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Sample records for roots vladimir zitko

  1. Vladimir Dmitrievich Krivchenkov.

    NASA Astrophysics Data System (ADS)

    Saraeva, I. M.; Romanovskii, Yurii Mikhailovich; Borisov, Anatoly Viktorovich

    The book concerns the life and activity of one of the lecturers in Quantum Mechanics from the Physics Department of the Moscow State University Vladimir Dmitrievich Krivchenkov during 60-th- 70-th years of the XX-th century. A detailed biography and a list of publications has been given. A number of photographs from the personal archive and the faculty's archive is included. Some of the recollections about V.D. Krivchenkov are written by his colleagues: Kvasnikov,V.B. Braginskij, S.S . Gershtein, L.I. Ponomarev, A.E.Yunovich, A.I. Osipov, M.V. Chetkin, B.N. Zahar'ev, I.F. Ginzburg, G.L. Kotkin, D.V. Belov, V.A. Gribov, P.V. Elyutin, S.A. Kirov, D.Yu Kuznetsov.

  2. Congratulations to Vladimir Igorevich Arnol'd

    NASA Astrophysics Data System (ADS)

    2007-06-01

    12 June 2007 was the seventieth birthday of a member of the editorial board of this journal, Academician Vladimir Igorevich Arnol'd. We warmly congratulate Vladimir Igorevich on his birthday and wish him good health, happiness and continuing success in his scientific activities.

  3. Life and death of Vladimir Mikhailovich Bekhterev.

    PubMed

    Maranhão Filho, Péricles; Maranhão, Eliana Teixeira; Engelhardt, Eliasz

    2015-11-01

    Vladimir Mikhailovich Bekhterev was a Russian innovative neuroscientist, extraordinary in the study, diagnosis, and research in the fields of neurology, psychology, morphology, physiology, and psychiatry. Considering the ample and multifaceted scientific feats, only some are touched in a very brief manner. However, it is necessary to highlight his contributions to neurology, with the description of structures, signs and syndromes, to physiology, including reflexology, which later underpinned behaviorism, to psychology, including objective psychology and suggestion. His accomplishments and legacy remained until the present days. Some comments about the scenery that involved his death are also presented. PMID:26517221

  4. Vladimir I. Keilis-Borok (1921-2013)

    NASA Astrophysics Data System (ADS)

    Gabrielov, Andrei; Levshin, Anatoli; Newman, William I.

    2014-03-01

    Vladimir Isaakovich Keilis-Borok, emeritus Professor in Residence of Geophysics at the University of California, Los Angeles (UCLA), passed away on 19 October 2013, following a long illness. He was born on 31 July 1921 in Moscow.

  5. Epidemiology of Primary Multidrug-Resistant Tuberculosis, Vladimir Region, Russia.

    PubMed

    Ershova, Julia V; Volchenkov, Grigory V; Kaminski, Dorothy A; Somova, Tatiana R; Kuznetsova, Tatiana A; Kaunetis, Natalia V; Cegielski, J Peter; Kurbatova, Ekaterina V

    2015-11-01

    We studied the epidemiology of drug-resistant tuberculosis (TB) in Vladimir Region, Russia, in 2012. Most cases of multidrug-resistant TB (MDR TB) were caused by transmission of drug-resistant strains, and >33% were in patients referred for testing after mass radiographic screening. Early diagnosis of drug resistance is essential for preventing transmission of MDR TB. PMID:26488585

  6. Epidemiology of Primary Multidrug-Resistant Tuberculosis, Vladimir Region, Russia

    PubMed Central

    Volchenkov, Grigory V.; Kaminski, Dorothy A.; Somova, Tatiana R.; Kuznetsova, Tatiana A.; Kaunetis, Natalia V.; Cegielski, J. Peter; Kurbatova, Ekaterina V.

    2015-01-01

    We studied the epidemiology of drug-resistant tuberculosis (TB) in Vladimir Region, Russia, in 2012. Most cases of multidrug-resistant TB (MDR TB) were caused by transmission of drug-resistant strains, and >33% were in patients referred for testing after mass radiographic screening. Early diagnosis of drug resistance is essential for preventing transmission of MDR TB. PMID:26488585

  7. Epidemiology of Primary Multidrug-Resistant Tuberculosis, Vladimir Region, Russia.

    PubMed

    Ershova, Julia V; Volchenkov, Grigory V; Kaminski, Dorothy A; Somova, Tatiana R; Kuznetsova, Tatiana A; Kaunetis, Natalia V; Cegielski, J Peter; Kurbatova, Ekaterina V

    2015-11-01

    We studied the epidemiology of drug-resistant tuberculosis (TB) in Vladimir Region, Russia, in 2012. Most cases of multidrug-resistant TB (MDR TB) were caused by transmission of drug-resistant strains, and >33% were in patients referred for testing after mass radiographic screening. Early diagnosis of drug resistance is essential for preventing transmission of MDR TB.

  8. Interview with Vladimir P Torchilin: liposomal carriers for drug delivery.

    PubMed

    Torchilin, Vladimir P

    2013-05-01

    Vladimir P Torchilin is a University Distinguished Professor and Director at the Center for Pharmaceutical Biotechnology and Nanomedicine at the School of Pharmacy, Northeastern University (MA, USA). He has published over 350 original research papers and among many other awards was the recent recipient of the 2012 Bangham Award, for his contributions to the study of liposomes. Professor Torchilin spoke to Therapeutic Delivery about the progress and challenges of the field of liposomal carriers for drug delivery as well as his own career in science to date. Interview conducted by James Potticary, Assistant Commissioning Editor. PMID:23647271

  9. Rapidity: The Special Relativity Work of Dr. Vladimir Karapetoff

    NASA Astrophysics Data System (ADS)

    Carter, Hamilton

    2014-03-01

    Between 1924 and 1944 Dr. Vladimir Karapetoff, a professor in the electrical engineering department of Cornell University, authored 11 papers on the topic of special relativity. While his initial papers focused on the then popular oblique angle treatment of special relativity, he soon became a vocal proponent of performing special relativistic calculations using rapidity, a technique that emphasizes the hyperbolic geometric nature of Minkowski space-time. While rapidity has fallen out of usage with the exception of a specialized dialect within particle physics, it offers interesting technical and pedagogical perspectives on the geometrical nature of space-time not evident in the present day relativistic parlance.

  10. On a celestial occurrence recorded in the hagiography of St. Vladimir

    NASA Astrophysics Data System (ADS)

    Banjević, Boris

    2002-04-01

    There were recorded a number of celestial occurrences in Serbian early history. Amongst them are a few appearances of comets. One except from Bible bearing on life of king David, relating to a phenomenon that might be interpreted as a comet, is in some way similar to the quotation from the hagiography of St. Vladimir. There is possibility that Halley's comet was observed at some time. This affects the chronology of the reign of St. Vladimir by about 11 years. This author thinks that it was in the summer 989 AD.

  11. [Vladimir Zederbaum" (1883-1942): Physician, journalist, contributor to the Russian "Jewish, Encyclopedia". A research report].

    PubMed

    Antipova, Anastasia

    2015-01-01

    Vol. 15 o f the "Jewish Encyclopedia" (St. Petersburg 1908-1913) contains an article on Freud, signed by Vladimir Zederbaum. The data for the article were provided by Max Eitingon. This paper addresses the question of whether Zederbaum himself was Eitingon's contact. Several archives produced a lot of information about Zederbaum's medical and journalistic activities in St. Petersburg. However, to date no connection between the two men could be established. PMID:26939252

  12. [Vladimir Zederbaum" (1883-1942): Physician, journalist, contributor to the Russian "Jewish, Encyclopedia". A research report].

    PubMed

    Antipova, Anastasia

    2015-01-01

    Vol. 15 o f the "Jewish Encyclopedia" (St. Petersburg 1908-1913) contains an article on Freud, signed by Vladimir Zederbaum. The data for the article were provided by Max Eitingon. This paper addresses the question of whether Zederbaum himself was Eitingon's contact. Several archives produced a lot of information about Zederbaum's medical and journalistic activities in St. Petersburg. However, to date no connection between the two men could be established.

  13. The Analysis of Cumulative Influence of Factors of Environment on a State of Health of the Population of Vladimir Region

    PubMed Central

    Trifonova, Tatyana Anatolyevna; Shirkin, Leonid Alekseevich

    2015-01-01

    There was investigated the contribution of factors of environment to formation of health for adult population on indicators of mid-annual rates of growth/decrease of disease of system of blood circulation and of some interfaced nosology on an example of the population of Vladimir region. The differential criterion of primary disease of system of blood circulation is considered as an indicator, integrally reflecting degree of adaptation to environment conditions on population and suitable for construction short-term prognostic estimations. It is shown that business factors or the factors of a standard of living characterized by economic indicators, are leading risk factors in disease of system of blood circulation in Vladimir region which contribution is estimated by size of 38 %. With use of regressive equations were received look-ahead estimations of annual rates of primary disease of system of blood circulation. In the regional centre Vladimir was observed more intense situation on rates of disease of system of blood circulation, than in Vladimir region. PMID:25948468

  14. Further east: eutrophication as a major threat to the flora of Vladimir Oblast, Russia.

    PubMed

    Seregin, Alexey P

    2014-11-01

    Eutrophication remains a major threat to the flora of Western Europe despite measures to reduce nitrogen emissions. Although nutrient enrichment has been recorded for both inland waters and adjacent seas, there is almost no evidence from Russia for large-scale anthropogenic eutrophication of soils and its impact on terrestrial biota. I used the distribution grid data (337 grid squares, ca. 96 km(2)) on 1,384 vascular plants of Vladimir Oblast for two periods (1869-1999 vs. 2000-2012) to estimate the shifts in mean Ellenberg's indicator values for nitrogen and soil reaction. Decadal changes in the flora of acid sandy Meshchera Lowlands were observed directly during two grid surveys of 2002 and 2012 based on a coarser grid (50 squares, ca. 24 km(2)). Despite the spatial correlation of Ellenberg's indicator values for soil reaction and nitrogen, mean grid values for nitrogen are growing in areas with both acid and neutral soils. The changes in mean grid indicator values for nitrogen are caused by either local extinctions of species from nutrient-poor habitats or spread of nitrophilous plants. I found that oligotrophic habitats are declining rapidly within the eutrophic loamy landscapes. In contrast, changes in landscapes with acid sandy soils are caused by increasing number of records of nitrophilous species, both invasive and native. These two processes have different spatial patterns caused by varying levels of geochemical buffer capacity and should be considered separately. Fragmentary historical data on Vladimir Oblast flora agrees with the overall European picture of eutrophication in the twentieth century.

  15. [To the 100th anniversary of Vladimir Pavlovich Efroimson (1908-1989)].

    PubMed

    2008-10-01

    Professor Vladimir Pavlovich Efroimson is one of the most prominent Russian geneticists, a former student of N.K. Kolt'tsov, who was among the geneticists that had to struggle against the presecution of genetics in the Soviet Union. Efroimson has discovered the formula of mutation rate in human (1932). He was a laeding specialist in genetics and breeding of silkworm and defended his condidate (1941) and doctoral (1947) dissertations on the subiect. He wrote the first Russian monograph on genetics The Introduction to Medical Genetics (1964)--the book that triddered the revival of human genetics in the Soviet Union. Efroimson was a veteran of the World War II, he fought in the army in 1941 through 1945 and was awarded military decorations. He was presecuted two times in 1932 ans 1949. Efroimson spent 10 years in Gulag and for 25 years was banned from scientific work. He was the autor of three monographs and over 100 scientific papers and the editor of many books on different issues of genetics. Efroimson entered the annals of Russian science as an outstsnding researcher, but also as an inblinking fighter for the truth, an uncompromising opponent of antiscientific directions in biology, an ardent advocate of genetics and the moral standart of a true scientist.

  16. [To the 100th anniversary of Vladimir Pavlovich Efroimson (1908-1989)].

    PubMed

    2008-10-01

    Professor Vladimir Pavlovich Efroimson is one of the most prominent Russian geneticists, a former student of N.K. Kolt'tsov, who was among the geneticists that had to struggle against the presecution of genetics in the Soviet Union. Efroimson has discovered the formula of mutation rate in human (1932). He was a laeding specialist in genetics and breeding of silkworm and defended his condidate (1941) and doctoral (1947) dissertations on the subiect. He wrote the first Russian monograph on genetics The Introduction to Medical Genetics (1964)--the book that triddered the revival of human genetics in the Soviet Union. Efroimson was a veteran of the World War II, he fought in the army in 1941 through 1945 and was awarded military decorations. He was presecuted two times in 1932 ans 1949. Efroimson spent 10 years in Gulag and for 25 years was banned from scientific work. He was the autor of three monographs and over 100 scientific papers and the editor of many books on different issues of genetics. Efroimson entered the annals of Russian science as an outstsnding researcher, but also as an inblinking fighter for the truth, an uncompromising opponent of antiscientific directions in biology, an ardent advocate of genetics and the moral standart of a true scientist. PMID:19062527

  17. Root Hairs

    PubMed Central

    Grierson, Claire; Nielsen, Erik; Ketelaarc, Tijs; Schiefelbein, John

    2014-01-01

    Roots hairs are cylindrical extensions of root epidermal cells that are important for acquisition of nutrients, microbe interactions, and plant anchorage. The molecular mechanisms involved in the specification, differentiation, and physiology of root hairs in Arabidopsis are reviewed here. Root hair specification in Arabidopsis is determined by position-dependent signaling and molecular feedback loops causing differential accumulation of a WD-bHLH-Myb transcriptional complex. The initiation of root hairs is dependent on the RHD6 bHLH gene family and auxin to define the site of outgrowth. Root hair elongation relies on polarized cell expansion at the growing tip, which involves multiple integrated processes including cell secretion, endomembrane trafficking, cytoskeletal organization, and cell wall modifications. The study of root hair biology in Arabidopsis has provided a model cell type for insights into many aspects of plant development and cell biology. PMID:24982600

  18. Precipitation and dissolution of calcium carbonate: key processes bridging the bio- and geosciences (Vladimir Ivanovich Vernadsky Medal Lecture)

    NASA Astrophysics Data System (ADS)

    Gattuso, J.-P.

    2012-04-01

    In this Vladimir Ivanovich Vernadsky medal lecture, I will focus on the biogeochemical cycle of calcium carbonate (CaCO3) which is arguably one of the best example of a set processes that bridge the bio- and geosciences. The main reactions involved are calcification and dissolution that, respectively, manufacture and destroy calcium carbonate. Biology is intimately involved in these two processes which are key controls of the Earth's climate and leave remains that are of great use to human societies (as building materials) and geoscientists. I will illustrate the bridge between the bio- and geosciences by providing brief examples for each of the following four issues. (1) The marine cycle of CaCO3 and its relationship with climate. The release of CO2 by the precipitation of calcium carbonate and the uptake of CO2 by its dissolution are important controls of atmospheric CO2 and climate. The vertical distribution of Ψ, the ratio of CO2 released/used per CaCO3 precipitated/dissolved in the ocean will be shown to be consistent with the Högbom-Urey reactions. (2) The use of CaCO3 in paleooceanography. The remains of calcium carbonate shells and skeletons are wonderful archives of past environmental changes. Their isotopic composition and the concen-tration of trace elements are invaluable in the reconstruction of past climate. I will address the challenge of calibrating one of the proxies used to reconstruct past ocean pH. (3) The challenge of understanding calcification. Despite having been investigated for decades, many aspects of the physiological and molecular processes involved in calcification by marine organisms remain obscure. Recent breakthroughs, mostly on reef-building corals, will be briefly reviewed. (4) The response of calcification and dissolution to environmental change. The critical importance of CaCO3 precipitation and dissolution as climate controls makes it vital to understand their response to global environmental changes such as ocean warming and

  19. Automated Root Tracking with "Root System Analyzer"

    NASA Astrophysics Data System (ADS)

    Schnepf, Andrea; Jin, Meina; Ockert, Charlotte; Bol, Roland; Leitner, Daniel

    2015-04-01

    Crucial factors for plant development are water and nutrient availability in soils. Thus, root architecture is a main aspect of plant productivity and needs to be accurately considered when describing root processes. Images of root architecture contain a huge amount of information, and image analysis helps to recover parameters describing certain root architectural and morphological traits. The majority of imaging systems for root systems are designed for two-dimensional images, such as RootReader2, GiA Roots, SmartRoot, EZ-Rhizo, and Growscreen, but most of them are semi-automated and involve mouse-clicks in each root by the user. "Root System Analyzer" is a new, fully automated approach for recovering root architectural parameters from two-dimensional images of root systems. Individual roots can still be corrected manually in a user interface if required. The algorithm starts with a sequence of segmented two-dimensional images showing the dynamic development of a root system. For each image, morphological operators are used for skeletonization. Based on this, a graph representation of the root system is created. A dynamic root architecture model helps to determine which edges of the graph belong to an individual root. The algorithm elongates each root at the root tip and simulates growth confined within the already existing graph representation. The increment of root elongation is calculated assuming constant growth. For each root, the algorithm finds all possible paths and elongates the root in the direction of the optimal path. In this way, each edge of the graph is assigned to one or more coherent roots. Image sequences of root systems are handled in such a way that the previous image is used as a starting point for the current image. The algorithm is implemented in a set of Matlab m-files. Output of Root System Analyzer is a data structure that includes for each root an identification number, the branching order, the time of emergence, the parent

  20. Root gravitropism

    NASA Technical Reports Server (NTRS)

    Masson, P. H.

    1995-01-01

    When a plant root is reoriented within the gravity field, it responds by initiating a curvature which eventually results in vertical growth. Gravity sensing occurs primarily in the root tip. It may involve amyloplast sedimentation in the columella cells of the root cap, or the detection of forces exerted by the mass of the protoplast on opposite sides of its cell wall. Gravisensing activates a signal transduction cascade which results in the asymmetric redistribution of auxin and apoplastic Ca2+ across the root tip, with accumulation at the bottom side. The resulting lateral asymmetry in Ca2+ and auxin concentration is probably transmitted to the elongation zone where differential cellular elongation occurs until the tip resumes vertical growth. The Cholodny-Went theory proposes that gravity-induced auxin redistribution across a gravistimulated plant organ is responsible for the gravitropic response. However, recent data indicate that the gravity-induced reorientation is more complex, involving both auxin gradient-dependent and auxin gradient-independent events.

  1. Root canal

    MedlinePlus

    Endodontic therapy ... the root of a tooth. Generally, there is pain and swelling in the area. The infection can ... You may have some pain or soreness after the procedure. An over-the-counter anti-inflammatory drug, such as ibuprofen or naproxen, can help relieve ...

  2. Root responses to flooding.

    PubMed

    Sauter, Margret

    2013-06-01

    Soil water-logging and submergence pose a severe threat to plants. Roots are most prone to flooding and the first to suffer from oxygen shortage. Roots are vital for plant function, however, and maintenance of a functional root system upon flooding is essential. Flooding-resistant plants possess a number of adaptations that help maintain oxygen supply to the root. Plants are also capable of initiating organogenesis to replace their original root system with adventitious roots if oxygen supply becomes impossible. This review summarizes current findings on root development and de novo root genesis in response to flooding.

  3. The Root Pressure Phenomenon

    ERIC Educational Resources Information Center

    Marsh, A. R.

    1972-01-01

    Describes experiments demonstrating that root pressure in plants is probably controlled by a circadian rhythm (biological clock). Root pressure phenomenon plays significant part in water transport in contradiction with prevalent belief. (PS)

  4. Using Square Roots

    ERIC Educational Resources Information Center

    Wilson, William Wynne

    1976-01-01

    This article describes techniques which enable the user of a comparatively simple calculator to perform calculations of cube roots, nth roots, trigonometric, and inverse trigonometric functions, logarithms, and exponentials. (DT)

  5. Discrete square root smoothing.

    NASA Technical Reports Server (NTRS)

    Kaminski, P. G.; Bryson, A. E., Jr.

    1972-01-01

    The basic techniques applied in the square root least squares and square root filtering solutions are applied to the smoothing problem. Both conventional and square root solutions are obtained by computing the filtered solutions, then modifying the results to include the effect of all measurements. A comparison of computation requirements indicates that the square root information smoother (SRIS) is more efficient than conventional solutions in a large class of fixed interval smoothing problems.

  6. Corky root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Corky root rot (corchosis) was first reported in Argentina in 1985, but the disease was presumably present long before that. The disease occurs in most alfalfa-growing areas of Argentina but is more common in older stands. In space-planted alfalfa trials scored for root problems, corky root rot was ...

  7. WHY ROOTING FAILS.

    SciTech Connect

    CREUTZ,M.

    2007-07-30

    I explore the origins of the unphysical predictions from rooted staggered fermion algorithms. Before rooting, the exact chiral symmetry of staggered fermions is a flavored symmetry among the four 'tastes.' The rooting procedure averages over tastes of different chiralities. This averaging forbids the appearance of the correct 't Hooft vertex for the target theory.

  8. Rooting Gene Trees without Outgroups: EP Rooting

    PubMed Central

    Sinsheimer, Janet S.; Little, Roderick J. A.; Lake, James A.

    2012-01-01

    Gene sequences are routinely used to determine the topologies of unrooted phylogenetic trees, but many of the most important questions in evolution require knowing both the topologies and the roots of trees. However, general algorithms for calculating rooted trees from gene and genomic sequences in the absence of gene paralogs are few. Using the principles of evolutionary parsimony (EP) (Lake JA. 1987a. A rate-independent technique for analysis of nucleic acid sequences: evolutionary parsimony. Mol Biol Evol. 4:167–181) and its extensions (Cavender, J. 1989. Mechanized derivation of linear invariants. Mol Biol Evol. 6:301–316; Nguyen T, Speed TP. 1992. A derivation of all linear invariants for a nonbalanced transversion model. J Mol Evol. 35:60–76), we explicitly enumerate all linear invariants that solely contain rooting information and derive algorithms for rooting gene trees directly from gene and genomic sequences. These new EP linear rooting invariants allow one to determine rooted trees, even in the complete absence of outgroups and gene paralogs. EP rooting invariants are explicitly derived for three taxon trees, and rules for their extension to four or more taxa are provided. The method is demonstrated using 18S ribosomal DNA to illustrate how the new animal phylogeny (Aguinaldo AMA et al. 1997. Evidence for a clade of nematodes, arthropods, and other moulting animals. Nature 387:489–493; Lake JA. 1990. Origin of the metazoa. Proc Natl Acad Sci USA 87:763–766) may be rooted directly from sequences, even when they are short and paralogs are unavailable. These results are consistent with the current root (Philippe H et al. 2011. Acoelomorph flatworms are deuterostomes related to Xenoturbella. Nature 470:255–260). PMID:22593551

  9. Deep rooting in winter wheat: rooting nodes of deep roots in two cultivars with deep and shallow root systems.

    PubMed

    Araki, H; Iijima, M

    2001-09-01

    Deep rooting of wheat has been suggested that it influences the tolerance to various environmental stresses. In this study, the nodes from which the deepest penetrated roots had emerged were examined in winter wheat. The wheat was grown in long tubes with or without mechanical stress and in large root boxes. The length and growth angle of each axile root were examined to analyze the difference in the vertical distribution of the roots between the two wheat cultivars, one with a deep and one with a shallow root system. In Shiroganekomugi, a Japanese winter wheat cultivar with a shallow root system, the rooting depths of the seminal and nodal roots decreased as the rooting nodes advanced acropetally. Six out of nine deepest roots were seminal root in the non-mechanical stress conditions. In Mutsubenkei, a Japanese winter wheat cultivar with a deep root system, grown in root boxes, not only the seminal roots but also the coleoptilar and the first nodal roots penetrated to a depth of more than 1.3 m in the root box, and became the deepest roots. In both cultivars, the seminal roots became the deepest roots under the mechanical stress conditions. There were no clear tendencies in the root growth angles among the rooting nodes in the wheat root system. This indicates that the length of the axile roots can explain the differences in the rooting depths among axile roots in a wheat root system. On the other hand, the axile roots of Mutsubenkei elongated significantly more vertically than those of Shiroganekomugi. This suggests that not only seminal but also nodal roots exhibit strong positive gravitropism and penetrate deeply in a cultivar with a deep root system. In wheat cultivars, it is likely that the extent of its Root Depth Index results partly from the gravitropic responses of both seminal and nodal roots.

  10. Root canal irrigants

    PubMed Central

    Kandaswamy, Deivanayagam; Venkateshbabu, Nagendrababu

    2010-01-01

    Successful root canal therapy relies on the combination of proper instrumentation, irrigation, and obturation of the root canal. Of these three essential steps of root canal therapy, irrigation of the root canal is the most important determinant in the healing of the periapical tissues. The primary endodontic treatment goal must thus be to optimize root canal disinfection and to prevent reinfection. In this review of the literature, various irrigants and the interactions between irrigants are discussed. We performed a Medline search for English-language papers published untill July 2010. The keywords used were ‘root canal irrigants’ and ‘endodontic irrigants.’ The reference lists of each article were manually checked for additional articles of relevance. PMID:21217955

  11. Irrational Square Roots

    ERIC Educational Resources Information Center

    Misiurewicz, Michal

    2013-01-01

    If students are presented the standard proof of irrationality of [square root]2, can they generalize it to a proof of the irrationality of "[square root]p", "p" a prime if, instead of considering divisibility by "p", they cling to the notions of even and odd used in the standard proof?

  12. Trees and Roots.

    ERIC Educational Resources Information Center

    Jones, Lethonee A.

    Constructing a family history can be significant in helping persons understand and appreciate the root system that supports and sustains them. Oral history can be a valuable resource in family research as Alex Haley demonstrated in writing "Roots." The major difficulty of using oral tradition in tracing a family history is that family members with…

  13. Root Nutrient Foraging1

    PubMed Central

    Giehl, Ricardo F.H.; von Wirén, Nicolaus

    2014-01-01

    During a plant's lifecycle, the availability of nutrients in the soil is mostly heterogeneous in space and time. Plants are able to adapt to nutrient shortage or localized nutrient availability by altering their root system architecture to efficiently explore soil zones containing the limited nutrient. It has been shown that the deficiency of different nutrients induces root architectural and morphological changes that are, at least to some extent, nutrient specific. Here, we highlight what is known about the importance of individual root system components for nutrient acquisition and how developmental and physiological responses can be coupled to increase nutrient foraging by roots. In addition, we review prominent molecular mechanisms involved in altering the root system in response to local nutrient availability or to the plant's nutritional status. PMID:25082891

  14. Mandibular first molar with single root and single root canal

    PubMed Central

    Munavalli, Anil; Kambale, Sharnappa; Ramesh, Sachhi; Ajgaonkar, Nishant

    2015-01-01

    Mandibular molars demonstrate considerable anatomic complexities and abnormalities with respect to number of roots and root canals. Clinicians should be aware that there is a possibility of the existence of a fewer number of roots and root canals than the normal root canal anatomy. Mandibular first molar with a single root and single canal was diagnosed with the aid of dental operating microscope and multiple angled radiographs. This case report presents a rare case of successful endodontic management of mandibular first molar with a single root and root canal. PMID:26180424

  15. Root hydrotropism: an update.

    PubMed

    Cassab, Gladys I; Eapen, Delfeena; Campos, María Eugenia

    2013-01-01

    While water shortage remains the single-most important factor influencing world agriculture, there are very few studies on how plants grow in response to water potential, i.e., hydrotropism. Terrestrial plant roots dwell in the soil, and their ability to grow and explore underground requires many sensors for stimuli such as gravity, humidity gradients, light, mechanical stimulations, temperature, and oxygen. To date, extremely limited information is available on the components of such sensors; however, all of these stimuli are sensed in the root cap. Directional growth of roots is controlled by gravity, which is fixed in direction and intensity. However, other environmental factors, such as water potential gradients, which fluctuate in time, space, direction, and intensity, can act as a signal for modifying the direction of root growth accordingly. Hydrotropism may help roots to obtain water from the soil and at the same time may participate in the establishment of the root system. Current genetic analysis of hydrotropism in Arabidopsis has offered new players, mainly AHR1, NHR1, MIZ1, and MIZ2, which seem to modulate how root caps sense and choose to respond hydrotropically as opposed to other tropic responses. Here we review the mechanism(s) by which these genes and the plant hormones abscisic acid and cytokinins coordinate hydrotropism to counteract the tropic responses to gravitational field, light or touch stimuli. The biological consequence of hydrotropism is also discussed in relation to water stress avoidance.

  16. Economic strategies of plant absorptive roots vary with root diameter

    NASA Astrophysics Data System (ADS)

    Kong, D. L.; Wang, J. J.; Kardol, P.; Wu, H. F.; Zeng, H.; Deng, X. B.; Deng, Y.

    2016-01-01

    Plant roots typically vary along a dominant ecological axis, the root economics spectrum, depicting a tradeoff between resource acquisition and conservation. For absorptive roots, which are mainly responsible for resource acquisition, we hypothesized that root economic strategies differ with increasing root diameter. To test this hypothesis, we used seven plant species (a fern, a conifer, and five angiosperms from south China) for which we separated absorptive roots into two categories: thin roots (thickness of root cortex plus epidermis < 247 µm) and thick roots. For each category, we analyzed a range of root traits related to resource acquisition and conservation, including root tissue density, different carbon (C), and nitrogen (N) fractions (i.e., extractive, acid-soluble, and acid-insoluble fractions) as well as root anatomical traits. The results showed significant relationships among root traits indicating an acquisition-conservation tradeoff for thin absorptive roots while no such trait relationships were found for thick absorptive roots. Similar results were found when reanalyzing data of a previous study including 96 plant species. The contrasting economic strategies between thin and thick absorptive roots, as revealed here, may provide a new perspective on our understanding of the root economics spectrum.

  17. Quantitative measurements of root water uptake and root hydraulic conductivities

    NASA Astrophysics Data System (ADS)

    Zarebanadkouki, Mohsen; Javaux, Mathieu; Meunier, Felicien; Couvreur, Valentin; Carminati, Andrea

    2016-04-01

    How is root water uptake distributed along the root system and what root properties control this distribution? Here we present a method to: 1) measure root water uptake and 2) inversely estimate the root hydraulic conductivities. The experimental method consists in using neutron radiography to trace deuterated water (D2O) in soil and roots. The method was applied to lupines grown aluminium containers filled with a sandy soil. When the lupines were 4 weeks old, D2O was locally injected in a selected soil regions and its transport was monitored in soil and roots using time-series neutron radiography. By image processing, we quantified the concentration of D2O in soil and roots. We simulated the transport of D2O into roots using a diffusion-convection numerical model. The diffusivity of the roots tissue was inversely estimated by simulating the transport of D2O into the roots during night. The convective fluxes (i.e. root water uptake) were inversely estimating by fitting the experiments during day, when plants were transpiring, and assuming that root diffusivity did not change. The results showed that root water uptake was not uniform along the roots. Water uptake was higher at the proximal parts of the lateral roots and it decreased by a factor of 10 towards the distal parts. We used the data of water fluxes to inversely estimate the profile of hydraulic conductivities along the roots of transpiring plants growing in soil. The water fluxes in the lupine roots were simulated using the Hydraulic Tree Model by Doussan et al. (1998). The fitting parameters to be adjusted were the radial and axial hydraulic conductivities of the roots. The results showed that by using the root architectural model of Doussan et al. (1998) and detailed information of water fluxes into different root segments we could estimate the profile of hydraulic conductivities along the roots. We also found that: 1) in a tap-rooted plant like lupine water is mostly taken up by lateral roots; (2) water

  18. Reading with Roots

    ERIC Educational Resources Information Center

    Gibson, Margaret I.

    1986-01-01

    Recommends a method of teaching Russian vocabulary that focuses on new words in context and on their structure: root, prefix, suffix, sound changes, and borrowings. Sources for teachers are given in the bibliography. (LMO)

  19. Posterior meniscal root injuries

    PubMed Central

    Moatshe, Gilbert; Chahla, Jorge; Slette, Erik; Engebretsen, Lars; Laprade, Robert F

    2016-01-01

    Meniscal root tears (MRTs) are defined as radial tears within 1 cm of the meniscal root insertion, or an avulsion of the insertion of the meniscus. These injuries change joint loading due to failure of the meniscus to convert axial loads into hoop stresses, resulting in joint overloading and degenerative changes in the knee. Meniscal root repair is recommended in patients without advanced osteoarthritis (Outerbridge 3–4), in order to restore joint congruence and loading and therefore to avoid the long-term effect of joint overloading. Several techniques have been described. Improved knee function has been reported after meniscal root repair, but there are still conflicting reports on whether surgical treatment can prevent osteoarthritis. PMID:27347730

  20. Roots in plant ecology.

    PubMed

    Cody, M L

    1986-09-01

    In 1727 the pioneer vegetation scientist Stephen Hales realized that I much that was of importance to his subject material took place below on ground. A good deal of descriptive work on plant roots and root systems was done in the subsequent two centuries; in crop plants especially, the gross morphology of root systems was well known by the early 20th century. These descriptive studies were extended to natural grasslands by Weaver and his associates and to deserts by Cannon by the second decade of this century, but since that time the study of subterranean growth form appears to have lapsed, as a recent review by Kummerow indicates. Nevertheless, growth form is an important aspect of plant ecology, and subterranean growth form is especially relevant to the study of vegetation in and areas (which is the main subject of this commentary). Moreover, there is a real need for more research to be directed towards understanding plant root systems in general. PMID:21227785

  1. The phenomenology of rooting.

    PubMed

    Kerievsky, Bruce Stephen

    2010-09-01

    This paper examines the attractions of passionate involvement in wanting particular outcomes, which is popularly known as rooting. The author's lifelong personal experience is the source of his analysis, along with the insights provided by spiritual literature and especially the work of Dr. Thomas Hora, with whom the author studied for 30 years. The phrase "choiceless awareness," utilized by J. Krishnamurti, and attained via meditation, is seen as the means of transcending a rooting mode of being in the world.

  2. Root architecture impacts on root decomposition rates in switchgrass

    NASA Astrophysics Data System (ADS)

    de Graaff, M.; Schadt, C.; Garten, C. T.; Jastrow, J. D.; Phillips, J.; Wullschleger, S. D.

    2010-12-01

    Roots strongly contribute to soil organic carbon accrual, but the rate of soil carbon input via root litter decomposition is still uncertain. Root systems are built up of roots with a variety of different diameter size classes, ranging from very fine to very coarse roots. Since fine roots have low C:N ratios and coarse roots have high C:N ratios, root systems are heterogeneous in quality, spanning a range of different C:N ratios. Litter decomposition rates are generally well predicted by litter C:N ratios, thus decomposition of roots may be controlled by the relative abundance of fine versus coarse roots. With this study we asked how root architecture (i.e. the relative abundance of fine versus coarse roots) affects the decomposition of roots systems in the biofuels crop switchgrass (Panicum virgatum L.). To understand how root architecture affects root decomposition rates, we collected roots from eight switchgrass cultivars (Alamo, Kanlow, Carthage, Cave-in-Rock, Forestburg, Southlow, Sunburst, Blackwell), grown at FermiLab (IL), by taking 4.8-cm diameter soil cores from on top of the crown and directly next to the crown of individual plants. Roots were carefully excised from the cores by washing and analyzed for root diameter size class distribution using WinRhizo. Subsequently, root systems of each of the plants (4 replicates per cultivar) were separated in 'fine' (0-0.5 mm), 'medium' (0.5-1 mm) and 'coarse' roots (1-2.5 mm), dried, cut into 0.5 cm (medium and coarse roots) and 2 mm pieces (fine roots), and incubated for 90 days. For each of the cultivars we established five root-treatments: 20g of soil was amended with 0.2g of (1) fine roots, (2) medium roots, (3) coarse roots, (4) a 1:1:1 mixture of fine, medium and coarse roots, and (5) a mixture combining fine, medium and coarse roots in realistic proportions. We measured CO2 respiration at days 1, 3, 7, 15, 30, 60 and 90 during the experiment. The 13C signature of the soil was -26‰, and the 13C signature

  3. The "Green" Root Beer Laboratory

    ERIC Educational Resources Information Center

    Clary, Renee; Wandersee, James

    2010-01-01

    No, your students will not be drinking green root beer for St. Patrick's Day--this "green" root beer laboratory promotes environmental awareness in the science classroom, and provides a venue for some very sound science content! While many science classrooms incorporate root beer-brewing activities, the root beer lab presented in this article has…

  4. Glutamate signalling in roots.

    PubMed

    Forde, Brian G

    2014-03-01

    As a signalling molecule, glutamate is best known for its role as a fast excitatory neurotransmitter in the mammalian nervous system, a role that requires the activity of a family of ionotropic glutamate receptors (iGluRs). The unexpected discovery in 1998 that Arabidopsis thaliana L. possesses a family of iGluR-related (GLR) genes laid the foundations for an assessment of glutamate's potential role as a signalling molecule in plants that is still in progress. Recent advances in elucidating the function of Arabidopsis GLR receptors has revealed similarities with iGluRs in their channel properties, but marked differences in their ligand specificities. The ability of plant GLR receptors to act as amino-acid-gated Ca(2+) channels with a broad agonist profile, combined with their expression throughout the plant, makes them strong candidates for a multiplicity of amino acid signalling roles. Although root growth is inhibited in the presence of a number of amino acids, only glutamate elicits a specific sequence of changes in growth, root tip morphology, and root branching. The recent finding that the MEKK1 gene is a positive regulator of glutamate sensitivity at the root tip has provided genetic evidence for the existence in plants of a glutamate signalling pathway analogous to those found in animals. This short review will discuss the most recent advances in understanding glutamate signalling in roots, considering them in the context of previous work in plants and animals.

  5. Root architecture and root and tuber crop productivity.

    PubMed

    Villordon, Arthur Q; Ginzberg, Idit; Firon, Nurit

    2014-07-01

    It is becoming increasingly evident that optimization of root architecture for resource capture is vital for enabling the next green revolution. Although cereals provide half of the calories consumed by humans, root and tuber crops are the second major source of carbohydrates globally. Yet, knowledge of root architecture in root and tuber species is limited. In this opinion article, we highlight what is known about the root system in root and tuber crops, and mark new research directions towards a better understanding of the relation between root architecture and yield. We believe that unraveling the role of root architecture in root and tuber crop productivity will improve global food security, especially in regions with marginal soil fertility and low-input agricultural systems.

  6. Global Patterns of Vertical Root Distributions and Maximum Rooting Depths

    NASA Astrophysics Data System (ADS)

    Schenk, H. J.; Jackson, R. B.

    2001-05-01

    Plant roots are important pathways in global biogeochemical cycles. Roots transport water from the soil to the atmosphere and carbon from the atmosphere into the soil, redistribute nutrients and water in the soil profile, and contribute to the weathering of soil minerals. Data on the vertical distribution and maximum depths of roots in the soil profile are needed to quantify these and other processes. The global coverage of such root data is uneven, which makes it desirable to estimate global root distributions and maximum rooting depths from measurements of aboveground vegetation structure, soil parameters, and climatic variables. We analyzed root two databases compiled from the literature to determine the biotic and abiotic factors that influence vertical root distributions in global ecosystems and maximum rooting depths of individual plants. The first database included 520 vertical root profiles from 286 geographic locations. The second database included 1350 rooting depths for individual plants species from water-limited systems globally. Vertical root distributions were characterized by interpolated 50% and 95% rooting depths (the depths above which 50% or 95% of all roots are located). The 95% rooting depths increased with decreasing latitude from 80\\deg to 30\\deg, but showed no clear trend in the tropics. Mean annual evapotranspiration, precipitation, and length of the warm season were all positively correlated with rooting depths. Globally, more than 90% of all profiles had at least 50% of all roots in the upper 0.3 m of the soil profile (incl. organic horizons) and 95% of all roots in the upper 2 m. Deeper 50% and 95% rooting depths were mainly found in water-limited ecosystems. Median rooting depths of individual plants in water-limited ecosystems increased with increasing precipitation from less than 1 m in deserts with <50 mm of mean annual precipitation to about 2 m in climates with 650 to 750 mm mean annual precipitation. Maximum rooting depths were

  7. Wired to the roots

    PubMed Central

    Kumar, Amutha Sampath; Bais, Harsh P.

    2012-01-01

    Often, plant-pathogenic microbe interactions are discussed in a host-microbe two-component system, however very little is known about how the diversity of rhizospheric microbes that associate with plants affect host performance against pathogens. There are various studies, which specially direct the importance of induced systemic defense (ISR) response in plants interacting with beneficial rhizobacteria, yet we don’t know how rhizobacterial associations modulate plant physiology. In here, we highlight the many dimensions within which plant roots associate with beneficial microbes by regulating aboveground physiology. We review approaches to study the causes and consequences of plant root association with beneficial microbes on aboveground plant-pathogen interactions. The review provides the foundations for future investigations into the impact of the root beneficial microbial associations on plant performance and innate defense responses. PMID:23073006

  8. The Roots of Reading.

    ERIC Educational Resources Information Center

    Montoya, Colleen, Ed.

    2002-01-01

    This newsletter covers educational issues affecting schools in the Western Regional Educational Laboratory's 4-state region (Arizona, California, Nevada, and Utah) and nationwide. The following articles appear in the Volume 4, Number 1 issue: (1) "The Roots of Reading"; (2) "Breaking the Code: Reading Literacy in K-3"; (3) "Improving Secondary…

  9. Great Plains Roots.

    ERIC Educational Resources Information Center

    Frey, Jennifer

    2001-01-01

    Sandy White Hawk, Sicangu Lakota, was adopted by white missionaries as an infant and suffered child abuse. After 33 years, she found her birth family and formed First Nations Orphans Association, which uses songs and ceremonies to help adoptees return to their roots. Until the 1970s, federal agencies and welfare organizations facilitated removal…

  10. Advances in root reinforcement experiments

    NASA Astrophysics Data System (ADS)

    Giadrossich, Filippo; Schwarz, Massimiliano; Niedda, Marcello

    2013-04-01

    Root reinforcement is considered in many situations an important effect of vegetation for slope stability. In the past 20 years many studies analyzed root reinforcement in laboratory and field experiments, as well as through modeling frameworks. Nearby the important contribution of roots to shear strength, roots are recognized to impart stabilization also through lateral (parallel to slope) redistribution of forces under tension. Lateral root reinforcement under tensile solicitations (such as in the upper part of a shallow landslide) was documented and discussed by some studies. The most common method adopted to measure lateral root reinforcement are pullout tests where roots (single or as bundle) are pulled out from a soil matrix. These conditions are indeed representative for the case where roots within the mass of a landslide slip out from the upper stable part of the slope (such in a tension crack). However, there is also the situation where roots anchored at the upper stable part of the slope slip out from the sliding soil mass. In this last case it is difficult to quantify root reinforcement and no study discussed this mechanism so far. The main objective of this study is to quantify the contribution of roots considering the two presented cases of lateral root reinforcement discussed above - roots slipping out from stable soil profile or sliding soil matrix from anchored roots-, and discuss the implication of the results for slope stability modeling. We carried out a series of laboratory experiments for both roots pullout and soil sliding mechanisms using a tilting box with a bundle of 15 roots. Both Douglas (Pseudotsuga menziesii) roots and soil were collected from the study area in Sardinia (Italy), and reconstructed in laboratory, filling the root and soil layer by layer up to 0.4 meter thickness. The results show that the ratio between pullout force and force transferred to the root during soil sliding range from 0.5 to 1. This results indicate that

  11. Hairy roots are more sensitive to auxin than normal roots

    PubMed Central

    Shen, Wen Hui; Petit, Annik; Guern, Jean; Tempé, Jacques

    1988-01-01

    Responses to auxin of Lotus corniculatus root tips or protoplasts transformed by Agrobacterium rhizogenes strains 15834 and 8196 were compared to those of their normal counterparts. Three different types of experiments were performed, involving long-term, medium-term, or short-term responses to a synthetic auxin, 1-naphthaleneacetic acid. Root tip elongation, proton excretion by root tips, and transmembrane electrical potential difference of root protoplasts were measured as a function of exogenous auxin concentration. The sensitivity of hairy root tips or protoplasts to exogenous auxin was found to be 100-1000 times higher than that of untransformed material. PMID:16593928

  12. Aquaporins and root water relations

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Water is one of the most critical resources limiting plant growth and crop productivity, and root water uptake is an important aspect of plant physiology governing plant water use and stress tolerance. Pathways of root water uptake are complex and are affected by root structure and physiological res...

  13. Strigolactones Effects on Root Growth

    NASA Astrophysics Data System (ADS)

    Koltai, Hinanit

    2012-07-01

    Strigolactones (SLs) were defined as a new group of plant hormones that suppress lateral shoot branching. Our previous studies suggested SLs to be regulators of root development. SLs were shown to alter root architecture by regulating lateral root formation and to affect root hair elongation in Arabidopsis. Another important effect of SLs on root growth was shown to be associated with root directional growth. Supplementation of SLs to roots led to alterations in root directional growth, whereas associated mutants showed asymmetrical root growth, which was influenced by environmental factors. The regulation by SLs of root development was shown to be conducted via a cross talk of SLs with other plant hormones, including auxin. SLs were shown to regulate auxin transport, and to interfere with the activity of auxin-efflux carriers. Therefore, it might be that SLs are regulators of root directional growth as a result of their ability to regulated auxin transport. However, other evidences suggest a localized effect of SLs on cell division, which may not necessarily be associated with auxin efflux. These and other, recent hypothesis as to the SLs mode of action and the associated root perception and response to environmental factors will be discussed.

  14. Diagravitropism in corn roots.

    PubMed

    Leopold, A C; Wettlaufer, S H

    1988-01-01

    The diagravitropic behavior of Merit corn (Zea mays L.) roots grown in darkness provides an opportunity for comparison of two qualitatively different gravitropic systems. As with positive gravitropism, diagravitropism is shown to require the presence of the root cap, have a similar time course for the onset of curvature, and a similar presentation time. In contrast with positive gravitropism, diagravitropism appears to have a more limited requirement for calcium, for it is insensitive to the elution of calcium by EGTA and insensitive to the subsequent addition of a calcium/EGTA complex. These results are interpreted as indicating that whereas the same sensing system is shared by the two types of gravitropism, separate transductive systems are involved, one for diagravitropism, which is relatively independent of calcium, and one for positive gravitropism, which is markedly dependent on calcium.

  15. Springback in root gravitropism.

    PubMed

    Leopold, A C; Wettlaufer, S H

    1989-01-01

    Conditions under which a gravistimulus of Merit corn roots (Zea mays L.) is withdrawn result in a subsequent loss of gravitropic curvature, an effect which we refer to as springback.' This loss of curvature begins within 1 to 10 minutes after removal of the gravistimulus. It occurs regardless of the presence or absence of the root cap. It is insensitive to inhibitors of auxin transport (2,3,5-triiodobenzoic acid, naphthylphthalamic [correction of naphthylphthalmaic] acid) or to added auxin (2,4-dichlorophenoxyacetic acid). Springback is prevented if a clinostat treatment is interjected to neutralize gravistimulation during germination, which suggests that the change in curvature is a response to a memory' effect carried over from a prior gravistimulation. PMID:11537456

  16. Springback in root gravitropism

    NASA Technical Reports Server (NTRS)

    Leopold, A. C.; Wettlaufer, S. H.

    1989-01-01

    Conditions under which a gravistimulus of Merit corn roots (Zea mays L.) is withdrawn result in a subsequent loss of gravitropic curvature, an effect which we refer to as springback.' This loss of curvature begins within 1 to 10 minutes after removal of the gravistimulus. It occurs regardless of the presence or absence of the root cap. It is insensitive to inhibitors of auxin transport (2,3,5-triiodobenzoic acid, naphthylphthalamic [correction of naphthylphthalmaic] acid) or to added auxin (2,4-dichlorophenoxyacetic acid). Springback is prevented if a clinostat treatment is interjected to neutralize gravistimulation during germination, which suggests that the change in curvature is a response to a memory' effect carried over from a prior gravistimulation.

  17. Diagravitropism in corn roots

    NASA Technical Reports Server (NTRS)

    Leopold, A. C.; Wettlaufer, S. H.

    1988-01-01

    The diagravitropic behavior of Merit corn (Zea mays L.) roots grown in darkness provides an opportunity for comparison of two qualitatively different gravitropic systems. As with positive gravitropism, diagravitropism is shown to require the presence of the root cap, have a similar time course for the onset of curvature, and a similar presentation time. In contrast with positive gravitropism, diagravitropism appears to have a more limited requirement for calcium, for it is insensitive to the elution of calcium by EGTA and insensitive to the subsequent addition of a calcium/EGTA complex. These results are interpreted as indicating that whereas the same sensing system is shared by the two types of gravitropism, separate transductive systems are involved, one for diagravitropism, which is relatively independent of calcium, and one for positive gravitropism, which is markedly dependent on calcium.

  18. Root tips moving through soil

    PubMed Central

    Curlango-Rivera, Gilberto

    2011-01-01

    Root elongation occurs by the generation of new cells from meristematic tissue within the apical 1–2 mm region of root tips. Therefore penetration of the soil environment is carried out by newly synthesized plant tissue, whose cells are inherently vulnerable to invasion by pathogens. This conundrum, on its face, would seem to reflect an intolerable risk to the successful establishment of root systems needed for plant life. Yet root tip regions housing the meristematic tissues repeatedly have been found to be free of microbial infection and colonization. Even when spore germination, chemotaxis, and/or growth of pathogens are stimulated by signals from the root tip, the underlying root tissue can escape invasion. Recent insights into the functions of root border cells, and the regulation of their production by transient exposure to external signals, may shed light on long-standing observations. PMID:21455030

  19. Philosophical Roots of Cosmology

    NASA Astrophysics Data System (ADS)

    Ivanovic, M.

    2008-10-01

    We shall consider the philosophical roots of cosmology in the earlier Greek philosophy. Our goal is to answer the question: Are earlier Greek theories of pure philosophical-mythological character, as often philosophers cited it, or they have scientific character. On the bases of methodological criteria, we shall contend that the latter is the case. In order to answer the question about contemporary situation of the relation philosophy-cosmology, we shall consider the next question: Is contemporary cosmology completely independent of philosophical conjectures? The answer demands consideration of methodological character about scientific status of contemporary cosmology. We also consider some aspects of the relation contemporary philosophy-cosmology.

  20. The Roots of Beowulf

    NASA Technical Reports Server (NTRS)

    Fischer, James R.

    2014-01-01

    The first Beowulf Linux commodity cluster was constructed at NASA's Goddard Space Flight Center in 1994 and its origins are a part of the folklore of high-end computing. In fact, the conditions within Goddard that brought the idea into being were shaped by rich historical roots, strategic pressures brought on by the ramp up of the Federal High-Performance Computing and Communications Program, growth of the open software movement, microprocessor performance trends, and the vision of key technologists. This multifaceted story is told here for the first time from the point of view of NASA project management.

  1. Matching roots to their environment

    PubMed Central

    White, Philip J.; George, Timothy S.; Gregory, Peter J.; Bengough, A. Glyn; Hallett, Paul D.; McKenzie, Blair M.

    2013-01-01

    Background Plants form the base of the terrestrial food chain and provide medicines, fuel, fibre and industrial materials to humans. Vascular land plants rely on their roots to acquire the water and mineral elements necessary for their survival in nature or their yield and nutritional quality in agriculture. Major biogeochemical fluxes of all elements occur through plant roots, and the roots of agricultural crops have a significant role to play in soil sustainability, carbon sequestration, reducing emissions of greenhouse gasses, and in preventing the eutrophication of water bodies associated with the application of mineral fertilizers. Scope This article provides the context for a Special Issue of Annals of Botany on ‘Matching Roots to Their Environment’. It first examines how land plants and their roots evolved, describes how the ecology of roots and their rhizospheres contributes to the acquisition of soil resources, and discusses the influence of plant roots on biogeochemical cycles. It then describes the role of roots in overcoming the constraints to crop production imposed by hostile or infertile soils, illustrates root phenotypes that improve the acquisition of mineral elements and water, and discusses high-throughput methods to screen for these traits in the laboratory, glasshouse and field. Finally, it considers whether knowledge of adaptations improving the acquisition of resources in natural environments can be used to develop root systems for sustainable agriculture in the future. PMID:23821619

  2. Geophysical Imaging of Root Architecture and Root-soil Interaction

    NASA Astrophysics Data System (ADS)

    Wu, Y.; Dafflon, B.; Hubbard, S. S.

    2015-12-01

    Roots play a critical role in controlling water and nutrient uptake, soil biogeochemical processes, as well as the physical anchorage for plants. While important processes, such as root hydraulic redistribution for optimal growth and survival have been recognized, representation of roots in climate models, e.g. its carbon storage, carbon resilience, root biomass, and role in regulating water and carbon fluxes across the rhizosphere and atmosphere interface is still challenging. Such a challenge is exacerbated because of the large variations of root architecture and function across species and locations due to both genetic and environmental controls and the lack of methods for quantifying root mass, distribution, dynamics and interaction with soils at field scales. The scale, complexity and the dynamic nature of plant roots call for minimally invasive methods capable of providing quantitative estimation of root architecture, dynamics over time and interactions with the soils. We present a study on root architecture and root-soil interactions using geophysical methods. Parameters and processes of interests include (1) moisture dynamics around root zone and its interaction with plant transpiration and environmental controls and (2) estimation of root structure and properties based on geophysical signals. Both pot and field scale studies were conducted. The pot scale experiments were conducted under controlled conditions and were monitored with cross-well electrical resistivity tomography (ERT), TDR moisture sensors and temperature probes. Pots with and without a tree were compared and the moisture conditions were controlled via a self regulated pumping system. Geophysical monitoring revealed interactions between roots and soils under dynamic soil moisture conditions and the role of roots in regulating the response of the soil system to changes of environmental conditions, e.g. drought and precipitation events. Field scale studies were conducted on natural trees using

  3. Photophobic behavior of maize roots.

    PubMed

    Burbach, Christian; Markus, Katharina; Zhang, Yin; Schlicht, Markus; Baluška, František

    2012-07-01

    Primary roots of young maize seedlings showed peculiar growth behavior when challenged by placing them on a slope, or if whole seedlings were turned upside down. Importantly, this behavior was dependent on the light conditions. If roots were placed on slopes in the dark, they performed "crawling" behavior and advanced rapidly up the slope. However, as soon as these roots were illuminated, their crawling movements along their horizontal paths slowed down, and instead tried to grow downwards along the gravity vector. A similar light-induced switch in the root behavior was observed when roots were inverted, by placing them in thin glass capillaries. As long as they were kept in the darkness, they showed rapid growth against the gravity vector. If illuminated, these inverted roots rapidly accomplished U-turns and grew down along the gravity vector, eventually escaping from the capillaries upon reaching their open ends. De-capped roots, although growing vigorously, did not display these light-induced photophobic growth responses. We can conclude that intact root cap is essential for the photophobic root behavior in maize.

  4. Photophobic behavior of maize roots

    PubMed Central

    Burbach, Christian; Markus, Katharina; Zhang, Yin; Schlicht, Markus; Baluška, František

    2012-01-01

    Primary roots of young maize seedlings showed peculiar growth behavior when challenged by placing them on a slope, or if whole seedlings were turned upside down. Importantly, this behavior was dependent on the light conditions. If roots were placed on slopes in the dark, they performed “crawling” behavior and advanced rapidly up the slope. However, as soon as these roots were illuminated, their crawling movements along their horizontal paths slowed down, and instead tried to grow downwards along the gravity vector. A similar light-induced switch in the root behavior was observed when roots were inverted, by placing them in thin glass capillaries. As long as they were kept in the darkness, they showed rapid growth against the gravity vector. If illuminated, these inverted roots rapidly accomplished U-turns and grew down along the gravity vector, eventually escaping from the capillaries upon reaching their open ends. De-capped roots, although growing vigorously, did not display these light-induced photophobic growth responses. We can conclude that intact root cap is essential for the photophobic root behavior in maize. PMID:22751294

  5. Photophobic behavior of maize roots.

    PubMed

    Burbach, Christian; Markus, Katharina; Zhang, Yin; Schlicht, Markus; Baluška, František

    2012-07-01

    Primary roots of young maize seedlings showed peculiar growth behavior when challenged by placing them on a slope, or if whole seedlings were turned upside down. Importantly, this behavior was dependent on the light conditions. If roots were placed on slopes in the dark, they performed "crawling" behavior and advanced rapidly up the slope. However, as soon as these roots were illuminated, their crawling movements along their horizontal paths slowed down, and instead tried to grow downwards along the gravity vector. A similar light-induced switch in the root behavior was observed when roots were inverted, by placing them in thin glass capillaries. As long as they were kept in the darkness, they showed rapid growth against the gravity vector. If illuminated, these inverted roots rapidly accomplished U-turns and grew down along the gravity vector, eventually escaping from the capillaries upon reaching their open ends. De-capped roots, although growing vigorously, did not display these light-induced photophobic growth responses. We can conclude that intact root cap is essential for the photophobic root behavior in maize. PMID:22751294

  6. A Split-Root Technique for Measuring Root Water Potential

    PubMed Central

    Adeoye, Kingsley B.; Rawlins, Stephen L.

    1981-01-01

    Water encounters various resistances in moving along a path of decreasing potential energy from the soil through the plant to the atmosphere. The reported relative magnitudes of these pathway resistances vary widely and often these results are conflicting. One reason for such inconsistency is the difficulty in measuring the potential drop across various segments of the soil-plant-atmosphere continuum. The measurement of water potentials at the soil-root interface and in the root xylem of a transpiring plant remains a challenging problem. In the divided root experiment reported here, the measured water potential of an enclosed, nonabsorbing branch of the root system of young corn (Bonanza) plants to infer the water potential of the remaining roots growing in soil was used. The selected root branch of the seedling was grown in a specially constructed Teflon test tube into which a screen-enclosed thermocouple psychrometer was inserted and sealed to monitor the root's water potential. The root and its surrounding atmosphere were assumed to be in vapor equilibrium. Images PMID:16661886

  7. The roots of predictivism.

    PubMed

    Barnes, Eric Christian

    2014-03-01

    In The Paradox of Predictivism (2008, Cambridge University Press) I tried to demonstrate that there is an intimate relationship between predictivism (the thesis that novel predictions sometimes carry more weight than accommodations) and epistemic pluralism (the thesis that one important form of evidence in science is the judgments of other scientists). Here I respond to various published criticisms of some of the key points from Paradox from David Harker, Jarret Leplin, and Clark Glymour. Foci include my account of predictive novelty (endorsement novelty), the claim that predictivism has two roots, the prediction per se and predictive success, and my account of why Mendeleev's predictions carried special weight in confirming the Periodic Law of the Elements. PMID:24984449

  8. New roots for agriculture: exploiting the root phenome.

    PubMed

    Lynch, Jonathan P; Brown, Kathleen M

    2012-06-01

    Recent advances in root biology are making it possible to genetically design root systems with enhanced soil exploration and resource capture. These cultivars would have substantial value for improving food security in developing nations, where yields are limited by drought and low soil fertility, and would enhance the sustainability of intensive agriculture. Many of the phenes controlling soil resource capture are related to root architecture. We propose that a better understanding of the root phenome is needed to effectively translate genetic advances into improved crop cultivars. Elementary, unique root phenes need to be identified. We need to understand the 'fitness landscape' for these phenes: how they affect crop performance in an array of environments and phenotypes. Finally, we need to develop methods to measure phene expression rapidly and economically without artefacts. These challenges, especially mapping the fitness landscape, are non-trivial, and may warrant new research and training modalities.

  9. New roots for agriculture: exploiting the root phenome

    PubMed Central

    Lynch, Jonathan P.; Brown, Kathleen M.

    2012-01-01

    Recent advances in root biology are making it possible to genetically design root systems with enhanced soil exploration and resource capture. These cultivars would have substantial value for improving food security in developing nations, where yields are limited by drought and low soil fertility, and would enhance the sustainability of intensive agriculture. Many of the phenes controlling soil resource capture are related to root architecture. We propose that a better understanding of the root phenome is needed to effectively translate genetic advances into improved crop cultivars. Elementary, unique root phenes need to be identified. We need to understand the ‘fitness landscape’ for these phenes: how they affect crop performance in an array of environments and phenotypes. Finally, we need to develop methods to measure phene expression rapidly and economically without artefacts. These challenges, especially mapping the fitness landscape, are non-trivial, and may warrant new research and training modalities. PMID:22527403

  10. Compensatory Root Water Uptake of Overlapping Root Systems

    NASA Astrophysics Data System (ADS)

    Agee, E.; Ivanov, V. Y.; He, L.; Bisht, G.; Shahbaz, P.; Fatichi, S.; Gough, C. M.; Couvreur, V.; Matheny, A. M.; Bohrer, G.

    2015-12-01

    Land-surface models use simplified representations of root water uptake based on biomass distributions and empirical functions that constrain water uptake during unfavorable soil moisture conditions. These models fail to capture the observed hydraulic plasticity that allows plants to regulate root hydraulic conductivity and zones of active uptake based on local gradients. Recent developments in root water uptake modeling have sought to increase its mechanistic representation by bridging the gap between physically based microscopic models and computationally feasible macroscopic approaches. It remains to be demonstrated whether bulk parameterization of microscale characteristics (e.g., root system morphology and root conductivity) can improve process representation at the ecosystem scale. We employ the Couvreur method of microscopic uptake to yield macroscopic representation in a coupled soil-root model. Using a modified version of the PFLOTRAN model, which represents the 3-D physics of variably saturated soil, we model a one-hectare temperate forest stand under natural and synthetic climatic forcing. Our results show that as shallow soil layers dry, uptake at the tree and stand level shift to deeper soil layers, allowing the transpiration stream demanded by the atmosphere. We assess the potential capacity of the model to capture compensatory root water uptake. Further, the hydraulic plasticity of the root system is demonstrated by the quick response of uptake to rainfall pulses. These initial results indicate a promising direction for land surface models in which significant three-dimensional information from large root systems can be feasibly integrated into the forest scale simulations of root water uptake.

  11. Theon's Ladder for Any Root

    ERIC Educational Resources Information Center

    Osler, Thomas J.; Wright, Marcus; Orchard, Michael

    2005-01-01

    Theon's ladder is an ancient algorithm for calculating rational approximations for the square root of 2. It features two columns of integers (called a ladder), in which the ratio of the two numbers in each row is an approximation to the square root of 2. It is remarkable for its simplicity. This algorithm can easily be generalized to find rational…

  12. Project Work on Plant Roots.

    ERIC Educational Resources Information Center

    Devonald, V. G.

    1986-01-01

    Methods of investigating plant root growth developed for research purposes can be adopted for student use. Investigations of the effect of water table level and of ethylene concentration are described, and techniques of measuring root growth are explained. (Author/ML)

  13. Gut and Root Microbiota Commonalities

    PubMed Central

    Ramírez-Puebla, Shamayim T.; Servín-Garcidueñas, Luis E.; Jiménez-Marín, Berenice; Bolaños, Luis M.; Rosenblueth, Mónica; Martínez, Julio; Rogel, Marco Antonio; Ormeño-Orrillo, Ernesto

    2013-01-01

    Animal guts and plant roots have absorption roles for nutrient uptake and converge in harboring large, complex, and dynamic groups of microbes that participate in degradation or modification of nutrients and other substances. Gut and root bacteria regulate host gene expression, provide metabolic capabilities, essential nutrients, and protection against pathogens, and seem to share evolutionary trends. PMID:23104406

  14. Determinants and Polynomial Root Structure

    ERIC Educational Resources Information Center

    De Pillis, L. G.

    2005-01-01

    A little known property of determinants is developed in a manner accessible to beginning undergraduates in linear algebra. Using the language of matrix theory, a classical result by Sylvester that describes when two polynomials have a common root is recaptured. Among results concerning the structure of polynomial roots, polynomials with pairs of…

  15. Descendant root volume varies as a function of root type: estimation of root biomass lost during uprooting in Pinus pinaster.

