the U.S. Environmental Protection Agency (USEPA). The NHD is a comprehensive set of digital spatial data that contains information about surface-water features (such as lakes, ponds, streams, and rivers) of the United States. The need for NHD catchments was driven primarily by the goal to estimate NHD streamflow and velocity to support water-quality modeling. The application of catchments for this purpose also demonstrates the broader value of NHD catchments for supporting landscape characterization and analysis. Five catchment delineation methods were evaluated. Four of the methods use topographic information for the delineation of the NHD catchments. These methods include the Raster Seeding Method; two variants of a method first used in a USGS New England study-one used the Watershed Boundary Dataset (WBD) and the other did not-termed the 'New England Methods'; and the Outlet Matching Method. For these topographically based methods, the elevation data source was the 30-meter (m) resolution National Elevation Dataset (NED), as this was the highest resolution available for the conterminous United States and Hawaii. The fifth method evaluated, the Thiessen Polygon Method, uses distance to the nearest NHD stream segments to determine catchment boundaries. Catchments were generated using each method for NHD stream segments within six hydrologically and geographically distinct Subbasins to evaluate the applicability of the method across the United States. The five methods were evaluated by comparing the resulting catchments with the boundaries and the computed area measurements available from several verification datasets that were developed independently using manual methods. The results of the evaluation indicated that the two New England Methods provided the most accurate catchment boundaries. The New England Method with the WBD provided the most accurate results. The time and cost to implement and apply these automated methods were also considered in ultimately selecting the methods used to produce NHD catchments for the conterminous United States and Hawaii. This study was conducted by a joint USGS-USEPA team during the 2-year period that ended in September 2004. During the following 2-year period ending in the fall of 2006, the New England Methods were used to produce NHD catchments as part of a multiagency effort to generate the NHD streamflow and velocity estimates for a suite of integrated geospatial products known as 'NHDPlus.'

  14. High-throughput analysis of the satellitome illuminates satellite DNA evolution

    NASA Astrophysics Data System (ADS)

    Ruiz-Ruano, Francisco J.; López-León, María Dolores; Cabrero, Josefa; Camacho, Juan Pedro M.

    2016-07-01

    Satellite DNA (satDNA) is a major component yet the great unknown of eukaryote genomes and clearly underrepresented in genome sequencing projects. Here we show the high-throughput analysis of satellite DNA content in the migratory locust by means of the bioinformatic analysis of Illumina reads with the RepeatExplorer and RepeatMasker programs. This unveiled 62 satDNA families and we propose the term “satellitome” for the whole collection of different satDNA families in a genome. The finding that satDNAs were present in many contigs of the migratory locust draft genome indicates that they show many genomic locations invisible by fluorescent in situ hybridization (FISH). The cytological pattern of five satellites showing common descent (belonging to the SF3 superfamily) suggests that non-clustered satDNAs can become into clustered through local amplification at any of the many genomic loci resulting from previous dissemination of short satDNA arrays. The fact that all kinds of satDNA (micro- mini- and satellites) can show the non-clustered and clustered states suggests that all these elements are mostly similar, except for repeat length. Finally, the presence of VNTRs in bacteria, showing similar properties to non-clustered satDNAs in eukaryotes, suggests that this kind of tandem repeats show common properties in all living beings.

  15. Development of Multiple-Locus Variable-Number Tandem-Repeat Analysis for Molecular Subtyping of Campylobacter jejuni by Using Capillary Electrophoresis

    PubMed Central

    Techaruvichit, Punnida; Vesaratchavest, Mongkol; Keeratipibul, Suwimon; Kuda, Takashi; Kimura, Bon

    2015-01-01

    Campylobacter jejuni is a common cause of the frequently reported food-borne diseases in developed and developing nations. This study describes the development of multiple-locus variable-number tandem-repeat (VNTR) analysis (MLVA) using capillary electrophoresis as a novel typing method for microbial source tracking and epidemiological investigation of C. jejuni. Among 36 tandem repeat loci detected by the Tandem Repeat Finder program, 7 VNTR loci were selected and used for characterizing 60 isolates recovered from chicken meat samples from retail shops, samples from chicken meat processing factory, and stool samples. The discrimination ability of MLVA was compared with that of multilocus sequence typing (MLST). MLVA (diversity index of 0.97 with 31 MLVA types) provided slightly higher discrimination than MLST (diversity index of 0.95 with 25 MLST types). The overall concordance between MLVA and MLST was estimated at 63% by adjusted Rand coefficient. MLVA predicted MLST type better than MLST predicted MLVA type, as reflected by Wallace coefficient (Wallace coefficient for MLVA to MLST versus MLST to MLVA, 86% versus 51%). MLVA is a useful tool and can be used for effective monitoring of C. jejuni and investigation of epidemics caused by C. jejuni. PMID:26025899

  16. The Pattern and Loci of Training-Induced Brain Changes in Healthy Older Adults Are Predicted by the Nature of the Intervention

    PubMed Central

    Belleville, Sylvie; Mellah, Samira; de Boysson, Chloé; Demonet, Jean-Francois; Bier, Bianca