    PubMed

    Danjon, Frédéric; Caplan, Joshua S; Fortin, Mathieu; Meredieu, Céline

    2013-01-01

    Root systems of woody plants generally display a strong relationship between the cross-sectional area or cross-sectional diameter (CSD) of a root and the dry weight of biomass (DWd) or root volume (Vd) that has grown (i.e., is descendent) from a point. Specification of this relationship allows one to quantify root architectural patterns and estimate the amount of material lost when root systems are extracted from the soil. However, specifications of this relationship generally do not account for the fact that root systems are comprised of multiple types of roots. We assessed whether the relationship between CSD and Vd varies as a function of root type. Additionally, we sought to identify a more accurate and time-efficient method for estimating missing root volume than is currently available. We used a database that described the 3D root architecture of Pinus pinaster root systems (5, 12, or 19 years) from a stand in southwest France. We determined the relationship between CSD and Vd for 10,000 root segments from intact root branches. Models were specified that did and did not account for root type. The relationships were then applied to the diameters of 11,000 broken root ends to estimate the volume of missing roots. CSD was nearly linearly related to the square root of Vd, but the slope of the curve varied greatly as a function of root type. Sinkers and deep roots tapered rapidly, as they were limited by available soil depth. Distal shallow roots tapered gradually, as they were less limited spatially. We estimated that younger trees lost an average of 17% of root volume when excavated, while older trees lost 4%. Missing volumes were smallest in the central parts of root systems and largest in distal shallow roots. The slopes of the curves for each root type are synthetic parameters that account for differentiation due to genetics, soil properties, or mechanical stimuli. Accounting for this differentiation is critical to estimating root loss accurately.

  16. Cassava root membrane proteome reveals activities during storage root maturation.

    PubMed

    Naconsie, Maliwan; Lertpanyasampatha, Manassawe; Viboonjun, Unchera; Netrphan, Supatcharee; Kuwano, Masayoshi; Ogasawara, Naotake; Narangajavana, Jarunya

    2016-01-01

    Cassava (Manihot esculenta Crantz) is one of the most important crops of Thailand. Its storage roots are used as food, feed, starch production, and be the important source for biofuel and biodegradable plastic production. Despite the importance of cassava storage roots, little is known about the mechanisms involved in their formation. This present study has focused on comparison of the expression profiles of cassava root proteome at various developmental stages using two-dimensional gel electrophoresis and LC-MS/MS. Based on an anatomical study using Toluidine Blue, the secondary growth was confirmed to be essential during the development of cassava storage root. To investigate biochemical processes occurring during storage root maturation, soluble and membrane proteins were isolated from storage roots harvested from 3-, 6-, 9-, and 12-month-old cassava plants. The proteins with differential expression pattern were analysed and identified to be associated with 8 functional groups: protein folding and degradation, energy, metabolism, secondary metabolism, stress response, transport facilitation, cytoskeleton, and unclassified function. The expression profiling of membrane proteins revealed the proteins involved in protein folding and degradation, energy, and cell structure were highly expressed during early stages of development. Integration of these data along with the information available in genome and transcriptome databases is critical to expand knowledge obtained solely from the field of proteomics. Possible role of identified proteins were discussed in relation with the activities during storage root maturation in cassava.

  17. Gravisensing in roots

    NASA Astrophysics Data System (ADS)

    Perbal, G.

    1999-01-01

    The mode of gravisensing in higher plants is not yet elucidated. Although, it is generally accepted that the amyloplasts (statoliths) in the root cap cells (statocytes) are responsible for susception of gravity. However, the hypothesis that the whole protoplast acts as gravisusceptor cannot be dismissed. The nature of the sensor that is able to transduce and amplify the mechanical energy into a biochemical factor is even more controversial. Several cell structures could potentially serve as gravireceptors: the endoplasmic reticulum, the actin network, the plasma membrane, or the cytoskeleton associated with this membrane. The nature of the gravisusceptors and gravisensors is discussed by taking into account the characteristics of the gravitropic reaction with respect to the presentation time, the threshold acceleration, the reciprocity rule, the deviation from the sine rule, the movement of the amyloplasts, the pre-inversion effect, the response of starch free and intermediate mutants and the effects of cytochalasin treatment. From this analysis, it can be concluded that both the amyloplasts and the protoplast could be the gravisusceptors, the former being more efficient than the latter since they can focus pressure on limited areas. The receptor should be located in the plasma membrane and could be a stretch-activated ion channel.

  18. Random root movements in weightlessness

    NASA Technical Reports Server (NTRS)

    Johnsson, A.; Karlsson, C.; Iversen, T. H.; Chapman, D. K.

    1996-01-01

    The dynamics of root growth was studied in weightlessness. In the absence of the gravitropic reference direction during weightlessness, root movements could be controlled by spontaneous growth processes, without any corrective growth induced by the gravitropic system. If truly random of nature, the bending behavior should follow so-called 'random walk' mathematics during weightlessness. Predictions from this hypothesis were critically tested. In a Spacelab ESA-experiment, denoted RANDOM and carried out during the IML-2 Shuttle flight in July 1994, the growth of garden cress (Lepidium sativum) roots was followed by time lapse photography at 1-h intervals. The growth pattern was recorded for about 20 h. Root growth was significantly smaller in weightlessness as compared to gravity (control) conditions. It was found that the roots performed spontaneous movements in weightlessness. The average direction of deviation of the plants consistently stayed equal to zero, despite these spontaneous movements. The average squared deviation increased linearly with time as predicted theoretically (but only for 8-10 h). Autocorrelation calculations showed that bendings of the roots, as determined from the 1-h photographs, were uncorrelated after about a 2-h interval. It is concluded that random processes play an important role in root growth. Predictions from a random walk hypothesis as to the growth dynamics could explain parts of the growth patterns recorded. This test of the hypothesis required microgravity conditions as provided for in a space experiment.

  19. Root development during soil genesis: effects of root-root interactions, mycorrhizae, and substrate

    NASA Astrophysics Data System (ADS)

    Salinas, A.; Zaharescu, D. G.

    2015-12-01

    A major driver of soil formation is the colonization and transformation of rock by plants and associated microbiota. In turn, substrate chemical composition can also influence the capacity for plant colonization and development. In order to better define these relationships, a mesocosm study was set up to analyze the effect mycorrhizal fungi, plant density and rock have on root development, and to determine the effect of root morphology on weathering and soil formation. We hypothesized that plant-plant and plant-fungi interactions have a stronger influence on root architecture and rock weathering than the substrate composition alone. Buffalo grass (Bouteloua dactyloides) was grown in a controlled environment in columns filled with either granular granite, schist, rhyolite or basalt. Each substrate was given two different treatments, including grass-microbes and grass-microbes-mycorrhizae and incubated for 120, 240, and 480 days. Columns were then extracted and analyzed for root morphology, fine fraction, and pore water major element content. Preliminary results showed that plants produced more biomass in rhyolite, followed by schist, basalt, and granite, indicating that substrate composition is an important driver of root development. In support of our hypothesis, mycorrhizae was a strong driver of root development by stimulating length growth, biomass production, and branching. However, average root length and branching also appeared to decrease in response to high plant density, though this trend was only present among roots with mycorrhizal fungi. Interestingly, fine fraction production was negatively correlated with average root thickness and volume. There is also slight evidence indicating that fine fraction production is more related to substrate composition than root morphology, though this data needs to be further analyzed. Our hope is that the results of this study can one day be applied to agricultural research in order to promote the production of crops

  20. Aluminum Toxicity in Roots 1

    PubMed Central

    Ryan, Peter R.; Shaff, Jon E.; Kochian, Leon V.

    1992-01-01

    The inhibition of root growth by aluminum (Al) is well established, yet a unifying mechanism for Al toxicity remains unclear. The association between cell growth and endogenously generated ionic currents measured in many different systems, including plant roots, suggests that these currents may be directing growth. A vibrating voltage microelectrode system was used to measure the net ionic currents at the apex of wheat (Triticum aestivum L.) roots from Al-tolerant and Al-sensitive cultivars. We examined the relationship between these currents and Al-induced inhibition of root growth. In the Al-sensitive cultivar, Scout 66, 10 micromolar Al (pH 4.5) began to inhibit the net current and root elongation within 1 to 3 hours. These changes occurred concurrently in 75% of experiments. A significant correlation was found between current magnitude and the rate of root growth when data were pooled. No changes in either current magnitude or growth rate were observed in similar experiments using the Al-tolerant cultivar Atlas 66. Measurements with ion-selective microelectrodes suggested that H+ influx was responsible for most of the current at the apex, with smaller contributions from Ca2+ and Cl− fluxes. In 50% of experiments, Al began to inhibit the net H+ influx in Scott 66 roots at the same time that growth was affected. However, in more than 25% of cases, Al-induced inhibition of growth rate occurred before any sustained decrease in the current or H+ flux. Although showing a correlation between growth and current or H+ fluxes, these data do not suggest a mechanistic association between these processes. We conclude that the inhibition of root growth by Al is not caused by the reduction in current or H+ influx at the root apex. PMID:16668988

  1. Hypocotyl adventitious root organogenesis differs from lateral root development

    PubMed Central

    Verstraeten, Inge; Schotte, Sébastien; Geelen, Danny

    2014-01-01

    Wound-induced adventitious root (AR) formation is a requirement for plant survival upon root damage inflicted by pathogen attack, but also during the regeneration of plant stem cuttings for clonal propagation of elite plant varieties. Yet, adventitious rooting also takes place without wounding. This happens for example in etiolated Arabidopsis thaliana hypocotyls, in which AR initiate upon de-etiolation or in tomato seedlings, in which AR initiate upon flooding or high water availability. In the hypocotyl AR originate from a cell layer reminiscent to the pericycle in the primary root (PR) and the initiated AR share histological and developmental characteristics with lateral roots (LRs). In contrast to the PR however, the hypocotyl is a determinate structure with an established final number of cells. This points to differences between the induction of hypocotyl AR and LR on the PR, as the latter grows indeterminately. The induction of AR on the hypocotyl takes place in environmental conditions that differ from those that control LR formation. Hence, AR formation depends on differentially regulated gene products. Similarly to AR induction in stem cuttings, the capacity to induce hypocotyl AR is genotype-dependent and the plant growth regulator auxin is a key regulator controlling the rooting response. The hormones cytokinins, ethylene, jasmonic acid, and strigolactones in general reduce the root-inducing capacity. The involvement of this many regulators indicates that a tight control and fine-tuning of the initiation and emergence of AR exists. Recently, several genetic factors, specific to hypocotyl adventitious rooting in A. thaliana, have been uncovered. These factors reveal a dedicated signaling network that drives AR formation in the Arabidopsis hypocotyl. Here we provide an overview of the environmental and genetic factors controlling hypocotyl-born AR and we summarize how AR formation and the regulating factors of this organogenesis are distinct from LR

  2. Towards a multidimensional root trait framework: a tree root review.

    PubMed

    Weemstra, Monique; Mommer, Liesje; Visser, Eric J W; van Ruijven, Jasper; Kuyper, Thomas W; Mohren, Godefridus M J; Sterck, Frank J

    2016-09-01

    Contents 1159 I. 1159 II. 1161 III. 1164 IV. 1166 1167 References 1167 SUMMARY: The search for a root economics spectrum (RES) has been sparked by recent interest in trait-based plant ecology. By analogy with the one-dimensional leaf economics spectrum (LES), fine-root traits are hypothesised to match leaf traits which are coordinated along one axis from resource acquisitive to conservative traits. However, our literature review and meta-level analysis reveal no consistent evidence of an RES mirroring an LES. Instead the RES appears to be multidimensional. We discuss three fundamental differences contributing to the discrepancy between these spectra. First, root traits are simultaneously constrained by various environmental drivers not necessarily related to resource uptake. Second, above- and belowground traits cannot be considered analogues, because they function differently and might not be related to resource uptake in a similar manner. Third, mycorrhizal interactions may offset selection for an RES. Understanding and explaining the belowground mechanisms and trade-offs that drive variation in root traits, resource acquisition and plant performance across species, thus requires a fundamentally different approach than applied aboveground. We therefore call for studies that can functionally incorporate the root traits involved in resource uptake, the complex soil environment and the various soil resource uptake mechanisms - particularly the mycorrhizal pathway - in a multidimensional root trait framework.

  3. IAA transport in corn roots includes the root cap

    SciTech Connect

    Hasenstein, K.H. )

    1989-04-01

    In earlier reports we concluded that auxin is the growth regulator that controls gravicurvature in roots and that the redistribution of auxin occurs within the root cap. Since other reports did not detect auxin in the root cap, we attempted to confirm the IAA does move through the cap. Agar blocks containing {sup 3}H-IAA were applied to the cut surface of 5 mm long apical segments of primary roots of corn (mo17xB73). After 30 to 120 min radioactivity (RA) of the cap and root tissue was determined. While segments suspended in water-saturated air accumulated very little RA in the cap, application of 0.5 {mu}1 of dist. water to the cap (=controls) increased RA of the cap dramatically. Application to the cap of 0.5 {mu}1 of sorbitol or the Ca{sup 2+} chelator EGTA reduced cap RA to 46% and 70% respectively compared to water, without affecting uptake. Control root segments gravireacted faster than non-treated or osmoticum or EGTA treated segments. The data indicate that both the degree of hydration and calcium control the amount of auxin moving through the cap.

  4. Ultrasonic cleaning of root canals

    NASA Astrophysics Data System (ADS)

    Verhaagen, Bram; Boutsioukis, Christos; Jiang, Lei-Meng; Macedo, Ricardo; van der Sluis, Luc; Versluis, Michel

    2011-11-01

    A crucial step during a dental root canal treatment is irrigation, where an antimicrobial fluid is injected into the root canal system to eradicate all bacteria. Agitation of the fluid using an ultrasonically vibrating miniature file has shown significant improvement in cleaning efficacy over conventional syringe irrigation. However, the physical mechanisms underlying the cleaning process, being acoustic streaming, cavitation or chemical activity, and combinations thereof, are not fully understood. High-speed imaging allows us to visualize the flow pattern and cavitation in a root canal model at microscopic scales, at timescales relevant to the cleaning processes (microseconds). MicroPIV measurements of the induced acoustic streaming are coupled to the oscillation characteristics of the file as simulated numerically and measured with a laser vibrometer. The results give new insight into the role of acoustic streaming and the importance of the confinement for the cleaning of root canals.

  5. Swarming Behavior in Plant Roots

    PubMed Central

    Ciszak, Marzena; Comparini, Diego; Mazzolai, Barbara; Baluska, Frantisek; Arecchi, F. Tito; Vicsek, Tamás; Mancuso, Stefano

    2012-01-01

    Interactions between individuals that are guided by simple rules can generate swarming behavior. Swarming behavior has been observed in many groups of organisms, including humans, and recent research has revealed that plants also demonstrate social behavior based on mutual interaction with other individuals. However, this behavior has not previously been analyzed in the context of swarming. Here, we show that roots can be influenced by their neighbors to induce a tendency to align the directions of their growth. In the apparently noisy patterns formed by growing roots, episodic alignments are observed as the roots grow close to each other. These events are incompatible with the statistics of purely random growth. We present experimental results and a theoretical model that describes the growth of maize roots in terms of swarming. PMID:22272246

  6. Root Patterns in Heterogeneous Soils

    NASA Astrophysics Data System (ADS)

    Dara, A.; Moradi, A. B.; Carminati, A.; Oswald, S. E.

    2010-12-01

    Heterogeneous water availability is a typical characteristic of soils in which plant roots grow. Despite the intrinsic heterogeneity of soil-plant water relations, we know little about the ways how plants respond to local environmental quality. Furthermore, increasing use of soil amendments as partial water reservoirs in agriculture calls for a better understanding of plant response to soil heterogeneity. Neutron radiography is a non-invasive imaging that is highly sensitive to water and root distribution and that has high capability for monitoring spatial and temporal soil-plant water relations in heterogeneous systems. Maize plants were grown in 25 x 30 x 1 cm aluminum slabs filled with sandy soil. On the right side of the compartments a commercial water absorbent (Geohumus) was mixed with the soil. Geohumus was distributed with two patterns: mixed homogeneously with the soil, and arranged as 1-cm diameter aggregates (Fig. 1). Two irrigation treatments were applied: sufficient water irrigation and moderate water stress. Neutron radiography started 10 days after planting and has been performed twice a day for one week. At the end of the experiment, the containers were opened, the root were removed and dry root weight in different soil segments were measured. Neutron radiography showed root growth tendency towards Geohumus treated parts and preferential water uptake from Geohumus aggregates. Number and length of fine lateral roots were lower in treated areas compared to the non-treated zone and to control soil. Although corn plants showed an overall high proliferation towards the soil water sources, they decreased production of branches and fine root when water was more available near the main root parts. However there was 50% higher C allocation in roots grown in Geohumus compartments, as derived by the relative dry weight of root. The preferential C allocation in treated regions was higher when plants grew under water stress. We conclude that in addition to the

  7. Roots: Its Impact and Implications

    PubMed Central

    Jefferson, Roland S.

    1979-01-01

    What is contained in Roots, the 587-page narrative that captured an entire world population? The answer is not simple, nor is it overly complex, but rather an admixture of significant psychological, sociological, and timing factors that served to ignite the fuse of human fascination for the unknown, the hidden truths, the obscure, and the forbidden. This paper analyzes the impact and implications of Roots on many facets of American society. PMID:480399

  8. Disappeared roots: a case report.

    PubMed

    Arathi, R; Kundabala, M; Karen, B

    2008-03-01

    Tooth resorption is a perplexing problem for all dental practitioners. The etiologic factors are vague, the diagnoses are educated guesses and, often, the chosen treatment does not prevent the rapid disappearance of the calcified dental tissues. This becomes all the more confusing if the tooth in question is a pulpally involved young permanent tooth. Presented in this report is the case of an upper first young permanent molar that underwent complete root resorption following root canal therapy and obturation. PMID:18408271

  9. Root Caries in Older Adults.

    PubMed

    Gregory, Dick; Hyde, Susan

    2015-08-01

    Older adults are retaining an increasing number of natural teeth, and nearly half of all individuals aged 75 and older have experienced root caries. Root caries is a major cause of tooth loss in older adults, and tooth loss is the most significant negative impact on oral health-related quality of life for the elderly. The need for improved preventive efforts and treatment strategies for this population is acute.

  10. Root Caries in Older Adults.

    PubMed

    Gregory, Dick; Hyde, Susan

    2015-08-01

    Older adults are retaining an increasing number of natural teeth, and nearly half of all individuals aged 75 and older have experienced root caries. Root caries is a major cause of tooth loss in older adults, and tooth loss is the most significant negative impact on oral health-related quality of life for the elderly. The need for improved preventive efforts and treatment strategies for this population is acute. PMID:26357814

  11. Root nodulation of Sesbania rostrata.

    PubMed Central

    Ndoye, I; de Billy, F; Vasse, J; Dreyfus, B; Truchet, G

    1994-01-01

    The tropical legume Sesbania rostrata can be nodulated by Azorhizobium caulinodans on both its stem and its root system. Here we investigate in detail the process of root nodulation and show that nodules develop exclusively at the base of secondary roots. Intercellular infection leads to the formation of infection pockets, which then give rise to infection threads. Concomitantly with infection, cortical cells of the secondary roots dedifferentiate, forming a meristem which has an "open-basket" configuration and which surrounds the initial infection site. Bacteria are released from the tips of infection threads into plant cells via "infection droplets," each containing several bacteria. Initially, nodule differentiation is comparable to that of indeterminate nodules, with the youngest meristematic cells being located at the periphery and the nitrogen-fixing cells being located at the nodule center. Because of the peculiar form of the meristem, Sesbania root nodules develop uniformly around a central axis. Nitrogen fixation is detected as early as 3 days following inoculation, while the nodule meristem is still active. Two weeks after inoculation, meristematic activity ceases, and nodules then show the typical histology of determinate nodules. Thus, root nodule organogenesis in S. rostrata appears to be intermediate between indeterminate and determinate types. Images PMID:8106317

  12. Plant root-microbe communication in shaping root microbiomes.

    PubMed

    Lareen, Andrew; Burton, Frances; Schäfer, Patrick

    2016-04-01

    A growing body of research is highlighting the impacts root-associated microbial communities can have on plant health and development. These impacts can include changes in yield quantity and quality, timing of key developmental stages and tolerance of biotic and abiotic stresses. With such a range of effects it is clear that understanding the factors that contribute to a plant-beneficial root microbiome may prove advantageous. Increasing demands for food by a growing human population increases the importance and urgency of understanding how microbiomes may be exploited to increase crop yields and reduce losses caused by disease. In addition, climate change effects may require novel approaches to overcoming abiotic stresses such as drought and salinity as well as new emerging diseases. This review discusses current knowledge on the formation and maintenance of root-associated microbial communities and plant-microbe interactions with a particular emphasis on the effect of microbe-microbe interactions on the shape of microbial communities at the root surface. Further, we discuss the potential for root microbiome modification to benefit agriculture and food production.

  13. Plant root-microbe communication in shaping root microbiomes.

    PubMed

    Lareen, Andrew; Burton, Frances; Schäfer, Patrick

    2016-04-01

    A growing body of research is highlighting the impacts root-associated microbial communities can have on plant health and development. These impacts can include changes in yield quantity and quality, timing of key developmental stages and tolerance of biotic and abiotic stresses. With such a range of effects it is clear that understanding the factors that contribute to a plant-beneficial root microbiome may prove advantageous. Increasing demands for food by a growing human population increases the importance and urgency of understanding how microbiomes may be exploited to increase crop yields and reduce losses caused by disease. In addition, climate change effects may require novel approaches to overcoming abiotic stresses such as drought and salinity as well as new emerging diseases. This review discusses current knowledge on the formation and maintenance of root-associated microbial communities and plant-microbe interactions with a particular emphasis on the effect of microbe-microbe interactions on the shape of microbial communities at the root surface. Further, we discuss the potential for root microbiome modification to benefit agriculture and food production. PMID:26729479

  14. Root anatomical phenes predict root penetration ability and biomechanical properties in maize (Zea Mays)

    PubMed Central

    Chimungu, Joseph G.; Loades, Kenneth W.; Lynch, Jonathan P.

    2015-01-01

    The ability of roots to penetrate hard soil is important for crop productivity but specific root phenes contributing to this ability are poorly understood. Root penetrability and biomechanical properties are likely to vary in the root system dependent on anatomical structure. No information is available to date on the influence of root anatomical phenes on root penetrability and biomechanics. Root penetration ability was evaluated using a wax layer system. Root tensile and bending strength were evaluated in plant roots grown in the greenhouse and in the field. Root anatomical phenes were found to be better predictors of root penetrability than root diameter per se and associated with smaller distal cortical region cell size. Smaller outer cortical region cells play an important role in stabilizing the root against ovalization and reducing the risk of local buckling and collapse during penetration, thereby increasing root penetration of hard layers. The use of stele diameter was found to be a better predictor of root tensile strength than root diameter. Cortical thickness, cortical cell count, cortical cell wall area and distal cortical cell size were stronger predictors of root bend strength than root diameter. Our results indicate that root anatomical phenes are important predictors for root penetrability of high-strength layers and root biomechanical properties. PMID:25903914

  15. How Can Science Education Foster Students' Rooting?

    ERIC Educational Resources Information Center

    Østergaard, Edvin

    2015-01-01

    The question of how to foster rooting in science education points towards a double challenge; efforts to "prevent" (further) uprooting and efforts to "promote" rooting/re-rooting. Wolff-Michael Roth's paper discusses the uprooting/rooting pair of concepts, students' feeling of alienation and loss of fundamental sense of the…

  16. MES Buffer Affects Arabidopsis Root Apex Zonation and Root Growth by Suppressing Superoxide Generation in Root Apex.

    PubMed

    Kagenishi, Tomoko; Yokawa, Ken; Baluška, František

    2016-01-01

    In plants, growth of roots and root hairs is regulated by the fine cellular control of pH and reactive oxygen species (ROS). MES, 2-(N-morpholino)ethanesulfonic acid as one of the Good's buffers has broadly been used for buffering medium, and it is thought to suit for plant growth with the concentration at 0.1% (w/v) because the buffer capacity of MES ranging pH 5.5-7.0 (for Arabidopsis, pH 5.8). However, many reports have shown that, in nature, roots require different pH values on the surface of specific root apex zones, namely meristem, transition zone, and elongation zone. Despite the fact that roots always grow on a media containing buffer molecule, little is known about impact of MES on root growth. Here, we have checked the effects of different concentrations of MES buffer using growing roots of Arabidopsis thaliana. Our results show that 1% of MES significantly inhibited root growth, the number of root hairs and length of meristem, whereas 0.1% promoted root growth and root apex area (region spanning from the root tip up to the transition zone). Furthermore, superoxide generation in root apex disappeared at 1% of MES. These results suggest that MES disturbs normal root morphogenesis by changing the ROS homeostasis in root apex. PMID:26925066

  17. MES Buffer Affects Arabidopsis Root Apex Zonation and Root Growth by Suppressing Superoxide Generation in Root Apex

    PubMed Central

    Kagenishi, Tomoko; Yokawa, Ken; Baluška, František

    2016-01-01

    In plants, growth of roots and root hairs is regulated by the fine cellular control of pH and reactive oxygen species (ROS). MES, 2-(N-morpholino)ethanesulfonic acid as one of the Good’s buffers has broadly been used for buffering medium, and it is thought to suit for plant growth with the concentration at 0.1% (w/v) because the buffer capacity of MES ranging pH 5.5–7.0 (for Arabidopsis, pH 5.8). However, many reports have shown that, in nature, roots require different pH values on the surface of specific root apex zones, namely meristem, transition zone, and elongation zone. Despite the fact that roots always grow on a media containing buffer molecule, little is known about impact of MES on root growth. Here, we have checked the effects of different concentrations of MES buffer using growing roots of Arabidopsis thaliana. Our results show that 1% of MES significantly inhibited root growth, the number of root hairs and length of meristem, whereas 0.1% promoted root growth and root apex area (region spanning from the root tip up to the transition zone). Furthermore, superoxide generation in root apex disappeared at 1% of MES. These results suggest that MES disturbs normal root morphogenesis by changing the ROS homeostasis in root apex. PMID:26925066

  18. [Allelopathy of garlic root exudates].

    PubMed

    Zhou, Yan-Li; Wang, Yan; Li, Jin-Ying; Xue, Yan-Jie

    2011-05-01

    By the method of water culture, the root exudates of Cangshan garlic and Caijiapo garlic were collected to study their allelopathic effects on the seed germination and seedling growth of lettuce, and on the development of pathogens Fusarium oxysporum f. sp. cucumerinum and F. oxysporium f. sp. niveum. The root exudates of the two garlic cultivars promoted the lettuce seed germination and seedling growth at low concentrations (0.1 and 0.2 g x mL(-1)), but showed inhibitory effects at high concentrations (0.4 and 0.6 g x mL(-1)), with the inhibitory effects being stronger for the root exudates of Caijiapo garlic. The two garlic cultivars' root exudates also had inhibitory effects on the mycelia growth and spore germination of the pathogens, and the effects increased with increasing concentration of the exudates, being stronger for Caijiapo garlic than for Cangshan garlic. F. oxysporum f. sp. cucumerinum was more sensitive to the inhibitory effects of the root exudates of the two garlic cultivars, as compared to F. oxysporium f. sp. niveum.

  19. Magnetophoretic Induction of Root Curvature

    NASA Technical Reports Server (NTRS)

    Hasenstein, Karl H.

    1997-01-01

    The last year of the grant period concerned the consolidation of previous experiments to ascertain that the theoretical premise apply not just to root but also to shoots. In addition, we verified that high gradient magnetic fields do not interfere with regular cellular activities. Previous results have established that: (1) intracellular magnetophoresis is possible; and (2) HGMF lead to root curvature. In order to investigate whether HGMF affect the assembly and/or organization of structural proteins, we examined the arrangement of microtubules in roots exposed to HGMF. The cytoskeletal investigations were performed with fomaldehyde-fixed, nonembedded tissue segments that were cut with a vibratome. Microtubules (MTs) were stained with rat anti-yeast tubulin (YOL 1/34) and DTAF-labeled antibody against rat IgG. Microfilaments (MFs) were visualized by incubation in rhodamine-labeled phalloidin. The distribution and arrangement of both components of the cytoskeleton were examined with a confocal microscope. Measurements of growth rates and graviresponse were done using a video-digitizer. Since HGMF repel diamagnetic substances including starch-filled amyloplasts and most The second aspect of the work includes studies of the effect of cytoskeletal inhibitors on MTs and MFs. The analysis of the effect of micotubular inhibitors on the auxin transport in roots showed that there is very little effect of MT-depolymerizing or stabilizing drugs on auxin transport. This is in line with observations that application of such drugs is not immediately affecting the graviresponsiveness of roots.

  20. Association of azospirillum with grass roots.

    PubMed

    Umali-Garcia, M; Hubbell, D H; Gaskins, M H; Dazzo, F B

    1980-01-01

    The association between grass roots and Azospirillum brasilense Sp 7 was investigated by the Fahraeus slide technique, using nitrogen-free medium. Young inoculated roots of pearl millet and guinea grass produced more mucilaginous sheath (mucigel), root hairs, and lateral roots than did uninoculated sterile controls. The bacteria were found within the mucigel that accumulated on the root cap and along the root axes. Adherent bacteria were associated with granular material on root hairs and fibrillar material on undifferentiated epidermal cells. Significantly fewer numbers of azospirilla attached to millet root hairs when the roots were grown in culture medium supplemented with 5 mM potassium nitrate. Under these growth conditions, bacterial attachment to undifferentiated epidermal cells was unaffected. Aseptically collected root exudate from pearl millet contained substances which bound to azospirilla and promoted their adsorption to the root hairs. This activity was associated with nondialyzable and proteasesensitive substances in root exudate. Millet root hairs adsorbed azospirilla in significantly higher numbers than cells of Rhizobium, Pseudomonas, Azotobacter, Klebsiella, or Escherichia. Pectolytic activities, including pectin transeliminase and endopolygalacturonase, were detected in pure cultures of A. brasilense when this species was grown in a medium containing pectin. These studies describe colonization of grass root surfaces by A. brasilense and provide a possible explanation for the limited colonization of intercellular spaces of the outer root cortex.

  1. ROOT I/O Improvements

    NASA Astrophysics Data System (ADS)

    Canal, Ph

    2012-12-01

    In the past year, the development of ROOT I/O has focused on improving the existing code and increasing the collaboration with the experiments’ experts. Regular I/O workshops have been held to share and build upon the various experiences and points of view. The resulting improvements in ROOT I/O span many dimensions including reduction and more control over the memory usage, reduction in CPU usage as well as optimization of the file size and the hardware I/O utilization. Many of these enhancements came as a result of an increased collaboration with the experiments’ development teams and their direct contributions both in code and quarterly ROOT I/O workshops.

  2. Descendant root volume varies as a function of root type: estimation of root biomass lost during uprooting in Pinus pinaster

    PubMed Central

    Danjon, Frédéric; Caplan, Joshua S.; Fortin, Mathieu; Meredieu, Céline

    2013-01-01

    Root systems of woody plants generally display a strong relationship between the cross-sectional area or cross-sectional diameter (CSD) of a root and the dry weight of biomass (DWd) or root volume (Vd) that has grown (i.e., is descendent) from a point. Specification of this relationship allows one to quantify root architectural patterns and estimate the amount of material lost when root systems are extracted from the soil. However, specifications of this relationship generally do not account for the fact that root systems are comprised of multiple types of roots. We assessed whether the relationship between CSD and Vd varies as a function of root type. Additionally, we sought to identify a more accurate and time-efficient method for estimating missing root volume than is currently available. We used a database that described the 3D root architecture of Pinus pinaster root systems (5, 12, or 19 years) from a stand in southwest France. We determined the relationship between CSD and Vd for 10,000 root segments from intact root branches. Models were specified that did and did not account for root type. The relationships were then applied to the diameters of 11,000 broken root ends to estimate the volume of missing roots. CSD was nearly linearly related to the square root of Vd, but the slope of the curve varied greatly as a function of root type. Sinkers and deep roots tapered rapidly, as they were limited by available soil depth. Distal shallow roots tapered gradually, as they were less limited spatially. We estimated that younger trees lost an average of 17% of root volume when excavated, while older trees lost 4%. Missing volumes were smallest in the central parts of root systems and largest in distal shallow roots. The slopes of the curves for each root type are synthetic parameters that account for differentiation due to genetics, soil properties, or mechanical stimuli. Accounting for this differentiation is critical to estimating root loss accurately. PMID

  3. New theories of root growth modelling

    NASA Astrophysics Data System (ADS)

    Landl, Magdalena; Schnepf, Andrea; Vanderborght, Jan; Huber, Katrin; Javaux, Mathieu; Bengough, A. Glyn; Vereecken, Harry

    2016-04-01

    In dynamic root architecture models, root growth is represented by moving root tips whose line trajectory results in the creation of new root segments. Typically, the direction of root growth is calculated as the vector sum of various direction-affecting components. However, in our simulations this did not reproduce experimental observations of root growth in structured soil. We therefore developed a new approach to predict the root growth direction. In this approach we distinguish between, firstly, driving forces for root growth, i.e. the force exerted by the root which points in the direction of the previous root segment and gravitropism, and, secondly, the soil mechanical resistance to root growth or penetration resistance. The latter can be anisotropic, i.e. depending on the direction of growth, which leads to a difference between the direction of the driving force and the direction of the root tip movement. Anisotropy of penetration resistance can be caused either by microscale differences in soil structure or by macroscale features, including macropores. Anisotropy at the microscale is neglected in our model. To allow for this, we include a normally distributed random deflection angle α to the force which points in the direction of the previous root segment with zero mean and a standard deviation σ. The standard deviation σ is scaled, so that the deflection from the original root tip location does not depend on the spatial resolution of the root system model. Similarly to the water flow equation, the direction of the root tip movement corresponds to the water flux vector while the driving forces are related to the water potential gradient. The analogue of the hydraulic conductivity tensor is the root penetrability tensor. It is determined by the inverse of soil penetration resistance and describes the ease with which a root can penetrate the soil. By adapting the three dimensional soil and root water uptake model R-SWMS (Javaux et al., 2008) in this way

  4. Root branching: mechanisms, robustness, and plasticity.

    PubMed

    Dastidar, Mouli Ghosh; Jouannet, Virginie; Maizel, Alexis

    2012-01-01

    Plants are sessile organisms that must efficiently exploit their habitat for water and nutrients. The degree of root branching impacts the efficiency of water uptake, acquisition of nutrients, and anchorage. The root system of plants is a dynamic structure whose architecture is determined by modulation of primary root growth and root branching. This plasticity relies on the continuous integration of environmental inputs and endogenous developmental programs controlling root branching. This review focuses on the cellular and molecular mechanisms involved in the regulation of lateral root distribution, initiation, and organogenesis with the main focus on the root system of Arabidopsis thaliana. We also examine the mechanisms linking environmental changes to the developmental pathways controlling root branching. Recent progress that emphasizes the parallels to the formation of root branches in other species is discussed. PMID:23801487

  5. Rhizobial infection in Adesmia bicolor (Fabaceae) roots.

    PubMed

    Bianco, Luciana

    2014-09-01

    The native legume Adesmia bicolor shows nitrogen fixation efficiency via symbiosis with soil rhizobia. The infection mechanism by means of which rhizobia infect their roots has not been fully elucidated to date. Therefore, the purpose of the present study was to identify the infection mechanism in Adesmia bicolor roots. To this end, inoculated roots were processed following conventional methods as part of our root anatomy study, and the shape and distribution of root nodules were analyzed as well. Neither root hairs nor infection threads were observed in the root system, whereas infection sites-later forming nodules-were observed in the longitudinal sections. Nodules were found to form between the main root and the lateral roots. It can be concluded that in Adesmia bicolor, a bacterial crack entry infection mechanism prevails and that such mechanism could be an adaptive strategy of this species which is typical of arid environments.

  6. Root growth, secondary root formation and root gravitropism in carotenoid-deficient seedlings of Zea mays L

    NASA Technical Reports Server (NTRS)

    Ng, Y. K.; Moore, R.

    1985-01-01

    The effect of ABA on root growth, secondary-root formation and root gravitropism in seedlings of Zea mays was investigated by using Fluridone-treated seedlings and a viviparous mutant, both of which lack carotenoids and ABA. Primary roots of seedlings grown in the presence of Fluridone grew significantly slower than those of control (i.e. untreated) roots. Elongation of Fluridone-treated roots was inhibited significantly by the exogenous application of 1 mM ABA. Exogenous application of 1 micromole and 1 nmole ABA had either no effect or only a slight stimulatory effect on root elongation, depending on the method of application. The absence of ABA in Fluridone-treated plants was not an important factor in secondary-root formation in seedlings less than 9-10 d old. However, ABA may suppress secondary-root formation in older seedlings, since 11-d-old control seedlings had significantly fewer secondary roots than Fluridone-treated seedlings. Roots of Fluridone-treated and control seedlings were graviresponsive. Similar data were obtained for vp-9 mutants of Z. mays, which are phenotypically identical to Fluridone-treated seedlings. These results indicate that ABA is necessary for neither secondary-root formation nor for positive gravitropism by primary roots.

  7. Four cuspal maxillary second premolar with single root and three root canals: Case report.

    PubMed

    Bansal, Parul; Nikhil, Vineeta; Goyal, Ayush; Singh, Ritu

    2016-01-01

    Traditional configuration of maxillary second premolars has been described to have two cusps, one root and one or two root canals. The endodontic literature reports considerable anatomic aberrations in the root canal morphology of maxillary second premolar but the literature available on the variation in cuspal anatomy and its relationship to the root canal anatomy is sparse. The purpose of this clinical report was to describe the root and root canal configuration of a maxillary second premolar with four cusps. PMID:27563190

  8. Deciduous Mandibular Second Molar with Supernumerary Roots and Root Canals Associated with Missing Mandibular Permanent Premolar

    PubMed Central

    Shafi, Shabina; Gambhir, Natasha; Rehani, Usha

    2011-01-01

    Morphological variations like additional roots and root canals in human deciduous dentition are rare. Knowledge of the morphology, variation of root and root canals of deciduous teeth are useful for successful endodontic treatment and exodontia. Presented here is a case report of the supernumerary roots and additional root canals of deciduous mandibular second molar (85) with congenitally bilateral missing of mandibular permanent second premolar (35 and 45) tooth bud.

  9. Four cuspal maxillary second premolar with single root and three root canals: Case report

    PubMed Central

    Bansal, Parul; Nikhil, Vineeta; Goyal, Ayush; Singh, Ritu

    2016-01-01

    Traditional configuration of maxillary second premolars has been described to have two cusps, one root and one or two root canals. The endodontic literature reports considerable anatomic aberrations in the root canal morphology of maxillary second premolar but the literature available on the variation in cuspal anatomy and its relationship to the root canal anatomy is sparse. The purpose of this clinical report was to describe the root and root canal configuration of a maxillary second premolar with four cusps. PMID:27563190

  10. [Effects nutrients on the seedlings root hair development and root growth of Poncirus trifoliata under hydroponics condition].

    PubMed

    Cao, Xiu; Xia, Ren-Xue; Zhang, De-Jian; Shu, Bo

    2013-06-01

    Ahydroponics experiment was conducted to study the effects of nutrients (N, P, K, Ca, Mg, Fe, and Mn) deficiency on the length of primary root, the number of lateral roots, and the root hair density, length, and diameter on the primary root and lateral roots of Poncirus trifoliata seedlings. Under the deficiency of each test nutrient, root hair could generate, but was mainly concentrated on the root base and fewer on the root tip. The root hair density on lateral roots was significantly larger than that on primary root, but the root hair length was in adverse. The deficiency of each test nutrient had greater effects on the growth and development of root hairs, with the root hair density on primary root varied from 55.0 to 174.3 mm(-2). As compared with the control, Ca deficiency induced the significant increase of root hair density and length on primary root, P deficiency promoted the root hair density and length on the base and middle part of primary root and on the lateral roots significantly, Fe deficiency increased the root hair density but decreased the root hair length on the tip of primary root significantly, K deficiency significantly decreased the root hair density, length, and diameter on primary root and lateral roots, whereas Mg deficiency increased the root hair length of primary root significantly. In all treatments of nutrient deficiency, the primary root had the similar growth rate, but, with the exceptions of N and Mg deficiency, the lateral roots exhibited shedding and regeneration.

  11. Excising the Root from STEM

    ERIC Educational Resources Information Center

    Lock, Roger

    2009-01-01

    There are a number of well-intentioned STEM initiatives, some designed to improve the recruitment and retention of science teachers. Sometimes it appears that the initiators are remote from direct contact with the "grass roots" issues that feed the "stem" on which the blossoms of young enthusiastic recruits to the science teaching profession are…

  12. Disease notes - Bacterial root rot

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Bacterial root rot initiated by lactic acid bacteria, particularly Leuconostoc, occurs every year in Idaho sugarbeet fields. Hot fall weather seems to make the problem worse. Although Leuconostoc initiates the rot, other bacteria and yeast frequently invade the tissue as well. The acetic acid bac...

  13. The Social Impact of "Roots"

    ERIC Educational Resources Information Center

    Hur, Kenneth K.; Robinson, John P.

    1978-01-01

    A survey revealed that a larger percentage of blacks than of whites had watched the television drama "Roots," considered it accurate, and discussed it with friends. The program's influence on the racial attitude of whites was found to be less than many media observers had believed. (GW)

  14. Investigation of VEGGIE Root Mat

    NASA Technical Reports Server (NTRS)

    Subbiah, Arun M.

    2013-01-01

    VEGGIE is a plant growth facility that utilizes the phenomenon of capillary action as its primary watering system. A cloth made of Meta Aramid fiber, known as Nomex is used to wick water up from a reservoir to the bottom of the plants roots. This root mat system is intended to be low maintenance with no moving parts and requires minimal crew interface time. Unfortunately, the water wicking rates are inconsistent throughout the plant life cycle, thus causing plants to die. Over-wicking of water occurs toward the beginning of the cycle, while under-wicking occurs toward the middle. This inconsistency of wicking has become a major issue, drastically inhibiting plant growth. The primary objective is to determine the root cause of the inconsistent wicking through experimental testing. Suspect causes for the capillary water column to break include: a vacuum effect due to a negative pressure gradient in the water reservoir, contamination of material due to minerals in water and back wash from plant fertilizer, induced air bubbles while using syringe refill method, and material limitations of Nomex's ability to absorb and retain water. Experimental testing will be conducted to systematically determine the cause of under and over-wicking. Pressure gages will be used to determine pressure drop during the course of the plant life cycle and during the water refill process. A debubbler device will be connected to a root mat in order to equalize pressure inside the reservoir. Moisture and evaporation tests will simultaneously be implemented to observe moisture content and wicking rates over the course of a plant cycle. Water retention tests will be performed using strips of Nomex to determine materials wicking rates, porosity, and absorptivity. Through these experimental tests, we will have a better understanding of material properties of Nomex, as well as determine the root cause of water column breakage. With consistent test results, a forward plan can be achieved to resolve

  15. Characterizing pathways by which gravitropic effectors could move from the root cap to the root of primary roots of Zea mays

    NASA Technical Reports Server (NTRS)

    Moore, R.; McClelen, C. E.

    1989-01-01

    Plasmodesmata linking the root cap and root in primary roots Zea mays are restricted to approx. 400 protodermal cells bordering approx. 110000 microns2 of the calyptrogen of the root cap. This area is less than 10% of the cross-sectional area of the root-tip at the cap junction. Therefore, gravitropic effectors moving from the root cap to the root can move symplastically only through a relatively small area in the centre of the root. Decapped roots are non-responsive to gravity. However, decapped roots whose caps are replaced immediately after decapping are strongly graviresponsive. Thus, gravicurvature occurs only when the root cap contacts the root, and symplastic continuity between the cap and root is not required for gravicurvature. Completely removing mucilage from the root tip renders the root non-responsive to gravity. Taken together, these data suggest that gravitropic effectors move apoplastically through mucilage from the cap to the root.

  16. Root formation in ethylene-insensitive plants.

    PubMed

    Clark, D G; Gubrium, E K; Barrett, J E; Nell, T A; Klee, H J

    1999-09-01

    Experiments with ethylene-insensitive tomato (Lycopersicon esculentum) and petunia (Petunia x hybrida) plants were conducted to determine if normal or adventitious root formation is affected by ethylene insensitivity. Ethylene-insensitive Never ripe (NR) tomato plants produced more below-ground root mass but fewer above-ground adventitious roots than wild-type Pearson plants. Applied auxin (indole-3-butyric acid) increased adventitious root formation on vegetative stem cuttings of wild-type plants but had little or no effect on rooting of NR plants. Reduced adventitious root formation was also observed in ethylene-insensitive transgenic petunia plants. Applied 1-aminocyclopropane-1-carboxylic acid increased adventitious root formation on vegetative stem cuttings from NR and wild-type plants, but NR cuttings produced fewer adventitious roots than wild-type cuttings. These data suggest that the promotive effect of auxin on adventitious rooting is influenced by ethylene responsiveness. Seedling root growth of tomato in response to mechanical impedance was also influenced by ethylene sensitivity. Ninety-six percent of wild-type seedlings germinated and grown on sand for 7 d grew normal roots into the medium, whereas 47% of NR seedlings displayed elongated tap-roots, shortened hypocotyls, and did not penetrate the medium. These data indicate that ethylene has a critical role in various responses of roots to environmental stimuli.

  17. Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions.

    PubMed

    Uga, Yusaku; Sugimoto, Kazuhiko; Ogawa, Satoshi; Rane, Jagadish; Ishitani, Manabu; Hara, Naho; Kitomi, Yuka; Inukai, Yoshiaki; Ono, Kazuko; Kanno, Noriko; Inoue, Haruhiko; Takehisa, Hinako; Motoyama, Ritsuko; Nagamura, Yoshiaki; Wu, Jianzhong; Matsumoto, Takashi; Takai, Toshiyuki; Okuno, Kazutoshi; Yano, Masahiro

    2013-09-01

    The genetic improvement of drought resistance is essential for stable and adequate crop production in drought-prone areas. Here we demonstrate that alteration of root system architecture improves drought avoidance through the cloning and characterization of DEEPER ROOTING 1 (DRO1), a rice quantitative trait locus controlling root growth angle. DRO1 is negatively regulated by auxin and is involved in cell elongation in the root tip that causes asymmetric root growth and downward bending of the root in response to gravity. Higher expression of DRO1 increases the root growth angle, whereby roots grow in a more downward direction. Introducing DRO1 into a shallow-rooting rice cultivar by backcrossing enabled the resulting line to avoid drought by increasing deep rooting, which maintained high yield performance under drought conditions relative to the recipient cultivar. Our experiments suggest that control of root system architecture will contribute to drought avoidance in crops.

  18. Nicotiana Roots Recruit Rare Rhizosphere Taxa as Major Root-Inhabiting Microbes.

    PubMed

    Saleem, Muhammad; Law, Audrey D; Moe, Luke A

    2016-02-01

    Root-associated microbes have a profound impact on plant health, yet little is known about the distribution of root-associated microbes among different root morphologies or between rhizosphere and root environments. We explore these issues here with two commercial varieties of burley tobacco (Nicotiana tabacum) using 16S rRNA gene amplicon sequencing from rhizosphere soil, as well as from primary, secondary, and fine roots. While rhizosphere soils exhibited a fairly rich and even distribution, root samples were dominated by Proteobacteria. A comparison of abundant operational taxonomic units (OTUs) between rhizosphere and root samples indicated that Nicotiana roots select for rare taxa (predominantly Proteobacteria, Verrucomicrobia, Actinobacteria, Bacteroidetes, and Acidobacteria) from their corresponding rhizosphere environments. The majority of root-inhabiting OTUs (~80 %) exhibited habitat generalism across the different root morphological habitats, although habitat specialists were noted. These results suggest a specific process whereby roots select rare taxa from a larger community.

  19. GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems.

    PubMed

    Rellán-Álvarez, Rubén; Lobet, Guillaume; Lindner, Heike; Pradier, Pierre-Luc; Sebastian, Jose; Yee, Muh-Ching; Geng, Yu; Trontin, Charlotte; LaRue, Therese; Schrager-Lavelle, Amanda; Haney, Cara H; Nieu, Rita; Maloof, Julin; Vogel, John P; Dinneny, José R

    2015-08-19

    Root systems develop different root types that individually sense cues from their local environment and integrate this information with systemic signals. This complex multi-dimensional amalgam of inputs enables continuous adjustment of root growth rates, direction, and metabolic activity that define a dynamic physical network. Current methods for analyzing root biology balance physiological relevance with imaging capability. To bridge this divide, we developed an integrated-imaging system called Growth and Luminescence Observatory for Roots (GLO-Roots) that uses luminescence-based reporters to enable studies of root architecture and gene expression patterns in soil-grown, light-shielded roots. We have developed image analysis algorithms that allow the spatial integration of soil properties, gene expression, and root system architecture traits. We propose GLO-Roots as a system that has great utility in presenting environmental stimuli to roots in ways that evoke natural adaptive responses and in providing tools for studying the multi-dimensional nature of such processes.

  20. The role of strigolactones in root development

    PubMed Central

    Sun, Huwei; Tao, Jinyuan; Gu, Pengyuan; Xu, Guohua; Zhang, Yali

    2016-01-01

    Strigolactones (SLs) and their derivatives were recently defined as novel phytohormones that orchestrate shoot and root growth. Levels of SLs, which are produced mainly by plant roots, increase under low nitrogen and phosphate levels to regulate plant responses. Here, we summarize recent work on SL biology by describing their role in the regulation of root development and hormonal crosstalk during root deve-lopment. SLs promote the elongation of seminal/primary roots and adventitious roots (ARs) and they repress lateral root formation. In addition, auxin signaling acts downstream of SLs. AR formation is positively or negatively regulated by SLs depending largely on the plant species and experimental conditions. The relationship between SLs and auxin during AR formation appears to be complex. Most notably, this hormonal response is a key adaption that radically alters rice root architecture in response to nitrogen- and phosphate-deficient conditions. PMID:26515106

  1. Brassinosteroids Regulate Root Growth, Development, and Symbiosis.

    PubMed

    Wei, Zhuoyun; Li, Jia

    2016-01-01

    Brassinosteroids (BRs) are natural plant hormones critical for growth and development. BR deficient or signaling mutants show significantly shortened root phenotypes. However, for a long time, it was thought that these phenotypes were solely caused by reduced cell elongation in the mutant roots. Functions of BRs in regulating root development have been largely neglected. Nonetheless, recent detailed analyses, revealed that BRs are not only involved in root cell elongation but are also involved in many aspects of root development, such as maintenance of meristem size, root hair formation, lateral root initiation, gravitropic response, mycorrhiza formation, and nodulation in legume species. In this review, current findings on the functions of BRs in mediating root growth, development, and symbiosis are discussed.

  2. Rhizosphere biophysics and root water uptake

    NASA Astrophysics Data System (ADS)

    Carminati, Andrea; Zarebanadkouki, Mohsen; Ahmed, Mutez A.; Passioura, John

    2016-04-01

    The flow of water into the roots and the (putative) presence of a large resistance at the root-soil interface have attracted the attention of plant and soil scientists for decades. Such resistance has been attributed to a partial contact between roots and soil, large gradients in soil matric potential around the roots, or accumulation of solutes at the root surface creating a negative osmotic potential. Our hypothesis is that roots are capable of altering the biophysical properties of the soil around the roots, the rhizosphere, facilitating root water uptake in dry soils. In particular, we expect that root hairs and mucilage optimally connect the roots to the soil maintaining the hydraulic continuity across the rhizosphere. Using a pressure chamber apparatus we measured the relation between transpiration rate and the water potential difference between soil and leaf xylem during drying cycles in barley mutants with and without root hairs. The samples were grown in well structured soils. At low soil moistures and high transpiration rates, large drops in water potential developed around the roots. These drops in water potential recovered very slowly, even after transpiration was severely decreased. The drops in water potential were much bigger in barley mutants without root hairs. These mutants failed to sustain high transpiration rates in dry conditions. To explain the nature of such drops in water potential across the rhizosphere we performed high resolution neutron tomography of the rhizosphere of the barleys with and without root hairs growing in the same soil described above. The tomograms suggested that the hydraulic contact between the soil structures was the highest resistance for the water flow in dry conditions. The tomograms also indicate that root hairs and mucilage improved the hydraulic contact between roots and soil structures. At high transpiration rates and low water contents, roots extracted water from the rhizosphere, while the bulk soil, due its

  3. Root proliferation in decaying roots and old root channels: A nutrient conservation mechanism in oligotrophic mangrove forests?

    USGS Publications Warehouse

    McKee, K.L.

    2001-01-01

    1. In oligotrophic habitats, proliferation of roots in nutrient-rich microsites may contribute to overall nutrient conservation by plants. Peat-based soils on mangrove islands in Belize are characterized by the presence of decaying roots and numerous old root channels (0.1-3.5 cm diameter) that become filled with living and highly branched roots of Rhizophora mangle and Avicennia germinans. The objectives of this study were to quantify the proliferation of roots in these microsites and to determine what causes this response. 2. Channels formed by the refractory remains of mangrove roots accounted for only 1-2% of total soil volume, but the proportion of roots found within channels varied from 9 to 24% of total live mass. Successive generations of roots growing inside increasingly smaller root channels were also found. 3. When artificial channels constructed of PVC pipe were buried in the peat for 2 years, those filled with nutrient-rich organic matter had six times more roots than empty or sand-filled channels, indicating a response to greater nutrient availability rather than to greater space or less impedance to root growth. 4. Root proliferation inside decaying roots may improve recovery of nutrients released from decomposing tissues before they can be leached or immobilized in this intertidal environment. Greatest root proliferation in channels occurred in interior forest zones characterized by greater soil waterlogging, which suggests that this may be a strategy for nutrient capture that minimizes oxygen losses from the whole root system. 5. Improved efficiency of nutrient acquisition at the individual plant level has implications for nutrient economy at the ecosystem level and may explain, in part, how mangroves persist and grow in nutrient-poor environments.

  4. How Roots Perceive and Respond to Gravity.

    ERIC Educational Resources Information Center

    Moore, Randy

    1984-01-01

    Discusses graviperception and gravitropism by plant roots. Indicates that graviperception occurs via sedimentation of amyloplasts in columella cells of the root cap and that the minimal graviresponsiveness of lateral roots may be due to the intensity of their caps to establish a concentration gradient of inhibitor(s) sufficient to affect…

  5. Root Cause Analysis: Methods and Mindsets.

    ERIC Educational Resources Information Center

    Kluch, Jacob H.

    This instructional unit is intended for use in training operations personnel and others involved in scram analysis at nuclear power plants in the techniques of root cause analysis. Four lessons are included. The first lesson provides an overview of the goals and benefits of the root cause analysis method. Root cause analysis techniques are covered…

  6. Root Cause Analysis, Part 2: STERILE COMPOUNDING.

    PubMed

    Cabaleiro, Joe; Jackson, Kathleen

    2016-01-01

    When an adverse event or near miss occurs in a pharmacy, eliminating the root cause to prevent recurrence is critically important. Addressing the root cause of the problem reduces the recurrence of putting patients and the pharmacy at risk. This article proposes a method for performing Root Cause Analysis applicable to sterile compounding. PMID:27323421

  7. QCD with rooted staggered fermions

    NASA Astrophysics Data System (ADS)

    Goltermann, M.

    In this talk, I will give an overview of the theoretical status of staggered Lattice QCD with the “fourth-root trick.” In this regularization of QCD, a separate staggered quark field is used for each physical flavor, and the inherent four-fold multiplicity that comes with the use of staggered fermions is removed by taking the fourth root of the staggered determinant for each flavor. At nonzero lattice spacing, the resulting theory is nonlocal and not unitary, but there are now strong arguments that this disease is cured in the continuum limit. In addition, the approach to the continuum limit can be understood in detail in the framework of effective field theories such as staggered chiral perturbation theory.

  8. Springback in Root Gravitropism 1

    PubMed Central

    Leopold, A. Carl; Wettlaufer, Scott H.

    1989-01-01

    Conditions under which a gravistimulus of Merit corn roots (Zea mays L.) is withdrawn result in a subsequent loss of gravitropic curvature, an effect which we refer to as `springback.' This loss of curvature begins within 1 to 10 minutes after removal of the gravistimulus. It occurs regardless of the presence or absence of the root cap. It is insensitive to inhibitors of auxin transport (2,3,5-triiodobenzoic acid, naphthylphthalmaic acid) or to added auxin (2,4-dichlorophenoxyacetic acid). Springback is prevented if a clinostat treatment is interjected to neutralize gravistimulation during germination, which suggests that the change in curvature is a response to a `memory' effect carried over from a prior gravistimulation. PMID:11537456

  9. Fine Root Longevity Still Under Debate

    NASA Astrophysics Data System (ADS)

    Keel, S. G.; Blackburn, M.; Campbell, C.; Högberg, M. N.; Richter, A.; Wild, B.; Högberg, P.

    2008-12-01

    Assuming that fine roots (< 2 mm in diameter) turn over once per year, they represent a third of the global annual net primary productivity. These turnover estimates are based on rhizotron studies, where root longevity is determined by monitoring the appearance/disappearance of roots on a screen, which is inserted into the soil. Much slower fine root turnover rates were found using carbon (C) isotope methods (either 14C dating or continuous 13C-labelling), resulting in root longevities of several years. Stable C isotope tracer experiments, are argued to overestimate fine root longevities, mainly because the smallest roots with the highest turn over, are easily missed during sampling. The goal of the present study was therefore to carry out a C-labelling experiment, and specifically focus on the finest roots, namely root tips. In addition we sampled whole fine roots (<1 mm and 1-3 mm in diameter), as in other studies. We pulse labelled 14-year-old Pinus sylvestris (Pine) trees in the field for only three hours with highly 13C-enriched CO2 (24 atom percent). The mean residence time (MRT) of recently assimilated C in root tips was determined, as a measure for root longevity. Already two days after labelling, recent C had been translocated from the crowns to fine roots indicating rapid belowground C allocation. 13C signals in root tips were stronger than in whole roots, which shows that they are the most active part of the root system. MRT of C calculated using first order exponential decay functions of C in bulk roots were around 20 days in both <1mm and 1-3mm roots and 29 days in root tips. A rapid decline in 13C signals was observed which could be explained by a rapid decrease in the signal of the sucrose pool, which had a MRT of 5 days. However, part of the labelled C had been allocated to a pool with a slower turnover rate (most likely structural compounds such as cellulose) as indicated by persisting 13C signals measured 120 days after labelling. MRT of C in

  10. Phene synergism between root hair length and basal root growth angle for phosphorus acquisition.

    PubMed

    Miguel, Magalhaes Amade; Postma, Johannes Auke; Lynch, Jonathan Paul

    2015-04-01

    Shallow basal root growth angle (BRGA) increases phosphorus acquisition efficiency by enhancing topsoil foraging because in most soils, phosphorus is concentrated in the topsoil. Root hair length and density (RHL/D) increase phosphorus acquisition by expanding the soil volume subject to phosphorus depletion through diffusion. We hypothesized that shallow BRGA and large RHL/D are synergetic for phosphorus acquisition, meaning that their combined effect is greater than the sum of their individual effects. To evaluate this hypothesis, phosphorus acquisition in the field in Mozambique was compared among recombinant inbred lines of common bean (Phaseolus vulgaris) having four distinct root phenotypes: long root hairs and shallow basal roots, long root hairs and deep basal roots, short root hairs and shallow basal roots, and short root hairs and deep basal roots. The results revealed substantial synergism between BRGA and RHL/D. Compared with short-haired, deep-rooted phenotypes, long root hairs increased shoot biomass under phosphorus stress by 89%, while shallow roots increased shoot biomass by 58%. Genotypes with both long root hairs and shallow roots had 298% greater biomass accumulation than short-haired, deep-rooted phenotypes. Therefore, the utility of shallow basal roots and long root hairs for phosphorus acquisition in combination is twice as large as their additive effects. We conclude that the anatomical phene of long, dense root hairs and the architectural phene of shallower basal root growth are synergetic for phosphorus acquisition. Phene synergism may be common in plant biology and can have substantial importance for plant fitness, as shown here.

  11. Phene Synergism between Root Hair Length and Basal Root Growth Angle for Phosphorus Acquisition1[OPEN

    PubMed Central

    Miguel, Magalhaes Amade

    2015-01-01

    Shallow basal root growth angle (BRGA) increases phosphorus acquisition efficiency by enhancing topsoil foraging because in most soils, phosphorus is concentrated in the topsoil. Root hair length and density (RHL/D) increase phosphorus acquisition by expanding the soil volume subject to phosphorus depletion through diffusion. We hypothesized that shallow BRGA and large RHL/D are synergetic for phosphorus acquisition, meaning that their combined effect is greater than the sum of their individual effects. To evaluate this hypothesis, phosphorus acquisition in the field in Mozambique was compared among recombinant inbred lines of common bean (Phaseolus vulgaris) having four distinct root phenotypes: long root hairs and shallow basal roots, long root hairs and deep basal roots, short root hairs and shallow basal roots, and short root hairs and deep basal roots. The results revealed substantial synergism between BRGA and RHL/D. Compared with short-haired, deep-rooted phenotypes, long root hairs increased shoot biomass under phosphorus stress by 89%, while shallow roots increased shoot biomass by 58%. Genotypes with both long root hairs and shallow roots had 298% greater biomass accumulation than short-haired, deep-rooted phenotypes. Therefore, the utility of shallow basal roots and long root hairs for phosphorus acquisition in combination is twice as large as their additive effects. We conclude that the anatomical phene of long, dense root hairs and the architectural phene of shallower basal root growth are synergetic for phosphorus acquisition. Phene synergism may be common in plant biology and can have substantial importance for plant fitness, as shown here. PMID:25699587

  12. Root-cubing and general root-powering methods for finding the zeros of polynomials

    NASA Technical Reports Server (NTRS)

    Bareiss, E. H.

    1969-01-01

    Mathematical analysis technique generalizes a root squaring and root cubing method into a general root powering method. The introduction of partitioned polynomials into this general root powering method simplifies the coding of the polynomial transformations into input data suitable for processing by computer. The method includes analytic functions.

  13. Application of glutathione to roots selectively inhibits cadmium transport from roots to shoots in oilseed rape

    PubMed Central

    Nakamura, Shin-ichi

    2013-01-01

    Glutathione is a tripeptide involved in various aspects of plant metabolism. This study investigated the effects of the reduced form of glutathione (GSH) applied to specific organs (source leaves, sink leaves, and roots) on cadmium (Cd) distribution and behaviour in the roots of oilseed rape plants (Brassica napus) cultured hydroponically. The translocation ratio of Cd from roots to shoots was significantly lower in plants that had root treatment of GSH than in control plants. GSH applied to roots reduced the Cd concentration in the symplast sap of root cells and inhibited root-to-shoot Cd translocation via xylem vessels significantly. GSH applied to roots also activated Cd efflux from root cells to the hydroponic solution. Inhibition of root-to-shoot translocation of Cd was visualized, and the activation of Cd efflux from root cells was also shown by using a positron-emitting tracer imaging system (PETIS). This study investigated a similar inhibitory effect on root-to-shoot translocation of Cd by the oxidized form of glutathione, GSSG. Inhibition of Cd accumulation by GSH was abolished by a low-temperature treatment. Root cells of plants exposed to GSH in the root zone had less Cd available for xylem loading by actively excluding Cd from the roots. Consequently, root-to-shoot translocation of Cd was suppressed and Cd accumulation in the shoot decreased. PMID:23364937

  14. Estimate of fine root production including the impact of decomposed roots in a Bornean tropical rainforest

    NASA Astrophysics Data System (ADS)

    Katayama, Ayumi; Khoon Koh, Lip; Kume, Tomonori; Makita, Naoki; Matsumoto, Kazuho; Ohashi, Mizue

    2016-04-01

    Considerable carbon is allocated belowground and used for respiration and production of roots. It is reported that approximately 40 % of GPP is allocated belowground in a Bornean tropical rainforest, which is much higher than those in Neotropical rainforests. This may be caused by high root production in this forest. Ingrowth core is a popular method for estimating fine root production, but recent study by Osawa et al. (2012) showed potential underestimates of this method because of the lack of consideration of the impact of decomposed roots. It is important to estimate fine root production with consideration for the decomposed roots, especially in tropics where decomposition rate is higher than other regions. Therefore, objective of this study is to estimate fine root production with consideration of decomposed roots using ingrowth cores and root litter-bag in the tropical rainforest. The study was conducted in Lambir Hills National Park in Borneo. Ingrowth cores and litter bags for fine roots were buried in March 2013. Eighteen ingrowth cores and 27 litter bags were collected in May, September 2013, March 2014 and March 2015, respectively. Fine root production was comparable to aboveground biomass increment and litterfall amount, and accounted only 10% of GPP in this study site, suggesting most of the carbon allocated to belowground might be used for other purposes. Fine root production was comparable to those in Neotropics. Decomposed roots accounted for 18% of fine root production. This result suggests that no consideration of decomposed fine roots may cause underestimate of fine root production.

  15. Light as stress factor to plant roots - case of root halotropism.

    PubMed

    Yokawa, Ken; Fasano, Rossella; Kagenishi, Tomoko; Baluška, František

    2014-01-01

    Despite growing underground, largely in darkness, roots emerge to be very sensitive to light. Recently, several important papers have been published which reveal that plant roots not only express all known light receptors but also that their growth, physiology and adaptive stress responses are light-sensitive. In Arabidopsis, illumination of roots speeds-up root growth via reactive oxygen species-mediated and F-actin dependent process. On the other hand, keeping Arabidopsis roots in darkness alters F-actin distribution, polar localization of PIN proteins as well as polar transport of auxin. Several signaling components activated by phytohormones are overlapping with light-related signaling cascade. We demonstrated that the sensitivity of roots to salinity is altered in the light-grown Arabidopsis roots. Particularly, light-exposed roots are less effective in their salt-avoidance behavior known as root halotropism. Here we discuss these new aspects of light-mediated root behavior from cellular, physiological and evolutionary perspectives.

  16. Five Roots Pattern of Median Nerve Formation.

    PubMed

    Natsis, Konstantinos; Paraskevas, George; Tzika, Maria

    2016-01-01

    An unusual combination of median nerve's variations has been encountered in a male cadaver during routine educational dissection. In particular, the median nerve was formed by five roots; three roots originated from the lateral cord of the brachial plexus joined individually the median nerve's medial root. The latter (fourth) root was united with the lateral (fifth) root of the median nerve forming the median nerve distally in the upper arm and not the axilla as usually. In addition, the median nerve was situated medial to the brachial artery. We review comprehensively the relevant variants, their embryologic development and their potential clinical applications. PMID:27131354

  17. Penis-root perception of Koro patients.

    PubMed

    Chowdhury, A N

    1991-07-01

    Koro is an acute anxiety reaction in which the perception of decreased penis length because of intra-abdominal traction is the main feature. This study attempts to explore the penis-root perception of the Koro patients by a graphomotor projective test--the Draw-a-penis Test (DAPT). This controlled DAPT investigation shows that Koro patients perceived the penis as a detached organ with root-boundary definiteness as evidenced from their close penis-root perception. They also displayed reduced volumetric perception of penis-root than the normal subjects. These perceptual deviations in penis-root image are discussed in relation to their Koro vulnerability.

  18. Modelling root exploration of structured soils

    NASA Astrophysics Data System (ADS)

    Huber, Katrin; Bengough, Glyn; Vanderborght, Jan; Javaux, Mathieu; Vereecken, Harry

    2015-04-01

    To overcome dry spells, plant roots can use macroscopic structures in the soil to reach deeper water reservoirs. We used R-SWMS, an explicit soil- and root water uptake model and integrated different kinds of macropores within the soil domain. Root growth is based on vector addition and influenced by the local soil parameters, e.g. penetrometer resistance or nutrient availability, around a growing root tip. Root water uptake from the macropore-bulk soil interface was simulated with respect to the contact area between roots and bulk soil. The macropore was assumed to be air-filled. A sensitivity analysis with a small domain containing a single macropore showed the influence of macropore inclination, bulk soil density, and root growth parameterisation on root system architecture. A simulation setup with a larger soil domain and a macropore structure derived from a previously grown tap-root system, showed the influence on water uptake. We could compare the simulation results with previously described experimental data from a field study. The simulations could show the feasibility of modelling root growth and water uptake in macroporous soil structures and could give an insight in the impact on the plant water status. Furthermore we were able to show the conditions under which root growth in macropores is useful for plants. As biopores are often coated with nutrient rich material, this modelling approach can also be useful to investigate the benefits of macropores for plant nutrient uptake.

  19. Hydrogenase in actinorhizal root nodules and root nodule homogenates.

    PubMed Central

    Benson, D R; Arp, D J; Burris, R H

    1980-01-01

    Hydrogenases were measured in intact actinorhizal root nodules and from disrupted nodules of Alnus glutinosa, Alnus rhombifolia, Alnus rubra, and Myrica pensylvanica. Whole nodules took up H2 in an O2-dependent reaction. Endophyte preparations oxidized H2 through the oxyhydrogen reaction, but rates were enhanced when hydrogen uptake was coupled to artificial electron acceptors. Oxygen inhibited artifical acceptor-dependent H2 uptake. The hydrogenase system from M. pensylvanica had a different pattern of coupling to various electron acceptors than the hydrogenase systems from the alders; only the bayberry system evolved H2 from reduced viologen dyes. PMID:6989799

  20. Optimal root arrangement of cereal crops

    NASA Astrophysics Data System (ADS)

    Jung, Yeonsu; Park, Keunhwan; Kim, Ho-Young

    2015-11-01

    The plant root absorbs water from the soil and supplies it to the rest part of the plant. It consists of a number of root fibers, through whose surfaces water uptake occurs. There is an intriguing observation that for most of cereal crops such as maize and wheat, the volume density of root in the soil declines exponentially as a function of depth. To understand this empirical finding, we construct a theoretical model of root water uptake, where mass transfer into root surface is modeled just as heat flux around a fin. Agreement between the theoretically predicted optimal root distribution in vertical direction and biological data supports the hypothesis that the plant root has evolved to achieve the optimal water uptake in competition with neighbors. This study has practical implication in the agricultural industry as well as optimal design of water transport networks in both micro- and macroscales. Department of Mechanical and Aerospace Engineering, Seoul National University, Seoul 08826, Korea.

  1. Root cap removal increases root penetration resistance in maize (Zea mays L).

    PubMed

    Iijima, Morio; Higuchi, Toshifumi; Barlow, Peter W; Bengough, A Glyn

    2003-09-01

    The root cap assists the passage of the root through soil by means of its slimy mucilage secretion and by the sloughing of its outer cells. The root penetration resistance of decapped primary roots of maize (Zea mays L. cv. Mephisto) was compared with that of intact roots in loose (dry bulk density 1.0 g cm-3; penetration resistance 0.06 MPa) and compact soil (1.4 g cm-3; penetration resistance 1.0 MPa), to evaluate the contribution of the cap to decreasing the impedance to root growth. Root elongation rate and diameter were the same for decapped and intact roots when the plants were grown in loose soil. In compacted soil, however, the elongation rate of decapped roots was only about half that of intact roots, whilst the diameter was 30% larger. Root penetration resistances of intact and decapped seminal axis were 0.31 and 0.52 MPa, respectively, when the roots were grown in compacted soil. These results indicated that the presence of a root cap alleviates much of the mechanical impedance to root penetration, and enables roots to grow faster in compacted soils. PMID:12885860

  2. Root cap removal increases root penetration resistance in maize (Zea mays L).

    PubMed

    Iijima, Morio; Higuchi, Toshifumi; Barlow, Peter W; Bengough, A Glyn

    2003-09-01

    The root cap assists the passage of the root through soil by means of its slimy mucilage secretion and by the sloughing of its outer cells. The root penetration resistance of decapped primary roots of maize (Zea mays L. cv. Mephisto) was compared with that of intact roots in loose (dry bulk density 1.0 g cm-3; penetration resistance 0.06 MPa) and compact soil (1.4 g cm-3; penetration resistance 1.0 MPa), to evaluate the contribution of the cap to decreasing the impedance to root growth. Root elongation rate and diameter were the same for decapped and intact roots when the plants were grown in loose soil. In compacted soil, however, the elongation rate of decapped roots was only about half that of intact roots, whilst the diameter was 30% larger. Root penetration resistances of intact and decapped seminal axis were 0.31 and 0.52 MPa, respectively, when the roots were grown in compacted soil. These results indicated that the presence of a root cap alleviates much of the mechanical impedance to root penetration, and enables roots to grow faster in compacted soils.

  3. Hydraulic responses of whole vines and individual roots of kiwifruit (Actinidia chinensis) following root severance.

    PubMed

    Black, Marykate Z; Patterson, Kevin J; Minchin, Peter E H; Gould, Kevin S; Clearwater, Michael J

    2011-05-01

    Whole vine (K(plant)) and individual root (K(root)) hydraulic conductances were measured in kiwifruit (Actinidia chinensis Planch. var. chinensis 'Hort16A') vines to observe hydraulic responses following partial root system excision. Heat dissipation and compensation heat pulse techniques were used to measure sap flow in trunks and individual roots, respectively. Sap flux and measurements of xylem pressure potential (Ψ) were used to calculate K(plant) and K(root) in vines with zero and ∼80% of roots severed. Whole vine transpiration (E), Ψ and K(plant) were significantly reduced within 24 h of root pruning, and did not recover within 6 weeks. Sap flux in intact roots increased within 24 h of root pruning, driven by an increase in the pressure gradient between the soil and canopy and without any change in root hydraulic conductance. Photosynthesis (A) and stomatal conductance (g(s)) were reduced, without significant effects on leaf internal CO(2) concentration (c(i)). Shoot growth rates were maintained; fruit growth and dry matter content were increased following pruning. The woody roots of kiwifruit did not demonstrate a rapid dynamic response to root system damage as has been observed previously in monocot seedlings. Increased sap flux in intact roots with no change in K(root) and only a moderate decline in shoot A suggests that under normal growing conditions root hydraulic conductance greatly exceeds requirements for adequate shoot hydration.

  4. Isoflavonoid exudation from white lupin roots is influenced by phosphate supply, root type and cluster-root stage.

    PubMed

    Weisskopf, Laure; Tomasi, Nicola; Santelia, Diana; Martinoia, Enrico; Langlade, Nicolas Bernard; Tabacchi, Raffaele; Abou-Mansour, Eliane

    2006-01-01

    The internal concentration of isoflavonoids in white lupin (Lupinus albus) cluster roots and the exudation of isoflavonoids by these roots were investigated with respect to the effects of phosphorus (P) supply, root type and cluster-root developmental stage. To identify and quantify the major isoflavonoids exuded by white lupin roots, we used high-pressure liquid chromatography (HPLC) coupled to electrospray ionization (ESI) in mass spectrometry (MS). The major exuded isoflavonoids were identified as genistein and hydroxygenistein and their corresponding mono- and diglucoside conjugates. Exudation of isoflavonoids during the incubation period used was higher in P-deficient than in P-sufficient plants and higher in cluster roots than in noncluster roots. The peak of exudation occurred in juvenile and immature cluster roots, while exudation decreased in mature cluster roots.Cluster-root exudation activity was characterized by a burst of isoflavonoids at the stage preceding the peak of organic acid exudation. The potential involvement of ATP-citrate lyase in controlling citrate and isoflavonoid exudation is discussed, as well as the possible impact of phenolics in repelling rhizosphere microbial citrate consumers. PMID:16866966

  5. Root canal treatment of a maxillary first premolar with three roots

    PubMed Central

    Mathew, Josey; Devadathan, Aravindan; Syriac, Gibi; Shamini, Sai

    2015-01-01

    Successful root canal treatment needs a thorough knowledge of both internal and external anatomy of a tooth. Variations in root canal anatomy constitute an impressive challenge to the successful completion of endodontic treatment. Undetected extra roots and canals are a major reason for failed root canal treatment. Three separate roots in a maxillary first premolar have a very low incidence of 0.5–6%. Three rooted premolars are anatomically similar to molars and are sometimes called “small molars or radiculous molars.” This article explains the diagnosis and endodontic management of a three rooted maxillary premolar with separate canals in each root highlighting that statistics may indicate a low incidence of abnormal variations in root canal morphology of a tooth, but aberrant anatomy is a possibility in any tooth. Hence, modern diagnostics like cone beam computed tomography, and endodontic operating microscope may have to be used more for predictable endodontic treatment. PMID:26538958

  6. Foraging strategies in trees of different root morphology: the role of root lifespan.

    PubMed

    Adams, Thomas S; McCormack, M Luke; Eissenstat, David M

    2013-09-01

    Resource exploitation of patches is influenced not simply by the rate of root production in the patches but also by the lifespan of the roots inhabiting the patches. We examined the effect of sustained localized nitrogen (N) fertilization on root lifespan in four tree species that varied widely in root morphology and presumed foraging strategy. The study was conducted in a 12-year-old common garden in central Pennsylvania using a combination of data from minirhizotron and root in-growth cores. The two fine-root tree species, Acer negundo L. and Populus tremuloides Michx., exhibited significant increases in root lifespan with local N fertilization; no significant responses were observed in the two coarse-root tree species, Sassafras albidum Nutt. and Liriodendron tulipifera L. Across species, coarse-root tree species had longer median root lifespan than fine-root tree species. Localized N fertilization did not significantly increase the N concentration or the respiration of the roots growing in the N-rich patch. Our results suggest that some plant species appear to regulate the lifespan of different portions of their root system to improve resource acquisition while other species do not. Our results are discussed in the context of different strategies of foraging of nutrient patches in species of different root morphology.

  7. Patterns in soil fertility and root herbivory interact to influence fine-root dynamics.

    PubMed

    Stevens, Glen N; Jones, Robert H

    2006-03-01

    Fine-scale soil nutrient enrichment typically stimulates root growth, but it may also increase root herbivory, resulting in trade-offs for plant species and potentially influencing carbon cycling patterns. We used root ingrowth cores to investigate the effects of microsite fertility and root herbivory on root biomass in an aggrading upland forest in the coastal plain of South Carolina, USA. Treatments were randomly assigned to cores from a factorial combination of fertilizer and insecticide. Soil, soil fauna, and roots were removed from the cores at the end of the experiment (8-9 mo), and roots were separated at harvest into three diameter classes. Each diameter class responded differently to fertilizer and insecticide treatments. The finest roots (< 1.0 mm diameter), which comprised well over half of all root biomass, were the only ones to respond significantly to both treatments, increasing when fertilizer and when insecticide were added (each P < 0.0001), with maximum biomass found where the treatments were combined (interaction term significant, P < 0.001). These results suggest that root-feeding insects have a strong influence on root standing crop with stronger herbivore impacts on finer roots and within more fertile microsites. Thus, increased vulnerability to root herbivory is a potentially significant cost of root foraging in nutrient-rich patches.

  8. Inhibition of auxin movement from the shoot into the root inhibits lateral root development in Arabidopsis

    NASA Technical Reports Server (NTRS)

    Reed, R. C.; Brady, S. R.; Muday, G. K.

    1998-01-01

    In roots two distinct polar movements of auxin have been reported that may control different developmental and growth events. To test the hypothesis that auxin derived from the shoot and transported toward the root controls lateral root development, the two polarities of auxin transport were uncoupled in Arabidopsis. Local application of the auxin-transport inhibitor naphthylphthalamic acid (NPA) at the root-shoot junction decreased the number and density of lateral roots and reduced the free indoleacetic acid (IAA) levels in the root and [3H]IAA transport into the root. Application of NPA to the basal half of or at several positions along the root only reduced lateral root density in regions that were in contact with NPA or in regions apical to the site of application. Lateral root development was restored by application of IAA apical to NPA application. Lateral root development in Arabidopsis roots was also inhibited by excision of the shoot or dark growth and this inhibition was reversible by IAA. Together, these results are consistent with auxin transport from the shoot into the root controlling lateral root development.

  9. Foraging strategies in trees of different root morphology: the role of root lifespan.

    PubMed

    Adams, Thomas S; McCormack, M Luke; Eissenstat, David M

    2013-09-01

    Resource exploitation of patches is influenced not simply by the rate of root production in the patches but also by the lifespan of the roots inhabiting the patches. We examined the effect of sustained localized nitrogen (N) fertilization on root lifespan in four tree species that varied widely in root morphology and presumed foraging strategy. The study was conducted in a 12-year-old common garden in central Pennsylvania using a combination of data from minirhizotron and root in-growth cores. The two fine-root tree species, Acer negundo L. and Populus tremuloides Michx., exhibited significant increases in root lifespan with local N fertilization; no significant responses were observed in the two coarse-root tree species, Sassafras albidum Nutt. and Liriodendron tulipifera L. Across species, coarse-root tree species had longer median root lifespan than fine-root tree species. Localized N fertilization did not significantly increase the N concentration or the respiration of the roots growing in the N-rich patch. Our results suggest that some plant species appear to regulate the lifespan of different portions of their root system to improve resource acquisition while other species do not. Our results are discussed in the context of different strategies of foraging of nutrient patches in species of different root morphology. PMID:24128849

  10. PATTERNS IN SOIL FERTILITY AND ROOT HERBIVORY INTERACT TO INFLUENCE FINE-ROOT DYNAMICS.

    SciTech Connect

    Stevens, Glen, N.; Jones, Robert, H.

    2006-03-01

    Fine-scale soil nutrient enrichment typically stimulates root growth, but it may also increase root herbivory, resulting in trade-offs for plant species and potentially influencing carbon cycling patterns. We used root ingrowth cores to investigate the effects of microsite fertility and root herbivory on root biomass in an aggrading upland forest in the coastal plain of South Carolina, USA. Treatments were randomly assigned to cores from a factorial combination of fertilizer and insecticide. Soil, soil fauna, and roots were removed from the cores at the end of the experiment (8–9 mo), and roots were separated at harvest into three diameter classes. Each diameter class responded differently to fertilizer and insecticide treatments. The finest roots (,1.0 mm diameter), which comprised well over half of all root biomass, were the only ones to respond significantly to both treatments, increasing when fertilizer and when insecticide were added (each P , 0.0001), with maximum biomass found where the treatments were combined (interaction term significant, P , 0.001). These results suggest that root-feeding insects have a strong influence on root standing crop with stronger herbivore impacts on finer roots and within more fertile microsites. Thus, increased vulnerability to root herbivory is a potentially significant cost of root foraging in nutrient-rich patches.

  11. A statistical approach to root system classification.

    PubMed

    Bodner, Gernot; Leitner, Daniel; Nakhforoosh, Alireza; Sobotik, Monika; Moder, Karl; Kaul, Hans-Peter

    2013-01-01

    Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for "plant functional type" identification in ecology can be applied to the classification of root systems. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. The study demonstrates that principal component based rooting types provide efficient and meaningful multi-trait classifiers. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems) is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Rooting types emerging from measured data, mainly distinguished by diameter/weight and density dominated types. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement techniques are essential. PMID:23914200

  12. A statistical approach to root system classification

    PubMed Central

    Bodner, Gernot; Leitner, Daniel; Nakhforoosh, Alireza; Sobotik, Monika; Moder, Karl; Kaul, Hans-Peter

    2013-01-01

    Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for “plant functional type” identification in ecology can be applied to the classification of root systems. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. The study demonstrates that principal component based rooting types provide efficient and meaningful multi-trait classifiers. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems) is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Rooting types emerging from measured data, mainly distinguished by diameter/weight and density dominated types. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement techniques are essential. PMID:23914200

  13. The Source of Carbon for Root Respiration

    NASA Astrophysics Data System (ADS)

    Cisneros-Dozal, L.; Trumbore, S.; Zheng, S.

    2004-12-01

    In the Enriched Background Isotope Study (EBIS) that took advantage of a whole-ecosystem radiocarbon label that occurred in the temperate forest near Oak Ridge, Tennessee, we measured the radiocarbon signature of total soil respiration, heterotrophic respiration and root respiration, at different times during the last 3 growing seasons (2002-2004). By applying a mass balance approach, the relative and absolute contributions of heterotrophic and root respiration to total soil respiration were estimated. In contrast to heterotrophic respiration, root respiration seemed to be less affected by changes in soil moisture and temperature but rather showed a link to photosynthetic activity with a very similar pattern during the growing season as that of leaf area index. The radiocarbon signature of root respiration was very dynamic with low values in spring compared to the summer. The sources of variation can include changes in the local atmospheric signature and/or changes in the source of C being respired. Two different sites with different values and patterns of local atmospheric radiocarbon signature showed the same pattern in radiocarbon signatures of root respiration indicating that the source of variation was phenological. Low values during the spring could indicate the use of stored carbohydrates switching to more recent photosynthetic products as the summer progresses. As a first attempt to elucidate the source of C respired by roots, we will compare the radiocarbon content of starch, cellulose and soluble sugars in roots to that of bulk root material and root respired CO2. These radiocarbon signatures can help us identify the pool of C that is most likely being respired by roots during the growing season. A better understanding of the source of C for root respiration has implications for understanding the role of root respiration in C cycling in temperate forests, specifically the timescale over which carbon is fixed through photosynthesis and returned to the

  14. Genes controlling root development in rice.

    PubMed

    Mai, Chung D; Phung, Nhung Tp; To, Huong Tm; Gonin, Mathieu; Hoang, Giang T; Nguyen, Khanh L; Do, Vinh N; Courtois, Brigitte; Gantet, Pascal

    2014-12-01

    In this review, we report on the recent developments made using both genetics and functional genomics approaches in the discovery of genes controlling root development in rice. QTL detection in classical biparental mapping populations initially enabled the identification of a very large number of large chromosomal segments carrying root genes. Two segments with large effects have been positionally cloned, allowing the identification of two major genes. One of these genes conferred a tolerance to low phosphate content in soil, while the other conferred a tolerance to drought by controlling root gravitropism, resulting in root system expansion deep in the soil. Findings based on the higher-resolution QTL detection offered by the development of association mapping are discussed. In parallel with genetics approaches, efforts have been made to screen mutant libraries for lines presenting alterations in root development, allowing for the identification of several genes that control different steps of root development, such as crown root and lateral root initiation and emergence, meristem patterning, and the control of root growth. Some of these genes are closely phylogenetically related to Arabidopsis genes involved in the control of lateral root initiation. This close relationship stresses the conservation among plant species of an auxin responsive core gene regulatory network involved in the control of post-embryonic root initiation. In addition, we report on several genetic regulatory pathways that have been described only in rice. The complementarities and the expected convergence of the direct and reverse genetic approaches used to decipher the genetic determinants of root development in rice are discussed in regards to the high diversity characterizing this species and to the adaptations of rice root system architecture to different edaphic environments.

  15. A statistical approach to root system classification.

    PubMed

    Bodner, Gernot; Leitner, Daniel; Nakhforoosh, Alireza; Sobotik, Monika; Moder, Karl; Kaul, Hans-Peter

    2013-01-01

    Plant root systems have a key role in ecology and agronomy. In spite of fast increase in root studies, still there is no classification that allows distinguishing among distinctive characteristics within the diversity of rooting strategies. Our hypothesis is that a multivariate approach for "plant functional type" identification in ecology can be applied to the classification of root systems. The classification method presented is based on a data-defined statistical procedure without a priori decision on the classifiers. The study demonstrates that principal component based rooting types provide efficient and meaningful multi-trait classifiers. The classification method is exemplified with simulated root architectures and morphological field data. Simulated root architectures showed that morphological attributes with spatial distribution parameters capture most distinctive features within root system diversity. While developmental type (tap vs. shoot-borne systems) is a strong, but coarse classifier, topological traits provide the most detailed differentiation among distinctive groups. Adequacy of commonly available morphologic traits for classification is supported by field data. Rooting types emerging from measured data, mainly distinguished by diameter/weight and density dominated types. Similarity of root systems within distinctive groups was the joint result of phylogenetic relation and environmental as well as human selection pressure. We concluded that the data-define classification is appropriate for integration of knowledge obtained with different root measurement methods and at various scales. Currently root morphology is the most promising basis for classification due to widely used common measurement protocols. To capture details of root diversity efforts in architectural measurement techniques are essential.

  16. Root hairs aid soil penetration by anchoring the root surface to pore walls

    PubMed Central

    Bengough, A. Glyn; Loades, Kenneth; McKenzie, Blair M.

    2016-01-01

    The physical role of root hairs in anchoring the root tip during soil penetration was examined. Experiments using a hairless maize mutant (Zea mays: rth3–3) and its wild-type counterpart measured the anchorage force between the primary root of maize and the soil to determine whether root hairs enabled seedling roots in artificial biopores to penetrate sandy loam soil (dry bulk density 1.0–1.5g cm−3). Time-lapse imaging was used to analyse root and seedling displacements in soil adjacent to a transparent Perspex interface. Peak anchorage forces were up to five times greater (2.5N cf. 0.5N) for wild-type roots than for hairless mutants in 1.2g cm−3 soil. Root hair anchorage enabled better soil penetration for 1.0 or 1.2g cm−3 soil, but there was no significant advantage of root hairs in the densest soil (1.5g cm−3). The anchorage force was insufficient to allow root penetration of the denser soil, probably because of less root hair penetration into pore walls and, consequently, poorer adhesion between the root hairs and the pore walls. Hairless seedlings took 33h to anchor themselves compared with 16h for wild-type roots in 1.2g cm−3 soil. Caryopses were often pushed several millimetres out of the soil before the roots became anchored and hairless roots often never became anchored securely.The physical role of root hairs in anchoring the root tip may be important in loose seed beds above more compact soil layers and may also assist root tips to emerge from biopores and penetrate the bulk soil. PMID:26798027

  17. A Rooted Net of Life

    PubMed Central

    2011-01-01

    Abstract Phylogenetic reconstruction using DNA and protein sequences has allowed the reconstruction of evolutionary histories encompassing all life. We present and discuss a means to incorporate much of this rich narrative into a single model that acknowledges the discrete evolutionary units that constitute the organism. Briefly, this Rooted Net of Life genome phylogeny is constructed around an initial, well resolved and rooted tree scaffold inferred from a supermatrix of combined ribosomal genes. Extant sampled ribosomes form the leaves of the tree scaffold. These leaves, but not necessarily the deeper parts of the scaffold, can be considered to represent a genome or pan-genome, and to be associated with members of other gene families within that sequenced (pan)genome. Unrooted phylogenies of gene families containing four or more members are reconstructed and superimposed over the scaffold. Initially, reticulations are formed where incongruities between topologies exist. Given sufficient evidence, edges may then be differentiated as those representing vertical lines of inheritance within lineages and those representing horizontal genetic transfers or endosymbioses between lineages. Reviewers W. Ford Doolittle, Eric Bapteste and Robert Beiko. PMID:21936906

  18. Roots at the percolation threshold

    NASA Astrophysics Data System (ADS)

    Kroener, Eva; Ahmed, Mutez Ali; Carminati, Andrea

    2015-04-01

    The rhizosphere is the layer of soil around the roots where complex and dynamic interactions between plants and soil affect the capacity of plants to take up water. The physical properties of the rhizosphere are affected by mucilage, a gel exuded by roots. Mucilage can absorb large volumes of water, but it becomes hydrophobic after drying. We use a percolation model to describe the rewetting of dry rhizosphere. We find that at a critical mucilage concentration the rhizosphere becomes impermeable. The critical mucilage concentration depends on the radius of the soil particle size. Capillary rise experiments with neutron radiography prove that for concentrations below the critical mucilage concentration water could easily cross the rhizosphere, while above the critical concentration water could no longer percolate through it. Our studies, together with former observations of water dynamics in the rhizosphere, suggest that the rhizosphere is near the percolation threshold, where small variations in mucilage concentration sensitively alter the soil hydraulic conductivity. Is mucilage exudation a plant mechanism to efficiently control the rhizosphere conductivity and the access to water?

  19. Roots at the percolation threshold.

    PubMed

    Kroener, Eva; Ahmed, Mutez Ali; Carminati, Andrea

    2015-04-01

    The rhizosphere is the layer of soil around the roots where complex and dynamic interactions between plants and soil affect the capacity of plants to take up water. The physical properties of the rhizosphere are affected by mucilage, a gel exuded by roots. Mucilage can absorb large volumes of water, but it becomes hydrophobic after drying. We use a percolation model to describe the rewetting of dry rhizosphere. We find that at a critical mucilage concentration the rhizosphere becomes impermeable. The critical mucilage concentration depends on the radius of the soil particle size. Capillary rise experiments with neutron radiography prove that for concentrations below the critical mucilage concentration water could easily cross the rhizosphere, while above the critical concentration water could no longer percolate through it. Our studies, together with former observations of water dynamics in the rhizosphere, suggest that the rhizosphere is near the percolation threshold, where small variations in mucilage concentration sensitively alter the soil hydraulic conductivity. Is mucilage exudation a plant mechanism to efficiently control the rhizosphere conductivity and the access to water? PMID:25974526

  20. Light modulates the root tip excision induced lateral root formation in tomato.

    PubMed

    Thomas, Sherinmol; Sreelakshmi, Yellamaraju; Sharma, Rameshwar

    2014-01-01

    During plant growth and development, root tip performs multifarious functions integrating diverse external and internal stimuli to regulate root elongation and architecture. It is believed that a signal originating from root tip inhibits lateral root formation (LRF). The excision of root tip induced LRF in tomato seedlings associated with accumulation of auxin in pericycle founder cells. The excision of cotyledons slightly reduced LRF, whereas severing shoot from root completely abolished LRF. Exogenous ethylene application did not alter LRF. The response was modulated by light with higher LRF in seedlings exposed to light. Our results indicate that light plays a role in LRF in seedlings by likely modulating shoot derived auxin.

  1. Root phenology in a changing climate.

    PubMed

    Radville, Laura; McCormack, M Luke; Post, Eric; Eissenstat, David M

    2016-06-01

    Plant phenology is one of the strongest indicators of ecological responses to climate change, and altered phenology can have pronounced effects on net primary production, species composition in local communities, greenhouse gas fluxes, and ecosystem processes. Although many studies have shown that aboveground plant phenology advances with warmer temperatures, demonstration of a comparable association for belowground phenology has been lacking because the factors that influence root phenology are poorly understood. Because roots can constitute a large fraction of plant biomass, and root phenology may not respond to warming in the same way as shoots, this represents an important knowledge gap in our understanding of how climate change will influence phenology and plant performance. We review studies of root phenology and provide suggestions to direct future research. Only 29% of examined studies approached root phenology quantitatively, strongly limiting interpretation of results across studies. Therefore, we suggest that researchers emphasize quantitative analyses in future phenological studies. We suggest that root initiation, peak growth, and root cessation may be under different controls. Root initiation and cessation may be more constrained by soil temperature and the timing of carbon availability, whereas the timing of peak root growth may represent trade-offs among competing plant sinks. Roots probably do not experience winter dormancy in the same way as shoots: 89% of the studies that examined winter phenology found evidence of growth during winter months. More research is needed to observe root phenology, and future studies should be careful to capture winter and early season phenology. This should be done quantitatively, with direct observations of root growth utilizing rhizotrons or minirhizotrons. PMID:26931171

  2. Springback and diagravitropism in Merit corn roots.

    PubMed

    Kelly, M O; Leopold, A C

    1992-06-01

    Dark-treated Merit corn (Zea mays L.) roots are diagravitropic and lose curvature upon withdrawal of the gravity stimulus (springback). Springback was not detected in a variety of corn that is orthogravitropic in the dark, nor in Merit roots in which tropistic response was enhanced either with red light or with abscisic acid. A possible interpretation is that springback may be associated with a weak growth response of diagravitropic roots. PMID:11537884

  3. Temperature sensing by primary roots of maize

    NASA Technical Reports Server (NTRS)

    Poff, K. L.

    1990-01-01

    Zea mays L. seedlings, grown on agar plates at 26 degrees C, reoriented the original vertical direction of their primary root when exposed to a thermal gradient applied perpendicular to the gravity vector. The magnitude and direction of curvature can not be explained simply by either a temperature or a humidity effect on root elongation. It is concluded that primary roots of maize sense temperature gradients in addition to sensing the gravitational force.

  4. Springback and diagravitropism in Merit corn roots.

    PubMed Central

    Kelly, M O; Leopold, A C

    1992-01-01

    Dark-treated Merit corn (Zea mays L.) roots are diagravitropic and lose curvature upon withdrawal of the gravity stimulus (springback). Springback was not detected in a variety of corn that is orthogravitropic in the dark, nor in Merit roots in which tropistic response was enhanced either with red light or with abscisic acid. A possible interpretation is that springback may be associated with a weak growth response of diagravitropic roots. PMID:11537884

  5. Advanced Techniques for Root Cause Analysis

    2000-09-19

    Five items make up this package, or can be used individually. The Chronological Safety Management Template utilizes a linear adaptation of the Integrated Safety Management System laid out in the form of a template that greatly enhances the ability of the analyst to perform the first step of any investigation which is to gather all pertinent facts and identify causal factors. The Problem Analysis Tree is a simple three (3) level problem analysis tree whichmore » is easier for organizations outside of WSRC to use. Another part is the Systemic Root Cause Tree. One of the most basic and unique features of Expanded Root Cause Analysis is the Systemic Root Cause portion of the Expanded Root Cause Pyramid. The Systemic Root Causes are even more basic than the Programmatic Root Causes and represent Root Causes that cut across multiple (if not all) programs in an organization. the Systemic Root Cause portion contains 51 causes embedded at the bottom level of a three level Systemic Root Cause Tree that is divided into logical, organizationally based categorie to assist the analyst. The Computer Aided Root Cause Analysis that allows the analyst at each level of the Pyramid to a) obtain a brief description of the cause that is being considered, b) record a decision that the item is applicable, c) proceed to the next level of the Pyramid to see only those items at the next level of the tree that are relevant to the particular cause that has been chosen, and d) at the end of the process automatically print out a summary report of the incident, the causal factors as they relate to the safety management system, the probable causes, apparent causes, Programmatic Root Causes and Systemic Root Causes for each causal factor and the associated corrective action.« less

  6. Water Transport in Maize Roots 1

    PubMed Central

    Steudle, Ernst; Oren, Ram; Schulze, Ernst-Detlef

    1987-01-01

    A root pressure probe has been used to measure the root pressure (Pr) exerted by excised main roots of young maize plants (Zea Mays L.). Defined gradients of hydrostatic and osmotic pressure could be set up between root xylem and medium to induce radial water flows across the root cylinder in both directions. The hydraulic conductivity of the root (Lpr) was evaluated from root pressure relaxations. When permeating solutes were added to the medium, biphasic root pressure relaxations were observed with water and solute phases and root pressure minima (maxima) which allowed the estimation of permeability (PSr) and reflection coefficients (σsr) of roots. Reflection coefficients were: ethanol, 0.27; mannitol, 0.74; sucrose, 0.54; PEG 1000, 0.82; NaCl, 0.64; KNO3, 0.67, and permeability coefficients (in 10−8 meters per second): ethanol, 4.7; sucrose, 1.6; and NaCl, 5.7. Lpr was very different for osmotic and hydrostatic gradients. For hydrostatic gradients Lpr was 1·10−7 meters per second per megapascal, whereas in osmotic experiments the hydraulic conductivity was found to be an order of magnitude lower. For hydrostatic gradients, the exosmotic Lpr was about 15% larger than the endosmotic, whereas in osmotic experiments the polarity in the water movement was reversed. These results either suggest effects of unstirred layers at the osmotic barrier in the root, an asymmetrical barrier, and/or mechanical effects. Measurements of the hydraulic conductivity of individual root cortex cells revealed an Lp similar to Lpr (hydrostatic). It is concluded that, in the presence of external hydrostatic gradients, water moves primarily in the apoplast, whereas in the presence of osmotic gradients this component is much smaller in relation to the cell-to-cell component (symplasmic plus transcellular transport). PMID:16665588

  7. Temperature sensing by primary roots of maize

    SciTech Connect

    Fortin, M.C.A.; Poff, K.L. )

    1990-09-01

    Zea mays L. seedlings, grown on agar plates at 26{degree}C, reoriented the original vertical direction of their primary root when exposed to a thermal gradient applied perpendicular to the gravity vector. The magnitude and direction of curvature can not be explained simply by either a temperature or a humidity effect on root elongation. It is concluded that primary roots of maize sense temperature gradients in addition to sensing the gravitational force.

  8. Springback and diagravitropism in Merit corn roots

    NASA Technical Reports Server (NTRS)

    Kelly, M. O.; Leopold, A. C.

    1992-01-01

    Dark-treated Merit corn (Zea mays L.) roots are diagravitropic and lose curvature upon withdrawal of the gravity stimulus (springback). Springback was not detected in a variety of corn that is orthogravitropic in the dark, nor in Merit roots in which tropistic response was enhanced either with red light or with abscisic acid. A possible interpretation is that springback may be associated with a weak growth response of diagravitropic roots.

  9. Root doctors as providers of primary care.

    PubMed

    Stitt, V J

    1983-07-01

    Physicians in primary care recognize that as many as 65 percent of the patients seen in their offices are there for psychological reasons. In any southern town with a moderate population of blacks, there are at least two "root doctors." These root doctors have mastered the power of autosuggestion and are treating these patients with various forms of medication and psychological counseling. This paper updates the practicing physician on root doctors who practice primary care.

  10. Root Doctors as Providers of Primary Care

    PubMed Central

    Stitt, Van J.

    1983-01-01

    Physicians in primary care recognize that as many as 65 percent of the patients seen in their offices are there for psychological reasons. In any southern town with a moderate population of blacks, there are at least two “root doctors.” These root doctors have mastered the power of autosuggestion and are treating these patients with various forms of medication and psychological counseling. This paper updates the practicing physician on root doctors who practice primary care. PMID:6887277

  11. Characterization of Pearl Millet Root Architecture and Anatomy Reveals Three Types of Lateral Roots

    PubMed Central

    Passot, Sixtine; Gnacko, Fatoumata; Moukouanga, Daniel; Lucas, Mikaël; Guyomarc’h, Soazig; Ortega, Beatriz Moreno; Atkinson, Jonathan A.; Belko, Marème N.; Bennett, Malcolm J.; Gantet, Pascal; Wells, Darren M.; Guédon, Yann; Vigouroux, Yves; Verdeil, Jean-Luc; Muller, Bertrand; Laplaze, Laurent

    2016-01-01

    Pearl millet plays an important role for food security in arid regions of Africa and India. Nevertheless, it is considered an orphan crop as it lags far behind other cereals in terms of genetic improvement efforts. Breeding pearl millet varieties with improved root traits promises to deliver benefits in water and nutrient acquisition. Here, we characterize early pearl millet root system development using several different root phenotyping approaches that include rhizotrons and microCT. We report that early stage pearl millet root system development is characterized by a fast growing primary root that quickly colonizes deeper soil horizons. We also describe root anatomical studies that revealed three distinct types of lateral roots that form on both primary roots and crown roots. Finally, we detected significant variation for two root architectural traits, primary root lenght and lateral root density, in pearl millet inbred lines. This study provides the basis for subsequent genetic experiments to identify loci associated with interesting early root development traits in this important cereal. PMID:27379124

  12. Characterization of Pearl Millet Root Architecture and Anatomy Reveals Three Types of Lateral Roots.

    PubMed

    Passot, Sixtine; Gnacko, Fatoumata; Moukouanga, Daniel; Lucas, Mikaël; Guyomarc'h, Soazig; Ortega, Beatriz Moreno; Atkinson, Jonathan A; Belko, Marème N; Bennett, Malcolm J; Gantet, Pascal; Wells, Darren M; Guédon, Yann; Vigouroux, Yves; Verdeil, Jean-Luc; Muller, Bertrand; Laplaze, Laurent

    2016-01-01

    Pearl millet plays an important role for food security in arid regions of Africa and India. Nevertheless, it is considered an orphan crop as it lags far behind other cereals in terms of genetic improvement efforts. Breeding pearl millet varieties with improved root traits promises to deliver benefits in water and nutrient acquisition. Here, we characterize early pearl millet root system development using several different root phenotyping approaches that include rhizotrons and microCT. We report that early stage pearl millet root system development is characterized by a fast growing primary root that quickly colonizes deeper soil horizons. We also describe root anatomical studies that revealed three distinct types of lateral roots that form on both primary roots and crown roots. Finally, we detected significant variation for two root architectural traits, primary root lenght and lateral root density, in pearl millet inbred lines. This study provides the basis for subsequent genetic experiments to identify loci associated with interesting early root development traits in this important cereal. PMID:27379124

  13. Root-to-Root Travel of the Beneficial Bacterium Azospirillum brasilense†

    PubMed Central

    Bashan, Yoav; Holguin, Gina

    1994-01-01

    The root-to-root travel of the beneficial bacterium Azospirillum brasilense on wheat and soybean roots in agar, sand, and light-textured soil was monitored. We used a motile wild-type (Mot+) strain and a motility-deficient (Mot-) strain which was derived from the wild-type strain. The colonization levels of inoculated roots were similar for the two strains. Mot+ cells moved from inoculated roots (either natural or artificial roots in agar, sand, or light-textured soil) to noninoculated roots, where they formed a band-type colonization composed of bacterial aggregates encircling a limited part of the root, regardless of the plant species. The Mot- strain did not move toward noninoculated roots of either plant species and usually stayed at the inoculation site and root tips. The effect of attractants and repellents was the primary factor governing the motility of Mot+ cells in the presence of adequate water. We propose that interroot travel of A. brasilense is an essential preliminary step in the root-bacterium recognition mechanism. Bacterial motility might have a general role in getting Azospirillum cells to the site where firmer attachment favors colonization of the root system. Azospirillum travel toward plants is a nonspecific active process which is not directly dependent on nutrient deficiency but is a consequence of a nonspecific bacterial chemotaxis, influenced by the balance between attractants and possibly repellents leaked by the root. PMID:16349297

  14. Measurements of water uptake of maize roots: the key function of lateral roots

    NASA Astrophysics Data System (ADS)

    Ahmed, M. A.; Zarebanadkouki, M.; Kroener, E.; Kaestner, A.; Carminati, A.

    2014-12-01

    Maize (Zea mays L.) is one of the most important crop worldwide. Despite its importance, there is limited information on the function of different root segments and root types of maize in extracting water from soils. Therefore, the aim of this study was to investigate locations of root water uptake in maize. We used neutron radiography to: 1) image the spatial distribution of maize roots in soil and 2) trace the transport of injected deuterated water (D2O) in soil and roots. Maizes were grown in aluminum containers (40×38×1 cm) filled with a sandy soil. When the plants were 16 days old, we injected D2O into selected soil regions containing primary, seminal and lateral roots. The experiments were performed during the day (transpiring plants) and night (not transpiring plants). The transport of D2O into roots was simulated using a new convection-diffusion numerical model of D2O transport into roots. By fitting the observed D2O transport we quantified the diffusional permeability and the water uptake of the different root segments. The maize root architecture consisted of a primary root, 4-5 seminal roots and many lateral roots connected to the primary and seminal roots. Laterals emerged from the proximal 15 cm of the primary and seminal roots. Water uptake occurred primarily in lateral roots. Lateral roots had the highest diffusional permeability (9.4×10-7), which was around six times higher that the diffusional permeability of the old seminal segments (1.4×10-7), and two times higher than the diffusional permeability of the young seminal segments (4.7×10-7). The radial flow of D2O into the lateral (6.7×10-5 ) was much higher than in the young seminal roots (1.1×10-12). The radial flow of D2O into the old seminal was negligible. We concluded that the function of the primary and seminal roots was to collect water from the lateral roots and transport it to the shoot. A maize root system with lateral roots branching from deep primary and seminal roots would be

  15. Devil's claw root: ulcers and gastrointestinal bleeding?

    PubMed

    2013-12-01

    Harpagophytum procumbens, or devil's claw, is an African plant whose root is used to relieve minor joint symptoms. Several cases of gastrointestinal bleeding associated with the use of devil's claw root have been reported. A systematic review of the adverse effects of devil's claw root in about 20 randomised, double-blind, placebo-controlled clinical trials showed mainly gastrointestinal effects: gastralgia and dyspepsia. In practice, devil's claw root exposes patients to the risk of sometimes serious upper gastrointestinal disorders, yet has no established efficacy beyond a placebo effect. It is best avoided. PMID:24600731

  16. Genetic ablation of root cap cells in Arabidopsis

    NASA Technical Reports Server (NTRS)

    Tsugeki, R.; Fedoroff, N. V.

    1999-01-01

    The root cap is increasingly appreciated as a complex and dynamic plant organ. Root caps sense and transmit environmental signals, synthesize and secrete small molecules and macromolecules, and in some species shed metabolically active cells. However, it is not known whether root caps are essential for normal shoot and root development. We report the identification of a root cap-specific promoter and describe its use to genetically ablate root caps by directing root cap-specific expression of a diphtheria toxin A-chain gene. Transgenic toxin-expressing plants are viable and have normal aerial parts but agravitropic roots, implying loss of root cap function. Several cell layers are missing from the transgenic root caps, and the remaining cells are abnormal. Although the radial organization of the roots is normal in toxin-expressing plants, the root tips have fewer cytoplasmically dense cells than do wild-type root tips, suggesting that root meristematic activity is lower in transgenic than in wild-type plants. The roots of transgenic plants have more lateral roots and these are, in turn, more highly branched than those of wild-type plants. Thus, root cap ablation alters root architecture both by inhibiting root meristematic activity and by stimulating lateral root initiation. These observations imply that the root caps contain essential components of the signaling system that determines root architecture.

  17. Mineral nutrition and adventitious rooting in microcuttings of Eucalyptus globulus.

    PubMed

    Schwambach, Joséli; Fadanelli, Cristina; Fett-Neto, Arthur G

    2005-04-01

    We characterized the adventitious rooting response of Eucalyptus globulus Labill. to various concentrations of calcium, nitrogen, phosphorus, iron, manganese, zinc, boron and copper. The parameters analyzed were percent rooting, root number, root length and mean rooting time. Root number and root length were significantly affected by mineral nutrition, whereas mean rooting time and rooting percentage seemed to be closely related to auxin availability. Root number was affected by calcium, nitrogen source and zinc, whereas root length was influenced by concentrations of phosphorus, iron and manganese, and by nitrogen source. Based on these results, we evaluated various combinations of several concentrations of these minerals in each rooting phase. Cuttings that were rooted in an optimized mineral nutrient medium and acclimatized to ex-vitro conditions for two months showed significantly higher survival after transplanting and drought stress than cuttings rooted in basal medium and treated in the same way.

  18. Root-growth-inhibiting sheet

    DOEpatents

    Burton, Frederick G.; Cataldo, Dominic A.; Cline, John F.; Skiens, W. Eugene; Van Voris, Peter

    1993-01-01

    In accordance with this invention, a porous sheet material is provided at intervals with bodies of a polymer which contain a 2,6-dinitroaniline. The sheet material is made porous to permit free passage of water. It may be either a perforated sheet or a woven or non-woven textile material. A particularly desirable embodiment is a non-woven fabric of non-biodegradable material. This type of material is known as a "geotextile" and is used for weed control, prevention of erosion on slopes, and other landscaping purposes. In order to obtain a root repelling property, a dinitroaniline is blended with a polymer which is attached to the geotextile or other porous material.

  19. Root-growth-inhibiting sheet

    DOEpatents

    Burton, F.G.; Cataldo, D.A.; Cline, J.F.; Skiens, W.E.; Van Voris, P.

    1993-01-26

    In accordance with this invention, a porous sheet material is provided at intervals with bodies of a polymer which contain a 2,6-dinitroaniline. The sheet material is made porous to permit free passage of water. It may be either a perforated sheet or a woven or non-woven textile material. A particularly desirable embodiment is a non-woven fabric of non-biodegradable material. This type of material is known as a geotextile'' and is used for weed control, prevention of erosion on slopes, and other landscaping purposes. In order to obtain a root repelling property, a dinitroaniline is blended with a polymer which is attached to the geotextile or other porous material.

  20. ROOT CAUSE ANALYSIS PROGRAM MANUAL

    SciTech Connect

    Gravois, Melanie C.

    2007-05-02

    Root Cause Analysis (RCA) identifies the cause of an adverse condition that, if corrected, will preclude recurrence or greatly reduce the probability of recurrence of the same or similar adverse conditions and thereby protect the health and safety of the public, the workers, and the environment. This procedure sets forth the requirements for management determination and the selection of RCA methods and implementation of RCAs that are a result of significant findings from Price-Anderson Amendments Act (PAAA) violations, occurrences/events, Significant Adverse Conditions, and external oversight Corrective Action Requests (CARs) generated by the Office of Enforcement (PAAA headquarters), the U.S. Environmental Protection Agency, and other oversight entities against Lawrence Berkeley National Laboratory (LBNL). Performance of an RCA may result in the identification of issues that should be reported in accordance with the Issues Management Program Manual.

  1. Piriformospora indica root colonization triggers local and systemic root responses and inhibits secondary colonization of distal roots.

    PubMed

    Pedrotti, Lorenzo; Mueller, Martin J; Waller, Frank

    2013-01-01

    Piriformosporaindica is a basidiomycete fungus colonizing roots of a wide range of higher plants, including crop plants and the model plant Arabidopsis thaliana. Previous studies have shown that P. indica improves growth, and enhances systemic pathogen resistance in leaves of host plants. To investigate systemic effects within the root system, we established a hydroponic split-root cultivation system for Arabidopsis. Using quantitative real-time PCR, we show that initial P. indica colonization triggers a local, transient response of several defense-related transcripts, of which some were also induced in shoots and in distal, non-colonized roots of the same plant. Systemic effects on distal roots included the inhibition of secondary P. indica colonization. Faster and stronger induction of defense-related transcripts during secondary inoculation revealed that a P. indica pretreatment triggers root-wide priming of defense responses, which could cause the observed reduction of secondary colonization levels. Secondary P. indica colonization also induced defense responses in distant, already colonized parts of the root. Endophytic fungi therefore trigger a spatially specific response in directly colonized and in systemic root tissues of host plants.

  2. Root-soil relationships and terroir

    NASA Astrophysics Data System (ADS)

    Tomasi, Diego

    2015-04-01

    Soil features, along with climate, are among the most important determinants of a succesful grape production in a certain area. Most of the studies, so far, investigated the above-ground vine response to differente edaphic and climate condition, but it is clearly not sufficient to explain the vine whole behaviour. In fact, roots represent an important part of the terroir system (soil-plant-atmosphere-man), and their study can provide better comprehension of vine responses to different environments. The root density and distribution, the ability of deep-rooting and regenerating new roots are good indicators of root well-being, and represents the basis for an efficient physiological activity of the root system. Root deepening and distribution are strongly dependent and sensitive on soil type and soil properties, while root density is affected mostly by canopy size, rootstock and water availability. According to root well-being, soil management strategies should alleviate soil impediments, improving aeration and microbial activity. Moreover, agronomic practices can impact root system performance and influence the above-ground growth. It is well known, for example, that the root system size is largely diminished by high planting densities. Close vine spacings stimulate a more effective utilization of the available soil, water and nutrients, but if the competition for available soil becomes too high, it can repress vine growth, and compromise vineyard longevity, productivity and reaction to growing season weather. Development of resilient rootstocks, more efficient in terms of water and nutrient uptake and capable of dealing with climate and soil extremes (drought, high salinity) are primary goals fore future research. The use of these rootstocks will benefit a more sustainable use of the soil resources and the preservation and valorisation of the terroir.

  3. Malformations of the tooth root in humans.

    PubMed

    Luder, Hans U

    2015-01-01

    The most common root malformations in humans arise from either developmental disorders of the root alone or disorders of radicular development as part of a general tooth dysplasia. The aim of this review is to relate the characteristics of these root malformations to potentially disrupted processes involved in radicular morphogenesis. Radicular morphogenesis proceeds under the control of Hertwig's epithelial root sheath (HERS) which determines the number, length, and shape of the root, induces the formation of radicular dentin, and participates in the development of root cementum. Formation of HERS at the transition from crown to root development appears to be very insensitive to adverse effects, with the result that rootless teeth are extremely rare. In contrast, shortened roots as a consequence of impaired or prematurely halted apical growth of HERS constitute the most prevalent radicular dysplasia which occurs due to trauma and unknown reasons as well as in association with dentin disorders. While odontoblast differentiation inevitably stops when growth of HERS is arrested, it seems to be unaffected even in cases of severe dentin dysplasias such as regional odontodysplasia and dentin dysplasia type I. As a result radicular dentin formation is at least initiated and progresses for a limited time. The only condition affecting cementogenesis is hypophosphatasia which disrupts the formation of acellular cementum through an inhibition of mineralization. A process particularly susceptible to adverse effects appears to be the formation of the furcation in multirooted teeth. Impairment or disruption of this process entails taurodontism, single-rooted posterior teeth, and misshapen furcations. Thus, even though many characteristics of human root malformations can be related to disorders of specific processes involved in radicular morphogenesis, precise inferences as to the pathogenesis of these dysplasias are hampered by the still limited knowledge on root formation

  4. Malformations of the tooth root in humans

    PubMed Central

    Luder, Hans U.

    2015-01-01

    The most common root malformations in humans arise from either developmental disorders of the root alone or disorders of radicular development as part of a general tooth dysplasia. The aim of this review is to relate the characteristics of these root malformations to potentially disrupted processes involved in radicular morphogenesis. Radicular morphogenesis proceeds under the control of Hertwig's epithelial root sheath (HERS) which determines the number, length, and shape of the root, induces the formation of radicular dentin, and participates in the development of root cementum. Formation of HERS at the transition from crown to root development appears to be very insensitive to adverse effects, with the result that rootless teeth are extremely rare. In contrast, shortened roots as a consequence of impaired or prematurely halted apical growth of HERS constitute the most prevalent radicular dysplasia which occurs due to trauma and unknown reasons as well as in association with dentin disorders. While odontoblast differentiation inevitably stops when growth of HERS is arrested, it seems to be unaffected even in cases of severe dentin dysplasias such as regional odontodysplasia and dentin dysplasia type I. As a result radicular dentin formation is at least initiated and progresses for a limited time. The only condition affecting cementogenesis is hypophosphatasia which disrupts the formation of acellular cementum through an inhibition of mineralization. A process particularly susceptible to adverse effects appears to be the formation of the furcation in multirooted teeth. Impairment or disruption of this process entails taurodontism, single-rooted posterior teeth, and misshapen furcations. Thus, even though many characteristics of human root malformations can be related to disorders of specific processes involved in radicular morphogenesis, precise inferences as to the pathogenesis of these dysplasias are hampered by the still limited knowledge on root formation

  5. [Effects of root zone hypoxia on respiratory metabolism of cucumber seedlings roots].

    PubMed

    Kang, Yun-Yan; Guo, Shi-Rong; Duan, Jiu-Ju

    2008-03-01

    With the seedlings of Lübachun No. 4, a hypoxia-resistant cultivar, and Zhongnong No. 8, a hypoxia-sensitive cultivar, as test materials, and by the method of solution culture, this paper studied the effects of root zone hypoxia on their roots' respiratory metabolism. The results showed that root zone hypoxia inhibited the tricarboxylic acid (TCA) cycle significantly, But accelerated the anaerobic respiration of cucumber roots. Under root zone hypoxia stress, the decrement of succinic dehydrogenase (SDH) and isocitric dehydrogenase (IDH) activities and the increment of lactate dehydrogenase (LDH) activity and lactate and pyruvate contents were lesser in Lübachun No. 4 than in Zhongnong No. 8 seedlings roots, but conversely, the increment of pyruvate decarboxylase (PDC) and alcohol dehydrogenase (ADH) activities and alcohol and alanine contents in Lübachun No. 4 seedlings roots were higher than those in Zhongnong No. 8 seedlings roots. On the 8th day of hypoxia stress, the ADH activity and alcohol and alanine contents increased by 409.30%, 112.13% and 30.64% in Lübachun No. 4 roots and by 110.42%, 31.84% and 4.78% in Zhongnong No. 8 roots, respectively, compared with the control. No significant differences in the alanine aminotransferase (AlaAT) activity and acetaldehyde content were observed between the two cultivars. It was concluded that the acceleration of alcohol fermentation and the accumulation of alanine were in favor of the enhancement of root zone hypoxia tolerance of cucumber roots.

  6. Effect of Root Moisture Content and Diameter on Root Tensile Properties

    PubMed Central

    Yang, Yuanjun; Chen, Lihua; Li, Ning; Zhang, Qiufen

    2016-01-01

    The stabilization of slopes by vegetation has been a topical issue for many years. Root mechanical characteristics significantly influence soil reinforcement; therefore it is necessary to research into the indicators of root tensile properties. In this study, we explored the influence of root moisture content on tensile resistance and strength with different root diameters and for different tree species. Betula platyphylla, Quercus mongolica, Pinus tabulaeformis, and Larix gmelinii, the most popular tree species used for slope stabilization in the rocky mountainous areas of northern China, were used in this study. A tensile test was conducted after root samples were grouped by diameter and moisture content. The results showedthat:1) root moisture content had a significant influence on tensile properties; 2) slightly loss of root moisture content could enhance tensile strength, but too much loss of water resulted in weaker capacity for root elongation, and consequently reduced tensile strength; 3) root diameter had a strong positive correlation with tensile resistance; and4) the roots of Betula platyphylla had the best tensile properties when both diameter and moisture content being controlled. These findings improve our understanding of root tensile properties with root size and moisture, and could be useful for slope stabilization using vegetation. PMID:27003872

  7. Effect of Root Moisture Content and Diameter on Root Tensile Properties.

    PubMed

    Yang, Yuanjun; Chen, Lihua; Li, Ning; Zhang, Qiufen

    2016-01-01

    The stabilization of slopes by vegetation has been a topical issue for many years. Root mechanical characteristics significantly influence soil reinforcement; therefore it is necessary to research into the indicators of root tensile properties. In this study, we explored the influence of root moisture content on tensile resistance and strength with different root diameters and for different tree species. Betula platyphylla, Quercus mongolica, Pinus tabulaeformis, and Larix gmelinii, the most popular tree species used for slope stabilization in the rocky mountainous areas of northern China, were used in this study. A tensile test was conducted after root samples were grouped by diameter and moisture content. The results showedthat:1) root moisture content had a significant influence on tensile properties; 2) slightly loss of root moisture content could enhance tensile strength, but too much loss of water resulted in weaker capacity for root elongation, and consequently reduced tensile strength; 3) root diameter had a strong positive correlation with tensile resistance; and4) the roots of Betula platyphylla had the best tensile properties when both diameter and moisture content being controlled. These findings improve our understanding of root tensile properties with root size and moisture, and could be useful for slope stabilization using vegetation. PMID:27003872

  8. Root susceptibility and inoculum production from roots of eastern oak species to Phytophthora ramorum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Little is known about root susceptibility of eastern tree species to Phytophthora ramorum. In this study, we examined root susceptibility and inoculum production from roots. Oak radicles of several eastern oak species were exposed to zoospore suspensions of 1, 10, 100, or 1000 zoospores per ml at ...

  9. Root susceptibility and inoculum production from roots of Eastern United States oak species to Phytophthora ramorum

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Little is known about root susceptibility of eastern U.S. tree species to Phytophthora ramorum. In this study, we examined root susceptibility and inoculum production from roots. Sprouted acorns of Q. rubra, Q. palustrus, Q. coccinia, Q. alba, Q. michauxii and Q. prinus were exposed to motile zoos...

  10. Effect of Root Moisture Content and Diameter on Root Tensile Properties.

    PubMed

    Yang, Yuanjun; Chen, Lihua; Li, Ning; Zhang, Qiufen

    2016-01-01

    The stabilization of slopes by vegetation has been a topical issue for many years. Root mechanical characteristics significantly influence soil reinforcement; therefore it is necessary to research into the indicators of root tensile properties. In this study, we explored the influence of root moisture content on tensile resistance and strength with different root diameters and for different tree species. Betula platyphylla, Quercus mongolica, Pinus tabulaeformis, and Larix gmelinii, the most popular tree species used for slope stabilization in the rocky mountainous areas of northern China, were used in this study. A tensile test was conducted after root samples were grouped by diameter and moisture content. The results showedthat:1) root moisture content had a significant influence on tensile properties; 2) slightly loss of root moisture content could enhance tensile strength, but too much loss of water resulted in weaker capacity for root elongation, and consequently reduced tensile strength; 3) root diameter had a strong positive correlation with tensile resistance; and4) the roots of Betula platyphylla had the best tensile properties when both diameter and moisture content being controlled. These findings improve our understanding of root tensile properties with root size and moisture, and could be useful for slope stabilization using vegetation.

  11. Coupling root architecture and pore network modeling - an attempt towards better understanding root-soil interactions

    NASA Astrophysics Data System (ADS)

    Leitner, Daniel; Bodner, Gernot; Raoof, Amir

    2013-04-01

    Understanding root-soil interactions is of high importance for environmental and agricultural management. Root uptake is an essential component in water and solute transport modeling. The amount of groundwater recharge and solute leaching significantly depends on the demand based plant extraction via its root system. Plant uptake however not only responds to the potential demand, but in most situations is limited by supply form the soil. The ability of the plant to access water and solutes in the soil is governed mainly by root distribution. Particularly under conditions of heterogeneous distribution of water and solutes in the soil, it is essential to capture the interaction between soil and roots. Root architecture models allow studying plant uptake from soil by describing growth and branching of root axes in the soil. Currently root architecture models are able to respond dynamically to water and nutrient distribution in the soil by directed growth (tropism), modified branching and enhanced exudation. The porous soil medium as rooting environment in these models is generally described by classical macroscopic water retention and sorption models, average over the pore scale. In our opinion this simplified description of the root growth medium implies several shortcomings for better understanding root-soil interactions: (i) It is well known that roots grow preferentially in preexisting pores, particularly in more rigid/dry soil. Thus the pore network contributes to the architectural form of the root system; (ii) roots themselves can influence the pore network by creating preferential flow paths (biopores) which are an essential element of structural porosity with strong impact on transport processes; (iii) plant uptake depend on both the spatial location of water/solutes in the pore network as well as the spatial distribution of roots. We therefore consider that for advancing our understanding in root-soil interactions, we need not only to extend our root models

  12. Effect of Root System Morphology on Root-sprouting and Shoot-rooting Abilities in 123 Plant Species from Eroded Lands in North-east Spain

    PubMed Central

    GUERRERO-CAMPO, JOAQUÍN; PALACIO, SARA; PÉREZ-RONTOMÉ, CARMEN; MONTSERRAT-MARTÍ, GABRIEL

    2006-01-01

    • Background and Aims The objective of this study was to test whether the mean values of several root morphological variables were related to the ability to develop root-borne shoots and/or shoot-borne roots in a wide range of vascular plants. • Methods A comparative study was carried out on the 123 most common plant species from eroded lands in north-east Spain. After careful excavations in the field, measurements were taken of the maximum root depth, absolute and relative basal root diameter, specific root length (SRL), and the root depth/root lateral spread ratio on at least three individuals per species. Shoot-rooting and root-sprouting were observed in a large number of individuals in many eroded and sedimentary environments. The effect of life history and phylogeny on shoot-rooting and root-sprouting abilities was also analysed. • Key Results The species with coarse and deep tap-roots tended to be root-sprouting and those with fine, fasciculate and long main roots (which generally spread laterally), tended to be shoot-rooting. Phylogeny had an important influence on root system morphology and shoot-rooting and root-sprouting capacities. However, the above relations stood after applying analyses based on phylogenetically independent contrasts (PICs). • Conclusions The main morphological features of the root system of the study species are related to their ability to sprout from their roots and form roots from their shoots. According to the results, such abilities might only be functionally viable in restricted root system morphologies and ecological strategies. PMID:16790468

  13. Maize root characteristis that enhance flooding tolerance

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Plant root systems have several cellular and molecular adaptations that are important in reducing stress caused by flooding. Of these, two physical properties of root systems provide an initial barrier toward the avoidance of stress. These are the presence of aerenchyma cells and rapid adventitious ...

  14. Cytological and ultrastructural studies on root tissues

    NASA Technical Reports Server (NTRS)

    Slocum, R. D.; Gaynor, J. J.; Galston, A. W.

    1984-01-01

    The anatomy and fine structure of roots from oat and mung bean seedlings, grown under microgravity conditions for 8 days aboard the Space Shuttle, was examined and compared to that of roots from ground control plants grown under similar conditions. Roots from both sets of oat seedlings exhibited characteristic monocotyledonous tissue organization and normal ultrastructural features, except for cortex cell mitochondria, which exhibited a 'swollen' morphology. Various stages of cell division were observed in the meristematic tissues of oat roots. Ground control and flight-grown mung bean roots also showed normal tissue organization, but root cap cells in the flight-grown roots were collapsed and degraded in appearance, especially at the cap periphery. At the ultrastructural level, these cells exhibited a loss of organelle integrity and a highly-condensed cytoplasm. This latter observation perhaps suggests a differing tissue sensitivity for the two species to growth conditions employed in space flight. The basis for abnormal root cap cell development is not understood, but the loss of these putative gravity-sensing cells holds potential significance for long term plant growth orientation during space flight.