    2014-01-01

    There is enormous interest in designing training methods for reducing cognitive decline in healthy older adults. Because it is impaired with aging, multitasking has often been targeted and has been shown to be malleable with appropriate training. Investigating the effects of cognitive training on functional brain activation might provide critical indication regarding the mechanisms that underlie those positive effects, as well as provide models for selecting appropriate training methods. The few studies that have looked at brain correlates of cognitive training indicate a variable pattern and location of brain changes - a result that might relate to differences in training formats. The goal of this study was to measure the neural substrates as a function of whether divided attentional training programs induced the use of alternative processes or whether it relied on repeated practice. Forty-eight older adults were randomly allocated to one of three training programs. In the SINGLE REPEATED training, participants practiced an alphanumeric equation and a visual detection task, each under focused attention. In the DIVIDED FIXED training, participants practiced combining verification and detection by divided attention, with equal attention allocated to both tasks. In the DIVIDED VARIABLE training, participants completed the task by divided attention, but were taught to vary the attentional priority allocated to each task. Brain activation was measured with fMRI pre- and post-training while completing each task individually and the two tasks combined. The three training programs resulted in markedly different brain changes. Practice on individual tasks in the SINGLE REPEATED training resulted in reduced brain activation whereas DIVIDED VARIABLE training resulted in a larger recruitment of the right superior and middle frontal gyrus, a region that has been involved in multitasking. The type of training is a critical factor in determining the pattern of brain activation. PMID:25119464

  17. The effect of intervention on the free-play experience for mothers and their infants with developmental delay and cerebral palsy.

    PubMed

    Redditi Hanzlik, J

    1989-01-01

    An intervention study designed to investigate the effects of one hour of maternal and infant behavior was conducted using experimental and control groups of mothers and their infants with cerebral palsy. Ten mother-infant pairs were in each group; infants ranged in age from 8-32 months. Infants of mothers in the control group received one hour of NDT-based occupational therapy. Two-factor repeated measures analysis of variance with repeated measures of the second factor indicated that the nonverbal instruction methods were significantly more successful in modifying maternal and infant behavior than were the verbal instruction methods. Implications of the results for intervention programs and future research were discussed.

  18. Effects of a play program on creative thinking of preschool children.

    PubMed

    Garaigordobil, Maite; Berrueco, Laura

    2011-11-01

    The purpose of this study was to evaluate the effects of a play program in the creative thinking of preschool children. The study used a repeated measures experimental pretest-posttest design with control groups. The sample included 86 participants aged 5 to 6 years (53 experimental and 33 control participants). Before and after administering the program, two evaluation instruments were applied: The Torrance Test of Creative Thinking (Torrance, 1990) and Behaviors and Traits of Creative Personality Scale (Garaigordobil & Berrueco, 2007). The program consisted of a weekly 75-minute play session throughout the school year. ANOVA results showed that the program significantly increased the verbal creativity (fluency, flexibility, originality), graphic creativity (elaboration, fluency, originality), and behaviors and traits of creative personality. In the pretest phase, there were no differences in the creativity of boys and girls, and the program stimulated a similar level of change in both sexes. The discussion focuses on the importance of implementing creative programs with preschool children.

  19. Making an APPropriate Care Program for Indigenous Cardiac Disease: Customization of an Existing Cardiac Rehabilitation Program.

    PubMed

    Bradford, DanaKai; Hansen, David; Karunanithi, Mohan

    2015-01-01

    Cardiovascular disease is a major health problem for all Australians and is the leading cause of death in Aboriginal and Torres Strait Islanders. In 2010, more then 50% of all heart attack deaths were due to repeated events. Cardiac rehabilitation programs have been proven to be effective in preventing the recurrence of cardiac events and readmission to hospitals. There are however, many barriers to the use of these programs. To address these barriers, CSIRO developed an IT enabled cardiac rehabilitation program delivered by mobile phone through a smartphone app and succesfully trialed it in an urban general population. If these results can be replicated in Indigenous populations, the program has the potential to significantly improve life expectancy and help close the gap in health outcomes. The challenge described in this paper is customizing the existing cardiac health program to make it culturally relevant and suitable for Indigenous Australians living in urban and remote communities.

  20. Evaluation of a Specialized Yoga Program for Persons Admitted to a Complex Continuing Care Hospital: A Pilot Study

    PubMed Central

    Kuluski, Kerry; Bechsgaard, Gitte; Ridgway, Jennifer; Katz, Joel

    2016-01-01

    Introduction. The purpose of this study was to evaluate a specialized yoga intervention for inpatients in a rehabilitation and complex continuing care hospital. Design. Single-cohort repeated measures design. Methods. Participants (N = 10) admitted to a rehabilitation and complex continuing care hospital were recruited to participate in a 50–60 min Hatha Yoga class (modified for wheelchair users/seated position) once a week for eight weeks, with assigned homework practice. Questionnaires on pain (pain, pain interference, and pain catastrophizing), psychological variables (depression, anxiety, and experiences with injustice), mindfulness, self-compassion, and spiritual well-being were collected at three intervals: pre-, mid-, and post-intervention. Results. Repeated measures ANOVAs revealed a significant main effect of time indicating improvements over the course of the yoga program on the (1) anxiety subscale of the Hospital Anxiety and Depression Scale, F(2,18) = 4.74, p < .05, and η p 2 = .35, (2) Self-Compassion Scale-Short Form, F(2,18) = 3.71, p < .05, and η p 2 = .29, and (3) Magnification subscale of the Pain Catastrophizing Scale, F(2,18) = 3. 66, p < .05, and η p 2 = .29. Discussion. The results suggest that an 8-week Hatha Yoga program improves pain-related factors and psychological experiences in individuals admitted to a rehabilitation and complex continuing care hospital. PMID:28115969

Top