  15. Enhancing Students' Understanding of Square Roots

    ERIC Educational Resources Information Center

    Wiesman, Jeff L.

    2015-01-01

    Students enrolled in a middle school prealgebra or algebra course often struggle to conceptualize and understand the meaning of radical notation when it is introduced. For example, although it is important for students to approximate the decimal value of a number such as [square root of] 30 and estimate the value of a square root in the form of…

  16. ACETOGENIC BACTERIA ASSOCIATED WITH SEAGRASS ROOTS

    EPA Science Inventory

    Seagrasses are adapted to being rooted in reduced, anoxic sediments with high rates of sulfate reduction. During the day, an oxygen gradient is generated around the roots, becoming anoxic at night. Thus, obligate anaerobic bacteria in the rhizosphere have to tolerate elevated oxy...

  17. 33 CFR 117.1095 - Root River.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 33 Navigation and Navigable Waters 1 2010-07-01 2010-07-01 false Root River. 117.1095 Section 117.1095 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1095 Root River. (a) The draw of the Main...

  18. 33 CFR 117.1095 - Root River.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 33 Navigation and Navigable Waters 1 2012-07-01 2012-07-01 false Root River. 117.1095 Section 117.1095 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1095 Root River. (a) The draw of the Main...

  19. 33 CFR 117.1095 - Root River.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 33 Navigation and Navigable Waters 1 2013-07-01 2013-07-01 false Root River. 117.1095 Section 117.1095 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1095 Root River. (a) The draw of the Main...

  20. 33 CFR 117.1095 - Root River.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 33 Navigation and Navigable Waters 1 2014-07-01 2014-07-01 false Root River. 117.1095 Section 117.1095 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1095 Root River. (a) The draw of the Main...

  1. 33 CFR 117.1095 - Root River.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 33 Navigation and Navigable Waters 1 2011-07-01 2011-07-01 false Root River. 117.1095 Section 117.1095 Navigation and Navigable Waters COAST GUARD, DEPARTMENT OF HOMELAND SECURITY BRIDGES DRAWBRIDGE OPERATION REGULATIONS Specific Requirements Wisconsin § 117.1095 Root River. (a) The draw of the Main...

  2. Indoleacetic acid movement in the root cap.

    PubMed

    Pernet, J J; Pilet, P E

    1976-01-01

    When applied on the root cap of Zea mays L., indol-3yl-acetic acid (IAA) may enter the root tip and move basipetally inside the cap. From the cap to the apex (quiescent centre and meristem) the IAA transport is very slow. Polarity of IAA movement, in relation to growth, is discussed.

  3. ADVANCING FINE ROOT RESEARCH WITH MINIRHIZOTRONS

    EPA Science Inventory

    Minirhizotrons provide a nondestructive, in situ method for directly viewing and studying fine roots. Although many insights into fine roots have been gained using minirhizotrons, it is clear from the literature that there is still wide variation in how minirhizotrons and minirhi...

  4. Method for Constructing Standardized Simulated Root Canals.

    ERIC Educational Resources Information Center

    Schulz-Bongert, Udo; Weine, Franklin S.

    1990-01-01

    The construction of visual and manipulative aids, clear resin blocks with root-canal-like spaces, for simulation of root canals is explained. Time, materials, and techniques are discussed. The method allows for comparison of canals, creation of any configuration of canals, and easy presentation during instruction. (MSE)

  5. Rapid phenotyping of alfalfa root system architecture

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Root system architecture (RSA) influences the capacity of an alfalfa plant for symbiotic nitrogen fixation, nutrient uptake and water use efficiency, resistance to frost heaving, winterhardiness, and some pest and pathogen resistance. However, we currently lack a basic understanding of root system d...

  6. Fate of HERS during Tooth Root Development

    PubMed Central

    Huang, Xiaofeng; Bringas, Pablo; Slavkin, Harold C.; Chai, Yang

    2009-01-01

    Tooth root development begins after the completion of crown formation in mammals. Previous studies have shown that Hertwig's epithelial root sheath (HERS) plays an important role in root development, but the fate of HERS has remained unknown. In order to investigate the morphological fate and analyze the dynamic movement of HERS cells in vivo, we generated K14-Cre;R26R mice. HERS cells are detectable on the surface of the root throughout root formation and do not disappear. Most of the HERS cells are attached to the surface of the cementum, and others separate to become the epithelial rest of Malasez. HERS cells secrete extracellular matrix components onto the surface of the dentin before dental follicle cells penetrate the HERS network to contact dentin. HERS cells also participate in the cementum development and may differentiate into cementocytes. During root development, the HERS is not interrupted, and instead the HERS cells continue to communicate with each other through the network structure. Furthermore, HERS cells interact with cranial neural crest derived mesenchyme to guide root development. Taken together, the network of HERS cells is crucial for tooth root development. PMID:19576204

  7. Plant root research: the past, the present and the future

    PubMed Central

    Lux, Alexander; Rost, Thomas L.

    2012-01-01

    This special issue is dedicated to root biologists past and present who have been exploring all aspects of root structure and function with an extensive publication record going over 100 years. The content of the Special Issue on Root Biology covers a wide scale of contributions, spanning interactions of roots with microorganisms in the rhizosphere, the anatomy of root cells and tissues, the subcellular components of root cells, and aspects of metal accumulation and stresses on root function and structure. We have organized the papers into three topic categories: (1) root ecology, interactions with microbes, root architecture and the rhizosphere; (2) experimental root biology, root structure and physiology; and (3) applications of new technology to study root biology. Finally, we will speculate on root research for the future. PMID:22966495

  8. Branching out in roots: uncovering form, function, and regulation.

    PubMed

    Atkinson, Jonathan A; Rasmussen, Amanda; Traini, Richard; Voß, Ute; Sturrock, Craig; Mooney, Sacha J; Wells, Darren M; Bennett, Malcolm J

    2014-10-01

    Root branching is critical for plants to secure anchorage and ensure the supply of water, minerals, and nutrients. To date, research on root branching has focused on lateral root development in young seedlings. However, many other programs of postembryonic root organogenesis exist in angiosperms. In cereal crops, the majority of the mature root system is composed of several classes of adventitious roots that include crown roots and brace roots. In this Update, we initially describe the diversity of postembryonic root forms. Next, we review recent advances in our understanding of the genes, signals, and mechanisms regulating lateral root and adventitious root branching in the plant models Arabidopsis (Arabidopsis thaliana), maize (Zea mays), and rice (Oryza sativa). While many common signals, regulatory components, and mechanisms have been identified that control the initiation, morphogenesis, and emergence of new lateral and adventitious root organs, much more remains to be done. We conclude by discussing the challenges and opportunities facing root branching research. PMID:25136060

  9. Branching Out in Roots: Uncovering Form, Function, and Regulation1

    PubMed Central

    Atkinson, Jonathan A.; Rasmussen, Amanda; Traini, Richard; Voß, Ute; Sturrock, Craig; Mooney, Sacha J.; Wells, Darren M.; Bennett, Malcolm J.

    2014-01-01

    Root branching is critical for plants to secure anchorage and ensure the supply of water, minerals, and nutrients. To date, research on root branching has focused on lateral root development in young seedlings. However, many other programs of postembryonic root organogenesis exist in angiosperms. In cereal crops, the majority of the mature root system is composed of several classes of adventitious roots that include crown roots and brace roots. In this Update, we initially describe the diversity of postembryonic root forms. Next, we review recent advances in our understanding of the genes, signals, and mechanisms regulating lateral root and adventitious root branching in the plant models Arabidopsis (Arabidopsis thaliana), maize (Zea mays), and rice (Oryza sativa). While many common signals, regulatory components, and mechanisms have been identified that control the initiation, morphogenesis, and emergence of new lateral and adventitious root organs, much more remains to be done. We conclude by discussing the challenges and opportunities facing root branching research. PMID:25136060

  10. Healing after root reimplantation in the monkey.

    PubMed

    Houston, F; Sarhed, G; Nyman, S; Lindhe, J; Karring, T

    1985-10-01

    The aim of the present investigation was to evaluate the regenerative potential of the periodontal tissues following tooth reimplantation using a model which excluded the dentogingival epithelium from the process of healing. Maxillary and mandibular incisors, premolars and molars of 5 monkeys were used. Following root filling of all experimental teeth, the teeth were divided into 3 experimental groups. In 1 group, the teeth were extracted following the elevation of full thickness flaps. The crowns were separated from the roots at the level of the buccal cemento-enamel junction and the roots immediately reimplanted into their sockets. The flaps were replaced and sutured to accomplish complete coverage of the roots. In a 2nd group, the teeth were subjected to the same experimental procedure, but in addition, the buccal alveolar bone was removed to about half its original height prior to root reimplantation. The teeth of the 3rd group were subjected to identical experimental procedures as for group II with the addition that the buccal root surfaces were planed to the level of the surgically created bone crest. The animals were sacrificed after 6 months of healing. The jaws were removed and histological specimens prepared for microscopic examination. The results showed that a complete fibrous re-attachment formed onto roots on which the original periodontal ligament tissue was preserved. This occurred irrespective of whether the roots were reimplanted into sockets with normal (group I) or reduced (group II) bone height. When the original periodontal ligament tissue was removed by root planing before reimplantation (group III), healing resulted in a significant amount of new connective tissue attachment. However, coronal to the newly formed fibrous attachment, the root surface frequently showed signs of resorption and particularly so in those roots which remained covered by the soft tissue during the entire course of healing. In the majority of the roots which

  11. Plant Root Growth In Granular Media

    NASA Astrophysics Data System (ADS)

    Wendell, Dawn; Hosoi, Peko

    2010-03-01

    Roots grow in a variety of granular substrates. However, the substrates are often treated in ways which minimize or neglect the inhomogeneities arising from the influence of inter-particle forces. Experiments are often run using gels or average stress measurements. This presentation discusses the effect of the local structure of the particulate environment on the root's direction. Using photoelastic particles and particles with a variety of Young's Moduli, we investigate the influence of inter-particle forces and particle stiffness on a pinto bean root's ability to grow through a fully-saturated granular medium. The level of particle contact force through which the roots successfully grow is determined and the influence of particle stiffness on root direction is investigated.

  12. Long-term control of root growth

    DOEpatents

    Burton, Frederick G.; Cataldo, Dominic A.; Cline, John F.; Skiens, W. Eugene

    1992-05-26

    A method and system for long-term control of root growth without killing the plants bearing those roots involves incorporating a 2,6-dinitroaniline in a polymer and disposing the polymer in an area in which root control is desired. This results in controlled release of the substituted aniline herbicide over a period of many years. Herbicides of this class have the property of preventing root elongation without translocating into other parts of the plant. The herbicide may be encapsulated in the polymer or mixed with it. The polymer-herbicide mixture may be formed into pellets, sheets, pipe gaskets, pipes for carrying water, or various other forms. The invention may be applied to other protection of buried hazardous wastes, protection of underground pipes, prevention of root intrusion beneath slabs, the dwarfing of trees or shrubs and other applications. The preferred herbicide is 4-difluoromethyl-N,N-dipropyl-2,6-dinitro-aniline, commonly known as trifluralin.

  13. Formation and separation of root border cells.

    PubMed

    Driouich, Azeddine; Durand, Caroline; Vicré-Gibouin, Maïté

    2007-01-01

    Plant roots release a large number of border cells into the rhizosphere, which are believed to play a key role in root development and health. The formation and loss of these cells from the root cap region is a developmentally regulated process that is also controlled by phytohormones and environmental factors. The separation of border cells involves the complete dissociation of individual cells from each other and from root tissue. This process requires the activity of cell wall-degrading enzymes that solubilize the cell wall connections between cells. We present and discuss the solubilization process with an emphasis on pectin-degrading enzymes as well as the recently discovered root border-like cells of Arabidopsis thaliana.

  14. Effect of lead on root growth

    PubMed Central

    Fahr, Mouna; Laplaze, Laurent; Bendaou, Najib; Hocher, Valerie; Mzibri, Mohamed El; Bogusz, Didier; Smouni, Abdelaziz

    2013-01-01

    Lead (Pb) is one of the most widespread heavy metal contaminant in soils. It is highly toxic to living organisms. Pb has no biological function but can cause morphological, physiological, and biochemical dysfunctions in plants. Plants have developed a wide range of tolerance mechanisms that are activated in response to Pb exposure. Pb affects plants primarily through their root systems. Plant roots rapidly respond either (i) by the synthesis and deposition of callose, creating a barrier that stops Pb entering (ii) through the uptake of large amounts of Pb and its sequestration in the vacuole accompanied by changes in root growth and branching pattern or (iii) by its translocation to the aboveground parts of plant in the case of hyperaccumulators plants. Here we review the interactions of roots with the presence of Pb in the rhizosphere and the effect of Pb on the physiological and biochemical mechanisms of root development. PMID:23750165

  15. Long-term control of root growth

    SciTech Connect

    Burton, F.G.; Cataldo, D.A.; Cline, J.F.; Skiens, W.E.

    1992-05-26

    A method and system for long-term control of root growth without killing the plants bearing those roots involves incorporating a 2,6-dinitroaniline in a polymer and disposing the polymer in an area in which root control is desired. This results in controlled release of the substituted aniline herbicide over a period of many years. Herbicides of this class have the property of preventing root elongation without translocating into other parts of the plant. The herbicide may be encapsulated in the polymer or mixed with it. The polymer-herbicide mixture may be formed into pellets, sheets, pipe gaskets, pipes for carrying water, or various other forms. The invention may be applied to other protection of buried hazardous wastes, protection of underground pipes, prevention of root intrusion beneath slabs, the dwarfing of trees or shrubs and other applications. The preferred herbicide is 4-difluoromethyl-N,N-dipropyl-2,6-dinitro-aniline, commonly known as trifluralin. 7 figs.

  16. Systems approaches to study root architecture dynamics

    PubMed Central

    Cuesta, Candela; Wabnik, Krzysztof; Benková, Eva

    2013-01-01

    The plant root system is essential for providing anchorage to the soil, supplying minerals and water, and synthesizing metabolites. It is a dynamic organ modulated by external cues such as environmental signals, water and nutrients availability, salinity and others. Lateral roots (LRs) are initiated from the primary root post-embryonically, after which they progress through discrete developmental stages which can be independently controlled, providing a high level of plasticity during root system formation. Within this review, main contributions are presented, from the classical forward genetic screens to the more recent high-throughput approaches, combined with computer model predictions, dissecting how LRs and thereby root system architecture is established and developed. PMID:24421783

  17. An overview of management of root fractures.

    PubMed

    Prithviraj, D R; Bhalla, H K; Vashisht, R; Regish, K M; Suresh, P

    2014-01-01

    Crown or root fractures are the most commonly encountered emergencies in the dental clinic. Root fractures occur in fewer than eight percent of the traumatic injuries to permanent teeth. They are broadly classified as horizontal and vertical root fractures. Correct diagnosis of root fractures is essential to ensure a proper treatment plan and hence, the best possible prognosis. Indication of the type of treatment to be used depends primarily on the level of the fracture line. Therefore, a clinician must also have a thorough knowledge of the various treatment approaches to devise a treatment plan accordingly. Various treatment strategies have been proposed, each with their own advantages and disadvantages. Hence, this literature review presents an overview of the various types of root fractures and their management.

  18. Clinical management of infected root canal dentin.

    PubMed

    Love, R M

    1996-08-01

    Several hundred different species of bacteria are present in the human intraoral environment. Bacterial penetration of root canal dentin occurs when bacteria invade the root canal system. These bacteria may constitute a reservoir from which root canal reinfection may occur during or after endodontic treatment. The learning objective of this article is to review endodontic microbiology, update readers on the role of bacteria in pulp and periapical disease, and discuss the principles of management of infected root canal dentin. Complete debridement, removal of microorganisms and affected dentin, and chemomechanical cleansing of the root canal are suggested as being the cornerstones of successful endodontic therapy, followed by intracanal medication to remove residual bacteria, when required. PMID:9242125

  19. Alfalfa Root Flavonoid Production Is Nitrogen Regulated.

    PubMed Central

    Coronado, C.; Zuanazzi, JAS.; Sallaud, C.; Quirion, J. C.; Esnault, R.; Husson, H. P.; Kondorosi, A.; Ratet, P.

    1995-01-01

    Flavonoids produced by legume roots are signal molecules acting both as chemoattractants and nod gene inducers for the symbiotic Rhizobium partner. Combined nitrogen inhibits the establishment of the symbiosis. To know whether nitrogen nutrition could act at the level of signal production, we have studied the expression of flavonoid biosynthetic genes as well as the production of flavonoids in the roots of plants grown under nitrogen-limiting or nonlimiting conditions. We show here that growth of the plant under nitrogen-limiting conditions results in the enhancement of expression of the flavonoid biosynthesis genes chalcone synthase and isoflavone reductase and in an increase of root flavonoid and isoflavonoid production as well as in the Rhizobium meliloti nod gene-inducing activity of the root extract. These results indicate that in alfalfa (Medicago sativa L.) roots, the production of flavonoids can be influenced by the nitrogen nutrition of the plant. PMID:12228491

  20. The origin and early evolution of roots.

    PubMed

    Kenrick, Paul; Strullu-Derrien, Christine

    2014-10-01

    Geological sites of exceptional fossil preservation are becoming a focus of research on root evolution because they retain edaphic and ecological context, and the remains of plant soft tissues are preserved in some. New information is emerging on the origins of rooting systems, their interactions with fungi, and their nature and diversity in the earliest forest ecosystems. Remarkably well-preserved fossils prove that mycorrhizal symbionts were diverse in simple rhizoid-based systems. Roots evolved in a piecemeal fashion and independently in several major clades through the Devonian Period (416 to 360 million years ago), rapidly extending functionality and complexity. Evidence from extinct arborescent clades indicates that polar auxin transport was recruited independently in several to regulate wood and root development. The broader impact of root evolution on the geochemical carbon cycle is a developing area and one in which the interests of the plant physiologist intersect with those of the geochemist.

  1. Effect of lead on root growth.

    PubMed

    Fahr, Mouna; Laplaze, Laurent; Bendaou, Najib; Hocher, Valerie; Mzibri, Mohamed El; Bogusz, Didier; Smouni, Abdelaziz

    2013-01-01

    Lead (Pb) is one of the most widespread heavy metal contaminant in soils. It is highly toxic to living organisms. Pb has no biological function but can cause morphological, physiological, and biochemical dysfunctions in plants. Plants have developed a wide range of tolerance mechanisms that are activated in response to Pb exposure. Pb affects plants primarily through their root systems. Plant roots rapidly respond either (i) by the synthesis and deposition of callose, creating a barrier that stops Pb entering (ii) through the uptake of large amounts of Pb and its sequestration in the vacuole accompanied by changes in root growth and branching pattern or (iii) by its translocation to the aboveground parts of plant in the case of hyperaccumulators plants. Here we review the interactions of roots with the presence of Pb in the rhizosphere and the effect of Pb on the physiological and biochemical mechanisms of root development.

  2. Management of Six Root Canals in Mandibular First Molar

    PubMed Central

    Gomes, Fabio de Almeida; Sousa, Bruno Carvalho

    2015-01-01

    Success in root canal treatment is achieved after thorough cleaning, shaping, and obturation of the root canal system. This clinical case describes conventional root canal treatment of an unusual mandibular first molar with six root canals. The prognosis for endodontic treatment in teeth with abnormal morphology is unfavorable if the clinician fails to recognize extra root canals. PMID:25685156

  3. Root Canal Treatment of a Maxillary Second Premolar with Two Palatal Root Canals: A Case Report

    PubMed Central

    Golmohammadi, Maryam; Jafarzadeh, Hamid

    2016-01-01

    Accurate diagnosis of the root canal morphology and anatomy is essential for thorough shaping and cleaning of the entire root canal system and consequent successful treatment. This report describes a case of maxillary second premolar with two roots and three root canals (two mesial and distal palatal canals). The case report underlines the importance of complete knowledge about root canal morphology and possible variations, coupled with clinical and radiographic examination in order to increase the ability of clinicians to treat difficult cases. PMID:27471538

  4. PHIV-RootCell: a supervised image analysis tool for rice root anatomical parameter quantification

    PubMed Central

    Lartaud, Marc; Perin, Christophe; Courtois, Brigitte; Thomas, Emilie; Henry, Sophia; Bettembourg, Mathilde; Divol, Fanchon; Lanau, Nadege; Artus, Florence; Bureau, Charlotte; Verdeil, Jean-Luc; Sarah, Gautier; Guiderdoni, Emmanuel; Dievart, Anne

    2015-01-01

    We developed the PHIV-RootCell software to quantify anatomical traits of rice roots transverse section images. Combined with an efficient root sample processing method for image acquisition, this program permits supervised measurements of areas (those of whole root section, stele, cortex, and central metaxylem vessels), number of cell layers and number of cells per cell layer. The PHIV-RootCell toolset runs under ImageJ, an independent operating system that has a license-free status. To demonstrate the usefulness of PHIV-RootCell, we conducted a genetic diversity study and an analysis of salt stress responses of root anatomical parameters in rice (Oryza sativa L.). Using 16 cultivars, we showed that we could discriminate between some of the varieties even at the 6 day-olds stage, and that tropical japonica varieties had larger root sections due to an increase in cell number. We observed, as described previously, that root sections become enlarged under salt stress. However, our results show an increase in cell number in ground tissues (endodermis and cortex) but a decrease in external (peripheral) tissues (sclerenchyma, exodermis, and epidermis). Thus, the PHIV-RootCell program is a user-friendly tool that will be helpful for future genetic and physiological studies that investigate root anatomical trait variations. PMID:25646121

  5. RootGraph: a graphic optimization tool for automated image analysis of plant roots.

    PubMed

    Cai, Jinhai; Zeng, Zhanghui; Connor, Jason N; Huang, Chun Yuan; Melino, Vanessa; Kumar, Pankaj; Miklavcic, Stanley J

    2015-11-01

    This paper outlines a numerical scheme for accurate, detailed, and high-throughput image analysis of plant roots. In contrast to existing root image analysis tools that focus on root system-average traits, a novel, fully automated and robust approach for the detailed characterization of root traits, based on a graph optimization process is presented. The scheme, firstly, distinguishes primary roots from lateral roots and, secondly, quantifies a broad spectrum of root traits for each identified primary and lateral root. Thirdly, it associates lateral roots and their properties with the specific primary root from which the laterals emerge. The performance of this approach was evaluated through comparisons with other automated and semi-automated software solutions as well as against results based on manual measurements. The comparisons and subsequent application of the algorithm to an array of experimental data demonstrate that this method outperforms existing methods in terms of accuracy, robustness, and the ability to process root images under high-throughput conditions.

  6. Root cap influences root colonisation by Pseudomonas fluorescens SBW25 on maize.

    PubMed

    Humphris, Sonia N; Bengough, A Glyn; Griffiths, Bryan S; Kilham, Ken; Rodger, Sheena; Stubbs, Vicky; Valentine, Tracy A; Young, Iain M

    2005-09-01

    We investigated the influence of root border cells on the colonisation of seedling Zea mays roots by Pseudomonas fluorescens SBW25 in sandy loam soil packed at two dry bulk densities. Numbers of colony forming units (CFU) were counted on sequential sections of root for intact and decapped inoculated roots grown in loose (1.0 mg m(-3)) and compacted (1.3 mg m(-3)) soil. After two days of root growth, the numbers of P. fluorescens (CFU cm(-1)) were highest on the section of root just below the seed with progressively fewer bacteria near the tip, irrespective of density. The decapped roots had significantly more colonies of P. fluorescens at the tip compared with the intact roots: approximately 100-fold more in the loose and 30-fold more in the compact soil. In addition, confocal images of the root tips grown in agar showed that P. fluorescens could only be detected on the tips of the decapped roots. These results indicated that border cells, and their associated mucilage, prevented complete colonization of the root tip by the biocontrol agent P. fluorescens, possibly by acting as a disposable surface or sheath around the cap.

  7. Resistance to compression of weakened roots subjected to different root reconstruction protocols

    PubMed Central

    ZOGHEIB, Lucas Villaça; SAAVEDRA, Guilherme de Siqueira Ferreira Anzaloni; CARDOSO, Paula Elaine; VALERA, Márcia Carneiro; de ARAÚJO, Maria Amélia Máximo

    2011-01-01

    Objective This study evaluated, in vitro, the fracture resistance of human non-vital teeth restored with different reconstruction protocols. Material and methods Forty human anterior roots of similar shape and dimensions were assigned to four groups (n=10), according to the root reconstruction protocol: Group I (control): non-weakened roots with glass fiber post; Group II: roots with composite resin by incremental technique and glass fiber post; Group III: roots with accessory glass fiber posts and glass fiber post; and Group IV: roots with anatomic glass fiber post technique. Following post cementation and core reconstruction, the roots were embedded in chemically activated acrylic resin and submitted to fracture resistance testing, with a compressive load at an angle of 45º in relation to the long axis of the root at a speed of 0.5 mm/min until fracture. All data were statistically analyzed with bilateral Dunnett's test (α=0.05). Results Group I presented higher mean values of fracture resistance when compared with the three experimental groups, which, in turn, presented similar resistance to fracture among each other. None of the techniques of root reconstruction with intraradicular posts improved root strength, and the incremental technique was suggested as being the most recommendable, since the type of fracture that occurred allowed the remaining dental structure to be repaired. Conclusion The results of this in vitro study suggest that the healthy remaining radicular dentin is more important to increase fracture resistance than the root reconstruction protocol. PMID:22231002

  8. Root cap influences root colonisation by Pseudomonas fluorescens SBW25 on maize.

    PubMed

    Humphris, Sonia N; Bengough, A Glyn; Griffiths, Bryan S; Kilham, Ken; Rodger, Sheena; Stubbs, Vicky; Valentine, Tracy A; Young, Iain M

    2005-09-01

    We investigated the influence of root border cells on the colonisation of seedling Zea mays roots by Pseudomonas fluorescens SBW25 in sandy loam soil packed at two dry bulk densities. Numbers of colony forming units (CFU) were counted on sequential sections of root for intact and decapped inoculated roots grown in loose (1.0 mg m(-3)) and compacted (1.3 mg m(-3)) soil. After two days of root growth, the numbers of P. fluorescens (CFU cm(-1)) were highest on the section of root just below the seed with progressively fewer bacteria near the tip, irrespective of density. The decapped roots had significantly more colonies of P. fluorescens at the tip compared with the intact roots: approximately 100-fold more in the loose and 30-fold more in the compact soil. In addition, confocal images of the root tips grown in agar showed that P. fluorescens could only be detected on the tips of the decapped roots. These results indicated that border cells, and their associated mucilage, prevented complete colonization of the root tip by the biocontrol agent P. fluorescens, possibly by acting as a disposable surface or sheath around the cap. PMID:16329978

  9. RootGraph: a graphic optimization tool for automated image analysis of plant roots

    PubMed Central

    Cai, Jinhai; Zeng, Zhanghui; Connor, Jason N.; Huang, Chun Yuan; Melino, Vanessa; Kumar, Pankaj; Miklavcic, Stanley J.

    2015-01-01

    This paper outlines a numerical scheme for accurate, detailed, and high-throughput image analysis of plant roots. In contrast to existing root image analysis tools that focus on root system-average traits, a novel, fully automated and robust approach for the detailed characterization of root traits, based on a graph optimization process is presented. The scheme, firstly, distinguishes primary roots from lateral roots and, secondly, quantifies a broad spectrum of root traits for each identified primary and lateral root. Thirdly, it associates lateral roots and their properties with the specific primary root from which the laterals emerge. The performance of this approach was evaluated through comparisons with other automated and semi-automated software solutions as well as against results based on manual measurements. The comparisons and subsequent application of the algorithm to an array of experimental data demonstrate that this method outperforms existing methods in terms of accuracy, robustness, and the ability to process root images under high-throughput conditions. PMID:26224880

  10. GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems

    PubMed Central

    Rellán-Álvarez, Rubén; Lobet, Guillaume; Lindner, Heike; Pradier, Pierre-Luc; Sebastian, Jose; Yee, Muh-Ching; Geng, Yu; Trontin, Charlotte; LaRue, Therese; Schrager-Lavelle, Amanda; Haney, Cara H; Nieu, Rita; Maloof, Julin; Vogel, John P; Dinneny, José R

    2015-01-01

    Root systems develop different root types that individually sense cues from their local environment and integrate this information with systemic signals. This complex multi-dimensional amalgam of inputs enables continuous adjustment of root growth rates, direction, and metabolic activity that define a dynamic physical network. Current methods for analyzing root biology balance physiological relevance with imaging capability. To bridge this divide, we developed an integrated-imaging system called Growth and Luminescence Observatory for Roots (GLO-Roots) that uses luminescence-based reporters to enable studies of root architecture and gene expression patterns in soil-grown, light-shielded roots. We have developed image analysis algorithms that allow the spatial integration of soil properties, gene expression, and root system architecture traits. We propose GLO-Roots as a system that has great utility in presenting environmental stimuli to roots in ways that evoke natural adaptive responses and in providing tools for studying the multi-dimensional nature of such processes. DOI: http://dx.doi.org/10.7554/eLife.07597.001 PMID:26287479

  11. Accessory roots and root canals in human anterior teeth: a review and clinical considerations.

    PubMed

    Ahmed, H M A; Hashem, A A

    2016-08-01

    Anterior teeth may have aberrant anatomical variations in the number of roots and root canals. A review of the literature was conducted using appropriate key words in major endodontic journals to identify the available reported cases as well as experimental and clinical investigations on accessory roots and root canals in anterior teeth. After retrieving the full text of related articles, cross-citations were identified, and the pooled data were then discussed. Results revealed a higher prevalence in accessory root/root canal variations in mandibular anterior teeth than in maxillary counterparts. However, maxillary incisor teeth revealed the highest tendency for accessory root/root canal aberrations caused by anomalies such as dens invaginatus and palato-gingival groove. Primary anterior teeth may also exhibit external and internal anatomical variations in the root, especially maxillary canines. Therefore, dental practitioners should thoroughly assess all teeth scheduled for root canal treatment to prevent the undesirable consequences caused by inadequate debridement of accessory configurations of the root canal system. PMID:26174943

  12. GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems.

    PubMed

    Rellán-Álvarez, Rubén; Lobet, Guillaume; Lindner, Heike; Pradier, Pierre-Luc; Sebastian, Jose; Yee, Muh-Ching; Geng, Yu; Trontin, Charlotte; LaRue, Therese; Schrager-Lavelle, Amanda; Haney, Cara H; Nieu, Rita; Maloof, Julin; Vogel, John P; Dinneny, José R

    2015-01-01

    Root systems develop different root types that individually sense cues from their local environment and integrate this information with systemic signals. This complex multi-dimensional amalgam of inputs enables continuous adjustment of root growth rates, direction, and metabolic activity that define a dynamic physical network. Current methods for analyzing root biology balance physiological relevance with imaging capability. To bridge this divide, we developed an integrated-imaging system called Growth and Luminescence Observatory for Roots (GLO-Roots) that uses luminescence-based reporters to enable studies of root architecture and gene expression patterns in soil-grown, light-shielded roots. We have developed image analysis algorithms that allow the spatial integration of soil properties, gene expression, and root system architecture traits. We propose GLO-Roots as a system that has great utility in presenting environmental stimuli to roots in ways that evoke natural adaptive responses and in providing tools for studying the multi-dimensional nature of such processes. PMID:26287479

  13. Root phenology at Harvard Forest and beyond

    NASA Astrophysics Data System (ADS)

    Abramoff, R. Z.; Finzi, A.

    2013-12-01

    Roots are hidden from view and heterogeneously distributed making them difficult to study in situ. As a result, the causes and timing of root production are not well understood. Researchers have long assumed that above and belowground phenology is synchronous; for example, most parameterizations of belowground carbon allocation in terrestrial biosphere models are based on allometry and represent a fixed fraction of net C uptake. However, using results from metaanalysis as well as empirical data from oak and hemlock stands at Harvard Forest, we show that synchronous root and shoot growth is the exception rather than the rule. We collected root and shoot phenology measurements from studies across four biomes (boreal, temperate, Mediterranean, and subtropical). General patterns of root phenology varied widely with 1-5 production peaks in a growing season. Surprisingly, in 9 out of the 15 studies, the first root production peak was not the largest peak. In the majority of cases maximum shoot production occurred before root production (Offset>0 in 32 out of 47 plant sample means). The number of days offset between maximum root and shoot growth was negatively correlated with median annual temperature and therefore differs significantly across biomes (ANOVA, F3,43=9.47, p<0.0001). This decline in offset with increasing temperature may reflect greater year-round coupling between air and soil temperature in warm biomes. Growth form (woody or herbaceous) also influenced the relative timing of root and shoot growth. Woody plants had a larger range of days between root and shoot growth peaks as well as a greater number of growth peaks. To explore the range of phenological relationships within woody plants in the temperate biome, we focused on above and belowground phenology in two common northeastern tree species, Quercus rubra and Tsuga canadensis. Greenness index, rate of stem growth, root production and nonstructural carbohydrate content were measured beginning in April

  14. Variation of the Linkage of Root Function with Root Branch Order

    PubMed Central

    Chen, Zhengxia; Zeng, Hui

    2013-01-01

    Mounting evidence has shown strong linkage of root function with root branch order. However, it is not known whether this linkage is consistent in different species. Here, root anatomic traits of the first five branch order were examined in five species differing in plant phylogeny and growth form in tropical and subtropical forests of south China. In Paramichelia baillonii, one tree species in Magnoliaceae, the intact cortex as well as mycorrhizal colonization existed even in the fifth-order root suggesting the preservation of absorption function in the higher-order roots. In contrast, dramatic decreases of cortex thickness and mycorrhizal colonization were observed from lower- to higher-order roots in three other tree species, Cunninghamia lanceolata, Acacia auriculiformis and Gordonia axillaries, which indicate the loss of absorption function. In a fern, Dicranopteris dichotoma, there were several cortex layers with prominently thickened cell wall and no mycorrhizal colonization in the third- and fourth-order roots, also demonstrating the loss of absorptive function in higher-order roots. Cluster analysis using these anatomic traits showed a different classification of root branch order in P. baillonii from other four species. As for the conduit diameter-density relationship in higher-order roots, the mechanism underpinning this relationship in P. baillonii was different from that in other species. In lower-order roots, different patterns of coefficient of variance for conduit diameter and density provided further evidence for the two types of linkage of root function with root branch order. These linkages corresponding to two types of ephemeral root modules have important implication in the prediction of terrestrial carbon cycling, although we caution that this study was pseudo-replicated. Future studies by sampling more species can test the generality of these two types of linkage. PMID:23451168

  15. Do ectomycorrhizal and arbuscular mycorrhizal temperate tree species systematically differ in root order-related fine root morphology and biomass?

    PubMed Central

    Kubisch, Petra; Hertel, Dietrich; Leuschner, Christoph

    2015-01-01

    While most temperate broad-leaved tree species form ectomycorrhizal (EM) symbioses, a few species have arbuscular mycorrhizas (AM). It is not known whether EM and AM tree species differ systematically with respect to fine root morphology, fine root system size and root functioning. In a species-rich temperate mixed forest, we studied the fine root morphology and biomass of three EM and three AM tree species from the genera Acer, Carpinus, Fagus, Fraxinus, and Tilia searching for principal differences between EM and AM trees. We further assessed the evidence of convergence or divergence in root traits among the six co-occurring species. Eight fine root morphological and chemical traits were investigated in root segments of the first to fourth root order in three different soil depths and the relative importance of the factors root order, tree species and soil depth for root morphology was determined. Root order was more influential than tree species while soil depth had only a small effect on root morphology All six species showed similar decreases in specific root length and specific root area from the 1st to the 4th root order, while the species patterns differed considerably in root tissue density, root N concentration, and particularly with respect to root tip abundance. Most root morphological traits were not significantly different between EM and AM species (except for specific root area that was larger in AM species), indicating that mycorrhiza type is not a key factor influencing fine root morphology in these species. The order-based root analysis detected species differences more clearly than the simple analysis of bulked fine root mass. Despite convergence in important root traits among AM and EM species, even congeneric species may differ in certain fine root morphological traits. This suggests that, in general, species identity has a larger influence on fine root morphology than mycorrhiza type. PMID:25717334

  16. How to bond to root canal dentin

    NASA Astrophysics Data System (ADS)

    Nica, Luminita; Todea, Carmen; Furtos, Gabriel; Baldea, Bogdan

    2014-01-01

    Bonding to root canal dentin may be difficult due to various factors: the structural characteristic of the root canal dentin, which is different from that of the coronal dentin; the presence of the organic tissue of the dental pulp inside the root canal, which has to be removed during the cleaning-shaping of the root canal system; the smear-layer resulted after mechanical instrumentation, which may interfere with the adhesion of the filling materials; the type of the irrigants used in the cleaning protocol; the type of the sealer and core material used in the obturation of the endodontic space; the type of the materials used for the restoration of the endodontically treated teeth. The influence of the cleaning protocol, of the root canal filling material, of the type of the adhesive system used in the restoration of the treated teeth and of the region of the root canal, on the adhesion of several filling and restorative materials to root canal dentin was evaluated in the push-out bond strength test on 1-mm thick slices of endodontically treated human teeth. The results showed that all these factors have a statistically significant influence on the push-out bond strength. Formation of resin tags between radicular dentin and the investigated materials was observed in some of the samples at SEM analysis.

  17. Spiralizations and tropisms in Arabidopsis roots.

    PubMed

    Migliaccio, F; Piconese, S

    2001-12-01

    When Arabidopsis seedlings are grown on a hard-agar plate, their primary roots show characteristic spiralling movements, apparent as waves, coils and torsions, together with a slanting toward the right-hand side. All these movements are believed to be the result of three different processes acting on the roots: circumnutation, positive gravitropism and negative thigmotropism. The basic movement of the roots is described as that of a growing right-handed helix, which, because of the root tip hitting the agar plate, is continuously switched from the right-hand to the left-hand of the growth direction, and vice versa. This movement also produces a slanting root-growth direction toward the right-hand because of the incomplete waves made by the right-handed root to the left-hand. By contrast, the torsions seen in the coils and waves are interpreted as artefacts that form as an adaptation of the three-dimensional root helix to the flat two-dimensional agar surface.

  18. A thermodynamic formulation of root water uptake

    NASA Astrophysics Data System (ADS)

    Hildebrandt, Anke; Kleidon, Axel; Bechmann, Marcel

    2016-08-01

    By extracting bound water from the soil and lifting it to the canopy, root systems of vegetation perform work. Here we describe how root water uptake can be evaluated thermodynamically and demonstrate that this evaluation provides additional insights into the factors that impede root water uptake. We derive an expression that relates the energy export at the base of the root system to a sum of terms that reflect all fluxes and storage changes along the flow path in thermodynamic terms. We illustrate this thermodynamic formulation using an idealized setup of scenarios with a simple model. In these scenarios, we demonstrate why heterogeneity in soil water distribution and rooting properties affect the impediment of water flow even though the mean soil water content and rooting properties are the same across the scenarios. The effects of heterogeneity can clearly be identified in the thermodynamics of the system in terms of differences in dissipative losses and hydraulic energy, resulting in an earlier start of water limitation in the drying cycle. We conclude that this thermodynamic evaluation of root water uptake conveniently provides insights into the impediments of different processes along the entire flow path, which goes beyond resistances and also accounts for the role of heterogeneity in soil water distribution.

  19. Bitter Root Irrigation district canal, looking east, typical section (canal ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Bitter Root Irrigation district canal, looking east, typical section (canal full) - Bitter Root Irrigation Project, Bitter Root Irrigation Canal, Heading at Rock Creek Diversion Dam, West of U.S. Highway 93, Darby, Ravalli County, MT

  20. Bitter Root Irrigation district canal, looking east, typical section and ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Bitter Root Irrigation district canal, looking east, typical section and crossing - Bitter Root Irrigation Project, Bitter Root Irrigation Canal, Heading at Rock Creek Diversion Dam, West of U.S. Highway 93, Darby, Ravalli County, MT

  1. 10. PHOTOCOPY OF 'P. H. & F. M. ROOTS FOUNDARY ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    10. PHOTOCOPY OF 'P. H. & F. M. ROOTS FOUNDARY MANUFACTURERS OF ROOTS BLOWERS' FROM INDIANAPOLIS STAR, June 13, 1926, Gravure Section, p. 2 - P. H. & F. M. Roots Company, Eastern Avenue, Connersville, Fayette County, IN

  2. A thermodynamic formulation of root water uptake

    NASA Astrophysics Data System (ADS)

    Hildebrandt, A.; Kleidon, A.; Bechmann, M.

    2015-12-01

    By extracting bound water from the soil and lifting it to the canopy, root systems of vegetation perform work. Here we describe how the energetics involved in root water uptake can be quantified. The illustration is done using a simple, four-box model of the soil-root system to represent heterogeneity and a parameterization in which root water uptake is driven by the xylem potential of the plant with a fixed flux boundary condition. We use this approach to evaluate the effects of soil moisture heterogeneity and root system properties on the dissipative losses and export of energy involved in root water uptake. For this, we derive an expression that relates the energy export at the root collar to a sum of terms that reflect all fluxes and storage changes along the flow path in thermodynamic terms. We conclude that such a thermodynamic evaluation of root water uptake conveniently provides insights into the impediments of different processes along the entire flow path and explicitly accounting not only for the resistances along the flow path and those imposed by soil drying but especially the role of heterogenous soil water distribution. The results show that least energy needs to be exported and dissipative losses are minimized by a root system if it extracts water uniformly from the soil. This has implications for plant water relations in forests where canopies generate heterogenous input patterns. Our diagnostic in the energy domain should be useful in future model applications for quantifying how plants can evolve towards greater efficiency in their structure and function, particularly in heterogenous soil environments. Generally, this approach may help to better describe heterogeneous processes in the soil in a simple, yet physically-based way.

  3. Root type matters: measurements of water uptake by seminal, crown and lateral roots of maize

    NASA Astrophysics Data System (ADS)

    Ahmed, Mutez Ali; Zarebanadkouki, Mohsen; Kaestner, Anders; Carminati, Andrea

    2016-04-01

    Roots play a key role in water acquisition and are a significant component of plant adaptation to different environmental conditions. Although maize (Zea mays L.) is one of the most important crops worldwide, there is limited information on the function of different root segments and types in extracting water from soils. Aim of this study was to investigate the location of root water uptake in mature maize. We used neutron radiography to image the spatial distribution of maize roots and trace the transport of injected deuterated water (D2O) in soil and roots. Maize plants were grown in aluminum containers filled with a sandy soil that was kept homogeneously wet throughout the experiment. When the plants were five weeks-old, we injected D2O into selected soil regions. The transport of D2O was simulated using a diffusion-convection numerical model. By fitting the observed D2O transport we quantified the diffusion coefficient and the water uptake of the different root segments. The model was initially developed and tested with two weeks-old maize (Ahmed et. al. 2015), for which we found that water was mainly taken up by lateral roots and the water uptake of the seminal roots was negligible. Here, we used this method to measure root water uptake in a mature maize root system. The root architecture of five weeks-old maize consisted of primary and seminal roots with long laterals and crown (nodal) roots that emerged from the above ground part of the plant two weeks after planting. The crown roots were thicker than the seminal roots and had fewer and shorter laterals. Surprisingly, we found that the water was mainly taken up by the crown roots and their laterals, while the lateral roots of seminal roots, which were the main location of water uptake of younger plants, stopped to take up water. Interestingly, we also found that in contrast to the seminal roots, the crown roots were able to take up water also from their distal segments. We conclude that for the two weeks

  4. Adventitious root induction in Arabidopsis thaliana as a model for in vitro root organogenesis.

    PubMed

    Verstraeten, Inge; Beeckman, Tom; Geelen, Danny

    2013-01-01

    Adventitious root formation, the development of roots on non-root tissue (e.g. leaves, hypocotyls and stems) is a critical step during micropropagation. Although root induction treatments are routinely used for a large number of species micropropagated in vitro as well as for in vivo cuttings, the mechanisms controlling adventitious rooting are still poorly understood. Researchers attempt to gain better insight into the molecular aspects by studying adventitious rooting in Arabidopsis thaliana. The existing assay involves etiolation of seedlings and measurements of de novo formed roots on the elongated hypocotyl. The etiolated hypocotyls express a novel auxin-controlled signal transduction pathway in which auxin response factors (ARFs), microRNAs and environmental conditions that drive adventitious rooting are integrated. An alternative assay makes use of so-called thin cell layers (TCL), excised strips of cells from the inflorescence stem of Arabidopsis thaliana. However, both the etiolated seedling system and the TCL assay are only distantly related to industrial rooting processes in which roots are induced on adult stem tissue. Here, we describe an adventitious root induction system that uses segments of the inflorescence stems of Arabidopsis thaliana, which have a histological structure similar to cuttings or in vitro micropropagated shoots. The system allows multiple treatments with chemicals as well as the evaluation of different environmental conditions on a large number of explants. It is therefore suitable for high throughput chemical screenings and experiments that require numerous data points for statistical analysis. Using this assay, the adventitious root induction capacity of classical auxins was evaluated and a differential response to the different auxins could be demonstrated. NAA, IBA and IAA stimulated adventitious rooting on the stem segment, whereas 2,4-D and picloram did not. Light conditions profoundly influenced the root induction capacity

  5. Pullout tests of root analogs and natural root bundles in soil: Experiments and modeling

    NASA Astrophysics Data System (ADS)

    Schwarz, M.; Cohen, D.; Or, D.

    2011-06-01

    Root-soil mechanical interactions are key to soil stability on steep hillslopes. Motivated by new advances and applications of the Root Bundle Model (RBM), we conducted a series of experiments in the laboratory and in the field to study the mechanical response of pulled roots. We systematically quantified the influence of different factors such as root geometry and configuration, soil type, and soil water content considering individual roots and root bundles. We developed a novel pullout apparatus for strain-controlled field and laboratory tests of up to 13 parallel roots measured individually and as a bundle. Results highlight the importance of root tortuosity and root branching points for prediction of individual root pullout behavior. Results also confirm the critical role of root diameter distribution for realistic prediction of global pullout behavior of a root bundle. Friction between root and soil matrix varied with soil type and water content and affected the force-displacement behavior. Friction in sand varied from 1 to 17 kPa, with low values obtained in wet sand at a confining pressure of 2 kPa and high values obtained in dry sand with 4.5 kPa confining pressure. In a silty soil matrix, friction ranged between 3 kPa under wet and low confining pressure (2 kPa) and 6 kPa in dry and higher confining pressure (4.5 kPa). Displacement at maximum pullout force increased with increasing root diameter and with tortuosity. Laboratory experiments were used to calibrate the RBM that was later validated using six field measurements with natural root bundles of Norway spruce (Picea abies L.). These tests demonstrate the progressive nature of root bundle failure under strain-controlled pullout force and provide new insights regarding force-displacement behavior of root reinforcement, highlighting the importance of considering displacement in slope stability models. Results show that the magnitude of maximum root pullout forces (1-5 kPa) are important for slope

  6. BOREAS TE-2 Root Respiration Data

    NASA Technical Reports Server (NTRS)

    Ryan, Michael G.; Lavigne, Michael; Hall, Forrest G. (Editor); Papagno, Andrea (Editor)

    2000-01-01

    The BOREAS TE-2 team collected several data sets in support of its efforts to characterize and interpret information on the respiration of the foliage, roots, and wood of boreal vegetation. This data set includes means of tree root respiration measurements on roots having diameters ranging from 0 to 2 mm conducted in the NSA during the growing season of 1994. The data are stored in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  7. THttpServer class in ROOT

    NASA Astrophysics Data System (ADS)

    Adamczewski-Musch, Joern; Linev, Sergey

    2015-12-01

    The new THttpServer class in ROOT implements HTTP server for arbitrary ROOT applications. It is based on Civetweb embeddable HTTP server and provides direct access to all objects registered for the server. Objects data could be provided in different formats: binary, XML, GIF/PNG, and JSON. A generic user interface for THttpServer has been implemented with HTML/JavaScript based on JavaScript ROOT development. With any modern web browser one could list, display, and monitor objects available on the server. THttpServer is used in Go4 framework to provide HTTP interface to the online analysis.

  8. Clinical technique for invasive cervical root resorption

    PubMed Central

    Silveira, Luiz Fernando Machado; Silveira, Carina Folgearini; Martos, Josué; Piovesan, Edno Moacir; César Neto, João Batista

    2011-01-01

    This clinical case report describes the diagnosis and treatment of an external invasive cervical resorption. A 17-year-old female patient had a confirmed diagnosis of invasive cervical resorption class 4 by cone beam computerized tomography. Although, there was no communication with the root canal, the invasive resorption process was extending into the cervical and middle third of the root. The treatment of the cervical resorption of the lateral incisor interrupted the resorptive process and restored the damaged root surface and the dental functions without any esthetic sequelae. Both the radiographic examination and computed tomography are imperative to reveal the extent of the defect in the differential diagnosis. PMID:22144822

  9. Getting to the roots of it: Genetic and hormonal control of root architecture

    PubMed Central

    Jung, Janelle K. H.; McCouch, Susan

    2013-01-01

    Root system architecture (RSA) – the spatial configuration of a root system – is an important developmental and agronomic trait, with implications for overall plant architecture, growth rate and yield, abiotic stress resistance, nutrient uptake, and developmental plasticity in response to environmental changes. Root architecture is modulated by intrinsic, hormone-mediated pathways, intersecting with pathways that perceive and respond to external, environmental signals. The recent development of several non-invasive 2D and 3D root imaging systems has enhanced our ability to accurately observe and quantify architectural traits on complex whole-root systems. Coupled with the powerful marker-based genotyping and sequencing platforms currently available, these root phenotyping technologies lend themselves to large-scale genome-wide association studies, and can speed the identification and characterization of the genes and pathways involved in root system development. This capability provides the foundation for examining the contribution of root architectural traits to the performance of crop varieties in diverse environments. This review focuses on our current understanding of the genes and pathways involved in determining RSA in response to both intrinsic and extrinsic (environmental) response pathways, and provides a brief overview of the latest root system phenotyping technologies and their potential impact on elucidating the genetic control of root development in plants. PMID:23785372

  10. Root hair-specific EXPANSIN B genes have been selected for Graminaceae root hairs.

    PubMed

    Won, Su-Kyung; Choi, Sang-Bong; Kumari, Simple; Cho, Misuk; Lee, Sang Ho; Cho, Hyung-Taeg

    2010-10-01

    Cell differentiation ultimately relies on the regulation of cell type-specific genes. For a root hair cell to undergo morphogenesis, diverse cellular processes including cell-wall loosening must occur in a root hair cell-specific manner. Previously, we identified and characterized root hairspecific cis-elements (RHE) from the genes encoding the cell wall-loosening protein EXPANSIN A (EXPA) which functions preferentially on dicot cell walls. This study reports two root hair-specific grass EXPB genes that contain RHEs. These genes are thought to encode proteins that function more efficiently on grass cell walls. The proximal promoter regions of two orthologous EXPB genes from rice (Oryza sativa; OsEXPB5) and barley (Hordeum vulgare; HvEXPB1) included RHE motifs. These promoters could direct root hair-specific expression of green fluorescent protein (GFP) in the roots of rice and Arabidopsis (Arabidopsis thaliana). Promoter deletion analyses demonstrated that the RHE motifs are necessary for root hairspecific expression of these EXPB promoters. Phylogenetic analysis of EXP protein sequences indicated that grass EXPBs are the only orthologs to these root hair-specific EXPBs, separating dicot EXPBs to distal branches of the tree. These results suggest that RHE-containing root hair-specific EXPB genes have evolved for grass-specific cell wall modification during root hair morphogenesis.

  11. Arthroscopic Repair of Posterior Meniscal Root Tears

    PubMed Central

    Matheny, Lauren; Moulton, Samuel G.; Dean, Chase S.; LaPrade, Robert F.

    2016-01-01

    Objectives: The purpose of this study was to compare subjective clinical outcomes in patients requiring arthroscopic transtibial pullout repair for posterior meniscus root tears of the medial and lateral menisci. We hypothesized that improvement in function and activity level would be similar among patients undergoing lateral and medial meniscal root repairs. Methods: This study was IRB approved. All patients who underwent posterior meniscal root repair by a single orthopaedic surgeon were included in this study. Detailed operative data were documented at surgery. Patients completed a subjective questionnaire, including Lysholm score, Tegner activity scale, WOMAC, SF-12 and patient satisfaction with outcome, which were collected preoperatively and at a minimum of two years postoperatively. Failure was defined as any patient who underwent revision meniscal root repair or partial meniscectomy following the index surgery. Results: There were 50 patients (16 females, 34 males) with a mean age of 37.8 years (range, 16.6-65.7) and a mean BMI of 27.3 (range, 20.5-49.2) included in this study. Fifteen patients underwent lateral meniscus root repair and 35 patients underwent medial meniscus root repair. Three patients who underwent lateral meniscus root repair required revision meniscus root repair surgery, while no patients who underwent medial meniscus root repair required revision surgery (p=0.26). There was a significant difference in preoperative and postoperative Lysholm score (53 vs. 78) (p<0.001), Tegner activity scale (2.0 vs. 4.0) (p=0.03), SF-12 physical component subscale (38 vs. 50) (p=0.001) and WOMAC (36 vs. 8) (p<0.001) for the total population. Median patient satisfaction with outcome was 9 (range, 1-10). There was no significant difference in mean age between lateral and medial root repair groups (32 vs. 40) (p=0.12) or gender (p=0.19). There was no significant difference in gender between lateral and medial root repair groups (p=0.95). There was a

  12. Plant roots use a patterning mechanism to position lateral root branches toward available water.

    PubMed

    Bao, Yun; Aggarwal, Pooja; Robbins, Neil E; Sturrock, Craig J; Thompson, Mark C; Tan, Han Qi; Tham, Cliff; Duan, Lina; Rodriguez, Pedro L; Vernoux, Teva; Mooney, Sacha J; Bennett, Malcolm J; Dinneny, José R

    2014-06-24

    The architecture of the branched root system of plants is a major determinant of vigor. Water availability is known to impact root physiology and growth; however, the spatial scale at which this stimulus influences root architecture is poorly understood. Here we reveal that differences in the availability of water across the circumferential axis of the root create spatial cues that determine the position of lateral root branches. We show that roots of several plant species can distinguish between a wet surface and air environments and that this also impacts the patterning of root hairs, anthocyanins, and aerenchyma in a phenomenon we describe as hydropatterning. This environmental response is distinct from a touch response and requires available water to induce lateral roots along a contacted surface. X-ray microscale computed tomography and 3D reconstruction of soil-grown root systems demonstrate that such responses also occur under physiologically relevant conditions. Using early-stage lateral root markers, we show that hydropatterning acts before the initiation stage and likely determines the circumferential position at which lateral root founder cells are specified. Hydropatterning is independent of endogenous abscisic acid signaling, distinguishing it from a classic water-stress response. Higher water availability induces the biosynthesis and transport of the lateral root-inductive signal auxin through local regulation of tryptophan aminotransferase of Arabidopsis 1 and PIN-formed 3, both of which are necessary for normal hydropatterning. Our work suggests that water availability is sensed and interpreted at the suborgan level and locally patterns a wide variety of developmental processes in the root.

  13. Plant roots use a patterning mechanism to position lateral root branches toward available water

    PubMed Central

    Bao, Yun; Aggarwal, Pooja; Robbins, Neil E.; Sturrock, Craig J.; Thompson, Mark C.; Tan, Han Qi; Tham, Cliff; Duan, Lina; Rodriguez, Pedro L.; Vernoux, Teva; Mooney, Sacha J.; Bennett, Malcolm J.; Dinneny, José R.

    2014-01-01

    The architecture of the branched root system of plants is a major determinant of vigor. Water availability is known to impact root physiology and growth; however, the spatial scale at which this stimulus influences root architecture is poorly understood. Here we reveal that differences in the availability of water across the circumferential axis of the root create spatial cues that determine the position of lateral root branches. We show that roots of several plant species can distinguish between a wet surface and air environments and that this also impacts the patterning of root hairs, anthocyanins, and aerenchyma in a phenomenon we describe as hydropatterning. This environmental response is distinct from a touch response and requires available water to induce lateral roots along a contacted surface. X-ray microscale computed tomography and 3D reconstruction of soil-grown root systems demonstrate that such responses also occur under physiologically relevant conditions. Using early-stage lateral root markers, we show that hydropatterning acts before the initiation stage and likely determines the circumferential position at which lateral root founder cells are specified. Hydropatterning is independent of endogenous abscisic acid signaling, distinguishing it from a classic water-stress response. Higher water availability induces the biosynthesis and transport of the lateral root-inductive signal auxin through local regulation of TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 and PIN-FORMED 3, both of which are necessary for normal hydropatterning. Our work suggests that water availability is sensed and interpreted at the suborgan level and locally patterns a wide variety of developmental processes in the root. PMID:24927545

  14. Plant roots use a patterning mechanism to position lateral root branches toward available water.

    PubMed

    Bao, Yun; Aggarwal, Pooja; Robbins, Neil E; Sturrock, Craig J; Thompson, Mark C; Tan, Han Qi; Tham, Cliff; Duan, Lina; Rodriguez, Pedro L; Vernoux, Teva; Mooney, Sacha J; Bennett, Malcolm J; Dinneny, José R

    2014-06-24

    The architecture of the branched root system of plants is a major determinant of vigor. Water availability is known to impact root physiology and growth; however, the spatial scale at which this stimulus influences root architecture is poorly understood. Here we reveal that differences in the availability of water across the circumferential axis of the root create spatial cues that determine the position of lateral root branches. We show that roots of several plant species can distinguish between a wet surface and air environments and that this also impacts the patterning of root hairs, anthocyanins, and aerenchyma in a phenomenon we describe as hydropatterning. This environmental response is distinct from a touch response and requires available water to induce lateral roots along a contacted surface. X-ray microscale computed tomography and 3D reconstruction of soil-grown root systems demonstrate that such responses also occur under physiologically relevant conditions. Using early-stage lateral root markers, we show that hydropatterning acts before the initiation stage and likely determines the circumferential position at which lateral root founder cells are specified. Hydropatterning is independent of endogenous abscisic acid signaling, distinguishing it from a classic water-stress response. Higher water availability induces the biosynthesis and transport of the lateral root-inductive signal auxin through local regulation of tryptophan aminotransferase of Arabidopsis 1 and PIN-formed 3, both of which are necessary for normal hydropatterning. Our work suggests that water availability is sensed and interpreted at the suborgan level and locally patterns a wide variety of developmental processes in the root. PMID:24927545

  15. Allometry of root branching and its relationship to root morphological and functional traits in three range grasses

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Several studies have documented the existence of correlative mechanisms that control lateral root emergence in plants. To better understand root branching responses to nutrients, root growth in three range grasses [Whitmar cultivar of bluebunch wheatgrass (Pseudoroegneria spicata (Pursh) Love), Hyc...

  16. Rooting depths of plants relative to biological and environmental factors

    SciTech Connect

    Foxx, T S; Tierney, G D; Williams, J M

    1984-11-01

    In 1981 to 1982 an extensive bibliographic study was completed to document rooting depths of native plants in the United States. The data base presently contains 1034 citations with approximately 12,000 data elements. In this paper the data were analyzed for rooting depths as related to life form, soil type, geographical region, root type, family, root depth to shoot height ratios, and root depth to root lateral ratios. Average rooting depth and rooting frequencies were determined and related to present low-level waste site maintenance.

  17. Understanding plant root system influences on soil strength and stability

    NASA Astrophysics Data System (ADS)

    Bengough, A. Glyn; Brown, Jennifer L.; Loades, Kenneth W.; Knappett, Jonathan A.; Meijer, Gertjan; Nicoll, Bruce

    2016-04-01

    Keywords: root growth, soil reinforcement, tensile strength Plant roots modify and reinforce the soil matrix, stabilising it against erosion and shallow landslides. Roots mechanically bind the soil particles together and modify the soil hydrology via water uptake, creation of biopores, and modification of the soil water-release characteristic. Key to understanding the mechanical reinforcement of soil by roots is the relation between root strength and root diameter measured for roots in any given soil horizon. Thin roots have frequently been measured to have a greater tensile strength than thick roots, but their strength is also often much more variable. We consider the factors influencing this strength-diameter relationship, considering relations between root tensile strength and root dry density, root water content, root age, and root turnover in several woody and non-woody species. The role of possible experimental artefacts and measurement techniques will be considered. Tensile strength increased generally with root age and decreased with thermal time after excision as a result of root decomposition. Single factors alone do not appear to explain the strength-diameter relationship, and both strength/stiffness and dry density may vary between different layers of tissue within a single root. Results will be discussed to consider how we can achieve a more comprehensive understanding of the variation in root biomechanical properties, and its consequences for soil reinforcement. Acknowledgements: The James Hutton Institute receives funding from the Scottish Government. AGB and JAK acknowledge part funding from EPSRC (EP/M020355/1).

  18. DMA thermal analysis of yacon tuberous roots

    NASA Astrophysics Data System (ADS)

    Blahovec, J.; Lahodová, M.; Kindl, M.; Fernández, E. C.

    2013-12-01

    Specimens prepared from yacon roots in first two weeks after harvest were tested by dynamic mechanical analysis thermal analysis at temperatures between 30 and 90°C. No differences between different parts of roots were proved. There were indicated some differences in the test parameters that were caused by short time storage of the roots. One source of the differences was loss of water during the roots storage. The measured modulus increased during short time storage. Detailed study of changes of the modulus during the specimen dynamic mechanical analysis test provided information about different development of the storage and loss moduli during the specimen heating. The observed results can be caused by changes in cellular membranes observed earlier during vegetable heating, and by composition changes due to less stable components of yacon like inulin.

  19. Root gravitropism in maize and Arabidopsis

    NASA Technical Reports Server (NTRS)

    Evans, Michael L.

    1993-01-01

    Research during the period 1 March 1992 to 30 November 1993 focused on improvements in a video digitizer system designed to automate the recording of surface extension in plants responding to gravistimulation. The improvements included modification of software to allow detailed analysis of localized extension patterns in roots of Arabidopsis. We used the system to analyze the role of the postmitotic isodiametric growth zone (a region between the meristem and the elongation zone) in the response of maize roots to auxin, calcium, touch and gravity. We also used the system to analyze short-term auxin and gravitropic responses in mutants of Arabidopsis with reduced auxin sensitivity. In a related project, we studied the relationship between growth rate and surface electrical currents in roots by examining the effects of gravity and thigmostimulation on surface potentials in maize roots.

  20. Leishmanicidal activity of Maytenus illicifolia roots.

    PubMed

    Alvarenga, Nelson; Canela, N; Gómez, R; Yaluff, G; Maldonado, M

    2008-07-01

    In vitro evaluation of leishmanicidal activity of aqueous and ethanolic extracts of Maytenus illicifolia against three species of Leishmania. The root extracts showed differential activity against parasites, whereas the aerial part of the extracts was inactive.

  1. "Roots" Touched Children: Planned or Not

    ERIC Educational Resources Information Center

    Greathouse, Betty

    1977-01-01

    Explores children's reactions to the televised version of Alex Haley's "Roots" through interviews with thirty 8-year-old third-graders (10 Black, 10 Mexican-American, 10 White) from two classrooms in South Phoenix, Arizona. (BF/JH)

  2. Hidden branches: developments in root system architecture.

    PubMed

    Osmont, Karen S; Sibout, Richard; Hardtke, Christian S

    2007-01-01

    The root system is fundamentally important for plant growth and survival because of its role in water and nutrient uptake. Therefore, plants rely on modulation of root system architecture (RSA) to respond to a changing soil environment. Although RSA is a highly plastic trait and varies both between and among species, the basic root system morphology and its plasticity are controlled by inherent genetic factors. These mediate the modification of RSA, mostly at the level of root branching, in response to a suite of biotic and abiotic factors. Recent progress in the understanding of the molecular basis of these responses suggests that they largely feed through hormone homeostasis and signaling pathways. Novel factors implicated in the regulation of RSA in response to the myriad endogenous and exogenous signals are also increasingly isolated through alternative approaches such as quantitative trait locus analysis.

  3. Root apex transition zone as oscillatory zone.

    PubMed

    Baluška, František; Mancuso, Stefano

    2013-01-01

    Root apex of higher plants shows very high sensitivity to environmental stimuli. The root cap acts as the most prominent plant sensory organ; sensing diverse physical parameters such as gravity, light, humidity, oxygen, and critical inorganic nutrients. However, the motoric responses to these stimuli are accomplished in the elongation region. This spatial discrepancy was solved when we have discovered and characterized the transition zone which is interpolated between the apical meristem and the subapical elongation zone. Cells of this zone are very active in the cytoskeletal rearrangements, endocytosis and endocytic vesicle recycling, as well as in electric activities. Here we discuss the oscillatory nature of the transition zone which, together with several other features of this zone, suggest that it acts as some kind of command center. In accordance with the early proposal of Charles and Francis Darwin, cells of this root zone receive sensory information from the root cap and instruct the motoric responses of cells in the elongation zone.

  4. Root Apex Transition Zone As Oscillatory Zone

    PubMed Central

    Baluška, František; Mancuso, Stefano

    2013-01-01

    Root apex of higher plants shows very high sensitivity to environmental stimuli. The root cap acts as the most prominent plant sensory organ; sensing diverse physical parameters such as gravity, light, humidity, oxygen, and critical inorganic nutrients. However, the motoric responses to these stimuli are accomplished in the elongation region. This spatial discrepancy was solved when we have discovered and characterized the transition zone which is interpolated between the apical meristem and the subapical elongation zone. Cells of this zone are very active in the cytoskeletal rearrangements, endocytosis and endocytic vesicle recycling, as well as in electric activities. Here we discuss the oscillatory nature of the transition zone which, together with several other features of this zone, suggest that it acts as some kind of command center. In accordance with the early proposal of Charles and Francis Darwin, cells of this root zone receive sensory information from the root cap and instruct the motoric responses of cells in the elongation zone. PMID:24106493

  5. Capillary-Effect Root-Environment System

    NASA Technical Reports Server (NTRS)

    Wright, Bruce D.

    1991-01-01

    Capillary-effect root-environment system (CERES) is experimental apparatus for growing plants in nutrient solutions. Solution circulated at slight tension in cavity filled with plastic screen and covered by porous plastic membrane. By adsorptive attraction, root draws solution through membrane. Conceived for use in microgravity of space, also finds terrestrial application in germinating seedlings, because it protects them from extremes of temperature, moisture, and soil pH and from overexposure to fertilizers and herbicides.

  6. Anatomical aspects of angiosperm root evolution

    PubMed Central

    Seago, James L.; Fernando, Danilo D.

    2013-01-01

    Background and Aims Anatomy had been one of the foundations in our understanding of plant evolutionary trends and, although recent evo-devo concepts are mostly based on molecular genetics, classical structural information remains useful as ever. Of the various plant organs, the roots have been the least studied, primarily because of the difficulty in obtaining materials, particularly from large woody species. Therefore, this review aims to provide an overview of the information that has accumulated on the anatomy of angiosperm roots and to present possible evolutionary trends between representatives of the major angiosperm clades. Scope This review covers an overview of the various aspects of the evolutionary origin of the root. The results and discussion focus on angiosperm root anatomy and evolution covering representatives from basal angiosperms, magnoliids, monocots and eudicots. We use information from the literature as well as new data from our own research. Key Findings The organization of the root apical meristem (RAM) of Nymphaeales allows for the ground meristem and protoderm to be derived from the same group of initials, similar to those of the monocots, whereas in Amborellales, magnoliids and eudicots, it is their protoderm and lateral rootcap which are derived from the same group of initials. Most members of Nymphaeales are similar to monocots in having ephemeral primary roots and so adventitious roots predominate, whereas Amborellales, Austrobaileyales, magnoliids and eudicots are generally characterized by having primary roots that give rise to a taproot system. Nymphaeales and monocots often have polyarch (heptarch or more) steles, whereas the rest of the basal angiosperms, magnoliids and eudicots usually have diarch to hexarch steles. Conclusions Angiosperms exhibit highly varied structural patterns in RAM organization; cortex, epidermis and rootcap origins; and stele patterns. Generally, however, Amborellales, magnoliids and, possibly

  7. Mapping gene activity of Arabidopsis root hairs

    PubMed Central

    2013-01-01

    Background Quantitative information on gene activity at single cell-type resolution is essential for the understanding of how cells work and interact. Root hairs, or trichoblasts, tubular-shaped outgrowths of specialized cells in the epidermis, represent an ideal model for cell fate acquisition and differentiation in plants. Results Here, we provide an atlas of gene and protein expression in Arabidopsis root hair cells, generated by paired-end RNA sequencing and LC/MS-MS analysis of protoplasts from plants containing a pEXP7-GFP reporter construct. In total, transcripts of 23,034 genes were detected in root hairs. High-resolution proteome analysis led to the reliable identification of 2,447 proteins, 129 of which were differentially expressed between root hairs and non-root hair tissue. Dissection of pre-mRNA splicing patterns showed that all types of alternative splicing were cell type-dependent, and less complex in EXP7-expressing cells when compared to non-root hair cells. Intron retention was repressed in several transcripts functionally related to root hair morphogenesis, indicative of a cell type-specific control of gene expression by alternative splicing of pre-mRNA. Concordance between mRNA and protein expression was generally high, but in many cases mRNA expression was not predictive for protein abundance. Conclusions The integrated analysis shows that gene activity in root hairs is dictated by orchestrated, multilayered regulatory mechanisms that allow for a cell type-specific composition of functional components. PMID:23800126

  8. Relationships between root respiration rate and root morphology, chemistry and anatomy in Larix gmelinii and Fraxinus mandshurica.

    PubMed

    Jia, Shuxia; McLaughlin, Neil B; Gu, Jiacun; Li, Xingpeng; Wang, Zhengquan

    2013-06-01

    Tree roots are highly heterogeneous in form and function. Previous studies revealed that fine root respiration was related to root morphology, tissue nitrogen (N) concentration and temperature, and varied with both soil depth and season. The underlying mechanisms governing the relationship between root respiration and root morphology, chemistry and anatomy along the root branch order have not been addressed. Here, we examined these relationships of the first- to fifth-order roots for near surface roots (0-10 cm) of 22-year-old larch (Larix gmelinii L.) and ash (Fraxinus mandshurica L.) plantations. Root respiration rate at 18 °C was measured by gas phase O2 electrodes across the first five branching order roots (the distal roots numbered as first order) at three times of the year. Root parameters of root diameter, specific root length (SRL), tissue N concentration, total non-structural carbohydrates (starch and soluble sugar) concentration (TNC), cortical thickness and stele diameter were also measured concurrently. With increasing root order, root diameter, TNC and the ratio of root TNC to tissue N concentration increased, while the SRL, tissue N concentration and cortical proportion decreased. Root respiration rate also monotonically decreased with increasing root order in both species. Cortical tissue (including exodermis, cortical parenchyma and endodermis) was present in the first three order roots, and cross sections of the cortex for the first-order root accounted for 68% (larch) and 86% (ash) of the total cross section of the root. Root respiration was closely related to root traits such as diameter, SRL, tissue N concentration, root TNC : tissue N ratio and stele-to-root diameter proportion among the first five orders, which explained up to 81-94% of variation in the rate of root respiration for larch and up to 83-93% for ash. These results suggest that the systematic variations of root respiration rate within tree fine root system are possibly due to the

  9. Lectin Binding to the Root and Root Hair Tips of the Tropical Legume Macroptilium atropurpureum Urb

    PubMed Central

    Ridge, R. W.; Rolfe, B. G.

    1986-01-01

    Ten fluorescein isothiocyanate-labeled lectins were tested on the roots of the tropical legume Macroptilium atropurpureum Urb. Four of these (concanavalin A, peanut agglutinin, Ricinis communis agglutinin I [RCA-I], wheat germ agglutinin) were found to bind to the exterior of root cap cells, the root cap slime, and the channels between epidermal cells in the root elongation zone. One of these lectins, RCA-I, bound to the root hair tips in the mature and emerging hair zones and also to sites at which root hairs were only just emerging. There was no RCA-I binding to immature trichoblasts. Preincubation of these lectins with their hapten sugars eliminated all types of root cell binding. By using a microinoculation technique, preincubation of the root surface with RCA-I lectin was found to inhibit infection and nodulation by Rhizobium spp. Preincubation of the root surface with the RCA-I hapten β-d-galactose or a mixture of RCA-I lectin and its hapten failed to inhibit nodulation. Application of RCA-I lectin to the root surface caused no apparent detrimental effects to the root hair cells and did not prevent the growth of root hairs. The lectin did not prevent Rhizobium sp. motility or viability even after 24 h of incubation. It was concluded that the RCA-I lectin-specific sugar β-d-galactose may be involved in the recognition or early infection stages, or both, in the Rhizobium sp. infection of M. atropurpureum. Images PMID:16346989

  10. [Apical root pins of high-karat gold alloys for resected roots].

    PubMed

    Handtmann, S; Lindemann, W; Sculte, W

    1989-02-01

    Following earlier studies on corrosion of silver pins in the root canal experience will be presented with the use of high-karat gold pins for apical closure of root amputations. The commercially available standardized Ackermann silver pins were replaced by high-karat gold pins of similar Vicker hardness and inserted in 218 patients with 264 root amputations since 1986. A clinical and radiological follow-up demonstrated a success rate of over 90%.

  11. Competing neighbors: light perception and root function.

    PubMed

    Gundel, Pedro E; Pierik, Ronald; Mommer, Liesje; Ballaré, Carlos L

    2014-09-01

    Plant responses to competition have often been described as passive consequences of reduced resource availability. However, plants have mechanisms to forage for favorable conditions and anticipate competition scenarios. Despite the progresses made in understanding the role of light signaling in modulating plant-plant interactions, little is known about how plants use and integrate information gathered by their photoreceptors aboveground to regulate performance belowground. Given that the phytochrome family of photoreceptors plays a key role in the acquisition of information about the proximity of neighbors and canopy cover, it is tempting to speculate that changes in the red:far-red (R:FR) ratio perceived by aboveground plant parts have important implications shaping plant behavior belowground. Exploring data from published experiments, we assess the neglected role of light signaling in the control of root function. The available evidence indicates that plant exposure to low R:FR ratios affects root growth and morphology, root exudate profiles, and interactions with beneficial soil microorganisms. Although dependent on species identity, signals perceived aboveground are likely to affect root-to-root interactions. Root systems could also be guided to deploy new growth predominantly in open areas by light signals perceived by the shoots. Studying interactions between above- and belowground plant-plant signaling is expected to improve our understanding of the mechanisms of plant competition.

  12. Vertical root fractures and their management

    PubMed Central

    Khasnis, Sandhya Anand; Kidiyoor, Krishnamurthy Haridas; Patil, Anand Basavaraj; Kenganal, Smita Basavaraj

    2014-01-01

    Vertical root fractures associated with endodontically treated teeth and less commonly in vital teeth represent one of the most difficult clinical problems to diagnose and treat. In as much as there are no specific symptoms, diagnosis can be difficult. Clinical detection of this condition by endodontists is becoming more frequent, where as it is rather underestimated by the general practitioners. Since, vertical root fractures almost exclusively involve endodontically treated teeth; it often becomes difficult to differentiate a tooth with this condition from an endodontically failed one or one with concomitant periodontal involvement. Also, a tooth diagnosed for vertical root fracture is usually extracted, though attempts to reunite fractured root have been done in various studies with varying success rates. Early detection of a fractured root and extraction of the tooth maintain the integrity of alveolar bone for placement of an implant. Cone beam computed tomography has been shown to be very accurate in this regard. This article focuses on the diagnostic and treatment strategies, and discusses about predisposing factors which can be useful in the prevention of vertical root fractures. PMID:24778502

  13. Profiling Gene Expression in Germinating Brassica Roots.

    PubMed

    Park, Myoung Ryoul; Wang, Yi-Hong; Hasenstein, Karl H

    2014-01-01

    Based on previously developed solid-phase gene extraction (SPGE) we examined the mRNA profile in primary roots of Brassica rapa seedlings for highly expressed genes like ACT7 (actin7), TUB (tubulin1), UBQ (ubiquitin), and low expressed GLK (glucokinase) during the first day post-germination. The assessment was based on the mRNA load of the SPGE probe of about 2.1 ng. The number of copies of the investigated genes changed spatially along the length of primary roots. The expression level of all genes differed significantly at each sample position. Among the examined genes ACT7 expression was most even along the root. UBQ was highest at the tip and root-shoot junction (RS). TUB and GLK showed a basipetal gradient. The temporal expression of UBQ was highest in the MZ 9 h after primary root emergence and higher than at any other sample position. Expressions of GLK in EZ and RS increased gradually over time. SPGE extraction is the result of oligo-dT and oligo-dA hybridization and the results illustrate that SPGE can be used for gene expression profiling at high spatial and temporal resolution. SPGE needles can be used within two weeks when stored at 4 °C. Our data indicate that gene expression studies that are based on the entire root miss important differences in gene expression that SPGE is able to resolve for example growth adjustments during gravitropism.

  14. Extracellular DNA: the tip of root defenses?

    PubMed

    Hawes, Martha C; Curlango-Rivera, Gilberto; Wen, Fushi; White, Gerard J; Vanetten, Hans D; Xiong, Zhongguo

    2011-06-01

    This review discusses how extracellular DNA (exDNA) might function in plant defense, and at what level(s) of innate immunity this process might operate. A new role for extracellular factors in mammalian defense has been described in a series of studies. These studies reveal that cells including neutrophils, eosinophils, and mast cells produce 'extracellular traps' (ETs) consisting of histone-linked exDNA. When pathogens are attracted to such ETs, they are trapped and killed. When the exDNA component of ETs is degraded, trapping is impaired and resistance against invasion is reduced. Conversely, mutation of microbial genes encoding exDNases that degrade exDNA results in loss of virulence. This discovery that exDNases are virulence factors opens new avenues for disease control. In plants, exDNA is required for defense of the root tip. Innate immunity-related proteins are among a group of >100 proteins secreted from the root cap and root border cell populations. Direct tests revealed that exDNA also is rapidly synthesized and exported from the root tip. When this exDNA is degraded by the endonuclease DNase 1, root tip resistance to fungal infection is lost; when the polymeric structure is degraded more slowly, by the exonuclease BAL31, loss of resistance to fungal infection is delayed accordingly. The results suggest that root border cells may function in a manner analogous to that which occurs in mammalian cells.

  15. New insights into root gravitropic signalling

    PubMed Central

    Sato, Ethel Mendocilla; Hijazi, Hussein; Bennett, Malcolm J.; Vissenberg, Kris; Swarup, Ranjan

    2015-01-01

    An important feature of plants is the ability to adapt their growth towards or away from external stimuli such as light, water, temperature, and gravity. These responsive plant growth movements are called tropisms and they contribute to the plant’s survival and reproduction. Roots modulate their growth towards gravity to exploit the soil for water and nutrient uptake, and to provide anchorage. The physiological process of root gravitropism comprises gravity perception, signal transmission, growth response, and the re-establishment of normal growth. Gravity perception is best explained by the starch–statolith hypothesis that states that dense starch-filled amyloplasts or statoliths within columella cells sediment in the direction of gravity, resulting in the generation of a signal that causes asymmetric growth. Though little is known about the gravity receptor(s), the role of auxin linking gravity sensing to the response is well established. Auxin influx and efflux carriers facilitate creation of a differential auxin gradient between the upper and lower side of gravistimulated roots. This asymmetric auxin gradient causes differential growth responses in the graviresponding tissue of the elongation zone, leading to root curvature. Cell biological and mathematical modelling approaches suggest that the root gravitropic response begins within minutes of a gravity stimulus, triggering genomic and non-genomic responses. This review discusses recent advances in our understanding of root gravitropism in Arabidopsis thaliana and identifies current challenges and future perspectives. PMID:25547917

  16. Adaptive significance of root grafting in trees

    SciTech Connect

    Loehle, C.; Jones, R.

    1988-12-31

    Root grafting has long been observed in forest trees but the adaptive significance of this trait has not been fully explained. Various authors have proposed that root grafting between trees contributes to mechanical support by linking adjacent root systems. Keeley proposes that this trait would be of greatest advantage in swamps where soils provide poor mechanical support. He provides as evidence a greenhouse study of Nyssa sylvatica Marsh in which seedlings of swamp provenance formed between-individual root grafts more frequently than upland provenance seedlings. In agreement with this within-species study, Keeley observed that arid zone species rarely exhibit grafts. Keeley also demonstrated that vines graft less commonly than trees, and herbs never do. Since the need for mechanical support coincides with this trend, these data seem to support his model. In this paper, the authors explore the mechanisms and ecological significance of root grafting, leading to predictions of root grafting incidence. Some observations support and some contradict the mechanical support hypothesis.

  17. ASTROCULTURE (TM) root metabolism and cytochemical analysis

    NASA Technical Reports Server (NTRS)

    Porterfield, D. M.; Barta, D. J.; Ming, D. W.; Morrow, R. C.; Musgrave, M. E.

    2000-01-01

    Physiology of the root system is dependent upon oxygen availability and tissue respiration. During hypoxia nutrient and water acquisition may be inhibited, thus affecting the overall biochemical and physiological status of the plant. For the Astroculture (TM) plant growth hardware, the availability of oxygen in the root zone was measured by examining the changes in alcohol dehydrogenase (ADH) activity within the root tissue. ADH activity is a sensitive biochemical indicator of hypoxic conditions in plants and was measured in both spaceflight and control roots. In addition to the biochemical enzyme assays, localization of ADH in the root tissue was examined cytochemically. The results of these analyses showed that ADH activity increased significantly as a result of spaceflight exposure. Enzyme activity increased 248% to 304% in dwarf wheat when compared with the ground controls and Brassica showed increases between 334% and 579% when compared with day zero controls. Cytochemical staining revealed no differences in ADH tissue localization in any of the dwarf wheat treatments. These results show the importance of considering root system oxygenation in designing and building nutrient delivery hardware for spaceflight plant cultivation and confirm previous reports of an ADH response associated with spaceflight exposure.

  18. Modeling vegetation rooting strategies on a hillslope

    NASA Astrophysics Data System (ADS)

    Sivandran, G.; Bras, R. L.

    2011-12-01

    The manner in which water and energy is partitioned and redistributed along a hillslope is the result of complex coupled ecohydrological interactions between the climatic, soils, topography and vegetation operating over a wide range of spatiotemporal scales. Distributed process based modeling creates a framework through which the interaction of vegetation with the subtle differences in the spatial and temporal dynamics of soil moisture that arise under localized abiotic conditions along a hillslope can be simulated and examined. One deficiency in the current dynamic vegetation models is the one sided manner in which vegetation responds to soil moisture dynamics. Above ground, vegetation is given the freedom to dynamically evolve through alterations in fractional vegetation cover and/or canopy height and density; however below ground rooting profiles are simplistically represented and often held constant in time and space. The need to better represent the belowground role of vegetation through dynamic rooting strategies is fundamental in capturing the magnitude and timing of water and energy fluxes between the atmosphere and land surface. In order to allow vegetation to adapt to gradients in soil moisture a dynamic rooting scheme was incorporated into tRIBS+VEGGIE (a physically based distributed ecohydrological model). The dynamic rooting scheme allows vegetation the freedom to adapt their rooting depth and distribution in response abiotic conditions in a way that more closely mimics observed plant behavior. The incorporation of this belowground plasticity results in vegetation employing a suite of rooting strategies based on soil texture, climatic conditions and location on the hillslope.

  19. Gene expression regulation in roots under drought.

    PubMed

    Janiak, Agnieszka; Kwaśniewski, Mirosław; Szarejko, Iwona

    2016-02-01

    Stress signalling and regulatory networks controlling expression of target genes are the basis of plant response to drought. Roots are the first organs exposed to water deficiency in the soil and are the place of drought sensing. Signalling cascades transfer chemical signals toward the shoot and initiate molecular responses that lead to the biochemical and morphological changes that allow plants to be protected against water loss and to tolerate stress conditions. Here, we present an overview of signalling network and gene expression regulation pathways that are actively induced in roots under drought stress. In particular, the role of several transcription factor (TF) families, including DREB, AP2/ERF, NAC, bZIP, MYC, CAMTA, Alfin-like and Q-type ZFP, in the regulation of root response to drought are highlighted. The information provided includes available data on mutual interactions between these TFs together with their regulation by plant hormones and other signalling molecules. The most significant downstream target genes and molecular processes that are controlled by the regulatory factors are given. These data are also coupled with information about the influence of the described regulatory networks on root traits and root development which may translate to enhanced drought tolerance. This is the first literature survey demonstrating the gene expression regulatory machinery that is induced by drought stress, presented from the perspective of roots.

  20. Vertical root fractures and their management.

    PubMed

    Khasnis, Sandhya Anand; Kidiyoor, Krishnamurthy Haridas; Patil, Anand Basavaraj; Kenganal, Smita Basavaraj

    2014-03-01

    Vertical root fractures associated with endodontically treated teeth and less commonly in vital teeth represent one of the most difficult clinical problems to diagnose and treat. In as much as there are no specific symptoms, diagnosis can be difficult. Clinical detection of this condition by endodontists is becoming more frequent, where as it is rather underestimated by the general practitioners. Since, vertical root fractures almost exclusively involve endodontically treated teeth; it often becomes difficult to differentiate a tooth with this condition from an endodontically failed one or one with concomitant periodontal involvement. Also, a tooth diagnosed for vertical root fracture is usually extracted, though attempts to reunite fractured root have been done in various studies with varying success rates. Early detection of a fractured root and extraction of the tooth maintain the integrity of alveolar bone for placement of an implant. Cone beam computed tomography has been shown to be very accurate in this regard. This article focuses on the diagnostic and treatment strategies, and discusses about predisposing factors which can be useful in the prevention of vertical root fractures. PMID:24778502

  1. Earliest rooting system and root : shoot ratio from a new Zosterophyllum plant.

    PubMed

    Hao, Shougang; Xue, Jinzhuang; Guo, Dali; Wang, Deming

    2010-01-01

    The enhanced chemical weathering by rooted vascular plants during the Silurian-Devonian period played a crucial role in altering global biogeochemical cycles and atmospheric environments; however, the documentation of early root morphology and physiology is scarce because the existing fossils are mostly incomplete. Here, we report an entire, uprooted specimen of a new Zosterophyllum Penhallow, named as Z. shengfengense, from the Early Devonian Xitun Formation (Lochkovian, c. 413 Myr old) of Yunnan, south China. This plant has the most ancient known record of a rooting system. The plant consists of aerial axes of 98 mm in height, showing a tufted habit, and a rhizome bearing a fibrous-like rooting system, c. 20 mm in length. The rhizome shows masses of branchings, which produce upwardly directed aerial axes and downwardly directed root-like axes. The completeness of Z. shengfengense made it possible to estimate the biomass allocation and root : shoot ratio. The root : shoot ratio of this early plant is estimated at a mean value of 0.028, and the root-like axes constitute only c. 3% of the total biomass. Zosterophyllum shengfengense was probably a semi-aquatic plant with efficient water use or a strong uptake capacity of the root-like axes.

  2. Adhesive Approach Using Internal Coping for Vertical Root Fractured Teeth with Flared Root Canals.

    PubMed

    Takeuchi, Shuhei; Sekita, Toshiaki; Kobayashi, Ken'ichi

    2015-01-01

    Vertical root fractures are often observed in teeth with endodontic treatment and post space preparation. Frequently, because such teeth have flared root canals with thin dentin walls, conventional treatments are disadvantageous in terms of adhesiveness, sealability and risk of refracture. Here we devised an intentional replantation method that uses internal resin coping, with a reinforcing effect on thin root canal dentin. In two patients treated with this method, satisfactory conditions have been maintained. This report suggests that an intentional replantation method in which an internal resin coping is employed may be a useful therapy for fractured teeth with flared root canals.

  3. Ozone decreases spring root growth and root carbohydrate content in ponderosa pine the year following exposure

    SciTech Connect

    Andersen, C.P.; Hogsett, W.E.; Wessling, R.; Plocher, M.

    1991-01-01

    Storage carbohydrates are extremely important for new shoot and root development following dormancy or during periods of high stress. The hypothesis that ozone decreases carbohydrate storage and decreases new root growth during the year following exposure was investigated. The results suggest that (1) ponderosa pine seedlings exposed to 122 and 169 ppm hrs ozone for one season have significantly less root starch reserves available just prior to and during bud break the following year, and (2) spring root growth is decreased following ozone exposure. The carry-over effects of ozone stress may be important in long-lived perennial species which are annually subjected to ozone.

  4. Adhesive Approach Using Internal Coping for Vertical Root Fractured Teeth with Flared Root Canals.

    PubMed

    Takeuchi, Shuhei; Sekita, Toshiaki; Kobayashi, Ken'ichi

    2015-01-01

    Vertical root fractures are often observed in teeth with endodontic treatment and post space preparation. Frequently, because such teeth have flared root canals with thin dentin walls, conventional treatments are disadvantageous in terms of adhesiveness, sealability and risk of refracture. Here we devised an intentional replantation method that uses internal resin coping, with a reinforcing effect on thin root canal dentin. In two patients treated with this method, satisfactory conditions have been maintained. This report suggests that an intentional replantation method in which an internal resin coping is employed may be a useful therapy for fractured teeth with flared root canals. PMID:26373031

  5. New insights to lateral rooting: Differential responses to heterogeneous nitrogen availability among maize root types

    PubMed Central

    Yu, Peng; White, Philip J; Li, Chunjian

    2015-01-01

    Historical domestication and the "Green revolution" have both contributed to the evolution of modern, high-performance crops. Together with increased irrigation and application of chemical fertilizers, these efforts have generated sufficient food for the growing global population. Root architecture, and in particular root branching, plays an important role in the acquisition of water and nutrients, plant performance, and crop yield. Better understanding of root growth and responses to the belowground environment could contribute to overcoming the challenges faced by agriculture today. Manipulating the abilities of crop root systems to explore and exploit the soil environment could enable plants to make the most of soil resources, increase stress tolerance and improve grain yields, while simultaneously reducing environmental degradation. In this article it is noted that the control of root branching, and the responses of root architecture to nitrate availability, differ between root types and between plant species. Since the control of root branching depends upon both plant species and root type, further work is urgently required to determine the appropriate genes to manipulate to improve resource acquisition by specific crops. PMID:26443081

  6. RootNav: Navigating Images of Complex Root Architectures1[C][W

    PubMed Central

    Pound, Michael P.; French, Andrew P.; Atkinson, Jonathan A.; Wells, Darren M.; Bennett, Malcolm J.; Pridmore, Tony

    2013-01-01

    We present a novel image analysis tool that allows the semiautomated quantification of complex root system architectures in a range of plant species grown and imaged in a variety of ways. The automatic component of RootNav takes a top-down approach, utilizing the powerful expectation maximization classification algorithm to examine regions of the input image, calculating the likelihood that given pixels correspond to roots. This information is used as the basis for an optimization approach to root detection and quantification, which effectively fits a root model to the image data. The resulting user experience is akin to defining routes on a motorist’s satellite navigation system: RootNav makes an initial optimized estimate of paths from the seed point to root apices, and the user is able to easily and intuitively refine the results using a visual approach. The proposed method is evaluated on winter wheat (Triticum aestivum) images (and demonstrated on Arabidopsis [Arabidopsis thaliana], Brassica napus, and rice [Oryza sativa]), and results are compared with manual analysis. Four exemplar traits are calculated and show clear illustrative differences between some of the wheat accessions. RootNav, however, provides the structural information needed to support extraction of a wider variety of biologically relevant measures. A separate viewer tool is provided to recover a rich set of architectural traits from RootNav’s core representation. PMID:23766367

  7. New insights to lateral rooting: Differential responses to heterogeneous nitrogen availability among maize root types.

    PubMed

    Yu, Peng; White, Philip J; Li, Chunjian

    2015-01-01

    Historical domestication and the "Green revolution" have both contributed to the evolution of modern, high-performance crops. Together with increased irrigation and application of chemical fertilizers, these efforts have generated sufficient food for the growing global population. Root architecture, and in particular root branching, plays an important role in the acquisition of water and nutrients, plant performance, and crop yield. Better understanding of root growth and responses to the belowground environment could contribute to overcoming the challenges faced by agriculture today. Manipulating the abilities of crop root systems to explore and exploit the soil environment could enable plants to make the most of soil resources, increase stress tolerance and improve grain yields, while simultaneously reducing environmental degradation. In this article it is noted that the control of root branching, and the responses of root architecture to nitrate availability, differ between root types and between plant species. Since the control of root branching depends upon both plant species and root type, further work is urgently required to determine the appropriate genes to manipulate to improve resource acquisition by specific crops. PMID:26443081

  8. Melatonin promotes seminal root elongation and root growth in transgenic rice after germination.

    PubMed

    Park, Sangkyu; Back, Kyoungwhan

    2012-11-01

    The effect of melatonin on root growth after germination was examined in transgenic rice seedlings expressing sheep serotonin N-acetyltransferase (NAT). Enhanced melatonin levels were found in T(3) homozygous seedlings because of the ectopic overexpression of sheep NAT, which is believed to be the rate-limiting enzyme in melatonin biosynthesis in animals. Compared with wild-type rice seeds, the transgenic rice seeds showed enhanced seminal root growth and an analogous number of adventitious roots 4 and 10 days after seeding on half-strength Murashige and Skoog medium. The enhanced initial seminal root growth in the transgenic seedlings matched their increased root biomass well. We also found that treatment with 0.5 and 1 μM melatonin promoted seminal root growth of the wild type under continuous light. These results indicate that melatonin plays an important role in regulating both seminal root length and root growth after germination in monocotyledonous rice plants. This is the first report on the effects of melatonin on root growth in gain-of-function mutant plants that produce high levels of melatonin.

  9. Cadmium translocation by contractile roots differs from that in regular, non-contractile roots

    PubMed Central

    Lux, Alexander; Lackovič, Andrej; Van Staden, Johannes; Lišková, Desana; Kohanová, Jana; Martinka, Michal

    2015-01-01

    Background and Aims Contractile roots are known and studied mainly in connection with the process of shrinkage of their basal parts, which acts to pull the shoot of the plant deeper into the ground. Previous studies have shown that the specific structure of these roots results in more intensive water uptake at the base, which is in contrast to regular root types. The purpose of this study was to find out whether the basal parts of contractile roots are also more active in translocation of cadmium to the shoot. Methods Plants of the South African ornamental species Tritonia gladiolaris were cultivated in vitro for 2 months, at which point they possessed well-developed contractile roots. They were then transferred to Petri dishes with horizontally separated compartments of agar containing 50 µmol Cd(NO3)2 in the region of the root base or the root apex. Seedlings of 4-d-old maize (Zea mays) plants, which do not possess contractile roots, were also transferred to similar Petri dishes. The concentrations of Cd in the leaves of the plants were compared after 10 d of cultivation. Anatomical analyses of Tritonia roots were performed using appropriately stained freehand cross-sections. Key Results The process of contraction required specific anatomical adaptation of the root base in Tritonia, with less lignified and less suberized tissues in comparison with the subapical part of the root. These unusual developmental characteristics were accompanied by more intensive translocation of Cd ions from the basal part of contractile roots to the leaves than from the apical–subapical root parts. The opposite effects were seen in the non-contractile roots of maize, with higher uptake and transport by the apical parts of the root and lower uptake and transport by the basal part. Conclusions The specific characteristics of contractile roots may have a significant impact on the uptake of ions, including toxic metals from the soil surface layers. This may be important for plant

  10. Plant root tortuosity: an indicator of root path formation in soil with different composition and density

    PubMed Central

    Popova, Liyana; van Dusschoten, Dagmar; Nagel, Kerstin A.; Fiorani, Fabio; Mazzolai, Barbara

    2016-01-01

    Background and Aims Root soil penetration and path optimization are fundamental for root development in soil. We describe the influence of soil strength on root elongation rate and diameter, response to gravity, and root-structure tortuosity, estimated by average curvature of primary maize roots. Methods Soils with different densities (1·5, 1·6, 1·7 g cm−3), particle sizes (sandy loam; coarse sand mixed with sandy loam) and layering (monolayer, bilayer) were used. In total, five treatments were performed: Mix_low with mixed sand low density (three pots, 12 plants), Mix_medium - mixed sand medium density (three pots, 12 plants), Mix_high - mixed sand high density (three pots, ten plants), Loam_low sandy loam soil low density (four pots, 16 plants), and Bilayer with top layer of sandy loam and bottom layer mixed sand both of low density (four pots, 16 plants). We used non-invasive three-dimensional magnetic resonance imaging to quantify effects of these treatments. Key Results Roots grew more slowly [root growth rate (mm h–1); decreased 50 %] with increased diameters [root diameter (mm); increased 15 %] in denser soils (1·7 vs. 1·5 g cm–3). Root response to gravity decreased 23 % with increased soil compaction, and tortuosity increased 10 % in mixed sand. Response to gravity increased 39 % and tortuosity decreased 3 % in sandy loam. After crossing a bilayered–soil interface, roots grew more slowly, similar to roots grown in soil with a bulk density of 1·64 g cm–3, whereas the actual experimental density was 1·48±0·02 g cm–3. Elongation rate and tortuosity were higher in Mix_low than in Loam_low. Conclusions The present study increases our existing knowledge of the influence of physical soil properties on root growth and presents new assays for studying root growth dynamics in non-transparent media. We found that root tortuosity is indicative of root path selection, because it could result from both mechanical deflection and

  11. New insights to lateral rooting: Differential responses to heterogeneous nitrogen availability among maize root types.

    PubMed

    Yu, Peng; White, Philip J; Li, Chunjian

    2015-01-01

    Historical domestication and the "Green revolution" have both contributed to the evolution of modern, high-performance crops. Together with increased irrigation and application of chemical fertilizers, these efforts have generated sufficient food for the growing global population. Root architecture, and in particular root branching, plays an important role in the acquisition of water and nutrients, plant performance, and crop yield. Better understanding of root growth and responses to the belowground environment could contribute to overcoming the challenges faced by agriculture today. Manipulating the abilities of crop root systems to explore and exploit the soil environment could enable plants to make the most of soil resources, increase stress tolerance and improve grain yields, while simultaneously reducing environmental degradation. In this article it is noted that the control of root branching, and the responses of root architecture to nitrate availability, differ between root types and between plant species. Since the control of root branching depends upon both plant species and root type, further work is urgently required to determine the appropriate genes to manipulate to improve resource acquisition by specific crops.

  12. A new Approach for Quantifying Root-Reinforcement of Streambanks: the RipRoot Model

    NASA Astrophysics Data System (ADS)

    Pollen, N. L.; Simon, A.

    2003-12-01

    Riparian vegetation plays an important role in controlling geotechnical and fluvial processes acting along and within streambanks through the binding effects of roots. Quantification of this mechanical effect is therefore essential to accurately model streambank stability. Until now, most attempts to include the effects of root reinforcement by riparian vegetation have used root-cohesion values estimated using the Wu et al. (1979) equation, requiring the tensile strengths and diameters of the roots crossing the potential shear-plane. However, the Wu et al. equation is a static model that assumes that all roots break, and that they all break simultaneously. Field observations and laboratory experiments have shown that in reality the roots do not all break simultaneously, and that the breaking of roots during mass failure is in fact a dynamic process. Static models such as the Wu et al. equation are therefore likely to produce overestimations of cohesion due to roots. As a response to this concern, a dynamic root reinforcement model (RipRoot) was developed, based on the concepts of fiber bundle models (FBM's) used in materials science. Within the model the root-soil system is loaded incrementally resulting in progressive root breaking and redistribution of stresses from the broken roots to the remaining intact roots in the soil matrix. The redistribution and loading process continues until either all of the roots have broken, or equilibrium is reached where the root network supports the driving force imposed on the bank. The increase in bank cohesion using the static Wu et al. equation are 18% to 38% higher than RipRoot for riparian tree species, including Black Willow, Sandbar Willow, Cottonwood, River Birch and Eastern Sycamore, and 49% higher for Switch Grass. These variations in cohesion values can have a significant impact on streambank Factor of Safety (Fs) values calculated using the Simon et al. (2000) bank-stability model. For example, a 3m high silt

  13. Modelling water uptake efficiency of root systems

    NASA Astrophysics Data System (ADS)

    Leitner, Daniel; Tron, Stefania; Schröder, Natalie; Bodner, Gernot; Javaux, Mathieu; Vanderborght, Jan; Vereecken, Harry; Schnepf, Andrea

    2016-04-01

    Water uptake is crucial for plant productivity. Trait based breeding for more water efficient crops will enable a sustainable agricultural management under specific pedoclimatic conditions, and can increase drought resistance of plants. Mathematical modelling can be used to find suitable root system traits for better water uptake efficiency defined as amount of water taken up per unit of root biomass. This approach requires large simulation times and large number of simulation runs, since we test different root systems under different pedoclimatic conditions. In this work, we model water movement by the 1-dimensional Richards equation with the soil hydraulic properties described according to the van Genuchten model. Climatic conditions serve as the upper boundary condition. The root system grows during the simulation period and water uptake is calculated via a sink term (after Tron et al. 2015). The goal of this work is to compare different free software tools based on different numerical schemes to solve the model. We compare implementations using DUMUX (based on finite volumes), Hydrus 1D (based on finite elements), and a Matlab implementation of Van Dam, J. C., & Feddes 2000 (based on finite differences). We analyse the methods for accuracy, speed and flexibility. Using this model case study, we can clearly show the impact of various root system traits on water uptake efficiency. Furthermore, we can quantify frequent simplifications that are introduced in the modelling step like considering a static root system instead of a growing one, or considering a sink term based on root density instead of considering the full root hydraulic model (Javaux et al. 2008). References Tron, S., Bodner, G., Laio, F., Ridolfi, L., & Leitner, D. (2015). Can diversity in root architecture explain plant water use efficiency? A modeling study. Ecological modelling, 312, 200-210. Van Dam, J. C., & Feddes, R. A. (2000). Numerical simulation of infiltration, evaporation and shallow

  14. D-Root: a system for cultivating plants with the roots in darkness or under different light conditions.

    PubMed

    Silva-Navas, Javier; Moreno-Risueno, Miguel A; Manzano, Concepción; Pallero-Baena, Mercedes; Navarro-Neila, Sara; Téllez-Robledo, Bárbara; Garcia-Mina, Jose M; Baigorri, Roberto; Gallego, Francisco Javier; del Pozo, Juan C

    2015-10-01

    In nature roots grow in the dark and away from light (negative phototropism). However, most current research in root biology has been carried out with the root system grown in the presence of light. Here, we have engineered a device, called Dark-Root (D-Root), to grow plants in vitro with the aerial part exposed to the normal light/dark photoperiod while the roots are in the dark or exposed to specific wavelengths or light intensities. D-Root provides an efficient system for cultivating a large number of seedlings and easily characterizing root architecture in the dark. At the morphological level, root illumination shortens root length and promotes early emergence of lateral roots, therefore inducing expansion of the root system. Surprisingly, root illumination also affects shoot development, including flowering time. Our analyses also show that root illumination alters the proper response to hormones or abiotic stress (e.g. salt or osmotic stress) and nutrient starvation, enhancing inhibition of root growth. In conclusion, D-Root provides a growing system closer to the natural one for assaying Arabidopsis plants, and therefore its use will contribute to a better understanding of the mechanisms involved in root development, hormonal signaling and stress responses.

  15. D-Root: a system for cultivating plants with the roots in darkness or under different light conditions.

    PubMed

    Silva-Navas, Javier; Moreno-Risueno, Miguel A; Manzano, Concepción; Pallero-Baena, Mercedes; Navarro-Neila, Sara; Téllez-Robledo, Bárbara; Garcia-Mina, Jose M; Baigorri, Roberto; Gallego, Francisco Javier; del Pozo, Juan C

    2015-10-01

    In nature roots grow in the dark and away from light (negative phototropism). However, most current research in root biology has been carried out with the root system grown in the presence of light. Here, we have engineered a device, called Dark-Root (D-Root), to grow plants in vitro with the aerial part exposed to the normal light/dark photoperiod while the roots are in the dark or exposed to specific wavelengths or light intensities. D-Root provides an efficient system for cultivating a large number of seedlings and easily characterizing root architecture in the dark. At the morphological level, root illumination shortens root length and promotes early emergence of lateral roots, therefore inducing expansion of the root system. Surprisingly, root illumination also affects shoot development, including flowering time. Our analyses also show that root illumination alters the proper response to hormones or abiotic stress (e.g. salt or osmotic stress) and nutrient starvation, enhancing inhibition of root growth. In conclusion, D-Root provides a growing system closer to the natural one for assaying Arabidopsis plants, and therefore its use will contribute to a better understanding of the mechanisms involved in root development, hormonal signaling and stress responses. PMID:26312572

  16. Disentangling root system responses to neighbours: identification of novel root behavioural strategies.

    PubMed

    Belter, Pamela R; Cahill, James F

    2015-05-27

    Plants live in a social environment, with interactions among neighbours a ubiquitous aspect of life. Though many of these interactions occur in the soil, our understanding of how plants alter root growth and the patterns of soil occupancy in response to neighbours is limited. This is in contrast to a rich literature on the animal behavioural responses to changes in the social environment. For plants, root behavioural changes that alter soil occupancy patterns can influence neighbourhood size and the frequency or intensity of competition for soil resources; issues of fundamental importance to understanding coexistence and community assembly. Here we report a large comparative study in which individuals of 20 species were grown with and without each of two neighbour species. Through repeated root visualization and analyses, we quantified many putative root behaviours, including the extent to which each species altered aspects of root system growth (e.g. rooting breadth, root length, etc.) in response to neighbours. Across all species, there was no consistent behavioural response to neighbours (i.e. no general tendencies towards root over-proliferation nor avoidance). However, there was a substantial interspecific variation showing a continuum of behavioural variation among the 20 species. Multivariate analyses revealed two novel and predominant root behavioural strategies: (i) size-sensitivity, in which focal plants reduced their overall root system size in response to the presence of neighbours, and (ii) location-sensitivity, where focal plants adjusted the horizontal and vertical placement of their roots in response to neighbours. Of these, size-sensitivity represents the commonly assumed response to competitive encounters-reduced growth. However, location sensitivity is not accounted for in classic models and concepts of plant competition, though it is supported from recent work in plant behavioural ecology. We suggest that these different strategies could have

  17. Tissue response to potential root-end filling materials in infected root canals.

    PubMed

    Chong, B S; Ford, T R; Kariyawasam, S P

    1997-03-01

    The tissue responses to two potential root-end filling materials, a light-cured glass ionomer cement (Vitrebond) and a reinforced zinc oxide-eugenol cement (Kalzinol) were compared with that to amalgam. In 27 premolar teeth of beagle dogs (54 roots), a collection of endodontic pathogenic bacteria was first inoculated into the root canals to induce periapical lesions. On each root, an apicectomy was performed and root-end cavities prepared to receive fillings of each material. The teeth and surrounding jaw were removed after 8 weeks (24 roots) and 4 weeks (30 roots); and they were prepared for histological examination. The tissue response to amalgam fillings after 4 and 8 weeks was marked by moderate or severe inflammation on all roots, and extended > 0.5 mm in 10 out of 18 roots. In contrast, after 8 weeks, the majority of roots filled with Kalzinol showed little or moderate inflammation while the tissue response to Vitrebond was the best of the three materials, and was also less extensive. After 4 weeks, the overall best tissue response was with Kalzinol, followed closely by Vitrebond. The differences between materials for both time periods with either none or few inflammatory cells when compared with that with either moderate or severe inflammation were statistically significant (P < 0.01). Similarly, the differences between materials for both time periods with no inflammation or inflammation extending < 0.2 mm when compared with that with inflammation extending > 0.2 mm (< or = 0.5 mm or > 0.5 mm) were statistically significant (P < 0.01). Both Vitrebond and Kalzinol have potential as root-end filling materials as the tissue response was considerably more favourable than that to amalgam.

  18. Disentangling root system responses to neighbours: identification of novel root behavioural strategies

    PubMed Central

    Belter, Pamela R.; Cahill, James F.

    2015-01-01

    Plants live in a social environment, with interactions among neighbours a ubiquitous aspect of life. Though many of these interactions occur in the soil, our understanding of how plants alter root growth and the patterns of soil occupancy in response to neighbours is limited. This is in contrast to a rich literature on the animal behavioural responses to changes in the social environment. For plants, root behavioural changes that alter soil occupancy patterns can influence neighbourhood size and the frequency or intensity of competition for soil resources; issues of fundamental importance to understanding coexistence and community assembly. Here we report a large comparative study in which individuals of 20 species were grown with and without each of two neighbour species. Through repeated root visualization and analyses, we quantified many putative root behaviours, including the extent to which each species altered aspects of root system growth (e.g. rooting breadth, root length, etc.) in response to neighbours. Across all species, there was no consistent behavioural response to neighbours (i.e. no general tendencies towards root over-proliferation nor avoidance). However, there was a substantial interspecific variation showing a continuum of behavioural variation among the 20 species. Multivariate analyses revealed two novel and predominant root behavioural strategies: (i) size-sensitivity, in which focal plants reduced their overall root system size in response to the presence of neighbours, and (ii) location-sensitivity, where focal plants adjusted the horizontal and vertical placement of their roots in response to neighbours. Of these, size-sensitivity represents the commonly assumed response to competitive encounters—reduced growth. However, location sensitivity is not accounted for in classic models and concepts of plant competition, though it is supported from recent work in plant behavioural ecology. We suggest that these different strategies could have

  19. Ecological Hypothesis of Dentin and Root Caries.

    PubMed

    Takahashi, Nobuhiro; Nyvad, Bente

    2016-01-01

    Recent advances regarding the caries process indicate that ecological phenomena induced by bacterial acid production tilt the de- and remineralization balance of the dental hard tissues towards demineralization through bacterial acid-induced adaptation and selection within the microbiota - from the dynamic stability stage to the aciduric stage via the acidogenic stage [Takahashi and Nyvad, 2008]. Dentin and root caries can also be partly explained by this hypothesis; however, the fact that these tissues contain a considerable amount of organic material suggests that protein degradation is involved in caries formation. In this review, we compiled relevant histological, biochemical, and microbiological information about dentin/root caries and refined the hypothesis by adding degradation of the organic matrix (the proteolytic stage) to the abovementioned stages. Bacterial acidification not only induces demineralization and exposure of the organic matrix in dentin/root surfaces but also activation of dentin-embedded and salivary matrix metalloproteinases and cathepsins. These phenomena initiate degradation of the demineralized organic matrix in dentin/root surfaces. While a bacterial involvement has never been confirmed in the initial degradation of organic material, the detection of proteolytic/amino acid-degrading bacteria and bacterial metabolites in dentin and root caries suggests a bacterial digestion and metabolism of partly degraded matrix. Moreover, bacterial metabolites might induce pulpitis as an inflammatory/immunomodulatory factor. Root and dentin surfaces are always at risk of becoming demineralized in the oral cavity, and exposed organic materials can be degraded by host-derived proteases contained in saliva and dentin itself. New approaches to the prevention and treatment of root/dentin caries are required. PMID:27458979

  20. How can science education foster students' rooting?

    NASA Astrophysics Data System (ADS)

    Østergaard, Edvin

    2015-06-01

    The question of how to foster rooting in science education points towards a double challenge; efforts to prevent (further) uprooting and efforts to promote rooting/re-rooting. Wolff-Michael Roth's paper discusses the uprooting/rooting pair of concepts, students' feeling of alienation and loss of fundamental sense of the earth as ground, and potential consequences for teaching science in a rooted manner. However, the argumentation raises a number of questions which I try to answer. My argumentation rests on Husserl's critique of science and the "ontological reversal", an ontological position where abstract models from science are considered as more real than the everyday reality itself, where abstract, often mathematical, models are taken to be the real causes behind everyday experiences. In this paper, measures towards an "ontological re-reversal" are discussed by drawing on experiences from phenomenon-based science education. I argue that perhaps the most direct and productive way of promoting rooting in science class is by intentionally cultivating the competencies of sensing and aesthetic experience. An aesthetic experience is defined as a precognitive, sensuous experience, an experience that is opened up for through sensuous perception. Conditions for rooting in science education is discussed against three challenges: Restoring the value of aesthetic experience, allowing time for open inquiry and coping with curriculum. Finally, I raise the question whether dimensions like "reality" or "nature" are self-evident for students. In the era of constructivism, with its focus on cognition and knowledge building, the inquiry process itself has become more important than the object of inquiry. I argue that as educators of science teachers we have to emphasize more explicitly "the nature of nature" as a field of exploration.

  1. Cold temperature delays wound healing in postharvest sugarbeet roots

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Storage temperature affects the rate and extent of wound-healing in a number of root and tuber crops. The effect of storage temperature on wound-healing in sugarbeet (Beta vulgaris L.) roots, however, is largely unknown. Wound-healing of sugarbeet roots was investigated using surface-abraded roots s...

  2. 21 CFR 872.3810 - Root canal post.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Root canal post. 872.3810 Section 872.3810 Food... DEVICES DENTAL DEVICES Prosthetic Devices § 872.3810 Root canal post. (a) Identification. A root canal... of the platinum group intended to be cemented into the root canal of a tooth to stabilize and...

  3. 21 CFR 872.3810 - Root canal post.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Root canal post. 872.3810 Section 872.3810 Food... DEVICES DENTAL DEVICES Prosthetic Devices § 872.3810 Root canal post. (a) Identification. A root canal... of the platinum group intended to be cemented into the root canal of a tooth to stabilize and...

  4. 21 CFR 872.3810 - Root canal post.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Root canal post. 872.3810 Section 872.3810 Food... DEVICES DENTAL DEVICES Prosthetic Devices § 872.3810 Root canal post. (a) Identification. A root canal... of the platinum group intended to be cemented into the root canal of a tooth to stabilize and...

  5. 21 CFR 872.3810 - Root canal post.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Root canal post. 872.3810 Section 872.3810 Food... DEVICES DENTAL DEVICES Prosthetic Devices § 872.3810 Root canal post. (a) Identification. A root canal... of the platinum group intended to be cemented into the root canal of a tooth to stabilize and...

  6. 21 CFR 872.3810 - Root canal post.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Root canal post. 872.3810 Section 872.3810 Food... DEVICES DENTAL DEVICES Prosthetic Devices § 872.3810 Root canal post. (a) Identification. A root canal... of the platinum group intended to be cemented into the root canal of a tooth to stabilize and...

  7. Root cortical burden influences drought tolerance in maize

    PubMed Central

    Jaramillo, Raúl E.; Nord, Eric A.; Chimungu, Joseph G.; Brown, Kathleen M.; Lynch, Jonathan P.

    2013-01-01

    Background and Aims Root cortical aerenchyma (RCA) increases water and nutrient acquisition by reducing the metabolic costs of soil exploration. In this study the hypothesis was tested that living cortical area (LCA; transversal root cortical area minus aerenchyma area and intercellular air space) is a better predictor of root respiration, soil exploration and, therefore, drought tolerance than RCA formation or root diameter. Methods RCA, LCA, root respiration, root length and biomass loss in response to drought were evaluated in maize (Zea mays) recombinant inbred lines grown with adequate and suboptimal irrigation in soil mesocosms. Key Results Root respiration was highly correlated with LCA. LCA was a better predictor of root respiration than either RCA or root diameter. RCA reduced respiration of large-diameter roots. Since RCA and LCA varied in different parts of the root system, the effects of RCA and LCA on root length were complex. Greater crown-root LCA was associated with reduced crown-root length relative to total root length. Reduced LCA was associated with improved drought tolerance. Conclusions The results are consistent with the hypothesis that LCA is a driver of root metabolic costs and may therefore have adaptive significance for water acquisition in drying soil. PMID:23618897

  8. Biophoton Emission Induced by Osmotic Stress in Adzuki Bean Root

    NASA Astrophysics Data System (ADS)

    Ohya, Tomoyuki; Oikawa, Noriko; Kawabata, Ryuzou; Okabe, Hirotaka; Kai, Shoichi

    2003-12-01

    In order to evaluate the physiological damage to plants caused by osmotic stress, we have investigated the relationship between the inhibition of root elongation and spontaneous photon emission from the root. Adzuki bean roots were soaked in polyethylene glycol (PEG) solutions for short periods in their early growth stage, and their root length and photon emission were measured afterwards. Consequently, it became clear that the root elongation decreased with the increase of PEG concentration. Moreover, there was a clear correlation between the emission intensity of the cell division area in the root and the inhibition of elongation, though the elongation of individual roots varied to some degree.

  9. Beneficial Microbes Affect Endogenous Mechanisms Controlling Root Development.

    PubMed

    Verbon, Eline H; Liberman, Louisa M

    2016-03-01

    Plants have incredible developmental plasticity, enabling them to respond to a wide range of environmental conditions. Among these conditions is the presence of plant growth-promoting rhizobacteria (PGPR) in the soil. Recent studies show that PGPR affect Arabidopsis thaliana root growth and development by modulating cell division and differentiation in the primary root and influencing lateral root development. These effects lead to dramatic changes in root system architecture that significantly impact aboveground plant growth. Thus, PGPR may promote shoot growth via their effect on root developmental programs. This review focuses on contextualizing root developmental changes elicited by PGPR in light of our understanding of plant-microbe interactions and root developmental biology.

  10. How up- or downslope anchoring affects root reinforcement

    NASA Astrophysics Data System (ADS)

    Giadrossich, Filippo; Schwarz, Massimiliano; Cohen, Denis; Niedda, Marcello

    2016-04-01

    Root reinforcement is important for slope stability. In addition to the important contribution of roots to shear strength along the slip surface, root networks are also recognized to impart stabilization through lateral (parallel to slope) redistribution of forces under tension. The most common method to measure lateral root reinforcement is a pullout test where one root or a bundle of root is pulled out of the soil matrix. This condition represents the case where roots within the mass of a landslide slip out from the upper stable part of the slope. There is also, however, the situation where roots anchored in the upper stable part of the slope slip out from the sliding mass. In the latter it is difficult to quantify root reinforcement and no study has discussed this mechanism. We carried out a new series of laboratory and field experiments using Douglas fir (Pseudotsuga menziesii) roots to quantify how up- or downslope anchoring affects root reinforcement. In addition, we carried out new field pullout tests on coarse roots (larger that 2 mm in diameter, up to 47 mm). Then, considering the state-of-the-art of root reinforcement modeling (the Root Bundle Model), we integrated results from our measurements into the model to verify the magnitude of this effect on overall root reinforcement at the stand scale. Results indicate that the ratio between pullout force and force transferred to the root during soil slip ranges between 0.5 and 1. This indicates that measured pullout force always overestimate the contribution of lateral slipping out roots in situations where the soil slide from anchored roots. This is general the case for root with diameter up to 3-4 mm. Root-size distribution is also a key factor influencing root reinforcement at the forest-stand scale. As most coarse roots break along tension cracks while fine roots slip out, the effect discussed in this study on root reinforcement modeling is negligible when coarse-root diameter classes are represented. Our

  11. [Dimensional fractal of post-paddy wheat root architecture].

    PubMed

    Chen, Xin-xin; Ding, Qi-shuo; Li, Yi-nian; Xue, Jin-lin; Lu, Ming-zhou; Qiu, Wei

    2015-06-01

    To evaluate whether crop rooting system was directionally dependent, a field digitizer was used to measure post-paddy wheat root architectures. The acquired data was transferred to Pro-E, in which virtual root architecture was reconstructed and projected to a series of planes each separated in 10° apart. Fractal dimension and fractal abundance of root projections in all the 18 planes were calculated, revealing a distinctive architectural distribution of wheat root in each direction. This strongly proved that post-paddy wheat root architecture was directionally dependent. From seedling to turning green stage, fractal dimension of the 18 projections fluctuated significantly, illustrating a dynamical root developing process in the period. At the jointing stage, however, fractal indices of wheat root architecture resumed its regularity in each dimension. This wheat root architecture recovered its dimensional distinctness. The proposed method was applicable for precision modeling field state root distribution in soil.

  12. Triterpene and Flavonoid Biosynthesis and Metabolic Profiling of Hairy Roots, Adventitious Roots, and Seedling Roots of Astragalus membranaceus.

    PubMed

    Park, Yun Ji; Thwe, Aye Aye; Li, Xiaohua; Kim, Yeon Jeong; Kim, Jae Kwang; Arasu, Mariadhas Valan; Al-Dhabi, Naif Abdullah; Park, Sang Un

    2015-10-14

    Astragalus membranaceus is an important traditional Chinese herb with various medical applications. Astragalosides (ASTs), calycosin, and calycosin-7-O-β-d-glucoside (CG) are the primary metabolic components in A. membranaceus roots. The dried roots of A. membranaceus have various medicinal properties. The present study aimed to investigate the expression levels of genes related to the biosynthetic pathways of ASTs, calycosin, and CG to investigate the differences between seedling roots (SRs), adventitious roots (ARs), and hairy roots (HRs) using quantitative real-time polymerase chain reaction (qRT-PCR). qRT-PCR study revealed that the transcription level of genes involved in the AST biosynthetic pathway was lowest in ARs and showed similar patterns in HRs and SRs. Moreover, most genes involved in the synthesis of calycosin and CG exhibited the highest expression levels in SRs. High-performance liquid chromatography (HPLC) analysis indicated that the expression level of the genes correlated with the content of ASTs, calycosin, and CG in the three different types of roots. ASTs were the most abundant in SRs. CG accumulation was greater than calycosin accumulation in ARs and HRs, whereas the opposite was true in SRs. Additionally, 40 metabolites were identified using gas chromatography-time-of-flight mass spectrometry (GC-TOF-MS). Principal component analysis (PCA) documented the differences among SRs, ARs, and HRs. PCA comparatively differentiated among the three samples. The results of PCA showed that HRs were distinct from ARs and SRs on the basis of the dominant amounts of sugars and clusters derived from closely similar biochemical pathways. Also, ARs had a higher concentration of phenylalanine, a precursor for the phenylpropanoid biosynthetic pathway, as well as CG. TCA cycle intermediates levels including succinic acid and citric acid indicated a higher amount in SRs than in the others.

  13. Root system markup language: toward a unified root architecture description language.

    PubMed

    Lobet, Guillaume; Pound, Michael P; Diener, Julien; Pradal, Christophe; Draye, Xavier; Godin, Christophe; Javaux, Mathieu; Leitner, Daniel; Meunier, Félicien; Nacry, Philippe; Pridmore, Tony P; Schnepf, Andrea

    2015-03-01

    The number of image analysis tools supporting the extraction of architectural features of root systems has increased in recent years. These tools offer a handy set of complementary facilities, yet it is widely accepted that none of these software tools is able to extract in an efficient way the growing array of static and dynamic features for different types of images and species. We describe the Root System Markup Language (RSML), which has been designed to overcome two major challenges: (1) to enable portability of root architecture data between different software tools in an easy and interoperable manner, allowing seamless collaborative work; and (2) to provide a standard format upon which to base central repositories that will soon arise following the expanding worldwide root phenotyping effort. RSML follows the XML standard to store two- or three-dimensional image metadata, plant and root properties and geometries, continuous functions along individual root paths, and a suite of annotations at the image, plant, or root scale at one or several time points. Plant ontologies are used to describe botanical entities that are relevant at the scale of root system architecture. An XML schema describes the features and constraints of RSML, and open-source packages have been developed in several languages (R, Excel, Java, Python, and C#) to enable researchers to integrate RSML files into popular research workflow. PMID:25614065

  14. Effect of root canal preparation, type of endodontic post and mechanical cycling on root fracture strength

    PubMed Central

    RIPPE, Marília Pivetta; SANTINI, Manuela Favarin; BIER, Carlos Alexandre Souza; BALDISSARA, Paolo; VALANDRO, Luiz Felipe

    2014-01-01

    Objective To evaluate the impact of the type of root canal preparation, intraradicular post and mechanical cycling on the fracture strength of roots. Material and Methods eighty human single rooted teeth were divided into 8 groups according to the instruments used for root canal preparation (manual or rotary instruments), the type of intraradicular post (fiber posts- FRC and cast post and core- CPC) and the use of mechanical cycling (MC) as follows: Manual and FRC; Manual, FRC and MC; Manual and CPC; Manual, CPC and MC; Rotary and FRC; Rotary, FRC and MC; Rotary and CPC; Rotary, CPC and MC. The filling was performed by lateral compactation. All root canals were prepared for a post with a 10 mm length, using the custom #2 bur of the glass fiber post system. For mechanical cycling, the protocol was applied as follows: an angle of incidence of 45°, 37°C, 88 N, 4 Hz, 2 million pulses. All groups were submitted to fracture strength test in a 45° device with 1 mm/ min cross-head speed until failure occurred. Results The 3-way ANOVA showed that the root canal preparation strategy (p<0.03) and post type (p<0.0001) affected the fracture strength results, while mechanical cycling (p=0.29) did not. Conclusion The root canal preparation strategy only influenced the root fracture strength when restoring with a fiber post and mechanical cycling, so it does not seem to be an important factor in this scenario. PMID:25025556

  15. White lupin cluster root acclimation to phosphorus deficiency and root hair development involve unique glycerophosphodiester phosphodiesterases

    Technology Transfer Automated Retrieval System (TEKTRAN)

    White lupin (Lupinus albus L.) is a phosphate (Pi) deficiency tolerant legume which develops short, densely clustered tertiary lateral roots (cluster/proteoid roots) in response to Pi limitation. In this report we characterize two glycerophosphodiester phosphodiesterase (GPX-PDE) genes (GPX-PDE1 and...

  16. Identification of coniferous fine roots to species using ribosomal PCR products of pooled root samples

    EPA Science Inventory

    Background/Question/Methods To inform an individual-based forest stand model emphasizing belowground competition, we explored the potential of using the relative abundances of ribosomal PCR products from pooled and milled roots, to allocate total root biomass to each of the thre...

  17. Occlusion regulates tooth-root elongation during root development in rat molars.

    PubMed

    Nakasone, Naohiro; Yoshie, Hiromasa

    2011-12-01

    Occlusion is commenced by contact of a tooth with an opposing tooth and is the mechanical force working against the periodontal ligament (PDL). However, the influences of occlusion during root development remain uncertain. By extracting the unerupted counterpart molars of rats, we established a non-occlusal model that directly examined the effects of the absence of occlusion in developing molars using micro-computed tomography (μ-CT) and histological procedures. The μ-CT data for experimental molars confirmed no attrition and hypogenesis of the alveolar bone. Root lengths in experimental groups increased more than in control groups. Histological findings of experimental molars showed a wide crown pulp, a long and narrow root, immature Sharpey's fibers, and hypogenesis of cementum. Proliferating cells localized in Hertwig's epithelial root sheath (HERS), the apical pulp, and the PDL of experimental teeth. Furthermore, cell-proliferative activity in experimental roots exceeded that in normal roots. These data indicate that cell proliferation is decreased by occlusion during root formation. Thus, occlusion is one factor that regulates root elongation.

  18. Correlation of Pectin Methylesterase Activity in Root Caps of Pea with Root Border Cell Separation.

    PubMed Central

    Stephenson, M. B.; Hawes, M. C.

    1994-01-01

    We tested predictions of the hypothesis that pectin methylesterase in the root cap plays a role in cell wall solubilization leading to separation of root border cells from the root tip. Root cap pectin methylesterase activity was detected only in species that release large numbers of border cells daily. In pea (Pisum sativum) root caps, enzyme activity is correlated with border cell separation during development: 6-fold more activity occurs during border cell separation than after cell separation is complete. Higher levels of enzyme activity are restored by experimental induction of border cell separation. A corresponding increase in transcription of a gene encoding root cap pectin methylesterase precedes the increase in enzyme activity. A dramatic increase in the level of soluble, de-esterified pectin in the root tip also is correlated with pectin methylesterase activity during border cell development. This increase in acidic, de-esterified pectin during development occurs in parallel with a decrease in cell wall/apoplastic pH of cells in the periphery of the root cap. PMID:12232366

  19. Roots Withstanding their Environment: Exploiting Root System Architecture Responses to Abiotic Stress to Improve Crop Tolerance

    PubMed Central

    Koevoets, Iko T.; Venema, Jan Henk; Elzenga, J. Theo. M.; Testerink, Christa

    2016-01-01

    To face future challenges in crop production dictated by global climate changes, breeders and plant researchers collaborate to develop productive crops that are able to withstand a wide range of biotic and abiotic stresses. However, crop selection is often focused on shoot performance alone, as observation of root properties is more complex and asks for artificial and extensive phenotyping platforms. In addition, most root research focuses on development, while a direct link to the functionality of plasticity in root development for tolerance is often lacking. In this paper we review the currently known root system architecture (RSA) responses in Arabidopsis and a number of crop species to a range of abiotic stresses, including nutrient limitation, drought, salinity, flooding, and extreme temperatures. For each of these stresses, the key molecular and cellular mechanisms underlying the RSA response are highlighted. To explore the relevance for crop selection, we especially review and discuss studies linking root architectural responses to stress tolerance. This will provide a first step toward understanding the relevance of adaptive root development for a plant’s response to its environment. We suggest that functional evidence on the role of root plasticity will support breeders in their efforts to include root properties in their current selection pipeline for abiotic stress tolerance, aimed to improve the robustness of crops.

  20. Roots Withstanding their Environment: Exploiting Root System Architecture Responses to Abiotic Stress to Improve Crop Tolerance.

    PubMed

    Koevoets, Iko T; Venema, Jan Henk; Elzenga, J Theo M; Testerink, Christa

    2016-01-01

    To face future challenges in crop production dictated by global climate changes, breeders and plant researchers collaborate to develop productive crops that are able to withstand a wide range of biotic and abiotic stresses. However, crop selection is often focused on shoot performance alone, as observation of root properties is more complex and asks for artificial and extensive phenotyping platforms. In addition, most root research focuses on development, while a direct link to the functionality of plasticity in root development for tolerance is often lacking. In this paper we review the currently known root system architecture (RSA) responses in Arabidopsis and a number of crop species to a range of abiotic stresses, including nutrient limitation, drought, salinity, flooding, and extreme temperatures. For each of these stresses, the key molecular and cellular mechanisms underlying the RSA response are highlighted. To explore the relevance for crop selection, we especially review and discuss studies linking root architectural responses to stress tolerance. This will provide a first step toward understanding the relevance of adaptive root development for a plant's response to its environment. We suggest that functional evidence on the role of root plasticity will support breeders in their efforts to include root properties in their current selection pipeline for abiotic stress tolerance, aimed to improve the robustness of crops. PMID:27630659

  1. Root System Markup Language: Toward a Unified Root Architecture Description Language1[OPEN

    PubMed Central

    Pound, Michael P.; Pradal, Christophe; Draye, Xavier; Godin, Christophe; Leitner, Daniel; Meunier, Félicien; Pridmore, Tony P.; Schnepf, Andrea

    2015-01-01

    The number of image analysis tools supporting the extraction of architectural features of root systems has increased in recent years. These tools offer a handy set of complementary facilities, yet it is widely accepted that none of these software tools is able to extract in an efficient way the growing array of static and dynamic features for different types of images and species. We describe the Root System Markup Language (RSML), which has been designed to overcome two major challenges: (1) to enable portability of root architecture data between different software tools in an easy and interoperable manner, allowing seamless collaborative work; and (2) to provide a standard format upon which to base central repositories that will soon arise following the expanding worldwide root phenotyping effort. RSML follows the XML standard to store two- or three-dimensional image metadata, plant and root properties and geometries, continuous functions along individual root paths, and a suite of annotations at the image, plant, or root scale at one or several time points. Plant ontologies are used to describe botanical entities that are relevant at the scale of root system architecture. An XML schema describes the features and constraints of RSML, and open-source packages have been developed in several languages (R, Excel, Java, Python, and C#) to enable researchers to integrate RSML files into popular research workflow. PMID:25614065

  2. Characterization of Root Surface and Endorhizosphere Pseudomonads in Relation to Their Colonization of Roots

    PubMed Central

    van Peer, Ron; Punte, Helma L. M.; de Weger, Letty A.; Schippers, Bob

    1990-01-01

    An extensive colonization of the endorhizosphere by fluorescent pseudomonads was observed in tomato plants grown on artificial substrates. These studies reveal that a significantly higher percentage of pseudomonads obtained from the endorhizosphere (30%) reduced plant growth than those obtained from the root surface (4%). Lipopolysaccharide patterns, cell envelope protein patterns, and other biochemical characteristics indicated that Pseudomonas isolates obtained from the endorhizosphere are distinct from Pseudomonas isolates obtained from the root surface. Isolates from the endorhizosphere especially were able to recolonize the endorhizosphere of both sterile and nonsterile tomato roots. The ability of the endorhizosphere isolates to colonize the endorhizosphere significantly correlated with their agglutination by tomato root agglutinin but did not correlate with chemotaxis to seed exudates of tomato. No correlation between colonization of the endorhizosphere and agglutination by root agglutinin could be demonstrated for the root surface isolates. We propose that agglutination of specific Pseudomonas strains by root agglutinin is of importance in the initial phase of adherence of bacteria to the root surface. Images PMID:16348258

  3. Deep rooting conferred by DEEPER ROOTING 1 enhances rice yield in paddy fields

    PubMed Central

    Arai-Sanoh, Yumiko; Takai, Toshiyuki; Yoshinaga, Satoshi; Nakano, Hiroshi; Kojima, Mikiko; Sakakibara, Hitoshi; Kondo, Motohiko; Uga, Yusaku

    2014-01-01

    To clarify the effect of deep rooting on grain yield in rice (Oryza sativa L.) in an irrigated paddy field with or without fertilizer, we used the shallow-rooting IR64 and the deep-rooting Dro1-NIL (a near-isogenic line homozygous for the Kinandang Patong allele of DEEPER ROOTING 1 (DRO1) in the IR64 genetic background). Although total root length was similar in both lines, more roots were distributed within the lower soil layer of the paddy field in Dro1-NIL than in IR64, irrespective of fertilizer treatment. At maturity, Dro1-NIL showed approximately 10% higher grain yield than IR64, irrespective of fertilizer treatment. Higher grain yield of Dro1-NIL was mainly due to the increased 1000-kernel weight and increased percentage of ripened grains, which resulted in a higher harvest index. After heading, the uptake of nitrogen from soil and leaf nitrogen concentration were higher in Dro1-NIL than in IR64. At the mid-grain-filling stage, Dro1-NIL maintained higher cytokinin fluxes from roots to shoots than IR64. These results suggest that deep rooting by DRO1 enhances nitrogen uptake and cytokinin fluxes at late stages, resulting in better grain filling in Dro1-NIL in a paddy field in this study. PMID:24988911

  4. Roots Withstanding their Environment: Exploiting Root System Architecture Responses to Abiotic Stress to Improve Crop Tolerance

    PubMed Central

    Koevoets, Iko T.; Venema, Jan Henk; Elzenga, J. Theo. M.; Testerink, Christa

    2016-01-01

    To face future challenges in crop production dictated by global climate changes, breeders and plant researchers collaborate to develop productive crops that are able to withstand a wide range of biotic and abiotic stresses. However, crop selection is often focused on shoot performance alone, as observation of root properties is more complex and asks for artificial and extensive phenotyping platforms. In addition, most root research focuses on development, while a direct link to the functionality of plasticity in root development for tolerance is often lacking. In this paper we review the currently known root system architecture (RSA) responses in Arabidopsis and a number of crop species to a range of abiotic stresses, including nutrient limitation, drought, salinity, flooding, and extreme temperatures. For each of these stresses, the key molecular and cellular mechanisms underlying the RSA response are highlighted. To explore the relevance for crop selection, we especially review and discuss studies linking root architectural responses to stress tolerance. This will provide a first step toward understanding the relevance of adaptive root development for a plant’s response to its environment. We suggest that functional evidence on the role of root plasticity will support breeders in their efforts to include root properties in their current selection pipeline for abiotic stress tolerance, aimed to improve the robustness of crops. PMID:27630659

  5. The root as a drill: an ethylene-auxin interaction facilitates root penetration in soil.

    PubMed

    Santisree, Parankusam; Nongmaithem, Sapana; Sreelakshmi, Yellamaraju; Ivanchenko, Maria; Sharma, Rameshwar

    2012-02-01

    Plant roots forage the soil for water and nutrients and overcome the soil's physical compactness. Roots are endowed with a mechanism that allows them to penetrate and grow in dense media such as soil. However, the molecular mechanisms underlying this process are still poorly understood. The nature of the media in which roots grow adds to the difficulty to in situ analyze the mechanisms underlying root penetration. Inhibition of ethylene perception by application of 1-methyl cyclopropene (1-MCP) to tomato seedlings nearly abolished the root penetration in Soilrite. The reversal of this process by auxin indicated operation of an auxin-ethylene signaling pathway in the regulation of root penetration. The tomato pct1-2 mutant that exhibits an enhanced polar transport of auxin required higher doses of 1-MCP to inhibit root penetration, indicating a pivotal role of auxin transport in this process. In this update we provide a brief review of our current understanding of molecular processes underlying root penetration in higher plants.

  6. Root system markup language: toward a unified root architecture description language.

    PubMed

    Lobet, Guillaume; Pound, Michael P; Diener, Julien; Pradal, Christophe; Draye, Xavier; Godin, Christophe; Javaux, Mathieu; Leitner, Daniel; Meunier, Félicien; Nacry, Philippe; Pridmore, Tony P; Schnepf, Andrea

    2015-03-01

    The number of image analysis tools supporting the extraction of architectural features of root systems has increased in recent years. These tools offer a handy set of complementary facilities, yet it is widely accepted that none of these software tools is able to extract in an efficient way the growing array of static and dynamic features for different types of images and species. We describe the Root System Markup Language (RSML), which has been designed to overcome two major challenges: (1) to enable portability of root architecture data between different software tools in an easy and interoperable manner, allowing seamless collaborative work; and (2) to provide a standard format upon which to base central repositories that will soon arise following the expanding worldwide root phenotyping effort. RSML follows the XML standard to store two- or three-dimensional image metadata, plant and root properties and geometries, continuous functions along individual root paths, and a suite of annotations at the image, plant, or root scale at one or several time points. Plant ontologies are used to describe botanical entities that are relevant at the scale of root system architecture. An XML schema describes the features and constraints of RSML, and open-source packages have been developed in several languages (R, Excel, Java, Python, and C#) to enable researchers to integrate RSML files into popular research workflow.

  7. Chemical hydrophobicity and uptake by plant roots.

    PubMed

    Dettenmaier, Erik M; Doucette, William J; Bugbee, Bruce

    2009-01-15

    The transpiration stream concentration factor (TSCF), the ratio between a compound's concentration in the xylem to that in the solution adjacent to the roots, is commonly used to describe the relative ability of an organic compound to be passively transported from root to shoot. Widely cited bell-shaped curves relating TSCFto the octanol/water partition coefficient (log Kow) imply that significant root uptake and transfer into shoot tissues occurs only for compounds falling within an intermediate hydrophobicity range. However, recent laboratory and field data for relatively water soluble compounds such as sulfolane, methyl tert-butyl ether (MTBE), and 1,4-dioxane suggest that these relationships are not universally applicable, especiallyfor nonionizable, highly polar, water soluble organics. To re-evaluate the relationship between root uptake and chemical hydrophobicity, TSCFs were measured for 25 organic chemicals ranging in log Kow from -0.8 to 5 using a pressure chamber technique. Using the TSCF values measured in this study, a new empirical relationship between TSCF (0 and 1) and log Kow (-0.8 to 5) is presented that indicates that nonionizable, polar, highly water soluble organic compounds are most likely to be taken up by plant roots and translocated to shoot tissue.

  8. an evaluation of techniques for root observations

    NASA Astrophysics Data System (ADS)

    Mohamed, Awaz; Monnier, Yogan; Stokes, Alexia

    2015-04-01

    An evaluation of techniques for root observations Below-ground processes play an essential role in ecosystem nutrient cycling and the global carbon budget (C) cycle because they regulate storage of large quantities of carbon. Quantifying root dynamics, that is, production, longevity, mortality and decomposition, is crucial to the understanding of ecosystem structure and function, and in predicting how ecosystems respond to climate variability. The necessity for accumulating information about root system growth is thus clear. However, we have a relatively poor understanding of the best method of observation, especially in the natural soil environment. The objective of this study is to compare four techniques of root observation, that is, manual scanner, smartphone scanner, flatbed scanner and classical observations, for determining the best technique. Root growth dynamics were measured in Rhizotrons. The project involves several field-sites situated in agroforests comprising hybrid walnut trees and pasture/crops along a climatic gradient in France. The results of this project will provide data allowing researchers to facilitate the choice of the most suitable observation method for their research.

  9. New nitrogen uptake strategy: specialized snow roots.

    PubMed

    Onipchenko, Vladimir G; Makarov, Mikhail I; van Logtestijn, Richard S P; Ivanov, Viktor B; Akhmetzhanova, Assem A; Tekeev, Dzhamal K; Ermak, Anton A; Salpagarova, Fatima S; Kozhevnikova, Anna D; Cornelissen, Johannes H C

    2009-08-01

    The evolution of plants has yielded a wealth of adaptations for the acquisition of key mineral nutrients. These include the structure, physiology and positioning of root systems. We report the discovery of specialized snow roots as a plant strategy to cope with the very short season for nutrient uptake and growth in alpine snow-beds, i.e. patches in the landscape that remain snow-covered well into the summer. We provide anatomical, chemical and experimental (15)N isotope tracking evidence that the Caucasian snow-bed plant Corydalis conorhiza forms extensive networks of specialized above-ground roots, which grow against gravity to acquire nitrogen directly from within snow packs. Snow roots capture nitrogen that would otherwise partly run off down-slope over a frozen surface, thereby helping to nourish these alpine ecosystems. Climate warming is changing and will change mountain snow regimes, while large-scale anthropogenic N deposition has increased snow N contents. These global changes are likely to impact on the distribution, abundance and functional significance of snow roots.

  10. Distribution of expansins in graviresponding maize roots

    NASA Technical Reports Server (NTRS)

    Zhang, N.; Hasenstein, K. H.

    2000-01-01

    To test if expansins, wall loosening proteins that disrupt binding between microfibrils and cell wall matrix, participate in the differential elongation of graviresponding roots, Zea mays L. cv. Merit roots were gravistimulated and used for immunolocalization with anti-expansin. Western blots showed cross-reaction with two proteins of maize, one of the same mass as cucumber expansin (29 kDa), the second slightly larger (32 kDa). Maize roots contained mainly the larger protein, but both were found in coleoptiles. The expansin distribution in cucumber roots and hypocotyls was similar to the distribution in maize. Roots showed stronger expansin signals on the expanding convex side than the concave flank as early as 30 min after gravistimulation. Treatment with brefeldin A, a vesicle transport inhibitor, or the auxin transport inhibitor, naphthylphthalamic acid, showed delayed graviresponse and the appearance of differential staining. Our results indicate that expansins may be transported and secreted to cell walls via vesicles and function in wall expansion.

  11. Distribution of expansins in graviresponding maize roots.

    PubMed

    Zhang, N; Hasenstein, K H

    2000-12-01

    To test if expansins, wall loosening proteins that disrupt binding between microfibrils and cell wall matrix, participate in the differential elongation of graviresponding roots, Zea mays L. cv. Merit roots were gravistimulated and used for immunolocalization with anti-expansin. Western blots showed cross-reaction with two proteins of maize, one of the same mass as cucumber expansin (29 kDa), the second slightly larger (32 kDa). Maize roots contained mainly the larger protein, but both were found in coleoptiles. The expansin distribution in cucumber roots and hypocotyls was similar to the distribution in maize. Roots showed stronger expansin signals on the expanding convex side than the concave flank as early as 30 min after gravistimulation. Treatment with brefeldin A, a vesicle transport inhibitor, or the auxin transport inhibitor, naphthylphthalamic acid, showed delayed graviresponse and the appearance of differential staining. Our results indicate that expansins may be transported and secreted to cell walls via vesicles and function in wall expansion. PMID:11134415

  12. Visualizing Rhizosphere Soil Structure Around Living Roots

    NASA Astrophysics Data System (ADS)

    Menon, M.; Berli, M.; Ghezzehei, T. A.; Nico, P.; Young, M. H.; Tyler, S. W.

    2008-12-01

    The rhizosphere, a thin layer of soil (0 to 2 mm) surrounding a living root, is an important interface between bulk soil and plant root and plays a critical role in root water and nutrient uptake. In this study, we used X-ray Computerized Microtomography (microCT) to visualize soil structure around living roots non-destructively and with high spatial resolution. Four different plant species (Helianthus annuus, Lupinus hartwegii, Vigna radiata and Phaseolus lunatus), grown in four different porous materials (glass beads, medium and coarse sand, loam aggregates), were scanned with 10 ìm spatial resolution, using the microtomography beamline 8.3.2 at the Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, CA. Sample cross section images clearly show contacts between roots and soil particles, connecting water films, air-water interfaces as well as some cellular features of the plants taproots. We found with a simulation experiment, inflating a cylindrical micro-balloon in a pack of air-dry loam aggregates, that soil fracturing rather than compaction might occur around a taproot growing in dry soil. Form these preliminary experiments, we concluded that microCT has potential as a tool for a more process-based understanding of the role of rhizosphere soil structure on soil fertility, plant growth and the water balance at the earth-atmosphere interface.

  13. Chronic nerve root entrapment: compression and degeneration

    NASA Astrophysics Data System (ADS)

    Vanhoestenberghe, A.

    2013-02-01

    Electrode mounts are being developed to improve electrical stimulation and recording. Some are tight-fitting, or even re-shape the nervous structure they interact with, for a more selective, fascicular, access. If these are to be successfully used chronically with human nerve roots, we need to know more about the possible damage caused by the long-term entrapment and possible compression of the roots following electrode implantation. As there are, to date, no such data published, this paper presents a review of the relevant literature on alternative causes of nerve root compression, and a discussion of the degeneration mechanisms observed. A chronic compression below 40 mmHg would not compromise the functionality of the root as far as electrical stimulation and recording applications are concerned. Additionally, any temporary increase in pressure, due for example to post-operative swelling, should be limited to 20 mmHg below the patient’s mean arterial pressure, with a maximum of 100 mmHg. Connective tissue growth may cause a slower, but sustained, pressure increase. Therefore, mounts large enough to accommodate the root initially without compressing it, or compliant, elastic, mounts, that may stretch to free a larger cross-sectional area in the weeks after implantation, are recommended.

  14. Organochlorine (chlordecone) uptake by root vegetables.

    PubMed

    Florence, Clostre; Philippe, Letourmy; Magalie, Lesueur-Jannoyer

    2015-01-01

    Chlordecone, an organochlorine insecticide, continues to pollute soils in the French West Indies. The main source of human exposure to this pollutant is food. Root vegetables, which are staple foods in tropical regions, can be highly contaminated and are thus a very effective lever for action to reduce consumer exposure. We analyzed chlordecone contamination in three root vegetables, yam, dasheen and sweet potato, which are among the main sources of chlordecone exposure in food in the French West Indies. All soil types do not have the same potential for the contamination of root vegetables, allophanic andosols being two to ten times less contaminating than non-allophanic nitisols and ferralsols. This difference was only partially explained by the higher OC content in allophanic soils. Dasheen corms were shown to accumulate more chlordecone than yam and sweet potato tubers. The physiological nature of the root vegetable may explain this difference. Our results are in good agreement with the hypothesis that chlordecone uptake by root vegetables is based on passive and diffusive processes and limited by transport and dilution during growth.

  15. How tree roots respond to drought

    PubMed Central

    Brunner, Ivano; Herzog, Claude; Dawes, Melissa A.; Arend, Matthias; Sperisen, Christoph

    2015-01-01

    The ongoing climate change is characterized by increased temperatures and altered precipitation patterns. In addition, there has been an increase in both the frequency and intensity of extreme climatic events such as drought. Episodes of drought induce a series of interconnected effects, all of which have the potential to alter the carbon balance of forest ecosystems profoundly at different scales of plant organization and ecosystem functioning. During recent years, considerable progress has been made in the understanding of how aboveground parts of trees respond to drought and how these responses affect carbon assimilation. In contrast, processes of belowground parts are relatively underrepresented in research on climate change. In this review, we describe current knowledge about responses of tree roots to drought. Tree roots are capable of responding to drought through a variety of strategies that enable them to avoid and tolerate stress. Responses include root biomass adjustments, anatomical alterations, and physiological acclimations. The molecular mechanisms underlying these responses are characterized to some extent, and involve stress signaling and the induction of numerous genes, leading to the activation of tolerance pathways. In addition, mycorrhizas seem to play important protective roles. The current knowledge compiled in this review supports the view that tree roots are well equipped to withstand drought situations and maintain morphological and physiological functions as long as possible. Further, the reviewed literature demonstrates the important role of tree roots in the functioning of forest ecosystems and highlights the need for more research in this emerging field. PMID:26284083

  16. Protein synthesis in geostimulated root caps

    NASA Technical Reports Server (NTRS)

    Feldman, L. J.

    1982-01-01

    A study is presented of the processes occurring in the root cap of corn which are requisite for the formation of root cap inhibitor and which can be triggered or modulated by both light and gravity. The results of this study indicate the importance of protein synthesis for light-induced gravitropic bending in roots. Root caps in which protein synthesis is prevented are unable to induce downward bending. This suggests that light acts by stimulating proteins which are necessary for the translation of the gravitropic stimulus into a growth response (downward bending). The turnover of protein with time was also examined in order to determine whether light acts by stimulating the synthesis of unique proteins required for downward growth. It is found that auxin in combination with light allows for the translation of the gravitropic stimulus into a growth response at least in part through the modification of protein synthesis. It is concluded that unique proteins are stimulated by light and are involved in promoting the downward growth in roots which are responding to gravity.

  17. Imaging tree root systems in situ

    NASA Astrophysics Data System (ADS)

    Wielopolski, Lucian; Hendrey, George; Daniels, Jeffrey J.; McGuigan, Michael

    2000-04-01

    Predictions of global energy use in this century suggest a continued increase in carbon emissions and rising concentrations of carbon dioxide (CO2) in the atmosphere. This represents a serious environmental problem and contributes significantly to greenhouse gases that affect global warming. Terrestrial ecosystems are a huge natural biological scrubber for CO2 currently sequestering, directly from the atmosphere, about 25% (approximately 2 GtC) of the 7.4 Gt of anthropogenic carbon emitted annually into the atmosphere. The major carbon pathways into soil are through plant litter and roots. Presently, there are no means by which root morphology, distribution, and mass can be measured without serious sampling artifacts that alter these properties. The current methods are destructive and labor intensive. Preliminary results using a high frequency, 1.5 Ghz, impulse Ground Penetrating Radar (GPR) for nondestructive imaging of tree root systems in situ are presented. The 3D reconstructed image is used to assess root morphology and dimensions. The constraints, limitations, and potential solutions for using GPR for tree root systems imaging and analysis are discussed.

  18. Differences in U root-to-shoot translocation between plant species explained by U distribution in roots.

    PubMed

    Straczek, Anne; Duquene, Lise; Wegrzynek, Dariusz; Chinea-Cano, Ernesto; Wannijn, Jean; Navez, Jacques; Vandenhove, Hildegarde

    2010-03-01

    Accumulation and distribution of uranium in roots and shoots of four plants species differing in their cation exchange capacity of roots (CECR) was investigated. After exposure in hydroponics for seven days to 100 micromol U L(-1), distribution of uranium in roots was investigated through chemical extraction of roots. Higher U concentrations were measured in roots of dicots which showed a higher CECR than monocot species. Chemical extractions indicated that uranium is mostly located in the apoplasm of roots of monocots but that it is predominantly located in the symplasm of roots of dicots. Translocation of U to shoot was not significantly affected by the CECR or distribution of U between symplasm and apoplasm. Distribution of uranium in roots was investigated through chemical extraction of roots for all species. Additionally, longitudinal and radial distribution of U in roots of maize and Indian mustard, respectively showing the lowest and the highest translocation, was studied following X-ray fluorescence (XRF) analysis of specific root sections. Chemical analysis and XRF analysis of roots of maize and Indian mustard clearly indicated a higher longitudinal and radial transport of uranium in roots of Indian mustard than in roots of maize, where uranium mostly accumulated in root tips. These results showed that even if CECR could partly explain U accumulation in roots, other mechanisms like radial and longitudinal transport are implied in the translocation of U to the shoot. PMID:20080323

  19. Variations in the Root Form and Root Canal Morphology of Permanent Mandibular First Molars in a Sri Lankan Population

    PubMed Central

    Peiris, Roshan; Malwatte, Uthpala; Abayakoon, Janak; Wettasinghe, Anuradha

    2015-01-01

    The present study was conducted to determine the number of roots and morphology of the root canal system of permanent mandibular first molars (M1) in a Sri Lankan population. Sample of 529 M1 teeth was used. The number of roots was examined and the lengths of the mesial and distal roots were measured to the nearest 0.01 mm. Vacuum injection protocol was used to inject China ink into the root canal system, making it transparent. Root canal morphology was recorded using Vertucci's classification. Presence of furcation canals, position of lateral canals, intercanal communications, level of bifurcation, and convergence of the root canal system were recorded. M1 showed three roots in 4.1% of the sample. Commonest root canal morphology of the mesial root was type IV and the distal root was type I. The level of bifurcation of the root canals was commonly observed in the cervical one-third of the root while convergence was observed in the apical one-third in both roots. Prevalence of three rooted mandibular first molars is less than 5%. Mesial root showed the most variable canal morphology. Prevalence of furcation canals was 1.5% while that of middle mesial canals was 0.2%. PMID:26351583

  20. Developmental anatomy and branching of roots of four Zeylanidium species (podostemaceae), with implications for evolution of foliose roots.

    PubMed

    Hiyama, Y; Tsukamoto, I; Imaichi, R; Kato, M

    2002-12-01

    Podostemaceae have markedly specialized and diverse roots that are adapted to extreme habitats, such as seasonally submerged or exposed rocks in waterfalls and rapids. This paper describes the developmental anatomy of roots of four species of Zeylanidium, with emphasis on the unusual association between root branching and root-borne adventitious shoots. In Z. subulatum and Z. lichenoides with subcylindrical or ribbon-like roots, the apical meristem distal (exterior) to a shoot that is initiated within the meristem area reduces and loses meristematic activity. This results in a splitting into two meristems that separate the parental root and lateral root (anisotomous dichotomy). In Z. olivaceum with lobed foliose roots, shoots are initiated in the innermost zone of the marginal meristem, and similar, but delayed, meristem reduction usually occurs, producing a parenchyma exterior to shoots located between root lobes. In some extreme cases, due to meristem recovery, root lobing does not occur, so the margin is entire. In Z. maheshwarii with foliose roots, shoots are initiated proximal to the marginal meristem and there is no shoot-root lobe association. Results suggest that during evolution from subcylindrical or ribbon-like roots to foliose roots, reduction of meristem exterior to a shoot was delayed and then arrested as a result of inward shifting of the sites of shoot initiation. The evolutionary reappearance of a protective tissue or root cap in Z. olivaceum and Z. maheshwarii in the Zeylanidium clade is implied, taking into account the reported molecular phylogeny and root-cap development in Hydrobryum.

  1. Root-soil air gap and resistance to water flow at the soil-root interface of Robinia pseudoacacia.

    PubMed

    Liu, X P; Zhang, W J; Wang, X Y; Cai, Y J; Chang, J G

    2015-12-01

    During periods of water deficit, growing roots may shrink, retaining only partial contact with the soil. In this study, known mathematical models were used to calculate the root-soil air gap and water flow resistance at the soil-root interface, respectively, of Robinia pseudoacacia L. under different water conditions. Using a digital camera, the root-soil air gap of R. pseudoacacia was investigated in a root growth chamber; this root-soil air gap and the model-inferred water flow resistance at the soil-root interface were compared with predictions based on a separate outdoor experiment. The results indicated progressively greater root shrinkage and loss of root-soil contact with decreasing soil water potential. The average widths of the root-soil air gap for R. pseudoacacia in open fields and in the root growth chamber were 0.24 and 0.39 mm, respectively. The resistance to water flow at the soil-root interface in both environments increased with decreasing soil water potential. Stepwise regression analysis demonstrated that soil water potential and soil temperature were the best predictors of variation in the root-soil air gap. A combination of soil water potential, soil temperature, root-air water potential difference and soil-root water potential difference best predicted the resistance to water flow at the soil-root interface.

  2. Variability of Root Traits in Spring Wheat Germplasm

    PubMed Central

    Narayanan, Sruthi; Mohan, Amita; Gill, Kulvinder S.; Prasad, P. V. Vara

    2014-01-01

    Root traits influence the amount of water and nutrient absorption, and are important for maintaining crop yield under drought conditions. The objectives of this research were to characterize variability of root traits among spring wheat genotypes and determine whether root traits are related to shoot traits (plant height, tiller number per plant, shoot dry weight, and coleoptile length), regions of origin, and market classes. Plants were grown in 150-cm columns for 61 days in a greenhouse under optimal growth conditions. Rooting depth, root dry weight, root: shoot ratio, and shoot traits were determined for 297 genotypes of the germplasm, Cultivated Wheat Collection (CWC). The remaining root traits such as total root length and surface area were measured for a subset of 30 genotypes selected based on rooting depth. Significant genetic variability was observed for root traits among spring wheat genotypes in CWC germplasm or its subset. Genotypes Sonora and Currawa were ranked high, and genotype Vandal was ranked low for most root traits. A positive relationship (R2≥0.35) was found between root and shoot dry weights within the CWC germplasm and between total root surface area and tiller number; total root surface area and shoot dry weight; and total root length and coleoptile length within the subset. No correlations were found between plant height and most root traits within the CWC germplasm or its subset. Region of origin had significant impact on rooting depth in the CWC germplasm. Wheat genotypes collected from Australia, Mediterranean, and west Asia had greater rooting depth than those from south Asia, Latin America, Mexico, and Canada. Soft wheat had greater rooting depth than hard wheat in the CWC germplasm. The genetic variability identified in this research for root traits can be exploited to improve drought tolerance and/or resource capture in wheat. PMID:24945438

  3. Analysis of peptide uptake and location of root hair-promoting peptide accumulation in plant roots.

    PubMed

    Matsumiya, Yoshiki; Taniguchi, Rikiya; Kubo, Motoki

    2012-03-01

    Peptide uptake by plant roots from degraded soybean-meal products was analyzed in Brassica rapa and Solanum lycopersicum. B. rapa absorbed about 40% of the initial water volume, whereas peptide concentration was decreased by 75% after 24 h. Analysis by reversed-phase HPLC showed that number of peptides was absorbed by the roots during soaking in degraded soybean-meal products for 24 h. Carboxyfluorescein-labeled root hair-promoting peptide was synthesized, and its localization, movement, and accumulation in roots were investigated. The peptide appeared to be absorbed by root hairs and then moved to trichoblasts. Furthermore, the peptide was moved from trichoblasts to atrichoblasts after 24 h. The peptide was accumulated in epidermal cells, suggesting that the peptide may have a function in both trichoblasts and atrichoblasts.

  4. Root tip-dependent, active riboflavin secretion by Hyoscyamus albus hairy roots under iron deficiency.

    PubMed

    Higa, Ataru; Miyamoto, Erika; ur Rahman, Laiq; Kitamura, Yoshie

    2008-04-01

    Hyoscyamus albus hairy roots with/without an exogenous gene (11 clones) were established by inoculation of Agrobacterium rhizogenes. All clones cultured under iron-deficient condition secreted riboflavin from the root tips into the culture medium and the productivity depended on the number and size of root tips among the clones. A decline of pH was observed before riboflavin production and root development. By studying effects of proton-pump inhibitors, medium acidification with external organic acid, and riboflavin addition upon pH change and riboflavin productivity, we indicate that riboflavin efflux is not directly connected to active pH reduction, and more significantly active riboflavin secretion occurs as a response to an internal requirement in H. albus hairy roots under iron deficiency. PMID:18367404

  5. Endodontic Microsurgical Treatment of a Three-rooted Mandibular First Molar with Separate Distolingual Root: Report of One Case.

    PubMed

    Wang, Han Guo; Xu, Ning; Yu, Qing

    2016-01-01

    The separate distolingual (DL) roots of three-rooted mandibular first molars are thought to be too difficult for performing apical surgery. This article represents microsurgical treatment of a three-rooted mandibular first molar with a separate DL root. The procedure includes incision and flap retraction, osteotomy, apicoectomy, retropreparation and retrofilling of the root canal, using micro instruments, ultrasonic retrotips and mineral trioxide aggregate (MTA) under a dental operating microscope. Two mm in length of apical root resection, 2 mm in depth of root canal retropreparation with a personalised ultrasonic retrotip, and 2 mm in length of retrofilling with MTA are the key points for accomplishment of apical surgery on separate DL roots. The case was followed up for 15 months after surgery. Clinical and radiographic examinations revealed complete healing of periapical tissue. Separate DL roots of three-rooted mandibular first molars can be treated by endodontic microsurgery with modifications from standard protocol. PMID:27622221

  6. Polyprenols in hairy roots of Coluria geoides.

    PubMed

    Skorupińska-Tudek, K; Hung, V S; Olszowska, O; Furmanowa, M; Chojnacki, T; Swiezewska, E

    2000-12-01

    Long-chain polyisoprenoid alcohols built from several up to more than 100 isoprenoid units are common constituents of all living organisms. They were found mostly in plants, bacteria, yeasts and mammalian cells. In vitro hairy root culture of Coluria geoides was obtained from plants transformed with Agrobacterium rhizogenes. Growth was optimal at 0.75% (w/v) glucose and at 22 degrees C. Dry samples of roots were extracted and lipid content was analysed by HPLC. According to our estimation, polyprenols are accumulated in roots of C. geoides cultivated in vitro as a mixture of several prenologues with the dominating prenol composed of 16 isoprenoid units. The content of polyprenols in tissue was approx. 300 microg/g of dry weight.

  7. Vertical root fracture: prevalence, etiology, and diagnosis.

    PubMed

    Haueisen, Helga; Gärtner, Kathrin; Kaiser, Lea; Trohorsch, Dominik; Heidemann, Detlef

    2013-07-01

    A vertical root fracture (VRF) is a frustrating complication that may occur following root canal treatment, and in almost every case leads to the extraction of the affected tooth. This type of fracture is usually diagnosed by secondary symptoms that develop some time after primary treatment, often when prosthodontic restoration has already been completed. The fracture line itself is often not directly visible, and therefore clinical and radiographic signs and symptoms indicate the diagnosis indirectly. Knowledge of the condition and pathogenesis of VRF is required in order to avoid hopeless trials of periodontal and/or endodontic therapy. Several etiologic factors are discussed that make teeth susceptible to VRF, such as the loss of substance due to restorative and endodontic therapy and stress factors associated with root canal debridement, and filling. PMID:23757466

  8. Root Canal Treatment of a Two-Rooted C-Shaped Maxillary First Molar: A Case Report

    PubMed Central

    Paksefat, Sara; Rahimi, Saeed

    2014-01-01

    The most difficult maxillary teeth for endodontic treatment are the maxillary first molars (MFM) due to their complex root canal anatomy. The presence of two roots and C-shaped canals in MFMs has been reported in rare cases. The present case reports root canal treatment of MFM with two roots, where the palatal and buccal roots were joined together in a C-shaped configuration. PMID:25386214

  9. Relationship between Shoot-rooting and Root-sprouting Abilities and the Carbohydrate and Nitrogen Reserves of Mediterranean Dwarf Shrubs

    PubMed Central

    Palacio, Sara; Maestro, Melchor; Montserrat-Martí, Gabriel

    2007-01-01

    Background and Aims This study analysed the differences in nitrogen (N), non-structural carbohydrates (NSC) and biomass allocation to the roots and shoots of 18 species of Mediterranean dwarf shrubs with different shoot-rooting and resprouting abilities. Root N and NSC concentrations of strict root-sprouters and species resprouting from the base of the stems were also compared. Methods Soluble sugars (SS), starch and N concentrations were assessed in roots and shoots. The root : shoot ratio of each species was obtained by thorough root excavations. Cross-species analyses were complemented by phylogenetically independent contrasts (PICs). Key Results Shoot-rooting species showed a preferential allocation of starch to shoots rather than roots as compared with non-shoot-rooting species. Resprouters displayed greater starch concentrations than non-sprouters in both shoots and roots. Trends were maintained after PICs analyses, but differences became weak when root-sprouters versus non-root-sprouters were compared. Within resprouters, strict root-sprouters showed greater root concentrations and a preferential allocation of starch to the roots than stem-sprouters. No differences were found in the root : shoot ratio of species with different rooting and resprouting abilities. Conclusions The shoot-rooting ability of Mediterranean dwarf shrubs seems to depend on the preferential allocation of starch and SS to shoots, though alternative C-sources such as current photosynthates may also be involved. In contrast to plants from other mediterranean areas of the world, the resprouting ability of Mediterranean dwarf shrubs is not related to a preferential allocation of N, NSC and biomass to roots. PMID:17728338

  10. Analysis of gene expression profiles for cell wall modifying proteins and ACC synthases in soybean cyst nematode colonized roots, adventitious rooting hypocotyls, root tips, flooded roots, and IBA and ACC treatment roots

    Technology Transfer Automated Retrieval System (TEKTRAN)

    We hypothesized that soybean cyst nematode (SCN) co-opts a part or all of one or more innate developmental process in soybean to establish its feeding structure, syncytium, in soybean roots. The syncytium in soybean roots is formed in a predominantly lateral direction within the vascular bundle by ...

  11. Root vs pod infection by root-knot nematodes on aflatoxin contamination of peanut.

    PubMed

    Timper, P; Holbrook, C; Wilson, D

    2007-01-01

    Aflatoxins are potent carcinogens produced by some Aspergillus spp. Infection of peanut (Arachis hypogaea) by root-knot nematodes (Meloidogyne arenaria) can lead to an increase in aflatoxin contamination of kernels when the plants are subjected to drought stress during pod maturation. It is not clear whether the increased aflatoxin contamination is primarily due to greater invasion of the galled pods by toxigenic Aspergillus spp. or whether root galling is also involved. Our objective was to determine the contribution of root and pod galling caused by root-knot nematodes to the increase in aflatoxin contamination in peanut. Two greenhouse experiments were conducted in which pods and roots were physically separated. Pod set was restricted to soil-filled pans (41 cm dia. x 10 cm depth), while the roots grew underneath the pan into a pot. The experiments had a factorial arrangement of treatments: pod zone with and without nematodes, and root zone with and without nematodes. In Experiment 1, 5000 eggs of M. arenaria were added to the root zone14 days after planting (DAP) and 8000 eggs were added to the pod zone 60 and 80 DAP. In Experiment 2, 3000 eggs were added to the root zone 30 DAP and 8000 eggs were added to the pod zone every week starting 60 DAP. The four treatment combinations were replicated 10 to 13 times. Conidia of Aspergillus flavus/A. parasiticus was added to the soil surface (pods zone) at mid bloom. Plants were subjected to drought stress 40 days before harvest. In Experiment 1, adding nematodes to the pod zone had no effect on aflatoxin concentrations in the peanut kernel. However, the lack of an effect may have been to due to the low occurrence of galling on the hulls. In pots where nematodes were added to the root zone, 50 to 80% of the root system was galled. Adding nematodes to the root zone increased aflatoxin concentrations in the peanut kernels from 34 ppb in the control to 71 ppb. In Experiment 2, there was heavy pod galling with galls present

  12. Composite Cucurbita pepo plants with transgenic roots as a tool to study root development

    PubMed Central

    Ilina, Elena L.; Logachov, Anton A.; Laplaze, Laurent; Demchenko, Nikolay P.; Pawlowski, Katharina; Demchenko, Kirill N.

    2012-01-01

    Background and Aims In most plant species, initiation of lateral root primordia occurs above the elongation zone. However, in cucurbits and some other species, lateral root primordia initiation and development takes place in the apical meristem of the parental root. Composite transgenic plants obtained by Agrobacterium rhizogenes-mediated transformation are known as a suitable model to study root development. The aim of the present study was to establish this transformation technique for squash. Methods The auxin-responsive promoter DR5 was cloned into the binary vectors pKGW-RR-MGW and pMDC162-GFP. Incorporation of 5-ethynyl-2′-deoxyuridine (EdU) was used to evaluate the presence of DNA-synthesizing cells in the hypocotyl of squash seedlings to find out whether they were suitable for infection. Two A. rhizogenes strains, R1000 and MSU440, were used. Roots containing the respective constructs were selected based on DsRED1 or green fluorescent protein (GFP) fluorescence, and DR5::Egfp-gusA or DR5::gusA insertion, respectively, was verified by PCR. Distribution of the response to auxin was visualized by GFP fluorescence or β-glucuronidase (GUS) activity staining and confirmed by immunolocalization of GFP and GUS proteins, respectively. Key Results Based on the distribution of EdU-labelled cells, it was determined that 6-day-old squash seedlings were suited for inoculation by A. rhizogenes since their root pericycle and the adjacent layers contain enough proliferating cells. Agrobacterium rhizogenes R1000 proved to be the most virulent strain on squash seedlings. Squash roots containing the respective constructs did not exhibit the hairy root phenotype and were morphologically and structurally similar to wild-type roots. Conclusions The auxin response pattern in the root apex of squash resembled that in arabidopsis roots. Composite squash plants obtained by A. rhizogenes-mediated transformation are a good tool for the investigation of root apical meristem

  13. Root canal anatomy of mandibular second molars. Part I.

    PubMed

    Manning, S A

    1990-01-01

    The root canal anatomy of 149 mandibular second molars was studied using a technique in which the pulp was removed, the canal space filled with black ink and the roots demineralized and made transparent. Of the 149 teeth, 22 per cent had single roots, 76 per cent had two roots and 2 per cent had three roots. In the single-rooted teeth, three canals were most common, while in the mesial root of the two-rooted teeth, two canals that joined near the apex and one canal in the distal root were most frequent. Round canals were most common in two-rooted teeth and C-shaped canals in single-rooted teeth. Transverse anastomoses were found in 33 per cent of roots, most commonly in the middle third of the root. Lateral canals were found in 72 per cent of roots, most commonly in the apical third of the root. The apical foramen was positioned at the apex in only 33 per cent of roots, and apical deltas were found in 35 per cent. The patient's age and race affected canal shape, with more round canals present in patients over 35 years of age, and more C-shaped canals in Asians. The sex of the patient and the side of the mouth affected the presence of apical deltas, with more being found in males and on the left side. Single-rooted teeth had more complex root canal systems than two-rooted teeth, with more lateral canals, transverse anastomoses, apical deltas and C-shaped canals.

  14. Time, Individualisation, and Ethics: Relating Vladimir Nabokov and Education

    ERIC Educational Resources Information Center

    Saeverot, Herner

    2014-01-01

    This article states that the concept of time we generally hold is a spatial version of time. However, a spatial time concept creates a series of problems, with unfortunate consequences for education.The problems become particularly obvious when the spatial time concept is used as a basis for the education function that is connected to the…

  15. Citation for Vladimir Cermak: 1995 AGU Flinn Award

    NASA Astrophysics Data System (ADS)

    Pollack, Henry N.; Cermák, Vladìmír

    “Vladimìr Cermák, Director of the Geophysical Institute of the Czech Academy of Sciences in Prague, has for many years played a most remarkable role in bringing Earth scientists from the Eastern and Western Bloc countries together for scientific interactions. However anachronistic the concept of East and West political divisions may seem today, there are many who remember the nearly insuperable obstacles that prevented scientific exchange between those groups for decades prior to 1989. Vladimìr Cermák, through his organizing of small conferences and workshops in Czechoslovakia, accomplished the impossible. Through some extraordinarily deft diplomacy, Cermák obtained funding, secured visas, and mastered arcane currency regulations to enable small groups to meet in splendid castles and elegant country homes in rural Bohemia, facilities without urban distractions which had been placed under the custodianship of the Czech Academy of Science to serve as scientific retreats. Three meetings in the course of a decade stand out: at Liblice in 1982, and at Bechyne in 1987 and 1991, all dealing in general with heat flow and thermal aspects of lithospheric structure. These meetings were not just for prominent senior scientists, though of course many were in attendance. Of special significance were the opportunities for younger researchers to surmount the barriers that had been erected by forces well beyond the sphere of science. As one West German remarked as a graduate student in 1982, ‘I remember well how impressed I was…to learn the details of the daily personal and scientific life of an east German colleague of my own age.’ Cermák knew intuitively that the future belonged to the young, and he wanted to nurture their enthusiasm and stimulate their creativity.

  16. Root approach for estimation of statistical distributions

    NASA Astrophysics Data System (ADS)

    Bogdanov, Yu. I.; Bogdanova, N. A.

    2014-12-01

    Application of root density estimator to problems of statistical data analysis is demonstrated. Four sets of basis functions based on Chebyshev-Hermite, Laguerre, Kravchuk and Charlier polynomials are considered. The sets may be used for numerical analysis in problems of reconstructing statistical distributions by experimental data. Based on the root approach to reconstruction of statistical distributions and quantum states, we study a family of statistical distributions in which the probability density is the product of a Gaussian distribution and an even-degree polynomial. Examples of numerical modeling are given.

  17. Analysis of root reinforcement of vegetated riprap

    NASA Astrophysics Data System (ADS)

    Tron, Stefania; Raymond, Pierre

    2014-05-01

    Riprap is a traditional engineering solution used to protect riverbanks against erosion on developed riparian corridors. However, the traditional riprap does not provide adequate fish and wildlife habitat within the riparian zone, which is normally provided by naturally vegetated stream banks. An innovative approach, which mitigates this issue and at the same time provides stream bank erosion control, is the vegetated riprap technique. This solution, which combines rocks and native vegetation in the form of live cuttings, has been designed and implemented by Terra Erosion Control Ltd for the past 7 years. The aim of this work was to study the effect of the vegetation, in particular the root system, on the stability of the riprap. This analysis was carried out in the late spring of 2013 on the vegetated riprap installation located along the Columbia River riverbank, adjacent to the Teck Metals Ltd. smelter in Trail, British Columbia, Canada. An excavation perpendicular to the river was performed in order to investigate the root system development within the vegetated riprap structure. This excavation exposed one of the Salix bebbiana cuttings installed in 2006. The cutting was 2.3 m long and was set with an inclination of 35° with respect to the horizontal plane: the first 0.3 m was exposed, 1 m was buried within the riprap rocks (which had an average diameter of 30 cm) and the remaining 1.0 m was in the soil matrix below the rocks. The diameter of the roots growing along the cutting were measured in order to obtain the root density at various depths and tensile strength tests were carried out on the Salix bebbiana roots with diameters of up to 9 mm. The aim was to quantitatively estimate the additional cohesion given by the roots. The additional root cohesion was more effective in the deeper soil layer where the soil matrix predominates. In the upper soil layer, where the particle size is significantly higher, roots do not increase the cohesion but act as a

  18. Electrical impedance measurements of root canal length.

    PubMed

    Meredith, N; Gulabivala, K

    1997-06-01

    Electronic methods are now widely used during endodontic treatment for the assessment of root canal length. These commonly measure the electrical resistance or impedance between the root canal and the buccal mucosa. A number of studies have been undertaken to determine the accuracy of commercially available instruments. The aims of this investigation were to determine the electrical impedance characteristics of the root canal and periapical tissues in vivo, measure the changes relative to the distance of an endodontic instrument from the apical constriction and propose an equivalent circuit modelling the periapical tissues. The length of the root canals of 20 previously untreated teeth were determined using radiographic and electronic methods. Minimal canal preparation was carried out and measurements were made with a size 10 K-Flex file. A microprocessor-controlled LCR analyser was used to measure the electrical impedance characteristics of each root canal. The instrument measured the series and parallel resistive (RS, RP) and capacitance (CS, CP) component of the tissues at two test frequencies, 100 Hz and 1 kHz. Measurements were made for each root canal when the diagnostic file was placed at the apical constriction and repeated when the file was withdrawn to -0.5, -1.0, -1.5, -2.0 and -5.0 mm from the foramen. Readings were taken for each canal after the canal had been dried with paper points, and flooded first with deionised water and then with sodium hypochlorite. The root canals were then prepared, cleaned and obturated using standard endodontic procedures. The LCR analyser selected the series resistance component as the major measurement parameter. There was a clear increase in series resistance (RS) with increasing distance from the radiographic apex for dry canals and those containing deionised water and sodium hypochlorite. The mean resistance for dry canals was markedly higher than for those containing fluid, ranging from 22.19 k omega to 92.07 k omega

  19. The design of propeller blade roots

    NASA Technical Reports Server (NTRS)

    Cordes, G

    1942-01-01

    Predicated on the assumption of certain normal conditions for engine and propeller, simple expressions for the static and dynamic stresses of propeller blade roots are evolved. They, in combination with the fatigue strength diagram of the employed material, afford for each engine power one certain operating point by which the state of stress serving as a basis for the design of the root is defined. Different stress cases must be analyzed, depending on the vibration tendency of engine and use of propeller. The solution affords an insight into the possible introduction of different size classes of propeller.

  20. Amyloplast Sedimentation Kinetics in Corn Roots

    NASA Technical Reports Server (NTRS)

    Leopold, A. C.; Sack, F.

    1985-01-01

    Knowledge of the parameters of amyloplast sedimentation is crucial for an evaluation of proposed mechanisms of root graviperception. Early estimates of the rate of root amyloplast sedimentation were as low as 1.2 micron/min which may be too slow for many amyloplasts to reach the vicinity of the new lower wall within the presentation time. On this basis, Haberlandt's classical statolith hypothesis involving amyloplast stimulation of a sensitive surface near the new lower wall was questioned. The aim was to determine the kinetics of amyloplast sedimentation with reference to the presentation time in living and fixed corn rootcap cells as compared with coleoptiles of the same variety.

  1. Isolated root caps, border cells, and mucilage from host roots stimulate hyphal branching of the arbuscular mycorrhizal fungus, Gigaspora gigantea.

    PubMed

    Nagahashi, Gerald; Douds, David D

    2004-09-01

    Unlike previous reports that have shown that water soluble and volatile compounds from roots or root exudates play an important role in precolonization events during arbuscular mycorrhizal (AM) fungus-host root interactions (Bécard & Piché 1989, Giovannetti et al. 1993), the results shown here deal with particulate and viscous fractions isolated from host roots. Root caps and a slow sedimenting particulate fraction (SSPF) were rapidly isolated and separated from Ri T-DNA transformed carrot roots (D. carota) grown in liquid culture. In addition, border cells (BC) and mucilage were isolated from aseptically grown corn seedlings (Zea mays). Root caps, SSPF (composed mainly of small root cap fragments and some BCs), BCs, and mucilage all had an associated AM fungus hyphal branching stimulator. Root caps stored for 5 d at 4 degrees C appeared to either synthesize or slowly release the branching stimulator. Also, isolated root caps from roots grown in the absence of P contained more branch stimulating activity than those isolated from roots grown in the presence of P. Although the branching stimulation activity in particulate fractions was low compared to that of the exudate, the particulate fractions can stick to the root surface at considerable distances from the root tip. This may be significant during the infection and colonization of host roots at sites far removed from the primary location of exudation.

  2. Ameloblastin in Hertwig's epithelial root sheath regulates tooth root formation and development.

    PubMed

    Hirose, Naoto; Shimazu, Atsushi; Watanabe, Mineo; Tanimoto, Kotaro; Koyota, Souichi; Sugiyama, Toshihiro; Uchida, Takashi; Tanne, Kazuo

    2013-01-01

    Tooth root formation begins after the completion of crown morphogenesis. At the end edge of the tooth crown, inner and outer enamel epithelia form Hertwig's epithelial root sheath (HERS). HERS extends along with dental follicular tissue for root formation. Ameloblastin (AMBN) is an enamel matrix protein secreted by ameloblasts and HERS derived cells. A number of enamel proteins are eliminated in root formation, except for AMBN. AMBN may be related to tooth root formation; however, its role in this process remains unclear. In this study, we found AMBN in the basal portion of HERS of lower first molar in mice, but not at the tip. We designed and synthesized small interfering RNA (siRNA) targeting AMBN based on the mouse sequence. When AMBN siRNA was injected into a prospective mandibular first molar of postnatal day 10 mice, the root became shorter 10 days later. Furthermore, HERS in these mice revealed a multilayered appearance and 5-bromo-2'-deoxyuridine (BrdU) positive cells increased in the outer layers. In vitro experiments, when cells were compared with and without transiently expressing AMBN mRNA, expression of growth suppressor genes such as p21(Cip1) and p27(Kip1) was enhanced without AMBN and BrdU incorporation increased. Thus, AMBN may regulate differentiation state of HERS derived cells. Moreover, our results suggest that the expression of AMBN in HERS functions as a trigger for normal root formation.

  3. Tissue specific localization of root infection by fungal pathogens: role of root border cells.

    PubMed

    Gunawardena, Uvini; Hawes, Martha C

    2002-11-01

    When roots of pea seedlings were inoculated uniformly with spores of Nectria haematocca or other pea pathogenic fungi, more than 90% developed lesions in the region of elongation within 3 days. More mature regions of most roots as well as the tip showed no visible signs of infection. Yet, microscopic observation revealed that 'mantles,' comprised of fungal hyphae intermeshed with populations of border cells, covered the tips of most roots. After physical detachment of the mantle, the underlying tip of most roots was found to be free of infection. Mantle-covered root tips did not respond to invasion of their border cells by activation of known defense genes unless there was invasion of the tip itself, as revealed by the presence of a lesion. Concomitant with the activation of defense genes was the induction of a cell-wall degrading enzyme whose expression is a marker for renewed production of border cells. Mantle formation did not occur in response to nonpathogens. The data are consistent with the hypothesis that border cells serve as a host-specific 'decoy' that protects root meristems by inhibiting fungal infection of the root tip.

  4. ROOT.NET: Using ROOT from .NET languages like C# and F#

    NASA Astrophysics Data System (ADS)

    Watts, G.

    2012-12-01

    ROOT.NET provides an interface between Microsoft's Common Language Runtime (CLR) and .NET technology and the ubiquitous particle physics analysis tool, ROOT. ROOT.NET automatically generates a series of efficient wrappers around the ROOT API. Unlike pyROOT, these wrappers are statically typed and so are highly efficient as compared to the Python wrappers. The connection to .NET means that one gains access to the full series of languages developed for the CLR including functional languages like F# (based on OCaml). Many features that make ROOT objects work well in the .NET world are added (properties, IEnumerable interface, LINQ compatibility, etc.). Dynamic languages based on the CLR can be used as well, of course (Python, for example). Additionally it is now possible to access ROOT objects that are unknown to the translation tool. This poster will describe the techniques used to effect this translation, along with performance comparisons, and examples. All described source code is posted on the open source site CodePlex.

  5. Arabidopsis alcohol dehydrogenase expression in both shoots and roots is conditioned by root growth environment

    NASA Technical Reports Server (NTRS)

    Chung, H. J.; Ferl, R. J.

    1999-01-01

    It is widely accepted that the Arabidopsis Adh (alcohol dehydrogenase) gene is constitutively expressed at low levels in the roots of young plants grown on agar media, and that the expression level is greatly induced by anoxic or hypoxic stresses. We questioned whether the agar medium itself created an anaerobic environment for the roots upon their growing into the gel. beta-Glucuronidase (GUS) expression driven by the Adh promoter was examined by growing transgenic Arabidopsis plants in different growing systems. Whereas roots grown on horizontal-positioned plates showed high Adh/GUS expression levels, roots from vertical-positioned plates had no Adh/GUS expression. Additional results indicate that growth on vertical plates closely mimics the Adh/GUS expression observed for soil-grown seedlings, and that growth on horizontal plates results in induction of high Adh/GUS expression that is consistent with hypoxic or anoxic conditions within the agar of the root zone. Adh/GUS expression in the shoot apex is also highly induced by root penetration of the agar medium. This induction of Adh/GUS in shoot apex and roots is due, at least in part, to mechanisms involving Ca2+ signal transduction.

  6. Effect of water table fluctuations on phreatophytic root distribution.

    PubMed

    Tron, Stefania; Laio, Francesco; Ridolfi, Luca

    2014-11-01

    The vertical root distribution of riparian vegetation plays a relevant role in soil water balance, in the partition of water fluxes into evaporation and transpiration, in the biogeochemistry of hyporheic corridors, in river morphodynamics evolution, and in bioengineering applications. The aim of this work is to assess the effect of the stochastic variability of the river level on the root distribution of phreatophytic plants. A function describing the vertical root profile has been analytically obtained by coupling a white shot noise representation of the river level variability to a description of the dynamics of root growth and decay. The root profile depends on easily determined parameters, linked to stream dynamics, vegetation and soil characteristics. The riparian vegetation of a river characterized by a high variability turns out to have a rooting system spread over larger depths, but with shallower mean root depths. In contrast, a lower river variability determines root profiles with higher mean root depths. PMID:25014476

  7. Root Traits and Phenotyping Strategies for Plant Improvement

    PubMed Central

    Paez-Garcia, Ana; Motes, Christy M.; Scheible, Wolf-Rüdiger; Chen, Rujin; Blancaflor, Elison B.; Monteros, Maria J.

    2015-01-01

    Roots are crucial for nutrient and water acquisition and can be targeted to enhance plant productivity under a broad range of growing conditions. A current challenge for plant breeding is the limited ability to phenotype and select for desirable root characteristics due to their underground location. Plant breeding efforts aimed at modifying root traits can result in novel, more stress-tolerant crops and increased yield by enhancing the capacity of the plant for soil exploration and, thus, water and nutrient acquisition. Available approaches for root phenotyping in laboratory, greenhouse and field encompass simple agar plates to labor-intensive root digging (i.e., shovelomics) and soil boring methods, the construction of underground root observation stations and sophisticated computer-assisted root imaging. Here, we summarize root architectural traits relevant to crop productivity, survey root phenotyping strategies and describe their advantages, limitations and practical value for crop and forage breeding programs. PMID:27135332

  8. Mycorrhiza alters the profile of root hairs in trifoliate orange.

    PubMed

    Wu, Qiang-Sheng; Liu, Chun-Yan; Zhang, De-Jian; Zou, Ying-Ning; He, Xin-Hua; Wu, Qing-Hua

    2016-04-01

    Root hairs and arbuscular mycorrhiza (AM) coexist in root systems for nutrient and water absorption, but the relation between AM and root hairs is poorly known. A pot study was performed to evaluate the effects of four different AM fungi (AMF), namely, Claroideoglomus etunicatum, Diversispora versiformis, Funneliformis mosseae, and Rhizophagus intraradices on root hair development in trifoliate orange (Poncirus trifoliata) seedlings grown in sand. Mycorrhizal seedlings showed significantly higher root hair density than non-mycorrhizal seedlings, irrespective of AMF species. AMF inoculation generally significantly decreased root hair length in the first- and second-order lateral roots but increased it in the third- and fourth-order lateral roots. AMF colonization induced diverse responses in root hair diameter of different order lateral roots. Considerably greater concentrations of phosphorus (P), nitric oxide (NO), glucose, sucrose, indole-3-acetic acid (IAA), and methyl jasmonate (MeJA) were found in roots of AM seedlings than in non-AM seedlings. Levels of P, NO, carbohydrates, IAA, and MeJA in roots were correlated with AM formation and root hair development. These results suggest that AMF could alter the profile of root hairs in trifoliate orange through modulation of physiological activities. F. mosseae, which had the greatest positive effects, could represent an efficient AM fungus for increasing fruit yields or decreasing fertilizer inputs in citrus production.

  9. Disturbances during minirhizotron installation can affect root observation data

    SciTech Connect

    Joslin, J.D.; Wolfe, M.H.

    1999-01-01

    Use of minirhizotrons in forested ecosystems has produced considerable information on production, mortality, distribution, and the phenology of root growth. But installation of minirhizotrons severs roots and disturbs soil, which can cause root proliferation in perennial plants. The authors compared the magnitude and vertical distribution of root growth observations in a mature hardwood forest during the growing season immediately after minirhizotron installation with observations more than two years later. They also compared the vertical root growth distribution during these two different years with the preinstallation distribution of fine root biomass. Before minirhizotron installation and again two years later, about 74% of fine root biomass was in the upper 30 cm of soil, but immediately after installation, 98% of the root elongation was in the upper 30 cm. Large differences in the quantity of root elongation were observed across different slope positions in the minirhizotron data from the first growing season (approximately four times greater on the upper slope as the lower slope). Such differences with slope position were not sen in the later minirhizotron data, nor in the preinstallation fine root biomass data. The evidence suggests that the minirhizotron data collected immediately after installation can be biased by disturbance of roots and soil during installation, which result in excessive root proliferation, particularly near the soil surface. Root proliferation appears to be the result of a response to both root pruning and to nutrient release in microsites near the newly installed minirhizotron.

  10. Mycorrhiza alters the profile of root hairs in trifoliate orange.

    PubMed

    Wu, Qiang-Sheng; Liu, Chun-Yan; Zhang, De-Jian; Zou, Ying-Ning; He, Xin-Hua; Wu, Qing-Hua

    2016-04-01

    Root hairs and arbuscular mycorrhiza (AM) coexist in root systems for nutrient and water absorption, but the relation between AM and root hairs is poorly known. A pot study was performed to evaluate the effects of four different AM fungi (AMF), namely, Claroideoglomus etunicatum, Diversispora versiformis, Funneliformis mosseae, and Rhizophagus intraradices on root hair development in trifoliate orange (Poncirus trifoliata) seedlings grown in sand. Mycorrhizal seedlings showed significantly higher root hair density than non-mycorrhizal seedlings, irrespective of AMF species. AMF inoculation generally significantly decreased root hair length in the first- and second-order lateral roots but increased it in the third- and fourth-order lateral roots. AMF colonization induced diverse responses in root hair diameter of different order lateral roots. Considerably greater concentrations of phosphorus (P), nitric oxide (NO), glucose, sucrose, indole-3-acetic acid (IAA), and methyl jasmonate (MeJA) were found in roots of AM seedlings than in non-AM seedlings. Levels of P, NO, carbohydrates, IAA, and MeJA in roots were correlated with AM formation and root hair development. These results suggest that AMF could alter the profile of root hairs in trifoliate orange through modulation of physiological activities. F. mosseae, which had the greatest positive effects, could represent an efficient AM fungus for increasing fruit yields or decreasing fertilizer inputs in citrus production. PMID:26499883

  11. [Morphology of wheat roots under low-phosphorus stress].

    PubMed

    Sun, Haiguo; Zhang, Fusuo

    2002-03-01

    The morphology of root systems of different wheat (Triticum aestivum L.) genotypes under low-phosphorus stress were studied to determine the effects of external factors on components of root system and the early morphological indicators related to phosphorus efficiency. The number of root axes and the length of lateral root of P-deficient plant were significantly lower than those of P-sufficient plant. The length of root axis and root system, and the number of lateral roots were sharply increased under low-P stress. The number and length of root axis were significantly different under different levels of phosphorus supply and among different wheat genotypes under same phosphorus supply. This implied that the two traits (number and length of root axis) were controlled by genotype and external factors. The difference in the characteristics of lateral root of the given wheat genotypes was significant only between different levels of P supply. It showed that the traits of lateral root mainly depended on external factors. The length and number of root axis, root length, and root angle were significantly different among 6 wheat genotypes. There exited significant linear relationships between relative grain yield and the interaction of the morphological traits, and it implied that the traits could be used as early indicators of selecting high P-efficiency wheat varieties.

  12. Chlorogenic acid participates in the regulation of shoot, root and root hair development in Hypericum perforatum.

    PubMed

    Franklin, G; Dias, A C P

    2011-08-01

    Chlorogenic acid (CGA), a product of the phenylpropanoid pathway, is one of the most widespread soluble phenolic compounds in the plant kingdom. Although CGA is known to have important roles in plant function, its relevance in plant de novo organogenesis is not yet understood. With a series of experiments, here we show that CGA has a potential role in shoot, root and root hair development. In the first phase of our investigation, we developed an efficient and novel thin cell layer (TCL) regeneration protocol for Hypericum perforatum which could bridge all the in vitro morphogenetic stages between single cell and complete plant. Tissues at different morphogenetic states were analysed for their phenolic profile which revealed that shoot differentiation from callus tissues of H. perforatum is accompanied by the onset of CGA production. Further, the relevance of CGA in de novo organogenesis was deciphered by culturing highly organogenic root explants on media augmented with various concentrations of CGA. Results of this experiment showed that CGA concentrations lower than 10.0 mg l⁻¹ did not affect shoot organogenesis, whereas, higher concentrations significantly reduced this process in a concentration-dependent manner. In spite of the differential concentration-dependent effects of CGA on shoot regeneration, supplementation of CGA did not have any effect on the production of lateral roots and root hairs. Interestingly, CGA showed a concentration-dependent positive correlation with lateral roots and root hairs production in the presence of α-naphthaleneacetic acid (NAA). When the culture medium was augmented with 2-aminoindane-2-phosphonic acid (AIP), an inhibitor of phenylalanine ammonia lyase (PAL), induction of shoots, lateral roots and root hairs from the explants was significantly affected. Addition of an optimum concentration of CGA in these cultures partially restored all these organogenic processes.

  13. Impact of Heterobasidion root-rot on fine root morphology and associated fungi in Picea abies stands on peat soils.

    PubMed

    Gaitnieks, Talis; Klavina, Darta; Muiznieks, Indrikis; Pennanen, Taina; Velmala, Sannakajsa; Vasaitis, Rimvydas; Menkis, Audrius

    2016-07-01

    We examined differences in fine root morphology, mycorrhizal colonisation and root-inhabiting fungal communities between Picea abies individuals infected by Heterobasidion root-rot compared with healthy individuals in four stands on peat soils in Latvia. We hypothesised that decreased tree vitality and alteration in supply of photosynthates belowground due to root-rot infection might lead to changes in fungal communities of tree roots. Plots were established in places where trees were infected and in places where they were healthy. Within each stand, five replicate soil cores with roots were taken to 20 cm depth in each root-rot infected and uninfected plot. Root morphological parameters, mycorrhizal colonisation and associated fungal communities, and soil chemical properties were analysed. In three stands root morphological parameters and in all stands root mycorrhizal colonisation were similar between root-rot infected and uninfected plots. In one stand, there were significant differences in root morphological parameters between root-rot infected versus uninfected plots, but these were likely due to significant differences in soil chemical properties between the plots. Sequencing of the internal transcribed spacer of fungal nuclear rDNA from ectomycorrhizal (ECM) root morphotypes of P. abies revealed the presence of 42 fungal species, among which ECM basidiomycetes Tylospora asterophora (24.6 % of fine roots examined), Amphinema byssoides (14.5 %) and Russula sapinea (9.7 %) were most common. Within each stand, the richness of fungal species and the composition of fungal communities in root-rot infected versus uninfected plots were similar. In conclusion, Heterobasidion root-rot had little or no effect on fine root morphology, mycorrhizal colonisation and composition of fungal communities in fine roots of P. abies growing on peat soils.

  14. Impact of Heterobasidion root-rot on fine root morphology and associated fungi in Picea abies stands on peat soils.

    PubMed

    Gaitnieks, Talis; Klavina, Darta; Muiznieks, Indrikis; Pennanen, Taina; Velmala, Sannakajsa; Vasaitis, Rimvydas; Menkis, Audrius

    2016-07-01

    We examined differences in fine root morphology, mycorrhizal colonisation and root-inhabiting fungal communities between Picea abies individuals infected by Heterobasidion root-rot compared with healthy individuals in four stands on peat soils in Latvia. We hypothesised that decreased tree vitality and alteration in supply of photosynthates belowground due to root-rot infection might lead to changes in fungal communities of tree roots. Plots were established in places where trees were infected and in places where they were healthy. Within each stand, five replicate soil cores with roots were taken to 20 cm depth in each root-rot infected and uninfected plot. Root morphological parameters, mycorrhizal colonisation and associated fungal communities, and soil chemical properties were analysed. In three stands root morphological parameters and in all stands root mycorrhizal colonisation were similar between root-rot infected and uninfected plots. In one stand, there were significant differences in root morphological parameters between root-rot infected versus uninfected plots, but these were likely due to significant differences in soil chemical properties between the plots. Sequencing of the internal transcribed spacer of fungal nuclear rDNA from ectomycorrhizal (ECM) root morphotypes of P. abies revealed the presence of 42 fungal species, among which ECM basidiomycetes Tylospora asterophora (24.6 % of fine roots examined), Amphinema byssoides (14.5 %) and Russula sapinea (9.7 %) were most common. Within each stand, the richness of fungal species and the composition of fungal communities in root-rot infected versus uninfected plots were similar. In conclusion, Heterobasidion root-rot had little or no effect on fine root morphology, mycorrhizal colonisation and composition of fungal communities in fine roots of P. abies growing on peat soils. PMID:26861482

  15. Functional traits and root morphology of alpine plants

    PubMed Central

    Pohl, Mandy; Stroude, Raphaël; Buttler, Alexandre; Rixen, Christian

    2011-01-01

    Background and Aims Vegetation has long been recognized to protect the soil from erosion. Understanding species differences in root morphology and functional traits is an important step to assess which species and species mixtures may provide erosion control. Furthermore, extending classification of plant functional types towards root traits may be a useful procedure in understanding important root functions. Methods In this study, pioneer data on traits of alpine plant species, i.e. plant height and shoot biomass, root depth, horizontal root spreading, root length, diameter, tensile strength, plant age and root biomass, from a disturbed site in the Swiss Alps are presented. The applicability of three classifications of plant functional types (PFTs), i.e. life form, growth form and root type, was examined for above- and below-ground plant traits. Key Results Plant traits differed considerably among species even of the same life form, e.g. in the case of total root length by more than two orders of magnitude. Within the same root diameter, species differed significantly in tensile strength: some species (Geum reptans and Luzula spicata) had roots more than twice as strong as those of other species. Species of different life forms provided different root functions (e.g. root depth and horizontal root spreading) that may be important for soil physical processes. All classifications of PFTs were helpful to categorize plant traits; however, the PFTs according to root type explained total root length far better than the other PFTs. Conclusions The results of the study illustrate the remarkable differences between root traits of alpine plants, some of which cannot be assessed from simple morphological inspection, e.g. tensile strength. PFT classification based on root traits seems useful to categorize plant traits, even though some patterns are better explained at the individual species level. PMID:21795278

  16. Rooting greenwood tip cuttings of several Populus clones hydroponically (hydroponic rooting of Populus cuttings)

    SciTech Connect

    Phipps, H.M.; Hansen, E.A.; Tolsted, D.N.

    1980-01-01

    Greenwood cuttings of several Populus clones were successfully rooted with a relatively simple hydroponic method. Indolebutyric acid and naphthaleneacetic acid at concentrations of 500 to 5000 ppM applied as a quick dip to the cutting bases, a complete nutrient solution at 20 to 40% of full strength, and a solution temperature between 27 and 30/sup 0/C generally produced the best rooting performance of most clones. Cuttings propagated by the hydroponic procedure rooted faster and generally outgrew those produced by a standard method after being transplanted to pots and grown in the greenhouse.

  17. A fast parallel algorithm for determining all roots of a polynomial with real roots

    SciTech Connect

    Benor, M.; Feig, E.; Kozen, D.; Tiwari, P.

    1988-12-01

    Given a polynomial rho(z) of degree n with m bit integer coefficients and an integer ..mu.., the problem of determining all its roots with error less than 2/sup -..mu../ is considered. It is shown that this problem is in the class NC if rho(z) has all real roots. Some very interesting properties of a Sturm sequence of a polynomial with distinct real roots are proved and used in the design of a fast parallel algorithm for this problem. Using Newton identities and a novel numerical integration scheme for evaluating a contour integral to high precision, this algorithm determines good approximations to the linear factors of rho(z).

  18. Short-term tissue response to potential root-end filling materials in infected root canals.

    PubMed

    Chong, B S; Pitt Ford, T R; Kariyawasam, S P

    1997-07-01

    The short-term tissue responses to two potential root-end filling materials, a light-cured glass ionomer cement (Vitrebond) and a reinforced zinc oxide-eugenol cement (Kalzinol), were compared with that to amalgam using a previously devised experimental model. In 24 premolar teeth of beagle dogs (47 roots), a collection of endodontic pathogenic bacteria was first inoculated into the root canals to induce periradicular lesions. On each root, an apicoectomy was performed and root-end cavities prepared to receive fillings of each material. The teeth and surrounding jaw were removed after 2 weeks (23 roots) and 1 week (24 roots); they were then prepared for histological examination. The tissue response to amalgam fillings after 2 weeks and 1 week was marked by moderate or severe inflammation on all roots, and extended to < or = 0.5 mm or > 0.5 mm in 15 out of 16 roots. In contrast, after 2 weeks, the majority of roots filled with Kalzinol showed little or moderate inflammation, while the tissue response to Vitrebond was the best of the three materials, and was also the least extensive. After 1 week, the overall best tissue response was with Vitrebond, followed by Kalzinol. The differences between materials for both time periods with either none or few inflammatory cells when compared with that with either moderate or severe inflammation were not statistically significant (P < 0.02). However, the differences between materials for both time periods with no inflammation or inflammation extending < 0.2 mm when compared with that with inflammation extending > 0.2 mm (< or = 0.5 mm or > 0.5 mm) were statistically significant (P < 0.01). Apart from amalgam, in which healing was marked by the persistence of a localized focus of inflammation adjacent to the root-end filling, even though there were intersample variations, there was little overall difference in the temporal and qualitative healing response to Vitrebond and Kalzinol. Both Vitrebond and Kalzinol have potential as

  19. The Pythagorean Roots of Introductory Physics

    ERIC Educational Resources Information Center

    Clarage, James B.

    2013-01-01

    Much of the mathematical reasoning employed in the typical introductory physics course can be traced to Pythagorean roots planted over two thousand years ago. Besides obvious examples involving the Pythagorean theorem, I draw attention to standard physics problems and derivations which often unknowingly rely upon the Pythagoreans' work on…

  20. Roots, Not Parachutes: Research Collaborations Combat Outbreaks.

    PubMed

    Yozwiak, Nathan L; Happi, Christian T; Grant, Donald S; Schieffelin, John S; Garry, Robert F; Sabeti, Pardis C; Andersen, Kristian G

    2016-06-30

    Recent infectious disease epidemics illustrate how health systems failures anywhere can create disease vulnerabilities everywhere. We must therefore prioritize investments in health care infrastructure in outbreak-prone regions of the world. We describe how "rooted" research collaborations can establish capacity for pathogen surveillance and facilitate rapid outbreak responses.

  1. A new sesquiterpenoid from Saussurea lappa roots.

    PubMed

    Cao, Kun; Qian, Wei; Xu, Yi; Zhou, Zhen; Zhang, Qing; Zhang, Xiaofeng

    2016-10-01

    A new sesquiterpenoid, 10α-methoxyartemisinic acid (1) was isolated from Saussurea lappa roots along with two known compounds, costunolide (2) and dehydrocostus lactone (3) by high-speed countercurrent chromatography with purities of 85, 95 and 98%, respectively. Their structures were determined on the basis of spectral data including 1D and 2D NMR and HREIMS.

  2. Perception of gravity in the lentil root.

    PubMed

    Perbal, G; Driss-Ecole, D; Salle, G; Raffin, J

    1986-01-01

    The gravisensing cells (statocytes), responsible for the perception of gravity, are located in the center of the root cap. The statocytes contain voluminous amyloplasts (statoliths) which are capable of moving in the direction of gravity. The sedimentation of the amyloplasts is due to the starch grains, which are much denser than the surrounding cytoplasm. When the starch of these plastids is removed, the statoliths lose their mobility and the roots are no longer able to respond to gravity. When the roots grow in their normal position, the statoliths are sedimented on large aggregates of endoplasmic reticulum. The role of the association between these two types of organelles is still controversial. For some authors, the amyloplast-endoplasmic reticulum complex would play a role in the induction of the gravitropic response. For other authors, this complex would regulate gravitropic curvature and is more likely to be involved in the termination of the response. The goal of the 39F experiment (Biorack) was to dissociate this complex by growing lentil roots in microgravity and to stimulate them on a centrifuge in order to determine if they were still capable of curvature.

  3. Prosody and the Roots of Parsing.

    ERIC Educational Resources Information Center

    Morgan, James L.

    1996-01-01

    Research presented in this paper on the character of infant-directed speech and the nature of infant speech perception abilities from 6 to 12 months suggests that prosody contributes significantly to early analyses of child languages and assists infants in developing root processes of parsing. (104 references) (Author/CK)

  4. Seasonal patterns of root production in grape

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Plant phenology has important implications for plant resource use, carbon fluxes, and interactions with other organisms. Although aboveground phenology has been well studied, the timing of root growth is not well understood, and controls on the timing of growth unclear. We used minirhizotrons to exa...

  5. The Root-Finding Route to Chaos.

    ERIC Educational Resources Information Center

    Parris, Richard

    1991-01-01

    This article, which is organized around a single, well-known algorithm for root extraction, presents a way of incorporating dynamical systems into the teaching of mathematics. Included are sample exercises using complex numbers and the computer where students have the opportunity to do some analysis on this algorithm. (KR)

  6. Rooted staggered fermions: good, bad or ugly?

    NASA Astrophysics Data System (ADS)

    Sharpe, Stephen

    2006-12-01

    I give a status report on the validity of the so-called "fourth-root trick", i.e. the procedure of representing the determinant for a single fermion by the fourth root of the staggered fermion determinant. This has been used by the MILC collaboration to create a large ensemble of lattices using which many quantities of physical interest have been and are being calculated. It is also used extensively in studies of QCD thermodynamics. The main question is whether the theory so defined has the correct continuum limit. There has been significant recent progress towards answering this question. After recalling the issue, and putting it into a broader context of results from statistical mechanics, I critically review the new work. I also address the related issue of the impact of treating valence and sea quarks differently in rooted simulations, discuss whether rooted simulations at finite temperature and density are subject to additional concerns, and briefly update results for quark masses using the MILC configurations. An answer to the question in the title is proposed in the summary.

  7. New experimental techniques for studying root herbivores

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Relatively less is known about belowground ground herbivores than their aboveground counterparts . This is largely because root-feeding herbivores live in the soil, an opaque, tri-phasic medium, which makes them harder to study and perhaps less perceptible as key components of many terrestrial ecosy...

  8. Pectate hydrolases of parsley (Petroselinum crispum) roots.

    PubMed

    Flodrová, Dana; Dzúrovä, Mária; Lisková, Desana; Mohand, Fairouz Ait; Mislovicová, Danica; Malovícová, Anna; Voburka, Zdenek; Omelková, Jirina; Stratilová, Eva

    2007-01-01

    The presence of various enzyme forms with terminal action pattern on pectate was evaluated in a protein mixture obtained from parsley roots. Enzymes found in the soluble fraction of roots (juice) were purified to homogeneity according to SDS-PAGE, partially separated by preparative isoelectric focusing and characterized. Three forms with pH optima 3.6, 4.2 and 4.6 clearly preferred substrates with a lower degree of polymerization (oligogalacturonates) while the form with pH optimum 5.2 was a typical exopolygalacturonase [EC 3. 2.1.67] with relatively fast cleavage of polymeric substrate. The forms with pH optima 3.6, 4.2 and 5.2 were released from the pulp, too. The form from the pulp with pH optimum 4.6 preferred higher oligogalacturonates and was not described in plants previously. The production of individual forms in roots was compared with that produced by root cells cultivated on solid medium and in liquid one.

  9. Antimicrobial Constituents from Allium hookeri Root.

    PubMed

    Kima, Jung-Eun; Seo, Ji-Hye; Bae, Min-Suk; Bae, Chun-Sik; Yoo, Jin-Cheol; Bang, Mi-Ae; Cho, Seung-Sik; Park, Dae-Hun

    2016-02-01

    In this study, we partially purified the ethyl acetate soluble fraction of the ethanol extract of the root of Allum hookeri. We identified seven compounds, benzoic acid, tetradecanoic acid, hexadecanoic acid, ferulic acid, cinnamic acid, octadecanoic acid and hexanedioic acid, that have antimicrobial activity using GC-MS, and evaluated the antimicrobial susceptibility and MIC (minimum inhibitory concentration) against multidrug-resistant bacteria.

  10. Quest for Continual Growth Takes Root

    ERIC Educational Resources Information Center

    Surdey, Mary M.; Hashey, Jane M.

    2006-01-01

    In this article, the authors describe how the quest for continual growth has taken its root at Vestal Central School district. Located at the heart of upstate New York, educators at Vestal Central School district have created a spirit of "kaizen," a Japanese word meaning the relentless quest for continual improvement and higher-quality…

  11. Hairy root cultures for secondary metabolites production.

    PubMed

    Pistelli, Laura; Giovannini, Annalisa; Ruffoni, Barbara; Bertoli, Alessandra; Pistelli, Luisa

    2010-01-01

    Hairy roots (HRs) are differentiated cultures of transformed roots generated by the infection of wounded higher plants with Agrobacterium rhizogenes. This pathogen causes the HR disease leading to the neoplastic growth of roots that are characterized by high growth rate in hormone free media and genetic stability. HRs produce the same phytochemicals pattern of the corresponding wild type organ. High stability and productivity features allow the exploitation of HRs as valuable biotechnological tool for the production of plant secondary metabolites. In addition, several elicitation methods can be used to further enhance their accumulation in both small and large scale production. However, in the latter case, cultivation in bioreactors should be still optimized. HRs can be also utilised as biological farm for the production of recombinant proteins, hence holding additional potential for industrial use. HR technology has been strongly improved by increased knowledge of molecular mechanisms underlying their development. The present review summarizes updated aspects of the hairy root induction, genetics and metabolite production. PMID:21520711

  12. Plant Hormones: How They Affect Root Formation.

    ERIC Educational Resources Information Center

    Reinhard, Diana Hereda

    This science study aid, produced by the U.S. Department of Agriculture, includes a series of plant rooting activities for secondary science classes. The material in the pamphlet is written for students and includes background information on plant hormones, a vocabulary list, and five learning activities. Objectives, needed materials, and…

  13. Tapping Ancient Roots: Plaited Paper Baskets

    ERIC Educational Resources Information Center

    Patrick, Jane

    2011-01-01

    With ancient roots, basket making has been practiced since the earliest civilizations, and according to textile experts, probably pre-dates pottery. This is partly conjecture since few baskets remain. It is through evidence found in clay impressions that the earliest baskets reveal themselves. Basically, basketry construction is like flat weaving.…

  14. Learning, Judgment, and the Rooted Particular

    ERIC Educational Resources Information Center

    McCabe, David

    2012-01-01

    This article begins by acknowledging the general worry that scholarship in the humanities lacks the rigor and objectivity of other scholarly fields. In considering the validity of that criticism, I distinguish two models of learning: the covering law model exemplified by the natural sciences, and the model of rooted particularity that…

  15. Root region airfoil for wind turbine

    DOEpatents

    Tangler, James L.; Somers, Dan M.

    1995-01-01

    A thick airfoil for the root region of the blade of a wind turbine. The airfoil has a thickness in a range from 24%-26% and a Reynolds number in a range from 1,000,000 to 1,800,000. The airfoil has a maximum lift coefficient of 1.4-1.6 that has minimum sensitivity to roughness effects.

  16. Pharmacognostical Standardization of Tephrosia purpurea Pers Root

    PubMed Central

    Sandhya, S.; Ventaka, Ramana K.; Vinod, K.R

    2010-01-01

    Wild Indigo or Purple Tephrosia or fish poison occurs throughout the Indian subcontinent. It is widely used in the treatment of inflammation, diabetes, rheumatism, asthma, diarrhoea and many other ailments. But so far the pharmacognostic standardization has not been reported for its proper identification. Hence the present study is a pharmacognosy work carried out for the root part. This may help in the identification of the plant species. A thin transverse section, powder microscopy, measurement of the dimensions of cell structures, fluorescence analysis and physico chemical parameters were conducted for the root. From the TS, the secondary xylem fibres and vessels were found to be the tissues of diagnostic importance. The xylem vessels were of two types: narrow and long; broad and short. The important characters in the powdered microscopy were vessel elements, fibres and xylem parenchyma cells. The different fluorescent light shades were obtained under short and long UV light for both powder as well as the extracts of the root. The proximate analysis values were also obtained in a satisfactory way. Combining all these data a suitable root profile for plant can be constructed which may help in the identification of quality of the plant part. PMID:22557415

  17. Middle America: Its Historic and Cultural Roots.

    ERIC Educational Resources Information Center

    Palmer, J. Jesse; And Others

    1988-01-01

    The second in a three-part geographical education series, this article focuses on human-environmental relations in the geographical area including Central America, Mexico, and the Caribbean Sea. The article examines how the historical and cultural roots of the people of Middle America have influenced their interaction with and modification of…

  18. Alex Haley's Tips for "Roots" Projects

    ERIC Educational Resources Information Center

    Reed, Sally

    1977-01-01

    The author of "Roots" gives some tips for launching family history projects with elementary students. He also tells why they are important. Included here is a tear-out-and-duplicate family tree chart which students can use in their own efforts. (Editor/RK)

  19. "Roots," A Stimulus for Community Involvement.

    ERIC Educational Resources Information Center

    Greathouse, Betty; Young, Barbara Goldman

    1979-01-01

    Presents a rationale for introducing multiethnic studies into elementary and secondary social studies classrooms and explains how community resources can help students understand themselves and others. Learning activities based on the televised version of Alex Haley's "Roots" are suggested. (Author/DB)

  20. The Philosophical Roots of Lifelong Learning.

    ERIC Educational Resources Information Center

    Lewis, Rosa B.

    The philosophical roots of the concept of lifelong learning are considered in relation to the views of Socrates, Plato, and Aristotle. They pioneered in their analyses of intellectual development and in the importance of the use of the mind throughout the life span. Plato and Aristotle added metaphysical arguments to support their systems of…

  1. On Nth roots of positive operators

    NASA Technical Reports Server (NTRS)

    Brown, D. R.; Omalley, M. J.

    1978-01-01

    A bounded operator A on a Hilbert space H was positive. These operators were symmetric, and as such constitute a natural generalization of nonnegative real diagonal matrices. The following result is thus both well known and not surprising: A positive operator has a unique positive square root (under operator composition).

  2. Challenging Cancer at the Grass Roots.

    ERIC Educational Resources Information Center

    Casto, James E.

    1997-01-01

    The National Cancer Institute created the Appalachia Leadership Initiative on Cancer, composed of four similar projects that focus on increasing screening for cervical and breast cancer among low-income, older women. The program relies on community coalitions that develop innovative grass roots methods to spread the message about the importance of…

  3. Empty Consonants in Root-Medial Position.

    ERIC Educational Resources Information Center

    Marlett, Stephen A.

    This analysis of verb morphology in Seri finds evidence that empty consonants occur in root-medial position. Analysis focuses on the parallel conjugation patterns of the verbs for "know" and "give," finding an empty consonant slot in the middle of each. This position is never preceded by a consonant, so it never appears as a geminated consonant,…

  4. Hormone symphony during root growth and development.

    PubMed

    Garay-Arroyo, Adriana; De La Paz Sánchez, María; García-Ponce, Berenice; Azpeitia, Eugenio; Alvarez-Buylla, Elena R

    2012-12-01

    Hormones regulate plant growth and development in response to external environmental stimuli via complex signal transduction pathways, which in turn form complex networks of interaction. Several classes of hormones have been reported, and their activity depends on their biosynthesis, transport, conjugation, accumulation in the vacuole, and degradation. However, the activity of a given hormone is also dependent on its interaction with other hormones. Indeed, there is a complex crosstalk between hormones that regulates their biosynthesis, transport, and/or signaling functionality, although some hormones have overlapping or opposite functions. The plant root is a particularly useful system in which to study the complex role of plant hormones in the plastic control of plant development. Physiological, cellular, and molecular genetic approaches have been used to study the role of plant hormones in root meristem homeostasis. In this review, we discuss recent findings on the synthesis, signaling, transport of hormones and role during root development and examine the role of hormone crosstalk in maintaining homeostasis in the apical root meristem.

  5. On Two California Penutian Roots for "Two"

    ERIC Educational Resources Information Center

    Silverstein, Michael

    1975-01-01

    This article proposes a California Penutian etymology for two distinct roots meaning "two," and shows some of the transformations of morphological material which have characterized innovations in language subgroups related to California Penutian. This provides important evidence for the history of California Penutian. (CLK)

  6. Getting to the Root of Things

    ERIC Educational Resources Information Center

    Lott, Debra

    2008-01-01

    This article introduces a new "perspective" on the typical landscape painting. It is an opportunity for art students to study the local ecosystem and native trees in their community. Other aspects of this assignment are the study of Symbolism and a new focus on the natural designs created by exposed tree roots. (Contains 1 web link.)

  7. Endosomal Interactions during Root Hair Growth

    PubMed Central

    von Wangenheim, Daniel; Rosero, Amparo; Komis, George; Šamajová, Olga; Ovečka, Miroslav; Voigt, Boris; Šamaj, Jozef

    2016-01-01

    The dynamic localization of endosomal compartments labeled with targeted fluorescent protein tags is routinely followed by time lapse fluorescence microscopy approaches and single particle tracking algorithms. In this way trajectories of individual endosomes can be mapped and linked to physiological processes as cell growth. However, other aspects of dynamic behavior including endosomal interactions are difficult to follow in this manner. Therefore, we characterized the localization and dynamic properties of early and late endosomes throughout the entire course of root hair formation by means of spinning disc time lapse imaging and post-acquisition automated multitracking and quantitative analysis. Our results show differential motile behavior of early and late endosomes and interactions of late endosomes that may be specified to particular root hair domains. Detailed data analysis revealed a particular transient interaction between late endosomes—termed herein as dancing-endosomes—which is not concluding to vesicular fusion. Endosomes preferentially located in the root hair tip interacted as dancing-endosomes and traveled short distances during this interaction. Finally, sizes of early and late endosomes were addressed by means of super-resolution structured illumination microscopy (SIM) to corroborate measurements on the spinning disc. This is a first study providing quantitative microscopic data on dynamic spatio-temporal interactions of endosomes during root hair tip growth. PMID:26858728

  8. Historic and Cultural Roots of Apartheid.

    ERIC Educational Resources Information Center

    Chonco, Seshi

    1987-01-01

    Reviews the historical and cultural roots of the South African system of apartheid. Covers early Dutch settlement, the Anglo-Boer War, the Native Land Act of 1913, and the rise of the National Party. Concludes with a discussion of the different perspectives held by black and white South Africans on the "progress" made in recent years. (JDH)

  9. Roots, Not Parachutes: Research Collaborations Combat Outbreaks.

    PubMed

    Yozwiak, Nathan L; Happi, Christian T; Grant, Donald S; Schieffelin, John S; Garry, Robert F; Sabeti, Pardis C; Andersen, Kristian G

    2016-06-30

    Recent infectious disease epidemics illustrate how health systems failures anywhere can create disease vulnerabilities everywhere. We must therefore prioritize investments in health care infrastructure in outbreak-prone regions of the world. We describe how "rooted" research collaborations can establish capacity for pathogen surveillance and facilitate rapid outbreak responses. PMID:27368093

  10. Seasonal changes of whole root system conductance by a drought-tolerant grape root system

    PubMed Central

    Alsina, Maria Mar; Smart, David R.; Bauerle, Taryn; de Herralde, Felicidad; Biel, Carme; Stockert, Christine; Negron, Claudia; Save, Robert

    2011-01-01

    The role of root systems in drought tolerance is a subject of very limited information compared with above-ground responses. Adjustments to the ability of roots to supply water relative to shoot transpiration demand is proposed as a major means for woody perennial plants to tolerate drought, and is often expressed as changes in the ratios of leaf to root area (AL:AR). Seasonal root proliferation in a directed manner could increase the water supply function of roots independent of total root area (AR) and represents a mechanism whereby water supply to demand could be increased. To address this issue, seasonal root proliferation, stomatal conductance (gs) and whole root system hydraulic conductance (kr) were investigated for a drought-tolerant grape root system (Vitis berlandieri×V. rupestris cv. 1103P) and a non-drought-tolerant root system (Vitis riparia×V. rupestris cv. 101-14Mgt), upon which had been grafted the same drought-sensitive clone of Vitis vinifera cv. Merlot. Leaf water potentials (ψL) for Merlot grafted onto the 1103P root system (–0.91±0.02 MPa) were +0.15 MPa higher than Merlot on 101-14Mgt (–1.06±0.03 MPa) during spring, but dropped by approximately –0.4 MPa from spring to autumn, and were significantly lower by –0.15 MPa (–1.43±0.02 MPa) than for Merlot on 101-14Mgt (at –1.28±0.02 MPa). Surprisingly, gs of Merlot on the drought-tolerant root system (1103P) was less down-regulated and canopies maintained evaporative fluxes ranging from 35–20 mmol vine−1 s−1 during the diurnal peak from spring to autumn, respectively, three times greater than those measured for Merlot on the drought-sensitive rootstock 101-14Mgt. The drought-tolerant root system grew more roots at depth during the warm summer dry period, and the whole root system conductance (kr) increased from 0.004 to 0.009 kg MPa−1 s−1 during that same time period. The changes in kr could not be explained by xylem anatomy or conductivity changes of individual root

  11. Electrical Imaging of Roots and Trunks

    NASA Astrophysics Data System (ADS)

    Al Hagrey, S.; Werban, U.; Meissner, R.; Ismaeil, A.; Rabbel, W.

    2005-05-01

    We applied geoelectric and GPR techniques to analyze problems of botanical structures and even processes, e.g., mapping root zones, internal structure of trunks, and water uptake by roots. The dielectric nature of root zones and trunks is generally a consequence of relatively high moisture content. The electric method, applied to root zones, can discriminate between old, thick, isolated roots (high resistivity) and the network of young, active, and hydraulically conductive zones (low resistivity). Both types of roots show low radar velocity and a strong attenuation caused by the dominant effect of moisture (high dielectric constant) on the electromagnetic wave propagation. Single root branches could be observed in radargrams by their reflection and diffraction parabolas. We have perfected the inversion method for perfect and imperfect cylindrical objects, such as trunks, and developed a new multielectrodes (needle or gel) ring array for fast applications on living trees and discs. Using synthetic models we tested the technique successfully and analyzed it as a function of total electrode number and configuration. Measurements at a trunk show a well established inverse relationship between the imaged resistivity and the moisture content determined from cores. The central resistivity maximum of healthy trees strongly decreases toward the rim. This agrees with the moisture decrease to the outside where active sap flow processes take place. Branching, growth anomalies (new or old shoots) and meteorological effects (sunshine and wind direction) lead to deviations of the concentric electric structure. The strongest anomalies are related to infections causing wet, rotting spots or cavities. The heartwood resistivity is highest in olive and oak trunks, intermediate in young fruit trees and lowest in cork oak trunks that are considered to be anomalously wet. Compared to acoustic tomography our electric technique shows a better resolution in imaging internal ring structures

  12. Stimulation of adventitious rooting of Taxus species by thiamine.

    PubMed

    Chee, P P

    1995-10-01

    Results obtained from using root inducing compounds on Taxus species cuttings suggested that rooting could be significantly enhanced by the presence of thiamine. This observation was verified using a root inducing solution containing a set concentration of IBA (0.2%), NAA (0.1%), and supplemented with various concentrations of thiamine. The best rooting response for Taxus cuspidata stem cuttings was found using this solution supplemented with 0.08% thiamine. Rooted cuttings were easily established and developed into vigorous plants. In addition, Taxus brevifolia shoots obtained from tissue cultures via in vitro organogenesis also responded favorably to this 0.08% thiamine supplemented rooting solution. PMID:24186706

  13. Food reserves in mountain longleaf pine roots during shoot elongation.

    SciTech Connect

    Walkinshaw, C.H.; W.J. Otrosina

    2001-03-20

    Roots of saplings appear to be models for healthy tissues in longleaf pines. Results show that roots of mountain longleaf pine have a normal anatomy, but also have unusual amounts of starch when compared to loblolly pine roots growing during phenologiexecy equal time periods. Roots appear large in diameter and grow much nearer the soil surface than roots observed from Coastal Plain longleaf pine. Starch grains are large in size and uniformly filled root cells. These results yield methodology potentially useful in assessment of health and productivity of longleaf pine.

  14. Impact of water deficit intensity on durum wheat seminal roots.

    PubMed

    Adda, Ahmed; Sahnoune, Mohamed; Kaid-Harch, Meriem; Merah, Othmane

    2005-01-01

    Experiments were performed under controlled conditions to study seminal roots traits of durum wheat genotypes grown under four water conditions. Seminal root length, root-to-shoot dry matters ratio and piliferous layer cell size were measured. Root volume was assessed at three soil depths. Water stress has affected significantly root traits and piliferous layer cell size and this impact depends on its intensity. Severe water stress reduced markedly root traits. Water treatment by genotype interaction was observed. Middle-East genotypes responded differently from Algerian ones. Our results and those obtained elsewhere on the same genotypes for other physiological traits are discussed.

  15. The role of roots in sex expression in hemp plants.

    PubMed

    Chailakhyan, M K; Khryanin, V N

    1978-01-01

    When the shoots of young hemp (Cannabis sativa L.) plants were cut off the roots, cultured as cuttings, and regenerating (adventitious) roots were removed as soon as appearing, ca. 80-90% of the plants became male (had staminate flowers) whereas if the roots were allowed to develop a similar percentage became female (pistillate flowers). Treatment of de-rooted cuttings with 6-benzylaminopurine (15 mg/l) restored the percent of female plants to ca. 80. It is suggested that the root system plays an essential role in sex expression in hemp and that this role is related to cytokinin synthesis in the root.

  16. On the origins of dorsal root potentials.

    PubMed

    LLOYD, D P C; McINTYRE, A K

    1949-03-20

    The "dorsal root potential" consists of five successive deflections designated for convenience, D.R.I, II, III, IV, and V. Of these, D.R.V alone constitutes the dorsal root potential of prior description. A study has been made of the general properties of those deflections not previously described. Dorsal root potentials are electrotonic extensions into the extramedullary root segment, the result of electrical interactions within the cord comparable to those that have been studied in peripheral nerve. Although the anatomical and electrical conditions of interaction are infinitely more complex in the cord than in nerve, it is seen that the fact of parallel distribution of primary afferent fibers pertaining to neighboring dorsal roots provides a sufficient anatomical basis for qualitative analysis in the first approximation of dorsal root potentials. An extension of the theory of interaction between neighboring nerve fibers has been made to include an especial case of interaction between fibers orientated at right angles to one another. The predictions have been tested in a nerve model and found correct. Given this elaboration, and the stated anatomical propositions, existing knowledge of interaction provides an adequate theoretical basis for an elementary understanding of dorsal root potentials. The study of general properties and the analysis of dorsal root potentials have led to the formulation of certain conclusions that follow. D.R.I, II, and III record the electrotonic spread of polarization resulting from the external field of impulses conducted in the intramedullary segment and longitudinal trajects of primary afferent fibers. D.R.IV arises in part as the result of activity in primary afferent fibers, and in part as the result of activity in secondary neurons. In either case the mode of production is the same, and the responsible agent is residual negativity in the active collaterals, or, more precisely, the external field of current flow about the

  17. Genetic variation in rooting ability of loblolly pine cuttings: effects of auxin and family on rooting by hypocotyl cuttings.

    PubMed

    Greenwood, M S; Weir, R J

    1995-01-01

    After about 20 days, hypocotyl cuttings from 20-day-old loblolly pine (Pinus taeda L.) seedlings rooted easily in the presence of the auxin indole-3-butyric acid (IBA), with roots forming directly from xylem parenchyma. In contrast, woody cuttings from 1-2-year-old hedged seedlings formed roots indirectly from callus tissue in 60-90 days, but IBA had little effect on rooting. Variation in rooting among hypocotyls from both half- and full-sib families was highly significant in response to IBA, and rooting did not occur within 20 days unless IBA was applied. Hypocotyls from poor rooting families tended to produce fewer roots per cutting than hypocotyls from good rooting families. Rooting by woody cuttings and hypocotyl cuttings from the same nine full-sib families was weakly correlated, raising the possibility that at least some common genetically controlled processes were affecting rooting by both types of cutting. The phytotropin N-1-naphthylphthalamic acid (NPA), supplied at 1 micro M with 10 micro M IBA, significantly inhibited rooting by hypocotyl cuttings from both good and poor rooting families, but there was no significant family x treatment interaction. Family variation in rooting ability may be a function of the frequency of occurrence of auxin-responsive cells in the hypocotyls. PMID:14966010

  18. Quantitative trait loci for root-penetration ability and root thickness in rice: comparison of genetic backgrounds.

    PubMed

    Zheng, H G; Babu, R C; Pathan, M S; Ali, L; Huang, N; Courtois, B; Nguyen, H T

    2000-02-01

    Drought is the major abiotic stress limiting rice (Oryza sativa) production and yield stability in rainfed lowland and upland ecosystems. Root systems play an important role in drought resistance. Incorporation of root selection criteria in drought resistance improvement is difficult due to lack of reliable and efficient screening techniques. Using a wax-petrolatum layer system simulated to compacted soil layers, root traits were evaluated in a doubled haploid (DH) population derived from the cross between 'IR64' and 'Azucena'. Twelve putative QTLs (quantitative trait loci) were detected by interval mapping comprising four QTLs for root-penetration ability, four QTLs for root thickness, two QTLs for penetrated root number, and two QTLs for total root number. These QTLs individually explained 8.4% to 16.4% of the phenotypic variation. No QTL was detected for maximum penetrated root length by interval mapping. One QTL located between RG104 and RG348 was found to influence both root-penetration ability and root thickness. QTLs for root-penetration ability and root thickness were compared across two populations, 'IR64'-'Azucena' and 'CO39'-'Moroberekan', and different testing conditions. The identified consistent QTLs could be used for marker-assisted selection for deep and thick roots with high root-penetration ability in rice.

  19. Root-soil friction: quantification provides evidence for measurable benefits for manipulation of root-tip traits.

    PubMed

    McKenzie, Blair M; Mullins, Christopher E; Tisdall, Judith M; Bengough, A Glyn

    2013-06-01

    To penetrate soil, a root requires pressure both to expand the cavity it is to occupy, σn , and to overcome root-soil friction, σf . Difficulties in estimating these two pressures independently have limited our ability to estimate the coefficient of soil-root friction, μsr . We used a rotated penetrometer probe, of similar dimensions to a root, and for the first time entering the soil at a similar rate to a root tip, to estimate σn . Separately we measured root penetration resistance (PR) Qr . Root PR was between two to four times σn . We estimated that the coefficient of root-soil friction (μsr ) was 0.21-0.26, based on the geometry of the root tip. This is slightly larger than the 0.05-0.15 characteristic of boundary lubricants. Scanning electron microscopy showed that turgid border cells lined the root channel, supporting our hypothesis that the lubricant consisted of mucilage sandwiched between border cells and the surface of the root cap and epidermis. This cell-cell lubrication greatly decreased the friction that would otherwise be experienced had the surface of the root proper slid directly past unlubricated soil particles. Because root-soil friction can be a substantial component of root PR, successful manipulation of friction represents a promising opportunity for improving plant performance.

  20. Root cap-dependent gravitropic U-turn of maize root requires light-induced auxin biosynthesis via the YUC pathway in the root apex

    PubMed Central

    Suzuki, Hiromi; Yokawa, Ken; Nakano, Sayuri; Yoshida, Yuriko; Fabrissin, Isabelle; Okamoto, Takashi; Baluška, František; Koshiba, Tomokazu

    2016-01-01

    Gravitropism refers to the growth or movement of plants that is influenced by gravity. Roots exhibit positive gravitropism, and the root cap is thought to be the gravity-sensing site. In some plants, the root cap requires light irradiation for positive gravitropic responses. However, the mechanisms regulating this phenomenon are unknown. We herein report that maize roots exposed to white light continuously for ≥1–2h show increased indole-3-acetic acid (IAA) levels in the root tips, especially in the transition zone (1–3mm from the tip). Treatment with IAA biosynthesis inhibitors yucasin and l-kynurenine prevented any increases in IAA content and root curvature under light conditions. Analyses of the incorporation of a stable isotope label from tryptophan into IAA revealed that some of the IAA in roots was synthesized in the root apex. Furthermore, Zmvt2 and Zmyuc gene transcripts were detected in the root apex. One of the Zmyuc genes (ZM2G141383) was up-regulated by light irradiation in the 0–1mm tip region. Our findings suggest that IAA accumulation in the transition zone is due to light-induced activation of Zmyuc gene expression in the 0–1mm root apex region. Light-induced changes in IAA levels and distributions mediate the maize root gravitropic U-turn. PMID:27307546

  1. Root cap-dependent gravitropic U-turn of maize root requires light-induced auxin biosynthesis via the YUC pathway in the root apex.

    PubMed

    Suzuki, Hiromi; Yokawa, Ken; Nakano, Sayuri; Yoshida, Yuriko; Fabrissin, Isabelle; Okamoto, Takashi; Baluška, František; Koshiba, Tomokazu

    2016-08-01

    Gravitropism refers to the growth or movement of plants that is influenced by gravity. Roots exhibit positive gravitropism, and the root cap is thought to be the gravity-sensing site. In some plants, the root cap requires light irradiation for positive gravitropic responses. However, the mechanisms regulating this phenomenon are unknown. We herein report that maize roots exposed to white light continuously for ≥1-2h show increased indole-3-acetic acid (IAA) levels in the root tips, especially in the transition zone (1-3mm from the tip). Treatment with IAA biosynthesis inhibitors yucasin and l-kynurenine prevented any increases in IAA content and root curvature under light conditions. Analyses of the incorporation of a stable isotope label from tryptophan into IAA revealed that some of the IAA in roots was synthesized in the root apex. Furthermore, Zmvt2 and Zmyuc gene transcripts were detected in the root apex. One of the Zmyuc genes (ZM2G141383) was up-regulated by light irradiation in the 0-1mm tip region. Our findings suggest that IAA accumulation in the transition zone is due to light-induced activation of Zmyuc gene expression in the 0-1mm root apex region. Light-induced changes in IAA levels and distributions mediate the maize root gravitropic U-turn. PMID:27307546

  2. Metabolic transition in mycorrhizal tomato roots

    PubMed Central

    Rivero, Javier; Gamir, Jordi; Aroca, Ricardo; Pozo, María J.; Flors, Víctor

    2015-01-01

    Beneficial plant–microorganism interactions are widespread in nature. Among them, the symbiosis between plant roots and arbuscular mycorrhizal fungi (AMF) is of major importance, commonly improving host nutrition and tolerance against environmental and biotic challenges. Metabolic changes were observed in a well-established symbiosis between tomato and two common AMF: Rhizophagus irregularis and Funneliformis mosseae. Principal component analysis of metabolites, determined by non-targeted liquid chromatography–mass spectrometry, showed a strong metabolic rearrangement in mycorrhizal roots. There was generally a negative impact of mycorrhizal symbiosis on amino acid content, mainly on those involved in the biosynthesis of phenylpropanoids. On the other hand, many intermediaries in amino acid and sugar metabolism and the oxylipin pathway were among the compounds accumulating more in mycorrhizal roots. The metabolic reprogramming also affected other pathways in the secondary metabolism, mainly phenyl alcohols (lignins and lignans) and vitamins. The results showed that source metabolites of these pathways decreased in mycorrhizal roots, whilst the products derived from α-linolenic and amino acids presented higher concentrations in AMF-colonized roots. Mycorrhization therefore increased the flux into those pathways. Venn-diagram analysis showed that there are many induced signals shared by both mycorrhizal interactions, pointing to general mycorrhiza-associated changes in the tomato metabolome. Moreover, fungus-specific fingerprints were also found, suggesting that specific molecular alterations may underlie the reported functional diversity of the symbiosis. Since most positively regulated pathways were related to stress response mechanisms, their potential contribution to improved host stress tolerance is discussed. PMID:26157423

  3. Numerical and Experimental Investigation on Root Anchorage

    NASA Astrophysics Data System (ADS)

    Ali, F.; Osman, N.; Hashim, R.; Khalilnejad, A.

    2012-04-01

    In more recent times, the roles played by vegetation in some specific geotechnical processes have been recognized. Vegetation may affect slope stability in many ways. The stability of slopes is governed by the load, which is the driving force that causes failure, and the resistance, which is the strength of the soil-root system. The weight of trees growing on a slope adds to the load but the roots of trees serve as a soil reinforcement and increase the resistance. In order to ensure that the weight of the trees on the slope help to enhance its stability it is required that they are planted down-slope of the neutral point. Maximum contribution is produced if the trees are located at the slope toe. Considering a typical slip circle, at this location the direction of shear force acting on the trees may be considered as close-to-vertical for the purpose of analysis. In this study, 3D numerical simulations of root anchorage have been performed to study the mechanism and the factors influencing the pull out capacity of tree roots. The investigation was performed using ABACUS finite element program. Field pull-out tests were also carried out on Melastoma malabathricum which been shown to be very suitable to be grown on slope, and the results are compared with numerical simulations. Parametric studies were also done to study the effects of factors such as root pattern, angle of inclination as well as soil properties. The results show that the 3D finite element analyses are able to approximately simulate the experimental tests. The results of the field tests, simulations and the parametric studies will be presented and discussed in more details in this paper.

  4. Metabolic transition in mycorrhizal tomato roots.

    PubMed

    Rivero, Javier; Gamir, Jordi; Aroca, Ricardo; Pozo, María J; Flors, Víctor

    2015-01-01

    Beneficial plant-microorganism interactions are widespread in nature. Among them, the symbiosis between plant roots and arbuscular mycorrhizal fungi (AMF) is of major importance, commonly improving host nutrition and tolerance against environmental and biotic challenges. Metabolic changes were observed in a well-established symbiosis between tomato and two common AMF: Rhizophagus irregularis and Funneliformis mosseae. Principal component analysis of metabolites, determined by non-targeted liquid chromatography-mass spectrometry, showed a strong metabolic rearrangement in mycorrhizal roots. There was generally a negative impact of mycorrhizal symbiosis on amino acid content, mainly on those involved in the biosynthesis of phenylpropanoids. On the other hand, many intermediaries in amino acid and sugar metabolism and the oxylipin pathway were among the compounds accumulating more in mycorrhizal roots. The metabolic reprogramming also affected other pathways in the secondary metabolism, mainly phenyl alcohols (lignins and lignans) and vitamins. The results showed that source metabolites of these pathways decreased in mycorrhizal roots, whilst the products derived from α-linolenic and amino acids presented higher concentrations in AMF-colonized roots. Mycorrhization therefore increased the flux into those pathways. Venn-diagram analysis showed that there are many induced signals shared by both mycorrhizal interactions, pointing to general mycorrhiza-associated changes in the tomato metabolome. Moreover, fungus-specific fingerprints were also found, suggesting that specific molecular alterations may underlie the reported functional diversity of the symbiosis. Since most positively regulated pathways were related to stress response mechanisms, their potential contribution to improved host stress tolerance is discussed. PMID:26157423

  5. Root Induced Heterogeneity In Agricultural Soils

    NASA Astrophysics Data System (ADS)

    Gomes, C.; Gabai, R.; Weisbrod, N.; Furman, A.

    2012-12-01

    In this study we investigate the role of plant induced heterogeneity on water dynamics in agricultural soils. We conducted three experiments in two sites (one still ongoing) in which a trench was excavated in the root zone of an orchard and the subsurface, to a depth of over 1 m, was instrumented in high resolution with water content, water potential and temperature sensors. High temporal resolution monitoring of soil state was carried for over a year, period that included natural (Mediterranean) climate boundary forcing. In addition, sprinkler, flood, and spray irrigation boundary conditions were forced for short time periods to explore the infiltration process under these conditions. One site was an Avocado orchard planted in red sandy soil while the other, still on-going, is in a grape vineyards irrigated by tap and treated wastewater, planted over alluvial clayey soil. In the vineyard, we are comparing soil irrigated with fresh water to soil irrigated with treated waste water for more than 10 years. Our preliminary results indicate several interesting phenomena. First, the role of plant roots is clearly seen as the major roots act as a conduit for water (and solute), providing a fast bypass of the upper soil. Further, we identified different regions of the subsurface that apparently were of the same texture, but in practice presented very different hydraulic properties. Second, the role of these roots depends on the boundary conditions. That is, the root bypass acts differently when soil is flooded than when flow is strictly unsaturated. As expected, simulation of the experimental results show good fit only if the domain heterogeneity of soil properties was incorporated. Results for the clayey soils were not available at time of abstract submission.

  6. Water deficit during root development: effects on the growth of roots and osmotic water permeability of isolated root protoplasts.

    PubMed

    Morillon, Raphaël; Lassalles, Jean-Paul

    2002-01-01

    The effect of low water potentials on root growth of flax (Linum usitatissimum L. cv. Ariane), rape (Brassica napus L. de Candolle, cv. Bristol), hard wheat (Triticum turgidum L. cv. Cham1) and soft wheat (Triticum aestivum L. cv. Ritmo) was studied by measuring the osmotic water permeability (Pos) of root protoplasts and the protein abundance of PIP1 and PIP2 aquaporins. These different species require more or less water, the most sensitive to water deficit being flax and rape. Ritmo, is a cultivar of wheat adapted to temperate zones, while the other cultivar Cham1 is adapted to low-rainfall areas. The seedlings were germinated and grown in water, salt or sugar solutions at different water potentials. The values of Pos for flax, rape and Chaml wheat were normally distributed and could be characterized by mean +/- SD. Root protoplasts from water-grown seedlings had Pos values of 485+/-159 microm s(-1) (flax), 582+/-100 microm s(-1) (rape), and 6.3+/-3.5 microm s(-1) (Cham1). At the same age, the protoplasts from Ritmo exhibited a much wider range of values than the protoplasts of Cham1. When seedlings were grown under conditions of osmotic or salt stress, the mass of the roots was reduced for all species. With 0.25 mol kg(-1) sorbitol or 0.125 M NaCl, the Pos for flax, rape and Cham1 remained constant or slightly increased, while for Ritmo the reduction in the mass of the roots was paralleled by a reduction in Pos. Only Cham1 and Ritmo were able to germinate at a lower potential (0.5 mol kg(-1) sorbitol). For Ritmo the reduction in the mass of the roots was paralleled by a reduction in Pos when grown in this stress condition and both wheats exhibited low Pos values. The expression of the PIP1 and PIP2 aquaporins families was also studied by immunoblotting. We did not observe any difference in protein expression for any of the species, whatever the growing conditions. We suggest that the high Pos values for flax and rape could play a role in the sensitivity of these

  7. Estimation of fine-root production using rates of diameter-dependent root mortality, decomposition and thickening in forests.

    PubMed

    Van Do, Tran; Osawa, Akira; Sato, Tamotsu

    2016-04-01

    Current studies indicate that fine roots of different diameter classes show different rates of decomposition. This study developed a new method to estimate fine-root production by considering the difference in the production of fine roots of two size classes, fine roots thinner than 1 mm and those between 1 and 2 mm, and their corresponding rates of decomposition. A litter bag experiment was used to estimate the decomposition rates, while the sequential soil core technique was used to identify mass values of live roots and dead roots at a given period of observation. The continuous inflow method was applied to estimate the amount of root decomposition, mortality and production with a framework of two diameter classes of fine roots and for quantification of the amount of mass transfer from the thicker fine-root class to the coarser root category (>2 mm). The results indicated that the estimate of fine-root production was greater when two size classes of fine roots were distinguished. Using a framework of two size classes developed in this study resulted in 21.3% higher fine-root production than a method that did not recognize fine-root size classes or mass transfer to the category of coarse roots. In addition, using shorter collection intervals led to higher production estimates than longer intervals. The production estimate with a 1-month interval was 21.4% higher than that with a 6-month interval. We consider that the use of the sequential soil core technique with continuous inflow estimate method by differentiating size classes of fine roots is likely to minimize the underestimation of the parameters of fine-root dynamics by accounting for decomposition and mortality of fine roots more appropriately.

  8. The effect of root preparation technique and instrumentation length on the development of apical root cracks.

    PubMed

    Adorno, Carlos G; Yoshioka, Takatomo; Suda, Hideaki

    2009-03-01

    The purpose of this study was to compare the effects of root canal preparation techniques and instrumentation length on the development of apical root cracks. Forty extracted mandibular premolars with straight roots were randomly selected and mounted on resin blocks with simulated periodontal ligaments, and the apex was exposed. The teeth were divided into four groups of 10 teeth each for different canal preparation techniques and instrumentation lengths: group A: step-back preparation (SB) with stainless steel files (SF) using root canal length (RCL) to guide instrumentation length; group B: SB using RCL - 1 mm; group C: crown-down preparation (CD) with Profile using RCL; and group D: CD with PF using RCL - 1 mm. Digital images of the instrumentation sequence were compared for each tooth. Statistical analysis revealed a significant effect of instrumentation length (p < 0.05) but no significant effect of preparation technique (p > 0.05) on the development of apical cracks.

  9. Root traits contributing to plant productivity under drought.

    PubMed

    Comas, Louise H; Becker, Steven R; Cruz, Von Mark V; Byrne, Patrick F; Dierig, David A

    2013-11-05

    Geneticists and breeders are positioned to breed plants with root traits that improve productivity under drought. However, a better understanding of root functional traits and how traits are related to whole plant strategies to increase crop productivity under different drought conditions is needed. Root traits associated with maintaining plant productivity under drought include small fine root diameters, long specific root length, and considerable root length density, especially at depths in soil with available water. In environments with late season water deficits, small xylem diameters in targeted seminal roots save soil water deep in the soil profile for use during crop maturation and result in improved yields. Capacity for deep root growth and large xylem diameters in deep roots may also improve root acquisition of water when ample water at depth is available. Xylem pit anatomy that makes xylem less "leaky" and prone to cavitation warrants further exploration holding promise that such traits may improve plant productivity in water-limited environments without negatively impacting yield under adequate water conditions. Rapid resumption of root growth following soil rewetting may improve plant productivity under episodic drought. Genetic control of many of these traits through breeding appears feasible. Several recent reviews have covered methods for screening root traits but an appreciation for the complexity of root systems (e.g., functional differences between fine and coarse roots) needs to be paired with these methods to successfully identify relevant traits for crop improvement. Screening of root traits at early stages in plant development can proxy traits at mature stages but verification is needed on a case by case basis that traits are linked to increased crop productivity under drought. Examples in lesquerella (Physaria) and rice (Oryza) show approaches to phenotyping of root traits and current understanding of root trait genetics for breeding.

  10. Root traits contributing to plant productivity under drought

    PubMed Central

    Comas, Louise H.; Becker, Steven R.; Cruz, Von Mark V.; Byrne, Patrick F.; Dierig, David A.

    2013-01-01

    Geneticists and breeders are positioned to breed plants with root traits that improve productivity under drought. However, a better understanding of root functional traits and how traits are related to whole plant strategies to increase crop productivity under different drought conditions is needed. Root traits associated with maintaining plant productivity under drought include small fine root diameters, long specific root length, and considerable root length density, especially at depths in soil with available water. In environments with late season water deficits, small xylem diameters in targeted seminal roots save soil water deep in the soil profile for use during crop maturation and result in improved yields. Capacity for deep root growth and large xylem diameters in deep roots may also improve root acquisition of water when ample water at depth is available. Xylem pit anatomy that makes xylem less “leaky” and prone to cavitation warrants further exploration holding promise that such traits may improve plant productivity in water-limited environments without negatively impacting yield under adequate water conditions. Rapid resumption of root growth following soil rewetting may improve plant productivity under episodic drought. Genetic control of many of these traits through breeding appears feasible. Several recent reviews have covered methods for screening root traits but an appreciation for the complexity of root systems (e.g., functional differences between fine and coarse roots) needs to be paired with these methods to successfully identify relevant traits for crop improvement. Screening of root traits at early stages in plant development can proxy traits at mature stages but verification is needed on a case by case basis that traits are linked to increased crop productivity under drought. Examples in lesquerella (Physaria) and rice (Oryza) show approaches to phenotyping of root traits and current understanding of root trait genetics for breeding

  11. Domestication and Crop Physiology: Roots of Green-Revolution Wheat

    PubMed Central

    Waines, J. Giles; Ehdaie, Bahman

    2007-01-01

    Background and Aims Most plant scientists, in contrast to animal scientists, study only half the organism, namely above-ground stems, leaves, flowers and fruits, and neglect below-ground roots. Yet all acknowledge roots are important for anchorage, water and nutrient uptake, and presumably components of yield. This paper investigates the relationship between domestication, and the root systems of landraces, and the parents of early, mid- and late green-revolution bread wheat cultivars. It compares the root system of bread wheat and ‘Veery’-type wheat containing the 1RS translocation from rye. Methods Wheat germplasm was grown in large pots in sand culture in replicated experiments. This allowed roots to be washed free to study root characters. Key Results The three bread wheat parents of early green-revolution wheats have root biomass less than two-thirds the mean of some landrace wheats. Crossing early green-revolution wheat to an F2 of ‘Norin 10’ and ‘Brevor’, further reduced root biomass in mid-generation semi-dwarf and dwarf wheats. Later-generation semi-dwarf wheats show genetic variation for root biomass, but some exhibit further reduction in root size. This is so for some California and UK wheats. The wheat–rye translocation in ‘Kavkaz’ for the short arm of chromosome 1 (1RS) increased root biomass and branching in cultivars that contained it. Conclusions Root size of modern cultivars is small compared with that of landraces. Their root system may be too small for optimum uptake of water and nutrients and maximum grain yield. Optimum root size for grain yield has not been investigated in wheat or most crop plants. Use of 1RS and similar alien translocations may increase root biomass and grain yield significantly in irrigated and rain-fed conditions. Root characters may be integrated into components of yield analysis in wheat. Plant breeders may need to select directly for root characters. PMID:17940075

  12. 1-Aminocyclopropane-1-carboxylic acid (ACC) concentration and ACC synthase expression in soybean roots, root tips, and soybean cyst nematode (Heterodera glycines)-infected roots.

    PubMed

    Tucker, Mark L; Xue, Ping; Yang, Ronghui

    2010-01-01

    Colonization of plant roots by root knot and cyst nematodes requires a functional ethylene response pathway. However, ethylene plays many roles in root development and whether its role in nematode colonization is direct or indirect, for example lateral root initiation or root hair growth, is not known. The temporal requirement for ethylene and localized synthesis of ethylene during the life span of soybean cyst nematode (SCN) on soybean roots was further investigated. Although a significant increase in ethylene evolution was not detected from SCN-colonized roots, the concentration of the immediate precursor to ethylene, 1-aminocyclopropane-1-carboxylic acid (ACC), was higher in SCN-colonized root pieces and root tips than in other parts of the root. Moreover, expression analysis of 17 ACC synthase (ACS) genes indicated that a select set of ACS genes is expressed in SCN-colonized root pieces that is clearly different from the set of genes expressed in non-colonized roots or root tips. Semi-quantitative real-time PCR indicated that ACS transcript accumulation correlates with the high concentration of ACC in root tips. In addition, an ACS-like sequence was found in the public SCN nucleotide database. Acquisition of a full-length sequence for this mRNA (accession GQ389647) and alignment with transcripts for other well-characterized ACS proteins indicated that the nematode sequence is missing a key element required for ACS activity and therefore probably is not a functional ACS. Moreover, no significant amount of ACC was found in any growth stage of SCN that was tested.

  13. Plant roots and spectroscopic methods - analyzing species, biomass and vitality.

    PubMed

    Rewald, Boris; Meinen, Catharina

    2013-01-01

    In order to understand plant functioning, plant community composition, and terrestrial biogeochemistry, it is decisive to study standing root biomass, (fine) root dynamics, and interactions belowground. While most plant taxa can be identified by visual criteria aboveground, roots show less distinctive features. Furthermore, root systems of neighboring plants are rarely spatially segregated; thus, most soil horizons and samples hold roots of more than one species necessitating root sorting according to taxa. In the last decades, various approaches, ranging from anatomical and morphological analyses to differences in chemical composition and DNA sequencing were applied to discern species' identity and biomass belowground. Among those methods, a variety of spectroscopic methods was used to detect differences in the chemical composition of roots. In this review, spectroscopic methods used to study root systems of herbaceous and woody species in excised samples or in situ will be discussed. In detail, techniques will be reviewed according to their usability to discern root taxa, to determine root vitality, and to quantify root biomass non-destructively or in soil cores holding mixtures of plant roots. In addition, spectroscopic methods which may be able to play an increasing role in future studies on root biomass and related traits are highlighted.

  14. Desirable plant root traits for protecting unstable slopes against landslides

    NASA Astrophysics Data System (ADS)

    Stokes, A.; Atger, C.; Bengough, G.; Fourcaud, T.; Sidle, R. C.

    2009-04-01

    A trait is defined as a distinct, quantitative property of organisms, usually measured at the individual level and used comparatively across species. Plant quantitative traits are extremely important for understanding the local ecology of any site. Plant height, architecture, root depth, wood density, leaf size and leaf nitrogen concentration control ecosystem processes and define habitat for other taxa. An engineer conjecturing as to how plant traits may directly influence physical processes occurring on sloping land just needs to consider how e.g. canopy architecture and litter properties influence the partitioning of rainfall among interception loss, infiltration and runoff. Plant traits not only influence abiotic processes occurring at a site, but also the habitat for animals and invertebrates. Depending on the goal of the landslide engineer, the immediate and long-term effects of plant traits in an environment must be considered if a site is to remain viable and ecologically successful. When vegetation is considered in models of slope stability, usually the only root parameters taken into consideration are tensile strength and root area ratio. Root system spatial structure is not considered, although the length, orientation and diameter of roots are recognized as being of importance. Thick roots act like soil nails on slopes, reinforcing soil in the same way that concrete is reinforced with steel rods. The spatial position of these thick roots also has an indirect effect on soil fixation in that the location of thin and fine roots will depend on the arrangement of thick roots. Thin and fine roots act in tension during failure on slopes and if they cross the slip surface, are largely responsible for reinforcing soil on slopes. Therefore, the most important trait to consider initially is rooting depth. To stabilize a slope against a shallow landslide, roots must cross the shear surface. The number and thickness of roots in this zone will therefore largely

  15. Amyloplast Distribution Directs a Root Gravitropic Reaction

    NASA Astrophysics Data System (ADS)

    Kordyum, Elizabeth

    Immobile higher plants are oriented in the gravitational field due to gravitropim that is a physiological growth reaction and consists of three phases: reception of a gravitational signal by statocytes, its transduction to the elongation zone, and finally the organ bending. As it is known, roots are characterized with positive gravitropism, i. e. they grow in the direction of a gravitational vector, stems - with negative gravitropism, i. e. they grow in the direction opposite to a gravitational vector. According to the Nemec’s and Haberlandt’s starch-statolith hypothesis, amyloplasts in diameter of 1.5 - 3 μ in average, which appear to act as gravity sensors and fulfill a statolythic function in the specialized graviperceptive cells - statocytes, sediment in the direction of a gravitational vector in the distal part of a cell, while a nucleus is in the proximal one. There are reasonable data that confirm the amyloplasts-statoliths participation in gravity perception: 1) correlation between the statoliths localization and the site of gravity sensing, 2) significant redistribution (sedimentation) of amyloplasts in statocytes under gravistimulation in comparison with other cell organelles, 3) root decreased ability to react on gravity under starch removal from amyloplasts, 4) starchless Arabidopsis thaliana mutants are agravitropic, 5) amyloplasts-statoliths do not sediment in the absence of the gravitational vector and are in different parts or more concentrated in the center of statocytes. Plant tropisms have been intensively studied for many decades and continue to be investigated. Nevertheless, the mechanisms by which plants do so is still not clearly explained and many questions on gravisensing and graviresponse remain unanswered. Even accepted hypotheses are now being questioned and recent data are critically evaluated. Although the available data show the Ca2+ and cytoskeleton participation in graviperception and signal transduction, the clear evidence

  16. Amyloplast Distribution Directs a Root Gravitropic Reaction

    NASA Astrophysics Data System (ADS)

    Kordyum, Elizabeth

    Immobile higher plants are oriented in the gravitational field due to gravitropim that is a physiological growth reaction and consists of three phases: reception of a gravitational signal by statocytes, its transduction to the elongation zone, and finally the organ bending. As it is known, roots are characterized with positive gravitropism, i. e. they grow in the direction of a gravitational vector, stems - with negative gravitropism, i. e. they grow in the direction opposite to a gravitational vector. According to the Nemec’s and Haberlandt’s starch-statolith hypothesis, amyloplasts in diameter of 1.5 - 3 μ in average, which appear to act as gravity sensors and fulfill a statolythic function in the specialized graviperceptive cells - statocytes, sediment in the direction of a gravitational vector in the distal part of a cell, while a nucleus is in the proximal one. There are reasonable data that confirm the amyloplasts-statoliths participation in gravity perception: 1) correlation between the statoliths localization and the site of gravity sensing, 2) significant redistribution (sedimentation) of amyloplasts in statocytes under gravistimulation in comparison with other cell organelles, 3) root decreased ability to react on gravity under starch removal from amyloplasts, 4) starchless Arabidopsis thaliana mutants are agravitropic, 5) amyloplasts-statoliths do not sediment in the absence of the gravitational vector and are in different parts or more concentrated in the center of statocytes. Plant tropisms have been intensively studied for many decades and continue to be investigated. Nevertheless, the mechanisms by which plants do so is still not clearly explained and many questions on gravisensing and graviresponse remain unanswered. Even accepted hypotheses are now being questioned and recent data are critically evaluated. Although the available data show the Ca2+ and cytoskeleton participation in graviperception and signal transduction, the clear evidence

  17. Intensity of hydrostimulation for the induction of root hydrotropism and its sensing by the root cap

    NASA Technical Reports Server (NTRS)

    Takahashi, H.; Scott, T. K.

    1993-01-01

    Roots of Pisum sativum L. and Zea mays L. were exposed to different moisture gradients established by placing both wet cheesecloth (hydrostimulant) and saturated aqueous solutions of various salts in a closed chamber. Atmospheric conditions with different relative humidity (RH) in a range between 98 and 86% RH were obtained at root level, 2 to 3mm from the water-saturated hydrostimulant. Roots of Silver Queen corn placed vertically with the tips down curved sideways toward the hydrostimulant in response to approximately 94% RH but did not respond positively to RH higher than approximately 95%. The positive hydrotropic response increased linearly as RH was lowered from 95 to 90%. A maximum response was observed at RH between 90 and 86%. However, RH required for the induction of hydrotropism as well as the responsiveness differed among plant species used; gravitropically sensitive roots appeared to require a somewhat greater moisture gradient for the induction of hydrotropism. Decapped roots of corn failed to curve hydrotropically, suggesting the root cap as a major site of hydrosensing.

  18. Intensity of hydrostimulation for the induction of root hydrotropism and its sensing by the root cap.

    PubMed

    Takahashi, H; Scott, T K

    1993-01-01

    Roots of Pisum sativum L. and Zea mays L. were exposed to different moisture gradients established by placing both wet cheesecloth (hydrostimulant) and saturated aqueous solutions of various salts in a closed chamber. Atmospheric conditions with different relative humidity (RH) in a range between 98 and 86% RH were obtained at root level, 2 to 3mm from the water-saturated hydrostimulant. Roots of Silver Queen corn placed vertically with the tips down curved sideways toward the hydrostimulant in response to approximately 94% RH but did not respond positively to RH higher than approximately 95%. The positive hydrotropic response increased linearly as RH was lowered from 95 to 90%. A maximum response was observed at RH between 90 and 86%. However, RH required for the induction of hydrotropism as well as the responsiveness differed among plant species used; gravitropically sensitive roots appeared to require a somewhat greater moisture gradient for the induction of hydrotropism. Decapped roots of corn failed to curve hydrotropically, suggesting the root cap as a major site of hydrosensing. PMID:11538001

  19. Flavonoids modify root growth and modulate expression of SHORT-ROOT and HD-ZIP III.

    PubMed

    Franco, Danilo Miralha; Silva, Eder Marques; Saldanha, Luiz Leonardo; Adachi, Sérgio Akira; Schley, Thayssa Rabelo; Rodrigues, Tatiane Maria; Dokkedal, Anne Ligia; Nogueira, Fabio Tebaldi Silveira; Rolim de Almeida, Luiz Fernando

    2015-09-01

    Flavonoids are a class of distinct compounds produced by plant secondary metabolism that inhibit or promote plant development and have a relationship with auxin transport. We showed that, in terms of root development, Copaifera langsdorffii leaf extracts has an inhibitory effect on most flavonoid components compared with the application of exogenous flavonoids (glycosides and aglycones). These compounds alter the pattern of expression of the SHORT-ROOT and HD-ZIP III transcription factor gene family and cause morpho-physiological alterations in sorghum roots. In addition, to examine the flavonoid auxin interaction in stress, we correlated the responses with the effects of exogenous application of auxin and an auxin transport inhibitor. The results show that exogenous flavonoids inhibit primary root growth and increase the development of lateral roots. Exogenous flavonoids also change the pattern of expression of specific genes associated with root tissue differentiation. These findings indicate that flavonoid glycosides can influence the polar transport of auxin, leading to stress responses that depend on auxin.

  20. Root hair-specific EXPANSIN A7 is required for root hair elongation in Arabidopsis.

    PubMed

    Lin, Changfa; Choi, Hee-Seung; Cho, Hyung-Taeg

    2011-04-01

    Expansins are non-hydrolytic cell wall-loosening proteins that are involved in the cell wall modifications that underlie many plant developmental processes. Root hair growth requires the accumulation of cell wall materials and dynamic cell wall modification at the tip region. Although several lines of indirect evidence support the idea that expansin-mediated wall modification occurs during root hair growth, the involvement of these proteins remains to be demonstrated in vivo. In this study, we used RNA interference (RNAi) to examine the biological function of Arabidopsis thaliana EXPANSIN A7 (AtEXPA7), which is expressed specifically in the root hair cell. The root hairspecific AtEXPA7 promoter was used to drive RNAi expression, which targeted two independent regions in the AtEXPA7 transcript. Quantitative reverse transcriptase-PCR analyses were used to examine AtEXPA7 transcript levels. In four independent RNAi transformant lines, RNAi expression reduced AtEXPA7 transcript levels by 25-58% compared to controls. Accordingly, the root hairs of RNAi transformant lines were 25-48% shorter than control plants and exhibited a broader range of lengths than the controls. Our results provide in vivo evidence that expansins are required for root hair tip growth.

  1. Flavonoids modify root growth and modulate expression of SHORT-ROOT and HD-ZIP III.

    PubMed

    Franco, Danilo Miralha; Silva, Eder Marques; Saldanha, Luiz Leonardo; Adachi, Sérgio Akira; Schley, Thayssa Rabelo; Rodrigues, Tatiane Maria; Dokkedal, Anne Ligia; Nogueira, Fabio Tebaldi Silveira; Rolim de Almeida, Luiz Fernando

    2015-09-01

    Flavonoids are a class of distinct compounds produced by plant secondary metabolism that inhibit or promote plant development and have a relationship with auxin transport. We showed that, in terms of root development, Copaifera langsdorffii leaf extracts has an inhibitory effect on most flavonoid components compared with the application of exogenous flavonoids (glycosides and aglycones). These compounds alter the pattern of expression of the SHORT-ROOT and HD-ZIP III transcription factor gene family and cause morpho-physiological alterations in sorghum roots. In addition, to examine the flavonoid auxin interaction in stress, we correlated the responses with the effects of exogenous application of auxin and an auxin transport inhibitor. The results show that exogenous flavonoids inhibit primary root growth and increase the development of lateral roots. Exogenous flavonoids also change the pattern of expression of specific genes associated with root tissue differentiation. These findings indicate that flavonoid glycosides can influence the polar transport of auxin, leading to stress responses that depend on auxin. PMID:26473454

  2. Role of calcium in gravity perception of plant roots

    NASA Technical Reports Server (NTRS)

    Evans, Michael L.

    1986-01-01

    Calcium ions may play a key role in linking graviperception by the root cap to the asymmetric growth which occurs in the elongation zone of gravistimulated roots. Application of calcium-chelating agents to the root cap inhibits gravitropic curvature without affecting growth. Asymmetric application of calcium to one side of the root cap induces curvature toward the calcium source, and gravistimulation induces polar movement of applied (Ca-45)(2+) across the root cap toward the lower side. The action of calcium may be linked to auxin movement in roots since: (1) auxin transport inhibitors interfere both with gravitropic curvature and graviinduced polar calcium movement and (2) asymmetric application of calcium enhances auxin movement across the elongation zone of gravistimulated roots. Indirect evidence indicates that the calcium-modulated regulator protein, calmodulin, may be involved in either the transport or action of calcium in the gravitropic response mechanism of roots.

  3. Nemesia root hair response to paper pulp substrate for micropropagation.

    PubMed

    Labrousse, Pascal; Delmail, David; Decou, Raphaël; Carlué, Michel; Lhernould, Sabine; Krausz, Pierre

    2012-01-01

    Agar substrates for in vitro culture are well adapted to plant micropropagation, but not to plant rooting and acclimatization. Conversely, paper-pulp-based substrates appear as potentially well adapted for in vitro culture and functional root production. To reinforce this hypothesis, this study compares in vitro development of nemesia on several substrates. Strong differences between nemesia roots growing in agar or in paper-pulp substrates were evidenced through scanning electron microscopy. Roots developed in agar have shorter hairs, larger rhizodermal cells, and less organized root caps than those growing on paper pulp. In conclusion, it should be noted that in this study, in vitro microporous substrates such as paper pulp lead to the production of similar root hairs to those found in greenhouse peat substrates. Consequently, if agar could be used for micropropagation, rooting, and plant acclimatization, enhancement could be achieved if rooting stage was performed on micro-porous substrates such as paper pulp.

  4. Phototropism and gravitropism in lateral roots of Arabidopsis

    NASA Technical Reports Server (NTRS)

    Kiss, John Z.; Miller, Kelley M.; Ogden, Lisa A.; Roth, Kelly K.

    2002-01-01

    Gravitropism and, to a lesser extent, phototropism have been characterized in primary roots, but little is known about structural/functional aspects of these tropisms in lateral roots. Therefore, in this study, we report on tropistic responses in lateral roots of Arabidopsis thaliana. Lateral roots initially are plagiogravitropic, but when they reach a length of approximately 10 mm, these roots grow downward and exhibit positive orthogravitropism. Light and electron microscopic studies demonstrate a correlation between positive gravitropism and development of columella cells with large, sedimented amyloplasts in wild-type plants. Lateral roots display negative phototropism in response to white and blue light and positive phototropism in response to red light. As is the case with primary roots, the photoresponse is weak relative to the graviresponse, but phototropism is readily apparent in starchless mutant plants, which are impaired in gravitropism. To our knowledge, this is the first report of phototropism of lateral roots in any plant species.

  5. 21 CFR 872.3820 - Root canal filling resin.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ...) MEDICAL DEVICES DENTAL DEVICES Prosthetic Devices § 872.3820 Root canal filling resin. (a) Identification... for use during endodontic therapy to fill the root canal of a tooth. (b) Classification. (1) Class...

  6. Root lengths of plants on Los Alamos National Laboratory lands

    SciTech Connect

    Tierney, G.D.; Foxx, T.S.

    1987-01-01

    Maximum root lengths of 22 plant species occurring on Los Alamos National Laboratory lands were measured. An average of two longest roots from each species were dug up and their lengths, typical shapes, and qualitative morphologics were noted along with the overstory dimensions of the plant individual with which the roots were associated. Maximum root lengths were compared with overstory (height times width) dimensions. Among the life forms studied, the shrubs tend to show the longest roots in relation to overstory size. Forbs show the shortest roots in relation to overstory size. Measurements of tree roots suggest only that immature trees on the Pajarito Plateau may have root-length to overstory-size ratios near one. 30 refs., 14 figs., 2 tabs.

  7. Phototropism and gravitropism in lateral roots of Arabidopsis.

    PubMed

    Kiss, John Z; Miller, Kelley M; Ogden, Lisa A; Roth, Kelly K

    2002-01-01

    Gravitropism and, to a lesser extent, phototropism have been characterized in primary roots, but little is known about structural/functional aspects of these tropisms in lateral roots. Therefore, in this study, we report on tropistic responses in lateral roots of Arabidopsis thaliana. Lateral roots initially are plagiogravitropic, but when they reach a length of approximately 10 mm, these roots grow downward and exhibit positive orthogravitropism. Light and electron microscopic studies demonstrate a correlation between positive gravitropism and development of columella cells with large, sedimented amyloplasts in wild-type plants. Lateral roots display negative phototropism in response to white and blue light and positive phototropism in response to red light. As is the case with primary roots, the photoresponse is weak relative to the graviresponse, but phototropism is readily apparent in starchless mutant plants, which are impaired in gravitropism. To our knowledge, this is the first report of phototropism of lateral roots in any plant species.

  8. 11. PHOTOCOPY OF P. H. & F. M. ROOTS CO. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    11. PHOTOCOPY OF P. H. & F. M. ROOTS CO. ILLUSTRATED LETTERHEAD STATEMENT, OCT. 1, 1907, FROM COLLECTION OF KENNETH MILLS, CONNERSVILLE, IND. - P. H. & F. M. Roots Company, Eastern Avenue, Connersville, Fayette County, IN

  9. Role of calcium in gravity perception of plant roots

    NASA Astrophysics Data System (ADS)

    Evans, Michael L.

    Calcium ions may play a key role in linking graviperception by the root cap to the asymmetric growth which occurs in the elongation zone of gravistimulated roots. Application of calcium-chelating agents to the root cap inhibits gravitropic curvature without affecting growth. Asymmetric application of calcium to one side of the root cap induces curvature toward the calcium source, and gravistimulation induces polar movement of applied 45Ca2+ across the root cap toward the lower side. The action of calcium may be linked to auxin movement in roots since 1) auxin transport inhibitors interfere both with gravitropic curvature and gravi-induced polar calcium movement and 2) asymmetric application of calcium enhances auxin movement across the elongation zone of gravistimulated roots. Indirect evidence indicates that the calcium-modulated regulator protein, calmodulin, may be involved in either the transport or action of calcium in the gravitropic response mechanism of roots.

  10. The Common History and Popular Uses of Roots

    ERIC Educational Resources Information Center

    Rost, Thomas L.; Sandler, Maureen L.

    1978-01-01

    Describes the historical uses of popular plant roots such as mandrake, ginseng, chicory, belladonna, and blood root. Besides the text, information is organized into a table presenting use, application, and constituents. (MA)

  11. Moving forward with fine-root definitions and research

    DOE PAGESBeta

    McCormack, M. Luke; Iversen, Colleen M.; Eissenstat, David M.

    2016-08-30

    Here, in the letter published in this issue of New Phytologist (pp. 310-312), 'Fine roots - functional definition expanded to crop species?' Dr. Zobel emphasizes the importance of heterogeneity within crop-root systems.

  12. Nemesia Root Hair Response to Paper Pulp Substrate for Micropropagation

    PubMed Central

    Labrousse, Pascal; Delmail, David; Decou, Raphaël; Carlué, Michel; Lhernould, Sabine; Krausz, Pierre

    2012-01-01

    Agar substrates for in vitro culture are well adapted to plant micropropagation, but not to plant rooting and acclimatization. Conversely, paper-pulp-based substrates appear as potentially well adapted for in vitro culture and functional root production. To reinforce this hypothesis, this study compares in vitro development of nemesia on several substrates. Strong differences between nemesia roots growing in agar or in paper-pulp substrates were evidenced through scanning electron microscopy. Roots developed in agar have shorter hairs, larger rhizodermal cells, and less organized root caps than those growing on paper pulp. In conclusion, it should be noted that in this study, in vitro microporous substrates such as paper pulp lead to the production of similar root hairs to those found in greenhouse peat substrates. Consequently, if agar could be used for micropropagation, rooting, and plant acclimatization, enhancement could be achieved if rooting stage was performed on micro-porous substrates such as paper pulp. PMID:22312323

  13. Analyzing Lateral Root Development: How to Move Forward

    PubMed Central

    De Smet, Ive; White, Philip J.; Bengough, A. Glyn; Dupuy, Lionel; Parizot, Boris; Casimiro, Ilda; Heidstra, Renze; Laskowski, Marta; Lepetit, Marc; Hochholdinger, Frank; Draye, Xavier; Zhang, Hanma; Broadley, Martin R.; Péret, Benjamin; Hammond, John P.; Fukaki, Hidehiro; Mooney, Sacha; Lynch, Jonathan P.; Nacry, Phillipe; Schurr, Ulrich; Laplaze, Laurent; Benfey, Philip; Beeckman, Tom; Bennett, Malcolm

    2012-01-01

    Roots are important to plants for a wide variety of processes, including nutrient and water uptake, anchoring and mechanical support, storage functions, and as the major interface between the plant and various biotic and abiotic factors in the soil environment. Therefore, understanding the development and architecture of roots holds potential for the manipulation of root traits to improve the productivity and sustainability of agricultural systems and to better understand and manage natural ecosystems. While lateral root development is a traceable process along the primary root and different stages can be found along this longitudinal axis of time and development, root system architecture is complex and difficult to quantify. Here, we comment on assays to describe lateral root phenotypes and propose ways to move forward regarding the description of root system architecture, also considering crops and the environment. PMID:22227890

  14. Cell wall properties play an important role in the emergence of lateral root primordia from the parent root

    PubMed Central

    Malamy, Jocelyn E.

    2014-01-01

    Plants adapt to their unique soil environments by altering the number and placement of lateral roots post-embryonic. Mutants were identified in Arabidopsis thaliana that exhibit increased lateral root formation. Eight mutants were characterized in detail and were found to have increased lateral root formation due to at least three distinct mechanisms. The causal mutation in one of these mutants was found in the XEG113 gene, recently shown to be involved in plant cell wall biosynthesis. Lateral root primordia initiation is unaltered in this mutant. In contrast, synchronization of lateral root initiation demonstrated that mutation of XEG113 increases the rate at which lateral root primordia develop and emerge to form lateral roots. The effect of the XEG113 mutation was specific to the root system and had no apparent effect on shoot growth. Screening of 17 additional cell wall mutants, altering a myriad of cell wall components, revealed that many (but not all) types of cell wall defects promote lateral root formation. These results suggest that proper cell wall biosynthesis is necessary to constrain lateral root primordia emergence. While previous reports have shown that lateral root emergence is accompanied by active remodelling of cell walls overlying the primordia, this study is the first to demonstrate that alteration of the cell wall is sufficient to promote lateral root formation. Therefore, inherent cell wall properties may play a previously unappreciated role in regulation of root system architecture. PMID:24619997

  15. Visualization of root water uptake: quantification of deuterated water transport in roots using neutron radiography and numerical modeling.

    PubMed

    Zarebanadkouki, Mohsen; Kroener, Eva; Kaestner, Anders; Carminati, Andrea

    2014-10-01

    Our understanding of soil and plant water relations is limited by the lack of experimental methods to measure water fluxes in soil and plants. Here, we describe a new method to noninvasively quantify water fluxes in roots. To this end, neutron radiography was used to trace the transport of deuterated water (D2O) into roots. The results showed that (1) the radial transport of D2O from soil to the roots depended similarly on diffusive and convective transport and (2) the axial transport of D2O along the root xylem was largely dominated by convection. To quantify the convective fluxes from the radiographs, we introduced a convection-diffusion model to simulate the D2O transport in roots. The model takes into account different pathways of water across the root tissue, the endodermis as a layer with distinct transport properties, and the axial transport of D2O in the xylem. The diffusion coefficients of the root tissues were inversely estimated by simulating the experiments at night under the assumption that the convective fluxes were negligible. Inverse modeling of the experiment at day gave the profile of water fluxes into the roots. For a 24-d-old lupine (Lupinus albus) grown in a soil with uniform water content, root water uptake was higher in the proximal parts of lateral roots and decreased toward the distal parts. The method allows the quantification of the root properties and the regions of root water uptake along the root systems.

  16. Stored carbon partly fuels fine-root respiration but is not used for production of new fine roots

    SciTech Connect

    Lynch, Douglas J; Matamala-Paradeda, Roser; Iversen, Colleen M; Norby, Richard J; Gonzalez-Meler, Miguel A

    2013-01-01

    The relative use of new photosynthate compared to stored C for the production and maintenance of fine roots, and the rate of C turnover in heterogeneous fine-root populations, are poorly understood. We followed the relaxation of a 13C tracer in fine roots in a Liquidambar styraciflua plantation at the conclusion of a free-air CO2 enrichment experiment. Goals included quantifying the relative fractions of new photosynthate versus stored C used in root growth and root respiration, as well as the turnover rate of fine-root C fixed during [CO2] fumigation. New fine-root growth was largely from recent photosynthate, while nearly one-quarter of respired C was from a storage pool. Changes in the isotopic composition of the fine-root population over two full growing seasons indicated heterogeneous C pools; less than 10% of root C had a residence time < 3 months, while a majority of root C had a residence time > 2 years. Compared to a 1-pool model, a 2-pool model for C turnover in fine roots (with 5 and 0.37 yr-1 turnover times) doubles the fine-root contribution to forest NPP (9-13%) and supports the 50% root-to-soil transfer rate often used in models.

  17. Root Carbon Dioxide Fixation by Phosphorus-Deficient Lupinus albus (Contribution to Organic Acid Exudation by Proteoid Roots).

    PubMed Central

    Johnson, J. F.; Allan, D. L.; Vance, C. P.; Weiblen, G.

    1996-01-01

    When white lupin (Lupinus albus L.) is subjected to P deficiency lateral root development is altered and densely clustered, tertiary lateral roots (proteoid roots) are initiated. These proteoid roots exude large amounts of citrate, which increases P solubilization. In the current study plants were grown with either 1 mM P (+P-treated) or without P (-P-treated). Shoots or roots of intact plants from both P treatments were labeled independently with 14CO2 to compare the relative contribution of C fixed in each with the C exuded from roots as citrate and other organic acids. About 25-fold more acid-stable 14C, primarily in citrate and malate, was recovered in exudates from the roots of -P-treated plants compared with +P-treated plants. The rate of in vivo C fixation in roots was about 4-fold higher in -P-treated plants than in +P-treated plants. Evidence from labeling intact shoots or roots indicates that synthesis of citrate exuded by -P-treated roots is directly related to nonphotosynthetic C fixation in roots. C fixed in roots of -P-treated plants contributed about 25 and 34% of the C exuded as citrate and malate, respectively. Nonphotosynthetic C fixation in white lupin roots is an integral component in the exudation of large amounts of citrate and malate, thus increasing the P available to the plant. PMID:12226371

  18. Visualization of Root Water Uptake: Quantification of Deuterated Water Transport in Roots Using Neutron Radiography and Numerical Modeling[C

    PubMed Central

    Zarebanadkouki, Mohsen; Kroener, Eva; Kaestner, Anders; Carminati, Andrea

    2014-01-01

    Our understanding of soil and plant water relations is limited by the lack of experimental methods to measure water fluxes in soil and plants. Here, we describe a new method to noninvasively quantify water fluxes in roots. To this end, neutron radiography was used to trace the transport of deuterated water (D2O) into roots. The results showed that (1) the radial transport of D2O from soil to the roots depended similarly on diffusive and convective transport and (2) the axial transport of D2O along the root xylem was largely dominated by convection. To quantify the convective fluxes from the radiographs, we introduced a convection-diffusion model to simulate the D2O transport in roots. The model takes into account different pathways of water across the root tissue, the endodermis as a layer with distinct transport properties, and the axial transport of D2O in the xylem. The diffusion coefficients of the root tissues were inversely estimated by simulating the experiments at night under the assumption that the convective fluxes were negligible. Inverse modeling of the experiment at day gave the profile of water fluxes into the roots. For a 24-d-old lupine (Lupinus albus) grown in a soil with uniform water content, root water uptake was higher in the proximal parts of lateral roots and decreased toward the distal parts. The method allows the quantification of the root properties and the regions of root water uptake along the root systems. PMID:25189533

  19. Root Disease, Longleaf Pine Mortality, and Prescribed Burning

    SciTech Connect

    Otrosina, W.J; C.H. Walkinshaw; S.J. Zarnoch; S-J. Sung; B.T. Sullivan

    2001-01-01

    Study to determine factors involved in decline of longleaf pine associated with prescribed burning. Trees having symptoms were recorded by crown rating system based upon symptom severity-corresponded to tree physiological status-increased in hot burn plots. Root pathogenic fungi widespread throughout the study site. Histological studies show high fine root mortality rate in the hot burn treatment. Decline syndrome is complexed by root pathogens, soil factors, root damage and dysfunction.

  20. How to study deep roots-and why it matters.

    PubMed

    Maeght, Jean-Luc; Rewald, Boris; Pierret, Alain

    2013-01-01

    The drivers underlying the development of deep root systems, whether genetic or environmental, are poorly understood but evidence has accumulated that deep rooting could be a more widespread and important trait among plants than commonly anticipated from their share of root biomass. Even though a distinct classification of "deep roots" is missing to date, deep roots provide important functions for individual plants such as nutrient and water uptake but can also shape plant communities by hydraulic lift (HL). Subterranean fauna and microbial communities are highly influenced by resources provided in the deep rhizosphere and deep roots can influence soil pedogenesis and carbon storage.Despite recent technological advances, the study of deep roots and their rhizosphere remains inherently time-consuming, technically demanding and costly, which explains why deep roots have yet to be given the attention they deserve. While state-of-the-art technologies are promising for laboratory studies involving relatively small soil volumes, they remain of limited use for the in situ observation of deep roots. Thus, basic techniques such as destructive sampling or observations at transparent interfaces with the soil (e.g., root windows) which have been known and used for decades to observe roots near the soil surface, must be adapted to the specific requirements of deep root observation. In this review, we successively address major physical, biogeochemical and ecological functions of deep roots to emphasize the significance of deep roots and to illustrate the yet limited knowledge. In the second part we describe the main methodological options to observe and measure deep roots, providing researchers interested in the field of deep root/rhizosphere studies with a comprehensive overview. Addressed methodologies are: excavations, trenches and soil coring approaches, minirhizotrons (MR), access shafts, caves and mines, and indirect approaches such as tracer-based techniques.

  1. Root-Contact/Pressure-Plate Assembly For Hydroponic System

    NASA Technical Reports Server (NTRS)

    Morris, Carlton E.; Loretan, Philip A.; Bonsi, Conrad K.; Hill, Walter A.

    1994-01-01

    Hydroponic system includes growth channels equipped with rootcontact/pressure-plate assemblies. Pump and associated plumbing circulate nutrient liquid from reservoir, along bottom of growth channels, and back to reservoir. Root-contact/pressure-plate assembly in each growth channel stimulates growth of roots by applying mild contact pressure. Flat plate and plate connectors, together constitute pressure plate, free to move upward to accommodate growth of roots. System used for growing sweetpotatoes and possibly other tuber and root crops.

  2. A plausible mechanism for auxin patterning along the developing root

    PubMed Central

    2010-01-01

    Background In plant roots, auxin is critical for patterning and morphogenesis. It regulates cell elongation and division, the development and maintenance of root apical meristems, and other processes. In Arabidopsis, auxin distribution along the central root axis has several maxima: in the root tip, in the basal meristem and at the shoot/root junction. The distal maximum in the root tip maintains the stem cell niche. Proximal maxima may trigger lateral or adventitious root initiation. Results We propose a reflected flow mechanism for the formation of the auxin maximum in the root apical meristem. The mechanism is based on auxin's known activation and inhibition of expressed PIN family auxin carriers at low and high auxin levels, respectively. Simulations showed that these regulatory interactions are sufficient for self-organization of the auxin distribution pattern along the central root axis under varying conditions. The mathematical model was extended with rules for discontinuous cell dynamics so that cell divisions were also governed by auxin, and by another morphogen Division Factor which combines the actions of cytokinin and ethylene on cell division in the root. The positional information specified by the gradients of these two morphogens is able to explain root patterning along the central root axis. Conclusion We present here a plausible mechanism for auxin patterning along the developing root, that may provide for self-organization of the distal auxin maximum when the reverse fountain has not yet been formed or has been disrupted. In addition, the proximal maxima are formed under the reflected flow mechanism in response to periods of increasing auxin flow from the growing shoot. These events may predetermine lateral root initiation in a rhyzotactic pattern. Another outcome of the reflected flow mechanism - the predominance of lateral or adventitious roots in different plant species - may be based on the different efficiencies with which auxin inhibits its

  3. Artificial Root Exudate System (ARES): a field approach to simulate tree root exudation in soils

    NASA Astrophysics Data System (ADS)

    Lopez-Sangil, Luis; Estradera-Gumbau, Eduard; George, Charles; Sayer, Emma

    2016-04-01

    The exudation of labile solutes by fine roots represents an important strategy for plants to promote soil nutrient availability in terrestrial ecosystems. Compounds exuded by roots (mainly sugars, carboxylic and amino acids) provide energy to soil microbes, thus priming the mineralization of soil organic matter (SOM) and the consequent release of inorganic nutrients into the rhizosphere. Studies in several forest ecosystems suggest that tree root exudates represent 1 to 10% of the total photoassimilated C, with exudation rates increasing markedly under elevated CO2 scenarios. Despite their importance in ecosystem functioning, we know little about how tree root exudation affect soil carbon dynamics in situ. This is mainly because there has been no viable method to experimentally control inputs of root exudates at field scale. Here, I present a method to apply artificial root exudates below the soil surface in small field plots. The artificial root exudate system (ARES) consists of a water container with a mixture of labile carbon solutes (mimicking tree root exudate rates and composition), which feeds a system of drip-tips covering an area of 1 m2. The tips are evenly distributed every 20 cm and inserted 4-cm into the soil with minimal disturbance. The system is regulated by a mechanical timer, such that artificial root exudate solution can be applied at frequent, regular daily intervals. We tested ARES from April to September 2015 (growing season) within a leaf-litter manipulation experiment ongoing in temperate deciduous woodland in the UK. Soil respiration was measured monthly, and soil samples were taken at the end of the growing season for PLFA, enzymatic activity and nutrient analyses. First results show a very rapid mineralization of the root exudate compounds and, interestingly, long-term increases in SOM respiration, with negligible effects on soil moisture levels. Large positive priming effects (2.5-fold increase in soil respiration during the growing

  4. Rooting out Defense Mechanisms in Wheat against Plant Parasitic Nematodes

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Root-lesion nematodes (Pratylenchus spp.) are soil borne pathogens of many important agricultural crops including wheat. Pratylenchus invade root cells and feed using a stylet, resulting in cell death. Common signs of Pratylenchus damage are root lesions, girdling, and lack of lateral branching. ...

  5. Newer Root Canal Irrigants in Horizon: A Review

    PubMed Central

    Jaju, Sushma; Jaju, Prashant P.

    2011-01-01

    Sodium hypochloride is the most commonly used endodontic irrigant, despite limitations. None of the presently available root canal irrigants satisfy the requirements of ideal root canal irrigant. Newer root canal irrigants are studied for potential replacement of sodium hypochloride. This article reviews the potential irrigants with their advantages and limitations with their future in endodontic irrigation. PMID:22190936

  6. 21 CFR 872.3820 - Root canal filling resin.

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... 21 Food and Drugs 8 2012-04-01 2012-04-01 false Root canal filling resin. 872.3820 Section 872...) MEDICAL DEVICES DENTAL DEVICES Prosthetic Devices § 872.3820 Root canal filling resin. (a) Identification. A root canal filling resin is a device composed of material, such as methylmethacrylate,...

  7. 21 CFR 872.3820 - Root canal filling resin.

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... 21 Food and Drugs 8 2014-04-01 2014-04-01 false Root canal filling resin. 872.3820 Section 872...) MEDICAL DEVICES DENTAL DEVICES Prosthetic Devices § 872.3820 Root canal filling resin. (a) Identification. A root canal filling resin is a device composed of material, such as methylmethacrylate,...

  8. 21 CFR 872.3820 - Root canal filling resin.

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... 21 Food and Drugs 8 2013-04-01 2013-04-01 false Root canal filling resin. 872.3820 Section 872...) MEDICAL DEVICES DENTAL DEVICES Prosthetic Devices § 872.3820 Root canal filling resin. (a) Identification. A root canal filling resin is a device composed of material, such as methylmethacrylate,...

  9. 21 CFR 872.3820 - Root canal filling resin.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Root canal filling resin. 872.3820 Section 872...) MEDICAL DEVICES DENTAL DEVICES Prosthetic Devices § 872.3820 Root canal filling resin. (a) Identification. A root canal filling resin is a device composed of material, such as methylmethacrylate,...

  10. [Medicinal plant hairy roots generating and their applications].

    PubMed

    Zhang, Meng; Gao, Wei; Wang, Xiu-Juan

    2014-06-01

    As a kind of the plant tissue cultures, hairy root culture is characterized by rapid growth without exogenous hormones source and high yield of secondary metabolites, which attracted the attention of scholars in resent years. This work systematically summarized the research of medicinal plant hairy roots, including the mechanism, current situation of medicinal plant hairy roots, and their applications. PMID:25272822

  11. How the spatial variation of tree roots affects slope stability

    NASA Astrophysics Data System (ADS)

    Mao, Zhun; Stokes, A.; Jourdan, C.; Rey, H.; Courbaud, B.; Saint-André, L.

    2010-05-01

    It is now widely recognized that plant roots can reinforce soil against shallow mass movement. Although studies on the interactions between vegetation and slope stability have significantly augmented in recent years, a clear understanding of the spatial dynamics of root reinforcement (through additional cohesion by roots) in subalpine forest is still limited, especially with regard to the roles of different forest management strategies or ecological landscapes. The architecture of root systems is important for soil cohesion, but in reality it is not possible to measure the orientation of each root in a system. Therefore, knowledge on the effect of root orientation and anisotropy on root cohesion on the basis of in situ data is scanty. To determine the effect of root orientation in root cohesion models, we investigated root anisotropy in two mixed, mature, naturally regenerated, subalpine forests of Norway spruce (Picea abies), and Silver fir (Abies alba). Trees were clustered into islands, with open spaces between each group, resulting in strong mosaic heterogeneity within the forest stand. Trenches within and between clusters of trees were dug and root distribution was measured in three dimensions. We then simulated the influence of different values for a root anisotropy correction factor in forests with different ecological structures and soil depths. Using these data, we have carried out simulations of slope stability by calculating the slope factor of safety depending on stand structure. Results should enable us to better estimate the risk of shallow slope failure depending on the type of forest and species.

  12. Root rot in sugar beet piles at harvest

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Sugar beet root rots are not only a concern because of reduced yields, but can also be associated with losses in storage. Our primary sugar beet root rot disease problem in the Amalgamated production area is Rhizoctonia root rot. However, this rot frequently only penetrates a short distance past t...

  13. Sibling Curves and Complex Roots 1: Looking Back

    ERIC Educational Resources Information Center

    Harding, Ansie; Engelbrecht, Johann

    2007-01-01

    This paper, the first of a two-part article, follows the trail in history of the development of a graphical representation of the complex roots of a function. Root calculation and root representation are traced through millennia, including the development of the notion of complex numbers and subsequent graphical representation thereof. The…

  14. Delayed ripple counter simplifies square-root computation

    NASA Technical Reports Server (NTRS)

    Cliff, R.

    1965-01-01

    Ripple subtract technique simplifies the logic circuitry required in a binary computing device to derive the square root of a number. Successively higher numbers are subtracted from a register containing the number out of which the square root is to be extracted. The last number subtracted will be the closest integer to the square root of the number.

  15. Thymol derivatives from hairy roots of Arnica montana.

    PubMed

    Weremczuk-Jezyna, I; Kisiel, W; Wysokińska, H

    2006-09-01

    Five known thymol derivatives were isolated from roots of Arnica montana transformed with Agrobacterium rhizogenes LBA 9402. The compounds were characterized by spectral methods. The pattern of thymol derivatives in light-grown hairy roots was slightly different from that in dark-grown ones. This is the first report on the presence of thymol derivatives in hairy roots of the plant.

  16. Scaling root processes based on plant functional traits (Invited)

    NASA Astrophysics Data System (ADS)

    Eissenstat, D. M.; McCormack, M. L.; Gaines, K.; Adams, T.

    2013-12-01

    There are great challenges to scaling root processes as variation across species and variation of a particular species over different spatial and temporal scales is poorly understood. We have examined tree species variation using multispecies plantings, often referred to by ecologists as 'common gardens'. Choosing species with wide variation in growth rate, root morphology (diameter, branching intensity) and root chemistry (root N and Ca concentration), we found that variation in root lifespan was well correlated with plant functional traits across 12 species. There was also evidence that localized liquid N addition could increase root lifespan and localized water addition diminished root lifespan over untreated controls, with effects strongest in the species of finest root diameter. In an adjacent forest, we have also seen tree species variation in apparent depth of rooting using water isotopes. In particular species of wood anatomy that was ring porous (e.g. oaks) typically had the deepest rooting depth, whereas those that had either diffuse-porous sapwood (maples) or tracheid sapwood (pines) were shallower rooted. These differences in rooting depth were related to sap flux of trees during and immediately after periods of drought. The extent that the patterns observed in central Pennsylvania are modulated by environment or indicative of other plant species will be discussed.

  17. Antihistaminic activity of Clitoria ternatea L. roots.

    PubMed

    Taur, Dnyaneshwar J; Patil, Ravindra Y

    2010-12-01

    Clonidine, a α2 adrenoreceptor agonist induces dose dependent catalepsy in mice, which was inhibited by histamine H1 receptor antagonists but not by H2 receptor antagonist. Clonidine releases histamine from mast cells which is responsible for different asthmatic conditions. Clitoria ternatea L. (Family: Fabaceae) is a perimial twing herb. The roots have anti-inflammatory properties and are useful in severe bronchitis, asthma. In present study ethanol extract of Clitoria ternatea root (ECTR) at doses 100, 125 and 150 mg/kg i.p were evaluated for antihistaminic activity using clonidine and haloperidol induced catalepsy in mice. Finding of investigation showed that chlorpheniramine maleate (CPM) and ECTR inhibit clonidine induced catalepsy significantly P < 0.001 when compare to control group, while CPM and ECTR fail to inhibit haloperidol induced catalepsy. Present study concludes that ECTR possesses antihistaminic activity. PMID:24826001

  18. The roots of future rice harvests.

    PubMed

    Ahmadi, Nourollah; Audebert, Alain; Bennett, Malcolm J; Bishopp, Anthony; de Oliveira, Antonio Costa; Courtois, Brigitte; Diedhiou, Abdala; Diévart, Anne; Gantet, Pascal; Ghesquière, Alain; Guiderdoni, Emmanuel; Henry, Amelia; Inukai, Yoshiaki; Kochian, Leon; Laplaze, Laurent; Lucas, Mikael; Luu, Doan Trung; Manneh, Baboucarr; Mo, Xiaorong; Muthurajan, Raveendran; Périn, Christophe; Price, Adam; Robin, Sabariappan; Sentenac, Hervé; Sine, Bassirou; Uga, Yusaku; Véry, Anne Aliénor; Wissuwa, Matthias; Wu, Ping; Xu, Jian

    2014-12-01

    Rice production faces the challenge to be enhanced by 50% by year 2030 to meet the growth of the population in rice-eating countries. Whereas yield of cereal crops tend to reach plateaus and a yield is likely to be deeply affected by climate instability and resource scarcity in the coming decades, building rice cultivars harboring root systems that can maintain performance by capturing water and nutrient resources unevenly distributed is a major breeding target. Taking advantage of gathering a community of rice root biologists in a Global Rice Science Partnership workshop held in Montpellier, France, we present here the recent progresses accomplished in this area and focal points where an international network of laboratories should direct their efforts. PMID:26224558

  19. Antihistaminic activity of Clitoria ternatea L. roots

    PubMed Central

    Taur, Dnyaneshwar J; Patil, Ravindra Y

    2010-01-01

    Clonidine, a α2 adrenoreceptor agonist induces dose dependent catalepsy in mice, which was inhibited by histamine H1 receptor antagonists but not by H2 receptor antagonist. Clonidine releases histamine from mast cells which is responsible for different asthmatic conditions. Clitoria ternatea L. (Family: Fabaceae) is a perimial twing herb. The roots have anti-inflammatory properties and are useful in severe bronchitis, asthma. In present study ethanol extract of Clitoria ternatea root (ECTR) at doses 100, 125 and 150 mg/kg i.p were evaluated for antihistaminic activity using clonidine and haloperidol induced catalepsy in mice. Finding of investigation showed that chlorpheniramine maleate (CPM) and ECTR inhibit clonidine induced catalepsy significantly P < 0.001 when compare to control group, while CPM and ECTR fail to inhibit haloperidol induced catalepsy. Present study concludes that ECTR possesses antihistaminic activity PMID:24826001

  20. ROOT6: a Quest for Performance

    NASA Astrophysics Data System (ADS)

    Piparo, Danilo

    2015-12-01

    The sixth release cycle of ROOT is characterised by a radical modernisation in the core software technologies the too kit relies on: language standard, interpreter, hardware exploitation mechanisms. If on the one hand, the change offered the opportunity of consolidating the existing code base, in presence of such innovations, maintaining the balance between full backward compatibility and software performance was not easy. In this contribution we review the challenges and the solutions identified and implemented in the area of CPU and memory consumption as well as I/O capabilities in terms of patterns. Moreover, we present some of the new ROOT components which are offered to the users to improve the performance of third party applications.

  1. [Radiographic diagnosis of vertical root fracture].

    PubMed

    Guangning, Zheng; Jiyao, Li

    2016-02-01

    Vertical root fracture (VRF) is different from odontoclasis caused by trauma or injury. VRF is defined as a complete or incomplete fracture of roots caused by long-term and persistent stimulus, such as excessive forces from mastication or occlusion, improper tooth anatomy, and tooth treatment accident. Early diagnosis of VRF is essential to prevent the absorption of alveolar bone, thereby improving prognosis. Radiographic examination is the most common and effective evaluation method for VRF. Cone beam computed tomography can provide three-dimensional information for fracture details, which are more precise than traditional periapical films. In this paper, we present the radiographic features, differential diagnosis, and new treatment techniques for VRF. PMID:27266189

  2. Iridoids from the roots of Valeriana jatamansi.

    PubMed

    Xu, Jing; Guo, Ping; Fang, Ling-Zhi; Li, Yu-Shan; Guo, Yuan-Qiang

    2012-01-01

    Two new iridoids, jatamanvaltrates N (1) and O (2), together with four known compounds (3-6), were isolated from the roots of Valeriana jatamansi. Their structures and relative configurations were elucidated by spectroscopic methods (IR, ESI-MS, HR-ESI-MS, 1D, and 2D NMR) and by comparison of their NMR spectral data with those of related compounds. All the isolated compounds were evaluated for their neuroprotective effects, and only compound 1 showed weak neuroprotective activities.

  3. Linking roots and rhizospheres to hydrological processes

    NASA Astrophysics Data System (ADS)

    Dawson, T. E.

    2007-12-01

    There is ample evidence that shows how plants can exert very significant and often dominant -controls" over the manner and magnitude by which water and other soil-borne resources cycle through diverse ecosystems on Earth. The use and redistribution of soil water resources by root systems has been a particularly important addition to our understanding of how the movement of soil water resources can impact hydrological processes at a range of scales. When soil and plant water relations data are coupled with land-use and climatic change data and predictive models for seasonally-dry ecosystems they have revealed new insights into how the water cycle is also changing and the role that plant root functions plays in shaping fundamental aspects of the hydrological cycle. I will highlight the ways my research group as well as the work of others have used a range of methods to explore the links between roots and rhizospheres and hydrological processes. The detailed analyses of the stable isotope composition of plant and soil water and precipitation and the temporal and spatial patterns of water use by diverse trees in temperate and tropical biomes when coupled with ongoing modeling research has revealed new insights into how belowground and aboveground plant water use behaviors can impact the manned and magnitude of water cycling on local and regional scales. Further, new results clearly show the impacts that plant water uptake and use have on ecosystem carbon fixation and both temperature and precipitation patterns over vast regions like the Amazon as well as other parts of the globe covered by trees and deeply rooted woody vegetation. The combination of empirical and theoretical research results shows that plants can help sustain water recycling, can significantly impact carbon and nutrient cycles, and impact regional climate, drought and its seasonality thereby establishing a direct link between plant functioning, resource movement and the climate system across the globe.

  4. Dynamics of root growth in microgravity.

    PubMed

    Johnsson, A; Karlsson, C; Chapman, D K; Braseth, J D; Iversen, T H

    1996-06-27

    An experiment to study the growth of garden cress roots in microgravity is described. The experiment, denoted RANDOM, was an ESA Biorack experiment in the IML-2 flight in July 1994. In the absence of gravity, it can be anticipated that the roots would show random growth, changing their direction randomly. The hypothesis that such random growth movements occur according to random walk theory, leads to predictions as to the detailed manner in which deviations increase with time. The experiment was designed to test this random walk hypothesis. The paper concentrates on the technological aspects of studying the roots in microgravity. The development of suitable plant chambers, fitting containers developed by ESA, is described as well as the techniques used to grow the seeds between agar slices. hardware was developed to record photographically root movements between the agar slices. Photos were taken once per hour. Some plant chambers were designed to allow fixation of plant material in space. The practical solutions found using glutaraldehyde for prefixation in the Spacelab, within the restrictions given, are described. The experimental results show that the growth pattern in fact followed the prediction from the random walk approach. The average changes in the growth direction stayed constant and equal to zero during the experiment while the squared angular deviations increased proportional to time. Furthermore, plant material prefixed in orbit was permanently fixed after the flight. Light microscopy and electron microscopy pictures are shown as examples of the results achieved. The long prefixation period meant a drawback for the quality of the fixation process. However, sections suitable for study were achieved. The main goals of the RANDOM experiment were therefore achieved.

  5. Detecting prime numbers via roots of polynomials

    NASA Astrophysics Data System (ADS)

    Dobbs, David E.

    2012-04-01

    It is proved that an integer n ≥ 2 is a prime (resp., composite) number if and only if there exists exactly one (resp., more than one) nth-degree monic polynomial f with coefficients in Z n , the ring of integers modulo n, such that each element of Z n is a root of f. This classroom note could find use in any introductory course on abstract algebra or elementary number theory.

  6. Etiology and sequelae of root resorption.

    PubMed

    Vlaskalic, V; Boyd, R L; Baumrind, S

    1998-06-01

    This article reviews the current status of investigation into apical root resorption within the context of orthodontic treatment. Treatment and patient factors that have traditionally been investigated are discussed, along with the results of current research in this area. The need for rethinking traditional research strategies in the quest for identifying both control and causative mechanisms is explored. Finally, proposals for key areas of future interest are highlighted.

  7. Tonoplast Aquaporins Facilitate Lateral Root Emergence.

    PubMed

    Reinhardt, Hagen; Hachez, Charles; Bienert, Manuela Désirée; Beebo, Azeez; Swarup, Kamal; Voß, Ute; Bouhidel, Karim; Frigerio, Lorenzo; Schjoerring, Jan K; Bennett, Malcolm J; Chaumont, Francois

    2016-03-01

    Aquaporins (AQPs) are water channels allowing fast and passive diffusion of water across cell membranes. It was hypothesized that AQPs contribute to cell elongation processes by allowing water influx across the plasma membrane and the tonoplast to maintain adequate turgor pressure. Here, we report that, in Arabidopsis (Arabidopsis thaliana), the highly abundant tonoplast AQP isoforms AtTIP1;1, AtTIP1;2, and AtTIP2;1 facilitate the emergence of new lateral root primordia (LRPs). The number of lateral roots was strongly reduced in the triple tip mutant, whereas the single, double, and triple tip mutants showed no or minor reduction in growth of the main root. This phenotype was due to the retardation of LRP emergence. Live cell imaging revealed that tight spatiotemporal control of TIP abundance in the tonoplast of the different LRP cells is pivotal to mediating this developmental process. While lateral root emergence is correlated to a reduction of AtTIP1;1 and AtTIP1;2 protein levels in LRPs, expression of AtTIP2;1 is specifically needed in a restricted cell population at the base, then later at the flanks, of developing LRPs. Interestingly, the LRP emergence phenotype of the triple tip mutants could be fully rescued by expressing AtTIP2;1 under its native promoter. We conclude that TIP isoforms allow the spatial and temporal fine-tuning of cellular water transport, which is critically required during the highly regulated process of LRP morphogenesis and emergence.

  8. Root Cause Analysis and Health Informatics.

    PubMed

    Jones, Richard W; Despotou, George

    2016-01-01

    Root Cause Analysis (RCA) is the most widely used system analysis tool for investigating safety related incidents in healthcare. This contribution reviews RCA techniques, using a Health Informatics example, and discusses barriers to their successful uptake by healthcare organisations. It is concluded that a critical assessment to examine the uptake and evaluate the success of RCA, and other safety related techniques, within healthcare is long overdue. PMID:27350485

  9. Root region airfoil for wind turbine

    DOEpatents

    Tangler, J.L.; Somers, D.M.

    1995-05-23

    A thick airfoil is described for the root region of the blade of a wind turbine. The airfoil has a thickness in a range from 24%--26% and a Reynolds number in a range from 1,000,000 to 1,800,000. The airfoil has a maximum lift coefficient of 1.4--1.6 that has minimum sensitivity to roughness effects. 3 Figs.

  10. Detecting Prime Numbers via Roots of Polynomials

    ERIC Educational Resources Information Center

    Dobbs, David E.

    2012-01-01

    It is proved that an integer n [greater than or equal] 2 is a prime (resp., composite) number if and only if there exists exactly one (resp., more than one) nth-degree monic polynomial f with coefficients in Z[subscript n], the ring of integers modulo n, such that each element of Z[subscript n] is a root of f. This classroom note could find use in…

  11. CO(2) Fixation in Opuntia Roots.

    PubMed

    Ting, I P; Dugger, W M

    1966-03-01

    Nonautotrophic CO(2) metabolism in Opuntia echinocarpa roots was studied with techniques of manometry and radiometry. The roots were grown in a one-quarter strength nutrient solution for several days; the distal 2 cm was used for physiological studies. The roots assimilated significant quantities of (14)CO(2) and appeared to show a crassulacean-type acid metabolism with respect to quality and quantity. Most of the (14)C activity was associated with the distal portion of the elongating root indicating correlation with metabolic activity. The (14)CO(2) assimilation was comparable to a crassulacean leaf succulent, but 3 times greater than that found for stem tissue of the same Opuntia species.The rates of O(2) and CO(2) exchange and estimated CO(2) fixation were 180, 123, and 57 mul/g per hour. A respiratory quotient of 0.66 was found.The products of (14)CO(2) fixation were similar in most respects to reported experiments with leaf succulents. Equilibration of the predominant malic acid with isocitric, succinic, and fumaric acids was not evident. The latter observation was interpreted as metabolic isolation of the fixation products rather than poor citric acid cycle activity.A rapid turnover of the fixed (14)CO(2) was measured by following decarboxlyation kinetics and by product analysis after a postincubation period. The first order rate constant for the steady state release was 4.4 x 10(-3) min(-1) with a half-time of 157.5 minutes. Amino acids decayed at a more rapid rate than organic acids.

  12. Effects of partial root-zone irrigation on hydraulic conductivity in the soil-root system of maize plants.

    PubMed

    Hu, Tiantian; Kang, Shaozhong; Li, Fusheng; Zhang, Jianhua

    2011-08-01

    Effects of partial root-zone irrigation (PRI) on the hydraulic conductivity in the soil-root system (L(sr)) in different root zones were investigated using a pot experiment. Maize plants were raised in split-root containers and irrigated on both halves of the container (conventional irrigation, CI), on one side only (fixed PRI, FPRI), or alternately on one of two sides (alternate PRI, APRI). Results show that crop water consumption was significantly correlated with L(sr) in both the whole and irrigated root zones for all three irrigation methods but not with L(sr) in the non-irrigated root zone of FPRI. The total L(sr) in the irrigated root zone of two PRIs was increased by 49.0-92.0% compared with that in a half root zone of CI, suggesting that PRI has a significant compensatory effect of root water uptake. For CI, the contribution of L(sr) in a half root zone to L(sr) in the whole root zone was ∼50%. For FPRI, the L(sr) in the irrigated root zone was close to that of the whole root zone. As for APRI, the L(sr) in the irrigated root zone was greater than that of the non-irrigated root zone. In comparison, the L(sr) in the non-irrigated root zone of APRI was much higher than that in the dried zone of FPRI. The L(sr) in both the whole and irrigated root zones was linearly correlated with soil moisture in the irrigated root zone for all three irrigation methods. For the two PRI treatments, total water uptake by plants was largely determined by the soil water in the irrigated root zone. Nevertheless, the non-irrigated root zone under APRI also contributed to part of the total crop water uptake, but the continuously non-irrigated root zone under FPRI gradually ceased to contribute to crop water uptake, suggesting that it is the APRI that can make use of all the root system for water uptake, resulting in higher water use efficiency.

  13. Effects of partial root-zone irrigation on hydraulic conductivity in the soil–root system of maize plants

    PubMed Central

    Hu, Tiantian; Kang, Shaozhong; Li, Fusheng; Zhang, Jianhua

    2011-01-01

    Effects of partial root-zone irrigation (PRI) on the hydraulic conductivity in the soil–root system (Lsr) in different root zones were investigated using a pot experiment. Maize plants were raised in split-root containers and irrigated on both halves of the container (conventional irrigation, CI), on one side only (fixed PRI, FPRI), or alternately on one of two sides (alternate PRI, APRI). Results show that crop water consumption was significantly correlated with Lsr in both the whole and irrigated root zones for all three irrigation methods but not with Lsr in the non-irrigated root zone of FPRI. The total Lsr in the irrigated root zone of two PRIs was increased by 49.0–92.0% compared with that in a half root zone of CI, suggesting that PRI has a significant compensatory effect of root water uptake. For CI, the contribution of Lsr in a half root zone to Lsr in the whole root zone was ∼50%. For FPRI, the Lsr in the irrigated root zone was close to that of the whole root zone. As for APRI, the Lsr in the irrigated root zone was greater than that of the non-irrigated root zone. In comparison, the Lsr in the non-irrigated root zone of APRI was much higher than that in the dried zone of FPRI. The Lsr in both the whole and irrigated root zones was linearly correlated with soil moisture in the irrigated root zone for all three irrigation methods. For the two PRI treatments, total water uptake by plants was largely determined by the soil water in the irrigated root zone. Nevertheless, the non-irrigated root zone under APRI also contributed to part of the total crop water uptake, but the continuously non-irrigated root zone under FPRI gradually ceased to contribute to crop water uptake, suggesting that it is the APRI that can make use of all the root system for water uptake, resulting in higher water use efficiency. PMID:21527627

  14. Effect of nitrogen fertilizer, root branch order and temperature on respiration and tissue N concentration of fine roots in Larix gmelinii and Fraxinus mandshurica.

    PubMed

    Jia, Shuxia; Wang, Zhengquan; Li, Xingpeng; Zhang, Xiaoping; McLaughlin, Neil B

    2011-07-01

    Root respiration is closely related to root morphology, yet it is unclear precisely how to distinguish respiration-related root physiological functions within the branching fine root system. Root respiration and tissue N concentration were examined for different N fertilization treatments, sampling dates, branch orders and temperatures of larch (Larix gmelinii L.) and ash (Fraxinus mandshurica L.) using the excised roots method. The results showed that N fertilization enhanced both root respiration and tissue N concentration for all five branch orders. The greatest increases in average root respiration for N fertilization treatment were 13.30% in larch and 18.25% in ash at 6°C. However, N fertilization did not change the seasonal dynamics of root respiration. Both root respiration and root tissue N concentration decreased with increase in root branch order. First-order (finest) roots exhibited the highest respiration rates and tissue N concentrations out of the five root branch orders examined. There was a highly significant linear relationship between fine root N concentration and root respiration rate. Root N concentration explained >60% of the variation in respiration rate at any given combination of root order and temperature. Root respiration showed a classical exponential relationship with temperature, with the Q(10) for root respiration in roots of different branching orders ranging from 1.62 to 2.20. The variation in root respiration by order illustrates that first-order roots are more metabolically active, suggesting that roots at different branch order positions have different physiological functions. The highly significant relationship between root respiration at different branch orders and root tissue N concentration suggests that root tissue N concentration may be used as a surrogate for root respiration, simplifying future research into the C dynamics of rooting systems. PMID:21849591

  15. Rooting for the root of elongation factor-like protein phylogeny.

    PubMed

    Kamikawa, Ryoma; Sakaguchi, Miako; Matsumoto, Takuya; Hashimoto, Tetsuo; Inagaki, Yuji

    2010-09-01

    Lateral gene transfer (LGT) may play a pivotal role in the evolution of elongation factor-like (EFL) genes in eukaryotes. To date, numbers of putative cases for lateral transfer of EFL genes have been postulated based on unrooted EFL phylogenies. Nevertheless, the root position in EFL phylogeny is important to validate lateral EFL gene transfer: for instance, a clade of two EFL homologs from distantly related organisms in an unrooted EFL tree does not necessarily confirm the LGT, since the possibility that the root may locate in this clade cannot be excluded. Cocquyt et al. (2009, p. 39) recently demonstrated that a putative case of lateral EFL gene transfer, which was originally proposed based on an unrooted phylogeny, could not be endorsed by the corresponding rooted analysis. Although rooting EFL phylogeny is indispensable to elucidate various aspects in EFL gene evolution, we suspected that the outgroup clade comprised of EF-1alpha and eukaryote-specific EF-1alpha paralogs erroneously attached to long EFL branches in Cocquyt et al. (2009) - a typical long branch attraction (LBA) artifact. Here, we systematically assessed the putative LBA artifact between the branch leading to the outgroup clade and long ingroup branches by analyzing the original dataset used in Cocquyt et al. (2009) with and without modifying ingroup-sequence sampling. A series of the rooted EFL analyses indicated that the root inference was highly susceptible to presence and absence of long-branched ingroup-sequences, suggesting that the rooted EFL phylogenies cannot be free from severe LBA artifact. We also discussed a new aspect in EFL gene evolution in stramenopiles identified in the course of the EFL analyses described above. Finally, the relative timing of the first emergence of EFL gene in eukaryotes was contemplated based on the current EF-1alpha/EFL distribution.

  16. The divining root: moisture-driven responses of roots at the micro- and macro-scale.

    PubMed

    Robbins, Neil E; Dinneny, José R

    2015-04-01

    Water is fundamental to plant life, but the mechanisms by which plant roots sense and respond to variations in water availability in the soil are poorly understood. Many studies of responses to water deficit have focused on large-scale effects of this stress, but have overlooked responses at the sub-organ or cellular level that give rise to emergent whole-plant phenotypes. We have recently discovered hydropatterning, an adaptive environmental response in which roots position new lateral branches according to the spatial distribution of available water across the circumferential axis. This discovery illustrates that roots are capable of sensing and responding to water availability at spatial scales far lower than those normally studied for such processes. This review will explore how roots respond to water availability with an emphasis on what is currently known at different spatial scales. Beginning at the micro-scale, there is a discussion of water physiology at the cellular level and proposed sensory mechanisms cells use to detect osmotic status. The implications of these principles are then explored in the context of cell and organ growth under non-stress and water-deficit conditions. Following this, several adaptive responses employed by roots to tailor their functionality to the local moisture environment are discussed, including patterning of lateral root development and generation of hydraulic barriers to limit water loss. We speculate that these micro-scale responses are necessary for optimal functionality of the root system in a heterogeneous moisture environment, allowing for efficient water uptake with minimal water loss during periods of drought.

  17. Fracture strength of roots instrumented with three different single file systems in curved root canals

    PubMed Central

    Nur, Bilge Gulsum; Ok, Evren; Altunsoy, Mustafa; Tanriver, Mehmet; Capar, Ismail Davut

    2015-01-01

    Objective: The aim of this study was to compare the fracture strength of roots instrumented with three different single file rotary systems in curved mesial root canals of maxillary molars. Materials and Methods: Curvatures of 25°–35° on mesial roots of 60 maxillary molar teeth were sectioned below the cementoenamel junction to obtain roots 11 mm in length. The roots were balanced with respect to buccolingual and mesiodistal diameter and weight. They were distributed into three experimental groups and one control group (no instrumentation) (n = 15): Reciproc rotary file (R25, VDW, Munich, Germany), WaveOne Primary rotary file (Dentsply Tulsa Dental Specialties, Tulsa, UK) and OneShape (Micro-Mega, Besancon, France) rotary file. Vertical load was applied until fracture occurred. Data were statistically analyzed using one-way analysis of variance test (P < 0.05). Results: The mean fracture load was 412 ± 72 Newton (N) for the control group, 395 ± 69 N for the Reciproc group, 373 ± 63 N for the WaveOne group and 332 ± 68 N for the OneShape group. The fracture load differences among three experimental groups were not statistically significant (P > 0.05.) Whereas, the fracture loads of control and OneShape groups were significantly different (P = 0.012). Conclusions: Fracture resistance of the roots instrumented with WaveOne and Reciproc file systems were similar to the control group whereas it was observed that OneShape rotary file systems enhance the fracture strength of standardized curved roots when compared with the control group. PMID:26038648

  18. Can root electrical capacitance be used to predict root mass in soil?

    PubMed Central

    Dietrich, R. C.; Bengough, A. G.; Jones, H. G.; White, P. J.

    2013-01-01

    Background Electrical capacitance, measured between an electrode inserted at the base of a plant and an electrode in the rooting substrate, is often linearly correlated with root mass. Electrical capacitance has often been used as an assay for root mass, and is conventionally interpreted using an electrical model in which roots behave as cylindrical capacitors wired in parallel. Recent experiments in hydroponics show that this interpretation is incorrect and a new model has been proposed. Here, the new model is tested in solid substrates. Methods The capacitances of compost and soil were determined as a function of water content, and the capacitances of cereal plants growing in sand or potting compost in the glasshouse, or in the field, were measured under contrasting irrigation regimes. Key Results Capacitances of compost and soil increased with increasing water content. At water contents approaching field capacity, compost and soil had capacitances at least an order of magnitude greater than those of plant tissues. For plants growing in solid substrates, wetting the substrate locally around the stem base was both necessary and sufficient to record maximum capacitance, which was correlated with stem cross-sectional area: capacitance of excised stem tissue equalled that of the plant in wet soil. Capacitance measured between two electrodes could be modelled as an electrical circuit in which component capacitors (plant tissue or rooting substrate) are wired in series. Conclusions The results were consistent with the new physical interpretation of plant capacitance. Substrate capacitance and plant capacitance combine according to standard physical laws. For plants growing in wet substrate, the capacitance measured is largely determined by the tissue between the surface of the substrate and the electrode attached to the plant. Whilst the measured capacitance can, in some circumstances, be correlated with root mass, it is not a direct assay of root mass. PMID:23493014

  19. The divining root: moisture-driven responses of roots at the micro- and macro-scale

    PubMed Central

    Robbins, Neil E.; Dinneny, José R.

    2015-01-01

    Water is fundamental to plant life, but the mechanisms by which plant roots sense and respond to variations in water availability in the soil are poorly understood. Many studies of responses to water deficit have focused on large-scale effects of this stress, but have overlooked responses at the sub-organ or cellular level that give rise to emergent whole-plant phenotypes. We have recently discovered hydropatterning, an adaptive environmental response in which roots position new lateral branches according to the spatial distribution of available water across the circumferential axis. This discovery illustrates that roots are capable of sensing and responding to water availability at spatial scales far lower than those normally studied for such processes. This review will explore how roots respond to water availability with an emphasis on what is currently known at different spatial scales. Beginning at the micro-scale, there is a discussion of water physiology at the cellular level and proposed sensory mechanisms cells use to detect osmotic status. The implications of these principles are then explored in the context of cell and organ growth under non-stress and water-deficit conditions. Following this, several adaptive responses employed by roots to tailor their functionality to the local moisture environment are discussed, including patterning of lateral root development and generation of hydraulic barriers to limit water loss. We speculate that these micro-scale responses are necessary for optimal functionality of the root system in a heterogeneous moisture environment, allowing for efficient water uptake with minimal water loss during periods of drought. PMID:25617469

  20. Hyperforin production in Hypericum perforatum root cultures.

    PubMed

    Gaid, Mariam; Haas, Paul; Beuerle, Till; Scholl, Stephan; Beerhues, Ludger

    2016-03-20

    Extracts of the medicinal plant Hypericum perforatum are used to treat depression and skin irritation. A major API is hyperforin, characterized by sensitivity to light, oxygen and temperature. Total synthesis of hyperforin is challenging and its content in field-grown plants is variable. We have established in vitro cultures of auxin-induced roots, which are capable of producing hyperforin, as indicated by HPLC-DAD and ESI-MS analyses. The extraction yield and the productivity upon use of petroleum ether after solvent screening were ∼5 mg/g DW and ∼50 mg/L culture after six weeks of cultivation. The root cultures also contained secohyperforin and lupulones, which were not yet detected in intact plants. In contrast, they lacked another class of typical H. perforatum constituents, hypericins, as indicated by the analysis of methanolic extracts. Hyperforins and lupulones were stabilized and enriched as dicyclohexylammonium salts. Upon up-scaling of biomass production and downstream processing, H. perforatum root cultures may provide an alternative platform for the preparation of medicinal extracts and the isolation of APIs. PMID:26876610